HHsearch alignment for GI: 254780747 and conserved domain: PRK10949
>PRK10949 protease 4; Provisional.
Probab=100.00 E-value=0 Score=397.17 Aligned_cols=231 Identities=29% Similarity=0.448 Sum_probs=213.8
Q ss_pred CCCCCCEEEEEEEEEEECC---------HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCCEE
Q ss_conf 5677872899997666238---------699999999986189987999975888888899999999999841-478679
Q gi|254780747|r 31 VEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVI 100 (293)
Q Consensus 31 ~~~~~~~i~~i~i~G~I~~---------~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k-~~kpvv 100 (293)
T Consensus 321 ~~~~~~~IAVI~a~G~Iv~G~~~~g~ig~dt~~~~lr~a~~D~~VKAvVLRVnSPGGSa~ASE~I~~el~~lk~~gKPVV 400 (618)
T PRK10949 321 PADTGGQIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVV 400 (618)
T ss_pred CCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 88779838999968768548887886655899999999730867228999985899866789999999999984499799
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 96033233223210001110001301353455565302102456777420422553155211234666789999887777
Q gi|254780747|r 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 (293)
Q Consensus 101 a~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~ 180 (293)
T Consensus 401 vSMG~vAASGGYwIa~~Ad~I~A~p~TITGSIGVfg~~p~~~~~l~~lGI~~D~V~t~~~a~~-s~~~~l~~~~~~~~q~ 479 (618)
T PRK10949 401 VSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEFQQMMQL 479 (618)
T ss_pred EEECCCCCCCCEEEECCCCEEEECCCCEEEECEEEEEHHHHHHHHHHCCCEEEEEECCCCCCC-CCCCCCCHHHHHHHHH
T ss_conf 997010156625885168769988986788640477610499999964952468854567778-8777999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHH
Q ss_conf 76666677899998514999889988734982378899877980623898999999997418776530120144211245
Q gi|254780747|r 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 (293)
Q Consensus 181 ~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 260 (293)
T Consensus 480 ~i~~~Y~~Fl~~Va~gR~mt~e~Vd~iAqGRVWsG~~A~~~GLVD~LGgl~dAI~~Aa~lA~l~~-y~v~~~~~~~s~~e 558 (618)
T PRK10949 480 SIENGYKRFITLVADARHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHLNWYVDEPTFFD 558 (618)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEEECCCCCHHH
T ss_conf 99999999999998657999899998648837769999986893654999999999999749985-06786179999999
Q ss_pred HHH
Q ss_conf 565
Q gi|254780747|r 261 CDL 263 (293)
Q Consensus 261 ~~~ 263 (293)
T Consensus 559 ~~~ 561 (618)
T PRK10949 559 MVM 561 (618)
T ss_pred HHH
T ss_conf 999