HHsearch results for GI: 254780745 and protein with PDBid: 3my2_A

>3my2_A Lipopolysaccharide export system protein LPTC; lipopolysaccharide export pathway, structural genomics scottish structural proteomics facility; 2.20A {Escherichia coli}
Probab=98.81  E-value=2.5e-07  Score=57.01  Aligned_cols=126  Identities=16%  Similarity=0.182  Sum_probs=99.2

Q ss_pred             CCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEE-E--CC--EEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf             4457778479991169999238879998008999-7--87--59999689999617665444200122201222024556
Q gi|254780745|r   37 FKVLGNEKIHIKADMLEVKDAVQKAFFKGNVFMT-Q--ED--FSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQSGE  111 (181)
Q Consensus        37 ~~~d~~~Pi~I~AD~~~~d~~~~~~~~~GNV~i~-q--g~--~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~~~~  111 (181)
                      +..+...-.+|+|++++.....+.+.+..-+... .  |.  ..|+||+..++ +.         ..+...|||.+....
T Consensus        36 ~d~~G~l~~~l~A~~~~~~~~~~~~~l~~P~~~~~~~~~~~~w~itA~~g~~~-~~---------~~l~L~gnV~i~~~~  105 (175)
T 3my2_A           36 YNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLT-ND---------RMLYLYGHVEVNALV  105 (175)
T ss_dssp             -------CEEEECSSEEEETTTTEEEEESCEEEEECTTCCEEEEEECSEEEEC-TT---------SEEEEEEEEEEEECS
T ss_pred             ECCCCCEEEEEECCHHEECCCCCCEEEECCEEEEECCCCCCEEEEEECEEEEC-CC---------CEEEEECEEEEEECC
T ss_conf             99999899999916314214889648825599997489982299993858987-99---------689996409999637


Q ss_pred             -----CCEEEEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEECCCC
Q ss_conf             -----533211279941665899994786349997179769922999992165899992899809999811876
Q gi|254780745|r  112 -----INVIASNGYVDFQKRILVLNGDRADKVILKEKLNTFLGCKLIVNIDTSFASLQGCESDQVQSIIRYDGR  180 (181)
Q Consensus       112 -----~~~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~~~i~gdki~yn~~tg~~~~~g~~~~rV~~i~~~~~r  180 (181)
                           ..+.++.+.|++.++.+.-.+.    |.+++++..++|..+.+|++++.+++.|    +|++.+.+.+|
T Consensus       106 ~~~~~~~l~T~~L~~~~~~~~~~td~~----V~i~~~~~~~~g~gm~~~l~~~~~~l~~----~Vk~~ye~~~~  171 (175)
T 3my2_A          106 PDSQLRRITTDNAQINLVTQDVTSEDL----VTLYGTTFNSSGLKMRGNLRSKNAELIE----KVRTSYEIQNK  171 (175)
T ss_dssp             SSCSEEEEEEEEEEEETTTCEEEEEEE----EEEEESSCEEEEEEEEEETTTTEEEEEE----EEEETTCC---
T ss_pred             CCCCCEEEEEEEEEEEECCCEEEECCC----EEEECCCCEEEEEEEEEECCCCEEEEEC----CEEEEEECCCC
T ss_conf             888746999815999915679994884----9999299699977899996389999940----62899928866