HHsearch alignment for GI: 254780745 and conserved domain: COG5375
>COG5375 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=93.41 E-value=0.46 Score=24.20 Aligned_cols=122 Identities=15% Similarity=0.167 Sum_probs=74.6
Q ss_pred CCCCCEEEEEEEEEEECC-CCEEEEEE-EEEEEECC---EEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCCC
Q ss_conf 777847999116999923-88799980-08999787---599996899996176654442001222012220245-5653
Q gi|254780745|r 40 LGNEKIHIKADMLEVKDA-VQKAFFKG-NVFMTQED---FSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQS-GEIN 113 (181)
Q Consensus 40 d~~~Pi~I~AD~~~~d~~-~~~~~~~G-NV~i~qg~---~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~~-~~~~ 113 (181)
T Consensus 87 k~~~~ysitA~RAiqD~~n~~~i~Le~i~a~~pvg~~~~a~v~Ak~Gvyd~~~n---------tL~l~~dv~i~~~eGi~ 157 (216)
T COG5375 87 KDGRPYSITAERAIQDVKNPNIITLEGILAILPVGEDNPAQVTAKSGVYDRDTN---------TLDLTDDVKITTDEGIR 157 (216)
T ss_pred CCCCEEEEEHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCEEECCCC---------EEECCCCEEEECCHHHH
T ss_conf 789750330777765026887489960015524799973468712342666787---------13246876885354331
Q ss_pred EEEEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEECC
Q ss_conf 32112799416658999947863499971797699229999921658999928998099998118
Q gi|254780745|r 114 VIASNGYVDFQKRILVLNGDRADKVILKEKLNTFLGCKLIVNIDTSFASLQGCESDQVQSIIRYD 178 (181)
Q Consensus 114 ~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~~~i~gdki~yn~~tg~~~~~g~~~~rV~~i~~~~ 178 (181)
T Consensus 158 a~~~sA~vDl~~G~~--sg~~--pv~i~~~~gsI~ads~~v~D~G~iivF~g----~Vr~~id~s 214 (216)
T COG5375 158 ADFQSAFVDLRTGNM--SGDS--PVDISGKGGSITADSYSVTDKGKIIVFEG----NVRTRIDPS 214 (216)
T ss_pred CCCCHHEEEECCCCC--CCCC--CEEECCCCCCEEEEEEEEECCCCEEEEEC----CEEEEECCC
T ss_conf 356012466025610--2678--63330799848761367522884899956----568984477