HHsearch alignment for GI: 254780747 and conserved domain: pfam01039
>pfam01039 Carboxyl_trans Carboxyl transferase domain. All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.
Probab=91.80 E-value=1 Score=24.43 Aligned_cols=81 Identities=20% Similarity=0.172 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCC-------HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986189987999975888888-------89999999999984147867996033233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGS-------AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~-------~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
T Consensus 79 ~Ki~~~~e~A~~~-~lP-~v~l~dsgG~r~~eg~~~l~~~g~i~~~~~~~s~~iP~is~v~G~~~GggA~~~~~sd~~im 156 (487)
T pfam01039 79 FKITRAMELAIKE-GEP-LIGINDSGGARIQEGVENLRGYGLIFGANSRASGVIPQISLVTGPCAGGGAYSPALGDFIIM 156 (487)
T ss_pred HHHHHHHHHHHHC-CCC-EEEEEECCCEECCCCEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCEEEE
T ss_conf 4479999999985-995-89998242403476313045311799999997499988999537886368888760871588
Q ss_pred CHH-HHHHHHH
Q ss_conf 301-3534555
Q gi|254780747|r 124 AET-SLVGSIG 133 (293)
Q Consensus 124 ~p~-s~vGsiG 133 (293)
T Consensus 157 ~~~~s~l~~aG 167 (487)
T pfam01039 157 VKGTSPMFLTG 167 (487)
T ss_pred ECCCCCEECCC
T ss_conf 21764332248