HHsearch alignment for GI: 254780745 and conserved domain: pfam06835
>pfam06835 DUF1239 Protein of unknown function (DUF1239). This family consists of several hypothetical bacterial proteins of around 190 residues in length. The function of this family is unknown.
Probab=98.62 E-value=9.4e-07 Score=55.04 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=45.5
Q ss_pred EEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEECC-----CEEE
Q ss_conf 59999689999617665444200122201222024556533211279941665899994786349997179-----7699
Q gi|254780745|r 74 FSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQSGEINVIASNGYVDFQKRILVLNGDRADKVILKEKL-----NTFL 148 (181)
Q Consensus 74 ~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~~~~~~~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~-----~~i~ 148 (181)
T Consensus 53 ~~l~a~~~~~~~~~~~~~l~~P~~~~~~~-----~~~~w~i~A~~g~~~~~~~~i~L~g~----V~i~~~~~~~~~~~l~ 123 (176)
T pfam06835 53 YRLTADKLEHYPDDDTTEFTNPVLIIYQD-----GKPPWTITADRAKLNKDGQTLYLYGN----VVIQSLEDKSRLTTIT 123 (176)
T ss_pred EEEEECEEEEECCCCCEEEEEEEEEEECC-----CCCEEEEEECEEEEECCCCEEEEECC----EEEEECCCCCCCEEEE
T ss_conf 99990457996589968999639999779-----98369999794999379969999899----9999768998756999
Q ss_pred EEEEEEEECCCEEEEE
Q ss_conf 2299999216589999
Q gi|254780745|r 149 GCKLIVNIDTSFASLQ 164 (181)
Q Consensus 149 gdki~yn~~tg~~~~~ 164 (181)
T Consensus 124 T~~l~~~~~~~~~~td 139 (176)
T pfam06835 124 TENLTVNLDTQDASTD 139 (176)
T ss_pred EHEEEEECCCCEEEEC
T ss_conf 2209999477799948