HHsearch alignment for GI: 254780746 and conserved domain: TIGR03002
>TIGR03002 outer_YhbN cell envelope biogenesis protein YhbN; InterPro: IPR014340 Members of this entry include YhbN, which is an essential protein in Escherichia coli. It is implicated in cell envelope integrity, and has numerous homologues in other Proteobacteria in a conserved location near lipopolysaccharide inner core biosynthesis genes. This entry is distantly related to the organic solvent tolerance protein (OstA)..
Probab=98.00 E-value=0.00029 Score=42.90 Aligned_cols=123 Identities=7% Similarity=0.085 Sum_probs=81.6
Q ss_pred CCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEC--CCC---EEEEECC--EEEEE--C-
Q ss_conf 998889999601133588987449999568999816884567999934589973--564---6999777--79995--1-
Q gi|254780746|r 78 KDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL--ANH---TLYISQP--FKMKV--K- 147 (215)
Q Consensus 78 ~~g~~~~itA~~A~~~~~~~~~~i~L~~v~a~i~~~~g~~~~i~i~A~~G~y~~--~~~---~l~L~g~--V~i~~--~- 147 (215)
T Consensus 5 D~~qPi~I~Ad~~~~D~~~--~~~~f---~GnV~itQG~---~~I~ADkv~v~~~~~~~~~~~~~A~G~~PA~F~q~~d~ 76 (150)
T TIGR03002 5 DREQPIEIEADSQTLDDKK--NVVTF---TGNVVITQGT---LKIRADKVVVTRPNDGGGIEKATATGNKPATFRQKLDD 76 (150)
T ss_pred CCCCCEEEEEEEEEEECCC--CEEEE---ECCEEEEECC---EEEECCEEEEEECCCCCCEEEEEEECCCCEEEEEEECC
T ss_conf 7568689994006654028--83888---6565878297---59852288988268878608999980781898899559
Q ss_pred -CC-CEEEEEEEEEEEEEEEEEECCCEEEEECC-CEEEEEEEEEEECCCEEEE----E------CCEEEEECHH
Q ss_conf -57-39998212799720389953858999077-1899707999927868999----8------8969998311
Q gi|254780746|r 148 -DN-LRLDFETAVLDVKNITINSSDPVIITHSD-FVLSANFARIENSSRSAVF----A------GQVSVVVNPG 208 (215)
Q Consensus 148 -~G-~~l~t~~~~~d~~~~~i~s~~~V~~~~~~-g~i~A~~m~i~~~~~~i~F----~------g~V~l~i~p~ 208 (215)
T Consensus 77 g~~~~~g~A~~i~Y~~~~~~~~Ltg~A~v~Q~~k~~~~G~~I~Y~~~~q~~~a~~~~~~~~~~~~RV~~ii~P~ 150 (150)
T TIGR03002 77 GKEYIEGQANRIEYDPAKDTVVLTGNARVKQGGKNEVSGDVITYDTKKQKVTAKGGGGSAKGASGRVTTIIQPK 150 (150)
T ss_pred CCEEEEEECCEEEEECCCCEEEEECCEEEEECCCCEEECCEEEEECEEEEEEEEECCCCCCCCCCCEEEEEECC
T ss_conf 98279997118999325779999123499788977787668898440129989807888998697179998409