HHsearch alignment for GI: 254780745 and conserved domain: PRK11397
>PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional.
Probab=92.72 E-value=0.33 Score=25.01 Aligned_cols=54 Identities=19% Similarity=0.127 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE-EEEECCCCEEEEEEEEEEE
Q ss_conf 9999999999999877743321000122445777847999116-9999238879998008999
Q gi|254780745|r 9 HLYIHLLALVFVLLKADLSQAAASYMTRFKVLGNEKIHIKADM-LEVKDAVQKAFFKGNVFMT 70 (181)
Q Consensus 9 ~~~~~~~~~l~~~~~~~~a~~~~~~~~~~~~d~~~Pi~I~AD~-~~~d~~~~~~~~~GNV~i~ 70 (181)
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~P~i~A~sailiD~~TG~vLy~kN~d~~ 60 (390)
T PRK11397 6 RLIIAASLFVFNLSSAFAAEN--------IPFSPQPPAIDAGSWVLMDYTTGQILTAGNEHQQ 60 (390)
T ss_pred HHHHHHHHHHHHHHHHHHCCC--------CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCC
T ss_conf 999999999999999874045--------7789999965533999999999969201292998