BLAST/PSIBLAST alignment of GI: 254780746 and GI: 116250188 at iteration 1
>gi|116250188|ref|YP_766026.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 221
>gi|115254836|emb|CAK05910.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 221
 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 5/196 (2%)

Query: 20  HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDYS 77
           H   ++ LK   P A + I       + + I       ++    E   ++M+K  +S  +
Sbjct: 27  HSARVRRLKILLPVAALIIAASLTAVALVSIYLPENVKMEGAKIENGKVVMEKPAISGRN 86

Query: 78  KDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLY 137
            D + YS++AERA     +   +I L+  +  VP          + A +A +N     L+
Sbjct: 87  SDGINYSMLAERALQDIRN-PNLITLETIKAAVPMNDGLIA--RVVASTADYNRTTDNLH 143

Query: 138 ISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
           ++ PF + +   L  +F++A LD+K   + S DPV IT  +  + A   +I +  R   F
Sbjct: 144 MTAPFTLVLSSGLNANFQSAELDIKGGNMRSDDPVTITKDNASIVAKTLQITDKGRVITF 203

Query: 198 AGQVSVVVNPGVLQKK 213
            G V + V+P  + K+
Sbjct: 204 EGNVRMNVDPSTIHKQ 219