HHsearch alignment for GI: 254780747 and conserved domain: TIGR02441

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial; InterPro: IPR012803 Members of this family represent the alpha subunit of the mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (4.2.1.17 from EC) and 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC). Some characterization of these proteins has been done in human (P40939 from SWISSPROT), pig (Q29554 from SWISSPROT) and rat (Q64428 from SWISSPROT). The beta subunit has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0004300 enoyl-CoA hydratase activity, 0006635 fatty acid beta-oxidation, 0005739 mitochondrion, 0016507 fatty acid beta-oxidation multienzyme complex.
Probab=98.31  E-value=2.1e-06  Score=60.31  Aligned_cols=96  Identities=16%  Similarity=0.326  Sum_probs=76.6

Q ss_pred             CCEEEEEEEEEEECCH--------HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH------------------HHHH
Q ss_conf             8728999976662386--------9999999998618998799997588888889999------------------9999
Q gi|254780747|r   35 SPHVARIAIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSAYAGE------------------AIFR   88 (293)
Q Consensus        35 ~~~i~~i~i~G~I~~~--------~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~------------------~i~~   88 (293)
T Consensus        20 ~gdVaVvkid~PN~KvN~L~k~l~~Ef~~v~~~l~~~~~v~SaVliSgKPg~FvAGADI~Ml~Ac~T~~e~t~lS~eaQ~   99 (740)
T TIGR02441        20 KGDVAVVKIDSPNSKVNTLSKELSAEFKEVLNELWTNEAVKSAVLISGKPGSFVAGADIQMLAACKTAQEVTQLSQEAQE   99 (740)
T ss_pred             ECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             06779998778997301113789999999998730682524688974699870325626789872268999998677899


Q ss_pred             HHHHH-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH--HHHH
Q ss_conf             99984-147867996033233223210001110001301--3534
Q gi|254780747|r   89 AIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAET--SLVG  130 (293)
Q Consensus        89 ai~~~-k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~--s~vG  130 (293)
T Consensus       100 ~~~r~E~S~KPiVAAI~GsClGGGLElAlaChYRIAtkD~KT~Lg  144 (740)
T TIGR02441       100 MFERIEKSKKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLG  144 (740)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCC
T ss_conf             999974289875875226310416899875044112236545346