RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780745|ref|YP_003065158.1| OstA family protein [Candidatus Liberibacter asiaticus str. psy62] (181 letters) >d1hz6a_ d.15.7.1 (A:) Immunoglobulin light chain-binding domain of protein L {Peptostreptococcus magnus [TaxId: 1260]} Length = 67 Score = 25.4 bits (55), Expect = 3.0 Identities = 15/60 (25%), Positives = 29/60 (48%) Query: 43 EKIHIKADMLEVKDAVQKAFFKGNVFMTQEDFSLQADKMTIDYNNTNRDVSNKINRMDVE 102 E++ IKA+++ + Q A FKG + AD + D DV++K ++++ Sbjct: 5 EEVTIKANLIFANGSTQTAEFKGTFEKATSEAYAYADTLKKDNGEWTVDVADKGYTLNIK 64 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.323 0.137 0.378 Gapped Lambda K H 0.267 0.0605 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 613,853 Number of extensions: 26659 Number of successful extensions: 56 Number of sequences better than 10.0: 1 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 6 Length of query: 181 Length of database: 2,407,596 Length adjustment: 80 Effective length of query: 101 Effective length of database: 1,309,196 Effective search space: 132228796 Effective search space used: 132228796 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 50 (23.3 bits)