HHsearch alignment for GI: 254780747 and conserved domain: pfam06833
>pfam06833 MdcE Malonate decarboxylase gamma subunit (MdcE). This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase.
Probab=94.69 E-value=0.11 Score=30.56 Aligned_cols=78 Identities=15% Similarity=0.239 Sum_probs=54.1
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH----------HHHHHHHC-CCCCEEEEECCCCCCCCCCC-CCCCCC
Q ss_conf 9999999861899879999758888888999999----------99999841-47867996033233223210-001110
Q gi|254780747|r 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAI----------FRAIQKVK-NRKPVITEVHEMAASAGYLI-SCASNI 120 (293)
Q Consensus 53 l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i----------~~ai~~~k-~~kpvva~~~~~~~S~~Y~i-As~ad~ 120 (293)
T Consensus 51 LA~~Vld~i~~~~~rpIl~lvD~~~Q~~~rrdEllGi~~~lAhla~~~~~AR~~GHpvI~Lv~g~a~sGaFla~gl~a~~ 130 (234)
T pfam06833 51 LAAAVLEAIEQRDKRPILALVDTPSQALSRRDELLGINQALAHLAKAYDLARLAGHPVIGLLYGKAMSGAFLAHGLQANR 130 (234)
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCC
T ss_conf 99999999971999877999807765433489984099999999999999997599769987544011899998876352
Q ss_pred CCCCHHHHHH
Q ss_conf 0013013534
Q gi|254780747|r 121 IVAAETSLVG 130 (293)
Q Consensus 121 I~a~p~s~vG 130 (293)
T Consensus 131 ~~ALp~a~i~ 140 (234)
T pfam06833 131 LIALPGAMVH 140 (234)
T ss_pred HHCCCCCHHH
T ss_conf 3117985031