HHsearch alignment for GI: 254780747 and conserved domain: PRK11423

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional.
Probab=98.99  E-value=1e-08  Score=74.74  Aligned_cols=159  Identities=17%  Similarity=0.230  Sum_probs=104.7

Q ss_pred             CCEEEEEEEEEEEC-C------HHHHHHHHHHHHCCCCCCEEEEECC------CCCCCHHH-----------HHHHHHHH
Q ss_conf             87289999766623-8------6999999999861899879999758------88888899-----------99999999
Q gi|254780747|r   35 SPHVARIAIRGQIE-D------SQELIERIERISRDDSATALIVSLS------SPGGSAYA-----------GEAIFRAI   90 (293)
Q Consensus        35 ~~~i~~i~i~G~I~-~------~~~l~~~l~~a~~d~~ik~ivL~i~------SpGG~~~~-----------~~~i~~ai   90 (293)
T Consensus        11 ~d~Va~itlnrP~~~Nal~~~m~~~l~~al~~~~~-~~~r~vvl~~~~g~~~F~AG~Dl~e~~~~~~~~~~~~~~~~~~~   89 (261)
T PRK11423         11 INKIATITFNNPAKRNALSKVLIDDLMQALSDLNR-PEIRVVILRAPSGSKVWSAGHDIHELPAGGRDPLSYDDPLRQIL   89 (261)
T ss_pred             ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             99999999748687799899999999999999857-99879999658887542378665453225766677877999999


Q ss_pred             HHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf             9841-478679960332332232100011100013013534555653021024567774204225531552112346667
Q gi|254780747|r   91 QKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE  169 (293)
Q Consensus        91 ~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~  169 (293)
T Consensus        90 ~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~------------~~~Gl~~~----------------  141 (261)
T PRK11423         90 RMIQKFPKPVIAMVEGSVWGGAFDLVMSCDLIIAASTSTFAMTP------------ANLGVPYN----------------  141 (261)
T ss_pred             HHHHHCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEECCC------------HHCCCCCC----------------
T ss_conf             99994899899996773321408999987542101162695762------------00277768----------------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             89999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r  170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG  241 (293)
Q Consensus       170 ~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~  241 (293)
T Consensus       142 ~~~-------------~~~l~~~------iG~~~A~ellltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~la  195 (261)
T PRK11423        142 LSG-------------ILNFTND------AGIHIVKEMFFTASPITAERALAVGILNHLVEVEELEDFTLQMA  195 (261)
T ss_pred             CCH-------------HHHHHHH------HHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHH
T ss_conf             538-------------9999999------76999999886289673999998798407548579999999999