HHsearch alignment for GI: 254780746 and conserved domain: pfam03968

>pfam03968 OstA OstA-like protein. This family of proteins are mostly uncharacterized. However the family does include E. coli OstA that has been characterized as an organic solvent tolerance protein.

Probab=98.19  E-value=0.00036  Score=42.34  Aligned_cols=88  Identities=10%  Similarity=0.122  Sum_probs=39.4

Q ss_pred             EEEEEEEEEEEECCCCEEEEECCEEEEECCCCEEEEEEEEEEEEEE-----EEEECCCEEE------EECCCEEEEEEEE
Q ss_conf             7999934589973564699977779995157399982127997203-----8995385899------9077189970799
Q gi|254780746|r  119 DMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNI-----TINSSDPVII------THSDFVLSANFAR  187 (215)
Q Consensus       119 ~i~i~A~~G~y~~~~~~l~L~g~V~i~~~~G~~l~t~~~~~d~~~~-----~i~s~~~V~~------~~~~g~i~A~~m~  187 (215)
T Consensus        27 PI~I~AD~~~~d~~~~~~~~~GnV~i~QG~-~~i~ad~~~i~~~~~~~~~~~~~a~g~~~~~~~~~~~~~~~~a~a~~~~  105 (141)
T pfam03968        27 PIEIEADNLEADDKKGVATFTGNVVVTQGS-ITLRADKVVVTQDKKSNGIERLEATGPATFRQKVDLVGRQIRGTADRAE  105 (141)
T ss_pred             CEEEEEEEEEEECCCCEEEEECCEEEEECC-EEEEEEEEEEEECCCCCCEEEEEEECCEEEEEEEECCCCCEEEEEEEEE
T ss_conf             989994579998279999998749998087-0999648999986888967999997760499986148886799971899


Q ss_pred             EEECCCEEEEECCEEEEECH
Q ss_conf             99278689998896999831
Q gi|254780746|r  188 IENSSRSAVFAGQVSVVVNP  207 (215)
Q Consensus       188 i~~~~~~i~F~g~V~l~i~p  207 (215)
T Consensus       106 Y~~~~~~i~L~Gna~l~q~~  125 (141)
T pfam03968       106 YDSKKRIIVLTGNAVLTQGG  125 (141)
T ss_pred             EEECCCEEEEECCEEEEECC
T ss_conf             99169999997339999899