HHsearch alignment for GI: 254780746 and conserved domain: COG5375
>COG5375 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=93.89 E-value=0.41 Score=25.07 Aligned_cols=105 Identities=11% Similarity=0.027 Sum_probs=79.9
Q ss_pred EEEECEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEEEE
Q ss_conf 58711089988499888999960113358898744999956899981688456799993458997356469997777999
Q gi|254780746|r 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMK 145 (215)
Q Consensus 66 ~~m~~P~~~G~~~~g~~~~itA~~A~~~~~~~~~~i~L~~v~a~i~~~~g~~~~i~i~A~~G~y~~~~~~l~L~g~V~i~ 145 (215)
T Consensus 109 i~Le~i~a~~pvg~~~~a~v~Ak~Gvyd~--~~ntL~l~~dv-~i~~~eG----i~a~~~sA~vDl~~G~~sg~~pv~i~ 181 (216)
T COG5375 109 ITLEGILAILPVGEDNPAQVTAKSGVYDR--DTNTLDLTDDV-KITTDEG----IRADFQSAFVDLRTGNMSGDSPVDIS 181 (216)
T ss_pred EEEEEEEEECCCCCCCCEEEEECCCEEEC--CCCEEECCCCE-EEECCHH----HHCCCCHHEEEECCCCCCCCCCEEEC
T ss_conf 89960015524799973468712342666--78713246876-8853543----31356012466025610267863330
Q ss_pred ECCCCEEEEEEEEEEEEEEEEEECCCEEEEECC
Q ss_conf 515739998212799720389953858999077
Q gi|254780746|r 146 VKDNLRLDFETAVLDVKNITINSSDPVIITHSD 178 (215)
Q Consensus 146 ~~~G~~l~t~~~~~d~~~~~i~s~~~V~~~~~~ 178 (215)
T Consensus 182 ~~~g-sI~ads~~v~D~G~iivF~g~Vr~~id~ 213 (216)
T COG5375 182 GKGG-SITADSYSVTDKGKIIVFEGNVRTRIDP 213 (216)
T ss_pred CCCC-CEEEEEEEEECCCCEEEEECCEEEEECC
T ss_conf 7998-4876136752288489995656898447