BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780746|ref|YP_003065159.1| hypothetical protein
CLIBASIA_03165 [Candidatus Liberibacter asiaticus str. psy62]
(215 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780746|ref|YP_003065159.1| hypothetical protein CLIBASIA_03165 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040423|gb|ACT57219.1| hypothetical protein CLIBASIA_03165 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 215
Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL 60
MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL
Sbjct: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL 60
Query: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM
Sbjct: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV
Sbjct: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
Query: 181 LSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
LSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN
Sbjct: 181 LSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
>gi|315121909|ref|YP_004062398.1| hypothetical protein CKC_00795 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495311|gb|ADR51910.1| hypothetical protein CKC_00795 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 215
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 4/214 (1%)
Query: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL 60
M+ LDRR K+LLQR KY QH + I+FLKFF P +V ++ W SSW+RI FSK + D
Sbjct: 4 MNELDRREKLLLQRKKYNQHFKLIRFLKFFLPTLSVVLLSWLFFSSWVRIKHFSKPAADF 63
Query: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
L+FE M++ KFILSDYS+D+ +YSL A+RA+ + K I LQD EL +P Y +M
Sbjct: 64 LNFEFMVINKFILSDYSRDKKRYSLSAKRAQDN-EGSKNTILLQDLELVMPI--PGYDEM 120
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDN-LRLDFETAVLDVKNITINSSDPVIITHSDF 179
L A+ A F+L + L I PFK+ +N +L F+TAV+D+K I +NSSD V T S F
Sbjct: 121 RLLANYASFDLYRNMLNIQHPFKIIFNNNDTQLYFKTAVMDIKKIVLNSSDAVKFTSSTF 180
Query: 180 VLSANFARIENSSRSAVFAGQVSVVVNPGVLQKK 213
LSA IEN + A+F+G VSVV++P +L KK
Sbjct: 181 TLSAQSCSIENDQKRAIFSGDVSVVIHPKILHKK 214
>gi|86356058|ref|YP_467950.1| hypothetical protein RHE_CH00401 [Rhizobium etli CFN 42]
gi|86280160|gb|ABC89223.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 221
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL----LDFEPM 66
RS Y H ++ LK P A + + G L++ +S + ++ ++ +
Sbjct: 18 RSPYGDALFHSARVRRLKILLPLAALIVAGA--LATVALVSLYLPENVKFEGAKIENGKV 75
Query: 67 IMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHS 126
+M+K ++ + D V YS++AERA + +I L+ + VP + A +
Sbjct: 76 VMEKPAIAGRNSDGVNYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVIAST 132
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA 186
A +N A L+++ PF + + L F++A LD+K + S DPV IT + + A
Sbjct: 133 ADYNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTL 192
Query: 187 RIENSSRSAVFAGQVSVVVNPGVLQKK 213
I + R F G V + V+P + K+
Sbjct: 193 EITDKGRVITFEGNVRMNVDPSTIHKQ 219
>gi|241202815|ref|YP_002973911.1| hypothetical protein Rleg_0061 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856705|gb|ACS54372.1| protein of unknown function DUF1239 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 221
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL----LDFEPMIMKKFILSD 75
H ++ LK P A + + L++ +S + +I + ++ ++M+K +S
Sbjct: 27 HSARVRRLKILLPVAALIVAAS--LTAVALVSIYLPENIKMEGAKIENGKVVMEKPAISG 84
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ D + YS++AERA + +I L+ + VP + A +A +N A
Sbjct: 85 RNSDGINYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVVASTADYNRATDN 141
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
L+++ PF + + L +F++A LD+K + S DPV IT + + A +I + R
Sbjct: 142 LHMTAPFTLVLSSGLNANFQSAQLDIKGGNMRSDDPVTITKDNASIVAKTLQITDKGRVI 201
Query: 196 VFAGQVSVVVNPGVLQKK 213
F G V + V+P + K+
Sbjct: 202 TFEGNVRMNVDPSTIHKQ 219
>gi|222084666|ref|YP_002543195.1| hypothetical protein Arad_0623 [Agrobacterium radiobacter K84]
gi|221722114|gb|ACM25270.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 228
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 12 LQRSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PM 66
L+R+ Y+ H ++ LK F P A + + F+ S +R I+ E +
Sbjct: 16 LERNAYKDAIFHSTRVRKLKLFLPLAALIVSLIFIAVSLVRAYLPENIQIEGARIEDGKV 75
Query: 67 IMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHS 126
+M++ ++ +KD + YS++AE+A + +I L+ + ++P ++ A S
Sbjct: 76 VMERPAIAGRNKDGINYSMLAEKALQDIKN-PNMITLKSIKASMPVNSDVIA--HVTAES 132
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA 186
A F+ TL ++ PF + + + LR +F TA LDVK ++S D V I + A
Sbjct: 133 ADFDRQADTLKLTDPFTILMDNGLRAEFRTAFLDVKKGDLSSQDQVAIYRGGMSVVAQSL 192
Query: 187 RIENSSRSAVFAGQVSVVVNPGVLQKK 213
++ + F GQV + ++P L K
Sbjct: 193 KMTDKGSVIEFDGQVRMNIDPTTLHNK 219
>gi|116250188|ref|YP_766026.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254836|emb|CAK05910.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 221
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDYS 77
H ++ LK P A + I + + I ++ E ++M+K +S +
Sbjct: 27 HSARVRRLKILLPVAALIIAASLTAVALVSIYLPENVKMEGAKIENGKVVMEKPAISGRN 86
Query: 78 KDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLY 137
D + YS++AERA + +I L+ + VP + A +A +N L+
Sbjct: 87 SDGINYSMLAERALQDIRN-PNLITLETIKAAVPMNDGLIA--RVVASTADYNRTTDNLH 143
Query: 138 ISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
++ PF + + L +F++A LD+K + S DPV IT + + A +I + R F
Sbjct: 144 MTAPFTLVLSSGLNANFQSAELDIKGGNMRSDDPVTITKDNASIVAKTLQITDKGRVITF 203
Query: 198 AGQVSVVVNPGVLQKK 213
G V + V+P + K+
Sbjct: 204 EGNVRMNVDPSTIHKQ 219
>gi|163757834|ref|ZP_02164923.1| hypothetical protein HPDFL43_20527 [Hoeflea phototrophica DFL-43]
gi|162285336|gb|EDQ35618.1| hypothetical protein HPDFL43_20527 [Hoeflea phototrophica DFL-43]
Length = 226
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 15 SKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRI---STFSKSSIDLLDFEPMIM 68
++YR+ H R ++ LK P A+V +V F+ S++ + S+ + D + ++M
Sbjct: 21 AEYRRAQTHSRRVRALKILLPLASVLVVIGFVAVSFVDTLVPEGVAIESVAVRDGK-LVM 79
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+ ++S + D Y L A RA + +I L+D +P E L A SA
Sbjct: 80 QNPVMSGQTSDARSYRLEALRAIQDLAT-PDVIVLEDILAELPVSAGETA--VLEATSAT 136
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
F+ TL +PFK++ + + ++A +D+ +++SDPV I + + A ++
Sbjct: 137 FDRGAQTLVFREPFKVQSEGGFSAEMQSADIDMATSEMSTSDPVTIRSGEASVVAKSMKM 196
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQK 212
++ R + QV + +NP +++
Sbjct: 197 QDKGRLIILENQVRMTINPSAIKQ 220
>gi|190890073|ref|YP_001976615.1| hypothetical protein RHECIAT_CH0000443 [Rhizobium etli CIAT 652]
gi|190695352|gb|ACE89437.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327193443|gb|EGE60341.1| hypothetical protein RHECNPAF_159006 [Rhizobium etli CNPAF512]
Length = 221
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
RS Y H ++ LK P A + + + + I + E ++M
Sbjct: 18 RSAYGDALFHSARVRRLKILLPVAALIVAAGLTAVALVSIYLPENVKFEGAKIENGKVVM 77
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K ++ + D + YS++AERA + +I L+ + VP + A +A
Sbjct: 78 EKPAIAGRNSDGINYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVVASTAD 134
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A I
Sbjct: 135 YNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLEI 194
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKK 213
+ R F G V + V+P + K+
Sbjct: 195 TDKGRVITFEGNVRMNVDPSTIHKQ 219
>gi|218458734|ref|ZP_03498825.1| hypothetical protein RetlK5_04413 [Rhizobium etli Kim 5]
Length = 231
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 8/205 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
RS Y H ++ LK P A + + + + I + E ++M
Sbjct: 28 RSAYGDALFHSARVRRLKILLPVAALIVAAGLTAVALVSIYLPENVKFEGAKIENGKVVM 87
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K ++ + D + YS++AERA + I L+ + VP + A +A
Sbjct: 88 EKPAIAGRNSDGINYSMLAERALQDIRN-PDFITLETIKAAVPMNDGLIA--RVVASTAD 144
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A I
Sbjct: 145 YNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLEI 204
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKK 213
+ R F G V + V+P + K+
Sbjct: 205 TDKGRVITFEGNVRMNVDPSTIHKQ 229
>gi|209547657|ref|YP_002279574.1| hypothetical protein Rleg2_0045 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533413|gb|ACI53348.1| protein of unknown function DUF1239 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 221
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
++M+K ++ + D + YS++AERA + +I L+ + VP + A
Sbjct: 75 VVMEKPAIAGRNSDGINYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVVAS 131
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+A +N A L+++ PF + + L +F++A LD+K + S DPV IT + + A
Sbjct: 132 TADYNRATDNLHMTAPFTLVLSSGLNANFQSARLDIKGGNMRSDDPVTITKDNASIVAKT 191
Query: 186 ARIENSSRSAVFAGQVSVVVNPGVLQKK 213
+I + R F G V + V+P + K+
Sbjct: 192 LQITDKGRVITFEGNVRMNVDPSTIHKQ 219
>gi|260460502|ref|ZP_05808753.1| protein of unknown function DUF1239 [Mesorhizobium opportunistum
WSM2075]
gi|259033607|gb|EEW34867.1| protein of unknown function DUF1239 [Mesorhizobium opportunistum
WSM2075]
Length = 237
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR--ISTFSKSSIDLLDFEPMIMKKFIL 73
+ ++H R ++ LKF P A I F + S++ +S ++ ++M L
Sbjct: 30 RAQRHSRRVRVLKFAVPLAAALIAVAFPVYSYLAAPVSVAVQAEGTAFSNGKLVMANPKL 89
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++K + YS+ A RA ++ +GII L+ + VP + A ++
Sbjct: 90 NGFTKLKQPYSMTALRAIQDVST-QGIIELEGIDAKVPIAPDNVA--AVKASHGTYDRDG 146
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+T+ ++ + D L+ F++ LD+ T+ + DPV ++ ++A+ ++++ +
Sbjct: 147 NTMKLNSDVTITTTDGLQAKFKSVFLDMGKGTMKTDDPVDVSRGGSQITADSMSVQDNGK 206
Query: 194 SAVFAGQVSVVVNPGVLQKKE 214
VF +V V ++P L+ E
Sbjct: 207 VLVFENKVRVNIDPAALKAAE 227
>gi|13472791|ref|NP_104358.1| hypothetical protein mll3200 [Mesorhizobium loti MAFF303099]
gi|14023538|dbj|BAB50144.1| mll3200 [Mesorhizobium loti MAFF303099]
Length = 237
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR--ISTFSKSSIDLLDFEPMIMKKFIL 73
+ ++H R ++ LKF P A I F + S++ +S +S ++M L
Sbjct: 30 RAQRHSRRVRVLKFAVPLAAGLIAVAFPVYSYLAAPVSVAVQSEGAAFSNGKLVMANPKL 89
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++K + YS+ A RA N+ +GII L+ + VP + A ++
Sbjct: 90 NGFTKQKQPYSMTALRAIQDVNT-QGIIELEGIDAKVPVGPDNVA--AIKASHGIYDRDG 146
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+T+ ++ + D ++ F++ LD+ T+ + DPV ++ ++A+ ++++ +
Sbjct: 147 NTMKMTSDVMITTTDGMQAKFKSVFLDMGKGTMKTDDPVDVSSGGSQITADSLSVQDNGK 206
Query: 194 SAVFAGQVSVVVNPGVLQKKE 214
VF +V V ++P ++ E
Sbjct: 207 ILVFEKRVRVNIDPASVKAAE 227
>gi|15887686|ref|NP_353367.1| hypothetical protein Atu0335 [Agrobacterium tumefaciens str. C58]
gi|15155241|gb|AAK86152.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 235
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDY 76
+H ++ LK P + I F+ S IR K S++ E ++M+K ++
Sbjct: 41 RHSARVKRLKIILPLSAAIISLAFIAVSVIRTWAPEKVSLESARIEDGKIVMEKPAVAGR 100
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
++ + YS+ A+RA + ++ L+ VP S + A F+ + +TL
Sbjct: 101 NEKGIDYSMNADRALQDI-ANPNLMTLEKVLAAVPVNDSVA---QVIAQEGIFDRSTNTL 156
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
++ PF + + + ++ F++A +D+K ++S +PV I +D + A I ++ ++
Sbjct: 157 KMTAPFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKTIT 216
Query: 197 FAGQV 201
F+GQV
Sbjct: 217 FSGQV 221
>gi|325291770|ref|YP_004277634.1| hypothetical protein AGROH133_03501 [Agrobacterium sp. H13-3]
gi|325059623|gb|ADY63314.1| hypothetical protein AGROH133_03501 [Agrobacterium sp. H13-3]
Length = 221
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 13 QRSKYRQHVRF---IQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMI 67
Q Y + +R ++ LK P I F+ S IR + S++ E ++
Sbjct: 18 QNGAYERALRHSARVKRLKIILPLGAAIISFAFVAVSLIRTWAPEEVSLESARIEDGKIV 77
Query: 68 MKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSA 127
M+K ++ ++ + YS+ A+RA + ++ L+ VP S + A
Sbjct: 78 MEKPAVAGRNEKGIDYSMNADRALQDI-ANPNLMTLERVLAAVPVNDSVA---QVIAKEG 133
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
F+ A +TL ++ PF + + + ++ F++A +D+K ++S +PV I +D + A
Sbjct: 134 IFDRATNTLKMTAPFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGAIVAQSID 193
Query: 188 IENSSRSAVFAGQV 201
I ++ ++ F+GQV
Sbjct: 194 IADNGKTITFSGQV 207
>gi|227820607|ref|YP_002824577.1| hypothetical protein, putative transmembrane protein [Sinorhizobium
fredii NGR234]
gi|227339606|gb|ACP23824.1| hypothetical protein, putative transmembrane protein [Sinorhizobium
fredii NGR234]
Length = 239
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL----LDFEPMIMKKFILS 74
+H ++ LK PFA I F S++R F + L ++ ++M+ +S
Sbjct: 44 RHSARVKRLKIVLPFAAGVIALVFAAISFVR--AFLPEDLQLETATIENGKIVMQNPAIS 101
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
++ + YS+ A+RA + II L+ +P + + A S ++ +
Sbjct: 102 GRNRQDISYSMKAQRALQDI-ANPDIITLEQIHAEMPVNDTLVA--TVDATSGIYDRGAN 158
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
TL ++ PF + + + + DF++A LD+ + + P+ I+ + + A R+ + R
Sbjct: 159 TLDMNAPFTISMNNGVNADFQSAYLDIDAGEMETKHPIAISMNGGSIIAQSLRMTDKGRI 218
Query: 195 AVFAGQVSVVVNPGVLQK 212
F G V V V P ++K
Sbjct: 219 VTFEGMVRVNVEPSAIRK 236
>gi|163867320|ref|YP_001608514.1| hypothetical protein Btr_0015 [Bartonella tribocorum CIP 105476]
gi|161016961|emb|CAK00519.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 215
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILS- 74
K QH R I LK F P + + F ++ + + + I L + E +M IL+
Sbjct: 22 KASQHSRRISLLKIFLPLSALVSALIFCWFTFFSVPHVTSNPIPLNNEESEVMNLTILNP 81
Query: 75 ---DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
Y++ Y L AE+A ++ GII LQ+ +T + ++L A ++
Sbjct: 82 KLEGYTRAHEPYWLKAEKAFQD-HTRSGIIGLQN--ITAKASMGQQRQIFLAAQGGVYDN 138
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
N L + +PF + D + F +A +++ + + V I + F L+AN +I
Sbjct: 139 INGFLQLDKPFTITTNDGMMAQFMSADINLSEGQLKTDQYVNIQRAGFHLAANALQIREK 198
Query: 192 SRSAVFAGQVSVVV 205
++ F G V +V+
Sbjct: 199 GKNMYFHGGVHLVL 212
>gi|319407889|emb|CBI81541.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 214
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL------DFEPMIMK 69
K H I+ LK F P + I L+ SW + S SS ++ + +IM
Sbjct: 22 KAYHHSCRIRLLKIFLPLVALIIA---LVFSWFIFFSLSASSGSVVLKNEDDEIVKLIMV 78
Query: 70 KFILSDYSKDRVKYSLVAERA-KTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
L Y+ Y L A+ A + S +S ++ LQ +P+ + G +L A S
Sbjct: 79 NPRLESYTSSHKLYWLEAQEAFQDSLHSE--VVGLQGITAEIPSGK--LGTAFLQAQSGT 134
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
++ N+ L + +PF +K +DN+ F A +D+ + + V I + L AN +I
Sbjct: 135 YDHINNHLKLDKPFTVKTQDNMVAQFIAADIDLSESQLKTDQCVHIKRAGLSLKANTLQI 194
Query: 189 ENSSRSAVFAGQVSVVVN 206
+ F G V +V++
Sbjct: 195 HEKGQKIYFQGDVHLVID 212
>gi|319781469|ref|YP_004140945.1| hypothetical protein Mesci_1740 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167357|gb|ADV10895.1| protein of unknown function DUF1239 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 237
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFIL 73
+ ++H R ++ LKF P A I F + S++ K + F ++M L
Sbjct: 30 RAQRHSRRVRVLKFAVPVAAALIAVAFPVYSYLAAPVSVKIQAEGTAFSNGKLVMANPKL 89
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++K + YS+ A RA ++ +GII L+ + VP + A ++
Sbjct: 90 NGFTKQKQPYSMTALRAIQDVST-QGIIELEGIDAKVPIASDNVA--AVKASHGTYDRDG 146
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+T+ ++ + D ++ F++ LD+ T+ + DPV ++ ++A+ ++++ +
Sbjct: 147 NTMNLTSDVTITTTDGMQAKFKSVFLDMGKGTMKTGDPVDVSRGGSRITADTMSVQDNGK 206
Query: 194 SAVFAGQVSVVVNPGVLQKKEN 215
VF +V V ++ L+ +
Sbjct: 207 ILVFENKVRVNIDSAALKAAQG 228
>gi|121602696|ref|YP_989617.1| hypothetical protein BARBAKC583_1370 [Bartonella bacilliformis
KC583]
gi|120614873|gb|ABM45474.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 214
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKFILSD 75
H R+I LK F PF I F ++ +ST S ++ L + E + M L
Sbjct: 26 HSRWIHVLKIFLPFFAFIIALVFCWFTFFSVST-SFETVILNNGEDGITALTMVDPRLEG 84
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
Y+ Y L AE+A + G++ L++ VP S+ ++L A ++ +N
Sbjct: 85 YTSSNQPYQLKAEKAFQD-HMRLGVVELENITAEVPA--SKQVSVFLQAQRGIYDNSNTH 141
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
L +++PF MK KD L F A +++ + + V I ++DF L+A R+ +
Sbjct: 142 LQLNKPFTMKTKDGLVAQFMAADINLSEGQLKTDQRVDIYNADFSLTAGNLRVCEKGQIM 201
Query: 196 VFAGQVSVVVN 206
F G V ++++
Sbjct: 202 HFQGGVHLLIS 212
>gi|110635995|ref|YP_676203.1| hypothetical protein Meso_3670 [Mesorhizobium sp. BNC1]
gi|110286979|gb|ABG65038.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 235
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP--MIMKKFI 72
++ +H R ++ LKF P V I G FL S I + ++D E ++M
Sbjct: 28 ARAARHSRRVRVLKFVLPAVAVAISGLFLGYSLIAPTGIHALNLDSATIEGGSLVMHNPS 87
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ ++ + YS+ A A+ + G I L+ + T+P + A FN A
Sbjct: 88 LNGFTSGNLPYSVTAALARQEVGADSGPIELEKIQATLPIDSGRQ--ALVTAGGGVFNQA 145
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVII 174
+ L ++ ++ + ++A +D+ + +++ +PV I
Sbjct: 146 TNQLLLNNAITVESNAGISAQLKSAAVDMSSGNLSTDEPVDI 187
>gi|150395246|ref|YP_001325713.1| hypothetical protein Smed_0018 [Sinorhizobium medicae WSM419]
gi|150026761|gb|ABR58878.1| protein of unknown function DUF1239 [Sinorhizobium medicae WSM419]
Length = 222
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDY 76
+H ++ LK P I F S++R + ++ E ++M+ +S
Sbjct: 27 RHSARVKRLKVILPLIAGLIALVFAAVSFVRAFLPEELQLETATIENGKIVMQNPAISGR 86
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+K + YS+ A+RA + II L+ +P + + A S ++ +TL
Sbjct: 87 NKQDISYSMKAQRALQDI-ANPNIITLETIHAEMPVNDTLIA--TVDAQSGVYDRGANTL 143
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
++ PF + + + + DF++A LD+ + + P+ I+ + + A R+ + R
Sbjct: 144 DMNAPFTISMNNGVIADFQSAYLDINAGEMETKHPIAISMTGGSIIAQKLRMTDKGRVVT 203
Query: 197 FAGQVSVVVNPGVLQK 212
F G V V + P ++K
Sbjct: 204 FEGMVRVNIEPSAIRK 219
>gi|90420562|ref|ZP_01228469.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335290|gb|EAS49043.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 260
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 15 SKYRQHVRFIQFLKFFFP-FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP--MIMKKF 71
++ R+H R ++ LK P A + +VG ++ W+ S S++ E ++M+
Sbjct: 56 ARARRHSRLVRILKIGLPALAAIIVVGGIAVT-WVARSLPEDFSVNGTSIEDGRIVMQDP 114
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+S Y LVAERA + G G + L+ + D+ A S +++
Sbjct: 115 RMSGIDGKNRPYELVAERAIQAL--GGGGVDLETIAAKIAIDDEISADIK--AASGKYDP 170
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
TL ++ ++ + + + A +D+ + + PV I + + A+ + N
Sbjct: 171 TAETLVLAGGVRVATTNGITISLSAADIDIASGALKGEGPVRIETPEQTIEASSLNLTNG 230
Query: 192 SRSAVFAGQVSVVVNP 207
F G+V +++ P
Sbjct: 231 GDVITFGGRVKMLLRP 246
>gi|254709304|ref|ZP_05171115.1| hypothetical protein BpinB_03361 [Brucella pinnipedialis B2/94]
gi|256030827|ref|ZP_05444441.1| hypothetical protein BpinM2_09278 [Brucella pinnipedialis
M292/94/1]
gi|256158852|ref|ZP_05456709.1| hypothetical protein BcetM4_08193 [Brucella ceti M490/95/1]
gi|256254233|ref|ZP_05459769.1| hypothetical protein BcetB_08050 [Brucella ceti B1/94]
gi|260169731|ref|ZP_05756542.1| hypothetical protein BruF5_15498 [Brucella sp. F5/99]
gi|261221382|ref|ZP_05935663.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261316813|ref|ZP_05956010.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261759269|ref|ZP_06002978.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987882|ref|ZP_06100439.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997343|ref|ZP_06109900.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919966|gb|EEX86619.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261296036|gb|EEX99532.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261739253|gb|EEY27249.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262551811|gb|EEZ07801.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660079|gb|EEZ30340.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 240
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW SS+ + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASSVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|225626694|ref|ZP_03784733.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225618351|gb|EEH15394.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 255
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW SS+ + + ++MK
Sbjct: 56 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASSVKVEVNTGGETGKLVMKSPH 111
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 112 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 168
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 169 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 228
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 229 KVLIFENNVHMTVDGNTL 246
>gi|15964137|ref|NP_384490.1| hypothetical protein SMc01136 [Sinorhizobium meliloti 1021]
gi|307301282|ref|ZP_07581044.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307317953|ref|ZP_07597390.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073313|emb|CAC41821.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896355|gb|EFN27104.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306903738|gb|EFN34325.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 222
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDY 76
+H ++ LK P + F+ S++R + ++ E ++M+ +S
Sbjct: 27 RHSARVRRLKVMLPLIAGAVALIFVTVSFVRAFLPEELQLETATIENGKIVMQNPAISGR 86
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+K + YS+ A+RA + +I L+ +P + + A S ++ +TL
Sbjct: 87 NKQDISYSMKAQRALQDI-ANPNLITLETIHAEMPVNDTLIA--TVDATSGIYDRGANTL 143
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
++ PF + + + + DF++A LD+ + + P+ I+ + A R+ + R
Sbjct: 144 DMNAPFTISMNNGVNADFQSAYLDINAGEMETKHPIAISMKGGSIIAQKLRMTDKGRVVT 203
Query: 197 FAGQVSVVVNPGVLQK 212
F G V V + P ++K
Sbjct: 204 FEGMVRVNIEPSAIRK 219
>gi|254708605|ref|ZP_05170433.1| hypothetical protein BpinM_17082 [Brucella pinnipedialis
M163/99/10]
Length = 226
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW SS+ + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASSVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVV 205
+ +F V + V
Sbjct: 214 KVLIFENNVHMTV 226
>gi|261316111|ref|ZP_05955308.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261305137|gb|EEY08634.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 241
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW SS+ + + ++MK
Sbjct: 56 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASSVKVEVNTGGETGKLVMKSPH 111
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 112 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 168
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 169 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 228
Query: 193 RSAVFAGQVSVVV 205
+ +F V + V
Sbjct: 229 KVLIFENNVHMTV 241
>gi|218672975|ref|ZP_03522644.1| hypothetical protein RetlG_15795 [Rhizobium etli GR56]
Length = 111
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVL 181
+ A +A +N A L+++ PF + + L F++A LD+K + S DPV IT + +
Sbjct: 18 VVASTADYNRATDNLHMTAPFTLVLSSGLNAKFQSARLDIKGGNMRSDDPVTITKDNASI 77
Query: 182 SANFARIENSSRSAVFAGQVSVVVNPGVLQKK 213
A I + R F G V + V+P + K+
Sbjct: 78 VAKTLEITDKGRVITFEGNVRMNVDPSTIHKQ 109
>gi|161618143|ref|YP_001592030.1| hypothetical protein BCAN_A0160 [Brucella canis ATCC 23365]
gi|260567207|ref|ZP_05837677.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161334954|gb|ABX61259.1| protein of unknown function DUF1239 [Brucella canis ATCC 23365]
gi|260156725|gb|EEW91805.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 240
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
++H ++ LK P A + + F SW S + + + ++MK
Sbjct: 40 QRHSVCVRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|294851555|ref|ZP_06792228.1| hypothetical protein BAZG_00463 [Brucella sp. NVSL 07-0026]
gi|294820144|gb|EFG37143.1| hypothetical protein BAZG_00463 [Brucella sp. NVSL 07-0026]
Length = 250
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 51 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 106
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 107 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 163
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 164 NGRLQLDKDFTVTTDNGLRAQLHSAEVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 223
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 224 KVLIFENNVHMTVDGNTL 241
>gi|23501066|ref|NP_697193.1| hypothetical protein BR0155 [Brucella suis 1330]
gi|62289131|ref|YP_220924.1| hypothetical protein BruAb1_0151 [Brucella abortus bv. 1 str.
9-941]
gi|82699070|ref|YP_413644.1| hypothetical protein BAB1_0154 [Brucella melitensis biovar Abortus
2308]
gi|256368619|ref|YP_003106125.1| hypothetical protein BMI_I158 [Brucella microti CCM 4915]
gi|23346933|gb|AAN29108.1| conserved hypothetical protein [Brucella suis 1330]
gi|62195263|gb|AAX73563.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615171|emb|CAJ10110.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|255998777|gb|ACU47176.1| hypothetical protein BMI_I158 [Brucella microti CCM 4915]
Length = 217
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 18 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 73
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 74 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 130
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 131 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 190
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 191 KVLIFENNVHMTVDGNTL 208
>gi|256112660|ref|ZP_05453581.1| hypothetical protein Bmelb3E_08255 [Brucella melitensis bv. 3 str.
Ether]
gi|265994100|ref|ZP_06106657.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765081|gb|EEZ11002.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 240
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|163842425|ref|YP_001626829.1| hypothetical protein BSUIS_A0156 [Brucella suis ATCC 23445]
gi|163673148|gb|ABY37259.1| protein of unknown function DUF1239 [Brucella suis ATCC 23445]
Length = 240
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|297247547|ref|ZP_06931265.1| hypothetical protein BAYG_00458 [Brucella abortus bv. 5 str. B3196]
gi|297174716|gb|EFH34063.1| hypothetical protein BAYG_00458 [Brucella abortus bv. 5 str. B3196]
Length = 250
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 51 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 106
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 107 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 163
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 164 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 223
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 224 KVLIFENNVHMTVDGNTL 241
>gi|254718371|ref|ZP_05180182.1| hypothetical protein Bru83_02283 [Brucella sp. 83/13]
gi|265983332|ref|ZP_06096067.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839602|ref|ZP_07472406.1| protein of unknown function DUF1239 [Brucella sp. NF 2653]
gi|264661924|gb|EEZ32185.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405300|gb|EFM61575.1| protein of unknown function DUF1239 [Brucella sp. NF 2653]
Length = 240
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|306844423|ref|ZP_07477013.1| protein of unknown function DUF1239 [Brucella sp. BO1]
gi|306275236|gb|EFM56986.1| protein of unknown function DUF1239 [Brucella sp. BO1]
Length = 240
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|189023407|ref|YP_001934175.1| hypothetical protein BAbS19_I01470 [Brucella abortus S19]
gi|254690459|ref|ZP_05153713.1| hypothetical protein Babob68_09884 [Brucella abortus bv. 6 str.
870]
gi|254694948|ref|ZP_05156776.1| hypothetical protein Babob3T_09882 [Brucella abortus bv. 3 str.
Tulya]
gi|254696579|ref|ZP_05158407.1| hypothetical protein Babob28_02380 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700964|ref|ZP_05162792.1| hypothetical protein Bsuib55_08914 [Brucella suis bv. 5 str. 513]
gi|254705334|ref|ZP_05167162.1| hypothetical protein Bsuib36_15718 [Brucella suis bv. 3 str. 686]
gi|254731492|ref|ZP_05190070.1| hypothetical protein Babob42_09909 [Brucella abortus bv. 4 str.
292]
gi|256060297|ref|ZP_05450470.1| hypothetical protein Bneo5_08035 [Brucella neotomae 5K33]
gi|256258715|ref|ZP_05464251.1| hypothetical protein Babob9C_15481 [Brucella abortus bv. 9 str.
C68]
gi|260546429|ref|ZP_05822169.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260756011|ref|ZP_05868359.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759235|ref|ZP_05871583.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760957|ref|ZP_05873300.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260885031|ref|ZP_05896645.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215287|ref|ZP_05929568.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261324269|ref|ZP_05963466.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751482|ref|ZP_05995191.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261756045|ref|ZP_05999754.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|189018979|gb|ACD71701.1| hypothetical protein BAbS19_I01470 [Brucella abortus S19]
gi|260096536|gb|EEW80412.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669553|gb|EEX56493.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671389|gb|EEX58210.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676119|gb|EEX62940.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874559|gb|EEX81628.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916894|gb|EEX83755.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261300249|gb|EEY03746.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261741235|gb|EEY29161.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745798|gb|EEY33724.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 240
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|237814625|ref|ZP_04593623.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237789462|gb|EEP63672.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 255
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 56 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 111
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 112 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 168
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 169 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 228
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 229 KVLIFENNVHMTVDGNTL 246
>gi|148559427|ref|YP_001258188.1| hypothetical protein BOV_0150 [Brucella ovis ATCC 25840]
gi|148370684|gb|ABQ60663.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 255
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 56 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 111
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 112 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 168
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 169 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 228
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 229 KVLIFENNVHMTVDGNTL 246
>gi|306842558|ref|ZP_07475209.1| Hypothetical protein BIBO2_2337 [Brucella sp. BO2]
gi|306287414|gb|EFM58894.1| Hypothetical protein BIBO2_2337 [Brucella sp. BO2]
Length = 197
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 24 IQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFILSDYSK 78
++ LK P A + + F SW S + + + ++MK L+ Y+K
Sbjct: 3 VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPHLNGYTK 59
Query: 79 DRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYI 138
D YS+ A +A + G I L+ +P E G + A S ++ AN L +
Sbjct: 60 DNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNANGRLQL 116
Query: 139 SQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFA 198
+ F + + LR +A +++K+ I + PV I + + A+ +++++ + +F
Sbjct: 117 DKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGKVLIFE 176
Query: 199 GQVSVVVNPGVL 210
V + V+ L
Sbjct: 177 NNVHMTVDGNTL 188
>gi|17988075|ref|NP_540709.1| hypothetical protein BMEI1792 [Brucella melitensis bv. 1 str. 16M]
gi|17983825|gb|AAL52973.1| hypothetical protein BMEI1792 [Brucella melitensis bv. 1 str. 16M]
Length = 217
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 18 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 73
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 74 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 130
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 131 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 190
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 191 KVLIFEYNVHMTVDGNTL 208
>gi|326408177|gb|ADZ65242.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 250
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 51 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 106
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 107 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 163
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 164 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 223
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 224 KVLIFEYNVHMTVDGNTL 241
>gi|49474846|ref|YP_032887.1| hypothetical protein BH00150 [Bartonella henselae str. Houston-1]
gi|49237651|emb|CAF26831.1| hypothetical protein BH00150 [Bartonella henselae str. Houston-1]
Length = 216
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL---DFEPMIMKKFI 72
K +H R I LKF P +T L+ W F + D + D E +MK +
Sbjct: 24 KASRHSRSISILKFLLPLCALTTA---LVFCWFTF-FFVPVAFDPVISKDEESEMMKLTM 79
Query: 73 LS----DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDF--ELTVPTQRSEYGDMYLFAHS 126
L+ Y++ Y L AE+A ++ G+I LQ+ E + QR ++L A
Sbjct: 80 LNPKLEGYTRSHEPYWLKAEKAFQD-HTRSGVIGLQNITAEAFLGKQRR----VFLDAQG 134
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA 186
++ N L + +PF++ D + F A +++ +N+ V I + L+AN
Sbjct: 135 GNYDNMNGCLQLDKPFRITTNDGMIAQFMAADINLSEGQLNTDKRVNIRRAGLHLAANAL 194
Query: 187 RIENSSRSAVFAGQVSVV 204
+I + F G V +V
Sbjct: 195 QIREKGQEMYFHGGVHLV 212
>gi|254713273|ref|ZP_05175084.1| hypothetical protein BcetM6_07962 [Brucella ceti M644/93/1]
gi|254716374|ref|ZP_05178185.1| hypothetical protein BcetM_08050 [Brucella ceti M13/05/1]
gi|261218156|ref|ZP_05932437.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261320996|ref|ZP_05960193.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260923245|gb|EEX89813.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293686|gb|EEX97182.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 240
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + +MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKFVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFENNVHMTVDGNTL 231
>gi|225851688|ref|YP_002731921.1| hypothetical protein BMEA_A0161 [Brucella melitensis ATCC 23457]
gi|256045947|ref|ZP_05448819.1| hypothetical protein Bmelb1R_15659 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256264799|ref|ZP_05467331.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563228|ref|ZP_05833714.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265992357|ref|ZP_06104914.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|225640053|gb|ACN99966.1| protein of unknown function DUF1239 [Brucella melitensis ATCC
23457]
gi|260153244|gb|EEW88336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263003423|gb|EEZ15716.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263095210|gb|EEZ18879.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 240
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 41 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 214 KVLIFEYNVHMTVDGNTL 231
>gi|326537890|gb|ADZ86105.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 252
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 53 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 108
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 109 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 165
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + + LR +A +++K+ I + PV I + + A+ +++++
Sbjct: 166 NGRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNG 225
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F V + V+ L
Sbjct: 226 KVLIFEYNVHMTVDGNTL 243
>gi|218507226|ref|ZP_03505104.1| hypothetical protein RetlB5_06225 [Rhizobium etli Brasil 5]
Length = 88
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A I
Sbjct: 2 YNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLEI 61
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKK 213
+ R F G V + V+P + K+
Sbjct: 62 TDKGRVITFEGNVRMNVDPSTIHKQ 86
>gi|319404927|emb|CBI78527.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 216
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L Y+ Y + AE+A S GII L++ VPT+ G +++ A ++
Sbjct: 82 LEGYTNFHKPYKIKAEKAFQDRKSS-GIIGLKNITAEVPTEGR--GQIFIDAQGGIYDNI 138
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
L + +PF + +D + F TA +D+ N+ PV I + F L AN +I
Sbjct: 139 KSHLKLDEPFTVTTQDGIIAKFTTAKIDLSKSQFNTDQPVNIQSAGFHLMANALQIYGKE 198
Query: 193 RSAVFAGQVSVVVN 206
+ F V +V++
Sbjct: 199 QVMYFQKGVRIVLD 212
>gi|222147330|ref|YP_002548287.1| hypothetical protein Avi_0408 [Agrobacterium vitis S4]
gi|221734320|gb|ACM35283.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 221
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 15 SKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMK 69
+ YR+ H ++ L+ P V + F+ S +R I+ E ++M
Sbjct: 19 TSYRKAVGHSHRVRRLRIALPALAVVLSLGFVAVSVVRAYLPDNIKIEGAKIEDGKVVMA 78
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
K +S + + YS+ A RA + +I L+ T+P D+ A +
Sbjct: 79 KPAISGRNSNGAPYSMNAVRALQDIKN-PNLITLETITATMPVNDDTSADIK--AQRGTY 135
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ + + + +PF + + + +F++A LDVK + ++ PV I + + A +
Sbjct: 136 DRSTDKMVLDRPFTIHLSSGVDAEFQSADLDVKAGKLKTNQPVSIKTKESSIVAQSMDMT 195
Query: 190 NSSRSAVFAGQVSVVVNPGVLQKKEN 215
+ ++ G V + + P LQK N
Sbjct: 196 DKGQTITLTGAVRLNIAPTALQKPGN 221
>gi|319898206|ref|YP_004158299.1| hypothetical protein BARCL_0015 [Bartonella clarridgeiae 73]
gi|319402170|emb|CBI75696.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 216
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L Y+ Y + AE+A S GII L++ +PT + G +++ A ++
Sbjct: 82 LEGYTNFYKPYWIKAEKAFQDRKSS-GIIGLKNITAELPTGKQ--GQLFINAEEGAYDNI 138
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + +PF + KD + F TA +++ +N+ PV I + F L AN ++
Sbjct: 139 NSRLQLDKPFTVTTKDGIIAQFMTANINLSTNQLNTDQPVNIQSTGFHLMANALQVCEKE 198
Query: 193 RSAVFAGQVSVVVN 206
+ F V ++++
Sbjct: 199 QVMYFQRGVHIILD 212
>gi|153007512|ref|YP_001368727.1| hypothetical protein Oant_0167 [Ochrobactrum anthropi ATCC 49188]
gi|151559400|gb|ABS12898.1| protein of unknown function DUF1239 [Ochrobactrum anthropi ATCC
49188]
Length = 237
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
++H ++ LK P A + IVG SW + + + + ++M
Sbjct: 40 QRHSIRVRVLKTALPVAAI-IVGAVF--SWYTFLATPNAPVKVEVNNGGESGKLVMTSPH 96
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A T G I L+ +P + G + A S ++ A
Sbjct: 97 LNGYTKDNRPYSMTASKA-TQDAKNSGAISLEGISAELPV--GDKGTAKVEATSGVYDNA 153
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
N L + + F + D LR +A +++K+ I + PV I + A+ +++++
Sbjct: 154 NGRLQLDKDFTVTTDDGLRAVLRSADVNLKSGQITTDKPVDIRSGSTHILADSMQVKDNG 213
Query: 193 RSAVFAGQVSVVVNPGVL 210
+ +F +V + V+ V+
Sbjct: 214 KVLIFENKVRMTVDGSVV 231
>gi|319406417|emb|CBI80057.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 216
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL------DFEPMIMKKFIL 73
H ++ LK PF + I L+ W + S S +L + + M L
Sbjct: 26 HSHKVRLLKICLPFLALIIA---LIFCWFTFFSISFSFDKVLLSHEEEEIAQLTMLNPRL 82
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
Y+ Y + AE+A S GII L++ VPT+ G +++ A ++
Sbjct: 83 ESYTNFHKPYWIKAEKAFQDRKSS-GIIGLKNITAEVPTKGQ--GQIFIDAQGGVYDNIK 139
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L +++PF + KD + F A +D+ N+ PV I ++F L AN ++ +
Sbjct: 140 SHLQLNEPFTVTTKDGIIAKFIAANIDLSKSQFNTDQPVNIQSANFHLIANALQVCEKEQ 199
Query: 194 SAVFAGQVSVVVN 206
F V +V++
Sbjct: 200 VMYFQRGVRIVLD 212
>gi|239831004|ref|ZP_04679333.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823271|gb|EEQ94839.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
++M L+ Y+KD YS+ A +A T G I L+ +P E G + A
Sbjct: 90 LVMTSPHLNGYTKDNRPYSMTAAKA-TQDAKNSGAISLEGISAELPV--GEKGMAKVEAT 146
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
S ++ AN L + + F + D LR +A +++K+ I + PV I + A+
Sbjct: 147 SGVYDNANGRLQLDKDFTVTTDDGLRAVMHSADVNLKSGQITTDKPVDIRSGSTHILADS 206
Query: 186 ARIENSSRSAVFAGQVSVVVNPGVL 210
+++++ + +F +V + V+ V+
Sbjct: 207 MQVKDNGKVLIFENKVRMTVDGSVV 231
>gi|319403503|emb|CBI77082.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 154
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L Y+ Y + AE+A S GII L++ VPT+ G +++ A ++
Sbjct: 20 LEGYTNFHKPYWIKAEKAFQDRKSS-GIIGLKNITAEVPTKGQ--GQIFIDAQGGVYDNI 76
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
L ++PF + KD + F A +D+ N+ PV I ++F L AN ++
Sbjct: 77 KSHLQFNEPFTVTTKDGIIAKFIAANIDLSKSQFNTDQPVNIQSANFHLIANALQVCEKE 136
Query: 193 RSAVFAGQVSVVVN 206
+ F V +V++
Sbjct: 137 QVMYFQKGVRIVLD 150
>gi|114706453|ref|ZP_01439355.1| hypothetical protein FP2506_01675 [Fulvimarina pelagi HTCC2506]
gi|114538314|gb|EAU41436.1| hypothetical protein FP2506_01675 [Fulvimarina pelagi HTCC2506]
Length = 224
Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
++M LS + + LVA++A + G I L+ + V S+ ++ A
Sbjct: 59 VVMDDPRLSGVDSNDRPFELVAQKAMQAITGGA--IDLEGIDAKVAV--SDETKAFIRAS 114
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
S ++ L ++ ++ D L+++ ++A +D+ T+ + +PV I +D + AN
Sbjct: 115 SGHYDPNAQMLKLAGGMSVETDDGLQVEMKSAGIDLGQGTLTTEEPVHIRTADQEIRANG 174
Query: 186 ARIENSSRSAVFAGQVSVVVNP 207
+ + F+G VS+ +NP
Sbjct: 175 MSLSENGDRIRFSGGVSMKLNP 196
>gi|254500212|ref|ZP_05112363.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436283|gb|EEE42962.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 203
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 12 LQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR-------ISTFSKSSIDLLDFE 64
+QRS R+H ++ L+F FP +G +L+ I + +F +++ +L +
Sbjct: 5 VQRSA-RRHSTLVRVLRFLFPA-----IGLLILAGMIGAVVLFNVLGSFGAANL-VLTSD 57
Query: 65 PMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFA 124
++M LS +R Y + A +A + II L++ + E + +
Sbjct: 58 GIVMDHPKLSGNDGER-SYQVTARKAIQRLTDPR-IIDLEEIRADIVLAPDE--GARIIS 113
Query: 125 HSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSAN 184
+N A TL + + ++ + +D ET +D+K I+S DP+ I + L+A
Sbjct: 114 LKGIYNNAAETLRLYEGVQLNWSEGYTVDVETVDVDLKTGAISSDDPITIGSGEAQLTAG 173
>gi|261884101|ref|ZP_06008140.1| hypothetical protein CfetvA_02306 [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 166
Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL-----LDFEPMIMKKFI 72
R VR ++ LK P A + + F SW S + + + ++MK
Sbjct: 19 RHSVR-VRVLKTALPVAAIALAAVF---SWYTFLATPASPVKVEVNTGGETGKLVMKSPH 74
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ A
Sbjct: 75 LNGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNA 131
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITI 166
N L + + F + + LR + +++K+ I
Sbjct: 132 NGRLQLDKDFTVTTDNGLRAQLHSEDVNLKSGQI 165
>gi|328545552|ref|YP_004305661.1| hypothetical protein SL003B_3936 [polymorphum gilvum SL003B-26A1]
gi|326415293|gb|ADZ72356.1| hypothetical protein SL003B_3936 [Polymorphum gilvum SL003B-26A1]
Length = 223
Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 17/197 (8%)
Query: 23 FIQFLKFFFPFATVTIV----GWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSK 78
++ L+ FP V I+ G L + +++ ++ +L E ++M + LS +
Sbjct: 35 LVRLLRILFPLLGVAILVAIAGLIFL--YNVLNSLGIGNV-ILTSEGLVMDRPELSGHDG 91
Query: 79 DRVKYSLVAERAKTSFNSGKGIIFLQDFELTV---PTQRSEYGDMYLFAHSARFNLANHT 135
+R Y + A RA + II L+ + P QR+ + A +N T
Sbjct: 92 ER-SYKVSAVRAIQRITDPR-IIDLETITAEIVLGPDQRA-----AITATKGTYNNGAET 144
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
L +S+ ++ ++ FE+ +D++ T+ +SDP+ I + A +
Sbjct: 145 LSLSEGIELDWSGTYQVHFESVDVDLRTGTVRTSDPLQINSQQGDIQAGRFAYDQDKGLV 204
Query: 196 VFAGQVSVVVNPGVLQK 212
F + +V+ PG +K
Sbjct: 205 RFTDGIKMVLRPGAQEK 221
>gi|220925752|ref|YP_002501054.1| hypothetical protein Mnod_5923 [Methylobacterium nodulans ORS 2060]
gi|219950359|gb|ACL60751.1| protein of unknown function DUF1239 [Methylobacterium nodulans ORS
2060]
Length = 240
Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKFILSD 75
H ++FL+ P + V +W+ ++ L + + M+ L+
Sbjct: 28 HSAQVRFLRLAIPLGSAAAVLAVAAVTWLDPFGALGVTVSLGEVSVSGSKVTMESPRLTG 87
Query: 76 Y-SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM-YLFAHSARFNLAN 133
Y KD Y + A+ A +I LQ+ + + Q E G + +L A S F+
Sbjct: 88 YRGKDGRPYEVTAKAALQDVRR-PTVIELQNMKGHM--QADETGALSHLEALSGVFDTQK 144
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+L +S+ ++ +A ++ K T+NS +PV +T + + ++ + ++ R
Sbjct: 145 ESLELSRSIRLWTDKGQEARLSSAQVNFKAGTMNSREPVTVTLPNGTIRSDGLEVVDNGR 204
Query: 194 SAVFAGQVSVVVNPGV 209
+ F G V V + GV
Sbjct: 205 TISFIGNVKTVFDGGV 220
>gi|299133325|ref|ZP_07026520.1| protein of unknown function DUF1239 [Afipia sp. 1NLS2]
gi|298593462|gb|EFI53662.1| protein of unknown function DUF1239 [Afipia sp. 1NLS2]
Length = 233
Score = 38.5 bits (88), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 8/194 (4%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKS-SIDL----LDFEPMIMKKFIL 73
+H R +++L+ P + + + +S F K IDL + + M L
Sbjct: 20 RHSRRVRWLRRAVPAVVILSLALIIGASVFNPFRFLKKLPIDLSKLSVSGTKITMDAPHL 79
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y DR Y + A+ A + L ++ Q + + + A + F+
Sbjct: 80 AGYLPDRRPYEVWAKAATQDVTDPTKVDML---DIRAQVQMQDKSTLRVDAQNGHFDTKT 136
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L ++ ++ + A +D+ I+S PV + ++ L++ RI +
Sbjct: 137 QLLDLTNQILLQTTTGYQAQLTQARVDLATGIISSDQPVAVKLTNGTLNSQNLRITDHGA 196
Query: 194 SAVFAGQVSVVVNP 207
SAVF G V+++++P
Sbjct: 197 SAVFGGGVTMLLDP 210
>gi|298290362|ref|YP_003692301.1| hypothetical protein Snov_0349 [Starkeya novella DSM 506]
gi|296926873|gb|ADH87682.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 325
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 7 RNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL------ 60
R+K + + +H R ++F ++ P T +G L ++ + FS ++DL
Sbjct: 33 RSKTVARFKAAARHSRRVRFFRWALPVGVTTALGLTLAVNY--LDPFS-IAVDLPFELGR 89
Query: 61 --LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFE-LTVPTQRSEY 117
L + M+ L ++ D YS+ AE A I D E + + +++
Sbjct: 90 ISLSGSKVKMEFPKLHGFTSDNRGYSVTAEAAYQDLTKPDAI----DLETIAAKLELADH 145
Query: 118 GDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHS 177
G + L A + ++ L + + + A +D+K + S PV T+
Sbjct: 146 GWVNLVAATGHYDTKTEKLMLDGGIRFDTSSGYGGHLQNASVDIKGGKLVSKKPVEFTYL 205
Query: 178 DFVLSANFARIENSSRSAVFAGQV 201
D L+A+ + A+ G V
Sbjct: 206 DGKLTADSIEVTQKDSRALLVGNV 229
>gi|209883610|ref|YP_002287467.1| hypothetical protein OCAR_4456 [Oligotropha carboxidovorans OM5]
gi|209871806|gb|ACI91602.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 230
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 8/197 (4%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTF-SKSSIDL----LDFEPMIMKK 70
+ +H R +++L+ P V + + +S F +K IDL + + M
Sbjct: 17 RAARHSRRVRWLRRAVPAIVVVALALIIGASVFNPFRFLNKLPIDLSKLSVSGTKITMDA 76
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
L+ + D+ Y + A+ A + L + Q + + L A + FN
Sbjct: 77 PHLAGFLPDQRPYEVWAKAATQDVTDPTKVDML---NIRAQVQLEDKSTVRLDAQNGHFN 133
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
L ++ ++ A +D+ + I+S PV + ++ L++ RI
Sbjct: 134 TKTQLLDLTNDILLQTTSGYEARLSQARVDMGSGVISSDQPVAVKLTNGTLNSQNLRITE 193
Query: 191 SSRSAVFAGQVSVVVNP 207
SAVF G V++++ P
Sbjct: 194 HGASAVFGGGVTMMLEP 210
Searching..................................................done
Results from round 2
>gi|254780746|ref|YP_003065159.1| hypothetical protein CLIBASIA_03165 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040423|gb|ACT57219.1| hypothetical protein CLIBASIA_03165 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 215
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL 60
MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL
Sbjct: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL 60
Query: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM
Sbjct: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV
Sbjct: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
Query: 181 LSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
LSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN
Sbjct: 181 LSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
>gi|86356058|ref|YP_467950.1| hypothetical protein RHE_CH00401 [Rhizobium etli CFN 42]
gi|86280160|gb|ABC89223.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 221
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 8/206 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
RS Y H ++ LK P A + + G + + + + E ++M
Sbjct: 18 RSPYGDALFHSARVRRLKILLPLAALIVAGALATVALVSLYLPENVKFEGAKIENGKVVM 77
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K ++ + D V YS++AERA + +I L+ + VP + A +A
Sbjct: 78 EKPAIAGRNSDGVNYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVIASTAD 134
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A I
Sbjct: 135 YNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLEI 194
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ R F G V + V+P + K+
Sbjct: 195 TDKGRVITFEGNVRMNVDPSTIHKQG 220
>gi|190890073|ref|YP_001976615.1| hypothetical protein RHECIAT_CH0000443 [Rhizobium etli CIAT 652]
gi|190695352|gb|ACE89437.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327193443|gb|EGE60341.1| hypothetical protein RHECNPAF_159006 [Rhizobium etli CNPAF512]
Length = 221
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 8/206 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
RS Y H ++ LK P A + + + + I + E ++M
Sbjct: 18 RSAYGDALFHSARVRRLKILLPVAALIVAAGLTAVALVSIYLPENVKFEGAKIENGKVVM 77
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K ++ + D + YS++AERA + +I L+ + VP + A +A
Sbjct: 78 EKPAIAGRNSDGINYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVVASTAD 134
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A I
Sbjct: 135 YNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLEI 194
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ R F G V + V+P + K+
Sbjct: 195 TDKGRVITFEGNVRMNVDPSTIHKQG 220
>gi|218458734|ref|ZP_03498825.1| hypothetical protein RetlK5_04413 [Rhizobium etli Kim 5]
Length = 231
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 8/206 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
RS Y H ++ LK P A + + + + I + E ++M
Sbjct: 28 RSAYGDALFHSARVRRLKILLPVAALIVAAGLTAVALVSIYLPENVKFEGAKIENGKVVM 87
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K ++ + D + YS++AERA + I L+ + VP + A +A
Sbjct: 88 EKPAIAGRNSDGINYSMLAERALQDIRN-PDFITLETIKAAVPMNDGLIA--RVVASTAD 144
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A I
Sbjct: 145 YNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLEI 204
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ R F G V + V+P + K+
Sbjct: 205 TDKGRVITFEGNVRMNVDPSTIHKQG 230
>gi|116250188|ref|YP_766026.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254836|emb|CAK05910.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 221
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
R+ Y H ++ LK P A + I + + I ++ E ++M
Sbjct: 18 RNAYGDALFHSARVRRLKILLPVAALIIAASLTAVALVSIYLPENVKMEGAKIENGKVVM 77
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K +S + D + YS++AERA + +I L+ + VP + A +A
Sbjct: 78 EKPAISGRNSDGINYSMLAERALQDIRN-PNLITLETIKAAVPMNDGLIA--RVVASTAD 134
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N L+++ PF + + L +F++A LD+K + S DPV IT + + A +I
Sbjct: 135 YNRTTDNLHMTAPFTLVLSSGLNANFQSAELDIKGGNMRSDDPVTITKDNASIVAKTLQI 194
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ R F G V + V+P + K+
Sbjct: 195 TDKGRVITFEGNVRMNVDPSTIHKQG 220
>gi|241202815|ref|YP_002973911.1| hypothetical protein Rleg_0061 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856705|gb|ACS54372.1| protein of unknown function DUF1239 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 221
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 5/197 (2%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDYS 77
H ++ LK P A + + + + I ++ E ++M+K +S +
Sbjct: 27 HSARVRRLKILLPVAALIVAASLTAVALVSIYLPENIKMEGAKIENGKVVMEKPAISGRN 86
Query: 78 KDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLY 137
D + YS++AERA + +I L+ + VP + A +A +N A L+
Sbjct: 87 SDGINYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVVASTADYNRATDNLH 143
Query: 138 ISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
++ PF + + L +F++A LD+K + S DPV IT + + A +I + R F
Sbjct: 144 MTAPFTLVLSSGLNANFQSAQLDIKGGNMRSDDPVTITKDNASIVAKTLQITDKGRVITF 203
Query: 198 AGQVSVVVNPGVLQKKE 214
G V + V+P + K+
Sbjct: 204 EGNVRMNVDPSTIHKQG 220
>gi|227820607|ref|YP_002824577.1| hypothetical protein, putative transmembrane protein [Sinorhizobium
fredii NGR234]
gi|227339606|gb|ACP23824.1| hypothetical protein, putative transmembrane protein [Sinorhizobium
fredii NGR234]
Length = 239
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFI 72
+ +H ++ LK PFA I F S++R ++ E ++M+
Sbjct: 40 ASAARHSARVKRLKIVLPFAAGVIALVFAAISFVRAFLPEDLQLETATIENGKIVMQNPA 99
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
+S ++ + YS+ A+RA + II L+ +P + + A S ++
Sbjct: 100 ISGRNRQDISYSMKAQRALQDI-ANPDIITLEQIHAEMPVNDTLVAT--VDATSGIYDRG 156
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
+TL ++ PF + + + + DF++A LD+ + + P+ I+ + + A R+ +
Sbjct: 157 ANTLDMNAPFTISMNNGVNADFQSAYLDIDAGEMETKHPIAISMNGGSIIAQSLRMTDKG 216
Query: 193 RSAVFAGQVSVVVNPGVLQK 212
R F G V V V P ++K
Sbjct: 217 RIVTFEGMVRVNVEPSAIRK 236
>gi|150395246|ref|YP_001325713.1| hypothetical protein Smed_0018 [Sinorhizobium medicae WSM419]
gi|150026761|gb|ABR58878.1| protein of unknown function DUF1239 [Sinorhizobium medicae WSM419]
Length = 222
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDY 76
+H ++ LK P I F S++R + ++ E ++M+ +S
Sbjct: 27 RHSARVKRLKVILPLIAGLIALVFAAVSFVRAFLPEELQLETATIENGKIVMQNPAISGR 86
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+K + YS+ A+RA + II L+ +P + + A S ++ +TL
Sbjct: 87 NKQDISYSMKAQRALQDI-ANPNIITLETIHAEMPVNDTLIAT--VDAQSGVYDRGANTL 143
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
++ PF + + + + DF++A LD+ + + P+ I+ + + A R+ + R
Sbjct: 144 DMNAPFTISMNNGVIADFQSAYLDINAGEMETKHPIAISMTGGSIIAQKLRMTDKGRVVT 203
Query: 197 FAGQVSVVVNPGVLQK 212
F G V V + P ++K
Sbjct: 204 FEGMVRVNIEPSAIRK 219
>gi|15964137|ref|NP_384490.1| hypothetical protein SMc01136 [Sinorhizobium meliloti 1021]
gi|307301282|ref|ZP_07581044.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307317953|ref|ZP_07597390.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073313|emb|CAC41821.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896355|gb|EFN27104.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306903738|gb|EFN34325.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 222
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILSDY 76
+H ++ LK P + F+ S++R + ++ E ++M+ +S
Sbjct: 27 RHSARVRRLKVMLPLIAGAVALIFVTVSFVRAFLPEELQLETATIENGKIVMQNPAISGR 86
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+K + YS+ A+RA + +I L+ +P + + A S ++ +TL
Sbjct: 87 NKQDISYSMKAQRALQDI-ANPNLITLETIHAEMPVNDTLIAT--VDATSGIYDRGANTL 143
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
++ PF + + + + DF++A LD+ + + P+ I+ + A R+ + R
Sbjct: 144 DMNAPFTISMNNGVNADFQSAYLDINAGEMETKHPIAISMKGGSIIAQKLRMTDKGRVVT 203
Query: 197 FAGQVSVVVNPGVLQK 212
F G V V + P ++K
Sbjct: 204 FEGMVRVNIEPSAIRK 219
>gi|260460502|ref|ZP_05808753.1| protein of unknown function DUF1239 [Mesorhizobium opportunistum
WSM2075]
gi|259033607|gb|EEW34867.1| protein of unknown function DUF1239 [Mesorhizobium opportunistum
WSM2075]
Length = 237
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL--DFEPMIMKKFIL 73
+ ++H R ++ LKF P A I F + S++ + ++M L
Sbjct: 30 RAQRHSRRVRVLKFAVPLAAALIAVAFPVYSYLAAPVSVAVQAEGTAFSNGKLVMANPKL 89
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++K + YS+ A RA ++ +GII L+ + VP + A ++
Sbjct: 90 NGFTKLKQPYSMTALRAIQDVST-QGIIELEGIDAKVPIAPDNVA--AVKASHGTYDRDG 146
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+T+ ++ + D L+ F++ LD+ T+ + DPV ++ ++A+ ++++ +
Sbjct: 147 NTMKLNSDVTITTTDGLQAKFKSVFLDMGKGTMKTDDPVDVSRGGSQITADSMSVQDNGK 206
Query: 194 SAVFAGQVSVVVNPGVLQKKE 214
VF +V V ++P L+ E
Sbjct: 207 VLVFENKVRVNIDPAALKAAE 227
>gi|13472791|ref|NP_104358.1| hypothetical protein mll3200 [Mesorhizobium loti MAFF303099]
gi|14023538|dbj|BAB50144.1| mll3200 [Mesorhizobium loti MAFF303099]
Length = 237
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL--DFEPMIMKKFIL 73
+ ++H R ++ LKF P A I F + S++ + ++M L
Sbjct: 30 RAQRHSRRVRVLKFAVPLAAGLIAVAFPVYSYLAAPVSVAVQSEGAAFSNGKLVMANPKL 89
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++K + YS+ A RA N+ +GII L+ + VP + A ++
Sbjct: 90 NGFTKQKQPYSMTALRAIQDVNT-QGIIELEGIDAKVPVGPDNVA--AIKASHGIYDRDG 146
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+T+ ++ + D ++ F++ LD+ T+ + DPV ++ ++A+ ++++ +
Sbjct: 147 NTMKMTSDVMITTTDGMQAKFKSVFLDMGKGTMKTDDPVDVSSGGSQITADSLSVQDNGK 206
Query: 194 SAVFAGQVSVVVNPGVLQKKE 214
VF +V V ++P ++ E
Sbjct: 207 ILVFEKRVRVNIDPASVKAAE 227
>gi|222084666|ref|YP_002543195.1| hypothetical protein Arad_0623 [Agrobacterium radiobacter K84]
gi|221722114|gb|ACM25270.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 228
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 12 LQRSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PM 66
L+R+ Y+ H ++ LK F P A + + F+ S +R I+ E +
Sbjct: 16 LERNAYKDAIFHSTRVRKLKLFLPLAALIVSLIFIAVSLVRAYLPENIQIEGARIEDGKV 75
Query: 67 IMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHS 126
+M++ ++ +KD + YS++AE+A + +I L+ + ++P + A S
Sbjct: 76 VMERPAIAGRNKDGINYSMLAEKALQDIKN-PNMITLKSIKASMPVNSDVIAH--VTAES 132
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA 186
A F+ TL ++ PF + + + LR +F TA LDVK ++S D V I + A
Sbjct: 133 ADFDRQADTLKLTDPFTILMDNGLRAEFRTAFLDVKKGDLSSQDQVAIYRGGMSVVAQSL 192
Query: 187 RIENSSRSAVFAGQVSVVVNPGVLQKK 213
++ + F GQV + ++P L K
Sbjct: 193 KMTDKGSVIEFDGQVRMNIDPTTLHNK 219
>gi|163867320|ref|YP_001608514.1| hypothetical protein Btr_0015 [Bartonella tribocorum CIP 105476]
gi|161016961|emb|CAK00519.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 215
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMK----K 70
K QH R I LK F P + + F ++ + + + I L + E +M
Sbjct: 21 KKASQHSRRISLLKIFLPLSALVSALIFCWFTFFSVPHVTSNPIPLNNEESEVMNLTILN 80
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
L Y++ Y L AE+A ++ GII LQ+ + ++L A ++
Sbjct: 81 PKLEGYTRAHEPYWLKAEKAFQD-HTRSGIIGLQNITAK--ASMGQQRQIFLAAQGGVYD 137
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
N L + +PF + D + F +A +++ + + V I + F L+AN +I
Sbjct: 138 NINGFLQLDKPFTITTNDGMMAQFMSADINLSEGQLKTDQYVNIQRAGFHLAANALQIRE 197
Query: 191 SSRSAVFAGQVSVVV 205
++ F G V +V+
Sbjct: 198 KGKNMYFHGGVHLVL 212
>gi|222147330|ref|YP_002548287.1| hypothetical protein Avi_0408 [Agrobacterium vitis S4]
gi|221734320|gb|ACM35283.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 221
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFIL 73
K H ++ L+ P V + F+ S +R I+ E ++M K +
Sbjct: 23 KAVGHSHRVRRLRIALPALAVVLSLGFVAVSVVRAYLPDNIKIEGAKIEDGKVVMAKPAI 82
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
S + + YS+ A RA + +I L+ T+P D+ A ++ +
Sbjct: 83 SGRNSNGAPYSMNAVRALQDIKN-PNLITLETITATMPVNDDTSADIK--AQRGTYDRST 139
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+ + +PF + + + +F++A LDVK + ++ PV I + + A + + +
Sbjct: 140 DKMVLDRPFTIHLSSGVDAEFQSADLDVKAGKLKTNQPVSIKTKESSIVAQSMDMTDKGQ 199
Query: 194 SAVFAGQVSVVVNPGVLQKKEN 215
+ G V + + P LQK N
Sbjct: 200 TITLTGAVRLNIAPTALQKPGN 221
>gi|319781469|ref|YP_004140945.1| hypothetical protein Mesci_1740 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167357|gb|ADV10895.1| protein of unknown function DUF1239 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 237
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL--DFEPMIMKKFIL 73
+ ++H R ++ LKF P A I F + S++ K + ++M L
Sbjct: 30 RAQRHSRRVRVLKFAVPVAAALIAVAFPVYSYLAAPVSVKIQAEGTAFSNGKLVMANPKL 89
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++K + YS+ A RA ++ +GII L+ + VP + A ++
Sbjct: 90 NGFTKQKQPYSMTALRAIQDVST-QGIIELEGIDAKVPIASDNVA--AVKASHGTYDRDG 146
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+T+ ++ + D ++ F++ LD+ T+ + DPV ++ ++A+ ++++ +
Sbjct: 147 NTMNLTSDVTITTTDGMQAKFKSVFLDMGKGTMKTGDPVDVSRGGSRITADTMSVQDNGK 206
Query: 194 SAVFAGQVSVVVNPGVLQKKEN 215
VF +V V ++ L+ +
Sbjct: 207 ILVFENKVRVNIDSAALKAAQG 228
>gi|209547657|ref|YP_002279574.1| hypothetical protein Rleg2_0045 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533413|gb|ACI53348.1| protein of unknown function DUF1239 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 221
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIM 68
RS Y H ++ LK P A + I L + + I + E ++M
Sbjct: 18 RSAYGDALFHSARVRRLKILLPVAALIIAAALLAVALVSIYLPENVKFEGAKIENGKVVM 77
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+K ++ + D + YS++AERA + +I L+ + VP + A +A
Sbjct: 78 EKPAIAGRNSDGINYSMLAERALQDIRN-PDLITLETIKAAVPMNDGLIA--RVVASTAD 134
Query: 129 FNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI 188
+N A L+++ PF + + L +F++A LD+K + S DPV IT + + A +I
Sbjct: 135 YNRATDNLHMTAPFTLVLSSGLNANFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLQI 194
Query: 189 ENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ R F G V + V+P + K+
Sbjct: 195 TDKGRVITFEGNVRMNVDPSTIHKQG 220
>gi|254718371|ref|ZP_05180182.1| hypothetical protein Bru83_02283 [Brucella sp. 83/13]
gi|265983332|ref|ZP_06096067.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839602|ref|ZP_07472406.1| protein of unknown function DUF1239 [Brucella sp. NF 2653]
gi|264661924|gb|EEZ32185.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405300|gb|EFM61575.1| protein of unknown function DUF1239 [Brucella sp. NF 2653]
Length = 240
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|256112660|ref|ZP_05453581.1| hypothetical protein Bmelb3E_08255 [Brucella melitensis bv. 3 str.
Ether]
gi|265994100|ref|ZP_06106657.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765081|gb|EEZ11002.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 240
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|315121909|ref|YP_004062398.1| hypothetical protein CKC_00795 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495311|gb|ADR51910.1| hypothetical protein CKC_00795 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 215
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 139/214 (64%), Gaps = 4/214 (1%)
Query: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL 60
M+ LDRR K+LLQR KY QH + I+FLKFF P +V ++ W SSW+RI FSK + D
Sbjct: 4 MNELDRREKLLLQRKKYNQHFKLIRFLKFFLPTLSVVLLSWLFFSSWVRIKHFSKPAADF 63
Query: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
L+FE M++ KFILSDYS+D+ +YSL A+RA K I LQD EL +P Y +M
Sbjct: 64 LNFEFMVINKFILSDYSRDKKRYSLSAKRA-QDNEGSKNTILLQDLELVMPI--PGYDEM 120
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDN-LRLDFETAVLDVKNITINSSDPVIITHSDF 179
L A+ A F+L + L I PFK+ +N +L F+TAV+D+K I +NSSD V T S F
Sbjct: 121 RLLANYASFDLYRNMLNIQHPFKIIFNNNDTQLYFKTAVMDIKKIVLNSSDAVKFTSSTF 180
Query: 180 VLSANFARIENSSRSAVFAGQVSVVVNPGVLQKK 213
LSA IEN + A+F+G VSVV++P +L KK
Sbjct: 181 TLSAQSCSIENDQKRAIFSGDVSVVIHPKILHKK 214
>gi|306844423|ref|ZP_07477013.1| protein of unknown function DUF1239 [Brucella sp. BO1]
gi|306275236|gb|EFM56986.1| protein of unknown function DUF1239 [Brucella sp. BO1]
Length = 240
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|189023407|ref|YP_001934175.1| hypothetical protein BAbS19_I01470 [Brucella abortus S19]
gi|254690459|ref|ZP_05153713.1| hypothetical protein Babob68_09884 [Brucella abortus bv. 6 str.
870]
gi|254694948|ref|ZP_05156776.1| hypothetical protein Babob3T_09882 [Brucella abortus bv. 3 str.
Tulya]
gi|254696579|ref|ZP_05158407.1| hypothetical protein Babob28_02380 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700964|ref|ZP_05162792.1| hypothetical protein Bsuib55_08914 [Brucella suis bv. 5 str. 513]
gi|254705334|ref|ZP_05167162.1| hypothetical protein Bsuib36_15718 [Brucella suis bv. 3 str. 686]
gi|254731492|ref|ZP_05190070.1| hypothetical protein Babob42_09909 [Brucella abortus bv. 4 str.
292]
gi|256060297|ref|ZP_05450470.1| hypothetical protein Bneo5_08035 [Brucella neotomae 5K33]
gi|256258715|ref|ZP_05464251.1| hypothetical protein Babob9C_15481 [Brucella abortus bv. 9 str.
C68]
gi|260546429|ref|ZP_05822169.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260756011|ref|ZP_05868359.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759235|ref|ZP_05871583.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260760957|ref|ZP_05873300.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260885031|ref|ZP_05896645.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215287|ref|ZP_05929568.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261324269|ref|ZP_05963466.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751482|ref|ZP_05995191.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261756045|ref|ZP_05999754.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|189018979|gb|ACD71701.1| hypothetical protein BAbS19_I01470 [Brucella abortus S19]
gi|260096536|gb|EEW80412.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669553|gb|EEX56493.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671389|gb|EEX58210.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676119|gb|EEX62940.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260874559|gb|EEX81628.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260916894|gb|EEX83755.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261300249|gb|EEY03746.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261741235|gb|EEY29161.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745798|gb|EEY33724.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 240
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|163842425|ref|YP_001626829.1| hypothetical protein BSUIS_A0156 [Brucella suis ATCC 23445]
gi|163673148|gb|ABY37259.1| protein of unknown function DUF1239 [Brucella suis ATCC 23445]
Length = 240
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|148559427|ref|YP_001258188.1| hypothetical protein BOV_0150 [Brucella ovis ATCC 25840]
gi|148370684|gb|ABQ60663.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 255
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 53 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 112
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 113 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 169
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 170 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 229
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 230 VLIFENNVHMTVDGNTLSA 248
>gi|237814625|ref|ZP_04593623.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237789462|gb|EEP63672.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 255
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 53 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 112
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 113 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 169
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 170 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 229
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 230 VLIFENNVHMTVDGNTLSA 248
>gi|23501066|ref|NP_697193.1| hypothetical protein BR0155 [Brucella suis 1330]
gi|62289131|ref|YP_220924.1| hypothetical protein BruAb1_0151 [Brucella abortus bv. 1 str.
9-941]
gi|82699070|ref|YP_413644.1| hypothetical protein BAB1_0154 [Brucella melitensis biovar Abortus
2308]
gi|256368619|ref|YP_003106125.1| hypothetical protein BMI_I158 [Brucella microti CCM 4915]
gi|23346933|gb|AAN29108.1| conserved hypothetical protein [Brucella suis 1330]
gi|62195263|gb|AAX73563.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615171|emb|CAJ10110.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|255998777|gb|ACU47176.1| hypothetical protein BMI_I158 [Brucella microti CCM 4915]
Length = 217
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 15 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 74
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 75 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 131
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 132 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 191
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 192 VLIFENNVHMTVDGNTLSA 210
>gi|297247547|ref|ZP_06931265.1| hypothetical protein BAYG_00458 [Brucella abortus bv. 5 str. B3196]
gi|297174716|gb|EFH34063.1| hypothetical protein BAYG_00458 [Brucella abortus bv. 5 str. B3196]
Length = 250
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 48 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 107
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 108 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 164
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 165 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 224
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 225 VLIFENNVHMTVDGNTLSA 243
>gi|254713273|ref|ZP_05175084.1| hypothetical protein BcetM6_07962 [Brucella ceti M644/93/1]
gi|254716374|ref|ZP_05178185.1| hypothetical protein BcetM_08050 [Brucella ceti M13/05/1]
gi|261218156|ref|ZP_05932437.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261320996|ref|ZP_05960193.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260923245|gb|EEX89813.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293686|gb|EEX97182.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 240
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + +MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKFVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|225851688|ref|YP_002731921.1| hypothetical protein BMEA_A0161 [Brucella melitensis ATCC 23457]
gi|256045947|ref|ZP_05448819.1| hypothetical protein Bmelb1R_15659 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256264799|ref|ZP_05467331.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563228|ref|ZP_05833714.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265992357|ref|ZP_06104914.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|225640053|gb|ACN99966.1| protein of unknown function DUF1239 [Brucella melitensis ATCC
23457]
gi|260153244|gb|EEW88336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263003423|gb|EEZ15716.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263095210|gb|EEZ18879.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 240
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFEYNVHMTVDGNTLSA 233
>gi|161618143|ref|YP_001592030.1| hypothetical protein BCAN_A0160 [Brucella canis ATCC 23365]
gi|260567207|ref|ZP_05837677.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|161334954|gb|ABX61259.1| protein of unknown function DUF1239 [Brucella canis ATCC 23365]
gi|260156725|gb|EEW91805.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 240
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 38 AAQRHSVCVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|254709304|ref|ZP_05171115.1| hypothetical protein BpinB_03361 [Brucella pinnipedialis B2/94]
gi|256030827|ref|ZP_05444441.1| hypothetical protein BpinM2_09278 [Brucella pinnipedialis
M292/94/1]
gi|256158852|ref|ZP_05456709.1| hypothetical protein BcetM4_08193 [Brucella ceti M490/95/1]
gi|256254233|ref|ZP_05459769.1| hypothetical protein BcetB_08050 [Brucella ceti B1/94]
gi|260169731|ref|ZP_05756542.1| hypothetical protein BruF5_15498 [Brucella sp. F5/99]
gi|261221382|ref|ZP_05935663.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261316813|ref|ZP_05956010.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261759269|ref|ZP_06002978.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987882|ref|ZP_06100439.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997343|ref|ZP_06109900.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919966|gb|EEX86619.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261296036|gb|EEX99532.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261739253|gb|EEY27249.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|262551811|gb|EEZ07801.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660079|gb|EEZ30340.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 240
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFS-KSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ S K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASSVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 215 VLIFENNVHMTVDGNTLSA 233
>gi|326537890|gb|ADZ86105.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 252
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 50 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 109
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 110 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 166
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 167 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 226
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 227 VLIFEYNVHMTVDGNTLSA 245
>gi|225626694|ref|ZP_03784733.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225618351|gb|EEH15394.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 255
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFS-KSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ S K ++ + ++MK L
Sbjct: 53 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASSVKVEVNTGGETGKLVMKSPHL 112
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 113 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 169
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 170 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 229
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 230 VLIFENNVHMTVDGNTLSA 248
>gi|294851555|ref|ZP_06792228.1| hypothetical protein BAZG_00463 [Brucella sp. NVSL 07-0026]
gi|294820144|gb|EFG37143.1| hypothetical protein BAZG_00463 [Brucella sp. NVSL 07-0026]
Length = 250
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 48 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 107
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 108 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 164
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 165 GRLQLDKDFTVTTDNGLRAQLHSAEVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 224
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 225 VLIFENNVHMTVDGNTLSA 243
>gi|326408177|gb|ADZ65242.1| conserved hypothetical protein [Brucella melitensis M28]
Length = 250
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 48 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 107
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 108 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 164
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 165 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 224
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 225 VLIFEYNVHMTVDGNTLSA 243
>gi|17988075|ref|NP_540709.1| hypothetical protein BMEI1792 [Brucella melitensis bv. 1 str. 16M]
gi|17983825|gb|AAL52973.1| hypothetical protein BMEI1792 [Brucella melitensis bv. 1 str. 16M]
Length = 217
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 15 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 74
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 75 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 131
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 132 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 191
Query: 194 SAVFAGQVSVVVNPGVLQK 212
+F V + V+ L
Sbjct: 192 VLIFEYNVHMTVDGNTLSA 210
>gi|319898206|ref|YP_004158299.1| hypothetical protein BARCL_0015 [Bartonella clarridgeiae 73]
gi|319402170|emb|CBI75696.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 216
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 6/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP---MIMKKF 71
K H ++ L+ P + I F ++ I + + + E + M
Sbjct: 21 KKTYYHSYQVRLLRICLPIFALIIALVFCWFTFFSIFVPFDNVLLRHEEEKIAQLTMLNP 80
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
L Y+ Y + AE+A S GII L++ +PT + G +++ A ++
Sbjct: 81 RLEGYTNFYKPYWIKAEKAFQDRKS-SGIIGLKNITAELPT--GKQGQLFINAEEGAYDN 137
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
N L + +PF + KD + F TA +++ +N+ PV I + F L AN ++
Sbjct: 138 INSRLQLDKPFTVTTKDGIIAQFMTANINLSTNQLNTDQPVNIQSTGFHLMANALQVCEK 197
Query: 192 SRSAVFAGQVSVVVN 206
+ F V ++++
Sbjct: 198 EQVMYFQRGVHIILD 212
>gi|49474846|ref|YP_032887.1| hypothetical protein BH00150 [Bartonella henselae str. Houston-1]
gi|49237651|emb|CAF26831.1| hypothetical protein BH00150 [Bartonella henselae str. Houston-1]
Length = 216
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 6/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST---FSKSSIDLLDFEPMIMKKF 71
K +H R I LKF P +T F ++ + S + + + M
Sbjct: 23 KKASRHSRSISILKFLLPLCALTTALVFCWFTFFFVPVAFDPVISKDEESEMMKLTMLNP 82
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
L Y++ Y L AE+A ++ G+I LQ+ + ++L A ++
Sbjct: 83 KLEGYTRSHEPYWLKAEKAFQD-HTRSGVIGLQNITAE--AFLGKQRRVFLDAQGGNYDN 139
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
N L + +PF++ D + F A +++ +N+ V I + L+AN +I
Sbjct: 140 MNGCLQLDKPFRITTNDGMIAQFMAADINLSEGQLNTDKRVNIRRAGLHLAANALQIREK 199
Query: 192 SRSAVFAGQVSVVVN 206
+ F G V +V +
Sbjct: 200 GQEMYFHGGVHLVFD 214
>gi|153007512|ref|YP_001368727.1| hypothetical protein Oant_0167 [Ochrobactrum anthropi ATCC 49188]
gi|151559400|gb|ABS12898.1| protein of unknown function DUF1239 [Ochrobactrum anthropi ATCC
49188]
Length = 237
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-TFSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++M L
Sbjct: 38 AAQRHSIRVRVLKTALPVAAIIVGAVFSWYTFLATPNAPVKVEVNNGGESGKLVMTSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTASKATQDAKN-SGAISLEGISAELPVGD--KGTAKVEATSGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + D LR +A +++K+ I + PV I + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDDGLRAVLRSADVNLKSGQITTDKPVDIRSGSTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVL 210
+F +V + V+ V+
Sbjct: 215 VLIFENKVRMTVDGSVV 231
>gi|15887686|ref|NP_353367.1| hypothetical protein Atu0335 [Agrobacterium tumefaciens str. C58]
gi|15155241|gb|AAK86152.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 235
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 17 YRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFILS 74
+H ++ LK P + I F+ S IR K S++ E ++M+K ++
Sbjct: 39 ALRHSARVKRLKIILPLSAAIISLAFIAVSVIRTWAPEKVSLESARIEDGKIVMEKPAVA 98
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
++ + YS+ A+RA + ++ L+ VP S + A F+ + +
Sbjct: 99 GRNEKGIDYSMNADRALQDI-ANPNLMTLEKVLAAVPVNDSV---AQVIAQEGIFDRSTN 154
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
TL ++ PF + + + ++ F++A +D+K ++S +PV I +D + A I ++ ++
Sbjct: 155 TLKMTAPFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGSIVAQSIDIADNGKT 214
Query: 195 AVFAGQVSVVVNPGVLQKKE 214
F+GQV + ++ +
Sbjct: 215 ITFSGQVRARIAASNIKNEG 234
>gi|254708605|ref|ZP_05170433.1| hypothetical protein BpinM_17082 [Brucella pinnipedialis
M163/99/10]
Length = 226
Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFS-KSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ S K ++ + ++MK L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASSVKVEVNTGGETGKLVMKSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVV 205
+F V + V
Sbjct: 215 VLIFENNVHMTV 226
>gi|261316111|ref|ZP_05955308.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261305137|gb|EEY08634.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
Length = 241
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 42/192 (21%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFS-KSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ S K ++ + ++MK L
Sbjct: 53 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASSVKVEVNTGGETGKLVMKSPHL 112
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 113 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 169
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + + LR +A +++K+ I + PV I + + A+ +++++ +
Sbjct: 170 GRLQLDKDFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGK 229
Query: 194 SAVFAGQVSVVV 205
+F V + V
Sbjct: 230 VLIFENNVHMTV 241
>gi|319406417|emb|CBI80057.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 216
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 6/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSK---SSIDLLDFEPMIMKKF 71
K H ++ LK PF + I F ++ IS S + + + M
Sbjct: 21 KKTYFHSHKVRLLKICLPFLALIIALIFCWFTFFSISFSFDKVLLSHEEEEIAQLTMLNP 80
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
L Y+ Y + AE+A S GII L++ VPT+ G +++ A ++
Sbjct: 81 RLESYTNFHKPYWIKAEKAFQDRKS-SGIIGLKNITAEVPTKG--QGQIFIDAQGGVYDN 137
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
L +++PF + KD + F A +D+ N+ PV I ++F L AN ++
Sbjct: 138 IKSHLQLNEPFTVTTKDGIIAKFIAANIDLSKSQFNTDQPVNIQSANFHLIANALQVCEK 197
Query: 192 SRSAVFAGQVSVVVN 206
+ F V +V++
Sbjct: 198 EQVMYFQRGVRIVLD 212
>gi|121602696|ref|YP_989617.1| hypothetical protein BARBAKC583_1370 [Bartonella bacilliformis
KC583]
gi|120614873|gb|ABM45474.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 214
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP----MIMKKFILSD 75
H R+I LK F PF I F ++ +ST S ++ L + E + M L
Sbjct: 26 HSRWIHVLKIFLPFFAFIIALVFCWFTFFSVST-SFETVILNNGEDGITALTMVDPRLEG 84
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
Y+ Y L AE+A + G++ L++ VP + ++L A ++ +N
Sbjct: 85 YTSSNQPYQLKAEKAFQD-HMRLGVVELENITAEVPASKQVS--VFLQAQRGIYDNSNTH 141
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
L +++PF MK KD L F A +++ + + V I ++DF L+A R+ +
Sbjct: 142 LQLNKPFTMKTKDGLVAQFMAADINLSEGQLKTDQRVDIYNADFSLTAGNLRVCEKGQIM 201
Query: 196 VFAGQVSVVVN 206
F G V ++++
Sbjct: 202 HFQGGVHLLIS 212
>gi|319407889|emb|CBI81541.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 214
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 6/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSI---DLLDFEPMIMKKF 71
K H I+ LK F P + I F + +S S S + + + +IM
Sbjct: 21 KKAYHHSCRIRLLKIFLPLVALIIALVFSWFIFFSLSASSGSVVLKNEDDEIVKLIMVNP 80
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
L Y+ Y L A+ A + ++ LQ +P + G +L A S ++
Sbjct: 81 RLESYTSSHKLYWLEAQEAFQD-SLHSEVVGLQGITAEIP--SGKLGTAFLQAQSGTYDH 137
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
N+ L + +PF +K +DN+ F A +D+ + + V I + L AN +I
Sbjct: 138 INNHLKLDKPFTVKTQDNMVAQFIAADIDLSESQLKTDQCVHIKRAGLSLKANTLQIHEK 197
Query: 192 SRSAVFAGQVSVVVN 206
+ F G V +V++
Sbjct: 198 GQKIYFQGDVHLVID 212
>gi|240849696|ref|YP_002971084.1| hypothetical protein Bgr_00140 [Bartonella grahamii as4aup]
gi|240266819|gb|ACS50407.1| hypothetical protein Bgr_00140 [Bartonella grahamii as4aup]
Length = 214
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP----MIMKK 70
K +H R I LK F P + F ++ + S S+ L + E + M
Sbjct: 21 KKASRHSRRISVLKIFLPLLALISALVFCWFTFFLVPVTSD-SMPLNNEESGVVNLTMLN 79
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
L Y++ Y L AE+A ++ G+I LQ+ + ++L A ++
Sbjct: 80 PKLEGYTRAHEPYWLKAEKAFQD-HTHSGMIGLQNITAK--AFMGQQKQVFLAAQGGVYD 136
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
N L + +PF + D + + F +A +++ + + V I + L+AN +I
Sbjct: 137 NINGFLQLDKPFTITTNDGIMVQFMSASINLSEGQLKTDQRVNIQQAGLHLAANALQIRE 196
Query: 191 SSRSAVFAGQVSVVV 205
++ F G V +V+
Sbjct: 197 KGKNMYFHGGVHLVL 211
>gi|325291770|ref|YP_004277634.1| hypothetical protein AGROH133_03501 [Agrobacterium sp. H13-3]
gi|325059623|gb|ADY63314.1| hypothetical protein AGROH133_03501 [Agrobacterium sp. H13-3]
Length = 221
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFIL 73
+ +H ++ LK P I F+ S IR + S++ E ++M+K +
Sbjct: 24 RALRHSARVKRLKIILPLGAAIISFAFVAVSLIRTWAPEEVSLESARIEDGKIVMEKPAV 83
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ ++ + YS+ A+RA + ++ L+ VP S + A F+ A
Sbjct: 84 AGRNEKGIDYSMNADRALQDI-ANPNLMTLERVLAAVPVNDSV---AQVIAKEGIFDRAT 139
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+TL ++ PF + + + ++ F++A +D+K ++S +PV I +D + A I ++ +
Sbjct: 140 NTLKMTAPFDINLSNGIQAKFQSADVDLKAGKMSSKEPVSIKTNDGAIVAQSIDIADNGK 199
Query: 194 SAVFAGQVSVVVNPGVLQKKE 214
+ F+GQV + ++ +
Sbjct: 200 TITFSGQVRARIAASNIKNEG 220
>gi|49473701|ref|YP_031743.1| hypothetical protein BQ00140 [Bartonella quintana str. Toulouse]
gi|49239204|emb|CAF25521.1| hypothetical protein BQ00140 [Bartonella quintana str. Toulouse]
Length = 222
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 8/197 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSI-----DLLDFEPMIMK 69
K +H I LKFF P + F ++ + I + + M
Sbjct: 27 KKASRHSYRIGILKFFLPLCALATALVFCWFTFFFVPAACDPVILNDEENGAMAMKLTML 86
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L Y++ Y AE+A + G++ LQ+ + G +++ A +
Sbjct: 87 NPKLEGYTRSHEPYWFKAEKAFQD-RTRSGVVGLQNITAETFV--GKQGRVFIDAQGGVY 143
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ N L +++PF + D + F TA + + +++ V I + L+AN +I
Sbjct: 144 DNINGCLQLNKPFTITTSDGMIAQFMTADISLSEGQLSTDQRVNIQRAGLHLAANGLQIR 203
Query: 190 NSSRSAVFAGQVSVVVN 206
++ F G V +V++
Sbjct: 204 KKGQNIYFYGGVHLVLD 220
>gi|306842558|ref|ZP_07475209.1| Hypothetical protein BIBO2_2337 [Brucella sp. BO2]
gi|306287414|gb|EFM58894.1| Hypothetical protein BIBO2_2337 [Brucella sp. BO2]
Length = 197
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 23 FIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFILSDYSKDR 80
++ LK P A + + F +++ K ++ + ++MK L+ Y+KD
Sbjct: 2 RVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHLNGYTKDN 61
Query: 81 VKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQ 140
YS+ A +A + G I L+ +P E G + A S ++ AN L + +
Sbjct: 62 RPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNANGRLQLDK 118
Query: 141 PFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQ 200
F + + LR +A +++K+ I + PV I + + A+ +++++ + +F
Sbjct: 119 DFTVTTDNGLRAQLHSADVNLKSGQIATDKPVDIRNGTTHILADSMQVKDNGKVLIFENN 178
Query: 201 VSVVVNPGVLQK 212
V + V+ L
Sbjct: 179 VHMTVDGNTLSA 190
>gi|163757834|ref|ZP_02164923.1| hypothetical protein HPDFL43_20527 [Hoeflea phototrophica DFL-43]
gi|162285336|gb|EDQ35618.1| hypothetical protein HPDFL43_20527 [Hoeflea phototrophica DFL-43]
Length = 226
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 13 QRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDF--EPMIMKK 70
+ + + H R ++ LK P A+V +V F+ S++ +I+ + ++M+
Sbjct: 22 EYRRAQTHSRRVRALKILLPLASVLVVIGFVAVSFVDTLVPEGVAIESVAVRDGKLVMQN 81
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
++S + D Y L A RA + +I L+D +P E L A SA F+
Sbjct: 82 PVMSGQTSDARSYRLEALRAIQDLAT-PDVIVLEDILAELPVSAGETA--VLEATSATFD 138
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
TL +PFK++ + + ++A +D+ +++SDPV I + + A ++++
Sbjct: 139 RGAQTLVFREPFKVQSEGGFSAEMQSADIDMATSEMSTSDPVTIRSGEASVVAKSMKMQD 198
Query: 191 SSRSAVFAGQVSVVVNPGVLQKK 213
R + QV + +NP +++
Sbjct: 199 KGRLIILENQVRMTINPSAIKQP 221
>gi|239831004|ref|ZP_04679333.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823271|gb|EEQ94839.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 237
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-TFSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A V + F +++ T K ++ + ++M L
Sbjct: 38 AAQRHSVRVRVLKTALPVAAVIVAAVFSWYTFLATPNTPIKVEVNNGGESGKLVMTSPHL 97
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 98 NGYTKDNRPYSMTAAKATQDAKN-SGAISLEGISAELPV--GEKGMAKVEATSGVYDNAN 154
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L + + F + D LR +A +++K+ I + PV I + A+ +++++ +
Sbjct: 155 GRLQLDKDFTVTTDDGLRAVMHSADVNLKSGQITTDKPVDIRSGSTHILADSMQVKDNGK 214
Query: 194 SAVFAGQVSVVVNPGVL 210
+F +V + V+ V+
Sbjct: 215 VLIFENKVRMTVDGSVV 231
>gi|319404927|emb|CBI78527.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 216
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTF---SKSSIDLLDFEPMIMKKF 71
K H ++ LK F P + I F ++ I + + + + M
Sbjct: 21 KKTYFHSHQVRLLKIFLPLLALIIALIFCWFTFFSIFVSFDKVLLNHEEEEIAQLTMLNP 80
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
L Y+ Y + AE+A S GII L++ VPT+ G +++ A ++
Sbjct: 81 RLEGYTNFHKPYKIKAEKAFQDRKS-SGIIGLKNITAEVPTEGR--GQIFIDAQGGIYDN 137
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
L + +PF + +D + F TA +D+ N+ PV I + F L AN +I
Sbjct: 138 IKSHLKLDEPFTVTTQDGIIAKFTTAKIDLSKSQFNTDQPVNIQSAGFHLMANALQIYGK 197
Query: 192 SRSAVFAGQVSVVVN 206
+ F V +V++
Sbjct: 198 EQVMYFQKGVRIVLD 212
>gi|110635995|ref|YP_676203.1| hypothetical protein Meso_3670 [Mesorhizobium sp. BNC1]
gi|110286979|gb|ABG65038.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 235
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE--PMIMKKFI 72
++ +H R ++ LKF P V I G FL S I + ++D E ++M
Sbjct: 28 ARAARHSRRVRVLKFVLPAVAVAISGLFLGYSLIAPTGIHALNLDSATIEGGSLVMHNPS 87
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ ++ + YS+ A A+ + G I L+ + T+P + A FN A
Sbjct: 88 LNGFTSGNLPYSVTAALARQEVGADSGPIELEKIQATLPIDSGRQA--LVTAGGGVFNQA 145
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
+ L ++ ++ + ++A +D+ + +++ +PV I + + A +
Sbjct: 146 TNQLLLNNAITVESNAGISAQLKSAAVDMSSGNLSTDEPVDIEVNGMRVRAKSFHTVDGL 205
Query: 193 RSAVFAGQVSVVVNPGVLQKKE 214
VF V + ++P +++ +
Sbjct: 206 ERLVFENGVRLEIDPASVRRAQ 227
>gi|90420562|ref|ZP_01228469.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335290|gb|EAS49043.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 260
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 6/195 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP--MIMKKFI 72
++ R+H R ++ LK P IV + +W+ S S++ E ++M+
Sbjct: 56 ARARRHSRLVRILKIGLPALAAIIVVGGIAVTWVARSLPEDFSVNGTSIEDGRIVMQDPR 115
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
+S Y LVAERA + G G + L+ + D+ A S +++
Sbjct: 116 MSGIDGKNRPYELVAERAIQAL--GGGGVDLETIAAKIAIDDEISADIK--AASGKYDPT 171
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
TL ++ ++ + + + A +D+ + + PV I + + A+ + N
Sbjct: 172 AETLVLAGGVRVATTNGITISLSAADIDIASGALKGEGPVRIETPEQTIEASSLNLTNGG 231
Query: 193 RSAVFAGQVSVVVNP 207
F G+V +++ P
Sbjct: 232 DVITFGGRVKMLLRP 246
>gi|319403503|emb|CBI77082.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 154
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 62 DFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMY 121
+ + M L Y+ Y + AE+A S GII L++ VPT+ G ++
Sbjct: 9 EIAQLTMLNPRLEGYTNFHKPYWIKAEKAFQDRKS-SGIIGLKNITAEVPTKG--QGQIF 65
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVL 181
+ A ++ L ++PF + KD + F A +D+ N+ PV I ++F L
Sbjct: 66 IDAQGGVYDNIKSHLQFNEPFTVTTKDGIIAKFIAANIDLSKSQFNTDQPVNIQSANFHL 125
Query: 182 SANFARIENSSRSAVFAGQVSVVVN 206
AN ++ + F V +V++
Sbjct: 126 IANALQVCEKEQVMYFQKGVRIVLD 150
>gi|261884101|ref|ZP_06008140.1| hypothetical protein CfetvA_02306 [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 166
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-FSKSSID-LLDFEPMIMKKFIL 73
++H ++ LK P A + + F +++ K ++ + ++MK L
Sbjct: 16 AAQRHSVRVRVLKTALPVAAIALAAVFSWYTFLATPASPVKVEVNTGGETGKLVMKSPHL 75
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ Y+KD YS+ A +A + G I L+ +P E G + A S ++ AN
Sbjct: 76 NGYTKDNRPYSMTAAKATQDVKN-SGAITLEGISARLPV--GEKGHATVEAASGVYDNAN 132
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITI 166
L + + F + + LR + +++K+ I
Sbjct: 133 GRLQLDKDFTVTTDNGLRAQLHSEDVNLKSGQI 165
>gi|114706453|ref|ZP_01439355.1| hypothetical protein FP2506_01675 [Fulvimarina pelagi HTCC2506]
gi|114538314|gb|EAU41436.1| hypothetical protein FP2506_01675 [Fulvimarina pelagi HTCC2506]
Length = 224
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP--MIMKKFIL 73
+ + + ++ LK P IV + + + + I E ++M L
Sbjct: 7 RAARSQKRVRVLKIVLPLIGGIIVLGGIGVTMLARAIPDDVRITGASIEDGRVVMDDPRL 66
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
S + + LVA++A + G I L+ + V ++ A S ++
Sbjct: 67 SGVDSNDRPFELVAQKAMQAI--TGGAIDLEGIDAKVAVSDETKA--FIRASSGHYDPNA 122
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
L ++ ++ D L+++ ++A +D+ T+ + +PV I +D + AN + +
Sbjct: 123 QMLKLAGGMSVETDDGLQVEMKSAGIDLGQGTLTTEEPVHIRTADQEIRANGMSLSENGD 182
Query: 194 SAVFAGQVSVVVNPGV 209
F+G VS+ +NP
Sbjct: 183 RIRFSGGVSMKLNPAS 198
>gi|218672975|ref|ZP_03522644.1| hypothetical protein RetlG_15795 [Rhizobium etli GR56]
Length = 111
Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 103 LQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVK 162
L+ + VP + A +A +N A L+++ PF + + L F++A LD+K
Sbjct: 1 LETIKAAVPMNDGLIA--RVVASTADYNRATDNLHMTAPFTLVLSSGLNAKFQSARLDIK 58
Query: 163 NITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ S DPV IT + + A I + R F G V + V+P + K+
Sbjct: 59 GGNMRSDDPVTITKDNASIVAKTLEITDKGRVITFEGNVRMNVDPSTIHKQG 110
>gi|91974657|ref|YP_567316.1| hypothetical protein RPD_0175 [Rhodopseudomonas palustris BisB5]
gi|91681113|gb|ABE37415.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 256
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 69/204 (33%), Gaps = 8/204 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-TFSKSSID----LLDFEPMIMK 69
+ +H R ++ L+ P + L S SK ID ++ + M+
Sbjct: 18 AAAARHSRLVRTLRVAVPLVVALSLAAILAISIFNPFRLLSKLPIDIGDLVVSGTKITME 77
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D Y + A A + + + L V + + + A +F
Sbjct: 78 SPHLAGFTNDGRPYEMWARSATQDL-TSQDHVDLHTLRAKVVSDD--QSTVLIQARDGKF 134
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
N L + + ++ A +D+ ++S +PV + L RI
Sbjct: 135 NTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMGKGNVSSDEPVDVKWLGGTLRGQRLRIT 194
Query: 190 NSSRSAVFAGQVSVVVNPGVLQKK 213
F G V + ++ L +
Sbjct: 195 EKGDVIRFEGGVVMNLDNANLPEP 218
>gi|304392223|ref|ZP_07374165.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303296452|gb|EFL90810.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 250
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 80/194 (41%), Gaps = 5/194 (2%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSI--DLLDFEPMIMKKFI 72
++ ++H ++ ++ P +V F + + + + ++M++
Sbjct: 42 ARAQRHSVAVRISRWALPGVATFMVLVFAGQTLWNWTPLGNIQVLSSAISNGKLVMEEPK 101
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
+ + ++ Y + A RA + G + L + +P + + + A S ++
Sbjct: 102 MKGFDANKRPYDVKAARAVQDL-TKPGFVELTAIDAKLPMDANSFAQ--VDAGSGVYDQK 158
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
T+ + + + + + A +D+K+ ++ S PV + + + A ++++
Sbjct: 159 AETMRLFDSVVITGARGMDIRLDDAEIDIKSGSMKSDKPVTVVRGETTIDAASVEVQDNG 218
Query: 193 RSAVFAGQVSVVVN 206
+ +F +V +++N
Sbjct: 219 KRVLFKERVKMIIN 232
>gi|86747784|ref|YP_484280.1| hypothetical protein RPB_0658 [Rhodopseudomonas palustris HaA2]
gi|86570812|gb|ABD05369.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 243
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 8/197 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
+ +H R ++ L+ P + + S + ++ + M+
Sbjct: 6 AAAARHSRLVRTLRIAVPLVVALSMAAIIAISLFNPFRLLSKLPLEVGDLVVSGTKITME 65
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
++ ++ D Y + A A + + + L V + + + A +F
Sbjct: 66 SPHMAGFTDDGRPYEMWARSATQDL-TSQDHVDLHTLRAKVVSDD--QSTVLIEARDGKF 122
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
N L + + ++ A +D+ T+ S +PV + L RI
Sbjct: 123 NTKAQLLNLQKDVYLRTSTGSEAWMTQADIDMSKGTVASDEPVDVKWLGGTLRGQRLRIT 182
Query: 190 NSSRSAVFAGQVSVVVN 206
F G V + ++
Sbjct: 183 EKGDVIRFEGGVVMNLD 199
>gi|90421942|ref|YP_530312.1| hypothetical protein RPC_0418 [Rhodopseudomonas palustris BisB18]
gi|90103956|gb|ABD85993.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 244
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 65/198 (32%), Gaps = 8/198 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
+ +H R ++ L+ P A + + + S ++ + M+
Sbjct: 14 AAAARHSRLVRLLRVAVPLAVLLAMAAIVAVSVFNPFRFLAKLPVDMGNLVVSGTKITME 73
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
LS +S D+ Y L A+ A + + L + TQ + + A F
Sbjct: 74 SPHLSGFSPDQRPYELWAKTATQDL-TTPDHVDLATLRAKLLTQD--QATVTVDARQGLF 130
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ L + + + A +D+ T+ S +PV + L R+
Sbjct: 131 DTKAQLLDLRKDVYLLSSTGYEAWMTRAFIDIGKGTVVSDEPVDVKWQGGTLRGQRMRVT 190
Query: 190 NSSRSAVFAGQVSVVVNP 207
F G V + ++
Sbjct: 191 EKGEIVRFEGGVVMNLDG 208
>gi|27375831|ref|NP_767360.1| hypothetical protein blr0720 [Bradyrhizobium japonicum USDA 110]
gi|27348969|dbj|BAC45985.1| blr0720 [Bradyrhizobium japonicum USDA 110]
Length = 244
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 75/194 (38%), Gaps = 9/194 (4%)
Query: 19 QHVRFIQFLKFFFP------FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFI 72
+H R ++ L+ P A + V F + S ++ + M+
Sbjct: 22 RHSRLVRILRVAVPGAVLLSLAAIVGVSIFNPFRMLLPKLPLDSGNLVVSGTKITMESPH 81
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
L+ Y+ DR Y L A+ A + + L D V + ++L A + RF+
Sbjct: 82 LAGYTPDRRPYELWAKTATQDI-TDPDHVDLSDLRAKVLMED--QSTLFLDARTGRFDNK 138
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
L + + ++ +A +D+ T++S + V + ++ L+A+ RI
Sbjct: 139 QQQLDLHKDIFLRTSTGYEARLNSAFVDMGKGTVSSDERVDVKLTNGTLTADRLRITEGG 198
Query: 193 RSAVFAGQVSVVVN 206
F G V + ++
Sbjct: 199 DLIRFEGNVVMHLD 212
>gi|316931443|ref|YP_004106425.1| hypothetical protein Rpdx1_0048 [Rhodopseudomonas palustris DX-1]
gi|315599157|gb|ADU41692.1| protein of unknown function DUF1239 [Rhodopseudomonas palustris
DX-1]
Length = 242
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 65/204 (31%), Gaps = 8/204 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
+ +H R ++ L+ P V + + S ++ + M+
Sbjct: 13 AAAARHSRLVRTLRVAVPLVVVLSMAVIVAISIFNPFRYLTNLPLDIGDLVVSGTKITME 72
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
++ ++ D Y + A A + + + L V Q + + + A +F
Sbjct: 73 SPHMAGFTNDGRPYEMWARSATQDL-TSQDHVDLHTLRAKV--QSEDQSTVVIEAREGQF 129
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
L +++ + A +D+ T+ S PV + L RI
Sbjct: 130 QTKAQLLKLNKDVYLHNSSGTEAWMTQADVDMGQGTVTSDAPVDVKWEGGTLRGQRMRIT 189
Query: 190 NSSRSAVFAGQVSVVVNPGVLQKK 213
F G V + ++ L +
Sbjct: 190 EKGDLIRFEGGVVMNLDNAALAEP 213
>gi|192288481|ref|YP_001989086.1| hypothetical protein Rpal_0048 [Rhodopseudomonas palustris TIE-1]
gi|192282230|gb|ACE98610.1| protein of unknown function DUF1239 [Rhodopseudomonas palustris
TIE-1]
Length = 246
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 8/201 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
+ +H R ++ L+ P V + + S ++ + M+
Sbjct: 18 AAAARHSRLVRTLRLAVPLVVVLSMAVIIAISIFNPFRYLSKLPIDVGDLVVSGTKITME 77
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D Y + A A + + + L V Q + + + + +F
Sbjct: 78 SPHLAGFTNDGRPYEMWARTATQDL-TSQDHVDLHTLRAKV--QSEDQSTVIIESREGQF 134
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
L +++ + A +D+ T+ S PV + L RI
Sbjct: 135 ETKAQLLKLNKDVYLHNSTGTEAWMTQADIDMGKGTVTSDSPVDVKWDGGTLRGQRMRIT 194
Query: 190 NSSRSAVFAGQVSVVVNPGVL 210
F G V + ++ L
Sbjct: 195 EKGDLIRFEGGVVMNIDNASL 215
>gi|39933127|ref|NP_945403.1| hypothetical protein RPA0047 [Rhodopseudomonas palustris CGA009]
gi|39652752|emb|CAE25491.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 246
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 8/201 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
+ +H R ++ L+ P V + + S ++ + M+
Sbjct: 18 AAAARHSRLVRTLRLAVPLVVVLSMAVIIAISIFNPFRYLSKLPIDVGDLVVSGTKITME 77
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D Y + A A + + + L V Q + + + + +F
Sbjct: 78 SPHLAGFTNDGRPYEMWARTATQDL-TSQDHVDLHTLRAKV--QSEDQSTVIIESREGQF 134
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
L +++ + A +D+ T+ S PV + L RI
Sbjct: 135 ETKAQLLKLNKDVYLHNSTGTEAWMTQADIDMGKGTVTSDSPVDVKWDGGTLRGQRMRIT 194
Query: 190 NSSRSAVFAGQVSVVVNPGVL 210
F G V + ++ L
Sbjct: 195 EKGDLIRFEGGVVMNIDNASL 215
>gi|115522455|ref|YP_779366.1| hypothetical protein RPE_0427 [Rhodopseudomonas palustris BisA53]
gi|115516402|gb|ABJ04386.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 232
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 8/197 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-TFSKSSID----LLDFEPMIMK 69
+ +H R ++ L+ P A + + S +K +D ++ + M+
Sbjct: 18 AVAARHSRLVRILRVAVPLAVALAMAGIVAVSVFNPFRLLAKLPLDMGNLVVSGTRVTME 77
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
LS +S D Y L A+ A + + L V T + + A + F
Sbjct: 78 APHLSGFSPDGRPYELWAKAATQDL-TRPDHVDLATIRAKVVTDD--QSTVTIDARNGVF 134
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ L + + ++ + A++D+ T+NS +PV + L RI
Sbjct: 135 DTKAQLLDLRKDVYLQSSGGYQAWMTQALVDLGKGTVNSDEPVDVVWQGGTLRGQKLRIS 194
Query: 190 NSSRSAVFAGQVSVVVN 206
F G V + ++
Sbjct: 195 ERGELIRFEGGVVMNLD 211
>gi|254471142|ref|ZP_05084545.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211960284|gb|EEA95481.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 217
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 5/202 (2%)
Query: 14 RSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR-ISTFSKSSIDLLDFEPMIMKKFI 72
R R+H ++ L+F P + I + + I L E ++M
Sbjct: 20 RKAARRHSILVRLLRFALPAGGLLIAAGVIAMVVFQNILAGLSIGDISLTTEGLVMSNPH 79
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
LS + Y++ A+RA + +I L++ + E + + + + F+
Sbjct: 80 LSG-NDGDRSYNVQADRAIQRI-TNPQVIDLENIVAEITIAPGE--TVSITSRNGTFDTE 135
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
TL ++ + +FE +D+K TI ++D V +T + A + +
Sbjct: 136 METLNLTNGITVAYSKGYSAEFEYLDIDMKTGTIQTNDTVDVTSEGGYIDAGSMEFDQKN 195
Query: 193 RSAVFAGQVSVVVNPGVLQKKE 214
F V + + P L+ +
Sbjct: 196 NVLNFRRGVKMKLLPWALENGQ 217
>gi|92115810|ref|YP_575539.1| hypothetical protein Nham_0178 [Nitrobacter hamburgensis X14]
gi|91798704|gb|ABE61079.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 258
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 68/196 (34%), Gaps = 8/196 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
++ +H R ++ L+ P ++ + + + ++ + M+
Sbjct: 22 ARAARHSRMVRALRIAVPAVVGLVMAALIAVAVFNPFRALAKLPLEMDNLVVSGTKITME 81
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
LS ++ D+ Y + A A + + L V + + L + + F
Sbjct: 82 SPHLSGFTPDKRPYEMQATTATQDI-TDPDHVELHTLRAKVLMEDR--STVTLNSRTGVF 138
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ L + + M+ A++D+ T+ S PV + + L+A+ ++
Sbjct: 139 DTKTQMLDLHKDILMQSSTGYEARLSHALVDMGQGTVTSDQPVDVKLLNGTLTADTMKVT 198
Query: 190 NSSRSAVFAGQVSVVV 205
F V + +
Sbjct: 199 EKGDVVRFENNVVMHL 214
>gi|148251745|ref|YP_001236330.1| hypothetical protein BBta_0124 [Bradyrhizobium sp. BTAi1]
gi|146403918|gb|ABQ32424.1| hypothetical protein BBta_0124 [Bradyrhizobium sp. BTAi1]
Length = 233
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 8/197 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSID-----LLDFEPMIMK 69
+ +H RF++ L+ P A + + + ++ + ++ + M+
Sbjct: 18 AVAARHSRFVRVLRVAVPAAVGLAMAVVIGVALFNPFHMEINTKNLTGNLVISGRKITME 77
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D+ Y LVA+ A + + L V + + L A + F
Sbjct: 78 TPHLTGFTPDQRPYDLVAKSAVQDL-TDPDHVELNILRAKVLMED--QSTVTLNAKTGVF 134
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ L + + + A +D+ T++S + V + ++ LSA+ RI
Sbjct: 135 DTKQQQLDLKKDILLTTSSGYEARLSRAFVDMAKGTVSSDERVDVKLTNGTLSADRLRIT 194
Query: 190 NSSRSAVFAGQVSVVVN 206
++ F G V + ++
Sbjct: 195 DNGDVVRFEGNVVMNLD 211
>gi|163851921|ref|YP_001639964.1| hypothetical protein Mext_2498 [Methylobacterium extorquens PA1]
gi|218530672|ref|YP_002421488.1| hypothetical protein Mchl_2721 [Methylobacterium chloromethanicum
CM4]
gi|240139044|ref|YP_002963519.1| hypothetical protein MexAM1_META1p2463 [Methylobacterium extorquens
AM1]
gi|254561639|ref|YP_003068734.1| hypothetical protein METDI3226 [Methylobacterium extorquens DM4]
gi|163663526|gb|ABY30893.1| protein of unknown function DUF1239 [Methylobacterium extorquens
PA1]
gi|218522975|gb|ACK83560.1| protein of unknown function DUF1239 [Methylobacterium
chloromethanicum CM4]
gi|240009016|gb|ACS40242.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254268917|emb|CAX24878.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 252
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 77/218 (35%), Gaps = 9/218 (4%)
Query: 2 DHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLL 61
+ RR + + R+H ++ L+ P V T S ++
Sbjct: 19 NENARRKR---AHGRARRHSAQVRTLRRVIPVTAGIAVLGLAAIVLWSPLTGSIPNVSFG 75
Query: 62 DFE----PMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEY 117
+ M+ LS + K Y +VA+ A+ II LQ + V T
Sbjct: 76 PISVSGTKVTMENPRLSGFRKGERGYEVVADAAQQDVR-KPSIIELQAMKGHVATDDKG- 133
Query: 118 GDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHS 177
G YL A F+ +L + ++ + A +D K ++ SS V +T
Sbjct: 134 GRAYLQAQGGVFDSTRESLNLENDIRLWTDKGEEVRLSVATVDFKTGSLRSSKAVTVTVP 193
Query: 178 DFVLSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
+ A+ + + R F G+V V + +K+
Sbjct: 194 SGSIVADTLDVVENGRVVSFVGRVHAVFHGDEAEKESG 231
>gi|170743377|ref|YP_001772032.1| hypothetical protein M446_5274 [Methylobacterium sp. 4-46]
gi|168197651|gb|ACA19598.1| protein of unknown function DUF1239 [Methylobacterium sp. 4-46]
Length = 245
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 9/211 (4%)
Query: 4 LDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDF 63
LD R L + + H ++FL+ P + + + +W+ ++ L +
Sbjct: 19 LDSRR--LRAHRRAQAHSARVRFLRRAIPLGSAAAILAVVAVTWLDPFGALGVTVTLGEV 76
Query: 64 E----PMIMKKFILSDYS-KDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
+ M++ L+ Y KD Y + A A +I LQ + + +
Sbjct: 77 SVSGSKVTMERPRLTGYRGKDGRPYEVTARAALQDVR-RPTVIELQSMRGQMQSDEAGTL 135
Query: 119 DMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSD 178
+L A S F+ +L +S+ ++ +A ++ K T+ S +PV +T +
Sbjct: 136 S-HLEAQSGVFDTQRESLDLSRSIRLWTDKGQEARLSSAQVNFKAGTLTSREPVSVTLPN 194
Query: 179 FVLSANFARIENSSRSAVFAGQVSVVVNPGV 209
+ A+ + + ++ F G V V + GV
Sbjct: 195 GTIQADALDVVENGKTISFIGNVKTVFDGGV 225
>gi|75674371|ref|YP_316792.1| hypothetical protein Nwi_0172 [Nitrobacter winogradskyi Nb-255]
gi|74419241|gb|ABA03440.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 230
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 66/196 (33%), Gaps = 8/196 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMK 69
++ +H R ++ L+ P A + + + ++ + M+
Sbjct: 22 ARAARHSRMVRTLRIAVPAAVGLAMAGLIGVAAFNPFRTLANLPLDMDNLVVSGTKITME 81
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D+ Y + A A + + L V + + L + + F
Sbjct: 82 SPRLAGFTPDKRPYEMQATTATQDV-ADPDHVELHTLRAKVLMEDRT--TVTLNSRTGVF 138
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
N L + + M A++D+ T+ S PV + + L+A+ ++
Sbjct: 139 NTKTQVLDLRKDILMLSSTGYEARLTHAIVDMGRGTVTSDQPVDVKLLNGTLTADTMQVT 198
Query: 190 NSSRSAVFAGQVSVVV 205
F V + +
Sbjct: 199 EKGDVVRFENNVVMHL 214
>gi|85714032|ref|ZP_01045021.1| hypothetical protein NB311A_07748 [Nitrobacter sp. Nb-311A]
gi|85699158|gb|EAQ37026.1| hypothetical protein NB311A_07748 [Nitrobacter sp. Nb-311A]
Length = 218
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 8/196 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST-----FSKSSIDLLDFEPMIMK 69
++ +H R ++ L+ P A + + + ++ + M+
Sbjct: 10 ARAARHSRMVRVLRIAVPGAVGLAMAALIGIATFNPFHALANLPLDMDNLVVSGTKITME 69
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D+ Y + A A + + L V + + L +H+ F
Sbjct: 70 SPRLAGFTPDKRPYEMQATTATQDV-TDPDRVELHTLRAKVLMEDD--STVTLNSHTGMF 126
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
N L + + M+ A++D+ T+ S PV + + L+A+ ++
Sbjct: 127 NTKTQILDLQKDIFMRSSTGYEARLTHAMVDMGRGTVTSDQPVDVKLLNGTLTADTMQVT 186
Query: 190 NSSRSAVFAGQVSVVV 205
F V + +
Sbjct: 187 EKGDVVRFENNVVMHL 202
>gi|299133325|ref|ZP_07026520.1| protein of unknown function DUF1239 [Afipia sp. 1NLS2]
gi|298593462|gb|EFI53662.1| protein of unknown function DUF1239 [Afipia sp. 1NLS2]
Length = 233
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 8/199 (4%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMKK 70
+ +H R +++L+ P + + + +S S + + M
Sbjct: 17 RAARHSRRVRWLRRAVPAVVILSLALIIGASVFNPFRFLKKLPIDLSKLSVSGTKITMDA 76
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
L+ Y DR Y + A+ A + + + D V Q + + A + F+
Sbjct: 77 PHLAGYLPDRRPYEVWAKAATQDV-TDPTKVDMLDIRAQVQMQD--KSTLRVDAQNGHFD 133
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
L ++ ++ + A +D+ I+S PV + ++ L++ RI +
Sbjct: 134 TKTQLLDLTNQILLQTTTGYQAQLTQARVDLATGIISSDQPVAVKLTNGTLNSQNLRITD 193
Query: 191 SSRSAVFAGQVSVVVNPGV 209
SAVF G V+++++P
Sbjct: 194 HGASAVFGGGVTMLLDPPA 212
>gi|220925752|ref|YP_002501054.1| hypothetical protein Mnod_5923 [Methylobacterium nodulans ORS 2060]
gi|219950359|gb|ACL60751.1| protein of unknown function DUF1239 [Methylobacterium nodulans ORS
2060]
Length = 240
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 7/195 (3%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKFILSD 75
H ++FL+ P + V +W+ ++ L + + M+ L+
Sbjct: 28 HSAQVRFLRLAIPLGSAAAVLAVAAVTWLDPFGALGVTVSLGEVSVSGSKVTMESPRLTG 87
Query: 76 YS-KDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
Y KD Y + A+ A +I LQ+ + + + +L A S F+
Sbjct: 88 YRGKDGRPYEVTAKAALQDVR-RPTVIELQNMKGHMQADETG-ALSHLEALSGVFDTQKE 145
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
+L +S+ ++ +A ++ K T+NS +PV +T + + ++ + ++ R+
Sbjct: 146 SLELSRSIRLWTDKGQEARLSSAQVNFKAGTMNSREPVTVTLPNGTIRSDGLEVVDNGRT 205
Query: 195 AVFAGQVSVVVNPGV 209
F G V V + GV
Sbjct: 206 ISFIGNVKTVFDGGV 220
>gi|146337289|ref|YP_001202337.1| hypothetical protein BRADO0116 [Bradyrhizobium sp. ORS278]
gi|146190095|emb|CAL74087.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 236
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 8/197 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSID-----LLDFEPMIMK 69
+ +H RF++ L+ P + + ++ + + + ++ + M+
Sbjct: 18 AVAARHSRFVRALRIAVPAVVGVAMTVVIYVAFFNDFRVAVDTGNLTGNVVISGRKITME 77
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
L+ ++ D+ Y LVA A + + L V + + L A + F
Sbjct: 78 TPHLTGFTPDQRPYDLVAHSAVQDL-TDPDHVELNILRAKVLMED--QSTVTLKAATGLF 134
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ L + + + A +D+ T++S + V + ++ LSA+ RI
Sbjct: 135 DTKQQQLELKKDILLTTSTGYEARLSRASVDMAKGTVSSDERVDVKLTNGTLSADRLRIT 194
Query: 190 NSSRSAVFAGQVSVVVN 206
++ F G V + ++
Sbjct: 195 DNGEVIRFEGNVVMNLD 211
>gi|298290362|ref|YP_003692301.1| hypothetical protein Snov_0349 [Starkeya novella DSM 506]
gi|296926873|gb|ADH87682.1| conserved hypothetical protein [Starkeya novella DSM 506]
Length = 325
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 76/202 (37%), Gaps = 8/202 (3%)
Query: 7 RNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR-ISTFSKSSIDLLDFE- 64
R+K + + +H R ++F ++ P T +G L +++ S +L
Sbjct: 33 RSKTVARFKAAARHSRRVRFFRWALPVGVTTALGLTLAVNYLDPFSIAVDLPFELGRISL 92
Query: 65 ---PMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMY 121
+ M+ L ++ D YS+ AE A + I L+ + +G +
Sbjct: 93 SGSKVKMEFPKLHGFTSDNRGYSVTAEAAYQDL-TKPDAIDLETIAAKLELAD--HGWVN 149
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVL 181
L A + ++ L + + + A +D+K + S PV T+ D L
Sbjct: 150 LVAATGHYDTKTEKLMLDGGIRFDTSSGYGGHLQNASVDIKGGKLVSKKPVEFTYLDGKL 209
Query: 182 SANFARIENSSRSAVFAGQVSV 203
+A+ + A+ G V +
Sbjct: 210 TADSIEVTQKDSRALLVGNVQL 231
>gi|209883610|ref|YP_002287467.1| hypothetical protein OCAR_4456 [Oligotropha carboxidovorans OM5]
gi|209871806|gb|ACI91602.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 230
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 8/205 (3%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMKK 70
+ +H R +++L+ P V + + +S S + + M
Sbjct: 17 RAARHSRRVRWLRRAVPAIVVVALALIIGASVFNPFRFLNKLPIDLSKLSVSGTKITMDA 76
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
L+ + D+ Y + A+ A + + + + V + + L A + FN
Sbjct: 77 PHLAGFLPDQRPYEVWAKAATQDV-TDPTKVDMLNIRAQVQLED--KSTVRLDAQNGHFN 133
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
L ++ ++ A +D+ + I+S PV + ++ L++ RI
Sbjct: 134 TKTQLLDLTNDILLQTTSGYEARLSQARVDMGSGVISSDQPVAVKLTNGTLNSQNLRITE 193
Query: 191 SSRSAVFAGQVSVVVNPGVLQKKEN 215
SAVF G V++++ P +
Sbjct: 194 HGASAVFGGGVTMMLEPPAEKPATG 218
>gi|218507226|ref|ZP_03505104.1| hypothetical protein RetlB5_06225 [Rhizobium etli Brasil 5]
Length = 88
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
+N A L+++ PF + + L F++A LD+K + S DPV IT + + A
Sbjct: 1 DYNRATDNLHMTAPFTLVLSSGLNAQFQSARLDIKGGNMRSDDPVTITKDNASIVAKTLE 60
Query: 188 IENSSRSAVFAGQVSVVVNPGVLQKKE 214
I + R F G V + V+P + K+
Sbjct: 61 ITDKGRVITFEGNVRMNVDPSTIHKQG 87
>gi|188581678|ref|YP_001925123.1| hypothetical protein Mpop_2426 [Methylobacterium populi BJ001]
gi|179345176|gb|ACB80588.1| protein of unknown function DUF1239 [Methylobacterium populi BJ001]
Length = 253
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 6/191 (3%)
Query: 21 VRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKFILSDY 76
++ L+ PFA V + S ++ + + M+ LS +
Sbjct: 35 SAQVRTLRRVIPFAAGFAVLGLAGIVLWSPFSGSIPNVSIGPISVSGTKVTMESPRLSGF 94
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
K Y +VAE A+ II LQ + V T G YL A F+ +L
Sbjct: 95 RKGERGYEVVAEAAQQDVR-KPSIIELQAMKGHVATDDKG-GRAYLQARGGVFDSTRESL 152
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
+ ++ + A +D K ++ SS V +T + A+ + + R
Sbjct: 153 NLENDIRLWTDKGEEVRLSVAAVDFKTGSLRSSKAVTVTVPSGSIVADSLDVVENGRVIS 212
Query: 197 FAGQVSVVVNP 207
F G+V V +
Sbjct: 213 FVGRVHAVFHG 223
>gi|158425552|ref|YP_001526844.1| hypothetical protein AZC_3928 [Azorhizobium caulinodans ORS 571]
gi|158332441|dbj|BAF89926.1| putative uncharacterized protein [Azorhizobium caulinodans ORS 571]
Length = 240
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 8/204 (3%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR-----ISTFSKSSIDLLDFEPMIMKK 70
K +H ++ +K P V + + +R + L + M+
Sbjct: 28 KATRHSARVRLVKRVLPVLIVVALVLMVSIPLLRNLTMTMELPFDLGRLSLSGTRLTMEA 87
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
LS ++ D Y++ A A + +I L D + G + + + +
Sbjct: 88 PKLSGFTDDNRAYTITAGSAVQDV-TKPDLIGLTDVFAKMELA--NKGWATVKSRTGSLD 144
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+ +S + + A +DVK T+ + PV++T+ D L A+ +I +
Sbjct: 145 TKTQFITLSDGVDLATNSGYAGQMQDAGVDVKAGTVTTDHPVVLTYMDGRLVADKLQITD 204
Query: 191 SSRSAVFAGQVSVVVNPGVLQKKE 214
A F G V + L K E
Sbjct: 205 RGGRAFFDGHVQLDFRLSSLPKSE 228
>gi|254500212|ref|ZP_05112363.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222436283|gb|EEE42962.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 203
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 6/199 (3%)
Query: 12 LQRSKYRQHVRFIQFLKFFFPFATVTI-VGWFLLSSWIRISTFSKSSIDLLDFEPMIMKK 70
+QRS R+H ++ L+F FP + I G + ++ +L + ++M
Sbjct: 5 VQRS-ARRHSTLVRVLRFLFPAIGLLILAGMIGAVVLFNVLGSFGAANLVLTSDGIVMDH 63
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
LS + Y + A +A + II L++ + E + + +N
Sbjct: 64 PKLSG-NDGERSYQVTARKAIQRL-TDPRIIDLEEIRADIVLAPDEGA--RIISLKGIYN 119
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
A TL + + ++ + +D ET +D+K I+S DP+ I + L+A +
Sbjct: 120 NAAETLRLYEGVQLNWSEGYTVDVETVDVDLKTGAISSDDPITIGSGEAQLTAGKIDYDK 179
Query: 191 SSRSAVFAGQVSVVVNPGV 209
+ F V +++ P
Sbjct: 180 DKQIVWFKEGVKLILYPAT 198
>gi|307943001|ref|ZP_07658346.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773797|gb|EFO33013.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 223
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 84/209 (40%), Gaps = 6/209 (2%)
Query: 7 RNKILLQRSKYRQHVRFIQFLKFFFP-FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP 65
R + +QR+ R+H R ++ L+F FP + G L + + ++ +L +
Sbjct: 19 RPETPVQRA-ARRHSRLVKTLRFLFPALGALIFAGMIGLIVLFNLFSSMGAANVILTADG 77
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
++M +LS + + Y++ A RA S I+ L+ + + E + + A
Sbjct: 78 LVMDYPVLSGHDGE-KSYNVTARRAIQRL-SDPRILDLEFIDADIVLGPDEKAN--VTAV 133
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+N A TL + ++ ++ +D+K+ + +S+PV I L
Sbjct: 134 KGIYNNAGETLKLYDGVQVDWSQGYEVEVSEVDIDMKSGALKTSEPVAIDSDKGRLLGGK 193
Query: 186 ARIENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ + F V + + P +E
Sbjct: 194 MDYDQDNGIVRFTDGVKMTIAPSAQASQE 222
>gi|154244025|ref|YP_001414983.1| hypothetical protein Xaut_0067 [Xanthobacter autotrophicus Py2]
gi|154158110|gb|ABS65326.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
Length = 306
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 78/206 (37%), Gaps = 8/206 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR-----ISTFSKSSIDLLDFEPMIMK 69
S R+H + ++++K P + V V S + I + L + M+
Sbjct: 59 SSARRHSKRVRWIKRLLPLSIVVAVVAIGAVSILSRLKLSIELPFEIGHLTLSGSRLTME 118
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
LS ++ D Y + A A + +I L D E + G + A F
Sbjct: 119 LPKLSGFTDDNRGYRVTARTATQDL-THPDLIDLTDIEARLEMTD--KGWAKVAAKVGTF 175
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ + + + + + A +DVK TI + +PV+ T+ D L A+ +
Sbjct: 176 DTKKQFITLGDGVDLAMNGGYGGRLQDAEVDVKAGTIATENPVVFTYLDGRLVADRLHVG 235
Query: 190 NSSRSAVFAGQVSVVVNPGVLQKKEN 215
+ A+F G V + L +++
Sbjct: 236 DRGTRALFEGNVQLDFRMSNLPGQKS 261
>gi|170751836|ref|YP_001758096.1| hypothetical protein Mrad2831_5468 [Methylobacterium radiotolerans
JCM 2831]
gi|170658358|gb|ACB27413.1| protein of unknown function DUF1239 [Methylobacterium radiotolerans
JCM 2831]
Length = 239
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 5/189 (2%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSW--IRISTFSKSSIDL-LDFEPMIMKKFILSDY 76
H ++ ++ P V L + S + L + M+ LS +
Sbjct: 28 HSGRVRAMRRLIPVVAGGAVALLLAYLFNPFAAPLPGVSVGPVTLAGSKVRMENPRLSGF 87
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+ Y + A+ A I LQ + T G L A S F+ A L
Sbjct: 88 RQGTRGYEVTADAALQDVR-KPSQIELQQMRGHIATDDQG-GIARLSATSGLFDTAREAL 145
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
+ ++ +A + K +I+S +PV ++ + A+ + + +
Sbjct: 146 DLKDDIRIWTDKGEEARLRSAAVAFKTGSISSQEPVTVSSPRANVKADTLDVVENGKRIS 205
Query: 197 FAGQVSVVV 205
F G V VV+
Sbjct: 206 FIGNVHVVI 214
>gi|300021931|ref|YP_003754542.1| OstA family protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299523752|gb|ADJ22221.1| OstA family protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 640
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 6/198 (3%)
Query: 14 RSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRI---STFSKSSIDLLDFEPMIMKK 70
R +H R ++ LK P + FL++ + + I + E + MK
Sbjct: 31 RRVASKHTRTVRRLKVVLPLIAAGTIAVFLMTVLNGVGIGPKIADIQIPQIVAENLKMKN 90
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
+ D +Y + AE A+ + ++ L + + +L A F+
Sbjct: 91 PHYEGFQSDGGRYWVKAETAQQDLKTLT-VVHLDGITGDL--LDVKKQKTHLVAKRGTFD 147
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+TL + + L A++ K I S P IT + +N I
Sbjct: 148 NKANTLELYDSINVTGDGGLNATLTHALVRTKEGVITSDQPSTITMGAGQILSNQLTIRQ 207
Query: 191 SSRSAVFAGQVSVVVNPG 208
++ F V + P
Sbjct: 208 KTKEYTFVDNVRTHIKPK 225
>gi|217976352|ref|YP_002360499.1| protein of unknown function DUF1239 [Methylocella silvestris BL2]
gi|217501728|gb|ACK49137.1| protein of unknown function DUF1239 [Methylocella silvestris BL2]
Length = 250
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 72/199 (36%), Gaps = 8/199 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDL----LDFEPMIMKK 70
+H ++FL++ V + +I + +D + ++
Sbjct: 43 KAAGRHSARVRFLRWSIVIFCVVAGAAVAIVGLFDPFRRLPGNITIGQVHVDGTRITVET 102
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
+S + +D Y + A + ++ L + + + + L A ++
Sbjct: 103 PKISGFQRDGRPYEITARTGLQD-TTNPNLVELNGIDARIGMRD--ASTLKLTAEHGSYD 159
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+ +L + +++ + + +TA +D K + S +PV + ++A+ I N
Sbjct: 160 NQHDSLLLDGSAQIRNEVGYAIFMKTAQMDFKTGGLISREPVKVVLKGGHVAADTMNIGN 219
Query: 191 SSRSAVFAGQVSVVVNPGV 209
F G+V ++ G
Sbjct: 220 DG-VISFEGEVRSTIDSGS 237
>gi|154250651|ref|YP_001411475.1| hypothetical protein Plav_0195 [Parvibaculum lavamentivorans DS-1]
gi|154154601|gb|ABS61818.1| protein of unknown function DUF1239 [Parvibaculum lavamentivorans
DS-1]
Length = 239
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 7/194 (3%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKFIL 73
++ F+ +K P + ++G L+ S + + + + + + + M L
Sbjct: 41 SRYSSFVSLMKVGLPVGAIVLLGVVLVYSGV-FDSDDRLEVTFREIDTQPSDLRMVSPRL 99
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ D Y + A+ A + + L + + + E + L A S R++
Sbjct: 100 DGVTSDGKPYVITADNATQD-PASPNFVTLDNIQADIKFNEEE-DWLSLTATSGRYDSEA 157
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
TL +S+ + + E A +D + S V L A+ R N+++
Sbjct: 158 QTLNLSRQIDIFTTWGYEVHGEEATVDFDQGMLTSEKEVTGQGPLGTLRADRMRAHNATQ 217
Query: 194 SAVFAGQVSVVVNP 207
F G V +++ P
Sbjct: 218 VLRFDGNVKMLILP 231
>gi|328545552|ref|YP_004305661.1| hypothetical protein SL003B_3936 [polymorphum gilvum SL003B-26A1]
gi|326415293|gb|ADZ72356.1| hypothetical protein SL003B_3936 [Polymorphum gilvum SL003B-26A1]
Length = 223
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 11/196 (5%)
Query: 21 VRFIQFLKFFFPFATVTI----VGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDY 76
++ L+ FP V I G L + + +L E ++M + LS +
Sbjct: 33 SGLVRLLRILFPLLGVAILVAIAGLIFLYNVLNSLGIGNV---ILTSEGLVMDRPELSGH 89
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+ Y + A RA + II L+ + + + A +N TL
Sbjct: 90 DGE-RSYKVSAVRAIQRI-TDPRIIDLETITAEIVLGPDQRA--AITATKGTYNNGAETL 145
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
+S+ ++ ++ FE+ +D++ T+ +SDP+ I + A +
Sbjct: 146 SLSEGIELDWSGTYQVHFESVDVDLRTGTVRTSDPLQINSQQGDIQAGRFAYDQDKGLVR 205
Query: 197 FAGQVSVVVNPGVLQK 212
F + +V+ PG +K
Sbjct: 206 FTDGIKMVLRPGAQEK 221
>gi|323136908|ref|ZP_08071988.1| protein of unknown function DUF1239 [Methylocystis sp. ATCC 49242]
gi|322397669|gb|EFY00191.1| protein of unknown function DUF1239 [Methylocystis sp. ATCC 49242]
Length = 236
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 70/194 (36%), Gaps = 7/194 (3%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKF 71
+ +H + L+ + + +V L I +F ++L ++++
Sbjct: 31 EALRHTARVTRLRRWMLWGAGGVVALVGLGLLIGSLSFLPVDLNLARVALKGTRIVIETP 90
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
L Y KD Y + A + I L+ + V + ++ + L A ++
Sbjct: 91 KLVGYRKDGRPYEVRARVGVQDI-AKPDIFELEGLD--VRVENTQDNSIVLTAEKGVYST 147
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
+ +S ++ N + ++A +D K+ + S PV + + A
Sbjct: 148 KSDYADLSGGVTIRDDKNFDMRLDSASMDFKSSVMKSDKPVTLRIDGGEVVAKSVEFVQK 207
Query: 192 SRSAVFAGQVSVVV 205
R A F G V V+
Sbjct: 208 ERRATFVGDVHSVL 221
>gi|118589456|ref|ZP_01546862.1| hypothetical protein SIAM614_07923 [Stappia aggregata IAM 12614]
gi|118438156|gb|EAV44791.1| hypothetical protein SIAM614_07923 [Stappia aggregata IAM 12614]
Length = 187
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 73/187 (39%), Gaps = 5/187 (2%)
Query: 24 IQFLKFFFP-FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVK 82
++ +++ FP + + L + + ++ +L E ++M LS + D
Sbjct: 2 VRIMRWLFPGVGLLILAVMVGLVVLFNVLSGLGATNVMLTSEGLVMDHPELSGHDGD-RS 60
Query: 83 YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF 142
Y + A RA S II L+ + + + + A +N A +L + +
Sbjct: 61 YRVTAYRAIQRL-SDPRIIDLETIRADITLSKDQSAQ--IVALKGTYNNATESLRLYEGI 117
Query: 143 KMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVS 202
+++ + +D +D+ N + +S+ V I + A + + F+ +
Sbjct: 118 QLEWSEGYTVDLSEVEIDLTNGALKTSNVVSIRSDQGRVVAGKLDYDKAKGIVRFSDGIK 177
Query: 203 VVVNPGV 209
+ +NP
Sbjct: 178 MTLNPAS 184
>gi|312114053|ref|YP_004011649.1| hypothetical protein Rvan_1288 [Rhodomicrobium vannielii ATCC
17100]
gi|311219182|gb|ADP70550.1| protein of unknown function DUF1239 [Rhodomicrobium vannielii ATCC
17100]
Length = 271
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 75/195 (38%), Gaps = 8/195 (4%)
Query: 17 YRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS-----TFSKSSIDLLDFEPMIMKKF 71
R+H R ++ L+ P + I+ + L S++R+S + L+ + M +
Sbjct: 32 ARRHSRLVRVLRIVLPLMAMGILSLYALPSFLRVSVDKGRGTATVRAIELEKGALKMIEP 91
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+ ++ Y A+ A + + ++L + + Q + L A N
Sbjct: 92 HVRGVNEKNESYDFTADSATQA-SVKADEMYLLNVRGRMTGQDGKL--TTLAAPDGTHNS 148
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
+ + ++ + L +F+TA +K S+ PV++ + + A+ +
Sbjct: 149 KAEQISFNNGVTIRREPGLAAEFQTATAYMKEQKAVSNTPVVVRLHESTIHADGMTLYWG 208
Query: 192 SRSAVFAGQVSVVVN 206
A+F G V +
Sbjct: 209 ESRAIFEGNVRTHIE 223
>gi|182677566|ref|YP_001831712.1| hypothetical protein Bind_0571 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633449|gb|ACB94223.1| protein of unknown function DUF1239 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 241
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 74/191 (38%), Gaps = 7/191 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS--TFSKSSIDLLDFE--PMIMKK 70
+ +H +++L+ F V I + + SI +D E + ++
Sbjct: 35 AAANRHTSRVRWLRRAFIIVPVVIGLGIFVMTVFDPFRHFPGNISIGRVDIEGSKITVET 94
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
++ + +++ A +A + I+ L D + + + ++ A + ++
Sbjct: 95 PNITGLQTNGQPFAIRAAKAVQNI-VQPNIVTLTDVNSDLGMED--KSNAHITAETGVYD 151
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+ ++ ++K + + + + +K ++ D V + D ++ A+ +E+
Sbjct: 152 SKIDRVQLTGKVRIKNIGRYDMRMQRSEIYMKPGILDGWDKVEVLIEDGIIKADSMHLED 211
Query: 191 SSRSAVFAGQV 201
+ FAG V
Sbjct: 212 NGHHITFAGNV 222
>gi|83944936|ref|ZP_00957302.1| hypothetical protein OA2633_09914 [Oceanicaulis alexandrii
HTCC2633]
gi|83851718|gb|EAP89573.1| hypothetical protein OA2633_09914 [Oceanicaulis alexandrii
HTCC2633]
Length = 241
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 6/200 (3%)
Query: 6 RRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR--ISTFSKS-SIDLLD 62
RR K L + R RF+ L+ A + L+ + S S ++
Sbjct: 16 RRAKSL---ATARARSRFVAGLRLVLLAAGAVVALNALVQIVLSGGRSAPSPEVALSATA 72
Query: 63 FEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYL 122
E + + + Y + AE A+ + + +I L+ L +
Sbjct: 73 GESERIINPRFTGRDEGGTPYVITAETAERRSGAEQALIDLEGPTLDYALLDDGADASRV 132
Query: 123 FAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLS 182
A F+ +N +L++ ++ + D ++A L ++ + PV +
Sbjct: 133 LARHGVFDESNLSLHLETDVRLTTRSGYVFDTQSATLFLREGVVTGPQPVHGLAPWGAVR 192
Query: 183 ANFARIENSSRSAVFAGQVS 202
A+ + + + G V
Sbjct: 193 ADRFEVREDGQHIILQGDVR 212
>gi|296446797|ref|ZP_06888735.1| protein of unknown function DUF1239 [Methylosinus trichosporium
OB3b]
gi|296255672|gb|EFH02761.1| protein of unknown function DUF1239 [Methylosinus trichosporium
OB3b]
Length = 249
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 15/211 (7%)
Query: 4 LDRRNKILLQRS----KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSID 59
LDR + ++ R + R+H + + L+ F + + IV LL + +R +F ++
Sbjct: 11 LDRLDGLIAARPDAIPEARRHTQRVARLRRFLIWGSAGIVVAALLGALVRSLSFLPVNLS 70
Query: 60 LLDFE----PMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRS 115
+ ++ L Y KD Y L A A + I L EL V
Sbjct: 71 FSRIVTQGTRITIESPKLVAYRKDGRPYELRARTAVQDLD-HPDIYELN--ELEVRITND 127
Query: 116 EYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAV--LDVKNITINSSDPVI 173
G + L + ++ +S + D R D +TA +D + + S+ P
Sbjct: 128 SDGVIILTSQRGVYDGGKDEAALSGDAHIY--DGTRFDMKTAAATIDFRGGLVTSTTPTT 185
Query: 174 ITHSDFVLSANFARIENSSRSAVFAGQVSVV 204
+ + V++A + + A F G V
Sbjct: 186 LMLDESVVTAQACEFSQTEKRATFTGAVHTT 216
>gi|239787678|emb|CAX84186.1| conserved uncharacterized protein [uncultured bacterium]
Length = 227
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 7/195 (3%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWI----RISTFSKSSIDLLDFEPMIMKKFILS 74
++ RF+ +K P ++G L+ I S S+I+ D + + M
Sbjct: 31 RYTRFVGMMKVLLPAVAALVLGLVLIWPQIVGRDERFRVSFSNINAKDVDTLSMVNARYF 90
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ +S+ A+ A + K + L+ + + T ++ + L A + ++ +
Sbjct: 91 GTDTNNQPFSVTADMANEASRGAK-AVELESPKADIMTHDGQW--LALSADNGLYSQPSS 147
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
TL + + + +A D+K + DPV L+A R+ +
Sbjct: 148 TLDLLGNVNLFHDKGYEIHTTSAQADLKMGAASGDDPVRGQGPFGALTAEGFRLYDKGSR 207
Query: 195 AVFAGQVSVVVNPGV 209
VF G+ +V++P
Sbjct: 208 IVFTGKSHLVLDPKA 222
>gi|114799884|ref|YP_758936.1| hypothetical protein HNE_0203 [Hyphomonas neptunium ATCC 15444]
gi|114740058|gb|ABI78183.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 225
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 10/210 (4%)
Query: 6 RRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP 65
RR L Q R+ +++L++ A +G FL + D +
Sbjct: 16 RRQLTLAQ---ARRRSERVKYLRYALVGAAAVSIGLFLGYIVRSAIGQESRPPPVDDSQA 72
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+ M + +++ A+ AK + G + L P R G + A
Sbjct: 73 VTMVNPRFTGRDAAGQIFTITADTAKR-RRTRDGAVDLTG-----PILRDSKGTE-VQAP 125
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
S ++ L + + ++ + + A + V + P+ + A+
Sbjct: 126 SGFYDRDLGILELYEDVRISDAAGYMFNSQGARVHVAEDRVEGLSPLEGQGPLGDIKADS 185
Query: 186 ARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
I + VF G V V+ P +
Sbjct: 186 YEILDGGDRIVFKGNVQTVIYPSNSGQPAG 215
>gi|114568662|ref|YP_755342.1| hypothetical protein Mmar10_0108 [Maricaulis maris MCS10]
gi|114339124|gb|ABI64404.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 237
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 69/191 (36%), Gaps = 1/191 (0%)
Query: 12 LQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKF 71
L S R+ F++ ++ FF A + I G + + + + + E + M
Sbjct: 27 LALSVARKRTAFVRGMRLFFTAAALAITGLLVAQLVLGSGGPTTGETEAVS-EDVRMTNP 85
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+ ++ Y + A+ A ++ G+ L+ L + + A S R++L
Sbjct: 86 RFTGRDENLTPYVVTADTAIRRRDAADGVTELEHPRLDYNFLETGTDVSRVLAESGRYDL 145
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
N L + + + A + ++ + + V T + A+ I +
Sbjct: 146 PNRILDLHSDVNFRTRAGYTFQSNHARIFLREERVTGEESVEGTGPMGTIRADSYEITDG 205
Query: 192 SRSAVFAGQVS 202
VF+G V
Sbjct: 206 GNRIVFSGNVR 216
>gi|315497169|ref|YP_004085973.1| hypothetical protein Astex_0121 [Asticcacaulis excentricus CB 48]
gi|315415181|gb|ADU11822.1| protein of unknown function DUF1239 [Asticcacaulis excentricus CB
48]
Length = 218
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 75/200 (37%), Gaps = 6/200 (3%)
Query: 2 DHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKS-SIDL 60
D D R ++ Q +++ R I L+ FP + I ++ WI + + S ++
Sbjct: 10 DLADARQRLTTQALAWKKRSRKISRLRIIFP--GLIIGLIVVMIVWIIVQSVINSMNVYS 67
Query: 61 LDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDM 120
E + M +D S++ +Y + R + G+ + + +
Sbjct: 68 ATGEDIRMTNPFYTDRSRNGERYEM---RGLEAVRKGRNASVVSLTAPRLEIRSENSRPS 124
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
L + ++ +++ + + L L A +D++N I PV
Sbjct: 125 ALEGAAGIYDDTKRRFTVNKDVTLSSGNGLSLRTHAAEVDLQNAVITGDKPVEGRWQTGT 184
Query: 181 LSANFARIENSSRSAVFAGQ 200
++A R+E + R F G+
Sbjct: 185 VNAQAFRVEQNGRKVAFYGK 204
>gi|167645655|ref|YP_001683318.1| hypothetical protein Caul_1691 [Caulobacter sp. K31]
gi|167348085|gb|ABZ70820.1| protein of unknown function DUF1239 [Caulobacter sp. K31]
Length = 206
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 72/197 (36%), Gaps = 6/197 (3%)
Query: 12 LQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKF 71
+++ +H + ++ L+ P + + + IR + + P+ M+
Sbjct: 13 VRKKNRNRHRKPVRALRVLLPTLAIGVAAAIIGQGVIRAMAAKDAP--PVANAPLRMENP 70
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+ KD + + A A + +FL++ +LT + ++ + +
Sbjct: 71 RFTGTLKDGRAFLITASSATRDL-ANADQVFLKNPQLTRGYGSDK--PTHVVSKDGVYQE 127
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVI-ITHSDFVLSANFARIEN 190
+L ++ K+ + + A++D + + V ++ + A+ + +
Sbjct: 128 EKGSLLLTGDVKIDNGQGYQFASQKALIDTRTGDLVGGAAVQGAGPNNGAIRADSYSVSD 187
Query: 191 SSRSAVFAGQVSVVVNP 207
VF G+V + P
Sbjct: 188 KGDRVVFKGRVRTRLTP 204
>gi|46201482|ref|ZP_00054960.2| hypothetical protein Magn03009616 [Magnetospirillum magnetotacticum
MS-1]
Length = 238
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 69/204 (33%), Gaps = 7/204 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATV----TIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKK 70
+ H F+ +K P V +V W LS S +++ + ++MK
Sbjct: 28 GPFADHSHFVSVMKIALPALAVFLLGLVVIWPKLSQLESGFKLSFANLSPKSVDTLVMKN 87
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
+ +++ ++ A + +I+L + + + ++ + A + ++
Sbjct: 88 ARYFGVDESNRPFAVTSDTATQ-LPDNQDLIYLVNPKADFTSNSG--ANIVVDAVAGIYH 144
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+ L +S + + TA++++ + +PV + + I
Sbjct: 145 QSTKVLDLSGGVNLYHDSGYEIHTPTAIVELATNSARGFEPVEGHGPQGAIRSIGFEITG 204
Query: 191 SSRSAVFAGQVSVVVNPGVLQKKE 214
F G+ + + +
Sbjct: 205 KRHDITFTGKSQLNLRAVSKKAPG 228
>gi|197103638|ref|YP_002129015.1| hypothetical protein PHZ_c0172 [Phenylobacterium zucineum HLK1]
gi|196477058|gb|ACG76586.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 214
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 13/203 (6%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSD 75
++R+ + I+ L+ P I S + D EP+ +
Sbjct: 20 RWRRRSKLIRLLRVLLPALIALIFLGLAGSVVWSTFSSQPQRAASGD-EPIRLINPRFVG 78
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPT---QRSEYGDMYLFAHSARFNLA 132
+ L A+ A N Q L P +M L F+ A
Sbjct: 79 RDDKGRAFVLTADSAIRDRN------DYQRVLLKAPALVLDEGGPDEMRLAGAEGVFHEA 132
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVL-DVKNITINSSDPVIITHSDFVLSANFARIENS 191
L +S K+ D A + D K + S P+ ++A +
Sbjct: 133 TGKLSLSGGVKLA--DAKSAFDTAASMFDTKTGELVGSGPIQGAGDLGEITAESYGVYGK 190
Query: 192 SRSAVFAGQVSVVVNPGVLQKKE 214
VF G V + P Q K+
Sbjct: 191 GDRMVFKGGVRARLQPNQEQPKQ 213
>gi|296535083|ref|ZP_06897336.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296264591|gb|EFH10963.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 201
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 4/151 (2%)
Query: 58 IDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEY 117
+ E + + + Y++ A A I L +
Sbjct: 54 VAQTSAEALRLSAARYQGVDEQNRPYTVTAATALQQTQDAP--IELDQPRADMVMGNG-- 109
Query: 118 GDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHS 177
+ L A + L ++ + D L E A +D+ PV
Sbjct: 110 AWVLLEARQGEYRRDASKLDLNGDVTLWHDDGSMLRTEMARIDIAAGGATGDRPVAAQGP 169
Query: 178 DFVLSANFARIENSSRSAVFAGQVSVVVNPG 208
L + R+EN + VF GQ ++
Sbjct: 170 FGTLVSQGFRLENRGQVVVFTGQARALLEGS 200
>gi|16125420|ref|NP_419984.1| hypothetical protein CC_1168 [Caulobacter crescentus CB15]
gi|221234163|ref|YP_002516599.1| hypothetical protein CCNA_01226 [Caulobacter crescentus NA1000]
gi|13422488|gb|AAK23152.1| hypothetical protein CC_1168 [Caulobacter crescentus CB15]
gi|220963335|gb|ACL94691.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 210
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 11/178 (6%)
Query: 33 FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKT 92
FA + ++W R SK P+++ K + KD + + AERA+
Sbjct: 39 FAAGVAATVIVQAAW-RSLASSKLQTQAAT-APLVLDKPRFTGVLKDGRPFLITAERAER 96
Query: 93 SFNSGKGIIFLQDFELTVPTQRSEYGD---MYLFAHSARFNLANHTLYISQPFKMKVKDN 149
+ I+ L T P YG+ A S + A +TL ++ K+ +
Sbjct: 97 DAK-DQNIVRL-----TAPLLVRGYGEPNPSQATAKSGVYREAENTLLLTDEVKITSAEG 150
Query: 150 LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNP 207
D A++D++ ++ + + A+ + + V G V + P
Sbjct: 151 FDFDAPRALIDLRTGAVSGDAGIAGSGPKGSTRASAYEVTDKGDRVVLKGGVRTRLEP 208
>gi|295690084|ref|YP_003593777.1| hypothetical protein Cseg_2710 [Caulobacter segnis ATCC 21756]
gi|295431987|gb|ADG11159.1| protein of unknown function DUF1239 [Caulobacter segnis ATCC 21756]
Length = 212
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 66/179 (36%), Gaps = 4/179 (2%)
Query: 29 FFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAE 88
+ I G + + R SK P+++ K + KD + + A+
Sbjct: 36 LGLAVFAIIIGGAVVGQASWRSLASSKLQTQ-ASTTPLLLDKPRFTGVLKDGRPFLITAD 94
Query: 89 RAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKD 148
RA+ + + ++ L L + + A S + A TL ++Q K+ +
Sbjct: 95 RAERD-SEDEDLVRLSAPTLVRGYGQPDASQA--TAKSGVYREAARTLLLTQDVKITNGE 151
Query: 149 NLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNP 207
D A++D++ ++ V + + AN +++ + G+V + P
Sbjct: 152 GYEFDAPRALIDMRTGEVSGDAGVAGSGPNASTRANAYSVKDKGDRVILNGRVRTRLEP 210
>gi|296282122|ref|ZP_06860120.1| hypothetical protein CbatJ_00810 [Citromicrobium bathyomarinum
JL354]
Length = 222
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 7/198 (3%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKS--SIDLLDF-EPMIMKKFILSDY 76
H R I+ L P AT IV + +++ + S + + E + +
Sbjct: 29 HDRLIKILAVALPMATGVIVAFLVIAPFSPRDEVSFVLDRDKVQEIDERLRIDNATYRGS 88
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+SL A A +S +GI+ L + Q L A + +++ L
Sbjct: 89 DNQGRPFSLTAREAVQ-RSSKEGIVRLDTVIARILLQGG---PAQLRAEGGAYKISDEVL 144
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAV 196
++ P + D L +D+++ T+ + V SA+ R++ +R+
Sbjct: 145 DVTGPIILNATDGYNLVARGVSVDLRDQTLVGDEGVSGAVPAGTFSADTLRVDLETRTIT 204
Query: 197 FAGQVSVVVNPGVLQKKE 214
G + + PG L+ +
Sbjct: 205 LDGNARLRMVPGRLETMQ 222
>gi|332187935|ref|ZP_08389668.1| hypothetical protein SUS17_3006 [Sphingomonas sp. S17]
gi|332012096|gb|EGI54168.1| hypothetical protein SUS17_3006 [Sphingomonas sp. S17]
Length = 212
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 66/201 (32%), Gaps = 9/201 (4%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKS----SIDLLDFEPMIMKK 70
+ +H RF+ ++ P A + + +++ S S +++ E M ++
Sbjct: 17 APGSRHDRFVTLARWMLPSAIGVLTAFLVMAPIYSSSEVSFVLDKKKVEVAQ-ERMKIQA 75
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
+SL A A ++ ++ L + + A+S R++
Sbjct: 76 AQYRGVDDKGQPFSLDAGSAIQRSSAEP-VVQLNKLAAEIRLSDG---PATVSANSGRYD 131
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+ + + P + L A +D++ + S V A+ R
Sbjct: 132 MRTEQVKLDGPLDFQSAGGYNLKTHDATIDLQQRMLVSGGAVTGQVPQGTFRADKLRANL 191
Query: 191 SSRSAVFAGQVSVVVNPGVLQ 211
R+ G + + P +
Sbjct: 192 EDRTVTLDGNARLRIVPQSTK 212
>gi|94495608|ref|ZP_01302188.1| hypothetical protein SKA58_06150 [Sphingomonas sp. SKA58]
gi|94424996|gb|EAT10017.1| hypothetical protein SKA58_06150 [Sphingomonas sp. SKA58]
Length = 215
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 9/199 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIR----ISTFSKSSIDLLDFEPMIMKKFILSD 75
H R ++ LK + P + + + + K+ +++ E M + + +
Sbjct: 22 HDRLVKLLKNWLPVSVGILAALLATAPFTSGDKVSFVLDKNKVEVAK-ERMRVSEALYRG 80
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+SL A A + I+ L D + L A R+++ +
Sbjct: 81 EDSKGQPFSLRAGSAVQKSSREP-IVDLNDMSARILLSDG---PAVLTAQKGRYDMESER 136
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
+ I P + + RL +D+ + S+ V SA+ + +R+
Sbjct: 137 VAIEGPVQFQAAGGYRLTTRDVGVDLTTRRMRSAGRVDGRIPIGTFSADHLEADMGARTV 196
Query: 196 VFAGQVSVVVNPGVLQKKE 214
G+ + + L+ ++
Sbjct: 197 TLDGRARLRIEQNGLKGQK 215
>gi|329847151|ref|ZP_08262179.1| hypothetical protein ABI_02140 [Asticcacaulis biprosthecum C19]
gi|328842214|gb|EGF91783.1| hypothetical protein ABI_02140 [Asticcacaulis biprosthecum C19]
Length = 223
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 9/199 (4%)
Query: 5 DRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKS-SIDLLDF 63
+R ++ Q + R+ R I L+ F P A I L WI +++ S ++ +
Sbjct: 21 ERSQRLGKQVAAVRRRSRLIHSLRTFLPGA--IIGLIVLNFGWIIVTSIINSMNVYDGNS 78
Query: 64 EPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLF 123
+ M + Y++ A GK + + + G +
Sbjct: 79 NEIRMTNPRYHGQTGKGEHYTISGLEA---VRRGKDATTVMLKSPVMEFKGDADGTTRVA 135
Query: 124 AHSARFNLANHTLYISQPFKMKVKDNLRLDFET--AVLDVKNITINSSDPVIITHSDFVL 181
A + F+ + ++ + F+T A++D+ N T+ V T S +
Sbjct: 136 AVNGVFDQQSRKFIMTGNVLLVT-GGSDFTFKTEEAIVDLDNSTVYGDKHVEGTSSVGHI 194
Query: 182 SANFARIENSSRSAVFAGQ 200
I ++ S F G+
Sbjct: 195 VGESFVISDNGNSVRFTGR 213
>gi|148260668|ref|YP_001234795.1| hypothetical protein Acry_1671 [Acidiphilium cryptum JF-5]
gi|326403862|ref|YP_004283944.1| hypothetical protein ACMV_17150 [Acidiphilium multivorum AIU301]
gi|146402349|gb|ABQ30876.1| protein of unknown function DUF1239 [Acidiphilium cryptum JF-5]
gi|325050724|dbj|BAJ81062.1| hypothetical protein ACMV_17150 [Acidiphilium multivorum AIU301]
Length = 246
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 64/202 (31%), Gaps = 15/202 (7%)
Query: 13 QRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLS-------SWIRISTFSKSSIDLLDFEP 65
QR+ + R + K P ++ ++ S+ R++
Sbjct: 37 QRAALGRQRRIVGIAKIVLPAIAAVLLFAIVIFPDLRSGASFGRVTYRELPQASGAALSR 96
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
M K+++ A A +G + L + + T+ L A
Sbjct: 97 --MSTAEYRGVDARGEKFTITARHAVQ---TGGDRLSLTGPKGDITTKGG--AWFMLDAR 149
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLS-AN 184
+ ++ L ++ + D + A +D++ T + DPV L+ A
Sbjct: 150 NGVYHQKTQRLDLAGKVTLYRADGTTMRTRQATIDIQAGTADGHDPVSAFGPFGTLTSAQ 209
Query: 185 FARIENSSRSAVFAGQVSVVVN 206
N + F G +V++
Sbjct: 210 GFTARNRGQIITFTGPSHLVLD 231
>gi|85375260|ref|YP_459322.1| hypothetical protein ELI_12165 [Erythrobacter litoralis HTCC2594]
gi|84788343|gb|ABC64525.1| hypothetical protein ELI_12165 [Erythrobacter litoralis HTCC2594]
Length = 221
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 71/198 (35%), Gaps = 9/198 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRI----STFSKSSIDLLDFEPMIMKKFILSD 75
H R ++FL P A + +++ + ++ ++ E + + +
Sbjct: 29 HDRLVKFLGAALPMAVGIVAALMVITPLSPRGEVSFLLDRDTVAVIR-ERLRVDNALYRG 87
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ +SL A+ A +S +GI+ L+D + L A ++L N
Sbjct: 88 ADNEGRPFSLTADEAVQQ-SSEEGIVRLRDVVARILLPDG---PGQLVAEGGAYSLENEV 143
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
L + ++ D R+ +D+ + S V + S + ++ S R
Sbjct: 144 LDVDGALRVTAADGYRIVATGVAIDLAAKKLLGSGGVEGSFPAGTFSGDQLEVDLSERII 203
Query: 196 VFAGQVSVVVNPGVLQKK 213
G + + PG L+
Sbjct: 204 ALEGNAKLRMVPGELRMP 221
>gi|163794942|ref|ZP_02188911.1| hypothetical protein BAL199_08703 [alpha proteobacterium BAL199]
gi|159179761|gb|EDP64288.1| hypothetical protein BAL199_08703 [alpha proteobacterium BAL199]
Length = 224
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 7/191 (3%)
Query: 19 QHVRFIQFLKFFFPFATV-TIVGWFLLSSWIR---ISTFSKSSIDLLDFEPMIMKKFILS 74
+ R + +K P + + + ++ I+ D + + +
Sbjct: 30 RASRLVAAMKMLLPAIALCLVALVVIWPQLLQEAQKYPMRGKPINASDADTLRVANPRFI 89
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ Y ++A A+ S + L+ + + T + + L A ++ +
Sbjct: 90 GVDEKDRPYEIIATSARQESESA-DAVHLERPQADMITDKG--DWVTLTAGQGVWHKRDE 146
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
+ ++ + + +L +TA + + T S D + R+ +
Sbjct: 147 VVDLAGGVSVFHEAGHQLVSDTARISLGAGTAESDDATSGQSPGGNVQGEGFRLFDRGAR 206
Query: 195 AVFAGQVSVVV 205
VF G+ V+
Sbjct: 207 IVFTGRAKAVL 217
>gi|294013113|ref|YP_003546573.1| hypothetical protein SJA_C1-31270 [Sphingobium japonicum UT26S]
gi|292676443|dbj|BAI97961.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 215
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 9/198 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWI----RISTFSKSSIDLLDFEPMIMKKFILSD 75
H R + LK + P + + + + K+ +++ E M + + +
Sbjct: 22 HDRLVGLLKNWLPVSVGVLAALLATAPFTGGDKVSFVLDKNKVEVAK-ERMRVTEALYRG 80
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+SL A A + I+ L D + L A R+++
Sbjct: 81 EDSKGQPFSLRAGSAVQKSSREP-IVDLNDMSARILLSDG---QALLRAQKGRYDMDTER 136
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
+ I P + + + RL +D+K + S+ V S + + S+R+
Sbjct: 137 VAIDGPVQFQSEGGYRLTTRDVGVDLKTRRMQSAGRVDGRIPIGTFSGDHLEADLSARTV 196
Query: 196 VFAGQVSVVVNPGVLQKK 213
G+ S+ + L+ +
Sbjct: 197 TLNGRASLRIEQNGLKGQ 214
>gi|307293723|ref|ZP_07573567.1| protein of unknown function DUF1239 [Sphingobium chlorophenolicum
L-1]
gi|306879874|gb|EFN11091.1| protein of unknown function DUF1239 [Sphingobium chlorophenolicum
L-1]
Length = 215
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 68/198 (34%), Gaps = 9/198 (4%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWI----RISTFSKSSIDLLDFEPMIMKKFIL 73
+H R + LK + P + + + + K+ +++ E M + + +
Sbjct: 20 GRHDRLVGLLKNWLPVSVGVLAALLATAPFTGGDKVSFVLDKNKVEVAK-ERMRVTEALY 78
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+SL A A + I+ L D + L A R+++
Sbjct: 79 RGEDSKGQPFSLRAGSAVQKSSREP-IVDLNDMSARILLSDG---QALLRAQKGRYDMDT 134
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+ I P + + + R+ +D+K+ + S+ V S + + R
Sbjct: 135 ERVAIDGPVQFQSEGGYRMTTRDVGVDLKSRRMQSAGRVDGRIPIGTFSGDRLEADLVER 194
Query: 194 SAVFAGQVSVVVNPGVLQ 211
+ G+ ++ + L+
Sbjct: 195 TVTLNGRATLRIEQNGLK 212
>gi|148555812|ref|YP_001263394.1| hypothetical protein Swit_2904 [Sphingomonas wittichii RW1]
gi|148501002|gb|ABQ69256.1| protein of unknown function DUF1239 [Sphingomonas wittichii RW1]
Length = 231
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 11/212 (5%)
Query: 1 MDHL-DR-RNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWI----RISTFS 54
M L DR R++ L + H R I L+ P A +V L+ S
Sbjct: 1 MSELADRARSQRQLWAASGSSHDRVIAILRIVLPVAIGVLVVLLALAPLTVGRDISFVLS 60
Query: 55 KSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQR 114
K +++ E M + + L A A + + ++ LQ +
Sbjct: 61 KDRVEVAR-ERMRVTAATYRGQDSKGQPFQLTAGSAVQATSRDP-VVRLQKLAAEIQLPE 118
Query: 115 SEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVII 174
+ A R+++ + + + P ++ D ++ +D+K + S PV
Sbjct: 119 G---PAKIVAGHGRYDMDSEKVAVDGPVHLRSADGYNIETRDVGIDLKTRQVASQGPVDG 175
Query: 175 THSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
+ S + + + R V G+ + ++
Sbjct: 176 RMNIGTFSGDRFTADLNKRIVVLEGRARLHID 207
>gi|87201262|ref|YP_498519.1| hypothetical protein Saro_3250 [Novosphingobium aromaticivorans DSM
12444]
gi|87136943|gb|ABD27685.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
12444]
Length = 214
Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 63/201 (31%), Gaps = 15/201 (7%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILS----- 74
H R + FL P A VG L I + LLD + + + +
Sbjct: 22 HDRLVHFLARALPAA----VGALLAIMIIAPLSPRGEISFLLDRRKVAVLEDRMQVSSAM 77
Query: 75 --DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
+S+ A A + + +I L + L A ++
Sbjct: 78 YRGQDDQGRNFSITAGSAVQRTKATQ-MIQLDQLTARIMLDDG---PALLTAAKGNYDFG 133
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
+ I P + D R+ +D+ + S PV SA+ + S+
Sbjct: 134 REIVDIVGPINFQTSDGYRMTATNVDIDLGGKRLKSRGPVEGRIPAGTFSADRISADLSA 193
Query: 193 RSAVFAGQVSVVVNPGVLQKK 213
RS G + + PG +Q
Sbjct: 194 RSVTLEGNARLRMVPGRMQMP 214
>gi|209966459|ref|YP_002299374.1| hypothetical protein RC1_3200 [Rhodospirillum centenum SW]
gi|209959925|gb|ACJ00562.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 208
Score = 74.7 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 3/163 (1%)
Query: 47 WIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDF 106
W S S D + M + K + + AE+ G G + L +
Sbjct: 45 WPLFSGRQDSQRAGPDTGQLEMVEARYLGTDKGARPFEVRAEKVVQ-VGGGSGRVDLVNP 103
Query: 107 ELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITI 166
+ + + + + A ++ + L + + E A +D +
Sbjct: 104 QAEITLKGG--DWLTMSARRGNYDQKSGQLVLEGDVTLFQDGGYEFTTEMAQVDTQKGIA 161
Query: 167 NSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPGV 209
+ PV + A RI + + VF G+ +++ G
Sbjct: 162 WGNAPVRGQGPVGDIQAGGFRILDDGNTIVFTGRARLLLADGT 204
>gi|254438164|ref|ZP_05051658.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198253610|gb|EDY77924.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 196
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 19/197 (9%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFIL-----S 74
+ F+ FLK P + ++ + ++I + E + ++ L S
Sbjct: 8 YSNFVGFLKITLPLGALALMSTVF---LFARTPTQDNAIPYAEIEEIA-REPRLSGARVS 63
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ D L A+ A ++ ++ ++ + + A N A
Sbjct: 64 GVTDDGSVIELTAQTA----RPIGDVLLVETISASIDAVDGI--HINIRAGQGEINNATR 117
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE----N 190
++ +++ + ++ ++ I S + + L+A IE
Sbjct: 118 IARLTGLARVETSNGYEMETAGITANLTTGQIISDGALEVQAPFGSLTAGQMTIETPEGG 177
Query: 191 SSRSAVFAGQVSVVVNP 207
+ + +F V +V P
Sbjct: 178 TGQVMLFQNGVRLVYTP 194
>gi|254454863|ref|ZP_05068300.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198269269|gb|EDY93539.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 196
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 19/197 (9%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFIL-----S 74
+ +F+ FLK P A + ++ + S++ + E + ++ L S
Sbjct: 8 YSKFVGFLKITLPLAALALMSTVF---LFARAPTQDSAVPYAEIEE-VAREPRLSGAQVS 63
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ D L AE A + ++ ++ + D+ A N A
Sbjct: 64 GVADDGSVIQLTAETA----RPLGDFLLVETMFASIDVVNGTHIDIR--AGRGEINNATR 117
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN---- 190
++ +++ + ++ ++ I S + I L+A IE
Sbjct: 118 IARLTGLARIETSNGYEMETAGITANLTTGQITSDGALEIQAPFGSLTAGQMIIETPEGM 177
Query: 191 SSRSAVFAGQVSVVVNP 207
+ +F V +V P
Sbjct: 178 GGQVMLFQNGVRLVYTP 194
>gi|103487823|ref|YP_617384.1| hypothetical protein Sala_2342 [Sphingopyxis alaskensis RB2256]
gi|98977900|gb|ABF54051.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 219
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 10/213 (4%)
Query: 3 HLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRI----STFSKSSI 58
LDR + + RS H R ++ L++ P + + S + + +K +
Sbjct: 13 DLDRTMRQMWARSGSS-HDRVVRVLRYGLPLVIGVVAAVLVFSPFTQRAEISFLLAKDKV 71
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
D+ E M + + ++L+A A ++ I+ + D +
Sbjct: 72 DMAS-ERMKVTRAEYRGQDAKGQPFALLAGSAVQKSSAEP-IVRMTDLSGAIRLADGL-- 127
Query: 119 DMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSD 178
+ A S +N+ + + +++ + RLD +D+ + + V +
Sbjct: 128 -ATIVAQSGAYNMETERVVVPGTVRVRSANGYRLDASNVAVDLNTRRLIGTGGVEGALNI 186
Query: 179 FVLSANFARIENSSRSAVFAGQVSVVVNPGVLQ 211
SAN + R G + +N G ++
Sbjct: 187 GQFSANALSADLDKRIVRLEGNARLRINQGAIK 219
>gi|85709986|ref|ZP_01041051.1| hypothetical protein NAP1_13913 [Erythrobacter sp. NAP1]
gi|85688696|gb|EAQ28700.1| hypothetical protein NAP1_13913 [Erythrobacter sp. NAP1]
Length = 221
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 68/202 (33%), Gaps = 7/202 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWI---RISTFSKSSIDLLDFEPMIMKKF 71
+ H R + FL P + +++ +S + + E + +
Sbjct: 24 APGGNHDRLVAFLARALPMGVGVLAALMIITPLSPRGEVSFLLDRNAVSVIDERLSVDNA 83
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+ +S+ A A +S +G + + D + Q L A +++
Sbjct: 84 MYRGRDNQGRPFSITAGEAVQ-RSSAEGKVRMDDLMAQLLLQDG---PARLMAPGGVYDI 139
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
+ + +++ D + D++ T++ V SA+ + +
Sbjct: 140 NEEVVSVDGELRVRTADGYSMTASGVAFDLETRTMSGEGGVEGAVPAGTFSADTMQGDLD 199
Query: 192 SRSAVFAGQVSVVVNPGVLQKK 213
+R+ + G + + PG L+
Sbjct: 200 ARTIILDGNARLRMVPGELRMP 221
>gi|294084812|ref|YP_003551572.1| hypothetical protein SAR116_1245 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664387|gb|ADE39488.1| hypothetical protein SAR116_1245 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 220
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 67/169 (39%), Gaps = 4/169 (2%)
Query: 39 VGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGK 98
VGW L + S ++I++ D + +K Y + A A N+G
Sbjct: 49 VGWLGLYTKTSDVRVSIANIEVADDGGTQLTGARYKGTTKTGKTYEINATNAVEQ-NNGS 107
Query: 99 GIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMK-VKDNLRLDFETA 157
GII L + + G + + A + F+ ++ + ++ +K K N+ + E
Sbjct: 108 GIIQLSEPTGFITQSDG--GRINISALNGAFSQTDNLVDLTGMVVLKQTKQNVIMTTEAL 165
Query: 158 VLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
++ + S PV + D ++ R+ + +F G +V++
Sbjct: 166 SANIDAGEMQSDLPVEVVSPDAHITGQNIRVTDHGNVMMFGGTSKMVLH 214
>gi|254418437|ref|ZP_05032161.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196184614|gb|EDX79590.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 222
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 10/205 (4%)
Query: 9 KILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIM 68
+++L +++R R ++ + P + + G L + R S + + +
Sbjct: 19 RVVLAGARWRARSRRVKLYRRVLPIIILVLAGGVLTWTVFRT-VMSGVERKASQGQEVRL 77
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
K + +++ A+ A +G + + + A
Sbjct: 78 DKPLFHGQDAQGRAFTVGAQGAIRDPATGH----FRLVGPALKLNLGGRKVTEMTADGGT 133
Query: 129 FNLANHTLYISQPFKMKV-KDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
+N T+ I ++ L AV+D I S V ++A+
Sbjct: 134 YNEQARTVTIGPNVRISDGGSGFVLTTPEAVVDTSTGIITGSRGVQGAGPIGTINASSYA 193
Query: 188 IENSSRSAVFAG----QVSVVVNPG 208
I + VF G ++S +NP
Sbjct: 194 IYDQGERVVFKGSGDTKISGTINPS 218
>gi|149185092|ref|ZP_01863409.1| hypothetical protein ED21_18602 [Erythrobacter sp. SD-21]
gi|148831203|gb|EDL49637.1| hypothetical protein ED21_18602 [Erythrobacter sp. SD-21]
Length = 222
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 7/202 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWI---RISTFSKSSIDLLDFEPMIMKKF 71
+ H R ++FL P + +++ IS + + E + +
Sbjct: 25 APGGSHDRLVRFLSRALPMGVGALAAMMIITPLSPRGEISFLLDRNEVAVITERLRVDNA 84
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+ + +SL A A +S +GI+ + D + + A ++++
Sbjct: 85 LYRGQDDEGRPFSLTAGEAVQK-SSAEGIVRMDDLVARMLMADG---PARVEAQGGQYDI 140
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
+ ++ +M+ D + VLD+++ T+ + V AN + +
Sbjct: 141 DEEIVAVNGTMRMEAADGYSMRASGVVLDLEDKTLVGAGGVEGAIPAGTFRANRLDADLN 200
Query: 192 SRSAVFAGQVSVVVNPGVLQKK 213
R +G + + PG L+
Sbjct: 201 QRRITLSGNARLRMVPGKLRMP 222
>gi|146278806|ref|YP_001168965.1| hypothetical protein Rsph17025_2773 [Rhodobacter sphaeroides ATCC
17025]
gi|145557047|gb|ABP71660.1| hypothetical protein Rsph17025_2773 [Rhodobacter sphaeroides ATCC
17025]
Length = 204
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 29/206 (14%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MKKFILSD 75
H R + +LK P A + ++ L + I+ +D E ++ + +
Sbjct: 10 HSRLVAWLKIVLPLAALAVLSTLFLVA-RTINPDDAIPYAEVDVEGLVREPRITAPTWAG 68
Query: 76 YSKDRVKYSLVAERAK--TSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ D S+ A A+ + L+ + T L A + +
Sbjct: 69 ITSDGAALSVEAAEARPGQTAGEEGRAASLR---ARLETPDGAVAS--LVAATGSLDGEA 123
Query: 134 HTLYISQPFKMKVKDN--LRLDFETAVLD----VKNITINSSDPVIITHSDFVLSANFAR 187
L + +++ L + TA LD + ++ PV + A R
Sbjct: 124 RLLRLGGGVELETSTGYHLTTEAMTAGLDETDVRSVGALEATGPV------GRIDAGSMR 177
Query: 188 IENS-----SRSAVFAGQVSVVVNPG 208
+ S F +V +V +P
Sbjct: 178 LSEDPEAPGSYVLTFGNRVKLVYDPT 203
>gi|83313033|ref|YP_423297.1| hypothetical protein amb3934 [Magnetospirillum magneticum AMB-1]
gi|82947874|dbj|BAE52738.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 238
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 71/205 (34%), Gaps = 8/205 (3%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIV----GWFLLSSWIRISTFSKSSIDLLDFEPMIMKK 70
+ H F+ +K P V ++ W LS S +++ + ++MK
Sbjct: 28 GPFADHSHFVSVMKIALPALAVLLLGLVVIWPKLSQLESGFKLSFANLSPKSVDTLVMKN 87
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
+ +++ ++ A + +I L + + + ++ + A + ++
Sbjct: 88 ARYFGVDESNRPFAVTSDTATQ-MPGNQDLIHLVNPKADFTSTSG--ANIVVDAIAGVYH 144
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIEN 190
+ L +S + + TA +++ + T +PV + + I
Sbjct: 145 QSTKVLDLSGGVNLYHDTGYEIHTPTATVELASNTARGFEPVEGHGPQGAIRSTGFEITG 204
Query: 191 SSRSAVFAGQVSVVVNPGVLQKKEN 215
F G+ + + V K ++
Sbjct: 205 KHHDITFTGKSQLNLR-AVSHKAQD 228
>gi|304320834|ref|YP_003854477.1| hypothetical protein PB2503_06347 [Parvularcula bermudensis
HTCC2503]
gi|303299736|gb|ADM09335.1| hypothetical protein PB2503_06347 [Parvularcula bermudensis
HTCC2503]
Length = 239
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 79/216 (36%), Gaps = 12/216 (5%)
Query: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLS----SWIRISTFSKS 56
+ + R+++ + +H +++ L+ P V ++ + +S + R
Sbjct: 21 LSSVGRKSRRRISPRAAARHSLWVRRLRLIVPALGVGVLIAYAVSATPPTIDRAFVEEFR 80
Query: 57 SIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSE 116
+ID + + + Y + + + AE A +I E +R+
Sbjct: 81 NIDPQS-PNLRLNRPRHVGYDLEGNQVEIGAE-AAERLGPDSNLITFDRPEA---LRRAG 135
Query: 117 YGDMYLFAHSARFNLANHTLYISQPFKMKV---KDNLRLDFETAVLDVKNITINSSDPVI 173
G+ + A + F+ + L +S ++ +D + L A +D+ T+ SS+ V
Sbjct: 136 EGEDRVRARTGLFDSERNVLDLSDQVEVDYRWGRDTIVLSTPAASVDLNAQTVTSSNGVS 195
Query: 174 ITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPGV 209
++A+ + G V + ++
Sbjct: 196 GGGERGQIAADRVTAYQDEGRLLLEGNVRLRLDGDA 231
>gi|163745218|ref|ZP_02152578.1| hypothetical protein OIHEL45_06505 [Oceanibulbus indolifex HEL-45]
gi|161382036|gb|EDQ06445.1| hypothetical protein OIHEL45_06505 [Oceanibulbus indolifex HEL-45]
Length = 202
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 70/207 (33%), Gaps = 16/207 (7%)
Query: 16 KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE------PMIMK 69
K +H R + +LK FP + + + ++ I D E +
Sbjct: 2 KGDRHSRVVSWLKVLFPL---IALALLSTLFLLSRAIEPQAVIPFADKEVQDRLRDQQIT 58
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARF 129
S + D S AE+ T+ G +D E T+ Q + L + S RF
Sbjct: 59 GPFYSGTTADGDLISFSAEK-LTTPGGETGTNEAEDIEATLDLQDG--AKIILQSSSGRF 115
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ ++ ++ ++ E ++ + + S PV T ++A I
Sbjct: 116 DTGAEEAELAGDVRVSTSTGYQILSERMTTNLTTLDLLSPGPVEATSPAGKITAGSMAIT 175
Query: 190 NS----SRSAVFAGQVSVVVNPGVLQK 212
N +F V ++ P ++
Sbjct: 176 NRQNSAGSQLLFTKGVKLIYTPQATKE 202
>gi|302381885|ref|YP_003817708.1| hypothetical protein Bresu_0771 [Brevundimonas subvibrioides ATCC
15264]
gi|302192513|gb|ADL00085.1| protein of unknown function DUF1239 [Brevundimonas subvibrioides
ATCC 15264]
Length = 219
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 10/206 (4%)
Query: 9 KILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIM 68
++ + ++R R +Q + P V + G L + R S + + +
Sbjct: 17 RLAAEAGRWRARSRRVQLYRRLLPILIVVLAGGALTWTVFRT-VMSGVERSASESREISL 75
Query: 69 KKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+ + + AE A + G L L + ++ + L A +
Sbjct: 76 DNPMFHGQDAQGRSFVIGAEGAVRDPAT--GRFRLNGPVLRLNLGGTKITE--LTADAGI 131
Query: 129 FNLANHTLYISQPFKMKV-KDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
+N ++ I K+ L AV+D + V +SA
Sbjct: 132 YNETARSVTIGPNVKISDGGSGFTLTTPEAVVDTATGIVTGDKGVQGRGPLGTISATSYA 191
Query: 188 IENSSRSAVFAG----QVSVVVNPGV 209
I VF G +V ++P
Sbjct: 192 IYEQGGRVVFRGSGDNKVQGTISPSS 217
>gi|77464735|ref|YP_354239.1| hypothetical protein RSP_1154 [Rhodobacter sphaeroides 2.4.1]
gi|77389153|gb|ABA80338.1| hypothetical protein RSP_1154 [Rhodobacter sphaeroides 2.4.1]
Length = 204
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 59/199 (29%), Gaps = 15/199 (7%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS--TFSKSSIDLLDFEPMI-MKKFILSDY 76
H R + +LK P A + I+ L + + +D+ D + +
Sbjct: 10 HSRLVSWLKVVLPLAALAILSTLFLVARTINPDDAIPYADVDVADRVREPRITAPTWAGI 69
Query: 77 SKDRVKYSLVAE--RAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ D S+ A R S L+ + T M A + +
Sbjct: 70 TSDGAALSVEAAAARPGQSPGEEGRAAALR---ARIDTPDGASATMA--AETGALDSDAR 124
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS--- 191
L + ++ L E D+ + S + T + A R+
Sbjct: 125 LLRLGGGVEVTTSTGYHLTTEAVTADLDATDVRSDSALDATGPLGRIEAGSMRLTEDPEA 184
Query: 192 --SRSAVFAGQVSVVVNPG 208
S F +V ++ +P
Sbjct: 185 AGSYVLTFGNRVKLIYDPK 203
>gi|16127832|ref|NP_422396.1| hypothetical protein CC_3602 [Caulobacter crescentus CB15]
gi|221236652|ref|YP_002519089.1| hypothetical protein CCNA_03716 [Caulobacter crescentus NA1000]
gi|13425348|gb|AAK25564.1| hypothetical protein CC_3602 [Caulobacter crescentus CB15]
gi|220965825|gb|ACL97181.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 220
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 52/175 (29%), Gaps = 6/175 (3%)
Query: 29 FFFPFATVTIVGWFLL-SSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVA 87
P A ++ + W S++ + +I S D + + A
Sbjct: 45 LVLPAAIGVLLLAVIAQVGWRTYLAASRAPAEARTEIRLI--TPRFYGQSTDGRSFMITA 102
Query: 88 ERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVK 147
A + I L++ LT+ + A + L + ++
Sbjct: 103 RSAIRD-DVDPRRIILEEPALTLDLGSPT--PTRMTAKHGVYRQDTFGLNLKDDVRLDDG 159
Query: 148 DNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVS 202
+ R E + +D + ++ + + ++ + + VF G V
Sbjct: 160 EGYRFASEESFVDTRTGDVSGESTMNGEGPSGQVQSSAYSVYDKGDRIVFRGGVR 214
>gi|126463575|ref|YP_001044689.1| hypothetical protein Rsph17029_2815 [Rhodobacter sphaeroides ATCC
17029]
gi|221640649|ref|YP_002526911.1| hypothetical protein RSKD131_2550 [Rhodobacter sphaeroides KD131]
gi|332559628|ref|ZP_08413950.1| hypothetical protein RSWS8N_11235 [Rhodobacter sphaeroides WS8N]
gi|126105239|gb|ABN77917.1| protein of unknown function DUF1239 [Rhodobacter sphaeroides ATCC
17029]
gi|221161430|gb|ACM02410.1| Hypothetical Protein RSKD131_2550 [Rhodobacter sphaeroides KD131]
gi|332277340|gb|EGJ22655.1| hypothetical protein RSWS8N_11235 [Rhodobacter sphaeroides WS8N]
Length = 204
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 57/200 (28%), Gaps = 17/200 (8%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRIS--TFSKSSIDLLDFEPMI-MKKFILSDY 76
H R + +LK P A + I+ L + + +D+ D + +
Sbjct: 10 HSRLVSWLKVVLPLAALAILSTLFLVARTINPDDAIPYADVDVADRVREPRITAPTWAGI 69
Query: 77 SKDRVKYSLVAERAKTSFNSGKG-IIFLQDFELTVP--TQRSEYGDMYLFAHSARFNLAN 133
+ D + + + G + + + + A + +
Sbjct: 70 TSDGA------ALSVEAAAARPGQAPGEEGRAAALRARIDTPDGASATMAAETGALDSDA 123
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS-- 191
L + ++ L E D+ + S + T + A R+
Sbjct: 124 RLLRLGGGVEVTTSTGYHLTTEAVTADLDATDVRSDSALDATGPLGRIEAGSMRLTEDPE 183
Query: 192 ---SRSAVFAGQVSVVVNPG 208
S F +V ++ +P
Sbjct: 184 AAGSYVLTFGNRVKLIYDPK 203
>gi|254292596|ref|YP_003058619.1| hypothetical protein Hbal_0220 [Hirschia baltica ATCC 49814]
gi|254041127|gb|ACT57922.1| protein of unknown function DUF1239 [Hirschia baltica ATCC 49814]
Length = 214
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 14/205 (6%)
Query: 6 RRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP 65
RR L Q R + L+ F A + I +L+ + + S +SI
Sbjct: 15 RRVTTLTQ---ARFRSSLVGLLRMLF-MAGIAISAGWLIGPVVVHAFTSGASIQENSVNG 70
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+ M S ++ ++L A A ++ LQ P G + + A
Sbjct: 71 VTMLNPRFSGRDENGNAFTLTAGTA-QRRIDELDVVDLQQ-----PVLEDGLGGV-VRAR 123
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ ++ L ++ + L ++AV+ + + S P+ A+
Sbjct: 124 TGVYDKGKEMLTLTDNVHFVDASDYELTTDSAVVFISENRVVGSTPLRGEGPLGEFRADS 183
Query: 186 ARIENSSRSAVFAGQVS---VVVNP 207
+ + + + G V V V+P
Sbjct: 184 YEVVDGGKRTILIGNVWTQIVSVDP 208
>gi|288956947|ref|YP_003447288.1| hypothetical protein AZL_001060 [Azospirillum sp. B510]
gi|288909255|dbj|BAI70744.1| hypothetical protein AZL_001060 [Azospirillum sp. B510]
Length = 184
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 3/141 (2%)
Query: 60 LLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGD 119
D M K + +SLVA +A I+ L D + +
Sbjct: 31 TADAGQTEMLKPRYFSLDEHNQPFSLVAAKA-DKSTDQPDIVLLDDPRAEMTETTGTWVT 89
Query: 120 MYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDF 179
M +N L + + D A D++ PV
Sbjct: 90 MQSD--KGWYNQTTGILLMRGNVHVLRDDGNEFTTSEAEADIRKGNAWGDKPVTGQGPQG 147
Query: 180 VLSANFARIENSSRSAVFAGQ 200
++A R+ + ++ VF Q
Sbjct: 148 EINAIGFRMTDRGKNVVFLNQ 168
>gi|294675672|ref|YP_003576287.1| hypothetical protein RCAP_rcc00115 [Rhodobacter capsulatus SB 1003]
gi|294474492|gb|ADE83880.1| protein of unknown function DUF1239 [Rhodobacter capsulatus SB
1003]
Length = 199
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 60/198 (30%), Gaps = 13/198 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSW----IRISTFSKSSIDLLDFEPMIMKKFIL 73
+H + + K P + + ++ L S + +SK + L E +
Sbjct: 5 SRHTALVHWAKIALPLSALMLLSTLFLFSGKVDPTTAAIYSKVDVTTLAREQR-LTAPEF 63
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
S ++D ++ A A + D+ A S R + A
Sbjct: 64 SGLTEDGAALTVRAATAAPDPAGKGA--SASQIIAKLEEGPGVVTDLR--AKSGRIDPAA 119
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS-- 191
+ + ++ R+ E + I + V L A +I+
Sbjct: 120 GQIRLRDGVAVQTSSGYRISTEQLYMATDRTAITAPGAVSAEAPFGNLQAGRMQIDRKDA 179
Query: 192 --SRSAVFAGQVSVVVNP 207
VF G V ++ +P
Sbjct: 180 ETGSDLVFQGGVKLIYHP 197
>gi|260577296|ref|ZP_05845269.1| protein of unknown function DUF1239 [Rhodobacter sp. SW2]
gi|259020477|gb|EEW23800.1| protein of unknown function DUF1239 [Rhodobacter sp. SW2]
Length = 209
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 9/145 (6%)
Query: 68 MKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSA 127
M + + ++D ++ A+ A+ + G Q + T + A +
Sbjct: 61 MTEPAYAGVTEDGASLTVTADAARPDASGKGG--TAQTLRAELDTPDG--AHTSIVAQNG 116
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
F+ + ++ ++ + E V ++ + S+ PV T VLSA R
Sbjct: 117 TFDDTARQMRLNGGVQITTSTGYLMTTEALVSELDRTEVTSAGPVAGTGPLGVLSAGQMR 176
Query: 188 IE-----NSSRSAVFAGQVSVVVNP 207
I + S VF +V ++ P
Sbjct: 177 ITATEGVSGSYVLVFKNRVKLIYRP 201
>gi|89067362|ref|ZP_01154875.1| hypothetical protein OG2516_10996 [Oceanicola granulosus HTCC2516]
gi|89046931|gb|EAR52985.1| hypothetical protein OG2516_10996 [Oceanicola granulosus HTCC2516]
Length = 200
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 13/195 (6%)
Query: 17 YRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MKKFI 72
H ++ K P + ++ L + R T I D E + +
Sbjct: 2 ADHHSTYVALAKTILPLLALALLSTMFLFA--RAPTIESVEIPYADIEELAREQQISAPS 59
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
S + D +SL+AE A+ ++ L T+ + L A R + A
Sbjct: 60 FSGVTDDGSIFSLMAESAR--PVDDGDVVDLAAIRGTL--DAPGGATILLRAGEGRVDTA 115
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE--N 190
T +S +++ D ++ D+ I + + L+A +E +
Sbjct: 116 GRTARLSGLTRIETSDGYEVETNGVFADLDAGRIETDGALEAHAPYGELTAGRLVVETPD 175
Query: 191 SS-RSAVFAGQVSVV 204
+ F V +V
Sbjct: 176 GGSQLLNFQDGVRLV 190
>gi|329888477|ref|ZP_08267075.1| hypothetical protein BDIM_04010 [Brevundimonas diminuta ATCC 11568]
gi|328847033|gb|EGF96595.1| hypothetical protein BDIM_04010 [Brevundimonas diminuta ATCC 11568]
Length = 220
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 12/214 (5%)
Query: 2 DHLDRRNKILLQRS--KYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSID 59
D R ++ + R+ ++R R ++ + P + + G L + R S
Sbjct: 8 DEQKRADEARVARAGERWRTRSRRVKLYRRVLPIVILMLAGGALTWTVFRT-VMSGVERK 66
Query: 60 LLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGD 119
+ + + + + + A+ A +G + +
Sbjct: 67 ASESREIRLDNPMFHGQDAQGRSFVIGAQGAVRDPATGH----FRLVGPLLRLNLGARKT 122
Query: 120 MYLFAHSARFNLANHTLYISQPFKMKVKD-NLRLDFETAVLDVKNITINSSDPVIITHSD 178
L A + + I K+ L AV+D + + V
Sbjct: 123 TELTADGGTYLETQRKVVIGPNVKISDGGTGWTLVTPEAVVDTETGVVTGDKGVQGRGPL 182
Query: 179 FVLSANFARIENSSRSAVFAGQ----VSVVVNPG 208
++A+ I + + VF GQ VS +NP
Sbjct: 183 GSINASSYAIYDQGQRVVFNGQGETKVSGTINPA 216
>gi|296115073|ref|ZP_06833715.1| hypothetical protein GXY_04814 [Gluconacetobacter hansenii ATCC
23769]
gi|295978410|gb|EFG85146.1| hypothetical protein GXY_04814 [Gluconacetobacter hansenii ATCC
23769]
Length = 300
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 15/207 (7%)
Query: 7 RNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTF----SKSSIDLLD 62
R ++L + + ++ K+ P + ++G + + + + + +
Sbjct: 62 RQRLLPNANDLARRRAIMRSAKWALPLTALVLLGSIAAWPAVERAVIMHRGTMAQMSHVR 121
Query: 63 FEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGD--- 119
+ M + + A A+ I + +LT P + G
Sbjct: 122 VKSGSMLNATYRGVDDHGHPFMVTASEARQ--------ISPERIDLTTPQADTLLGPNNW 173
Query: 120 MYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDF 179
+Y+ A + + + L ++Q + D + TA +D+K+ I S +
Sbjct: 174 VYVTARNGVYIQHSQLLDLTQDVMLYRSDGTTMYSPTADIDMKHGVIVSDSWIHSEGPFG 233
Query: 180 VLSANFARIENSSRSAVFAGQVSVVVN 206
VL A + F G +++N
Sbjct: 234 VLDTQGAMLLIRDGIMQFRGPGRLLLN 260
>gi|167648910|ref|YP_001686573.1| hypothetical protein Caul_4955 [Caulobacter sp. K31]
gi|167351340|gb|ABZ74075.1| protein of unknown function DUF1239 [Caulobacter sp. K31]
Length = 212
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 50/182 (27%), Gaps = 6/182 (3%)
Query: 29 FFFPFATV-TIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVA 87
P A + +V W ++ + + + M S D + + A
Sbjct: 30 IVLPVAMIGILVAVGGQVVWRTVTAGDRRPTE--SKAQIRMITPRFYGQSSDGRPFIITA 87
Query: 88 ERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVK 147
A + +FL LT+ A + L + +M
Sbjct: 88 RSAVRD-EADLKRVFLDAPTLTLGVGSP--APTRSTADRGIYREDTLKLQLFGNVRMDDG 144
Query: 148 DNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNP 207
R A++D +N + + +N + + +F G V ++
Sbjct: 145 AGYRFASNEAMVDTRNGNTTGETALQGEGPTGQVQSNAYSVYDKGDRIIFRGGVKTRIDR 204
Query: 208 GV 209
Sbjct: 205 KT 206
>gi|89052718|ref|YP_508169.1| hypothetical protein Jann_0227 [Jannaschia sp. CCS1]
gi|88862267|gb|ABD53144.1| hypothetical protein Jann_0227 [Jannaschia sp. CCS1]
Length = 198
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 69/205 (33%), Gaps = 18/205 (8%)
Query: 15 SKYRQHVRFIQFLKFFFPFATV-TIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MK 69
++ + + + ++K P + + FLL++ +D E + +
Sbjct: 2 ARDNLYSKAVMWVKIILPLVALGLLSSIFLLAN--APDPDDALPYADVDIEQITRRQTVT 59
Query: 70 KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTV---PTQRSEYGDMYLFAHS 126
+ + D + L+A+ + F + ++ + A
Sbjct: 60 EPRFAGILGDGQEIVLIADTVTADVDQT------DQFLARMVDGRMDMGLTEELMIRADL 113
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA 186
++A ++ + D R+ E ++ + + + S PV +T ++A+
Sbjct: 114 GDIDMAAQLATLTDDVVLHTTDGYRMVSEVVIMALDVVNMRSPVPVHVTGPGIDVTADTM 173
Query: 187 RIE--NSSRSAVFAGQVSVVVNPGV 209
+ + F G V V+ +P
Sbjct: 174 ELTGPDGETILHFNGSVRVLYDPQS 198
>gi|241760850|ref|ZP_04758939.1| protein of unknown function DUF1239 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753180|ref|YP_003226073.1| hypothetical protein Za10_0943 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|241374469|gb|EER63930.1| protein of unknown function DUF1239 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552543|gb|ACV75489.1| protein of unknown function DUF1239 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 212
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 7/178 (3%)
Query: 32 PFATVTIVGWFLLSSWI---RISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAE 88
P A + +V ++ I +S E M +KK I + + L AE
Sbjct: 34 PVAIIIVVAMMAITPLIGRRDLSFMLSRDHISTSKERMNLKKAIYRGHDDHGRVFELKAE 93
Query: 89 RAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKD 148
A +S + +L D + + A R+N+ N+ L I ++ + +
Sbjct: 94 SATQPDSSDPQL-WLTDLVAEITLDSG---PATVTAPHGRYNMDNNILTIDGAAQLVMAN 149
Query: 149 NLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
R++ + VLD+ I S PV + ++ + AV G+ +
Sbjct: 150 GYRVNGQDVVLDLDKRLITSQRPVSGQSPNGHFQGQSLNVDLINGKAVMDGRTHTHFD 207
>gi|295691423|ref|YP_003595116.1| hypothetical protein Cseg_4087 [Caulobacter segnis ATCC 21756]
gi|295433326|gb|ADG12498.1| protein of unknown function DUF1239 [Caulobacter segnis ATCC 21756]
Length = 206
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 6/179 (3%)
Query: 29 FFFPFATVTIVGWFLL-SSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVA 87
P A ++ + W + + +I S D + + A
Sbjct: 31 IVLPIAIGALLLVVISQVGWRTYMAATHPPTEAKTEIRLI--TPRFYGQSTDGRSFMITA 88
Query: 88 ERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVK 147
A ++ I L + LT+ + A S + + L + ++
Sbjct: 89 RSAIRD-DADPRRILLDEPALTLDLGSPT--PTRMTAKSGVYRQDDFGLSLKDDVRLDDG 145
Query: 148 DNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
R E + +D + +NS + + ++ + + VF G V +
Sbjct: 146 TGYRFASEESFVDTRTGDVNSESALNGEGPSGQVQSSGYSVYDKGDRIVFRGGVRARLE 204
>gi|23009302|ref|ZP_00050401.1| hypothetical protein Magn03004219 [Magnetospirillum magnetotacticum
MS-1]
Length = 139
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 21 VRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKKFILSDY 76
++ L+ P A V + S ++ + + M+ LS +
Sbjct: 35 SARVRMLRRLIPVAAGLAVMGLAAVVLWGPLSGSVPNVSIGPISVSGTKVTMENPRLSGF 94
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQR 114
K Y +VA+ A+ II LQ V T
Sbjct: 95 RKGERGYEVVADAAQQDVR-KPSIIELQAMTGHVATDD 131
>gi|326388612|ref|ZP_08210205.1| hypothetical protein Y88_3013 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206863|gb|EGD57687.1| hypothetical protein Y88_3013 [Novosphingobium nitrogenifigens DSM
19370]
Length = 230
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 15/215 (6%)
Query: 7 RNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPM 66
R++ ++ + H R ++FL P ++G L I T LLD +
Sbjct: 9 RSRRQVKAAPGGSHDRMVRFLAVTLP----GMIGALLAVMLISPLTPRGEISFLLDRTKV 64
Query: 67 IMKKFILS-------DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGD 119
+ + + +S+ A A + + ++ ++D V
Sbjct: 65 AIVEDRMRVLGAMYRGEDDHGRTFSITAGSAVQH-TARENLVQMRDITARVLLDDG---P 120
Query: 120 MYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDF 179
L + ++ +++ ++ D R+ + A +D+ + + S+ PV
Sbjct: 121 AILTTDAGTYDFGQQDIFVPGALNLQTSDGYRMMTKGATIDLDHRRLVSTQPVEGRIPTG 180
Query: 180 VLSANFARIENSSRSAVFAGQVSVVVNPGVLQKKE 214
+A+ + +R G + + PG +
Sbjct: 181 TFNADRITADLGTRIVTLDGHAHLRMVPGRMNMPG 215
>gi|126724658|ref|ZP_01740501.1| hypothetical protein RB2150_12521 [Rhodobacterales bacterium
HTCC2150]
gi|126705822|gb|EBA04912.1| hypothetical protein RB2150_12521 [Rhodobacterales bacterium
HTCC2150]
Length = 198
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 13/199 (6%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MKKFIL 73
R + RFI ++K P + ++ +L S RI D E + +
Sbjct: 4 RGYSRFITWVKIILPVLALAMLSSLVLFS-KRIDPEQAIPFAESDVENLAKNQSIGSPTF 62
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
S +++ S+ A + + + F + L A +A + +
Sbjct: 63 STMTENGAAISISALSVLPN-AANPDMAFATSITAQ--IEGGGVDWAELKAENAEIDTSA 119
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE---- 189
+++ N L + + + +++ + + IT +F L A I
Sbjct: 120 QYADFEGNVQIETATNYVLRTQNLHTKLDKVDLSAPNKISITGDNFSLVAGSMNITEIEN 179
Query: 190 -NSSRSAVFAGQVSVVVNP 207
+ + VF V +V P
Sbjct: 180 SDENHLIVFKQGVKMVYQP 198
>gi|56551173|ref|YP_162012.1| hypothetical protein ZMO0277 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542747|gb|AAV88901.1| protein of unknown function DUF1239 [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 212
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 7/178 (3%)
Query: 32 PFATVTIVGWFLLSSWI---RISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAE 88
P A + +V ++ I +S E M +KK I + + L AE
Sbjct: 34 PVAIIIVVAMMAITPLIGRRDLSFMLSRDHISTSKERMNLKKAIYRGHDDHGRVFELKAE 93
Query: 89 RAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKD 148
A +S + +L D + + A R+N+ N+ L I ++ + +
Sbjct: 94 SATQPDSSDPQL-WLTDLVAEITLDSG---PATVTAPHGRYNMDNNILTIDGAAQLVMAN 149
Query: 149 NLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
++ + VLD+ I S PV + ++ + AV G+ +
Sbjct: 150 GYHVNGQDVVLDLDKRLITSQRPVSGQSPNGHFQGQSLNVDLINGKAVMDGRTHTHFD 207
>gi|83591353|ref|YP_425105.1| hypothetical protein Rru_A0013 [Rhodospirillum rubrum ATCC 11170]
gi|83574267|gb|ABC20818.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 274
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 55/200 (27%), Gaps = 16/200 (8%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIR----ISTFSKSSIDLLDFEPMIMKKFILSD 75
+ RF+ +K P ++G L I S++D + +
Sbjct: 50 YSRFVALMKLLLPSLAAAMLGVVLAWPQIADRTESLNLDFSALDPSAIDLKSVVNPRYLG 109
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+++ A+ A + LT P + S+
Sbjct: 110 TDSTDQPFTVTADLATEMGAGD------ERTRLTNPKGDLTQSSGKWLSLSSDLGYLTDQ 163
Query: 136 ---LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
+ + + D + A + + PV + + R+ +
Sbjct: 164 KQVVDLESGVLLYRDDGFQFQTNAARIHLDTDEAMGDQPVKGQGPGLEIVSEGFRVLDGG 223
Query: 193 RSAVFAGQVSVVV---NPGV 209
+F G+ +VV +P
Sbjct: 224 NRILFTGKAKLVVTESDPAA 243
>gi|330993407|ref|ZP_08317342.1| hypothetical protein SXCC_03305 [Gluconacetobacter sp. SXCC-1]
gi|329759437|gb|EGG75946.1| hypothetical protein SXCC_03305 [Gluconacetobacter sp. SXCC-1]
Length = 245
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 55/171 (32%), Gaps = 5/171 (2%)
Query: 38 IVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSG 97
I W + + + T + + + + + M + Y + A+ A+
Sbjct: 76 IAAWPAVQRAVIMHTGTMAQMSHVRVKSGSMLNPTYRGLDEHGRPYMITADEARQ---IS 132
Query: 98 KGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETA 157
I L + + +Y+ A + L ++ + D + TA
Sbjct: 133 SERIDLTNAAADTLMDNGNW--LYVTASEGVYIQHAQMLDLTHAVTLYRNDGTLMLTPTA 190
Query: 158 VLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPG 208
+D+++ I + + V+ ++ +F G +++N
Sbjct: 191 DIDMRHNIIVTDSWIHGEGPMGVMDVQGGMLDIHGGVMLFRGPGRMILNAA 241
>gi|114327363|ref|YP_744520.1| hypothetical protein GbCGDNIH1_0699 [Granulibacter bethesdensis
CGDNIH1]
gi|114315537|gb|ABI61597.1| hypothetical protein GbCGDNIH1_0699 [Granulibacter bethesdensis
CGDNIH1]
Length = 235
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 12/138 (8%)
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGD---MYLFAHSARFNL 131
+ Y++ A A+ + + L P + + + + + +
Sbjct: 94 GVDEQNRPYTVTAHAAEQ--------VDQERINLAQPKADATLQNGNWLMVQSKKGVYLQ 145
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSAN-FARIEN 190
L ++ + D + +TA L++ + ++SSD V + L A+ + +
Sbjct: 146 HLGMLDMTGDVTLYRDDGTVMTSQTASLNMHHGAVSSSDKVSVEGPFGTLDASHGFTLLD 205
Query: 191 SSRSAVFAGQVSVVVNPG 208
F G +V+N
Sbjct: 206 RGNIMQFHGPSRMVLNAA 223
>gi|310817097|ref|YP_003965061.1| hypothetical protein EIO_2686 [Ketogulonicigenium vulgare Y25]
gi|308755832|gb|ADO43761.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 219
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 63/207 (30%), Gaps = 15/207 (7%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MKKFILSD 75
+ R I LK P + ++ S I D + + + S
Sbjct: 8 YSRLIAMLKVVLPMGALAMMATLF---LFARSNTPPEEIPYSDINQIAQDPRISQPRFSG 64
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEY---GDMYLFAHSARFNLA 132
+ D S++A+ +G F + + P + + L A +
Sbjct: 65 VAGDGSTLSVIADE-LRPLPGSEGEAFGSNLRMLRPEGDAILPGGRTVSLVAGEGTYASL 123
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE--- 189
Y ++ D L ++ +D+ T+ + + L+A
Sbjct: 124 PQIAYFGGLVHIQSGDGLHMETSGMTIDMPAATLETDGAMEARSPFGQLTAGHMIATSGN 183
Query: 190 -NSSRSAVFAGQVSVVVNPGVLQKKEN 215
+ VF+G V ++ P + E+
Sbjct: 184 AQNGVQMVFSGGVRLLYLPQGTRPGED 210
>gi|302343388|ref|YP_003807917.1| hypothetical protein Deba_1958 [Desulfarculus baarsii DSM 2075]
gi|301640001|gb|ADK85323.1| protein of unknown function DUF1239 [Desulfarculus baarsii DSM
2075]
Length = 264
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 30/215 (13%)
Query: 4 LDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDF 63
LDRR +L+RS+ L + + + + + + + + D
Sbjct: 59 LDRRRTTILRRSQ----------LIIIATLSAIILGVA------VAVFVHEPARLPVFDD 102
Query: 64 E---PMIMKK--FILSDYSKDR-----VKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQ 113
E P++ + + K+SL A AK + + L D L +
Sbjct: 103 EGGSPLLAADGQPRMRGVTYTHVENGVRKWSLTASGAKQNPEAES--FTLADVRLEFFPK 160
Query: 114 RSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVI 173
G + + ++ R+ T+ + D +RL + + + T+++ PV
Sbjct: 161 GG--GKVTIRGNTGRYERGKRTIMLEGDVVATTHDGIRLVTDNLAYNDVDQTVDTDAPVH 218
Query: 174 ITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPG 208
I+ DF L A R+ VF V P
Sbjct: 219 ISGVDFDLKAKGMRVFVPQDKVVFKKDVVSNFIPS 253
>gi|91205590|ref|YP_537945.1| hypothetical protein RBE_0775 [Rickettsia bellii RML369-C]
gi|157827304|ref|YP_001496368.1| hypothetical protein A1I_04990 [Rickettsia bellii OSU 85-389]
gi|91069134|gb|ABE04856.1| unknown [Rickettsia bellii RML369-C]
gi|157802608|gb|ABV79331.1| hypothetical protein A1I_04990 [Rickettsia bellii OSU 85-389]
Length = 197
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 76/193 (39%), Gaps = 14/193 (7%)
Query: 22 RFIQFLKF--FFPFATVTIVGWFLLSSWI-----RISTFSKSSIDLLDFE-PMIMKKFIL 73
R +F KF F + G+ L+ S + K+ LD + +I+K +
Sbjct: 7 RRKKFWKFTYFLIILGILYAGYILVKSSYPTEENNTNIVEKAPEKNLDLKYNIILKDSVF 66
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
K+ Y + AE+A ++ + + ++ + ++A N +
Sbjct: 67 EGVDKNLNSYLVKAEQAIKDSDNKYKLDIINGIY-----NVNKNQSVTVYAKEGFLNEES 121
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
H L + K +D + D A +D+ N +I S P + H + ++++ ++ +
Sbjct: 122 HILDLKNDVKFYFED-MIFDTNDARIDLINKSIISDSPATLFHKNSTITSDSFNTQDDNN 180
Query: 194 SAVFAGQVSVVVN 206
+F G V ++
Sbjct: 181 IIIFKGNVYTTID 193
>gi|255262883|ref|ZP_05342225.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255105218|gb|EET47892.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 199
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 12/193 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRIST----FSKSSIDLLDFEPMIMKKFILSD 75
+ +F+ ++K P A + ++ L + S ++ ++ L E I S
Sbjct: 6 YSQFVGWMKIILPLAALGLLSTVFLFARAPDSGSDIPYADVDVETLAEEQRI-NAPNYSG 64
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ D + A A N+ + I + T E D + A + T
Sbjct: 65 VADDGATIKISATSANADPNNDQ-TIEATKVAAQIITVEGETID--ILASQGTVDSQAQT 121
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE----NS 191
+S ++ ++ D+++ ++ PV LSA IE ++
Sbjct: 122 ARLSGLARIITSTGYEMETNGVDADLESGLFETTGPVEARAPFGTLSAGRLVIEPATADT 181
Query: 192 SRSAVFAGQVSVV 204
+ VF V ++
Sbjct: 182 NTQVVFKDGVKLI 194
>gi|218659744|ref|ZP_03515674.1| hypothetical protein RetlI_08857 [Rhizobium etli IE4771]
Length = 71
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Query: 14 RSKYRQ---HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE 64
RS Y H ++ LK P A + + + + I + E
Sbjct: 18 RSAYGDALFHSARVRRLKILLPVAALIVAAGLTAVALVSIYLPENVKFEGAKIE 71
>gi|254477121|ref|ZP_05090507.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214031364|gb|EEB72199.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 199
Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 61/196 (31%), Gaps = 13/196 (6%)
Query: 20 HVRFIQFLKFFFPFATVTI-VGWFLLSSWIRISTFSKSSIDLL--DFEPMIMKKFILSDY 76
+ R + +LK P + + FLLS + + L + S
Sbjct: 4 YSRLVAYLKVLLPLTALALMSTVFLLSRGVETDAVIPFAQKDLKDRTSGQQITAPFFSGT 63
Query: 77 SKDRVKYSLVAERAKTSFNSGKGI-IFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ + + A+ A+ +G I LQ + G +++ +
Sbjct: 64 TTQGDEIMVTAQSARPGGANGPATAIDLQ---AEIRMAEG--GTIHVSSDIGELRPEKEI 118
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI---ENSS 192
++ D LR+ + + + +S PV L+A I +
Sbjct: 119 ASFRGDVEILSSDGLRVTTQELNAALNGVKADSPGPVEARGPIGTLTAGAMEIDTKTENG 178
Query: 193 RS-AVFAGQVSVVVNP 207
VF V ++ +P
Sbjct: 179 PVHMVFNKGVKLLYDP 194
>gi|254462325|ref|ZP_05075741.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206678914|gb|EDZ43401.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 203
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 14/194 (7%)
Query: 20 HVRFIQFLKFFFPFATVT-IVGWFLLSSWIRISTFSKSSIDL--LDFEPMIMKKFILSDY 76
+ R I+ LK P + + FLLS + + S E +
Sbjct: 8 YTRVIRGLKITLPLVALVLLSTMFLLSKKVDPTAAIALSDHAFRAKIERSQLSNPNYDGT 67
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+ S+ A+ A+ Q + + E M + A + + A +
Sbjct: 68 TGSGESMSVTAQSARPDPEIEGKAYG-QLVNADINLENGEV--MTVAADTGVVDEAQDLV 124
Query: 137 YISQPFKMKVKDNLRLDFETAVLD--VKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
++ + D DF+T+ L + + S+ V L A + +
Sbjct: 125 ILNGNVHIITTDGY--DFKTSQLTSLISKVEGESAGSVAGFGPPGTLDAGKMFVRTDDDT 182
Query: 195 ----AVFAGQVSVV 204
+F V +V
Sbjct: 183 GNLHLLFTQGVHLV 196
>gi|126732864|ref|ZP_01748655.1| hypothetical protein SSE37_18337 [Sagittula stellata E-37]
gi|126706640|gb|EBA05714.1| hypothetical protein SSE37_18337 [Sagittula stellata E-37]
Length = 204
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 61/196 (31%), Gaps = 12/196 (6%)
Query: 20 HVRFIQFLKFFFPFATV-TIVGWFLLSS--WIRISTFSKSSIDLLDFEPMIMKKFILSDY 76
+ R I +LK P A + + FLL+S + + ++ + + S
Sbjct: 8 YSRLIAWLKILLPIAALAMLSTIFLLASDREVLENVPFAEALRQGEVASEGVSSPYYSGT 67
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
++D ++ A RA G I + + + L + A
Sbjct: 68 TRDGDMLTMTARRAW---PLEDGDILADQYSARMQMGDGSV--IQLDSKKATMREGERKA 122
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE----NSS 192
++ +++ L V + ++ + PV L A I +
Sbjct: 123 FLDDGVRIESSLGYILTTNAMVSALDSVNAETLGPVAGNGPAEELEAGRMVIAPADGEGA 182
Query: 193 RSAVFAGQVSVVVNPG 208
F G V ++ P
Sbjct: 183 VQIHFTGGVKMIYRPA 198
>gi|83855388|ref|ZP_00948918.1| hypothetical protein NAS141_11671 [Sulfitobacter sp. NAS-14.1]
gi|83843231|gb|EAP82398.1| hypothetical protein NAS141_11671 [Sulfitobacter sp. NAS-14.1]
Length = 202
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 66/200 (33%), Gaps = 14/200 (7%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWI-----RISTFSKSSIDLLDFEPMIMKKFIL 73
++ R I +LK FP A + ++ L S I K D L + +
Sbjct: 5 RYTRLISWLKVLFPLAALGLLSTLFLLSRAIDPGQAIPFAEKEVQDRLRDQQIT--GPFF 62
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ + + + S A+ T + G+ ++ T E L + A F++A
Sbjct: 63 TGATSEGDELSFYAD-VLTRPDGQTGMNHAENLRAT--INTPEGSTFRLQSDLADFDIAE 119
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+ + RL E D+ + I S V T L A I +
Sbjct: 120 DVADLLGKVILTTSTGYRLQSEKITSDLSGLNIQSPGAVHGTTPGGTLEAGAMSITQTDE 179
Query: 194 ----SAVFAGQVSVVVNPGV 209
VF +V ++ P
Sbjct: 180 QTAPQLVFTNRVKLIYKPKS 199
>gi|157825779|ref|YP_001493499.1| hypothetical protein A1C_03550 [Rickettsia akari str. Hartford]
gi|157799737|gb|ABV74991.1| hypothetical protein A1C_03550 [Rickettsia akari str. Hartford]
Length = 199
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 68/195 (34%), Gaps = 19/195 (9%)
Query: 25 QFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-------------MIMKKF 71
+ K + + IVG F + + S + D+ + +I+K
Sbjct: 7 RRKKIWKSLYLLIIVGIFYIGYILIKSGYINEENDINVTKNRLKDTKNFDFQYNIILKDS 66
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
I +K+ Y + ERA L + + + A +
Sbjct: 67 IFEGVNKNLDAYKIKTERA---IKESDNKYKLDVINAIYNVNQDQ--TFIINAKEGFLDE 121
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
++ L + K+ D + + A +D+ N I + + + + ++++ I +
Sbjct: 122 GSNILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGNSSAKLFYKNSSITSDSFNIMDE 180
Query: 192 SRSAVFAGQVSVVVN 206
+ +F G VS +++
Sbjct: 181 TNIIIFKGNVSTIID 195
>gi|258405724|ref|YP_003198466.1| hypothetical protein Dret_1604 [Desulfohalobium retbaense DSM 5692]
gi|257797951|gb|ACV68888.1| protein of unknown function DUF1239 [Desulfohalobium retbaense DSM
5692]
Length = 192
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 12/189 (6%)
Query: 24 IQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE---PMIMKKFILSDYSKDR 80
+ LK A I+ W+ + + + M M+ L + R
Sbjct: 4 VGRLK---AVAAAIILMGMAAGGWLGWTYWQNQPSETTGPSLPVDMAMRSVHLQGGEQGR 60
Query: 81 VKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQ 140
++ L A A +G++ L+ LT+P Q + A R+N N +
Sbjct: 61 QEWDLRAANATYDR--DQGMVDLEQPVLTLPMQDGR---AVVRASRGRYNQDNGQATMWP 115
Query: 141 PFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQ 200
+ + ++ + + + ++ + V+ ++ A+I + + V G
Sbjct: 116 DVQAEYQNGTVRAQKAVFVR-QEDRLDLEEDVVFDWPGLHVTGKSAQILLEAETVVVDGG 174
Query: 201 VSVVVNPGV 209
V ++ V
Sbjct: 175 VQAELHSRV 183
>gi|119385334|ref|YP_916390.1| hypothetical protein Pden_2607 [Paracoccus denitrificans PD1222]
gi|119375101|gb|ABL70694.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 193
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 18/197 (9%)
Query: 21 VRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKS----SIDLLDF-EPMIMKKFILSD 75
R + +L+ P + I+ L R S +D + E + +
Sbjct: 5 SRIVAWLRVLLPLTALAILSVLFLLG--RKPDPEASIPYADVDPRELAERQAVTGPTYAG 62
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
++D + S+ A A+ + G+GI Q +T+ + D+ A S L
Sbjct: 63 VTRDGAQLSISAAEARPGGDKGEGIA--QAVHMTLRARDGRAADVSAGAAS----LQGEQ 116
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR-- 193
+ + + +M D L + + S D V + ++A + S +
Sbjct: 117 VRLGEGVRMTTADGWVLTAPDLLASTTEGRLVSEDEVNVLAPFGTMTAGRMELRPSEQGS 176
Query: 194 ---SAVFAGQVSVVVNP 207
+G V ++ P
Sbjct: 177 GDHVLDLSGGVRLIYRP 193
>gi|157964550|ref|YP_001499374.1| hypothetical protein RMA_0667 [Rickettsia massiliae MTU5]
gi|157844326|gb|ABV84827.1| hypothetical protein RMA_0667 [Rickettsia massiliae MTU5]
Length = 198
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 54/141 (38%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I +K+ Y + ERA L + + + + A
Sbjct: 61 IILKDSIFEGVNKNLNAYKIKTERA---IKESDNKYKLDIINAIYNVNQDQ--TLIINAK 115
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ ++ L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 116 EGFLDEESNILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGHSPAKLLYKNSSITSDS 174
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
++ + +F G VS +++
Sbjct: 175 FNTKDENNIIIFKGNVSTIID 195
>gi|85705766|ref|ZP_01036863.1| hypothetical protein ROS217_10712 [Roseovarius sp. 217]
gi|85669756|gb|EAQ24620.1| hypothetical protein ROS217_10712 [Roseovarius sp. 217]
Length = 204
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 12/196 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP----MIMKKFILSD 75
+ R + ++K P + ++ L S + ID LD E + K +
Sbjct: 8 YSRIVAWMKIILPLTALGLLSTLFLFS-RTVDPTQTVPIDQLDLEQRAQDLGATKPRFAG 66
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ D + + AE A+ + +I +D + D + + +A + T
Sbjct: 67 VTADGDEITFAAEIARPDRKTPDQLIA-EDITAQLRLSAGTVID--ITSANAEMQQGDMT 123
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
++ + +D E + + + V T ++A + N+S SA
Sbjct: 124 ASLTGRVHITTSTGYEIDTERLNAKLDEVYAETPGRVEATGPLGEVTAGRMLLHNNSESA 183
Query: 196 V----FAGQVSVVVNP 207
F V ++ P
Sbjct: 184 TPELLFTEGVKLIYRP 199
>gi|83941912|ref|ZP_00954374.1| hypothetical protein EE36_06748 [Sulfitobacter sp. EE-36]
gi|83847732|gb|EAP85607.1| hypothetical protein EE36_06748 [Sulfitobacter sp. EE-36]
Length = 202
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 14/200 (7%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWI-----RISTFSKSSIDLLDFEPMIMKKFIL 73
++ R I +LK FP A + ++ L S I K D L + +
Sbjct: 5 RYTRLISWLKVLFPLAALGLLSTLFLLSRAIDPGQAIPFAEKEVQDRLRDQQIT--GPFF 62
Query: 74 SDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ + + + S A+ T + G+ ++ T E L + A F++A
Sbjct: 63 TGATSEGDELSFYAD-VLTRPDGQTGMNHAENLRAT--INTPEGSTFRLQSDLADFDIAE 119
Query: 134 HTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
+ + RL E ++ + I S V T L A I +
Sbjct: 120 DVADLLGKVILTTSTGYRLQSEKITSELSGLNIQSPGAVHGTTPGGTLEAGAMSITQTDD 179
Query: 194 SA----VFAGQVSVVVNPGV 209
VF +V ++ P
Sbjct: 180 QIAPQLVFTNRVKLIYKPKS 199
>gi|51473688|ref|YP_067445.1| hypothetical protein RT0491 [Rickettsia typhi str. Wilmington]
gi|51460000|gb|AAU03963.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 201
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I++ I +K+ Y + ERA L ++ + + + A
Sbjct: 63 VILQDSIFEGVNKNLNAYKIKTERA---IKESGNKYKLDIINAIYSIKQDQ--TLIITAK 117
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ ++TL + K+ D + + A +++ N IN + + + + ++++
Sbjct: 118 EGFLDQESNTLDLKNDIKL-FVDEIIFNTNNARINLVNQNINGNSSAKLIYKNSSITSDS 176
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
N + +F G VS +++
Sbjct: 177 FNTMNENNIIIFKGNVSTIID 197
>gi|118579407|ref|YP_900657.1| hypothetical protein Ppro_0971 [Pelobacter propionicus DSM 2379]
gi|118502117|gb|ABK98599.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
Length = 188
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 7/187 (3%)
Query: 21 VRFIQFLKFFFPFATVT--IVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSK 78
R I+ V + FL S S + ++ ++
Sbjct: 4 SRNIRLALALLVVTAVIGIVAAIFLNGSKPAPSEPVSPQTP--RNVDLALRDARFTEVRN 61
Query: 79 DRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYI 138
+++VAERA + + L + + +R G++ + A ++ + + +
Sbjct: 62 GATVWTIVAERA--EYIKEGEVANLSGIRM-LFVKRPGTGNITVTAERGTYSTKSRNVTL 118
Query: 139 SQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFA 198
M + D ET ++D V L+A ++ + F
Sbjct: 119 RGTVHMTTDSGIVFDTETLDYHAATSRFVTNDSVTFRQQRMTLTARGMDLDVDGQVVRFH 178
Query: 199 GQVSVVV 205
V +V
Sbjct: 179 SAVDAIV 185
>gi|15892583|ref|NP_360297.1| hypothetical protein RC0660 [Rickettsia conorii str. Malish 7]
gi|20455406|sp|Q92HW0|Y660_RICCN RecName: Full=Uncharacterized protein RC0660
gi|15619748|gb|AAL03198.1| unknown [Rickettsia conorii str. Malish 7]
Length = 198
Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I +K+ Y + ERA N+ L + + + + A
Sbjct: 61 IILKDSIFEGVNKNLNAYKIKTERAIKESNNKY---KLDIINAIYNVNQDQ--TLIINAK 115
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ + L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 116 EGFLDEESSILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGHSPAKLLYKNSSITSDS 174
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
++ + +F G VS +++
Sbjct: 175 FNTKDENNIIIFKGNVSTIID 195
>gi|34580433|ref|ZP_00141913.1| hypothetical protein [Rickettsia sibirica 246]
gi|28261818|gb|EAA25322.1| unknown [Rickettsia sibirica 246]
Length = 197
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I +K+ Y + ERA N+ L + + + + A
Sbjct: 60 IILKDSIFEGVNKNLNAYKIKTERAIKESNNK---YKLYIINAIYNVNQDQ--TLIINAK 114
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ + L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 115 EGFLDEESSILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGHSPAKLLYKNSSITSDS 173
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
++ + +F G VS +++
Sbjct: 174 FNTQDENNIIIFKGNVSTIID 194
>gi|157828534|ref|YP_001494776.1| hypothetical protein A1G_03755 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933250|ref|YP_001650039.1| hypothetical protein RrIowa_0790 [Rickettsia rickettsii str. Iowa]
gi|157801015|gb|ABV76268.1| hypothetical protein A1G_03755 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908337|gb|ABY72633.1| hypothetical protein RrIowa_0790 [Rickettsia rickettsii str. Iowa]
Length = 198
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I SK+ Y + ERA N+ L + + + + A
Sbjct: 61 IILKDSIFEGVSKNLNAYKIKTERAIKESNNKY---KLDIINAIYNVNQDQ--TLIINAK 115
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ + L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 116 EGFLDEESSILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGHSPATLLYKNSSITSDS 174
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
++ + +F G VS +++
Sbjct: 175 FNTKDENNIIIFKGNVSTIID 195
>gi|149201445|ref|ZP_01878420.1| hypothetical protein RTM1035_17507 [Roseovarius sp. TM1035]
gi|149145778|gb|EDM33804.1| hypothetical protein RTM1035_17507 [Roseovarius sp. TM1035]
Length = 204
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 10/196 (5%)
Query: 20 HVRFIQFLKFFFPFATV-TIVGWFLLSSWIRISTFSKSSIDLLD--FEPMIMKKFILSDY 76
+ R + ++K P + + + FL S + + SS L+ + + +
Sbjct: 8 YSRIVAWIKIILPLSALGLLSTLFLFSRTVDPTLSVPSSQIDLEQRAQDLGATNPRFAGV 67
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+++ + AE A+ + ++ + +I + D + A A T
Sbjct: 68 TQEGDEIRFAAEFARPNRDTPENLIA-DGVTAQLRLNAGTVID--ITAGQADMQQGQMTA 124
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS-- 194
+ + +D E + + + V T L+A + N++ S
Sbjct: 125 SLMGQVHITTSTGYVIDTERLNSRLDEVYAETPGQVTATGPIGTLTAGRMLLHNNAESGE 184
Query: 195 --AVFAGQVSVVVNPG 208
+F V ++ PG
Sbjct: 185 PELLFTEGVKLIYQPG 200
>gi|67459111|ref|YP_246735.1| hypothetical protein RF_0719 [Rickettsia felis URRWXCal2]
gi|67004644|gb|AAY61570.1| unknown [Rickettsia felis URRWXCal2]
Length = 199
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 19/195 (9%)
Query: 25 QFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-------------MIMKKF 71
+ K + + IVG + + S + D+ + +I+K
Sbjct: 7 RRKKIWKSVYFLIIVGILYIGYILIKSGYINEENDINVTKKSLKDTKNFDLKYNIILKDS 66
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
I +K+ Y + ERA L + + + + A +
Sbjct: 67 IFEGENKNLNAYKIKTERA---IKESDNKYKLDIINAIYNVNQDQ--TLIINAKEGFLDE 121
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
++ L + K+ D + + A +D+ N I + + + + ++++ +
Sbjct: 122 ESNILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGNSSAKLLYKNSSITSDSFNTRDE 180
Query: 192 SRSAVFAGQVSVVVN 206
+ +F G VS +++
Sbjct: 181 NNIIIFKGNVSTIID 195
>gi|58040276|ref|YP_192240.1| hypothetical protein GOX1845 [Gluconobacter oxydans 621H]
gi|58002690|gb|AAW61584.1| Hypothetical protein GOX1845 [Gluconobacter oxydans 621H]
Length = 268
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 63/212 (29%), Gaps = 20/212 (9%)
Query: 1 MDHLDRRNKILLQRSK----YRQHVRFIQFL---KFFFPFATVTIVGWFLLSSWIRISTF 53
+ LD + QR + Q R L K+ P + ++ W IS
Sbjct: 36 LARLDSLRRAAFQRIRQAPDAEQLARRRSLLGFAKWALPGLALVLLSSIAA--WPEISHL 93
Query: 54 SKSS------IDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFE 107
+ + L E M++ Y + A G + L D
Sbjct: 94 MNQNRAALKEMARLRVESGNMEQATYRGLDAHNHPYMITARTTHQQ---GPDRVDLVDPV 150
Query: 108 LTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITIN 167
+ + + ++ + TL + + D L ++ +A LD+K I
Sbjct: 151 ADIQLSGNSWAHIHSD--RGVYMQHEQTLDLDDHVVLYRDDGLLMNGPSADLDLKADVIA 208
Query: 168 SSDPVIITHSDFVLSANFARIENSSRSAVFAG 199
S D V A ++ + F G
Sbjct: 209 SRDWVHAEGPFGRQDAQGYFLDQHAGIMQFTG 240
>gi|157803763|ref|YP_001492312.1| hypothetical protein A1E_02935 [Rickettsia canadensis str. McKiel]
gi|157785026|gb|ABV73527.1| hypothetical protein A1E_02935 [Rickettsia canadensis str. McKiel]
Length = 188
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 54/141 (38%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I +K+ Y++ ERA L + + + + A
Sbjct: 50 IILKDSIFEGVNKNLNAYTIKTERATKE---SDNKYKLDIINAIYNVNKDQ--HLIIHAQ 104
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ ++ L + K D + + A +D+ N I + + +++ ++++
Sbjct: 105 EGFLDEESNILDLKNDVKFFF-DKIIFNTNNARIDLVNQNITGNSSATLFYNNSSITSDS 163
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
+ + +F G VS ++N
Sbjct: 164 FNTRDKNNIIIFKGNVSTIIN 184
>gi|229586752|ref|YP_002845253.1| hypothetical protein RAF_ORF0606 [Rickettsia africae ESF-5]
gi|228021802|gb|ACP53510.1| Unknown [Rickettsia africae ESF-5]
Length = 198
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I SK+ Y + ERA N+ L + + + + A
Sbjct: 61 IILKDSIFEGVSKNLNAYKIKTERAIKESNNKY---KLDIINAIYNVNQDQ--TLIINAK 115
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ + L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 116 EGFLDEESRILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGHSPAKLLYKNSSITSDS 174
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
++ + +F G VS +++
Sbjct: 175 FNTKDENNIIIFKGNVSTIID 195
>gi|239947700|ref|ZP_04699453.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921976|gb|EER22000.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 136
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 51/139 (36%), Gaps = 6/139 (4%)
Query: 68 MKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSA 127
MK I +K+ Y + ERA L + + + + A
Sbjct: 1 MKDSIFEGVNKNLNAYKIKTERA---IKESDNKYKLDIINAIYNVNQDQ--TLIINAKEG 55
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
+ ++ L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 56 FLDEESNILDLKNDVKLFF-DEIIFNTNDARIDLVNKNITGHSPAKLLYKNSSITSDSFN 114
Query: 188 IENSSRSAVFAGQVSVVVN 206
++ + +F VS +++
Sbjct: 115 TKDENNIIIFKSNVSTIID 133
>gi|238650254|ref|YP_002916105.1| hypothetical protein RPR_00290 [Rickettsia peacockii str. Rustic]
gi|238624352|gb|ACR47058.1| hypothetical protein RPR_00290 [Rickettsia peacockii str. Rustic]
Length = 198
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I+K I SK+ Y + ERA N+ L + + + + A
Sbjct: 61 IILKDSIFEGVSKNLNAYKIKTERAIKESNNKY---KLDIINAIYNVHQDQ--TLIINAK 115
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ + L + K+ D + + A +D+ N I P + + + ++++
Sbjct: 116 EGFLDEESSILDLKNDVKLFF-DKIIFNTNDARIDLVNKNITGHSPAKLLYKNSSITSDS 174
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
++ + +F G VS +++
Sbjct: 175 FNTKDENNIIIFKGNVSTIID 195
>gi|189425228|ref|YP_001952405.1| hypothetical protein Glov_2169 [Geobacter lovleyi SZ]
gi|189421487|gb|ACD95885.1| protein of unknown function DUF1239 [Geobacter lovleyi SZ]
Length = 193
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 10/190 (5%)
Query: 21 VRFIQ-FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKD 79
R I+ L A+V +V L R + +S + M + + S+ +
Sbjct: 6 TRRIRQVLAVVIVTASVALVAAIL-FRQFRSTPPETASKPISPEIDMSITRLNFSEMRGN 64
Query: 80 RVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYIS 139
+ L AERA ++ G L + + G + + + + + H + +
Sbjct: 65 DKLWDLTAERA--DYDKETGTAKLAGVKTE--IFGGKAGGLIITSEAGSYLEEKHLVTMQ 120
Query: 140 QPFKMKVKDNLRLDFETAVLDVKN--ITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
+ + + + F T L+ ++ + S+ PV + L+A + A F
Sbjct: 121 KNVRAVTRKGMT--FTTEQLEYRSVPGLVVSNHPVKVVDGRLTLTAQGMEMSLHDEKARF 178
Query: 198 AGQVSVVVNP 207
G V VV
Sbjct: 179 HGSVEAVVEG 188
>gi|21328702|gb|AAM48708.1| hypothetical protein MBMO_EBAC000-60D04.76 [uncultured marine
proteobacterium]
Length = 202
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 67/196 (34%), Gaps = 8/196 (4%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSW---IRISTFSKSSIDLLDFEPMIMKKFILSDY 76
+ + +LK P A + ++ L S + S + + +
Sbjct: 9 YSALVAWLKTLLPIAALGLLSTIFLFSGKVDVTQSLPYAEHNVAEIIREQRITQPYFTGI 68
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+ + + + A A F + L+ +L V + + + + A + A T
Sbjct: 69 ASNGTEIAFSAAYASPQFENAD---ILEITDLFVVLRSTGDRTVQVTAGQGALDSATQTA 125
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA--RIENSSRS 194
IS+ + + + E +++K ++ + ++A ++ +
Sbjct: 126 QISKNVHIAALPDFWVTTEALDMNLKQGLASAIGGFQGVTALGEITAGEMHLQMTADDQQ 185
Query: 195 AVFAGQVSVVVNPGVL 210
VF V +V +P ++
Sbjct: 186 IVFINDVRLVYSPKLI 201
>gi|15604366|ref|NP_220882.1| hypothetical protein RP506 [Rickettsia prowazekii str. Madrid E]
gi|6647950|sp|Q9ZD41|Y506_RICPR RecName: Full=Uncharacterized protein RP506
gi|3861058|emb|CAA14958.1| unknown [Rickettsia prowazekii]
gi|292572119|gb|ADE30034.1| hypothetical protein rpr22_CDS490 [Rickettsia prowazekii Rp22]
Length = 201
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 53/141 (37%), Gaps = 6/141 (4%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+I++ I +K+ Y + ERA L + + + + A
Sbjct: 63 VILQDSIFEGVNKNLNAYKIKTERA---IKESGNKYKLDIINAIYNINQDQA--LIITAK 117
Query: 126 SARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ ++ L + K+ D + + A +++ N I + + + + ++++
Sbjct: 118 EGFLDQESNILDLKNDIKLFF-DEIIFNTNNARINLVNQNIYGNSSAKLLYKNSSITSDS 176
Query: 186 ARIENSSRSAVFAGQVSVVVN 206
+ + +F G VS +++
Sbjct: 177 FNTMDENNIIIFKGNVSTIID 197
>gi|126734479|ref|ZP_01750226.1| hypothetical protein RCCS2_09969 [Roseobacter sp. CCS2]
gi|126717345|gb|EBA14209.1| hypothetical protein RCCS2_09969 [Roseobacter sp. CCS2]
Length = 200
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/198 (10%), Positives = 64/198 (32%), Gaps = 14/198 (7%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKK----FILSD 75
+ + + + K P + ++ ST S I L + E + ++ S
Sbjct: 8 YSQLVGWAKIILPLCALGLLSTLF---LFARSTTEPSEIALAEVEAIAREQRVSAPEFSG 64
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ D + A A+ + + + + L + ++ + A + +
Sbjct: 65 LTDDGAVIVISANSARPHY-TQPDKVSIDGIRLRMDNTDG--SNIDVTATQGEIDGSTQI 121
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE----NS 191
++ ++ + +++ + S+ + I L+A + +
Sbjct: 122 ASFLGLARLVTSSGYEMETNGLIAELETGLVTSNGLLEIRAPFGQLTAGKVTFQVASEDI 181
Query: 192 SRSAVFAGQVSVVVNPGV 209
++ +F V ++ P
Sbjct: 182 AQQMLFTDGVRLLYVPQT 199
>gi|114769796|ref|ZP_01447406.1| hypothetical protein OM2255_09516 [alpha proteobacterium HTCC2255]
gi|114549501|gb|EAU52383.1| hypothetical protein OM2255_09516 [alpha proteobacterium HTCC2255]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 62/203 (30%), Gaps = 14/203 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI---MKKFILSDY 76
+ R I++ K P V ++ + SID + S
Sbjct: 8 YSRAIKWAKLIMPVIAVLLLASVFIFGKEDALRSGTLSIDADTINLTTDQKITNPQFSGL 67
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+ + L A A + I L ++ + + + + N +
Sbjct: 68 TNLGDSFILKAIEAMPD-SPSPEKIDL--IGPSLEFDALQGVGFKISSKNGSVNFIKQSA 124
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS----- 191
++ + + + + E L++K + + + V + + A +
Sbjct: 125 ELNGNVYIDMTNGYKAISEKIQLNLKLGNLIAPNSVEASGPYGKIIAGSMELFKDFDNKT 184
Query: 192 ---SRSAVFAGQVSVVVNPGVLQ 211
S + F+ V+++ P ++
Sbjct: 185 SQVSGNLNFSDGVTLIYLPSTVK 207
>gi|254485995|ref|ZP_05099200.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214042864|gb|EEB83502.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 202
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 17/208 (8%)
Query: 12 LQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIR-----ISTFSKSSIDLLDFEPM 66
+QR +Y R + +LK FP A + ++ L S I K D L + +
Sbjct: 1 MQRDRY---TRIVSWLKVLFPLAALGLLSTLFLLSRAIDPGQVIPFAEKEIQDRLRDQQI 57
Query: 67 IMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHS 126
+ + S A+ T+ G ++ T+ T L +
Sbjct: 58 T--APFFTGATAKGDMISFYAD-VLTTPGGQVGSNRAENIRATIKTAEGV--TFRLQSGM 112
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFA 186
A +LA ++ + R+ E ++ ++ + S V T L A
Sbjct: 113 ADIDLAQDHAELTGNVILMTSTGYRVTSERLTSELSSVNLQSPGAVYGTAPGGTLEAGAM 172
Query: 187 RI----ENSSRSAVFAGQVSVVVNPGVL 210
+ ++S +F +V ++ P L
Sbjct: 173 TVQQSETDTSPQLLFTNRVKLIYKPKPL 200
>gi|258541778|ref|YP_003187211.1| hypothetical protein APA01_06820 [Acetobacter pasteurianus IFO
3283-01]
gi|256632856|dbj|BAH98831.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635913|dbj|BAI01882.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638968|dbj|BAI04930.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642022|dbj|BAI07977.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645077|dbj|BAI11025.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648132|dbj|BAI14073.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651185|dbj|BAI17119.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654176|dbj|BAI20103.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 245
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 5/132 (3%)
Query: 75 DYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ + + A+ A ++ +I + + TQ +++ + +
Sbjct: 105 GVDEHNRPFMITADSAHQVNDNRMDLI---RPKADLLTQGG--SWLWVESEKGVYMQHAQ 159
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
L ++ + D L + A +DVK I S V L A +
Sbjct: 160 ILDLTGEVTLYRDDGLMMHSPVADIDVKRGIIASDSWVRAEGPFGSLDAKGYLLAQHEGI 219
Query: 195 AVFAGQVSVVVN 206
A F G +++N
Sbjct: 220 AQFRGPGQLILN 231
>gi|209542517|ref|YP_002274746.1| hypothetical protein Gdia_0335 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530194|gb|ACI50131.1| protein of unknown function DUF1239 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 269
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 25/222 (11%)
Query: 2 DHLDRRNKILLQRSKYRQH-------VRF---IQFLKFF----FPFATVTIVGWFLLSSW 47
D + R+ +L R+ +H R +++ K+ +I W +
Sbjct: 25 DDVARQRTVLHHRTTRARHLPNPDDIARRRMLVRWAKWVLPAAALALLGSIAAWPAIDRL 84
Query: 48 IRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFE 107
+ + ++ L E M Y + A++A+ +
Sbjct: 85 VNAQRNALHEMENLRIESGNMLGATYRGLDDHNRPYMITADQAQQ--------VTPDRIN 136
Query: 108 LTVPTQR---SEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNI 164
LT P + + + + L +++ + D + + TA +D+K
Sbjct: 137 LTGPVADTFTQGNDWLTIRSDQGVYMQHEQLLDLTRNVVLYRADGVIMTGVTADMDLKQG 196
Query: 165 TINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
+ S V VL A + +F G +++N
Sbjct: 197 IVASDQWVHAEGPFGVLDAQGFILSQHEGIGLFRGPGRLILN 238
>gi|162147900|ref|YP_001602361.1| hypothetical protein GDI_2116 [Gluconacetobacter diazotrophicus PAl
5]
gi|161786477|emb|CAP56059.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 269
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 25/222 (11%)
Query: 2 DHLDRRNKILLQRSKYRQH-------VRF---IQFLKFF----FPFATVTIVGWFLLSSW 47
D + R+ +L R+ +H R +++ K+ +I W +
Sbjct: 25 DDVARQRTVLHHRTTRARHLPNPDDIARRRMLVRWAKWVLPAAALALLGSIAAWPAIDRL 84
Query: 48 IRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFE 107
+ + ++ L E M Y + A++A+ +
Sbjct: 85 VNAQRNALHEMENLRIESGNMLGATYRGLDDHNRPYMITADQAQQ--------VTPDRIN 136
Query: 108 LTVPTQR---SEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNI 164
LT P + + + + L +++ + D + + TA +D+K
Sbjct: 137 LTGPVADTFTQGNDWLTIRSDQGVYMQHEQLLDLTRNVVLYRADGVIMTGVTADMDLKQG 196
Query: 165 TINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVN 206
+ S V VL A + +F G +++N
Sbjct: 197 IVASDQWVHAEGPFGVLDAQGFILSQHEGIGLFRGPGRLILN 238
>gi|83950823|ref|ZP_00959556.1| hypothetical protein ISM_06975 [Roseovarius nubinhibens ISM]
gi|83838722|gb|EAP78018.1| hypothetical protein ISM_06975 [Roseovarius nubinhibens ISM]
Length = 203
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 65/196 (33%), Gaps = 12/196 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIM----KKFILSD 75
H RF+ ++K P + ++ L S + + +D E S
Sbjct: 7 HTRFVGWMKIILPVIALGLLSTLFLLS-RTVDPTQDIPVTEVDLEQRAQDQGASNPSFSG 65
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
++ + + A + ++ ++ + + + + A + R + +
Sbjct: 66 VTQGGEQVTFEAVMVRPDLSADGQLLA-DRPNAKITLEGGTV--VTVTAANGRTSRNMMS 122
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE---NSS 192
+ + +L+ + V + + +T+ S PV L A +
Sbjct: 123 AELLGEVVVTTSQGYQLNSKRIVAEFEPLTVESPGPVTGKGPPGDLEAGRMHLTSSEEEG 182
Query: 193 RS-AVFAGQVSVVVNP 207
R+ +F G V +V P
Sbjct: 183 RTHLLFTGGVKLVYKP 198
>gi|163733024|ref|ZP_02140468.1| hypothetical protein RLO149_10200 [Roseobacter litoralis Och 149]
gi|161393559|gb|EDQ17884.1| hypothetical protein RLO149_10200 [Roseobacter litoralis Och 149]
Length = 205
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 72/206 (34%), Gaps = 20/206 (9%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE-PMIMKKFILSD-- 75
++ R + +LK P + ++ L S + S+I D E + ++
Sbjct: 8 RYSRMVAWLKVTLPLVALGMLSTLFLIS---RAVDPPSTIPFADSEVQERLTNQQVTGPY 64
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIF----LQDFELTVPTQRSEYGDMYLFAHSARFNL 131
Y+ +A A +G + ++ ++ + ++ + + A ++
Sbjct: 65 YTSMSANGDQIAVIA--ETMTGPTGVGGTNKGKNVDIEMKMASG--SNITAYGNDALIDI 120
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI--- 188
AN ++ K+ L + +L + + S V T L A R
Sbjct: 121 ANDRSTLNGDVKITTSTGYVLYSDELLLRMSVTDVTSPRAVRATTPLGDLEAGAMRFFVP 180
Query: 189 --ENSSRSAVFAGQVSVVVNPGVLQK 212
+ + VF V ++ NP +++
Sbjct: 181 EGQEDGQ-WVFTKGVKLLHNPDNVKE 205
>gi|317050777|ref|YP_004111893.1| hypothetical protein Selin_0589 [Desulfurispirillum indicum S5]
gi|316945861|gb|ADU65337.1| protein of unknown function DUF1239 [Desulfurispirillum indicum S5]
Length = 177
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 60/172 (34%), Gaps = 11/172 (6%)
Query: 34 ATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILS--DYSKDRVKYSLVAERAK 91
A ++ +L ++ + ++ ++ + D ++ YSL A+RA
Sbjct: 7 AVSLLLFAYLAYTFYQYGRAVPQMAEVTGRAGLVSTNVTIDRLDPESGKLLYSLKAQRAV 66
Query: 92 TSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLR 151
I L+ EL + S+ ++ A + + + + F D
Sbjct: 67 HGLQE----IALE--ELEMAFFDSQLQEVR--ALQGIYRQGEELVLLPRDFTATTVDGFV 118
Query: 152 LDFETAVLDVKNITINSSDPVIIT-HSDFVLSANFARIENSSRSAVFAGQVS 202
L + A+ V+ + S +P ++T F LS + + G +
Sbjct: 119 LRGKDAIYTVQEQRLVSENPFVLTGQEGFELSGDRIEVWREPARMRADGNIR 170
>gi|329121344|ref|ZP_08249970.1| hypothetical protein HMPREF9083_0431 [Dialister micraerophilus DSM
19965]
gi|327469753|gb|EGF15219.1| hypothetical protein HMPREF9083_0431 [Dialister micraerophilus DSM
19965]
Length = 177
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Query: 78 KDRVKYS-LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+D L A+R + + K ++ ++ + + + A SA FN + L
Sbjct: 52 RDGKLIWKLKADRV--NIDKDKNVMSIEG--AECIFNDNGI-SLNVNADSAIFNKNENVL 106
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
Y+ K D L E + K ++S P I L+A+
Sbjct: 107 YLKGSIKGHSDDGTSLKAENLKYESKTGILSSDKPFFIEKDGHKLTADS 155
>gi|313892353|ref|ZP_07825945.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
gi|313119212|gb|EFR42412.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
Length = 177
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Query: 78 KDRVKYS-LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+D L A+R + + K ++ ++ + + + A SA FN + L
Sbjct: 52 RDGKLIWKLKADRV--NIDKDKNVMSIEG--AECIFNDNGI-SLDVNADSAIFNKNENVL 106
Query: 137 YISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
Y+ K D + E + K ++S P I + L+A+
Sbjct: 107 YLKGSIKGHSDDGTSIKAENLKYESKTGILSSDRPFFIEKAGHKLTADS 155
>gi|89902982|ref|YP_525453.1| hypothetical protein Rfer_4235 [Rhodoferax ferrireducens T118]
gi|89347719|gb|ABD71922.1| protein of unknown function DUF1239 [Rhodoferax ferrireducens T118]
Length = 201
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 23/202 (11%)
Query: 26 FLKFFFPFATVTIVGWFLLSSWIRISTFSKSS----IDLLDFEPMIMKKFILSDYSKDRV 81
L + P + + L + W+ ST S + M+KF + +
Sbjct: 7 RLSLYLPV--ILMGVLALGTYWLVRSTPLLISHGLEAQVRHEPDYFMRKFSVKSFDDAGR 64
Query: 82 KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYI--- 138
L +E T L+ +++ + E G A A N + +
Sbjct: 65 ---LKSEVLGTDARHFPDSETLEIDLVSIRSFSEEGGLTTATAKRAVANADASEVQLFGE 121
Query: 139 ---------SQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ +++ + R +F A +D + + S PV +T + +A+ +
Sbjct: 122 AHVVRQPMADKAGQVQPRMEFRGEFLHAFMDTER--VKSHKPVELTRGNDKFTADAMDFD 179
Query: 190 NSSRSAVFAGQVSVVVNPGVLQ 211
N R G+V + P +
Sbjct: 180 NLKRVMELKGRVKGTLVPAAAR 201
>gi|110677768|ref|YP_680775.1| hypothetical protein RD1_0369 [Roseobacter denitrificans OCh 114]
gi|109453884|gb|ABG30089.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 202
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 20/203 (9%)
Query: 17 YRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE-PMIMKKFILSD 75
++ R + +LK P + ++ L S + S+I D E + ++
Sbjct: 3 ADRYSRMVAWLKVTLPLVALGMLSTLFLIS---RAVDPPSTIPFADSEVQERLTNQQVTG 59
Query: 76 --YSKDRVKYSLVAERAKTSFNSGKGIIF----LQDFELTVPTQRSEYGDMYLFAHSARF 129
Y+ +A A +G + ++ ++ + Y + A
Sbjct: 60 PYYTSMSANGDQIAVIA--ETMTGPTGVGGTNKGKNVDIEMKMASGTNITAY--GNDALL 115
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI- 188
++AN ++ ++ L + ++ + + + S V T L A R
Sbjct: 116 DIANDLSRLTGDVRITTSTGYVLLSDELLMRMSAMDVTSPGAVSATTPLGDLQAGAMRFF 175
Query: 189 ----ENSSRSAVFAGQVSVVVNP 207
+ + VF V +V P
Sbjct: 176 VPEGKEDGQ-WVFTNGVKLVHTP 197
>gi|254511013|ref|ZP_05123080.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221534724|gb|EEE37712.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 202
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 61/203 (30%), Gaps = 17/203 (8%)
Query: 15 SKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE----PMIMKK 70
++ +H R++QFLK P + ++ L S I T + + ++ +
Sbjct: 2 AEVDRHSRWVQFLKVLLPLVAILLLSSVFLFS-RSIDTDVSVPFTGQEIDERLTDQVVTR 60
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
++ + + A RA + + G++ L + +
Sbjct: 61 PDYKGVTRKGEEIHVEARRASQ--GGAEETPTASEVHGRFGLSNG--GEITLESDTGSIR 116
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSD--FVLSANFA-- 186
T + D + + +L+ I P I + +A
Sbjct: 117 PDKGTATFVGNVVITTADGI--QVTSDLLNTSLDEIRGDSPGQIDGTGPIGNFTAGRMTF 174
Query: 187 --RIENSSRSAVFAGQVSVVVNP 207
++ +F V ++ P
Sbjct: 175 GAEKKDGPVHILFTDGVKLIYEP 197
>gi|149912957|ref|ZP_01901491.1| hypothetical protein RAZWK3B_03175 [Roseobacter sp. AzwK-3b]
gi|149813363|gb|EDM73189.1| hypothetical protein RAZWK3B_03175 [Roseobacter sp. AzwK-3b]
Length = 204
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 12/196 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMK----KFILSD 75
H + + +LK P A + ++ L S I T + +D E + +
Sbjct: 8 HSQLVAWLKIILPLAALGLLSTLFLLS-RSIDTNNAIPFSDIDIEKRAREQGASNPAFAG 66
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ + + A A S I + + + E D+ + T
Sbjct: 67 VTDSGDQVIVNARTAWPDL-SNPERILAEAVDAQLLLTTGEVIDITSDSAEVLQQDYIAT 125
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS- 194
L + + R+ ET + S PV T L A + + +
Sbjct: 126 LIGN--VVVTTSTGYRMTTETLESRFDKLHAESLAPVSGTGPPGKLDAARMLLTSDPDTG 183
Query: 195 ---AVFAGQVSVVVNP 207
+F G V ++ P
Sbjct: 184 DAHLLFTGGVKLLYQP 199
>gi|119713542|gb|ABL97594.1| hypothetical protein MBMO_EB0-39F01.0005 [uncultured marine
bacterium EB0_39F01]
gi|161170292|gb|ABX59262.1| putative protein [uncultured marine bacterium EB000_55B11]
gi|297183820|gb|ADI19943.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 189
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 21/192 (10%), Positives = 56/192 (29%), Gaps = 14/192 (7%)
Query: 31 FPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI---MKKFILSDYSKDRVKYSLVA 87
P V ++ + SID + S + + L A
Sbjct: 1 MPVIAVLLLASVFIFGKEDALRSGTISIDADTINLTTDQKITNPQFSGLTNLGDSFILKA 60
Query: 88 ERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVK 147
A + I L ++ + + + + N + ++ + +
Sbjct: 61 IEAMPD-SPSPEKIDL--IGPSLEFDALQGVGFKISSKNGSVNFIKQSAELNGNVYIDMT 117
Query: 148 DNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS--------SRSAVFAG 199
+ + E L++K + + + V + + A + S + F+
Sbjct: 118 NGYKAISEKIQLNLKLGNLIAPNSVEASGPYGKIIAGSMELFKDFDNKTSQVSGNLNFSD 177
Query: 200 QVSVVVNPGVLQ 211
V+++ P ++
Sbjct: 178 GVTLIYLPSTVK 189
>gi|99079867|ref|YP_612021.1| hypothetical protein TM1040_0026 [Ruegeria sp. TM1040]
gi|99036147|gb|ABF62759.1| hypothetical protein TM1040_0026 [Ruegeria sp. TM1040]
Length = 199
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 17/204 (8%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFE------PMIMKKFI 72
++ R + +LK P + ++ L S + + SI + E +
Sbjct: 3 RYSRVVSYLKVALPLTALALLSTLFLIS---HNINTDPSIPFAEIELENRLRGQQVTAPF 59
Query: 73 LSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLA 132
+ + + ++ A +A D E + T + L +
Sbjct: 60 FTGTTATGQEITIAATKAL--PGGDGEGASASDLEAEILTTEGR--RILLLSDRGSIRPD 115
Query: 133 NHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
+ ++ D R++ E ++ + + S PV SA RI S
Sbjct: 116 QDLAVLVGNVRIITADGTRVESERLNAELSGLQVVSPGPVTAQGPMGDFSAGTMRIFTDS 175
Query: 193 RS----AVFAGQVSVVVNPGVLQK 212
++ F V +V +P +++
Sbjct: 176 KNAPVHIEFTEGVKLVYDPAKIER 199
>gi|260431734|ref|ZP_05785705.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415562|gb|EEX08821.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 199
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 19 QHVRFIQFLKFFFPFATVTIVGWFLLSSW---IRISTFSKSSIDLLDFEPMIMKKFILSD 75
++ R +QFLK P + ++ L S +S + ++ +
Sbjct: 3 RYSRMVQFLKVLLPLVAILLLSMVFLLSRSIETNVSGPFTEQDLDARVKSQMVTRPRFRG 62
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
++ + A +A S S +G+ + G + L + + +
Sbjct: 63 TTRKGEDIQVEAVQA--SRGSAEGVPTASRLQGRFGLTNG--GVITLDSETGMLHPNKGE 118
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI----ENS 191
S M D +R+ + + I + PV SA R +
Sbjct: 119 AVFSGDVVMTTTDGIRVTTDLLNTSLDEIRGETPGPVQAFGPIGRFSAGRMRFGAEKTDG 178
Query: 192 SRSAVFAGQVSVVVNP 207
+F V +V P
Sbjct: 179 PVHILFTDGVKLVYEP 194
>gi|149925778|ref|ZP_01914042.1| hypothetical protein LMED105_06122 [Limnobacter sp. MED105]
gi|149825895|gb|EDM85103.1| hypothetical protein LMED105_06122 [Limnobacter sp. MED105]
Length = 199
Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 10/186 (5%)
Query: 25 QFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYS 84
QF+ FA WF + S + + + S S ++ F + + KYS
Sbjct: 17 QFIPLLLTFALAATSYWFAIQSELSLFSTSGKSDPTSS--DYYLRNFSVQSHDLAENKYS 74
Query: 85 LVAERAKTSFNSGKGIIFLQDFEL-TVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFK 143
++ A G + + + S G + A + L +++
Sbjct: 75 IIRSNAAEHIPQG----NVWNITAPELEQFESGNGMVKGNAQKGVYLLDTDEIFLRDNVV 130
Query: 144 MKVKD-NLRLDFETAVLDVKNI--TINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQ 200
+ ++ L ++ + + NI I++ V++T A A + N + G
Sbjct: 131 VTSQNEGLLTTMKSEEIRIDNITNEISTDKNVLVTRPGQRFEAQGATLNNDTGELTAQGS 190
Query: 201 VSVVVN 206
+ +
Sbjct: 191 IKFRIE 196
>gi|163738082|ref|ZP_02145498.1| hypothetical protein RGBS107_06709 [Phaeobacter gallaeciensis
BS107]
gi|161388698|gb|EDQ13051.1| hypothetical protein RGBS107_06709 [Phaeobacter gallaeciensis
BS107]
Length = 199
Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 8/141 (5%)
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
S + + + A A+ + E + G L + +
Sbjct: 58 PFFSGTTAQGDEIMVTAALARPGGADAPATAV--NLEAEIKMTGG--GRFLLSSDTGALR 113
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI-- 188
++ D LR+ + + + +S PV + + L+A +I
Sbjct: 114 PDKDMANFRGDVEILSSDGLRVTTQELNAALNGVRADSPGPVQASGAMGDLTAGAMQIDT 173
Query: 189 -ENSSRS-AVFAGQVSVVVNP 207
S VF V ++ +P
Sbjct: 174 KTESGAVHMVFNKGVKLLYDP 194
>gi|160901480|ref|YP_001567062.1| hypothetical protein Daci_6049 [Delftia acidovorans SPH-1]
gi|160367064|gb|ABX38677.1| protein of unknown function DUF1239 [Delftia acidovorans SPH-1]
Length = 205
Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 62/202 (30%), Gaps = 20/202 (9%)
Query: 22 RFI-QFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSI----DLLDFEPMIMKKFILSDY 76
R + L + P + + L + W+ + + + MK F + +
Sbjct: 6 RRVGDRLSLYLPV--LLMGLLALGTWWLVRNAPQPVASGTEKAVAHEPDYFMKDFSIKSF 63
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
L ++ + L+ + + E A A N +
Sbjct: 64 DATGR---LKSQIEGSVGRHYPDTDTLEIDNVRMFAVSPEGRITRGSAKRALSNADGSEV 120
Query: 137 YI-------SQPF-KMKVKDNLRLDFETAVLDV--KNITINSSDPVIITHSDFVLSANFA 186
+ +PF + +L F+ L ++S+ PV++T + +A+
Sbjct: 121 QMFGNAVVTREPFVTAGKQPQPQLQFQGEFLHAWPNEERVSSNQPVVLTRGNDRFTADSM 180
Query: 187 RIENSSRSAVFAGQVSVVVNPG 208
+ N G+V + P
Sbjct: 181 QYSNLDLVMKLQGRVRGTLQPS 202
>gi|292669890|ref|ZP_06603316.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648687|gb|EFF66659.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 180
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 6/170 (3%)
Query: 34 ATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTS 93
A V ++G + + T S + M + + + R ++L A+R
Sbjct: 11 AAVFLLGLIIWAIVTVPETPSPDAPSGPRI--MSYENNTIHEERDGRTVWTLTAKRVNVD 68
Query: 94 FNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLD 153
++ +Q E T + + L A + A + ++ + D L
Sbjct: 69 IDTND--TTMQGIEGTFYSADGR--TLALQADEGHMDSATRNIVLTGSIEATTSDGASLR 124
Query: 154 FETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSV 203
+ + + IT D + + + G V
Sbjct: 125 AQELKWTSAEGVLTAEGDAEITRDDIRATGDRIASTDEFERFTITGNARV 174
>gi|163742522|ref|ZP_02149908.1| hypothetical protein RG210_06534 [Phaeobacter gallaeciensis 2.10]
gi|161384107|gb|EDQ08490.1| hypothetical protein RG210_06534 [Phaeobacter gallaeciensis 2.10]
Length = 199
Score = 43.8 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 8/141 (5%)
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
S + + + A A+ + E + G L + +
Sbjct: 58 PFFSGTTAQGDEIMVTAALARPGGADAPATAV--NLEAEIKMIGG--GRFLLSSDTGALR 113
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI-- 188
++ D LR+ + + + +S PV + + L+A +I
Sbjct: 114 PDKDMANFRGDVEILSSDGLRVTTQELNAALDGVRADSPGPVQASGAMGDLTAGAMQIDT 173
Query: 189 -ENSSRS-AVFAGQVSVVVNP 207
S VF V ++ +P
Sbjct: 174 KTESGAVHMVFNNGVKLLYDP 194
>gi|99077984|ref|YP_611243.1| hypothetical protein TM1040_3851 [Ruegeria sp. TM1040]
gi|99034927|gb|ABF61981.1| hypothetical protein TM1040_3851 [Ruegeria sp. TM1040]
Length = 195
Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 20/200 (10%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKD 79
+ RFI +LK P A + G F ++ F++ + + +I ++
Sbjct: 4 YSRFIAYLKVLLPTAAL---GLFSTVFFLWSPKFNEDNAIPYTHDEIIR---RINHRQAT 57
Query: 80 RVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGD--------MYLFAHSARFNL 131
Y + + +L EL++P G + L A A F
Sbjct: 58 TPLYLSTTAKG-HNVRINADHTYL-GEELSLPIAEEVTGQLDFIDGSIVTLSADRAVFEE 115
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE-- 189
+ + S + + + L+ + ++ +T S PV + + L + RI
Sbjct: 116 HSDLVNFSGNVVLNSTEGITLESDQLTTNIVALTAYSDVPVRASSALGELRSGNMRITTI 175
Query: 190 -NSSRS-AVFAGQVSVVVNP 207
NS F V + P
Sbjct: 176 HNSGHLKMFFGNGVKLTYVP 195
>gi|222112649|ref|YP_002554913.1| hypothetical protein Dtpsy_3488 [Acidovorax ebreus TPSY]
gi|221732093|gb|ACM34913.1| protein of unknown function DUF1239 [Acidovorax ebreus TPSY]
Length = 206
Score = 43.5 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 23/203 (11%)
Query: 26 FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLD-----FEPMIMKKFILSDYSKDR 80
L + P V ++G L SW + + + M+ F + +
Sbjct: 11 RLSLYLP---VLLMGLLALGSWWLVRNAPRPQQPAQERPVSHEPDYYMRDFAVKSFDATG 67
Query: 81 VKYS-LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYIS 139
S + A+ ++ L+ + + + E + A+ A N + +
Sbjct: 68 RLQSEIRGTLARHYADND----TLEIDQARMRSVNEEGRVVTARANRALSNGDGSEVQLY 123
Query: 140 QPFKMKVKDNL--------RLDFETAVLD--VKNITINSSDPVIITHSDFVLSANFARIE 189
+ + + RL+F+ L V + S PV + +A+ +
Sbjct: 124 GNAIVTREASAPEGRAPVPRLEFQGEFLHAWVNEERVRSDQPVTLKRGADTFTADSMDYD 183
Query: 190 NSSRSAVFAGQVSVVVNPGVLQK 212
N + G+V + P +++
Sbjct: 184 NLEQVMQLRGRVRGTLMPAPVRR 206
>gi|254467110|ref|ZP_05080521.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206688018|gb|EDZ48500.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 199
Score = 43.1 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 13/196 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MKKFILSD 75
H R + +LK P A + ++ L S ++T + + E + + S
Sbjct: 4 HSRAVAYLKVLLPLAALVLMSTLFLIS-RGVNTDAVIPFAQKEIEDRMKGQQVTAPFFSG 62
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ + + A A+ + + D + + G + L + + +
Sbjct: 63 TTASGDEIMVTASLARPGRDGTPAVAS--DLSADIRLAQG--GRITLASETGSIHPDRDI 118
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI---ENSS 192
S ++ D L ++ E + + +S PV T + L+A I
Sbjct: 119 AQFSGNVQITSADGLVVETEELNTALSGLEADSPGPVRATGAIGELTAGNMHIGVKTEGG 178
Query: 193 RS-AVFAGQVSVVVNP 207
+F V ++ +P
Sbjct: 179 PVHMLFKNGVKLLYDP 194
>gi|159046127|ref|YP_001534921.1| hypothetical protein Dshi_3587 [Dinoroseobacter shibae DFL 12]
gi|157913887|gb|ABV95320.1| hypothetical protein Dshi_3587 [Dinoroseobacter shibae DFL 12]
Length = 200
Score = 43.1 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 8/161 (4%)
Query: 52 TFSKSSIDLLDF-EPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTV 110
T S I+L + E + + AE A+ + +
Sbjct: 42 TIPFSDIELEEIVEGQRILRPRYQTVLDSGALARFTAESARPDI-GNPDRFMASEITGRI 100
Query: 111 PTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSD 170
D+ + A+ T+ I ++ D L E A + + ++
Sbjct: 101 LQNDGLQVDIR--GAEGVMDNASRTVRIEGGLRLSRTDGYTLSTEGAEVRLDGQWGETTS 158
Query: 171 PVIITHSDFVLSANFARIENSS----RSAVFAGQVSVVVNP 207
VI+ LSA AR++ + R VF V +V P
Sbjct: 159 DVIVLGPGLTLSAGRARMQPDAATGNREVVFTDGVKLVYTP 199
>gi|121596411|ref|YP_988307.1| hypothetical protein Ajs_4130 [Acidovorax sp. JS42]
gi|120608491|gb|ABM44231.1| protein of unknown function DUF1239 [Acidovorax sp. JS42]
Length = 206
Score = 43.1 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 24/211 (11%)
Query: 18 RQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLD-----FEPMIMKKFI 72
R H+ + + L + P V ++G L SW + + + M+ F
Sbjct: 4 RLHLAWER-LSLYLP---VLLMGLLALGSWWLVRNAPRPQQPAQERPVSHEPDYYMRDFA 59
Query: 73 LSDYSKDRVKYS-LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
+ + S + A+ ++ L+ + + + E + A+ A N
Sbjct: 60 VKSFDATGRLQSEIRGTLARHYADND----TLEIDQARMRSVNEEGRVVTARANRALSNG 115
Query: 132 ANHTLYISQPFKMKVKDNL--------RLDFETAVLD--VKNITINSSDPVIITHSDFVL 181
+ + + + + RL+F+ L V + S PV +
Sbjct: 116 DGSEVQLYGNAIVTREASAPEGRAPVPRLEFQGEFLHAWVNEERVRSDQPVTLKRGADTF 175
Query: 182 SANFARIENSSRSAVFAGQVSVVVNPGVLQK 212
+A+ +N + G+V + P +++
Sbjct: 176 TADSMDYDNLEQIMQLRGRVRGTLMPAPVRR 206
>gi|222055370|ref|YP_002537732.1| protein of unknown function DUF1239 [Geobacter sp. FRC-32]
gi|221564659|gb|ACM20631.1| protein of unknown function DUF1239 [Geobacter sp. FRC-32]
Length = 191
Score = 42.3 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 8/183 (4%)
Query: 28 KFFFPFATVTIVGWFLLSSWIRIST----FSKSSIDLL-DFEPMIMKKFILSDYSKDRVK 82
K A ++ L + + + +D L D M ++K S+ K
Sbjct: 6 KIRLILAMAIVLAGVSLIATVMLKVEQRKPPAEKLDPLPDNVEMALQKVHYSEVKDGIKK 65
Query: 83 YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF 142
+ L A++A L+ L + + GD+ L A A + + +S
Sbjct: 66 WDLFADQALFDMKKE--AFHLKGVRLVL-VAETRIGDITLTADGADYYSKTKDVELSGNV 122
Query: 143 KMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVS 202
K + TA N I + DPV T +S ++ ++R V+
Sbjct: 123 VAKSDTGMHFSSATARFVGANALIRTDDPVRFTDGRIEVSGVGMELKTTTRDLKIKKGVT 182
Query: 203 VVV 205
+
Sbjct: 183 ADI 185
>gi|116789946|gb|ABK25447.1| unknown [Picea sitchensis]
Length = 477
Score = 42.3 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 37/112 (33%), Gaps = 15/112 (13%)
Query: 44 LSSWIRISTFSKSSIDLLDFEPM-IMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIF 102
++W+ + + +D + + + L Y+ ++Y+ A + +
Sbjct: 88 AANWVETNVTEFNLDGSVDIRFVAVGNEPFLESYNGTFIQYTFPA---LQNIQNALNKAG 144
Query: 103 LQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYIS---------QPFKMK 145
L + + TVP Y + +F + L I PF +
Sbjct: 145 LSNIKATVPLNADVYEG--VVPSEGQFRTDINDLMIQICQFLASNGAPFTVN 194
>gi|255658899|ref|ZP_05404308.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260848848|gb|EEX68855.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 187
Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/179 (10%), Positives = 50/179 (27%), Gaps = 17/179 (9%)
Query: 33 FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYS-------KDRVKYS- 84
+ I+ + + W + ID D + + Y KD VK
Sbjct: 8 LVALGILFFACVVIWAVRTVPEAPKIDHSDDDQ-----PRIMSYDNNTISEEKDGVKIWD 62
Query: 85 LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKM 144
L A+ + +S + + + + A ++ + I K+
Sbjct: 63 LTADHLEVDIDSRNAEMT--GITGHFYQKDGRSAE--VTADHGSYDNETKDIQIDGNVKI 118
Query: 145 KVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSV 203
D L + + + +++ +++ + +G+ +
Sbjct: 119 TTSDGATLTSDQLLWTAEQGMLSAIGQAKVSNDTIRAWGERIDSTDGFNKVKISGKAHI 177
>gi|121607155|ref|YP_994962.1| hypothetical protein Veis_0152 [Verminephrobacter eiseniae EF01-2]
gi|121551795|gb|ABM55944.1| protein of unknown function DUF1239 [Verminephrobacter eiseniae
EF01-2]
Length = 205
Score = 41.5 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 21/197 (10%)
Query: 30 FFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-----MIMKKFILSDYSKDRVKYS 84
+ V ++G L SW + +L+ + +MK F + ++ S
Sbjct: 11 LLQYLPVALMGLLALGSWWLVRNAPTPQWPILERQQRHQPDYVMKTFSVKNFDAAGRLQS 70
Query: 85 LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYI--SQPF 142
V R L+ + + + E A+ A N + + +
Sbjct: 71 QVQGR---ELRHYPDTGMLEIDQAHMRSISPEGQITVATANRALSNADGSQVQLFGNAIV 127
Query: 143 K---MKVKDN--------LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENS 191
+ K +R +F A + S PV +T +A+ ++
Sbjct: 128 TREPLPAKPGAPARPRLEMRSEFLQAFTSAHAERVRSDQPVTLTRGRDRFTADGMEYDHR 187
Query: 192 SRSAVFAGQVSVVVNPG 208
S+ G V V+ PG
Sbjct: 188 SQVLQLRGHVRGVLMPG 204
>gi|77919537|ref|YP_357352.1| hypothetical protein Pcar_1941 [Pelobacter carbinolicus DSM 2380]
gi|77545620|gb|ABA89182.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 165
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 6/131 (4%)
Query: 77 SKDRVKYSLVAER--AKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH 134
+ D ++ ++ + A S +QD + + M L + +
Sbjct: 33 TSDGLRRWMLTAKSAAYDDQQSKS---TVQDMRVEF-FDKQGRVQMTLTSREGVWFSETG 88
Query: 135 TLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
+ +K + + E + +++ PV + + LSA R
Sbjct: 89 EIEARGNVVVKTTEGYTVYTERLRYRSRADEVSTDLPVRVESVNMRLSARGMHYRVKERL 148
Query: 195 AVFAGQVSVVV 205
QV +
Sbjct: 149 LTLDSQVKASL 159
>gi|161523707|ref|YP_001578719.1| hypothetical protein Bmul_0527 [Burkholderia multivorans ATCC
17616]
gi|189351529|ref|YP_001947157.1| hypothetical protein BMULJ_02732 [Burkholderia multivorans ATCC
17616]
gi|160341136|gb|ABX14222.1| protein of unknown function DUF1239 [Burkholderia multivorans ATCC
17616]
gi|189335551|dbj|BAG44621.1| putative exported protein [Burkholderia multivorans ATCC 17616]
Length = 204
Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 58/201 (28%), Gaps = 23/201 (11%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-----MIMKKFILS 74
H R+ Q L P V +W + + + F ++
Sbjct: 4 HFRWTQLL----PLVAV---AALAGITWWLLQATLPPPGEGVTQPKRHTPDYFADNFSVT 56
Query: 75 DYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ + +Y L A + ++ + + P + A N
Sbjct: 57 ELDQSGTTQYRLTAAKLVHYEDTESSDLTMPAMRAFQP----GKPVVTTTAKRGTVNGDV 112
Query: 134 HTLYISQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSA-NFAR 187
+ + ++ ++ D + + V + I + PV + +++A + +
Sbjct: 113 SIVDLYDDARILRAAGGGDPQMQADSQHFRIFVNDDVIQTEKPVKLQRGLSLVNATDGMK 172
Query: 188 IENSSRSAVFAGQVSVVVNPG 208
N +R G V +
Sbjct: 173 YNNVTRVIELYGNVRGTIAAS 193
>gi|117925462|ref|YP_866079.1| filamentous haemagglutinin outer membrane protein [Magnetococcus sp.
MC-1]
gi|117609218|gb|ABK44673.1| filamentous hemagglutinin family outer membrane protein
[Magnetococcus sp. MC-1]
Length = 2834
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 15/131 (11%)
Query: 92 TSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYI------------- 138
+ +G G I + L S G + SA F LY+
Sbjct: 1168 QNGATGAGTISVDKLHLLGSGAYSLTGSNVVNTLSADF--TGGQLYLINSQALDVGTVAS 1225
Query: 139 SQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFA 198
+ + + D + A L + + + S V + L A I +S + + A
Sbjct: 1226 TSYGTTTTDNGITQDNQNATLKLSSGNLTISQNVNVGTGIIGLIAESGTIADSGTAVITA 1285
Query: 199 GQVSVVVNPGV 209
Q+ + + V
Sbjct: 1286 NQLGLNSSGSV 1296
>gi|221200000|ref|ZP_03573043.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221206845|ref|ZP_03579857.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221211207|ref|ZP_03584186.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221168568|gb|EEE01036.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221173500|gb|EEE05935.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221180239|gb|EEE12643.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 204
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 58/201 (28%), Gaps = 23/201 (11%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-----MIMKKFILS 74
H R+ Q L P V +W + + + F ++
Sbjct: 4 HFRWTQLL----PLVAV---AALAGITWWLLQATLPPPGEGVAQPKRHTPDYFADNFSVT 56
Query: 75 DYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ + +Y L A + ++ + + P + A N
Sbjct: 57 ELDQSGTTQYRLTAAKLVHYEDTESSDLTMPAMRAFQP----GKPVVTTTAKRGTVNGDV 112
Query: 134 HTLYISQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSA-NFAR 187
+ + ++ ++ D + + V + I + PV + +++A + +
Sbjct: 113 SIVDLYDDARILRAAGGGDPQMQADSQHFRIFVNDDVIQTEKPVKLQRGLSLVNATDGMK 172
Query: 188 IENSSRSAVFAGQVSVVVNPG 208
N +R G V +
Sbjct: 173 YNNVTRVIELYGNVRGTIAAS 193
>gi|254511487|ref|ZP_05123554.1| organic solvent tolerance protein [Rhodobacteraceae bacterium
KLH11]
gi|221535198|gb|EEE38186.1| organic solvent tolerance protein [Rhodobacteraceae bacterium
KLH11]
Length = 719
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 18/95 (18%)
Query: 117 YGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLD-------VKNITINSS 169
GD L A S ++ L ++ P ++ L ++A LD + +
Sbjct: 66 QGDAKLTAQSVTYDRETGELNLTGPIRIDQGGQSTLLADSAQLDSGIQNGLLMGARMVFD 125
Query: 170 DPVIITHSDFV-----------LSANFARIENSSR 193
V I ++A + + R
Sbjct: 126 QQVQIASVQATRAAGRYTQFSKVAATSCHVCANGR 160
>gi|256844993|ref|ZP_05550451.1| S-layer protein [Fusobacterium sp. 3_1_36A2]
gi|256718552|gb|EEU32107.1| S-layer protein [Fusobacterium sp. 3_1_36A2]
Length = 901
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 121 YLFAHSARFNLANHTLYISQP-FKMKVKDNLRL---DFETAVLDVKNITINSSDPVIITH 176
+ A ++N L ++P + + + + + F+T + I V+I +
Sbjct: 107 KINASELKYNRETQELISTKPMYAINEEKGVEILGNKFKTT---ISMDNITLEKGVVIKN 163
Query: 177 SDFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A NS++ G + +
Sbjct: 164 KLFSILADKANYNNSTKIITLEGNIRL 190
>gi|260429091|ref|ZP_05783068.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260419714|gb|EEX12967.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 202
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 46/142 (32%), Gaps = 7/142 (4%)
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
+ + + ++ A+RA + + + + + L A A +
Sbjct: 62 PNFAGTTDKGDRITMTADRA-EPLAADMARLRAHQLDAALDLVDG--SRITLRADQAVVD 118
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE- 189
+ T + + +D E ++ + I + PV + +A I
Sbjct: 119 DTDKTADLEGGVHITSSTGYVIDTERMLISLDRIGAETLTPVSGSGPAGRFTAGKLTIAA 178
Query: 190 -NSSRS--AVFAGQVSVVVNPG 208
+ + +F V+++ +P
Sbjct: 179 DENGENVQLLFTEGVNLIYDPK 200
>gi|187922606|ref|YP_001894248.1| hypothetical protein Bphyt_0599 [Burkholderia phytofirmans PsJN]
gi|187713800|gb|ACD15024.1| protein of unknown function DUF1239 [Burkholderia phytofirmans
PsJN]
Length = 202
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 57/195 (29%), Gaps = 20/195 (10%)
Query: 26 FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYS- 84
L P + +W + E ++ K DY D S
Sbjct: 5 RLTSLIPLVAM---AALAGITWWLLQATLPRQ-----NEGVVRPKEHTPDYFADNFSVSE 56
Query: 85 LVAERAKTSFNSGKGIIFLQD------FELTVPTQRSEYGDMYLFAHSARFNLANHTLYI 138
L + + + +I +D + + + + + + N + +
Sbjct: 57 LDQSGSTQYRLTAQSLIHYEDDELSDLVKPAMRAFQPGKPIVTATGDTGKVNGDASIVDL 116
Query: 139 SQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
++ ++ D + + V + I + PV + V++A+ N +R
Sbjct: 117 YDNARIVRAPGYGDPQMQADSQHFRVLVNDDVIETEKPVKLQRGMSVMTASGMNYNNVTR 176
Query: 194 SAVFAGQVSVVVNPG 208
G V + P
Sbjct: 177 VMQLFGNVKGNIAPS 191
>gi|291287218|ref|YP_003504034.1| hypothetical protein Dacet_1306 [Denitrovibrio acetiphilus DSM
12809]
gi|290884378|gb|ADD68078.1| protein of unknown function DUF1239 [Denitrovibrio acetiphilus DSM
12809]
Length = 179
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 25/186 (13%)
Query: 28 KFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDY-SKDRVKYSLV 86
KFF + IVG + S + S + +I++ + +++ F ++ + Y L
Sbjct: 6 KFFL--LVIFIVGAVVAVSLFK-SDKTNVTINVKK-DSVVINNFEMAKVVDEKNNFYKLN 61
Query: 87 AERAKTSFNSGK-GIIFLQDFELTVPTQRSEYGD-------MYLFAHSARFNLANHTLYI 138
A++A + + ++ T + D + + A + N
Sbjct: 62 ADQAVLNRKARSADLVDFVLVYKKGSTDLTASADKGFLEEEVRMDATGKIQGVINGR--- 118
Query: 139 SQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFA 198
F+ + DFET + ++ V IT ++ +S++ I N ++S F
Sbjct: 119 --DFETGESGSFHYDFET-----ETGVLDGD--VTITGTEGTISSDKLFIYNKTKSLEFD 169
Query: 199 GQVSVV 204
G V ++
Sbjct: 170 GNVKIL 175
>gi|296327903|ref|ZP_06870439.1| S-layer protein [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296155037|gb|EFG95818.1| S-layer protein [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 901
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKD-NLRL---DFETAVLDVKNITINSSDPVIITHS 177
+ A +++ L ++P K ++ + + F+T + I D V+I +
Sbjct: 108 IKASELKYDKTTQELISTKPMYAKNEEKGIEVLANKFKTT---ISMDNITLEDGVVIKNK 164
Query: 178 DFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A NSS+ G + +
Sbjct: 165 LFSILADKANYNNSSKIITLEGNIRL 190
>gi|254251393|ref|ZP_04944711.1| hypothetical protein BDAG_00578 [Burkholderia dolosa AUO158]
gi|124894002|gb|EAY67882.1| hypothetical protein BDAG_00578 [Burkholderia dolosa AUO158]
Length = 204
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 56/201 (27%), Gaps = 23/201 (11%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-----MIMKKFILS 74
H R+ Q L P V +W + + F ++
Sbjct: 4 HFRWTQLL----PLVAV---AALAGITWWLLQATLPPPGEGAAQPKRHTPDYFADNFSVT 56
Query: 75 DYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ + +Y L A + ++ + P + A N
Sbjct: 57 ELDQSGTTQYRLTAAKLVHYEDTESSDLTDPAMRAFQP----GKPVVTTTAKRGTVNGDV 112
Query: 134 HTLYISQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSA-NFAR 187
+ + ++ ++ D + + V + I + PV + V++A + +
Sbjct: 113 SIVDLYDDARIVRAAGGGDPQMQADSQHFRIFVNDDVIQTEKPVKLQRGLSVVNATDGMK 172
Query: 188 IENSSRSAVFAGQVSVVVNPG 208
N +R G V +
Sbjct: 173 YNNVTRVIELYGNVRGTIAAS 193
>gi|37678635|ref|NP_933244.1| hypothetical protein VV0451 [Vibrio vulnificus YJ016]
gi|37197375|dbj|BAC93215.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 187
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 62/180 (34%), Gaps = 13/180 (7%)
Query: 33 FATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKT 92
F+ + + F + SW + + + P ++ + S S + + Y+ R+
Sbjct: 3 FSRLIYLLLFFVVSWSCYYLYGQREAQSVQVAPN-LELPMFSGESLNNISYNSDGIRSHQ 61
Query: 93 ------SFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMK- 145
+ G ++ L + + + + + A A + L +S +M+
Sbjct: 62 ISSSHLDHYAKSGDTVFENPSLVI-YRDGDTIEWKITARRAVLDEE-QVLTLSDHVRMQN 119
Query: 146 VKDNLRLDFETAV---LDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVS 202
+ + + +D+ N ++ PV++ F + + + +A V
Sbjct: 120 LLPGASFEMLSTDKLEIDLSNRDFHADQPVLLIGPQFETTGEAMKGNLKTNTATLYNHVQ 179
>gi|51244615|ref|YP_064499.1| hypothetical protein DP0763 [Desulfotalea psychrophila LSv54]
gi|50875652|emb|CAG35492.1| unknown protein [Desulfotalea psychrophila LSv54]
Length = 191
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 5/148 (3%)
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
D++ + IM+K ++S + D+ + A++A S + I L D + +
Sbjct: 42 DIVQGQSFIMQKVVISQFEGDKKNTVIRAQKA--STGTTSKIFTLTDIDADL--YDETNN 97
Query: 119 DMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVL-DVKNITINSSDPVIITHS 177
+ + +A +N L + + D + F ++ + K +I D +I
Sbjct: 98 ITKVRSKTALYNQGTEILTLLGDVVVTKLDKDQQLFSQKLIHNGKKKSIFCPDKTLIVSG 157
Query: 178 DFVLSANFARIENSSRSAVFAGQVSVVV 205
+ S+ F G+V +
Sbjct: 158 ANTIRGGSFFYNLISKDYAFGGRVYCTL 185
>gi|304310280|ref|YP_003809878.1| Protein of unknown function DUF1239 [gamma proteobacterium HdN1]
gi|301796013|emb|CBL44217.1| Protein of unknown function DUF1239 [gamma proteobacterium HdN1]
Length = 189
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 24/181 (13%)
Query: 33 FATVTIVGWFLLS-SWIRISTFSKSSIDLLDFEPMIMKK-FILSDYSKDRVKYSLVAERA 90
V SW ++ +I+ + ++ + Y L+AE A
Sbjct: 12 LLAVLSSLGINGYLSWKT--APPANTAQADSLPDIILDRINQMNFDDQGDKHYQLLAETA 69
Query: 91 ----KTSFN--SGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKM 144
K G ++F + +++ A TL+++ +
Sbjct: 70 THFTKQEVTEFQGPNLVFF----------DKDERSWNATSNTGITRDAGETLHLNGDVVI 119
Query: 145 KVKDN----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQ 200
+ D+ + L ++ + K T + D V IT A R+E + +
Sbjct: 120 RKLDDKAQPVELRTQSMHVSPKAETAETDDEVDITQGGHHTHAKGLRVEMQTGKLTLQSK 179
Query: 201 V 201
V
Sbjct: 180 V 180
>gi|257466743|ref|ZP_05631054.1| S-layer protein [Fusobacterium gonidiaformans ATCC 25563]
gi|315917892|ref|ZP_07914132.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313691767|gb|EFS28602.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 797
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF-- 185
+ L I+ P+ + +KD + ++AV + K + S P I A+
Sbjct: 416 DYARETGVLTIANPYSITMKDGTNFEGKSAVYNEKTGNLVS--PGSIYMVGKDYVAHGHD 473
Query: 186 ARIENSSRSAVFAGQVSVV 204
+ N++ + G V++V
Sbjct: 474 LKYNNNTGAGTLEGPVNLV 492
>gi|237741669|ref|ZP_04572150.1| S-layer protein [Fusobacterium sp. 4_1_13]
gi|294785720|ref|ZP_06751008.1| S-layer protein [Fusobacterium sp. 3_1_27]
gi|229429317|gb|EEO39529.1| S-layer protein [Fusobacterium sp. 4_1_13]
gi|294487434|gb|EFG34796.1| S-layer protein [Fusobacterium sp. 3_1_27]
Length = 901
Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 121 YLFAHSARFNLANHTLYISQP-FKMKVKDNLRL---DFETAVLDVKNITINSSDPVIITH 176
+ A +FN L ++P + + + + + F+T + I D V+I +
Sbjct: 107 KINASELKFNRETQELISTKPMYAINEEKGVEILGNKFKTT---ISMDNITLEDGVVIKN 163
Query: 177 SDFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A +S++ G + +
Sbjct: 164 KLFSILADKANYNSSTKIITLEGNIRL 190
>gi|257452892|ref|ZP_05618191.1| S-layer protein [Fusobacterium sp. 3_1_5R]
gi|317059434|ref|ZP_07923919.1| predicted protein [Fusobacterium sp. 3_1_5R]
gi|313685110|gb|EFS21945.1| predicted protein [Fusobacterium sp. 3_1_5R]
Length = 797
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF-- 185
+ L I+ P+ + +KD + ++AV + K + S P I A+
Sbjct: 416 DYARETGVLTIANPYSITMKDGTNFEGKSAVYNEKTGNLVS--PGSIYMVGKDYVAHGHD 473
Query: 186 ARIENSSRSAVFAGQVSVV 204
+ N++ + G V++V
Sbjct: 474 LKYNNNTGAGTLEGPVNLV 492
>gi|254515274|ref|ZP_05127335.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
gi|219677517|gb|EED33882.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
Length = 192
Score = 38.4 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 7/192 (3%)
Query: 18 RQHVRFIQ-FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDY 76
Q R ++ L + + ++ L + R+ T + ++D+
Sbjct: 4 SQGFRRVRKRLSIPLVLSALLLIYTMLAPA-PRLITENTVQTTSARVPDSYAHDVSVNDF 62
Query: 77 SKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTL 136
+++ V +A F +GI+ L + SE G+ + A S + L
Sbjct: 63 NENGVLLGSTEAQALRRFP-REGIVELDEPRRR---NYSEDGEWFASARSGQLREKTDVL 118
Query: 137 YISQPFKMK-VKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
+ ++K D+L+ ++ ++++ S+ V I +D A I + A
Sbjct: 119 LLDHEVRLKYASDDLQFLTDSMIINIPKQAARSTSSVRIWQADNETVAEQIYINLDRQIA 178
Query: 196 VFAGQVSVVVNP 207
G V V P
Sbjct: 179 SLNGSVRTVYVP 190
>gi|261878665|ref|ZP_06005092.1| beta-glucosidase [Prevotella bergensis DSM 17361]
gi|270334669|gb|EFA45455.1| beta-glucosidase [Prevotella bergensis DSM 17361]
Length = 778
Score = 38.4 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
++ MI+K Y L A T ++ +G++ L++ +P S
Sbjct: 320 NVRRILEMILKTPRFKGYEYSNKP-DLKAHAKVTRQSATEGMVLLENRNGVLPMTASVKN 378
Query: 119 DMYLFAHSARF-NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKN 163
L S F + +++ + + + D L+ T +D+K
Sbjct: 379 IALLGCTSYDFIAGGTGSGNVNRAYTVSLLDGLKNAGYTFGVDLKK 424
>gi|325291769|ref|YP_004277633.1| hypothetical protein AGROH133_03499 [Agrobacterium sp. H13-3]
gi|325059622|gb|ADY63313.1| hypothetical protein AGROH133_03499 [Agrobacterium sp. H13-3]
Length = 218
Score = 38.4 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 19/91 (20%)
Query: 134 HTLYISQPFKMKVKDNLRLDF------------ETAVLDVKNITINSSDPVIITHSDFVL 181
+ IS+P + + + ++ + ++ P+ I
Sbjct: 30 QMMQISRPVSLGKSAGVTAAAFAFSCLATVAFAQNTTSNMTGVKLSGDQPIAIES----- 84
Query: 182 SANFARIENSSRSAVFAGQVSVVVNPGVLQK 212
+ I + R A F G V VV LQ
Sbjct: 85 --DQLEIRDQERKAYFTGNVKVVQGTTTLQA 113
>gi|254439813|ref|ZP_05053307.1| Organic solvent tolerance protein [Octadecabacter antarcticus 307]
gi|198255259|gb|EDY79573.1| Organic solvent tolerance protein [Octadecabacter antarcticus 307]
Length = 708
Score = 38.1 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 28/142 (19%)
Query: 93 SFNSGKGIIFLQDFELTVPTQRSEY----------GDMYLFAHSARFNLANHTLYISQPF 142
S +G L + VP + L A F+ L I P
Sbjct: 18 ELASAQGAATLVADTVFVPAGGQQLIAEGNVEVFFDGTRLSARRITFDQVADQLTIDGPV 77
Query: 143 KMKVKDNLRLDFETAVLD--VKNITINS-----SDPVIITHSDF-----------VLSAN 184
+ +D L +TA LD ++N + + ++ + ++A
Sbjct: 78 FIVTRDGTILTADTASLDPQLENGILRGARLVLDQQLQLSATQADRVDGRYTQLYQVAAT 137
Query: 185 FARIENSSRSAVFAGQVSVVVN 206
I + + ++ + +++
Sbjct: 138 SCHICANGETPLWEIRARRIIH 159
>gi|90415752|ref|ZP_01223686.1| hypothetical protein GB2207_10551 [marine gamma proteobacterium
HTCC2207]
gi|90333075|gb|EAS48245.1| hypothetical protein GB2207_10551 [marine gamma proteobacterium
HTCC2207]
Length = 187
Score = 38.1 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 120 MYLFAHSARFNLANHTLYISQPFK--MKVKDNLRLDFETAVLD--VKNITINSSDPVIIT 175
+ L A+S + A+ L + + + + L + T L V + + P +
Sbjct: 96 LALTANSGVLDNASGRLDLQDAVQGQITTAEGL-AELTTDSLTYLVDSSVATTDQPFKLL 154
Query: 176 HSDFVLSANFARIENSSRSAVFAGQVSVVVNP 207
+ S +I+ + + V +V V +P
Sbjct: 155 SAQGQASGTGLKIDLINDTVVIQSKVRVTHDP 186
>gi|288942542|ref|YP_003444782.1| hypothetical protein Alvin_2844 [Allochromatium vinosum DSM 180]
gi|288897914|gb|ADC63750.1| protein of unknown function DUF1239 [Allochromatium vinosum DSM
180]
Length = 204
Score = 38.1 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 32/100 (32%), Gaps = 7/100 (7%)
Query: 121 YLFAHSARFNLANHTLYISQPFKM-----KVKDNLRLDFETAVLDVKNITINSSDPVIIT 175
+ A + + ++ + + L E + + + PV I
Sbjct: 103 FAQARLGQVQAGGDQVRLTGAVRFDREADATNRPVHLQTEAMDIWRQTGLAETDLPVRID 162
Query: 176 HSDFVLSANFARI--ENSSRSAVFAGQVSVVVNPGVLQKK 213
++AN ++ S F G+ + ++P ++
Sbjct: 163 SDGDSVTANGMKLWYLEDSSRTSFHGRARIRLSPEPERQP 202
>gi|74316554|ref|YP_314294.1| hypothetical protein Tbd_0536 [Thiobacillus denitrificans ATCC
25259]
gi|74056049|gb|AAZ96489.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 190
Score = 38.1 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 42/142 (29%), Gaps = 10/142 (7%)
Query: 67 IMKKFILSDYSKDRVK-YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
IM+ F Y L A+R K S + L F E G++ A
Sbjct: 45 IMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTELELPRFVQI----DPEAGEIRAAAR 100
Query: 126 SARFNLANHTLYISQPFKMK--VKDNLRL-DFETAVLDV--KNITINSSDPVIITHSDFV 180
A + + + + TA L V + + S PV I
Sbjct: 101 EATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT 160
Query: 181 LSANFARIENSSRSAVFAGQVS 202
+ A + R +G+V
Sbjct: 161 VRAGAMHYDARLRVIKLSGRVH 182
>gi|254496898|ref|ZP_05109745.1| hypothetical protein LDG_1389 [Legionella drancourtii LLAP12]
gi|254353883|gb|EET12571.1| hypothetical protein LDG_1389 [Legionella drancourtii LLAP12]
Length = 667
Score = 38.1 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
Query: 89 RAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKD 148
R T N I + +P GD + S L + + +
Sbjct: 366 RTITVTNVSPNPIIIDSVSSPLPA---LPGDASVDTSSPTTCNIGTILNPNNSCTITINP 422
Query: 149 NLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANF 185
L + D IT+ +S + IT + ++AN
Sbjct: 423 GLISSSSSGCTD--GITLPTSSTITITGNSGSITANA 457
>gi|6969952|gb|AAF34121.1|AF123718_1 OmpB [Rickettsia prowazekii]
Length = 1603
Score = 38.1 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 24/139 (17%)
Query: 75 DYSKDRVKYSLVAERAKTSFNSGK-----GIIFLQDFE-LTVP-------TQRSEY-GDM 120
+ ++ A+ A T + G + L P + +
Sbjct: 106 GITVQEASNTINAQNALTKVHGGAAINANDLSGLGSITFAAAPSVLEFNLINPTTQEAPL 165
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
L A+S N N TL I+ F ++V DN +T +D + +S P
Sbjct: 166 TLGANSKIVNGGNGTLNITNGF-IQVSDNTFAGIKTINIDDCQGLMFNSTPDA------- 217
Query: 181 LSANFARIENSSRSAVFAG 199
AN ++ + F G
Sbjct: 218 --ANTLNLQAGGNTINFNG 234
>gi|5353763|gb|AAD42234.1|AF161079_1 outer membrane protein B [Rickettsia prowazekii]
Length = 1643
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 24/139 (17%)
Query: 75 DYSKDRVKYSLVAERAKTSFNSGK-----GIIFLQDFE-LTVP-------TQRSEY-GDM 120
+ ++ A+ A T + G + L P + +
Sbjct: 138 GITVQEASNTINAQNALTKVHGGAAINANDLSGLGSITFAAAPSVLEFNLINPTTQEAPL 197
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
L A+S N N TL I+ F ++V DN +T +D + +S P
Sbjct: 198 TLGANSKIVNGGNGTLNITNGF-IQVSDNTFAGIKTINIDDCQGLMFNSTPDA------- 249
Query: 181 LSANFARIENSSRSAVFAG 199
AN ++ + F G
Sbjct: 250 --ANTLNLQAGGNTINFNG 266
>gi|118076245|gb|ABK59989.1| OmpB [Rickettsia prowazekii]
Length = 1522
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 24/139 (17%)
Query: 75 DYSKDRVKYSLVAERAKTSFNSGK-----GIIFLQDFE-LTVP-------TQRSEY-GDM 120
+ ++ A+ A T + G + L P + +
Sbjct: 127 GITVQEASNTINAQNALTKVHGGAAINANDLSGLGSITFAAAPSVLEFNLINPTTQEAPL 186
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFV 180
L A+S N N TL I+ F ++V DN +T +D + +S P
Sbjct: 187 TLGANSKIVNGGNGTLNITNGF-IQVSDNTFAGIKTINIDDCQGLMFNSTPDA------- 238
Query: 181 LSANFARIENSSRSAVFAG 199
AN ++ + F G
Sbjct: 239 --ANTLNLQAGGNTINFNG 255
>gi|83647980|ref|YP_436415.1| hypothetical protein HCH_05317 [Hahella chejuensis KCTC 2396]
gi|83636023|gb|ABC31990.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 192
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 69/186 (37%), Gaps = 23/186 (12%)
Query: 28 KFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKF-------ILSDYSKDR 80
K+ + +V + ++++ + E ++ + + + Y+K+
Sbjct: 10 KWLYAALAAILVIYLAAYQ-------DEANVPFFEEEQLLKDEPDAFVINAVYTTYNKEG 62
Query: 81 VKYS-LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYIS 139
V S L ++ AK ++ G++ + E + ++ + + TL +
Sbjct: 63 VLTSRLQSQLAKHYPDTDTGVLTRPNLE----IFQQGEKSWHVESLEGELLIKQDTLKLR 118
Query: 140 QPFKMK--VKDNLRLDFETAVLDV--KNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
++ D + +T LD K+ I++ PV IT + L+A + +
Sbjct: 119 GDVEVNGASDDGAPILMQTQALDYNNKSRFISTDQPVKITSNINQLTAVGMEADIDKKLI 178
Query: 196 VFAGQV 201
V QV
Sbjct: 179 VLLSQV 184
>gi|206559209|ref|YP_002229970.1| hypothetical protein BCAL0816 [Burkholderia cenocepacia J2315]
gi|198035247|emb|CAR51122.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 204
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 54/203 (26%), Gaps = 33/203 (16%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKD 79
H R+ Q P V +W + + + K DY D
Sbjct: 4 HFRWTQ----MLPLVAV---AALAGVTWWLLQATLPPPGEGA-----VQPKRHTPDYFAD 51
Query: 80 RVK-----------YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
Y L A + ++ + P + A
Sbjct: 52 NFSVTELDQTGTTQYRLTAAKLVHYEDTEGSDLTDPAMRAFQP----GKPVVTTTAKRGT 107
Query: 129 FNLANHTLYISQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSA 183
N + + ++ ++ D + + V + I + PV + +++A
Sbjct: 108 VNGDVSIVDLYDDARILRAAGGGDPQMQADSQHFRIFVNDDVIQTEKPVKLQRGLSLVNA 167
Query: 184 -NFARIENSSRSAVFAGQVSVVV 205
+ + N +R G V +
Sbjct: 168 TDGMKYNNVTRVIELYGNVRGTI 190
>gi|93006316|ref|YP_580753.1| hypothetical protein Pcryo_1490 [Psychrobacter cryohalolentis K5]
gi|92393994|gb|ABE75269.1| protein of unknown function DUF1239 [Psychrobacter cryohalolentis
K5]
Length = 194
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 13/187 (6%)
Query: 30 FFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAER 89
T+ I G + +I+ D + + + +Y L AE
Sbjct: 5 VLIVITLIIAGLAGWFFKQQGEITPPVNIETSDVDYEATDIKAVQTNEQGETEYELSAES 64
Query: 90 AKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDN 149
+ + K ++ + + S+ + A +A + L +S F + +
Sbjct: 65 LTHNPVTNKD--EMKGIT--MNWEPSDKQRYRIEAGTAAISQQTGELSLSGGFSLISEGK 120
Query: 150 LR------LDFETAVL--DVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQV 201
+ A L + K+ + S++PV + A+ + + F GQV
Sbjct: 121 TANPEVEPIKVTGATLKGNTKSGQVYSNEPVKVEQGMNRFEASSMKANLETGDYEF-GQV 179
Query: 202 SVVVNPG 208
+V P
Sbjct: 180 AVSFTPA 186
>gi|242240980|ref|YP_002989161.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Dickeya dadantii Ech703]
gi|242133037|gb|ACS87339.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Dickeya dadantii Ech703]
Length = 154
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 24/47 (51%)
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVI 173
+N + L PF +++D + D ++ + ++ I+++ DP+
Sbjct: 32 GCYNQSTWRLNSGHPFTPELEDRIIADLQSTTIPLQGISLSGGDPLH 78
>gi|254788219|ref|YP_003075648.1| GH3 auxin-responsive promoter family protein [Teredinibacter
turnerae T7901]
gi|237687085|gb|ACR14349.1| GH3 auxin-responsive promoter family protein [Teredinibacter
turnerae T7901]
Length = 630
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 15/115 (13%)
Query: 66 MIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAH 125
+++ + Y++ +V Y ++ + + N ++ Y A
Sbjct: 217 IVIVSPAVEGYTEAKVPYGSISGQYIKNLN--------ENIRSKYTIPYELYEVKDYEAR 268
Query: 126 S------ARFNLANHTLYISQPFKMKVKDNLRLDFETAVL-DVKNITINSSDPVI 173
+ L + P + + F+ A+L D++ ++ +S V
Sbjct: 269 YYCMLLLGIADEDTSMLSSTNPSTLSLLAEKGEQFKDAILADIRAGSLAASCNVN 323
>gi|320538511|ref|ZP_08038372.1| endonuclease/exonuclease/phosphatase family protein [Treponema
phagedenis F0421]
gi|320144618|gb|EFW36373.1| endonuclease/exonuclease/phosphatase family protein [Treponema
phagedenis F0421]
Length = 353
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 16/127 (12%)
Query: 4 LDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDF 63
+ RR + ++R + + + FF P + + F SSW T S S + F
Sbjct: 2 IKRRAMMRIKRIRALVSIAALAVFLFFIPISCIGCSTVFGFSSWESPKTLSLVSYNTQTF 61
Query: 64 EPMIMKKFILSDYSKDRVKYS---------------LVAERAKT-SFNSGKGIIFLQDFE 107
I + + + ++S ++A A T NS I+ LQ+ E
Sbjct: 62 FDAIEDGQEFNGFKGSKSRWSPERYKVRLNRLREALMIATEALTGDINSLPDILILQEIE 121
Query: 108 LTVPTQR 114
Sbjct: 122 GERVIND 128
>gi|294486110|gb|ADE87926.1| conserved phage protein [Escherichia phage vB_EcoM_ECO1230-10]
Length = 217
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 10/117 (8%)
Query: 104 QDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKN 163
QD + +Y + +N A++TL I + N+ ++ + A ++ +
Sbjct: 85 QDDHAAPAASADQETTVYPDGTTVDYNSASNTLTI----TVAGAGNVIINCKQANVNTET 140
Query: 164 ITINSSDPVIITHSDF-----VLSANFARIENSSRSAVFAGQVSVVVNPGVLQKKEN 215
T+ +S V + D + A + SA G VS+ P + +N
Sbjct: 141 ATVTASTSVTMDTPDTFCTGNLTVAKSLTMGQEGGSATMKGAVSIE-GPSLTHNGKN 196
>gi|170700373|ref|ZP_02891383.1| protein of unknown function DUF1239 [Burkholderia ambifaria
IOP40-10]
gi|170134717|gb|EDT03035.1| protein of unknown function DUF1239 [Burkholderia ambifaria
IOP40-10]
Length = 204
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 56/198 (28%), Gaps = 23/198 (11%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEP-----MIMKKFILS 74
H R+ Q L P V +W + + F ++
Sbjct: 4 HFRWTQLL----PLIAV---AALAGITWWLLQATLPPPGEGAARPKRHTPDYFADNFSVT 56
Query: 75 DYSKDRV-KYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLAN 133
+ + +Y L A + ++ + P + A N
Sbjct: 57 ELDQSGTTQYRLTAAKLIHYEDTENSDLTDPAMRAFQP----GKPVVTTTAKRGTVNGDV 112
Query: 134 HTLYISQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSA-NFAR 187
+ + ++ ++ D + + V + I + PV + +++A + +
Sbjct: 113 SIVDLYDDARILRVAGGGDPQMQADSQHFRIFVNDDVIKTEKPVKLQRGLSLVNATDGMK 172
Query: 188 IENSSRSAVFAGQVSVVV 205
N +R G V +
Sbjct: 173 YNNVTRVIELYGNVRGTI 190
>gi|78222494|ref|YP_384241.1| hypothetical protein Gmet_1280 [Geobacter metallireducens GS-15]
gi|78193749|gb|ABB31516.1| protein of unknown function DUF1239 [Geobacter metallireducens
GS-15]
Length = 191
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 10/181 (5%)
Query: 36 VTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKT-SF 94
+ L + +I +S K E + + S ++ Y+ + +
Sbjct: 10 ILASVIVLATLYIAVSLALKLGAGGKKDEGLP-ALPRNVEISLSKIHYTETKDGVRQWDL 68
Query: 95 NSGKG-------IIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVK 147
+GKG + L D L + +R + G++ L + A + A + ++ K +
Sbjct: 69 YAGKGEYDKARDVTRLTDVRLVL-HERGKSGEITLVSDQADYFNAAKNVALTGNVVAKSE 127
Query: 148 DNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNP 207
+ A + + D V T +S + +R V+ V P
Sbjct: 128 SGMEFTTGRASYQSNRSLVVTDDRVRFTDGGMSVSGVGMELSVKTRQVRILRDVTATVAP 187
Query: 208 G 208
G
Sbjct: 188 G 188
>gi|254465681|ref|ZP_05079092.1| organic solvent tolerance protein [Rhodobacterales bacterium Y4I]
gi|206686589|gb|EDZ47071.1| organic solvent tolerance protein [Rhodobacterales bacterium Y4I]
Length = 730
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 117 YGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLD 160
G++ L A F+ N TL I P ++ + + A LD
Sbjct: 66 QGNIRLRARKITFDQTNGTLQIEGPIRIDQNGGITILANAAELD 109
>gi|253701987|ref|YP_003023176.1| hypothetical protein GM21_3393 [Geobacter sp. M21]
gi|251776837|gb|ACT19418.1| protein of unknown function DUF1239 [Geobacter sp. M21]
Length = 158
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 4/131 (3%)
Query: 77 SKDRVKYS-LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+K VK L AE+A +N K L LTV +++GD+ + A A ++
Sbjct: 26 TKQGVKRWDLAAEKA--EYNKKKDQTSLAVVRLTV-AGGAKFGDLVITADRAEYHNGTRN 82
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
+ +S +R + S D V + L + +R
Sbjct: 83 VVLSGKVTGVSSKGIRFSASNVSYLASRSLLVSEDRVRFSDGGNELEGVGMEFQTQTRRF 142
Query: 196 VFAGQVSVVVN 206
VS V
Sbjct: 143 KLKKDVSAVFR 153
>gi|71065484|ref|YP_264211.1| hypothetical protein Psyc_0924 [Psychrobacter arcticus 273-4]
gi|71038469|gb|AAZ18777.1| hypothetical protein Psyc_0924 [Psychrobacter arcticus 273-4]
Length = 194
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 13/187 (6%)
Query: 30 FFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAER 89
T+ I G + +I+ D + + + +Y L AE
Sbjct: 5 VLIIVTLIIAGLAGWFFKQQGEITPPVNIETSDVDYEATDIKAVQTNEQGETEYELSAES 64
Query: 90 AKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDN 149
+ + K ++ + + S+ + A +A + L +S F + +
Sbjct: 65 LTHNPVTNKD--EMKGIT--MNWEPSDEQRYRIEAGTAAISQQTGELSLSGGFSLISEGK 120
Query: 150 LR------LDFETAVL--DVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQV 201
+ A L + K+ + S++PV + A+ + + F GQV
Sbjct: 121 TGKPEVEPIKITGATLKGNTKSGQVYSNEPVKVEQGMNRFEASSMKANLETGDYEF-GQV 179
Query: 202 SVVVNPG 208
+V P
Sbjct: 180 AVSFTPA 186
>gi|126738422|ref|ZP_01754127.1| hypothetical protein RSK20926_08157 [Roseobacter sp. SK209-2-6]
gi|126720221|gb|EBA16927.1| hypothetical protein RSK20926_08157 [Roseobacter sp. SK209-2-6]
Length = 192
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 9/141 (6%)
Query: 71 FILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFN 130
S + + S+ A A+ + D + G + L + +
Sbjct: 52 PFFSGTTAHGDEISVTATVARADAEV---PLLATDLRAEIRMAAG--GRLALISDRGTVH 106
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI-- 188
+ ++ D L + E ++ + S + T L+A I
Sbjct: 107 PDQNLARFIGNVEITTADGLLVRTEALKTNLSTLQGESPGTINATGPLGELTAGRMEISA 166
Query: 189 -ENSSR-SAVFAGQVSVVVNP 207
+ +F V +V +P
Sbjct: 167 ETEGGPLTLLFTNHVKLVYDP 187
>gi|91781727|ref|YP_556933.1| hypothetical protein Bxe_A4119 [Burkholderia xenovorans LB400]
gi|91685681|gb|ABE28881.1| Putative exported protein [Burkholderia xenovorans LB400]
Length = 202
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 57/195 (29%), Gaps = 20/195 (10%)
Query: 26 FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYS- 84
L P + +W + E ++ K DY D S
Sbjct: 5 RLTSLIPLVAM---AALAGITWWLLQATLPRQ-----NEGVVRPKEHTPDYFADNFSISE 56
Query: 85 LVAERAKTSFNSGKGIIFLQD------FELTVPTQRSEYGDMYLFAHSARFNLANHTLYI 138
L + + + +I +D + + + + + + N + +
Sbjct: 57 LDQSGSTQYRLTAQSLIHYEDDELSDLVKPAMRAFQPGKPIVTATGDTGKVNGDASIVDL 116
Query: 139 SQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
++ ++ D + + V + I + PV + V++A+ N +R
Sbjct: 117 YDNARILRAPGYGDPQMQADSQHFRVLVNDDVIETEKPVKLQRGMSVMTASGMNYNNVTR 176
Query: 194 SAVFAGQVSVVVNPG 208
G V + P
Sbjct: 177 VMQLFGNVKGSIAPS 191
>gi|312129074|ref|YP_003996414.1| beta-glucosidase [Leadbetterella byssophila DSM 17132]
gi|311905620|gb|ADQ16061.1| beta-glucosidase [Leadbetterella byssophila DSM 17132]
Length = 785
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 1/98 (1%)
Query: 55 KSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQR 114
+++ +I+K Y L A + +G+I L++ +LT+P
Sbjct: 334 DVDVNVRRILDLILKTPRFKKYPYSNKP-DLKAHALIAREAAAEGMILLKNEKLTLPISS 392
Query: 115 SEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRL 152
+ + + +++ + + + D L
Sbjct: 393 ETKIAAFGVTSYDFISGGTGSGDVNEAYIISLMDGLSA 430
>gi|159184263|ref|NP_353366.2| hypothetical protein Atu0334 [Agrobacterium tumefaciens str. C58]
gi|159139590|gb|AAK86151.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 187
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 19/90 (21%)
Query: 135 TLYISQPFKMKVKDNLRLD------------FETAVLDVKNITINSSDPVIITHSDFVLS 182
+ IS+P + L + ++ + ++ P+ I
Sbjct: 1 MMQISRPVSLGRTAGLTAAGLFFSCLATVAFAQNTTSSMQGVKLSGDQPIAIES------ 54
Query: 183 ANFARIENSSRSAVFAGQVSVVVNPGVLQK 212
+ I + R A F G V VV LQ
Sbjct: 55 -DQLEIRDQERKAYFTGNVKVVQGTTTLQA 83
>gi|296161543|ref|ZP_06844348.1| protein of unknown function DUF1239 [Burkholderia sp. Ch1-1]
gi|295888187|gb|EFG68000.1| protein of unknown function DUF1239 [Burkholderia sp. Ch1-1]
Length = 202
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 57/195 (29%), Gaps = 20/195 (10%)
Query: 26 FLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYS- 84
L P + +W + E ++ K DY D S
Sbjct: 5 RLTSLIPLVAM---AALAGITWWLLQATLPRQ-----NEGVVRPKEHTPDYFADNFSISE 56
Query: 85 LVAERAKTSFNSGKGIIFLQD------FELTVPTQRSEYGDMYLFAHSARFNLANHTLYI 138
L + + + +I +D + + + + + + N + +
Sbjct: 57 LDQSGSTQYRLTAQSLIHYEDDELSDLVKPAMRAFQPGKPIVTATGDTGKVNGDASIVDL 116
Query: 139 SQPFKMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
++ ++ D + + V + I + PV + V++A+ N +R
Sbjct: 117 YDNARILRAPGYGDPQMQADSQHFRVLVNDDVIETEKPVKLQRGMSVMTASGMNYNNVTR 176
Query: 194 SAVFAGQVSVVVNPG 208
G V + P
Sbjct: 177 VMQLFGNVKGSIAPS 191
>gi|152990526|ref|YP_001356248.1| hypothetical protein NIS_0779 [Nitratiruptor sp. SB155-2]
gi|151422387|dbj|BAF69891.1| hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 166
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 54/162 (33%), Gaps = 19/162 (11%)
Query: 47 WIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDF 106
W K + E ++ F+ ++ D + L ++ G+ ++
Sbjct: 17 WFIFFKPFKYEVRPSVQESVVFYDFLYRSFAIDGSSFVLQGKK---------GVKRSKEI 67
Query: 107 ELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFET--AVLDVKNI 164
E+ P + A F+ +++ + F V ++ A D+ +
Sbjct: 68 EVIQPIAYRN--GEKITAQKGIFHQDKNSIDL---FDKIVYLGKEYTLKSSKAHYDISSE 122
Query: 165 TINSSDPVIITHSDFVLSANFARIENS-SRSAVFAGQVSVVV 205
++ P +I + + ++ R ++ +V ++
Sbjct: 123 ILSIDSPFVIESDRYTIFGKELKVNKKLGRI--WSKKVKAII 162
>gi|224014935|ref|XP_002297129.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968248|gb|EED86597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 974
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 14/116 (12%)
Query: 1 MDHLDRRNKILLQRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSS--------WIRIST 52
+D DR K+ + + ++ LK F TI FL+ +
Sbjct: 772 IDLYDRTQKM------SKSSSKRLKALKIFLRLVAFTISWGFLIWVTLGGTIHLLVSALM 825
Query: 53 FSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFEL 108
S I + ++ K + D VAE + + G L+ L
Sbjct: 826 PSAVGIIFIIIAGNLIVKTLCPDKKDQSNPNWKVAEAIRRAVKYAVGSKTLEIIAL 881
>gi|260881476|ref|ZP_05404494.2| ribonuclease R [Mitsuokella multacida DSM 20544]
gi|260848528|gb|EEX68535.1| ribonuclease R [Mitsuokella multacida DSM 20544]
Length = 897
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 7/90 (7%)
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKY-------SLVAERAKTSFNSGKGIIFLQDFELTVP 111
D ++P+ MK + +K S A+ K + D +P
Sbjct: 710 DNGAYDPLAMKNAVRGGRNKGPKPAKSDKNDKSDKAKGGKQDAKKRPARRPIDDIIADLP 769
Query: 112 TQRSEYGDMYLFAHSARFNLANHTLYISQP 141
T E + N +S+P
Sbjct: 770 TSEGEEKPAKKKRSHGKKNRGASGEKLSRP 799
>gi|154244024|ref|YP_001414982.1| OstA family protein [Xanthobacter autotrophicus Py2]
gi|154158109|gb|ABS65325.1| OstA family protein [Xanthobacter autotrophicus Py2]
Length = 230
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 144 MKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSV 203
+ + ++ N PV I A+ + + + AVF+G V V
Sbjct: 38 VATSSSAVAQTSNVPNALQGFAKNRDQPVRIN-------ADSLEVRDKDKVAVFSGNVLV 90
Query: 204 VVNPGVLQKKE 214
L+ K+
Sbjct: 91 TQGDTTLRSKD 101
>gi|171321641|ref|ZP_02910566.1| filamentous haemagglutinin family outer membrane protein
[Burkholderia ambifaria MEX-5]
gi|171093077|gb|EDT38300.1| filamentous haemagglutinin family outer membrane protein
[Burkholderia ambifaria MEX-5]
Length = 1106
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 14/83 (16%)
Query: 131 LANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLS---ANFAR 187
TL + P + L L +++ PV T + ++ A R
Sbjct: 399 RTTGTLKVDAPVTWSSDNGLTLTARQGDVEL-------DGPVTATGDNAGVTVNAAQQIR 451
Query: 188 IENSSRSAVFAG-QVSVVVNPGV 209
+ + G + +NPG
Sbjct: 452 VNDK---LTLDGRNAKLELNPGS 471
>gi|319935837|ref|ZP_08010265.1| hypothetical protein HMPREF9488_01096 [Coprobacillus sp. 29_1]
gi|319809192|gb|EFW05647.1| hypothetical protein HMPREF9488_01096 [Coprobacillus sp. 29_1]
Length = 499
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 37/216 (17%)
Query: 13 QRSKYRQHVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI-MKKF 71
++ K+ QH + LKF V + ++ S + + + I M
Sbjct: 54 EKDKHNQHSIKVTLLKF----VNVILAVLLVVGSLYAMKGSDFLAAITGGGDQTIEMHVA 109
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGK---GIIFLQDFELTVPTQRSEYGDMYLFAHSAR 128
+L Y ++ I + T E GD+ + A S
Sbjct: 110 VL-----KDSPY-----QSLNDLKGKPFGANTIDAVNINKTEAAIEDEIGDIDVTAAS-S 158
Query: 129 FNLANHTLY-------ISQPFKMKVKDNLRLDFETAVLDVKNITIN----SSDPVIITHS 177
+ ++L I + ++ D++ F + VK I + S++ +T
Sbjct: 159 YEQLINSLNQKSVEAIIIKAVDLESLDDIEKGFNEKIRTVKKIELKIPSVSANSAKVTKE 218
Query: 178 DFVLSANFARIENS-SRSAVFA-GQVSV--VVNPGV 209
F + + FA V++ +NP
Sbjct: 219 PFHIL---ISGTDKEGPIGTFALSDVNMIATINPTT 251
>gi|320528755|ref|ZP_08029907.1| putative ATP synthase F0, A subunit [Solobacterium moorei F0204]
gi|320130965|gb|EFW23543.1| putative ATP synthase F0, A subunit [Solobacterium moorei F0204]
Length = 648
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 19/91 (20%)
Query: 97 GKGIIFLQDFELTVPTQRSEYGDMYLF-AHS--------ARFNLANHTLYISQPFKMKV- 146
++ ++ V T + L A S ++ + L+ PF + +
Sbjct: 270 NLNMVVIRQIAARVRTTSGSMAMITLLLAASITMFCGGLGIYDTLRNNLFGRTPFDVSIL 329
Query: 147 -------KDNLRLDFETAVLDVKNITINSSD 170
+ + FE A LD+K +S
Sbjct: 330 ARSGHEISNGICAYFEDAGLDLK--QFSSKQ 358
>gi|171912110|ref|ZP_02927580.1| hypothetical protein VspiD_13060 [Verrucomicrobium spinosum DSM
4136]
Length = 258
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 100 IIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQP----FKMKVKDNLRLDFE 155
+ ++ ++ +P+ R + + A S L + I + F ++R+ +
Sbjct: 52 PVGQRNLDVKIPSFRDGRPNSLMRAGSMT-RLDEDNMAIEKMDIRMFGPTKDRDVRVQLK 110
Query: 156 TAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVV 205
TA + + T++S I+ DF + + + ++ G V +V+
Sbjct: 111 TATYHMPSATLSSEQRSRISREDFQMEGDSMVFDTKTQQGKMTGNVRMVI 160
>gi|66394677|ref|YP_240817.1| ORF007 [Staphylococcus phage X2]
gi|62636901|gb|AAX92012.1| ORF007 [Staphylococcus phage X2]
Length = 474
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 5/134 (3%)
Query: 72 ILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNL 131
IL Y ++ + + + N ++ ++ VP ++ + A+ F
Sbjct: 275 ILKGYEGQDLEEFMRGLKYYKAINVDGDG-GVETIQVEVPVSSTKEYIDLMRAYIMEFGQ 333
Query: 132 ANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITH-SDFVLSANFARIEN 190
+ L F LD+K + + V I F++ N +++
Sbjct: 334 GVD---FQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDFNNLKMDV 390
Query: 191 SSRSAVFAGQVSVV 204
F +
Sbjct: 391 KDIEISFNFNRMMN 404
>gi|84500655|ref|ZP_00998904.1| hypothetical protein OB2597_11871 [Oceanicola batsensis HTCC2597]
gi|84391608|gb|EAQ03940.1| hypothetical protein OB2597_11871 [Oceanicola batsensis HTCC2597]
Length = 162
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 116 EYGDMYLFAHSA--RFNLANHTLYI---SQPFKMKVKDNLRLDFETAVLDVKNITINSSD 170
+M L A ++ + + + + ++ + + A D+ TI
Sbjct: 64 VQAEMRLAAPRVLVTYDEEGERIRLLEATGGVTLVSGED-AAEAQRADYDIDAGTIVMEG 122
Query: 171 PVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPG 208
V++ + L++ ++ S +A +G+V ++NPG
Sbjct: 123 DVLLVQGESTLASQAMTVDLESGTAQMSGRVRTLLNPG 160
>gi|315125506|ref|YP_004067509.1| hypothetical protein PSM_A0403 [Pseudoalteromonas sp. SM9913]
gi|315014019|gb|ADT67357.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 184
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 61/185 (32%), Gaps = 25/185 (13%)
Query: 34 ATVTIVGWFLLSSWIRISTFSKSSIDL-LDFEPMIMKKF-------ILSDYSKDRV-KYS 84
I+ +S + + + +D+ E ++ K + Y++ +
Sbjct: 3 VARIILSVLFISCMVWLWYPYFTKVDITASEETQVIAKPDYTAIELKQTAYNEQGKVSHK 62
Query: 85 LVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSAR-FNLANHTLYISQPFK 143
+ A + G F + T+ +E + A A ++ + L +
Sbjct: 63 VTAVK--MELYQQLGFTFFEKPIFTL---YNEQQTWRINADEATLYD--DRQLVLEGNVT 115
Query: 144 MK------VKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
+ + D + +T +D+K +T+ S PV+IT + ++ + +
Sbjct: 116 AQNLVDNAMIDTINA--QTINVDIKLLTMQSQQPVVITGPNLKITGKGLEADLKTEVIKL 173
Query: 198 AGQVS 202
Sbjct: 174 INHTR 178
>gi|71908942|ref|YP_286529.1| hypothetical protein Daro_3330 [Dechloromonas aromatica RCB]
gi|71848563|gb|AAZ48059.1| Conserved hypothetical protein 2099 [Dechloromonas aromatica RCB]
Length = 1307
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 14/85 (16%)
Query: 114 RSEYGDMYLFAHSARFN---LANHTL-----------YISQPFKMKVKDNLRLDFETAVL 159
S G M + A +FN L ++ F+ D L D A L
Sbjct: 1122 PSLTGQMTVEAEKGQFNKLEPGVGKLLGLISLQSLPRRLTLDFRDIFSDGLAFDSIDAKL 1181
Query: 160 DVKNITINSSDPVIITHSDFVLSAN 184
++ + +++P+ I+ +
Sbjct: 1182 AIRKGVMRTTEPLRISGPAAQVEMQ 1206
>gi|237719209|ref|ZP_04549690.1| cation efflux system protein [Bacteroides sp. 2_2_4]
gi|229451588|gb|EEO57379.1| cation efflux system protein [Bacteroides sp. 2_2_4]
Length = 1441
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 19/157 (12%)
Query: 35 TVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYS-KDRVKYSLVAERAKTS 93
TV + L+ S + I LD M+ + + S + ++ S +AE+A
Sbjct: 540 TVIVAFSVLIGSLFLFTRLGAEFIPTLDEGDFAMQMTLPAGSSLTESIEVSRLAEKALMD 599
Query: 94 FNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRL- 152
+ + VPT D + I +PFK R
Sbjct: 600 KFPEIKHVVAKIGTAEVPTDPMAVED-------------ADVMIIMKPFKEWTSAGSRAE 646
Query: 153 ---DFETAVLDVKN-ITINSSDPVIITHSDFVLSANF 185
+ A+ + N S P+ + ++ + A
Sbjct: 647 MVDKMKDALAPLSERAEFNFSQPIQLRFNELMTGAKA 683
>gi|188588369|ref|YP_001921447.1| hypothetical protein CLH_2066 [Clostridium botulinum E3 str. Alaska
E43]
gi|188498650|gb|ACD51786.1| hypothetical protein CLH_2066 [Clostridium botulinum E3 str. Alaska
E43]
Length = 1417
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 53/174 (30%), Gaps = 22/174 (12%)
Query: 32 PFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSL----VA 87
P T + WIR + S + FE K LS + YS+
Sbjct: 690 PLPTGSTGLALKDDKWIRFVLPTDLSPNYPIFE----NKTTLSG--NPNLNYSIYIGYTE 743
Query: 88 ERAKTSFNSGKGII----FLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFK 143
+ + G I L+ + TVP G++ + + S
Sbjct: 744 LDDIKNVRNTSGNIYPLCDLKKIDATVPLIDLTKGNIEITSDSQLQYTYTDKT------T 797
Query: 144 MKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
+ KD F A D NS+ PV ++ L+ + R+ F
Sbjct: 798 ISGKDYHNEFFALAPADFTIKVSNSTIPV--PNAISPLNIKSLSLSEDGRTITF 849
>gi|206900433|ref|YP_002251685.1| hypothetical protein DICTH_1877 [Dictyoglomus thermophilum H-6-12]
gi|206739536|gb|ACI18594.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
Length = 215
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 32/113 (28%), Gaps = 4/113 (3%)
Query: 106 FELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDN----LRLDFETAVLDV 161
+TVP + + A ++ T + K R+ +
Sbjct: 12 IFITVPVLSQTKNPVKITAQKISYDYGKKTTRAEGNVVVIYKPGQEDETRITATLVFYNQ 71
Query: 162 KNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNPGVLQKKE 214
+ + V I+ D + +++ V++V+ K E
Sbjct: 72 DTNVVEAPGKVNISQKDLSIVGEDLKVDLKKEVLELKKNVNMVLQRKADNKVE 124
>gi|317477858|ref|ZP_07937044.1| glycosyl hydrolase family 3 N terminal domain-containing protein
[Bacteroides sp. 4_1_36]
gi|316905994|gb|EFV27762.1| glycosyl hydrolase family 3 N terminal domain-containing protein
[Bacteroides sp. 4_1_36]
Length = 774
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
++ MI++ Y L A A T ++ +G++ L++ +P
Sbjct: 320 NVKRILEMILQTPHFKGYKYSNKP-DLKAHAAVTRQSATEGMVLLKNDNGALPLAADVKN 378
Query: 119 DMYLFAHSARF-NLANHTLYISQPFKMKVKDNL 150
S F + +++ + + + D L
Sbjct: 379 VALFGCTSYDFIAGGTGSGNVNRAYTVSLLDGL 411
>gi|270294870|ref|ZP_06201071.1| glycoside hydrolase family 3 protein [Bacteroides sp. D20]
gi|270274117|gb|EFA19978.1| glycoside hydrolase family 3 protein [Bacteroides sp. D20]
Length = 774
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
++ MI++ Y L A A T ++ +G++ L++ +P
Sbjct: 320 NVKRILEMILQTPHFKGYKYSNKP-DLKAHAAVTRQSATEGMVLLKNDNGALPLAADVKN 378
Query: 119 DMYLFAHSARF-NLANHTLYISQPFKMKVKDNL 150
S F + +++ + + + D L
Sbjct: 379 VALFGCTSYDFIAGGTGSGNVNRAYTVSLLDGL 411
>gi|160888502|ref|ZP_02069505.1| hypothetical protein BACUNI_00919 [Bacteroides uniformis ATCC 8492]
gi|156861816|gb|EDO55247.1| hypothetical protein BACUNI_00919 [Bacteroides uniformis ATCC 8492]
Length = 775
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 59 DLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYG 118
++ MI++ Y L A A T ++ +G++ L++ +P
Sbjct: 320 NVKRILEMILQTPHFKGYKYSNKP-DLKAHAAVTRQSATEGMVLLKNDNGALPLAADVKN 378
Query: 119 DMYLFAHSARF-NLANHTLYISQPFKMKVKDNL 150
S F + +++ + + + D L
Sbjct: 379 VALFGCTSYDFIAGGTGSGNVNRAYTVSLLDGL 411
>gi|259418584|ref|ZP_05742501.1| organic solvent tolerance protein [Silicibacter sp. TrichCH4B]
gi|259344806|gb|EEW56660.1| organic solvent tolerance protein [Silicibacter sp. TrichCH4B]
Length = 733
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 117 YGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLD--VKNITINSSDPV 172
GD+ L A+ ++ L + P ++ ++ + A LD ++N + + V
Sbjct: 73 QGDIRLQANRITYDRQTGVLNMEGPIRIDQSGSITVLANAAELDSGLRNGILRGARMV 130
>gi|78189205|ref|YP_379543.1| VCBS [Chlorobium chlorochromatii CaD3]
gi|78171404|gb|ABB28500.1| VCBS [Chlorobium chlorochromatii CaD3]
Length = 2461
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 17/108 (15%)
Query: 104 QDFELTVPTQRSEYGDMYLFAHSARF-----NLANHTLYI---SQPFKMKVKDNLRLDFE 155
V YG + + + + + + + L S F + D +
Sbjct: 1716 DTITYGVVNGTGTYGTLTVDSSTGVYRYDGNDNTINALNAGTWSDTFTVTASDGTISESA 1775
Query: 156 TAVLDVKNITINSSDP-VIITHSDFV----LSANFARIENSSRSAVFA 198
T V+ + +P V I +SA+ + +S F
Sbjct: 1776 TVVITIHGAN---DNPTVSINDDSLSFTEDVSASAQDLTDSGS-ITFD 1819
>gi|56459510|ref|YP_154791.1| hypothetical protein IL0399 [Idiomarina loihiensis L2TR]
gi|56178520|gb|AAV81242.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
L2TR]
Length = 187
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 61/194 (31%), Gaps = 15/194 (7%)
Query: 21 VRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDR 80
R + + F ++ W R + + M ++
Sbjct: 2 SRRVTVILILL-FGAGLLLVW-------RPFSDDADGNNAATTRTMQPDFTAFGLETRIF 53
Query: 81 VKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMY--LFAHSARFNLANHTLYI 138
L+A + K+ S I L + + V T SE G+ + A F + TL +
Sbjct: 54 ESDGLLAHKIKSEKMSHYNQIGLTELKRPVYTVFSEQGEELWEVSAAQGTF-YDDQTLIL 112
Query: 139 SQPFKMKV--KDNLRLDFETAVL--DVKNITINSSDPVIITHSDFVLSANFARIENSSRS 194
++ D T L D+KN ++++ PV I ++ N + +
Sbjct: 113 EHDVEILALEPDTHIEQVLTEYLIVDLKNESMSTEHPVSIHGPRLLIRGNGMTADLKAER 172
Query: 195 AVFAGQVSVVVNPG 208
V + P
Sbjct: 173 MELKRHVKTIFQPA 186
>gi|255072339|ref|XP_002499844.1| alpha-2 macroglobulin family-like protein [Micromonas sp. RCC299]
gi|226515106|gb|ACO61102.1| alpha-2 macroglobulin family-like protein [Micromonas sp. RCC299]
Length = 1594
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 19/166 (11%)
Query: 28 KFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVA 87
K I ++ + + I + +++ + K + S A
Sbjct: 6 KTLVVVFATAIFALAPAVGAVQPLVLAPAKITVGATVGLLVNGAATAGGLKADLMDS--A 63
Query: 88 ERAKTSFNSGKGIIFLQDFELTVPTQ-RSEYGDMYLFAHSARFNLANHTLYISQPFKMKV 146
++ S + G Q +L VP+ + ++ SA T + + +
Sbjct: 64 DKVIASVTAPPGSGDAQTVQLAVPSSAPPGSARIKIYKTSA-----PATAFATHAVTLI- 117
Query: 147 KDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSS 192
+ +DV + I + PV + + +
Sbjct: 118 --------KAENMDVSALIIETDKPV--YKPGQTVQVRVLSLTSKG 153
>gi|307726207|ref|YP_003909420.1| hypothetical protein BC1003_4193 [Burkholderia sp. CCGE1003]
gi|307586732|gb|ADN60129.1| hypothetical protein BC1003_4193 [Burkholderia sp. CCGE1003]
Length = 226
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 141 PFKMKVKDNL-RLDFETAVLD--VKNITINSSDPVIITHSDFVLSANFARIENSSRSAVF 197
P+ + +D + F +A ++ +K + + P+ I S F L+ R+++ A+
Sbjct: 68 PWTVSEEDGTEDVLFLSAHVNATLKIGQLKKTSPLKINVSKFHLTVRRKRVQD----AIH 123
Query: 198 AGQVSVVVNPGVLQ 211
V+V V P +
Sbjct: 124 ESGVTVDVGPESIH 137
>gi|160886604|ref|ZP_02067607.1| hypothetical protein BACOVA_04615 [Bacteroides ovatus ATCC 8483]
gi|156107015|gb|EDO08760.1| hypothetical protein BACOVA_04615 [Bacteroides ovatus ATCC 8483]
Length = 1441
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 19/157 (12%)
Query: 35 TVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYS-KDRVKYSLVAERAKTS 93
TV I L+ S + I LD M+ + + S + ++ S +AE+A
Sbjct: 540 TVIIAFSALIGSLFLFTRLGAEFIPTLDEGDFAMQMTLPAGSSLTESIEVSRLAEKALMD 599
Query: 94 FNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRL- 152
+ + VPT D + I +PFK R
Sbjct: 600 KFPEIKHVVAKIGTAEVPTDPMAVED-------------ADVMIIMKPFKEWTSAGSRAE 646
Query: 153 ---DFETAVLDVKN-ITINSSDPVIITHSDFVLSANF 185
+ A+ + N S P+ + ++ + A
Sbjct: 647 MVDKMKDALAPLSERAEFNFSQPIQLRFNELMTGAKA 683
>gi|85706340|ref|ZP_01037434.1| organic solvent tolerance protein, putative [Roseovarius sp. 217]
gi|85669113|gb|EAQ23980.1| organic solvent tolerance protein, putative [Roseovarius sp. 217]
Length = 723
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVL--DVKNITINSSDPVIITHSD 178
L A ++ A L I P + D + ++A L D+ N + + V
Sbjct: 58 RLKAREIVYDRATERLVIKGPLTLTDVDGSVVLADSAELDRDLTNGILRGARIV--MQDQ 115
Query: 179 FVLSANFARIEN 190
L+A R +
Sbjct: 116 LQLAAVEMRRTD 127
>gi|293372295|ref|ZP_06618680.1| heavy metal efflux pump, CzcA family [Bacteroides ovatus SD CMC 3f]
gi|292632737|gb|EFF51330.1| heavy metal efflux pump, CzcA family [Bacteroides ovatus SD CMC 3f]
Length = 1139
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 19/157 (12%)
Query: 35 TVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYS-KDRVKYSLVAERAKTS 93
TV I L+ S + I LD M+ + + S + ++ S +AE+A
Sbjct: 540 TVIIAFSALIGSLFLFTRLGAEFIPTLDEGDFAMQMTLPAGSSLTESIEVSRLAEKALMD 599
Query: 94 FNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRL- 152
+ + VPT D + I +PFK R
Sbjct: 600 KFPEIKHVVAKIGTAEVPTDPMAVED-------------ADVMIIMKPFKEWTSAGSRAE 646
Query: 153 ---DFETAVLDVKN-ITINSSDPVIITHSDFVLSANF 185
+ A+ + N S P+ + ++ + A
Sbjct: 647 MVDKMKDALAPLSERAEFNFSQPIQLRFNELMTGAKA 683
>gi|297569294|ref|YP_003690638.1| protein of unknown function DUF1239 [Desulfurivibrio alkaliphilus
AHT2]
gi|296925209|gb|ADH86019.1| protein of unknown function DUF1239 [Desulfurivibrio alkaliphilus
AHT2]
Length = 191
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 4/97 (4%)
Query: 93 SFNSGKGI--IFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNL 150
SG G FL E R E +++ A R++ A L + ++ D
Sbjct: 77 DLRSGAGGEGFFLTGVEAVF--FRDEAEQVWIDADHGRYDQALAVLELEDNVRLLDADGF 134
Query: 151 RLDFETAVLDVKNITINSSDPVIITHSDFVLSANFAR 187
L + + ++S V I+ +
Sbjct: 135 SLRTQALNYYEREGRVSSRVGVEISGDEVSARGQSLD 171
>gi|319940821|ref|ZP_08015160.1| hypothetical protein HMPREF9464_00379 [Sutterella wadsworthensis
3_1_45B]
gi|319805703|gb|EFW02484.1| hypothetical protein HMPREF9464_00379 [Sutterella wadsworthensis
3_1_45B]
Length = 230
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 63/203 (31%), Gaps = 16/203 (7%)
Query: 25 QFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIM------KKFILSDYSK 78
+ + + ++ + L + P M + L+D++
Sbjct: 4 RRMIIRERLTAIIGSAILFALVATSYWYSIQTQVAGLKYVPSEMSPDFLARNVSLTDFTP 63
Query: 79 DRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYI 138
+ L F+ + + + + V + + A N T+ +
Sbjct: 64 EGTPKLLAYADDVQHFSDER--MRAERIQ--VISLDPNSAPAFAQADEGWSNDGLETIDL 119
Query: 139 SQPFKM---KVKDNLRLDFETAVLD--VKNITINSSDPVIITHSDFVLSANFARIENS-S 192
+ + + +D + F T L + + PV IT S+ + ++ +
Sbjct: 120 TGHVLVHRRQYQDQPPMTFTTEHLTGWLDTQRFKTDSPVKITRGADETSSQNGLLYDNVT 179
Query: 193 RSAVFAGQVSVVVNPGVLQKKEN 215
R G V V +P +K ++
Sbjct: 180 RVLELYGGVESVFHPQSFRKADS 202
>gi|163745595|ref|ZP_02152955.1| hypothetical protein OIHEL45_08390 [Oceanibulbus indolifex HEL-45]
gi|161382413|gb|EDQ06822.1| hypothetical protein OIHEL45_08390 [Oceanibulbus indolifex HEL-45]
Length = 871
Score = 35.8 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 106 FELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNIT 165
E T P+ S + + A S NL L + D + ++ D +
Sbjct: 150 IEATAPSTASGSDTITVTATS---NLDGTVLITNTDTLTISNDAIIELVKSMTADPASGG 206
Query: 166 ----INSSDPVIIT---HSDFVLSANFARIEN--SSRSAVFAGQVS 202
I++ D V IT S +++AN +++ R A G
Sbjct: 207 NPNIIDAGDEVTITLTYSSTGLVAANNYSVQDVLDGRLAYVEGSAR 252
>gi|256821876|ref|YP_003145839.1| hypothetical protein Kkor_0651 [Kangiella koreensis DSM 16069]
gi|256795415|gb|ACV26071.1| protein of unknown function DUF1239 [Kangiella koreensis DSM 16069]
Length = 185
Score = 35.8 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 57/173 (32%), Gaps = 12/173 (6%)
Query: 36 VTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFN 95
+ + + W R + +++ + ++ K R+ T+
Sbjct: 13 LVPATFAIAYWWDRSTEPKPDFVEISSNPDYYLSNTETIEFDKSGQP-----LRSFTTVK 67
Query: 96 S--GKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKV-----KD 148
+ K I+ + + + + + A N + L + +++ +
Sbjct: 68 TLHYKDIMQTHLEQPVMRFNDDQNPSWTVSSKKAISNELSEQLILEGNVTVELERQPAQS 127
Query: 149 NLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQV 201
N+ L +D + T + P+ + F ++A + + + + F +V
Sbjct: 128 NVLLTMPVLKIDFASETAFTDAPIELIDGRFRMTAKGMQADLRTNNIEFKSEV 180
>gi|299148280|ref|ZP_07041342.1| cation efflux system protein CzcA [Bacteroides sp. 3_1_23]
gi|298513041|gb|EFI36928.1| cation efflux system protein CzcA [Bacteroides sp. 3_1_23]
Length = 1441
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 19/157 (12%)
Query: 35 TVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYS-KDRVKYSLVAERAKTS 93
TV I L+ S + I LD M+ + + S + ++ S +AE+A
Sbjct: 540 TVIIAFSALIGSLFLFTRLGAEFIPTLDEGDFAMQMTLPAGSSLTESIEVSRLAEKALMD 599
Query: 94 FNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRL- 152
+ + VPT D + I +PFK R
Sbjct: 600 KFPEIKHVVAKIGTAEVPTDPMAVED-------------ADVMIIMKPFKEWTSAGNRAE 646
Query: 153 ---DFETAVLDVKN-ITINSSDPVIITHSDFVLSANF 185
+ A+ + N S P+ + ++ + A
Sbjct: 647 MVDKMKDALAPLSERAEFNFSQPIQLRFNELMTGAKA 683
>gi|110634110|ref|YP_674318.1| organic solvent tolerance protein [Mesorhizobium sp. BNC1]
gi|110285094|gb|ABG63153.1| Organic solvent tolerance protein [Chelativorans sp. BNC1]
Length = 786
Score = 35.8 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 6/105 (5%)
Query: 105 DFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVL--DVK 162
Q EYG + A ++ + + S ++ +D R E L D+
Sbjct: 68 TITAVGGVQI-EYGGYRVVAQRVTYDRSTSRVIGSGNVEIIDQDGNRFHAEEVDLTDDLG 126
Query: 163 NITINSSDPVIITHSDFVLSANFARIENSSRSAVFAGQVSVVVNP 207
+ + + D + + R F V P
Sbjct: 127 EGFVR---ALRVETVDRTYFGAESAVREGGRLTTFNKGVYTACEP 168
>gi|271498936|ref|YP_003331961.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Dickeya dadantii Ech586]
gi|270342491|gb|ACZ75256.1| anaerobic ribonucleoside-triphosphate reductase activating protein
[Dickeya dadantii Ech586]
Length = 154
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVI 173
+N + L PF +++D + D + L ++ ++++ DP+
Sbjct: 32 GCYNQSTWRLNSGHPFTQEMEDRIIADLQNTNLPLQGLSLSGGDPLH 78
>gi|256027951|ref|ZP_05441785.1| S-layer protein [Fusobacterium sp. D11]
Length = 901
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKD-NLRL---DFETAVLDVKNITINSSDPVIITHS 177
+ A +FN L ++P K ++ + + F+T + I D V+I +
Sbjct: 108 IKASELKFNKETKELVSTKPMYAKNEEKGVEILANKFKTT---ISMDNITLEDGVVIKNK 164
Query: 178 DFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A +N+++ G + +
Sbjct: 165 LFSILADKANYDNNTKIITLEGNIKL 190
>gi|260494137|ref|ZP_05814268.1| S-layer protein [Fusobacterium sp. 3_1_33]
gi|260198283|gb|EEW95799.1| S-layer protein [Fusobacterium sp. 3_1_33]
Length = 901
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKD-NLRL---DFETAVLDVKNITINSSDPVIITHS 177
+ A +FN L ++P K ++ + + F+T + I D V+I +
Sbjct: 108 IKASELKFNKETKELVSTKPMYAKNEEKGVEILANKFKTT---ISMDNITLEDGVVIKNK 164
Query: 178 DFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A +N+++ G + +
Sbjct: 165 LFSILADKANYDNNTKIITLEGNIKL 190
>gi|89054303|ref|YP_509754.1| organic solvent tolerance protein, putative [Jannaschia sp. CCS1]
gi|88863852|gb|ABD54729.1| organic solvent tolerance protein putative [Jannaschia sp. CCS1]
Length = 715
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 34/108 (31%), Gaps = 19/108 (17%)
Query: 118 GDMYLFAHSARFNLANHTLYISQPFKMKVKDN---LRLDFETAVLDVKNITINSSDPV-- 172
G L A S ++ L + P + + +F D++ + S+ V
Sbjct: 57 GGARLRAESITYDGTADNLRVQGPLTLVDETGSTVFIAEFAELSADLQEGVLQSARLVLD 116
Query: 173 --------IITHSDF------VLSANFARIENSSRSAVFAGQVSVVVN 206
IT ++ A+ + + ++ + V++
Sbjct: 117 RQLQIAATEITRTEGRYTQIYQAVASSCEVCFDHPTPLWEIRARRVIH 164
>gi|154413189|ref|XP_001579625.1| B-box zinc finger family protein [Trichomonas vaginalis G3]
gi|121913834|gb|EAY18639.1| B-box zinc finger family protein [Trichomonas vaginalis G3]
Length = 762
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 9/97 (9%)
Query: 102 FLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDV 161
+ D + G + F++ + + ++ V L+F++A D+
Sbjct: 73 TISDIAAKGIIVNPQTGFRFKV---GTFDIDREQ-EMIEVIRITVALGNTLNFQSASSDL 128
Query: 162 KNITINSSDPVI-ITHSDFVLSANFARIENSSRSAVF 197
KN P + + + + + S VF
Sbjct: 129 KNYEFAQDQPTSGVLRAGYH----SLCVSDKSEYVVF 161
>gi|307721698|ref|YP_003892838.1| Organic solvent tolerance protein [Sulfurimonas autotrophica DSM
16294]
gi|306979791|gb|ADN09826.1| Organic solvent tolerance protein [Sulfurimonas autotrophica DSM
16294]
Length = 730
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 21/115 (18%)
Query: 83 YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF 142
YS + ++K + + G + + Y D +L A A ++ L +
Sbjct: 25 YS-SSVKSKDNIVNASGGVTV------------VYQDYFLTADRAVYDRDTQDLELFGHV 71
Query: 143 KMKVKDNLRLDFETAVLDVKNIT--------INSSDPVIITHSDFVLSANFARIE 189
++ N ++ + A L++ +++ V I+ ++ A I
Sbjct: 72 RLNHNKNYKILGKYAKLNLAKKERYFKPLYLLDTKSDVWISANEGEAKAEMLDIT 126
>gi|254437302|ref|ZP_05050796.1| ABC transporter, permease protein, putative [Octadecabacter
antarcticus 307]
gi|198252748|gb|EDY77062.1| ABC transporter, permease protein, putative [Octadecabacter
antarcticus 307]
Length = 278
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 21/59 (35%)
Query: 25 QFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKY 83
+F K +P + F + + T K+ D + E + L +Y+ Y
Sbjct: 9 RFSKIAWPTVAWIVALIFFFPIFYMVLTSFKTDADAVKPEFLFSFTPTLENYANMTENY 67
>gi|331221112|ref|XP_003323231.1| hypothetical protein PGTG_04768 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302221|gb|EFP78812.1| hypothetical protein PGTG_04768 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 813
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 38/169 (22%), Gaps = 18/169 (10%)
Query: 28 KFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVA 87
K + F + S + + L+ E I L Y R +
Sbjct: 20 KILLKCLAIIGSCAFFVES-----SPAMPQNPGLEIESTITAFPQLQGYKDCRRIGGGSS 74
Query: 88 ERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF-KMKV 146
++ SG G LQ T+PT + + L P ++
Sbjct: 75 HQSHQPITSGLGNFKLQKNTETMPTASDDSSPDF---------RGKEILESEPPIPTIRS 125
Query: 147 KDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIENSSRSA 195
+ + + + I +
Sbjct: 126 SVGVAGGLQDSKSQIHTGDGFGHQAHSPASPPHH---QAKEITEDGETI 171
>gi|126736393|ref|ZP_01752135.1| organic solvent tolerance protein, putative [Roseobacter sp. CCS2]
gi|126714214|gb|EBA11083.1| organic solvent tolerance protein, putative [Roseobacter sp. CCS2]
Length = 699
Score = 35.4 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 121 YLFAHSARFNLANHTLYISQPFKMKVKDNLRLDFETAVLD--VKNITINSSDPVIITHSD 178
L A ++ + TL + P ++ D L +A LD ++N + S+ V+
Sbjct: 51 RLTASQITYDQPSDTLRVVGPIVIQASDGTILTASSATLDPRLENGILQSARIVLDQQ-- 108
Query: 179 FVLSANFARIENS 191
L+AN +
Sbjct: 109 LQLAANQIDQRDG 121
>gi|121611884|ref|YP_999691.1| outer membrane protein [Verminephrobacter eiseniae EF01-2]
gi|121556524|gb|ABM60673.1| outer membrane protein [Verminephrobacter eiseniae EF01-2]
Length = 763
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 24/152 (15%)
Query: 44 LSSWIRISTFSKSSIDLLDFEPMIMK-KFILSDYSKDRVKYSLVAERAKTSFNSGKGIIF 102
S +I S + S D + ++ S + V S + G+
Sbjct: 263 ASPYITFSPKAPVSADGGRTWTITYHASPHVAGDSTNTV-----------SIRNLDGVRD 311
Query: 103 LQDFELTVPTQRSEYGDMYLFA-----HSARFNLANHTLYISQPFKMKVKDNLRLDFETA 157
L VP + + + A SA F+ A T + + +++ DF A
Sbjct: 312 LAG-NAAVPNSSASTDNYEVDAVDPHPTSATFDKARLTAGETATVTVTFNESVS-DFTEA 369
Query: 158 VLDVKNITINSSDPV-----IITHSDFVLSAN 184
+ + N +++ PV I + F +A+
Sbjct: 370 AIQIANGSVSDLTPVAGSDNRIWTATFTPTAD 401
>gi|307129133|ref|YP_003881149.1| anaerobic ribonucleotide reductase activating protein [Dickeya
dadantii 3937]
gi|306526662|gb|ADM96592.1| anaerobic ribonucleotide reductase activating protein [Dickeya
dadantii 3937]
Length = 154
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 23/47 (48%)
Query: 127 ARFNLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVI 173
+N + + PF +++D + D + + ++ ++++ DP+
Sbjct: 32 GCYNQSTWRVNSGHPFTQEMEDRIIADLQNTDIPLQGLSLSGGDPLH 78
>gi|319940801|ref|ZP_08015140.1| hypothetical protein HMPREF9464_00359 [Sutterella wadsworthensis
3_1_45B]
gi|319805683|gb|EFW02464.1| hypothetical protein HMPREF9464_00359 [Sutterella wadsworthensis
3_1_45B]
Length = 728
Score = 35.0 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Query: 85 LVAERA-KTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFK 143
L A A ++ + G + L LT+P S + + N TL + F
Sbjct: 160 LSALDAEFSNLSETGGTVRLAG-TLTLPQAPSISAALVSEGSAQTLNGLTGTLTFTGVFT 218
Query: 144 MKVKDNLRLDFETAVLDVKNITIN 167
+ L L A D + ++N
Sbjct: 219 FDAQKGLVLQMPAATFDGISGSMN 242
>gi|118602138|ref|YP_903353.1| hypothetical protein Rmag_0083 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567077|gb|ABL01882.1| protein of unknown function DUF1239 [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 320
Score = 35.0 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 38/139 (27%), Gaps = 6/139 (4%)
Query: 68 MKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSA 127
+ F L ++ V ++ SF + ++ E V Y+
Sbjct: 61 IHNFSLQEFDAKVQLSHFVKAKSYFSFKNSPALL----IEPEVIFYDENGLKDYVLKSKC 116
Query: 128 RFNLANHTLYISQPFKMKVKDNLRLDFETAVL--DVKNITINSSDPVIITHSDFVLSANF 185
+ ++ + L T L +K + S V + + A
Sbjct: 117 AHYTDRGEIKFKGEVSIQSSNGLSHKVNTEELLVGIKTSDLISKKQVTYLGKNVKIIAQG 176
Query: 186 ARIENSSRSAVFAGQVSVV 204
R+ + G+ +
Sbjct: 177 MRMYAKDDTMRLIGRTKIN 195
>gi|158523218|ref|YP_001531088.1| organic solvent tolerance protein [Desulfococcus oleovorans Hxd3]
gi|158512044|gb|ABW69011.1| Organic solvent tolerance protein [Desulfococcus oleovorans Hxd3]
Length = 799
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 6/81 (7%)
Query: 130 NLANHTLYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARIE 189
+ A + ++ + A L + V IT + A+ +
Sbjct: 59 DTAGDLFRMDPKSAWRIDAGAITYDKQADLYLAVGK------VTITKEGKRIVADSIWFD 112
Query: 190 NSSRSAVFAGQVSVVVNPGVL 210
++ G V++ P VL
Sbjct: 113 QKNQRLFADGNVTMTAGPDVL 133
>gi|258645772|ref|ZP_05733241.1| conserved hypothetical protein [Dialister invisus DSM 15470]
gi|260403143|gb|EEW96690.1| conserved hypothetical protein [Dialister invisus DSM 15470]
Length = 181
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Query: 94 FNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDNLRLD 153
S + +L D E +E + A A T+ + + K KD L L
Sbjct: 68 MESNRNTAYLTDIEGFFAEDGNELS---IKAKKGIIKRAEQTVNLEGDIEGKTKDGLILY 124
Query: 154 FETAVLDVKNITINSSDPVIITHSDFVLSANF 185
+ D K +++ +L+A+
Sbjct: 125 AKNLTYDGKKQVLSTDCSFTAEKDGRILTADS 156
>gi|56695009|ref|YP_165355.1| hypothetical protein SPO0081 [Ruegeria pomeroyi DSS-3]
gi|56676746|gb|AAV93412.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 202
Score = 34.6 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 22/198 (11%), Positives = 56/198 (28%), Gaps = 12/198 (6%)
Query: 20 HVRFIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMI----MKKFILSD 75
+ R +Q+LK P + ++ L S + + + + +
Sbjct: 6 YSRVVQYLKVLLPLTALGLLSAVFLLSSRGTDSVAPIPFAEDEIADRTRGQQITGPFFTA 65
Query: 76 YSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHT 135
+ + + A A+ + D + + + L + L
Sbjct: 66 VTPKGEQIQVQATLARPGGENAPAEAT--DLIAELLLLGGK--RIRLTSDLGTVQLDKDL 121
Query: 136 LYISQPFKMKVKDNLRLDFETAVLDVKNITINSSDPVIITHSDFVLSANFARI----ENS 191
+ + D L + + + I+ + V T +A ++ E+
Sbjct: 122 AIFTGNVVITTSDGLTVTTDQLNAGLSGISGETPGNVRGTGPIGEFTAGSMQMGAENEDG 181
Query: 192 SRSAVFAGQVSVVVNPGV 209
F V ++ +P
Sbjct: 182 PIHIRFKNGVKLLYDPKA 199
>gi|331703751|ref|YP_004400438.1| ISMmy1 like B transposase [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802306|emb|CBW54460.1| ISMmy1 like B transposase [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 470
Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 12/137 (8%)
Query: 67 IMKKFILSDYSKDRVKYSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHS 126
++ +L D + YS ++ +++T + +I+ D + P S Y L +
Sbjct: 172 VVVDGMLKDNTSKTNIYSEMSRKSRTKGSQNFNLIYAYDVDSEEPIASSIYPGNMLDYTA 231
Query: 127 -----ARFNLANHTLYISQPF-----KMKVKDNLRLDFETAVLD--VKNITINSSDPVII 174
+N+ L + + F K ++ LD VK + + +
Sbjct: 232 FKDFLKTYNMKKGLLILDKGFNDKECKELMQQKNISYLIPIKLDFAVKKLNLKTGFKTSF 291
Query: 175 THSDFVLSANFARIENS 191
++ + + A + +
Sbjct: 292 SYDEDTIRAKKMNVNDK 308
>gi|167585438|ref|ZP_02377826.1| hypothetical protein BuboB_08884 [Burkholderia ubonensis Bu]
Length = 204
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 39/132 (29%), Gaps = 10/132 (7%)
Query: 83 YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPF 142
Y L A + ++ + P + A N + +
Sbjct: 66 YRLTAAKLIHYEDTESSDLTTPAMRAFQP----GKPVVTTTAKRGTVNGDVSIVDLYDDA 121
Query: 143 KMKVKDN-----LRLDFETAVLDVKNITINSSDPVIITHSDFVLSA-NFARIENSSRSAV 196
++ ++ D + + V + I + PV + +++A + + N +R
Sbjct: 122 RILRAAGGGDPQMQADSQHFRIFVNDDVIQTEKPVKLQRGLSLVNATDGMKYNNVTRVIE 181
Query: 197 FAGQVSVVVNPG 208
G V +
Sbjct: 182 LYGNVRGTIAAS 193
>gi|254303690|ref|ZP_04971048.1| hypothetical protein FNP_1349 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323882|gb|EDK89132.1| hypothetical protein FNP_1349 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 901
Score = 34.6 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKDN----LRLDFETAVLDVKNITINSSDPVIITHS 177
+ A ++N L ++P K ++ L F+T + + NIT+ D V+I +
Sbjct: 108 IKASELKYNKTTQELISTKPMYAKNEEKGVEVLANKFKTT-ITMDNITL--EDGVVIKNK 164
Query: 178 DFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A N++++ V G + +
Sbjct: 165 LFSILADKANYNNANKTIVLEGNIRL 190
>gi|254414897|ref|ZP_05028661.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196178386|gb|EDX73386.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 380
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 114 RSEYGDMYLFAHSARFNLANHTLYISQPFKMKVKDN-LRLDFETAVLDVKNITINSSDPV 172
+ + A+ +NL + + ++ D + + A+ DVK T+ S+ PV
Sbjct: 218 KDNTVTDRVVANQTDYNLKTKVAILKKDVQLTSIDPPILISSNEAIWDVKAETVRSNQPV 277
Query: 173 IITHSD--FVLSANFARIENSSRSAVFAGQVS 202
I H + V++AN +++ S A G V
Sbjct: 278 QIVHQEEKVVITANQGQVDLESEVANLKGGVQ 309
>gi|114328328|ref|YP_745485.1| hemolysin activator protein [Granulibacter bethesdensis CGDNIH1]
gi|114316502|gb|ABI62562.1| hemolysin activator protein precursor [Granulibacter bethesdensis
CGDNIH1]
Length = 585
Score = 34.6 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 14/167 (8%)
Query: 40 GWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVKYSLVAERAKTSFNSGKG 99
FL S++ + + + + + + ++ + + + + ER G
Sbjct: 17 AVFLAMSFLSVYSTNTQAQIVQNGSSQLISNTL----DQQQRGRAQDRERELQRIAPPDG 72
Query: 100 IIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANHTLYISQPFK-----MKVKDNLRLDF 154
+ L+ VP+ + + A ++ PF + D L F
Sbjct: 73 DVELRVPSAAVPSGGNCIQVSRIEVKGADHLPPWQQQALAAPFTQKCLSLVELDKLINAF 132
Query: 155 ETAVLDVKNITINSSDP-VIITHSDFVLSANFARIENSSRSAVFAGQ 200
A +D +T + P ++ + A +E S +F GQ
Sbjct: 133 NKAYIDSGFVTSRAYLPQQDLSSGTVRIVA----VEGQVNSFIFKGQ 175
>gi|294783333|ref|ZP_06748657.1| S-layer protein [Fusobacterium sp. 1_1_41FAA]
gi|294480211|gb|EFG27988.1| S-layer protein [Fusobacterium sp. 1_1_41FAA]
Length = 903
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 122 LFAHSARFNLANHTLYISQPFKMKVKD-NLRL---DFETAVLDVKNITINSSDPVIITHS 177
+ A ++N L ++P K ++ + + F+T + I D V+I +
Sbjct: 108 IKASQLKYNKETQVLESTKPMYAKNEEKGIEVLGNKFKTT---ISMDNITLEDGVVIKNK 164
Query: 178 DFVLSANFARIENSSRSAVFAGQVSV 203
F + A+ A N +++ G +++
Sbjct: 165 LFSIVADKANYNNEAKTITLEGNIAL 190
>gi|269792855|ref|YP_003317759.1| hypothetical protein Taci_1246 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100490|gb|ACZ19477.1| hypothetical protein Taci_1246 [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 184
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 23/193 (11%)
Query: 23 FIQFLKFFFPFATVTIVGWFLLSSWIRISTFSKSSIDLLDFEPMIMKKFILSDYSKDRVK 82
I +K P A + VG F L + + +K + L + + + D + +
Sbjct: 4 RIGRMKILLPLAALLAVGAFFLYRDLSLPERAKEAGTLRSLPDVEAQGLSI-DRTIKGER 62
Query: 83 YSLVAERAKTSFNSGKGIIFLQDFELTVPTQRSEYGDMYLFAHSARFNLANH---TLYIS 139
+ + A+RA G + + DF + + S M L A ++ TL S
Sbjct: 63 WLMEAQRA----EKSGGTVRVWDFRVRR-SSPSGRPVMELTAREGLYDEDGTFVKTLDFS 117
Query: 140 QPFKMKVKDNLRLDFETAV------LDVKNITINSSDPVIITHSDFVLSANFARIENSSR 193
F+ +D + E D+ V ++ F + I R
Sbjct: 118 GTFRSAGRDYVCSGGEAVYHVDQDRWDLARG-------VKVSRDGFTAQGDGGVIHRDGR 170
Query: 194 SAVFAGQVSVVVN 206
G + V +
Sbjct: 171 -ISLRGGIRVTLE 182
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.310 0.140 0.367
Lambda K H
0.267 0.0430 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,685,787,268
Number of Sequences: 14124377
Number of extensions: 133090104
Number of successful extensions: 506068
Number of sequences better than 10.0: 356
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 505397
Number of HSP's gapped (non-prelim): 468
length of query: 215
length of database: 4,842,793,630
effective HSP length: 133
effective length of query: 82
effective length of database: 2,964,251,489
effective search space: 243068622098
effective search space used: 243068622098
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.7 bits)
S2: 78 (34.6 bits)