HHsearch alignment for GI: 254780747 and conserved domain: TIGR03133
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.19 E-value=0.0023 Score=41.08 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHCCCC--CC-EEEEECCCCCC-------CHHHHHHHHHHHHHHCCCCCEEEEECCC--CCCCCCCCCCCC
Q ss_conf 999999999861899--87-99997588888-------8899999999999841478679960332--332232100011
Q gi|254780747|r 51 QELIERIERISRDDS--AT-ALIVSLSSPGG-------SAYAGEAIFRAIQKVKNRKPVITEVHEM--AASAGYLISCAS 118 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~--ik-~ivL~i~SpGG-------~~~~~~~i~~ai~~~k~~kpvva~~~~~--~~S~~Y~iAs~a 118 (293)
T Consensus 81 ~Ki~r~~e~A~e~~~~~~~~PvI~l~dSGGaRl~e~~~gl~~~~ei~~~~~~~sg~IPqIsvV~G~~~c~GG~a~~~~l~ 160 (274)
T TIGR03133 81 AKIVGALRLAIEDNRKGQPTAVVLLLDTGGVRLQEANAGLIAIAEIMRAILDARAAVPVIGVIGGRVGCFGGMGIAAGLC 160 (274)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCC
T ss_conf 99999999999807445787779996178876443320012389999999996699987999955455667707700237
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 100013013534555
Q gi|254780747|r 119 NIIVAAETSLVGSIG 133 (293)
Q Consensus 119 d~I~a~p~s~vGsiG 133 (293)
T Consensus 161 D~iIm~~~~~ifl~G 175 (274)
T TIGR03133 161 SYLIMTEEGRLGLSG 175 (274)
T ss_pred CEEEEECCCEEECCC
T ss_conf 389997895795338