HHsearch alignment for GI: 254780746 and conserved domain: COG5375

Probab=100.00  E-value=1.9e-41  Score=253.17  Aligned_cols=195  Identities=22%  Similarity=0.330  Sum_probs=176.0

Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEEEECEEEEEECCCCCEEEEEEEEEE
Q ss_conf             3552010368899999999999999999876420034444-454431345543058711089988499888999960113
Q gi|254780746|r   13 QRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAK   91 (215)
Q Consensus        13 ~~~~~~r~Sr~V~~lKi~Lpl~al~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~m~~P~~~G~~~~g~~~~itA~~A~   91 (215)
T Consensus        21 ~y~~a~Rhs~rVr~Lki~lpl~a~~~a~~fi~~s~~rt~~~~~~~~~a~~~~gkivm~~P~f~G~nk~~~~ysitA~RAi  100 (216)
T COG5375          21 AYARARRHSRRVRRLKIGLPLAAGGLALAFIAQSVWRTPALAVSLETAEIETGKIVLKKPRFNGVNKDGRPYSITAERAI  100 (216)
T ss_pred             HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEHHHHH
T ss_conf             89998642121022201578998888875344443113677630032412357479706613256278975033077776


Q ss_pred             ECCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEEEEECCCCEEEEEEEEEEEEEEEEEECCC
Q ss_conf             35889874499995689998168845679999345899735646999777799951573999821279972038995385
Q gi|254780746|r   92 TSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDP  171 (215)
Q Consensus        92 ~~~~~~~~~i~L~~v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V~i~~~~G~~l~t~~~~~d~~~~~i~s~~~  171 (215)
T Consensus       101 qD~-~n~~~i~Le~i~a~~pvg~~~--~a~v~Ak~Gvyd~~~ntL~l~~dv~i~~~eGi~a~~~sA~vDl~~G~~sg~~p  177 (216)
T COG5375         101 QDV-KNPNIITLEGILAILPVGEDN--PAQVTAKSGVYDRDTNTLDLTDDVKITTDEGIRADFQSAFVDLRTGNMSGDSP  177 (216)
T ss_pred             HCC-CCCCEEEEEEEEEECCCCCCC--CEEEEECCCEEECCCCEEECCCCEEEECCHHHHCCCCHHEEEECCCCCCCCCC
T ss_conf             502-688748996001552479997--34687123426667871324687688535433135601246602561026786


Q ss_pred             EEEEECCCEEEEEEEEEEECCCEEEEECCEEEEECHHHH
Q ss_conf             899907718997079999278689998896999831132
Q gi|254780746|r  172 VIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPGVL  210 (215)
Q Consensus       172 V~~~~~~g~i~A~~m~i~~~~~~i~F~g~V~l~i~p~~~  210 (215)
T Consensus       178 v~i~~~~gsI~ads~~v~D~G~iivF~g~Vr~~id~s~~  216 (216)
T COG5375         178 VDISGKGGSITADSYSVTDKGKIIVFEGNVRTRIDPSDI  216 (216)
T ss_pred             EEECCCCCCEEEEEEEEECCCCEEEEECCEEEEECCCCC
T ss_conf             333079984876136752288489995656898447789