Query gi|254780747|ref|YP_003065160.1| putative protease IV transmembrane protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 293
No_of_seqs 176 out of 2224
Neff 7.5
Searched_HMMs 23785
Date Mon May 30 13:43:02 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780747.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bf0_A Protease 4; bacterial, 100.0 0 0 387.9 16.3 228 32-261 297-534 (593)
2 3bf0_A Protease 4; bacterial, 100.0 0 0 332.4 15.4 219 25-244 20-277 (593)
3 3bpp_A 1510-N membrane proteas 100.0 5.6E-29 2.4E-33 201.0 11.3 172 33-238 5-183 (230)
4 3p2l_A ATP-dependent CLP prote 99.6 9.2E-16 3.9E-20 117.8 9.1 161 40-232 32-197 (201)
5 1tg6_A Putative ATP-dependent 99.6 9.3E-15 3.9E-19 111.5 10.5 159 40-230 84-247 (277)
6 2f6i_A ATP-dependent CLP prote 99.6 5.1E-15 2.2E-19 113.1 9.1 157 40-229 41-202 (215)
7 1yg6_A ATP-dependent CLP prote 99.6 3.7E-14 1.6E-18 107.7 11.1 158 40-229 28-190 (193)
8 2cby_A ATP-dependent CLP prote 99.6 1.5E-14 6.3E-19 110.2 9.0 162 40-233 29-195 (208)
9 1y7o_A ATP-dependent CLP prote 99.5 2.7E-14 1.1E-18 108.6 9.8 162 40-231 47-213 (218)
10 3he2_A Enoyl-COA hydratase ECH 99.1 2E-10 8.4E-15 84.2 9.4 162 35-244 28-209 (264)
11 3kqf_A Enoyl-COA hydratase/iso 99.1 2.4E-10 1E-14 83.7 7.6 164 31-241 12-201 (265)
12 1wdk_A Fatty oxidation complex 99.1 1.2E-09 5E-14 79.3 10.3 157 34-237 13-198 (715)
13 1nzy_A Dehalogenase, 4-chlorob 99.0 2E-09 8.3E-14 77.9 10.9 161 35-241 10-199 (269)
14 3l3s_A Enoyl-COA hydratase/iso 99.0 4E-09 1.7E-13 76.0 12.2 159 35-241 14-202 (263)
15 1q52_A MENB; lyase, structural 99.0 1.4E-09 5.9E-14 78.9 9.6 160 35-241 44-247 (314)
16 2j5i_A P-hydroxycinnamoyl COA 99.0 3E-09 1.3E-13 76.8 11.2 160 35-241 16-205 (276)
17 3njd_A Enoyl-COA hydratase; ss 99.0 2.4E-09 1E-13 77.4 10.6 156 35-240 42-252 (333)
18 2ej5_A Enoyl-COA hydratase sub 99.0 9.9E-10 4.1E-14 79.8 8.2 160 35-241 10-193 (257)
19 1wz8_A Enoyl-COA hydratase; ly 99.0 1.2E-09 5.2E-14 79.2 8.7 162 32-240 15-202 (264)
20 2q35_A CURF; crotonase, lyase; 99.0 2.3E-09 9.5E-14 77.6 9.6 160 35-241 10-189 (243)
21 1sg4_A 3,2-trans-enoyl-COA iso 99.0 1.5E-09 6.3E-14 78.7 8.5 159 34-239 11-196 (260)
22 2x58_A Peroxisomal bifunctiona 99.0 3.9E-09 1.6E-13 76.1 10.3 162 35-242 13-194 (727)
23 3moy_A Probable enoyl-COA hydr 99.0 1.4E-09 5.8E-14 78.9 8.0 161 33-240 15-198 (263)
24 3h02_A Naphthoate synthase; ID 99.0 1.3E-09 5.5E-14 79.0 7.8 160 34-240 33-220 (288)
25 3i47_A Enoyl COA hydratase/iso 99.0 4.1E-09 1.7E-13 75.9 10.4 157 35-239 11-195 (268)
26 2a7k_A CARB; crotonase, antibi 99.0 6.2E-09 2.6E-13 74.8 11.3 160 34-241 6-192 (250)
27 1dci_A Dienoyl-COA isomerase; 99.0 4.2E-09 1.8E-13 75.9 10.3 156 33-234 9-200 (275)
28 3gow_A PAAG, probable enoyl-CO 99.0 2.4E-09 1E-13 77.4 9.0 159 35-240 7-189 (254)
29 3pea_A Enoyl-COA hydratase/iso 99.0 1.8E-09 7.6E-14 78.2 8.2 158 35-239 13-195 (261)
30 3fdu_A Putative enoyl-COA hydr 99.0 1.1E-08 4.7E-13 73.2 11.8 152 35-233 12-190 (266)
31 3lke_A Enoyl-COA hydratase; ny 99.0 7.6E-09 3.2E-13 74.3 10.8 157 34-237 10-197 (263)
32 3h81_A Enoyl-COA hydratase ECH 98.9 2E-09 8.4E-14 77.9 7.6 159 35-240 32-213 (278)
33 2wtb_A MFP2, fatty acid multif 98.9 9.8E-10 4.1E-14 79.9 6.0 159 33-238 13-198 (725)
34 2pbp_A Enoyl-COA hydratase sub 98.9 1.4E-09 6.1E-14 78.8 6.8 160 35-241 12-194 (258)
35 1hzd_A AUH, AU-binding protein 98.9 2E-09 8.4E-14 77.9 7.4 161 34-241 18-208 (272)
36 3ome_A Enoyl-COA hydratase; ss 98.9 4.5E-09 1.9E-13 75.7 8.7 158 35-240 30-216 (282)
37 2iex_A Dihydroxynapthoic acid 98.9 4.2E-09 1.8E-13 75.9 8.6 160 35-241 19-205 (272)
38 2j5g_A ALR4455 protein; enzyme 98.9 9.3E-09 3.9E-13 73.7 10.2 161 34-241 30-216 (263)
39 1uiy_A Enoyl-COA hydratase; ly 98.9 8.7E-09 3.7E-13 73.9 9.6 158 35-240 6-191 (253)
40 3gkb_A Putative enoyl-COA hydr 98.9 2.9E-09 1.2E-13 76.9 7.1 159 35-240 16-205 (287)
41 3myb_A Enoyl-COA hydratase; ss 98.9 9.1E-09 3.8E-13 73.8 9.0 158 35-240 33-216 (286)
42 3g64_A Putative enoyl-COA hydr 98.9 1.4E-08 6E-13 72.5 10.0 159 35-239 24-211 (279)
43 2f6q_A Peroxisomal 3,2-trans-e 98.9 2.7E-08 1.1E-12 70.8 11.3 159 35-241 33-220 (280)
44 1mj3_A Enoyl-COA hydratase, mi 98.9 3E-09 1.2E-13 76.8 6.1 159 35-240 14-195 (260)
45 2vx2_A Enoyl-COA hydratase dom 98.9 8.3E-09 3.5E-13 74.0 8.2 156 36-239 41-222 (287)
46 2fbm_A Y chromosome chromodoma 98.9 2.4E-08 9.9E-13 71.2 10.6 159 35-241 30-222 (291)
47 1pjh_A Enoyl-COA isomerase; EC 98.9 1.6E-08 6.9E-13 72.1 9.5 148 35-229 16-200 (280)
48 3h0u_A Putative enoyl-COA hydr 98.9 5.6E-09 2.4E-13 75.1 7.1 160 35-241 15-203 (289)
49 3p85_A Enoyl-COA hydratase; ss 98.8 1.3E-09 5.4E-14 79.1 3.8 159 35-240 32-206 (270)
50 2ppy_A Enoyl-COA hydratase; be 98.8 2.5E-08 1.1E-12 71.0 10.0 160 34-240 15-200 (265)
51 1ef8_A Methylmalonyl COA decar 98.8 1.4E-08 6E-13 72.5 8.7 159 35-241 11-195 (261)
52 3isa_A Putative enoyl-COA hydr 98.8 2.5E-08 1.1E-12 71.0 9.8 154 34-238 13-191 (254)
53 3hp0_A Putative polyketide bio 98.8 2.7E-08 1.1E-12 70.8 9.5 151 34-233 13-190 (267)
54 3hin_A Putative 3-hydroxybutyr 98.8 6.9E-09 2.9E-13 74.5 6.2 155 36-239 24-203 (275)
55 2np9_A DPGC; protein inhibitor 98.8 1.7E-08 7E-13 72.1 7.9 159 35-240 174-381 (440)
56 3p5m_A Enoyl-COA hydratase/iso 98.8 3.8E-08 1.6E-12 69.8 9.2 158 35-239 13-189 (255)
57 3ju1_A Enoyl-COA hydratase/iso 98.8 5E-08 2.1E-12 69.1 9.7 155 35-236 49-235 (407)
58 3bpt_A 3-hydroxyisobutyryl-COA 98.7 1E-07 4.3E-12 67.1 10.5 154 35-235 13-194 (363)
59 3lao_A Enoyl-COA hydratase/iso 98.7 6.4E-09 2.7E-13 74.7 3.9 159 35-240 19-203 (258)
60 1szo_A 6-oxocamphor hydrolase; 98.7 1.7E-07 7.3E-12 65.7 11.0 160 35-241 23-207 (257)
61 2gtr_A CDY-like, chromodomain 98.7 6.1E-08 2.6E-12 68.6 8.5 158 35-240 12-199 (261)
62 2w3p_A Benzoyl-COA-dihydrodiol 98.6 5.1E-07 2.1E-11 62.8 11.8 161 35-239 28-231 (556)
63 3oc7_A Enoyl-COA hydratase; se 98.6 2.4E-07 1E-11 64.8 9.8 148 35-229 18-194 (267)
64 3ot6_A Enoyl-COA hydratase/iso 98.6 1.2E-07 5E-12 66.7 8.2 158 35-241 13-194 (232)
65 3m6n_A RPFF protein; enoyl-COA 98.3 2.2E-06 9.4E-11 58.7 8.2 161 33-240 37-241 (305)
66 2f9i_A Acetyl-coenzyme A carbo 97.8 7.1E-05 3E-09 49.3 7.5 121 51-229 147-275 (327)
67 2f9y_A Acetyl-COA carboxylase, 97.4 0.00014 5.9E-09 47.4 4.7 120 51-228 161-288 (339)
68 3mwd_B ATP-citrate synthase; A 96.5 0.01 4.4E-07 35.6 7.4 56 52-110 210-265 (334)
69 3ff6_A Acetyl-COA carboxylase 96.4 0.052 2.2E-06 31.3 11.4 173 51-239 444-637 (760)
70 2fp4_A Succinyl-COA ligase [GD 94.9 0.036 1.5E-06 32.2 5.0 53 53-108 195-250 (305)
71 2f9i_B Acetyl-coenzyme A carbo 94.8 0.052 2.2E-06 31.2 5.7 125 51-240 143-276 (285)
72 1x0u_A Hypothetical methylmalo 94.6 0.022 9.3E-07 33.6 3.5 27 97-123 164-190 (522)
73 3k50_A Putative S41 protease; 94.6 0.14 6E-06 28.5 7.5 85 35-120 186-314 (403)
74 2yv2_A Succinyl-COA synthetase 94.4 0.096 4E-06 29.6 6.3 40 49-91 80-119 (297)
75 1vrg_A Propionyl-COA carboxyla 94.3 0.08 3.3E-06 30.1 5.7 37 96-132 403-443 (527)
76 2nu8_A Succinyl-COA ligase [AD 94.3 0.12 5E-06 29.0 6.6 56 52-111 186-241 (288)
77 1on3_A Methylmalonyl-COA carbo 94.2 0.049 2.1E-06 31.4 4.5 81 51-133 117-204 (523)
78 3k8x_A Acetyl-COA carboxylase; 94.1 0.19 8E-06 27.7 7.3 172 51-238 455-648 (758)
79 1oi7_A Succinyl-COA synthetase 92.8 0.31 1.3E-05 26.3 6.6 39 50-91 74-112 (288)
80 1on3_A Methylmalonyl-COA carbo 92.8 0.26 1.1E-05 26.9 6.1 142 51-240 348-502 (523)
81 2csu_A 457AA long hypothetical 92.6 0.26 1.1E-05 26.8 6.0 73 35-111 149-244 (457)
82 2yv1_A Succinyl-COA ligase [AD 92.3 0.28 1.2E-05 26.6 5.8 21 51-72 81-101 (294)
83 3dor_A Protein CT_858, CPAF; m 91.9 0.14 6.1E-06 28.4 4.0 52 37-90 292-356 (583)
84 1fc6_A Photosystem II D1 prote 90.8 0.8 3.3E-05 23.8 7.4 85 35-120 198-307 (388)
85 2f9y_B Acetyl-coenzyme A carbo 90.6 0.4 1.7E-05 25.6 5.2 81 51-133 140-229 (304)
86 3llo_A Prestin; STAS domain, c 89.5 1 4.3E-05 23.1 6.5 69 34-102 27-101 (143)
87 3iav_A Propionyl-COA carboxyla 89.4 0.79 3.3E-05 23.8 5.9 79 51-131 119-205 (530)
88 1pix_A Glutaconyl-COA decarbox 88.8 0.31 1.3E-05 26.3 3.5 81 51-133 127-218 (587)
89 3n6r_B Propionyl-COA carboxyla 87.7 1.2 5.1E-05 22.6 6.0 78 51-130 127-212 (531)
90 1th8_B Anti-sigma F factor ant 86.6 1.6 6.5E-05 21.9 6.9 67 35-101 10-80 (116)
91 2nu8_B SCS-beta, succinyl-COA 86.1 1.2 5.2E-05 22.6 5.3 137 47-192 25-191 (388)
92 3oir_A Sulfate transporter sul 85.3 1.8 7.5E-05 21.5 6.9 65 35-101 21-89 (135)
93 2bzr_A Propionyl-COA carboxyla 84.1 1.9 8.1E-05 21.4 5.5 79 51-131 130-216 (548)
94 3dmy_A Protein FDRA; predicted 84.0 2.1 8.7E-05 21.2 6.2 69 35-107 112-209 (480)
95 1h4x_A SPOIIAA, anti-sigma F f 83.0 2.3 9.5E-05 20.9 6.4 68 36-103 10-80 (117)
96 1sbo_A Putative anti-sigma fac 82.8 2.3 9.7E-05 20.9 7.8 67 35-101 11-81 (110)
97 3oiz_A Antisigma-factor antago 82.8 2.3 9.7E-05 20.9 6.5 65 34-101 13-81 (99)
98 3gf3_A Glutaconyl-COA decarbox 82.7 1.2 5E-05 22.6 3.9 81 51-133 128-219 (588)
99 2fp4_B Succinyl-COA ligase [GD 82.5 2.2 9.1E-05 21.0 5.2 137 47-192 25-198 (395)
100 2ka5_A Putative anti-sigma fac 81.9 2.5 0.0001 20.7 7.0 68 35-102 19-89 (125)
101 1j7x_A IRBP, interphotorecepto 81.3 1 4.3E-05 23.1 3.2 56 35-90 105-165 (302)
102 2vy9_A Anti-sigma-factor antag 78.2 3.3 0.00014 19.9 8.6 65 36-100 11-79 (123)
103 3mgl_A Sulfate permease family 73.4 4.4 0.00018 19.1 7.0 64 36-101 19-86 (130)
104 1xdp_A Polyphosphate kinase; P 69.8 5.3 0.00022 18.6 5.8 55 49-107 348-403 (687)
105 2o8r_A Polyphosphate kinase; s 68.7 5.5 0.00023 18.5 5.8 50 51-104 355-405 (705)
106 2iss_D Glutamine amidotransfer 68.4 5.6 0.00024 18.4 5.4 63 37-106 22-101 (208)
107 1y7p_A Hypothetical protein AF 67.7 5.8 0.00024 18.3 5.9 69 46-126 126-195 (223)
108 3eno_A Putative O-sialoglycopr 65.6 2.4 0.0001 20.7 1.9 37 64-102 72-110 (334)
109 2uyg_A 3-dehydroquinate dehydr 64.3 5.7 0.00024 18.4 3.6 67 51-123 53-124 (149)
110 1q7r_A Predicted amidotransfer 62.8 7.2 0.0003 17.7 5.9 63 37-106 25-104 (219)
111 3n8k_A 3-dehydroquinate dehydr 59.9 8.1 0.00034 17.4 3.8 66 51-123 82-152 (172)
112 1k32_A Tricorn protease; prote 57.3 9 0.00038 17.2 4.6 78 35-117 850-947 (1045)
113 1h05_A 3-dehydroquinate dehydr 56.7 9.2 0.00039 17.1 4.3 66 51-123 56-126 (146)
114 2ivn_A O-sialoglycoprotein end 56.4 2.9 0.00012 20.2 1.0 51 51-103 49-106 (330)
115 3c3w_A Two component transcrip 53.9 10 0.00043 16.8 7.6 167 44-241 30-208 (225)
116 1gpw_B Amidotransferase HISH; 52.7 11 0.00045 16.7 6.6 64 37-106 2-87 (201)
117 1g6h_A High-affinity branched- 52.2 11 0.00046 16.6 7.6 26 69-94 175-200 (257)
118 3gfo_A Cobalt import ATP-bindi 50.7 11 0.00048 16.5 5.3 22 165-186 169-190 (275)
119 1uqr_A 3-dehydroquinate dehydr 49.0 12 0.00051 16.3 7.3 67 51-124 55-126 (154)
120 2c4w_A 3-dehydroquinate dehydr 48.2 12 0.00052 16.2 4.1 67 51-123 65-136 (176)
121 2qi9_C Vitamin B12 import ATP- 47.8 13 0.00053 16.2 6.7 21 164-184 158-178 (249)
122 1r5j_A Putative phosphotransac 46.0 14 0.00057 16.0 3.6 126 90-240 17-147 (337)
123 3en9_A Glycoprotease, O-sialog 46.0 7.7 0.00032 17.6 1.8 68 51-123 234-303 (540)
124 3kip_A 3-dehydroquinase, type 45.7 14 0.00058 16.0 4.3 67 51-123 70-141 (167)
125 2rfv_A Methionine gamma-lyase; 45.5 7.8 0.00033 17.5 1.7 50 55-109 140-190 (398)
126 1gqo_A Dehydroquinase, dhqase; 40.5 16 0.00069 15.5 5.6 66 51-123 54-124 (143)
127 1ji0_A ABC transporter; ATP bi 38.9 17 0.00073 15.3 5.6 12 166-177 166-177 (240)
128 3lwz_A 3-dehydroquinate dehydr 38.3 18 0.00075 15.3 6.8 66 51-123 61-131 (153)
129 1a4i_A Methylenetetrahydrofola 36.6 19 0.00079 15.1 2.9 44 50-93 78-121 (301)
130 1gc0_A Methionine gamma-lyase; 35.6 12 0.00052 16.3 1.5 66 55-125 141-209 (398)
131 3l07_A Bifunctional protein fo 35.6 20 0.00082 15.0 4.3 42 49-92 76-117 (285)
132 2abw_A PDX2 protein, glutamina 35.2 20 0.00084 15.0 5.7 65 35-106 3-90 (227)
133 1qh4_A Creatine kinase; cancer 33.0 22 0.00091 14.8 5.0 104 76-185 241-356 (380)
134 1hq1_A Signal recognition part 33.0 14 0.0006 15.9 1.5 74 129-209 17-91 (105)
135 1td9_A Phosphate acetyltransfe 32.6 22 0.00092 14.7 4.9 40 200-239 100-144 (329)
136 2gjl_A Hypothetical protein PA 32.5 22 0.00092 14.7 4.3 169 63-241 136-313 (328)
137 3ndn_A O-succinylhomoserine su 32.4 17 0.00071 15.4 1.7 65 55-124 157-224 (414)
138 1mio_A Nitrogenase molybdenum 32.2 9.2 0.00039 17.1 0.4 107 50-158 119-241 (533)
139 1b0u_A Histidine permease; ABC 31.1 23 0.00097 14.6 5.6 10 142-151 134-143 (262)
140 3p2o_A Bifunctional protein fo 31.0 23 0.00098 14.5 4.1 44 49-94 75-118 (285)
141 2vyc_A Biodegradative arginine 30.8 23 0.00099 14.5 5.4 51 49-101 291-346 (755)
142 1wls_A L-asparaginase; structu 30.2 24 0.001 14.5 2.3 44 51-101 61-106 (328)
143 2ihy_A ABC transporter, ATP-bi 29.6 25 0.001 14.4 7.3 23 164-186 186-208 (279)
144 1njh_A Protein YOJF; structura 29.0 25 0.0011 14.3 2.2 44 82-130 8-51 (119)
145 1ibj_A CBL, cystathionine beta 28.6 24 0.001 14.5 2.0 64 55-123 208-274 (464)
146 3bk7_A ABC transporter ATP-bin 28.5 26 0.0011 14.3 7.2 67 51-123 234-300 (607)
147 2yz2_A Putative ABC transporte 28.4 26 0.0011 14.3 7.4 18 165-182 164-181 (266)
148 4pga_A Glutaminase-asparaginas 27.3 27 0.0011 14.1 2.4 15 33-47 7-21 (337)
149 2wns_A Orotate phosphoribosylt 27.2 13 0.00054 16.2 0.4 43 142-186 155-200 (205)
150 3nh6_A ATP-binding cassette SU 26.9 27 0.0012 14.1 5.2 16 220-235 262-277 (306)
151 3cog_A Cystathionine gamma-lya 26.9 25 0.001 14.4 1.8 66 54-123 141-209 (403)
152 2ghi_A Transport protein; mult 26.7 28 0.0012 14.1 6.2 10 51-60 60-69 (260)
153 2o2z_A Hypothetical protein; N 26.4 28 0.0012 14.0 2.1 89 116-208 177-266 (323)
154 2axn_A 6-phosphofructo-2-kinas 23.8 31 0.0013 13.7 5.5 18 168-185 269-286 (520)
155 1g57_A DHBP synthase, 3,4-dihy 23.7 31 0.0013 13.7 3.0 152 83-252 13-175 (217)
156 1tks_A 3,4-dihydroxy-2-butanon 23.7 31 0.0013 13.7 6.1 147 86-251 8-166 (204)
157 2fq6_A Cystathionine beta-lyas 23.7 31 0.0013 13.7 3.3 52 56-110 159-211 (415)
158 3nxk_A Cytoplasmic L-asparagin 23.3 32 0.0013 13.7 5.5 45 52-102 76-121 (334)
159 2ctz_A O-acetyl-L-homoserine s 23.2 32 0.0013 13.7 1.8 64 57-124 136-203 (421)
160 2nq2_C Hypothetical ABC transp 23.1 32 0.0014 13.7 5.0 20 164-183 153-172 (253)
161 2vu1_A Acetyl-COA acetyltransf 22.5 33 0.0014 13.6 2.2 74 53-128 35-110 (392)
162 1o7j_A L-asparaginase; atomic 22.2 34 0.0014 13.5 3.3 22 52-73 72-93 (327)
163 1k4i_A 3,4-dihydroxy-2-butanon 22.2 34 0.0014 13.5 6.3 147 84-249 13-172 (233)
164 1vpl_A ABC transporter, ATP-bi 22.1 34 0.0014 13.5 6.4 21 164-184 171-191 (256)
165 3bv8_A Tetrahydrodipicolinate 22.0 34 0.0014 13.5 3.0 67 82-156 5-72 (87)
166 3cvj_A Putative phosphoheptose 22.0 34 0.0014 13.5 2.6 90 66-161 108-227 (243)
167 1pff_A Methionine gamma-lyase; 22.0 29 0.0012 14.0 1.4 51 56-110 75-126 (331)
168 1b0a_A Protein (fold bifunctio 22.0 34 0.0014 13.5 4.3 41 49-91 75-115 (288)
169 2qsj_A DNA-binding response re 21.7 34 0.0014 13.5 3.7 49 52-103 37-85 (154)
170 1afw_A 3-ketoacetyl-COA thiola 21.2 35 0.0015 13.4 4.8 65 64-133 59-127 (393)
171 1qgn_A Protein (cystathionine 21.1 35 0.0015 13.4 2.2 64 56-123 191-257 (445)
172 3d6k_A Putative aminotransfera 20.3 37 0.0015 13.3 4.1 53 54-106 167-221 (422)
No 1
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=100.00 E-value=0 Score=387.88 Aligned_cols=228 Identities=29% Similarity=0.456 Sum_probs=212.1
Q ss_pred CCCCCEEEEEEEEEEECC---------HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCCEEE
Q ss_conf 677872899997666238---------6999999999861899879999758888888999999999998414-786799
Q gi|254780747|r 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVIT 101 (293)
Q Consensus 32 ~~~~~~i~~i~i~G~I~~---------~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~-~kpvva 101 (293)
...+++|++|.++|+|++ .+.+++.|++|.+|++||||+|+||||||++.++++|+++|+++|+ +||||+
T Consensus 297 ~~~~~~Iavi~~~G~I~~g~~~~~~~~~~~~~~~l~~a~~d~~vkavvLrInSpGGs~~as~~i~~~i~~~k~~~KPVv~ 376 (593)
T 3bf0_A 297 ADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVV 376 (593)
T ss_dssp CCCSCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 45678405999634240477767876617889999866507542179999979898577899999999999854997899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 60332332232100011100013013534555653021024567774204225531552112346667899998877777
Q gi|254780747|r 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 (293)
Q Consensus 102 ~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~ 181 (293)
+++++|+||||||||+||+|||+|+|++|||||++..++++++++|+||+.+.+++|++|+. +|++++++++++.+|..
T Consensus 377 ~~~~~aASggY~ia~~ad~I~A~p~titGSIGV~~~~~~~~~~~~k~Gi~~~~v~~g~~~~~-~~~~~~~~e~~~~~q~~ 455 (593)
T 3bf0_A 377 SMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLS 455 (593)
T ss_dssp EEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCC-CTTSCCCHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHCCCEEEECCCCEEEECCEEEECCCHHHHHHHCCCEEEEEECCCCCCC-CCCCCCCHHHHHHHHHH
T ss_conf 98786641555765336747866865144222047515688888867953666543556767-86667998999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHH
Q ss_conf 66666778999985149998899887349823788998779806238989999999974187765301201442112455
Q gi|254780747|r 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 (293)
Q Consensus 182 l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
++++|++|++.|+++|+++.++++++++|++|+|+||+++||||+||++++|+++++++++..+ ..++.|+++.++...
T Consensus 456 ~~~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~iG~~~~ai~~a~~~a~l~~-~~v~~~~~~~~~~~~ 534 (593)
T 3bf0_A 456 IENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHLEYYVDEPTFFDK 534 (593)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSCSCC-EEEEC----------
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEECCCCCCHHHH
T ss_conf 9999999999998636999678787558758878999886997545999999999999749996-436762789999999
No 2
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=100.00 E-value=0 Score=332.43 Aligned_cols=219 Identities=21% Similarity=0.259 Sum_probs=196.9
Q ss_pred HHCCCCCCCCCCEEEEEEEEEEECCH---------------------------HHHHHHHHHHHCCCCCCEEEEECCC-C
Q ss_conf 70565556778728999976662386---------------------------9999999998618998799997588-8
Q gi|254780747|r 25 FSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QELIERIERISRDDSATALIVSLSS-P 76 (293)
Q Consensus 25 ~~~~~~~~~~~~~i~~i~i~G~I~~~---------------------------~~l~~~l~~a~~d~~ik~ivL~i~S-p 76 (293)
.........+++.+++|+++|+|++. .++++.|++|++|++|+||+|++++ +
T Consensus 20 ~~g~~~~~~~~~~aL~l~l~G~ive~~~~~~p~~~~~~~~~g~~~~~~~~~~l~div~~i~~Aa~D~~IkgIvL~~~~~~ 99 (593)
T 3bf0_A 20 HMGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFA 99 (593)
T ss_dssp -----------CCEEEECCEEEEESCC--------------------CCEEEHHHHHHHHHHHHHCTTCCCEEEECTEEE
T ss_pred ECCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 20578877687738999477168536888882888878751688775444449999999999834999508999806988
Q ss_pred CCCHHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEE
Q ss_conf 888899999999999841-4786799603323322321000111000130135345556530210245677742042255
Q gi|254780747|r 77 GGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 (293)
Q Consensus 77 GG~~~~~~~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~ 155 (293)
||++++.++|+++|++|| ++||||+|.+. +++++||+||+||+|||+|.+.++++|+.++.+|++++|+|+||+++++
T Consensus 100 gg~~a~~~ei~~al~~fk~sgKpVvA~~~~-~~~~~Y~LAS~AD~I~~~p~g~v~~~G~~~~~~~~k~~LdKlGI~~~v~ 178 (593)
T 3bf0_A 100 GGDQPSMQYIGKALKEFRDSGKPVYAVGEN-YSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVF 178 (593)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCCEEEEESC-EEHHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHCCEEEECCCCEEEEEEEEEECCCHHHHHHHCCCCEEEE
T ss_conf 873899999999999999709929999615-5213237464389899889966888703886256778999759806999
Q ss_pred EECCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH--------HHHHCCCCCCHHHHHHCCCCC
Q ss_conf 315521123466--6789999887777766666778999985149998899--------887349823788998779806
Q gi|254780747|r 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--------LVLSDGRIWTGAEAKKVGLID 225 (293)
Q Consensus 156 ~~g~~K~~~~p~--~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~--------~~~~~g~~~~~~~A~~~GLvD 225 (293)
++|+||+++||| .+||+++|++++++++++|++|++.|+++|+++.+.+ +.+.++.+|++++|+++||||
T Consensus 179 ~~G~yKsa~epf~~~~mS~e~re~~~~ll~~l~~~f~~~Va~~R~l~~~~v~~~~~~~~~~l~~~~~~~a~~Al~~gLVD 258 (593)
T 3bf0_A 179 RVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVD 258 (593)
T ss_dssp EECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSS
T ss_pred EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 61564566786666789999999999999999999999998862788311223455688887760761499999865542
Q ss_pred CCCCHHHHHHHHHHHCCCC
Q ss_conf 2389899999999741877
Q gi|254780747|r 226 VVGGQEEVWQSLYALGVDQ 244 (293)
Q Consensus 226 ~ig~~~~a~~~l~~~~~~~ 244 (293)
++++++++.+++.+..+..
T Consensus 259 ~l~~~de~~~~l~~~~g~~ 277 (593)
T 3bf0_A 259 ALASSAEIEKALTKEFGWS 277 (593)
T ss_dssp EECCHHHHHHHHHHHHCEE
T ss_pred HCCCHHHHHHHHHHHHCCC
T ss_conf 0012566777778750866
No 3
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=99.96 E-value=5.6e-29 Score=200.97 Aligned_cols=172 Identities=26% Similarity=0.315 Sum_probs=136.0
Q ss_pred CCCCEEEEEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE---CCCC
Q ss_conf 778728999976662386--99999999986189987999975888888899999999999841478679960---3323
Q gi|254780747|r 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMA 107 (293)
Q Consensus 33 ~~~~~i~~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~---~~~~ 107 (293)
..++.|++|+++|+|... +.+.+.|+.|.+ +++++|+|+||||||++.++.+|+++|+++ ++|+++++ +++|
T Consensus 5 ~~~~~V~vi~i~G~I~~~~~~~i~~~l~~a~~-~~~kaivL~IdSPGG~v~~~~~I~~~i~~~--~~~v~~~v~~~~~~A 81 (230)
T 3bpp_A 5 LAKNIVYVAQIKGQITSYTYDQFDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQRIQQS--KIPVIIYVYPPGASA 81 (230)
T ss_dssp -CCSEEEEEEEESSBCHHHHHHHHHHHHHHHH-TTCSEEEEEEEBSCBCHHHHHHHHHHHHTC--SSCEEEEECSTTCEE
T ss_pred CCCCEEEEEEEEEEECHHHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCHHH
T ss_conf 57897999998768886999999999999976-899869999859881899999999998604--678857999734467
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 32232100011100013013534555653021024567774204225531552112346667899998877777666667
Q gi|254780747|r 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 (293)
Q Consensus 108 ~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~ 187 (293)
+|+|||||++||+|||+|++.+|++|+++......... ... ..+...+.
T Consensus 82 aS~g~~ia~a~d~i~~~p~s~iGs~gv~~~~~~~~~~~-----------------------~~~--------~~~~~~~~ 130 (230)
T 3bpp_A 82 ASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSII-----------------------EAP--------PAITNYFI 130 (230)
T ss_dssp ETHHHHHHHTSSEEEECTTCEEECCCCEEECCSSSCCE-----------------------ECC--------HHHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHH-----------------------HHH--------HHHHHHHH
T ss_conf 77789988508989978998175645423578850267-----------------------778--------88899999
Q ss_pred HHHHHHHHCCCCCHHHHHH-HHCCCCCCHHHHHHCCCCCCCCC-HHHHHHHHH
Q ss_conf 7899998514999889988-73498237889987798062389-899999999
Q gi|254780747|r 188 WFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSLY 238 (293)
Q Consensus 188 ~f~~~Va~~R~~~~~~~~~-~~~g~~~~~~~A~~~GLvD~ig~-~~~a~~~l~ 238 (293)
.|.+.+++.|+.+.+..++ +.++++|++++|+++||+|+++. .+++++.+.
T Consensus 131 ~~~~~~a~~~g~~~~~~~~~v~~~~~~~~~eA~~~GlvD~i~~~~~~ll~~~~ 183 (230)
T 3bpp_A 131 AYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELLKKSN 183 (230)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTCCEECHHHHHHTTSCSEECSSHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEECCCHHHHHHHCC
T ss_conf 99999999939499999988766878649999981973002389999998727
No 4
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp}
Probab=99.63 E-value=9.2e-16 Score=117.80 Aligned_cols=161 Identities=19% Similarity=0.221 Sum_probs=123.2
Q ss_pred EEEEEEEECC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 9997666238--69999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~--~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
+|-+.|+|.+ ...++..|..+..++.-+.|.|.||||||++..+..|+++|+..+ .||++++.+.|+|.|.+|.++
T Consensus 32 iI~l~g~I~~~~~~~~i~~l~~l~~~~~~~~I~l~INSpGG~v~~g~ai~d~i~~~~--~~V~Tv~~G~aaS~a~lil~a 109 (201)
T 3p2l_A 32 IVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIK--PDVSTICIGLAASMGSLLLAG 109 (201)
T ss_dssp EEEEESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSS--SCEEEEEEEEEETHHHHHHHT
T ss_pred EEEECCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHC
T ss_conf 899898686899999999999987336889869998189987889999999998479--998999945287679999967
Q ss_pred CC--CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11--0001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 SN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 ad--~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
|+ +-++.|++.+.. |. +..-..|+ ..+-+.....++...+.+.+..++
T Consensus 110 G~k~~R~~~pns~iMi------Hq------------~~~~~~G~------------~~di~~~~~el~~~~~~i~~i~a~ 159 (201)
T 3p2l_A 110 GAKGKRYSLPSSQIMI------HQ------------PLGGFRGQ------------ASDIEIHAKNILRIKDRLNKVLAH 159 (201)
T ss_dssp SSTTCEEECTTCEEEE------CC------------CEEEEEEE------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCEEEEE------CC------------CCCCCCCC------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9988687574704677------15------------67788857------------999999999999999999999999
Q ss_pred CCCCCHHHHHHHHCCCC-CCHHHHHHCCCCCCCCCHHH
Q ss_conf 14999889988734982-37889987798062389899
Q gi|254780747|r 196 SRNIPYDKTLVLSDGRI-WTGAEAKKVGLIDVVGGQEE 232 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g~~-~~~~~A~~~GLvD~ig~~~~ 232 (293)
..|.+.+++.+..+... ++|+||+++||||+|....+
T Consensus 160 ~tg~~~~~i~~~~~rd~~lta~EAleyGliD~Ii~~~~ 197 (201)
T 3p2l_A 160 HTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESRE 197 (201)
T ss_dssp HHCCCHHHHHHHTSSCEEEEHHHHHHHTSCSEECCCSC
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCH
T ss_conf 97959999998614784357999998499849705551
No 5
>1tg6_A Putative ATP-dependent CLP protease proteolytic subunit; mitochondrial CLPP, CLP/HSP 100, X-RAY crystallography, ATP- dependent protease; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=99.59 E-value=9.3e-15 Score=111.46 Aligned_cols=159 Identities=18% Similarity=0.209 Sum_probs=117.9
Q ss_pred EEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99976662386--9999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
+|-+.|+|.+. ..++.+|-....++.-+-|.|+||||||++...-.|+++++..+ -||.+++.+.|+|.|-+|+++
T Consensus 84 IIfl~g~Idd~~a~~iiaqLl~Le~ed~~k~I~lyINSpGGsv~~GlaIyD~m~~i~--~~V~Tv~~G~AaSmaslIlaa 161 (277)
T 1tg6_A 84 IVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYIL--NPICTWCVGQAASMGSLLLAA 161 (277)
T ss_dssp EEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSC--SCEEEEEEEEEETHHHHHHHT
T ss_pred EEEECCEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC--CCCEEEEEEEECCHHHHHHHC
T ss_conf 899898775899999999999986659998789999799956878999999998548--885699863223056789872
Q ss_pred CCC--CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 110--001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 SNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 ad~--I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
+++ -++.|++.+-. |. + ..| + .-+..+.+.....++.+.+.+.+..++
T Consensus 162 G~kgkR~a~pns~iMI------Hq------------p---~~~--------~-~G~a~di~~~a~el~~~~~~l~~iya~ 211 (277)
T 1tg6_A 162 GTPGMRHSLPNSRIMI------HQ------------P---SGG--------A-RGQATDIAIQAEEIMKLKKQLYNIYAK 211 (277)
T ss_dssp SCTTCEEECTTCEEEE------CC------------C---CCC--------C-CSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEE------EC------------C---CCC--------C-CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6777103389987887------25------------8---657--------7-758999999999999999999999999
Q ss_pred CCCCCHHHHHHHHCCC-CCCHHHHHHCCCCCCCCCH
Q ss_conf 1499988998873498-2378899877980623898
Q gi|254780747|r 196 SRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQ 230 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g~-~~~~~~A~~~GLvD~ig~~ 230 (293)
+-|.+.+.+.+..+-. .++++||+++||||+|-+.
T Consensus 212 ~TG~~~e~I~~~m~rD~~msa~EA~eyGliD~Ii~~ 247 (277)
T 1tg6_A 212 HTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVH 247 (277)
T ss_dssp HHCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECSS
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
T ss_conf 879399999987506840659999983998789337
No 6
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=99.59 E-value=5.1e-15 Score=113.10 Aligned_cols=157 Identities=18% Similarity=0.181 Sum_probs=109.8
Q ss_pred EEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99976662386--9999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
+|-+.|+|.+. .+++..|......+ -+.|.|.||||||++..+..|++.|+.. +-||++.+.+.|+|.|.+|+++
T Consensus 41 iifl~g~Id~~~a~~ii~~Ll~L~~~~-~~~I~l~INS~GG~v~~g~aIyd~i~~~--~~~V~Tv~~G~aaS~as~Il~a 117 (215)
T 2f6i_A 41 IIYLTDEINKKTADELISQLLYLDNIN-HNDIKIYINSPGGSINEGLAILDIFNYI--KSDIQTISFGLVASMASVILAS 117 (215)
T ss_dssp EEEECSCBCHHHHHHHHHHHHHHHHHC-CSCEEEEEEECCBCHHHHHHHHHHHHHS--SSCEEEEEEEEECHHHHHHHHT
T ss_pred EEEECCEECHHHHHHHHHHHHHHHCCC-CCCEEEEEECCCCCHHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHHHHHC
T ss_conf 899898127899999999999975589-9785999989997688999999999866--9985999978850456888860
Q ss_pred CCC--CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 110--001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 SNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 ad~--I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
|++ .++.|++.+-.-... .+ ..|+. .++ +.....++.+.+.+.+..++
T Consensus 118 G~kg~R~~~pns~iMiHq~s------~~------------~~G~~-------~di-----~~~~~el~~~~~~i~~~~a~ 167 (215)
T 2f6i_A 118 GKKGKRKSLPNCRIMIHQPL------GN------------AFGHP-------QDI-----EIQTKEILYLKKLLYHYLSS 167 (215)
T ss_dssp SCTTCEEECTTCEEESSCTT------CS------------CC--------------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCEEEECCCC------CC------------CCCCH-------HHH-----HHHHHHHHHHHHHHHHHHHH
T ss_conf 78884683477569973687------67------------78875-------799-----99999999999999999998
Q ss_pred CCCCCHHHHHHHHCCCC-CCHHHHHHCCCCCCCCC
Q ss_conf 14999889988734982-37889987798062389
Q gi|254780747|r 196 SRNIPYDKTLVLSDGRI-WTGAEAKKVGLIDVVGG 229 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g~~-~~~~~A~~~GLvD~ig~ 229 (293)
.-|++.+++.+..+... ++|+||+++||||+|-+
T Consensus 168 ~tg~~~e~I~~~~~~d~~lsa~EA~e~GliD~Ii~ 202 (215)
T 2f6i_A 168 FTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIE 202 (215)
T ss_dssp HHCCCHHHHHHHHHTTCEECHHHHHHHTSCSEECC
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEECC
T ss_conf 82999999998715881504999998399869821
No 7
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 1yg8_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A*
Probab=99.55 E-value=3.7e-14 Score=107.68 Aligned_cols=158 Identities=18% Similarity=0.201 Sum_probs=117.2
Q ss_pred EEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99976662386--9999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
.|-+.|+|.+. ..++..+.....++.-+.|.|.||||||++..+..|+++|+.. +-||++.+.+.|+|.|-+|.++
T Consensus 28 iifl~~~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InSpGG~v~~gl~i~D~i~~~--~~~V~Tv~~G~aaS~a~lIl~~ 105 (193)
T 1yg6_A 28 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAASMGAFLLTA 105 (193)
T ss_dssp EEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHS--SSCEEEEEEEEEETHHHHHHHT
T ss_pred EEEECCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC--CCCEEEEEEHHHHHHHHHHHHC
T ss_conf 89889886468899999999999804999997999978996275799999998427--9999999824999899999975
Q ss_pred CC--CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11--0001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 SN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 ad--~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
++ +-|+.|++.+- .|. +..-..|+ ..+.+.....++.+.+.+.+..++
T Consensus 106 G~~g~R~~~pns~iM------iHq------------~s~~~~G~------------~~di~~~~~el~~~~~~i~~i~a~ 155 (193)
T 1yg6_A 106 GAKGKRFCLPNSRVM------IHQ------------PLGGYQGQ------------ATDIEIHAREILKVKGRMNELMAL 155 (193)
T ss_dssp SCTTCEEECTTCEEE------ECC------------CEEEEEEE------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCHHHH------HCC------------CCCCCCCC------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999974576653776------225------------66465754------------999999999999999999999999
Q ss_pred CCCCCHHHHHHHHCCC-CCCHHHHHHCCCCCCCCC
Q ss_conf 1499988998873498-237889987798062389
Q gi|254780747|r 196 SRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGG 229 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g~-~~~~~~A~~~GLvD~ig~ 229 (293)
+-|++.+++++..+.. .++|+||+++||||+|-+
T Consensus 156 ~tg~~~~~i~~~~~rd~~l~a~EAl~~GiiD~Ii~ 190 (193)
T 1yg6_A 156 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 190 (193)
T ss_dssp HHCCCHHHHHHHTSSCEEEEHHHHHHHTSSSEECC
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
T ss_conf 97939999998724783377999998099858935
No 8
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopeptidase, ATP-dependent protease, hydrolase; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=99.55 E-value=1.5e-14 Score=110.17 Aligned_cols=162 Identities=22% Similarity=0.257 Sum_probs=115.9
Q ss_pred EEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99976662386--9999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
+|-+.|+|.+. ..++..|.....++.-+-|.|.||||||++.++-.|+++|+.. +.||.+.+.+.|+|.|.+|+++
T Consensus 29 iifl~~~Id~~~a~~ii~~L~~L~~~~~~k~I~l~InS~GG~v~~glaI~d~i~~~--~~~V~ti~~G~aaS~aslIl~a 106 (208)
T 2cby_A 29 IIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLA--PCDIATYAMGMAASMGEFLLAA 106 (208)
T ss_dssp EEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHC--SSCEEEEEEEEEETHHHHHHHT
T ss_pred EEEECCEECHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC--CCCEEEEECCCCCCHHHHHHHC
T ss_conf 89989836789999999999997451889980788679988787899999999865--9987999636354389999867
Q ss_pred CC--CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11--0001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 SN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 ad--~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
|+ +.++.|++.+- .+....+ ..|.. .+.+.....++.+.+.+.+..++
T Consensus 107 G~kg~R~~~pns~iM------iHq~~~~------------~~G~~------------~di~~~a~el~~~~~~i~~iya~ 156 (208)
T 2cby_A 107 GTKGKRYALPHARIL------MHQPLGG------------VTGSA------------ADIAIQAEQFAVIKKEMFRLNAE 156 (208)
T ss_dssp SCTTCEEECTTCEEE------CCCC----------------------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCEEE------ECCCCCC------------CCCCH------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 898956887986278------8888736------------67777------------68999999999999999999999
Q ss_pred CCCCCHHHHHHHHCC-CCCCHHHHHHCCCCCCCCCHHHH
Q ss_conf 149998899887349-82378899877980623898999
Q gi|254780747|r 196 SRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDVVGGQEEV 233 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g-~~~~~~~A~~~GLvD~ig~~~~a 233 (293)
.-|.+.+.+.+..+. ..++++||+++||||+|-+..+.
T Consensus 157 ~Tg~~~e~I~~~~~rd~~lsa~EAl~yGliD~Ii~~~~~ 195 (208)
T 2cby_A 157 FTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRAHV 195 (208)
T ss_dssp HHCCCHHHHHHHHHTTCEEEHHHHHHHTSCSEECSCC--
T ss_pred HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCC
T ss_conf 979599999986068843459999984998798357989
No 9
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.55 E-value=2.7e-14 Score=108.57 Aligned_cols=162 Identities=20% Similarity=0.267 Sum_probs=111.5
Q ss_pred EEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99976662386--9999999998618998799997588888889999999999984147867996033233223210001
Q gi|254780747|r 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 40 ~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
.|-+.|+|.+. ..++..|.....++.-+-|.|.||||||++.+.-.|+++|+..+ -||.+.+.+.|+|.|-+|+++
T Consensus 47 iIfL~g~Id~~~a~~iia~Ll~l~~~d~~k~I~l~INS~GG~v~~glaI~D~m~~~~--~~V~Ti~~G~AaS~aslIl~a 124 (218)
T 1y7o_A 47 IIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIK--ADVQTIVMGMAASMGTVIASS 124 (218)
T ss_dssp EEEEESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHHSS--SCEEEEEEEEEETHHHHHHTT
T ss_pred EEEECCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC--CCEEEEEEEEECCHHHHHHHC
T ss_conf 899898986899999999999888519998789998289786878999999998569--987999962554435689871
Q ss_pred C--CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1--10001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 118 S--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 118 a--d~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
+ ++.|+.|++.+-.- .+ ..+ ..|.. ...+.+.....+....+.+.+..++
T Consensus 125 G~kg~R~~~pns~iMiH-----qp-~~~------------~~G~~----------~~~~~~~~~~el~~~~~~i~~i~a~ 176 (218)
T 1y7o_A 125 GAKGKRFMLPNAEYMIH-----QP-MGG------------TGGGT----------QQTDMAIAPEHLLKTRNTLEKILAE 176 (218)
T ss_dssp SCTTCEEECTTCEEECC-----CC-C------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECHHHHHHHC-----CC-CCC------------CCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 68884687455888837-----88-556------------55553----------1779999999999999999999998
Q ss_pred CCCCCHHHHHHHHCCC-CCCHHHHHHCCCCCCCCCHH
Q ss_conf 1499988998873498-23788998779806238989
Q gi|254780747|r 196 SRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQE 231 (293)
Q Consensus 196 ~R~~~~~~~~~~~~g~-~~~~~~A~~~GLvD~ig~~~ 231 (293)
.-|++.+++.+..+.. .++|++|+++||||+|-+..
T Consensus 177 ~Tg~~~~~I~~~~~rd~~lsa~EAleyGliD~Ii~~~ 213 (218)
T 1y7o_A 177 NSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANN 213 (218)
T ss_dssp HHTCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCCC
T ss_pred HHCCCHHHHHHHHCCCEEECHHHHHHCCCCCEECCCC
T ss_conf 8797999999862179065399999859986982468
No 10
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=99.15 E-value=2e-10 Score=84.19 Aligned_cols=162 Identities=15% Similarity=0.209 Sum_probs=105.3
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHH-------HHHHHHHHHHHHC-C
Q ss_conf 87289999766623----8---69999999998618998799997588----888889-------9999999999841-4
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAY-------AGEAIFRAIQKVK-N 95 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~-------~~~~i~~ai~~~k-~ 95 (293)
.+.|+.|.++-|-. + .+++.+.++.+. |+++++|||.=+. .|++.. ......+..+.++ .
T Consensus 28 ~~gV~~ItlnrP~~~Nal~~~m~~eL~~~l~~~~-d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~i~~~ 106 (264)
T 3he2_A 28 AEAVLTIELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDAS 106 (264)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHHC
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC-CCCCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 7999999974846468989999999999999701-899559999689985134545434443010358999999999858
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHH
Q ss_conf 78679960332332232100011100013013534555653021024567774204225531552112346667899998
Q gi|254780747|r 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 (293)
Q Consensus 96 ~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~ 175 (293)
+||+|+.+.+.|..||+.++++||.+++.+.+.++.-.+ ++|+-+. ...-
T Consensus 107 ~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~------------------~g~~ 156 (264)
T 3he2_A 107 PMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTS------------KYGLALD------------------NWSI 156 (264)
T ss_dssp SSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHH------------HHTCCCC------------------HHHH
T ss_pred CCCEEEEECCEEEHHHHHHHHHCCEEEEECCCCCCCCCC------------CEEECCC------------------HHHH
T ss_conf 998999977856448899998446665203444547401------------2300677------------------1688
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 87777766666778999985149998899-8873498237889987798062389899999999741877
Q gi|254780747|r 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 (293)
Q Consensus 176 ~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~~~~ 244 (293)
. .+.. .+..... +-+..|+.++|++|+++||||++...+++.+++.+++..+
T Consensus 157 ~-----------~l~~------~iG~~~a~~lll~g~~~~a~eA~~~GLv~~v~~~~e~~~~a~~la~~~ 209 (264)
T 3he2_A 157 R-----------RLSS------LVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADAQAWAAEIARLA 209 (264)
T ss_dssp H-----------HHHH------HHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECCHHHHHHHHHHHHTSC
T ss_pred H-----------HHHH------HCCCHHHHHHHHCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHHCC
T ss_conf 8-----------9999------819167789998389788899976894638546799999999998379
No 11
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomics, center for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=99.09 E-value=2.4e-10 Score=83.69 Aligned_cols=164 Identities=22% Similarity=0.314 Sum_probs=108.8
Q ss_pred CCCCCCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCHH------------HHHHH
Q ss_conf 567787289999766623----8---699999999986189987999975888-----88889------------99999
Q gi|254780747|r 31 VEDNSPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSSP-----GGSAY------------AGEAI 86 (293)
Q Consensus 31 ~~~~~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~Sp-----GG~~~------------~~~~i 86 (293)
.+...++|+.|.++-+=. + .+++.+.++.+.+|+++++|||.=..+ |+... .....
T Consensus 12 v~~~~~gi~~Itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~~f~~g~~~~~~~~~~~~~~~~~~~~~ 91 (265)
T 3kqf_A 12 VDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMI 91 (265)
T ss_dssp EECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHH
T ss_pred EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHHHHHHCCCCCCCCCHHHH
T ss_conf 96389988999976898789999999999999999986489956999965899613243125554200001100001356
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
...+..+. ..||+|+.+++.|..||..++++||.+++.+.+.++.-.+ ++|+-+.
T Consensus 92 ~~~~~~l~~~~kpvIaaV~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~~Gl~p~------------ 147 (265)
T 3kqf_A 92 RTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTET------------TLAIIPG------------ 147 (265)
T ss_dssp HHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCC------------
T ss_pred HHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHCCEEEECCCCEEECCCC------------CCCCCCC------------
T ss_conf 5799999968988899996689517889987378899769988988644------------8720888------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 666789999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
+.-- ..+ . |.+..... +-+..|+.+++++|+++||||++...+++.+.+.+++
T Consensus 148 ----~g~~--~~l-----------~------~~vG~~~a~~llltg~~~~a~ea~~~Glv~~vv~~~~l~~~a~~~a 201 (265)
T 3kqf_A 148 ----AGGT--QRL-----------P------RLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIA 201 (265)
T ss_dssp ----SSHH--HHH-----------H------HHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHH
T ss_pred ----CCHH--HHH-----------H------HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHH
T ss_conf ----4288--870-----------8------8732999999998488678899997499767668789999999999
No 12
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.06 E-value=1.2e-09 Score=79.32 Aligned_cols=157 Identities=19% Similarity=0.223 Sum_probs=103.3
Q ss_pred CCCEEEEEEEEEE-----ECC---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHH---------------HHH
Q ss_conf 7872899997666-----238---6999999999861899879999758----888888999---------------999
Q gi|254780747|r 34 NSPHVARIAIRGQ-----IED---SQELIERIERISRDDSATALIVSLS----SPGGSAYAG---------------EAI 86 (293)
Q Consensus 34 ~~~~i~~i~i~G~-----I~~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~---------------~~i 86 (293)
-++.|+.|.++-+ -.+ -+++.+.++.+.+|+++++|||.=+ |-|++.... .+.
T Consensus 13 ~e~gIa~itln~~p~~~Nal~~~~~~el~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 92 (715)
T 1wdk_A 13 LESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEA 92 (715)
T ss_dssp CGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHH
T ss_pred ECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 41988999989899667798999999999999999748897699998889971658098989635578867888767899
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+.++. .+||+|+.+++.|..||.-+|++||.+++.+++.+|.--+ |+|+-+.
T Consensus 93 ~~~~~~i~~~~~PvIAai~G~a~GgG~elalacD~ria~~~a~f~~pev------------~lGl~p~------------ 148 (715)
T 1wdk_A 93 NKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEV------------KLGIYPG------------ 148 (715)
T ss_dssp HHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGG------------GGTCCCC------------
T ss_pred HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEEEECCCEEECHHH------------HHCCCCC------------
T ss_conf 9999999849998999978633299999999789999829989988677------------6388888------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 6667899998877777666667789999851499988-99887349823788998779806238989999999
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l 237 (293)
+.-- ..+. .. +... ..+-+..|+.+++++|+++||||++...++....+
T Consensus 149 ----~gg~--~~l~-----------r~------iG~~~a~~l~ltg~~~~a~eA~~~Glvd~vv~~~~l~~~a 198 (715)
T 1wdk_A 149 ----FGGT--VRLP-----------RL------IGVDNAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAA 198 (715)
T ss_dssp ----SSHH--HHHH-----------HH------HCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHH
T ss_pred ----CCCC--EECH-----------HH------CCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf ----7744--5510-----------10------2436788863023340499999859974248888999999
No 13
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=99.05 E-value=2e-09 Score=77.94 Aligned_cols=161 Identities=22% Similarity=0.294 Sum_probs=104.1
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHH-----------------HHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----8888899-----------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYA-----------------GEAI 86 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~-----------------~~~i 86 (293)
++.|+.|.++.+=. + .+++.+.++.+.+|++++.|||.=+. .|++... ...+
T Consensus 10 ~dgVa~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~vvvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 89 (269)
T 1nzy_A 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWW 89 (269)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 89999999748987789899999999999999985889169999799986357864887641345431156788888889
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+..+. ..||+++.+.+.|..||..++++||.+++.+.+.++.-- -++|+-+.
T Consensus 90 ~~~~~~i~~~~kp~Iaav~G~a~GgG~~lal~~D~ria~~~a~f~~~~------------~~~g~~p~------------ 145 (269)
T 1nzy_A 90 HQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW------------HTIGIGND------------ 145 (269)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCH------------HHHTCCCC------------
T ss_pred HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHCCCHHHHHHHHCCCCCC------------CEEECCCC------------
T ss_conf 999999996899999973302056405655412144564530114765------------42621578------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 6667899998877777666667789999851499988998873498237889987798062389899999999741
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
.... ..+. ..+...+ ..+-+..|+.|+|++|+++||||++...+++.+++.+.+
T Consensus 146 ----~g~~--~~l~-----------~~iG~~~-----a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a 199 (269)
T 1nzy_A 146 ----TATS--YSLA-----------RIVGMRR-----AMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVA 199 (269)
T ss_dssp ----TTHH--HHHH-----------HHHHHHH-----HHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHH
T ss_pred ----CCHH--HHHH-----------HHCCHHH-----HHCCCCCCCCCCHHHHHHHCCCCEECCHHHHHHHHHHHH
T ss_conf ----2389--9999-----------9809465-----312023489887999998099887548689999999999
No 14
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=99.04 E-value=4e-09 Score=75.99 Aligned_cols=159 Identities=20% Similarity=0.168 Sum_probs=106.9
Q ss_pred CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCH--------------HH----HHHH
Q ss_conf 872899997666238------69999999998618998799997588----88888--------------99----9999
Q gi|254780747|r 35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSS----PGGSA--------------YA----GEAI 86 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~--------------~~----~~~i 86 (293)
++.|+.|.++.+-.+ .+++.+.++.+.+|+++++|||+=.. -|++. .. ....
T Consensus 14 ~dgVa~itlnrp~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 93 (263)
T 3l3s_A 14 SEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEAC 93 (263)
T ss_dssp SSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 29999999678665899999999999999999758895699997899985867520213344445420024678999999
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+.++. ..||+++.+.+.|..||.-+|++||.+++.+.+.++.-.. + +|+.
T Consensus 94 ~~~~~~~~~~~kpvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~p~~-------~-----~g~~-------------- 147 (263)
T 3l3s_A 94 SALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGV-------Q-----NGGF-------------- 147 (263)
T ss_dssp HHHHHHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTT-------T-----TTSC--------------
T ss_pred HHHHHHHHHCCCCEEEEECCCEECCCHHHHHCCCCCEECCCCEECCCCC-------E-----EECC--------------
T ss_conf 9999999867998899845807614163454223322210241216422-------0-----6115--------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 6667899998877777666667789999851499988998-873498237889987798062389899999999741
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
+. ....+ . .|.+...... -+..|+.+++++|+++||||++...++..+.+.+.+
T Consensus 148 ------~~-----------~~~~~---l--~r~ig~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a 202 (263)
T 3l3s_A 148 ------CT-----------TPAVA---V--SRVIGRRAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLA 202 (263)
T ss_dssp ------CH-----------HHHHH---H--HTTSCHHHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHH
T ss_pred ------CC-----------CCCCH---H--HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHH
T ss_conf ------10-----------13310---2--33454666654226588668999998699638628889999999999
No 15
>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=99.03 E-value=1.4e-09 Score=78.88 Aligned_cols=160 Identities=14% Similarity=0.169 Sum_probs=101.1
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC-----------CCCCHHHH-------------
Q ss_conf 87289999766623----8---69999999998618998799997588-----------88888999-------------
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS-----------PGGSAYAG------------- 83 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S-----------pGG~~~~~------------- 83 (293)
++.|+.|.++-+=. + .+++.+.++.+.+|++++.|||.=+. .|++....
T Consensus 44 ddgVa~ItLNrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~~~~~~sgG~~FcaG~Dl~~~~~~~~~~~~~~~~ 123 (314)
T 1q52_A 44 DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTA 123 (314)
T ss_dssp SSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC------------------
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
T ss_conf 39989999558775689899999999999999974999758999578876655210233476756653124443333420
Q ss_pred ----------HHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf ----------99999999841-478679960332332232100011100013013-534555653021024567774204
Q gi|254780747|r 84 ----------EAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETS-LVGSIGVLFQYPYVKPFLDKLGVS 151 (293)
Q Consensus 84 ----------~~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s-~vGsiGv~~~~~~~~~ll~k~gi~ 151 (293)
..+.+..+.+. ..||||+.+++.|..||..++++||-+++.+.+ .++.-. -++|+-
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ias~~a~~f~~pe------------~~lGl~ 191 (314)
T 1q52_A 124 DTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTD------------ADVGSF 191 (314)
T ss_dssp -----------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCG------------GGGTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHCCCHHHHHHHHHHHHHH------------CCCCCC
T ss_conf 12667888889999999999858998899983766102138876123112100377766444------------045878
Q ss_pred CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCH
Q ss_conf 2255315521123466678999988777776666677899998514999889-988734982378899877980623898
Q gi|254780747|r 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 (293)
Q Consensus 152 ~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~ 230 (293)
+. -..+. . +... +.... .+-+..|+.+++++|+++||||++...
T Consensus 192 p~--------------~g~~~----~-----------L~~~------vG~~~A~~llltg~~i~a~eA~~~Glv~~vv~~ 236 (314)
T 1q52_A 192 DG--------------GYGSA----Y-----------LARQ------VGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEH 236 (314)
T ss_dssp CC--------------STTTH----H-----------HHHH------HCHHHHHHHHHHCCEECHHHHHHHTSCSEEECG
T ss_pred CC--------------CCHHH----H-----------HHHH------HHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCH
T ss_conf 88--------------50699----9-----------9998------569999999985898888897307832796387
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999999741
Q gi|254780747|r 231 EEVWQSLYALG 241 (293)
Q Consensus 231 ~~a~~~l~~~~ 241 (293)
++....+.+.+
T Consensus 237 ~el~~~a~~~a 247 (314)
T 1q52_A 237 AELETVGLQWA 247 (314)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 89999999999
No 16
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=99.03 E-value=3e-09 Score=76.81 Aligned_cols=160 Identities=17% Similarity=0.280 Sum_probs=104.3
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHHH------------HH-HHH-
Q ss_conf 87289999766623----8---6999999999861899879999758----8888889999------------99-999-
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAGE------------AI-FRA- 89 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~~------------~i-~~a- 89 (293)
++.|+.|.++-|-. + .+++.+.++.+.+|++++.|||.=+ |.|++..... .. ...
T Consensus 16 ~~gi~~i~lnrP~~~Nal~~~~~~~l~~al~~~~~d~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 95 (276)
T 2j5i_A 16 EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREAS 95 (276)
T ss_dssp ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999999788886778899999999999999973999179999789886417887899864100221035666667778
Q ss_pred ---HHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf ---99841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 90 ---IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 90 ---i~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
...++ .+||+|+.+++.|..||.-++++||.++|.+.+.+|..-+ ++|+-+.
T Consensus 96 ~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~------------~~G~~p~------------ 151 (276)
T 2j5i_A 96 QWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEI------------NWGIPPG------------ 151 (276)
T ss_dssp HHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGG------------GGTCCCC------------
T ss_pred HHHHHHHHHCCCCEEEECCCCEEHHHHHHHHCCCHHEECCCCCEECCCC------------CCCCCCC------------
T ss_conf 8899999978998999469945004348775344100678884003323------------2324886------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 666789999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
...+ ..+. |.+..... +-+..|+.++|++|++.||||++...+++.+.+.+.+
T Consensus 152 --~~~~----~~l~-----------------~~~g~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~el~~~a~~~a 205 (276)
T 2j5i_A 152 --NLVS----KAMA-----------------DTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELA 205 (276)
T ss_dssp --TTHH----HHHH-----------------HHSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHH
T ss_pred --CCHH----HHHH-----------------HHHCHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHH
T ss_conf --1179----9999-----------------9828145545530588787468997299347638126599999999
No 17
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=99.03 E-value=2.4e-09 Score=77.39 Aligned_cols=156 Identities=21% Similarity=0.227 Sum_probs=103.3
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHH--------------------
Q ss_conf 87289999766623----8---6999999999861899879999758----888888999--------------------
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAG-------------------- 83 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~-------------------- 83 (293)
+++|+.|.++.|=. + .+++.+.++.+.+|++|++|||.=+ |.|++....
T Consensus 42 ~~~Va~ItLnrP~~~Nals~~m~~el~~~l~~~~~d~~vrviVltG~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 121 (333)
T 3njd_A 42 TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSG 121 (333)
T ss_dssp ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 99999999767564789999999999999999972999459999789998558887688761232334554200011101
Q ss_pred ----------------------HHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCH
Q ss_conf ----------------------99999999841-4786799603323322321000111000130135345556530210
Q gi|254780747|r 84 ----------------------EAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 (293)
Q Consensus 84 ----------------------~~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~ 140 (293)
....+.+..+. ..||+|+.+.+.|..||..+|++||.++|.+.+.++. |.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lal~~D~ria~~~a~f~~-------pe 194 (333)
T 3njd_A 122 KTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGY-------PP 194 (333)
T ss_dssp HHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEEC-------GG
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCEECCCCCEEEECCCCEEEC-------CC
T ss_conf 45542035422345267899999999999999958998899978878624331103577799879988988-------70
Q ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHH
Q ss_conf 2456777420422553155211234666789999887777766666778999985149998899-887349823788998
Q gi|254780747|r 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAK 219 (293)
Q Consensus 141 ~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~ 219 (293)
-++|+-+ -.. . +... +..... +-+..|+.++|++|+
T Consensus 195 -----~~~G~~p--------------~~~-------~-----------l~r~------iG~~~A~~llltg~~i~A~eA~ 231 (333)
T 3njd_A 195 -----MRVWGVP--------------AAG-------L-----------WAHR------LGDQRAKRLLFTGDCITGAQAA 231 (333)
T ss_dssp -----GGTTCCC--------------TTC-------C-----------HHHH------HCHHHHHHHHTTCCEEEHHHHH
T ss_pred -----EEECCCC--------------CCC-------H-----------HHHH------HCHHHHHHHHHHCCCCHHHHHH
T ss_conf -----4412677--------------520-------5-----------6565------1579899998608830299999
Q ss_pred HCCCCCCCCCHHHHHHHHHHH
Q ss_conf 779806238989999999974
Q gi|254780747|r 220 KVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 220 ~~GLvD~ig~~~~a~~~l~~~ 240 (293)
++||||++...++..+.+.+.
T Consensus 232 ~~Glv~~vv~~~~l~~~a~~~ 252 (333)
T 3njd_A 232 EWGLAVEAPDPADLDARTERL 252 (333)
T ss_dssp HTTSSSBCCCGGGHHHHHHHH
T ss_pred HCCCEEEECCHHHHHHHHHHH
T ss_conf 879901962877899999999
No 18
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on protein structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=99.01 E-value=9.9e-10 Score=79.84 Aligned_cols=160 Identities=16% Similarity=0.211 Sum_probs=106.5
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHH-----------HHHHHHHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----8888899-----------9999999998
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYA-----------GEAIFRAIQK 92 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~-----------~~~i~~ai~~ 92 (293)
++.|+.|.++-|=. + ..++.+.++.+..|++++.|++.=+. -|++... ...+.+.+..
T Consensus 10 ~~~v~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~vvvl~g~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 89 (257)
T 2ej5_A 10 KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKA 89 (257)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99999999758987789999999999999999964989089999789988657776798642000135677666789998
Q ss_pred HC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf 41-47867996033233223210001110001301353455565302102456777420422553155211234666789
Q gi|254780747|r 93 VK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 (293)
Q Consensus 93 ~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s 171 (293)
+. ..||+|+.+++.|..||..+|++||.+++.+.+.+|.-.+ ++|+-+. +.
T Consensus 90 l~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gi~p~----------------~g 141 (257)
T 2ej5_A 90 LHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFI------------HVGLVPD----------------AG 141 (257)
T ss_dssp HHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCC----------------TT
T ss_pred HHCCCCCEEEEECCEEEHHHHHHHHHCCEEEECCCCEEECHHH------------CCCCCCC----------------CC
T ss_conf 7536995999978846468899998506898368878983432------------6186886----------------03
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99988777776666677899998514999889-98873498237889987798062389899999999741
Q gi|254780747|r 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 172 ~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
. -..+. .. +.... .+-+..|+.+++++|++.||||++...+++.....+..
T Consensus 142 ~--~~~l~-----------~~------~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~~~~ 193 (257)
T 2ej5_A 142 H--LYYLP-----------RL------VGRAKALELAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFA 193 (257)
T ss_dssp H--HHHHH-----------HH------HCHHHHHHHHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHH
T ss_pred H--HHHHH-----------HH------HCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHH
T ss_conf 9--99999-----------99------57402667864179898889987896389728789999999999
No 19
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.14.1.3
Probab=99.01 E-value=1.2e-09 Score=79.23 Aligned_cols=162 Identities=22% Similarity=0.246 Sum_probs=105.0
Q ss_pred CCCCCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHHH--------------HHH
Q ss_conf 677872899997666238------6999999999861899879999758----8888889999--------------999
Q gi|254780747|r 32 EDNSPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLS----SPGGSAYAGE--------------AIF 87 (293)
Q Consensus 32 ~~~~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~~--------------~i~ 87 (293)
..+.+.|+.|.++..-.+ .+++.+.++.+..|++|++|||.=+ |.|++..... .+.
T Consensus 15 ~~~~~gV~~itlrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~ 94 (264)
T 1wz8_A 15 AWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEAR 94 (264)
T ss_dssp EEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98289689999899987888999999999999998668998699997899984389975202554334778888899999
Q ss_pred HHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 9999841-478679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r 88 RAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 88 ~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
+.+..+. ..||+|+.+++.|..||..+|++||.+++.+++.++.-. -++|+-+.
T Consensus 95 ~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe------------~~~G~~p~------------- 149 (264)
T 1wz8_A 95 DLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGH------------LRLGVAAG------------- 149 (264)
T ss_dssp HHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCH------------HHHTSCCT-------------
T ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCC------------CCCCCCCC-------------
T ss_conf 99999997899899997484052888999864403011555432532------------11177888-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 66789999887777766666778999985149998899-887349823788998779806238989999999974
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
+.-- ..+ ...+ ..... +-+..|+.++|++|+++||||++...+++.+++.+.
T Consensus 150 ---~g~~--~~l-----------~~~~------G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~ 202 (264)
T 1wz8_A 150 ---DHAV--LLW-----------PLLV------GMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEV 202 (264)
T ss_dssp ---TTHH--HHT-----------HHHH------CHHHHHHHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHH
T ss_pred ---CCHH--HHH-----------HHHH------HHHHHHHHHHCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHH
T ss_conf ---4278--999-----------9999------888999999809962699999849964752878998999999
No 20
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula 19L} PDB: 2q34_A 2q2x_A
Probab=99.00 E-value=2.3e-09 Score=77.56 Aligned_cols=160 Identities=14% Similarity=0.171 Sum_probs=105.8
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHHHHH-------HHHHHHHC-C
Q ss_conf 87289999766623----8---6999999999861899879999758----888888999999-------99999841-4
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAGEAI-------FRAIQKVK-N 95 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~~~i-------~~ai~~~k-~ 95 (293)
++.|+.|.++-+=. + .+++.+.++.+.+|++++.|+|.=+ |.|++....... .+....+. .
T Consensus 10 ~dgv~~itlnrp~~~Nal~~~~~~el~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 89 (243)
T 2q35_A 10 GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGLILDC 89 (243)
T ss_dssp ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCCCCCCCHHHHHTC
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 39899999868886789899999999999999976989679999788984479884454420221137899999999848
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHH
Q ss_conf 78679960332332232100011100013013534555653021024567774204225531552112346667899998
Q gi|254780747|r 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 (293)
Q Consensus 96 ~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~ 175 (293)
+||+++.+++.|..+|..+|++||.+++.+.+.++.-.+ ++|+.+. ..-.
T Consensus 90 ~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~----------------~~~~-- 139 (243)
T 2q35_A 90 EIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFM------------KYGFTPV----------------GATS-- 139 (243)
T ss_dssp CSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHH------------HHTSCCC----------------SSHH--
T ss_pred CCCEEEEECCEEEECCCHHCCCCCEEEECCCCEECCCCC------------CCCCCCC----------------CCCC--
T ss_conf 998999968857716662020466787524343316500------------3145556----------------7641--
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 8777776666677899998514999889-98873498237889987798062389899999999741
Q gi|254780747|r 176 QMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 176 ~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
..+ ...| .... .+-+..|+.++|++|+++||||++...++..+.+.+++
T Consensus 140 ~~l-----------~~~i------G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~la 189 (243)
T 2q35_A 140 LIL-----------REKL------GSELAQEMIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLG 189 (243)
T ss_dssp HHH-----------HHHH------CHHHHHHHHHHCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHH
T ss_pred EEC-----------CCCC------CHHHHHHHHHCCCCCCHHHHHHCCCCEECCCHHHHHHHHHHHH
T ss_conf 121-----------2234------5388877650389898999997799407088578999999999
No 21
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=99.00 E-value=1.5e-09 Score=78.70 Aligned_cols=159 Identities=18% Similarity=0.244 Sum_probs=102.2
Q ss_pred CCCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCH--------HHH----HHHHHHH
Q ss_conf 7872899997666238------699999999986189987999975888-----8888--------999----9999999
Q gi|254780747|r 34 NSPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSSP-----GGSA--------YAG----EAIFRAI 90 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~Sp-----GG~~--------~~~----~~i~~ai 90 (293)
..+.|++|.++-|=.+ .+++.+.++.+.+|+++++|||.=+.+ |++. ... ..+.+.+
T Consensus 11 ~~~GVa~ItlnrP~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 1sg4_A 11 AGAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELW 90 (260)
T ss_dssp TTTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 89988999987887688999999999999999985899559999828999452899765542101001222125678999
Q ss_pred HHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH--HHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 9841-4786799603323322321000111000130135--345556530210245677742042255315521123466
Q gi|254780747|r 91 QKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSL--VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 (293)
Q Consensus 91 ~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~--vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~ 167 (293)
..+. .+||+|+.+++.|..+|.-+|++||.+++.+++. +|. |.. ++|+-+.
T Consensus 91 ~~i~~~~kpvIa~v~G~a~GgG~~la~~~D~ria~~~ak~~~~~-------pe~-----~~Gl~p~-------------- 144 (260)
T 1sg4_A 91 LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGL-------NET-----QLGIIAP-------------- 144 (260)
T ss_dssp HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSC-------CGG-----GGTCCCC--------------
T ss_pred HHHHCCCCCEEEEECCCEECCCCHHHCCCCEEEECCCCCCCCCC-------CCC-----CCCCCCC--------------
T ss_conf 99755899789985673105631111023323422223221113-------223-----4486788--------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 67899998877777666667789999851499988-9988734982378899877980623898999999997
Q gi|254780747|r 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 168 ~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
.-.-..+ ...+ ... ..+-+..|+.+++++|+++||||++...++...++.+
T Consensus 145 ----~g~~~~l-----------~~~i------G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 196 (260)
T 1sg4_A 145 ----FWLKDTL-----------ENTI------GHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALS 196 (260)
T ss_dssp ----HHHHHHH-----------HHHH------CHHHHHHHHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHH
T ss_pred ----HHHHHHH-----------HHHC------CHHHHHHHHHHCCCCCHHHHHHCCCCEEECCHHHHHHHHHH
T ss_conf ----1045557-----------7760------89999999982898870677547840464886789999999
No 22
>2x58_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, lyase, isomerase, peroxisome; HET: ADP COA; 2.80A {Rattus norvegicus}
Probab=98.99 E-value=3.9e-09 Score=76.11 Aligned_cols=162 Identities=19% Similarity=0.289 Sum_probs=105.8
Q ss_pred CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHH------HHHHHHHHHHHHC-CCC
Q ss_conf 872899997666238------69999999998618998799997588----888889------9999999999841-478
Q gi|254780747|r 35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSS----PGGSAY------AGEAIFRAIQKVK-NRK 97 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~------~~~~i~~ai~~~k-~~k 97 (293)
+++|++|.++-+-.+ .+++.+.++.+.+|+.+++|||.=.. .|++.. ....+.+.++++. ..|
T Consensus 13 ~~~ia~itln~P~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~i~~~~k 92 (727)
T 2x58_A 13 PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDEIQRYQK 92 (727)
T ss_dssp GGGEEEEEECCTTTTCBCHHHHHHHHHHHHHHHSCTTCCEEEEEESTTCSBCCBCGGGCSSSCSCSHHHHHHHHHHTCSS
T ss_pred ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 69989999788864789999999999999998648997699998989975568085756535905799999999994999
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf 67996033233223210001110001301353455565302102456777420422553155211234666789999887
Q gi|254780747|r 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 (293)
Q Consensus 98 pvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~ 177 (293)
|+|+.+++.|..||.-+|++||.+++.+.+.+|.--+ ++|+-+. ..- ...
T Consensus 93 PvIaav~G~a~GgG~elalacD~ria~~~a~~g~pev------------~lGl~p~----------------~gg--t~~ 142 (727)
T 2x58_A 93 PVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEV------------TLGILPG----------------ARG--TQL 142 (727)
T ss_dssp CEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCT----------------TTH--HHH
T ss_pred CEEEEECCHHHHHHHHHHHHCCEEEECCCCEEECCCC------------CCCCCCC----------------CCH--HHH
T ss_conf 8999988453299999999659899759979988300------------5161886----------------169--999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCC---HHHHHHHHHHHCC
Q ss_conf 7777666667789999851499988998873498237889987798062389---8999999997418
Q gi|254780747|r 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG---QEEVWQSLYALGV 242 (293)
Q Consensus 178 ~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~---~~~a~~~l~~~~~ 242 (293)
+. ..+ |. ....+-+..|+.+++++|++.||||++.. .+++++.+.+.+.
T Consensus 143 l~-----------r~i----G~-~~a~~l~l~g~~~~a~~A~~~Glvd~v~~~~~~~~a~~~A~~ia~ 194 (727)
T 2x58_A 143 LP-----------RVV----GV-PVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIKFAQKIID 194 (727)
T ss_dssp HH-----------HHH----CH-HHHHHHHHHCCEEEHHHHHTTTSCSEEESSCHHHHHHHHHHHHTT
T ss_pred HH-----------HHC----CH-HHHHHHHHCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHHHHHHC
T ss_conf 98-----------852----57-789998753787878999865997176475007999999999965
No 23
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=98.98 E-value=1.4e-09 Score=78.91 Aligned_cols=161 Identities=20% Similarity=0.278 Sum_probs=105.6
Q ss_pred CCCCEEEEEEEEEEE----CC---HHHHHHHHHHHHCCCCCCEEEEECCCC----CCCHHH----------HHHHHHHHH
Q ss_conf 778728999976662----38---699999999986189987999975888----888899----------999999999
Q gi|254780747|r 33 DNSPHVARIAIRGQI----ED---SQELIERIERISRDDSATALIVSLSSP----GGSAYA----------GEAIFRAIQ 91 (293)
Q Consensus 33 ~~~~~i~~i~i~G~I----~~---~~~l~~~l~~a~~d~~ik~ivL~i~Sp----GG~~~~----------~~~i~~ai~ 91 (293)
.+.+.|+.|.++-+= .+ .+++.+.++.+.+|+++++|||.=+.+ ||.... ...+.....
T Consensus 15 ~~~~Gi~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~ 94 (263)
T 3moy_A 15 RPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWD 94 (263)
T ss_dssp CCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHH
T ss_pred ECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCHH
T ss_conf 54897899998489877898999999999999987328981699986785454167633542035631022201210023
Q ss_pred HHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 841-4786799603323322321000111000130135345556530210245677742042255315521123466678
Q gi|254780747|r 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 (293)
Q Consensus 92 ~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~ 170 (293)
.+. ..||+|+.+++.|..||..+|++||.+++.+.+.++.--+ ++|+-+. -..
T Consensus 95 ~~~~~~kPvIa~i~G~a~GgG~~lal~cD~ria~~~a~f~~pe~------------~~Gl~p~--------------~g~ 148 (263)
T 3moy_A 95 SLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEI------------TLGILPG--------------LGG 148 (263)
T ss_dssp HHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGG------------GGTCCCS--------------SST
T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHCCEEEEECCCEEECCCC------------CCCCCCC--------------CCH
T ss_conf 43049997999988615399999999789999829989989641------------8065855--------------028
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999988777776666677899998514999889-9887349823788998779806238989999999974
Q gi|254780747|r 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 171 s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
+ ..+. ..| .... .+-+..|+.|++++|+++||||++...++......+.
T Consensus 149 ~----~~l~-----------~~v------g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~el~~~a~~~ 198 (263)
T 3moy_A 149 T----QRLT-----------RAV------GKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAV 198 (263)
T ss_dssp T----THHH-----------HHH------CHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHH
T ss_pred H----HHHH-----------HHH------HHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHHHHHHH
T ss_conf 9----9999-----------985------299999999829978899999879967950420005899999
No 24
>3h02_A Naphthoate synthase; IDP00995, lyase, structural genomics, center for structural genomics of infectious diseases, csgid; 2.15A {Salmonella typhimurium}
Probab=98.98 E-value=1.3e-09 Score=79.04 Aligned_cols=160 Identities=19% Similarity=0.283 Sum_probs=104.0
Q ss_pred CCCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCHHHHH--------------HHH
Q ss_conf 787289999766623----8---699999999986189987999975888-----88889999--------------999
Q gi|254780747|r 34 NSPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSSP-----GGSAYAGE--------------AIF 87 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~Sp-----GG~~~~~~--------------~i~ 87 (293)
..+.|+.|.++.+=. + .+++.+.++++.+|+++++|||.=+.+ |+...... ...
T Consensus 33 ~~dgVa~ItlnrP~~~Nals~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~d~~~~~~~~~~~~~~~~~~~~~~ 112 (288)
T 3h02_A 33 STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVL 112 (288)
T ss_dssp ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCC---------------CCCTHH
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 58958999984735367999999999999999997399966899987999742346307766432544201456553236
Q ss_pred HHHHHH-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 999984-1478679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r 88 RAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 88 ~ai~~~-k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
+.+..+ ...||||+.+++.|..||..++++||.+++.+.+.+|.-.+ ++|+-+.
T Consensus 113 ~l~~~l~~~~kPvIaav~G~a~GgG~~la~~cD~~ia~~~a~f~~pe~------------~~Gl~p~------------- 167 (288)
T 3h02_A 113 DFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGP------------KVGSFDG------------- 167 (288)
T ss_dssp HHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCC-------------
T ss_pred HHHHHHHHCCCCEEEEECCEEEEHHHHHHHHCCEEECCCCCEEECHHH------------HHCCCCC-------------
T ss_conf 899999709998999988987506389987357104169858987244------------2176786-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 66789999887777766666778999985149998899-887349823788998779806238989999999974
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
. -.-..+. .. +..... +-+..|+.++|++|+++||||++...++..+.+.+.
T Consensus 168 ---~--~~~~~l~-----------~~------ig~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~ 220 (288)
T 3h02_A 168 ---G--WGASYMA-----------RI------VGQKKAREIWFLCRQYDAQQALDMGLVNTVVPLADLEKETVRW 220 (288)
T ss_dssp ---S--HHHHHHH-----------HH------HCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHH
T ss_pred ---H--HHHHHHH-----------HH------HCHHHHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHH
T ss_conf ---6--5899999-----------98------4899999999759841599999889987854636669999999
No 25
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics, protein structure initiative; 1.58A {Legionella pneumophila subsp}
Probab=98.98 E-value=4.1e-09 Score=75.93 Aligned_cols=157 Identities=15% Similarity=0.216 Sum_probs=102.6
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHH---------------HHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----888889999---------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYAGE---------------AIFR 88 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~~---------------~i~~ 88 (293)
++.|++|.++-+=. + .+++.+.++.+.+|+++++|||.=+. -|++..... .+.+
T Consensus 11 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~ 90 (268)
T 3i47_A 11 QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGN 90 (268)
T ss_dssp ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999768886799999999999999999974999069999167776335641554311122210000246788999
Q ss_pred HHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 999841-4786799603323322321000111000130135345556530210245677742042255315521123466
Q gi|254780747|r 89 AIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 (293)
Q Consensus 89 ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~ 167 (293)
.+..+. ..||+++.+.+.|..||.-++++||.+++.+++.+|.-.+ ++|+.+.
T Consensus 91 ~~~~~~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~------------~~G~~p~-------------- 144 (268)
T 3i47_A 91 LMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEV------------KLGLIPA-------------- 144 (268)
T ss_dssp HHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCT--------------
T ss_pred HHHHHHHCCCCEEEEECCEEEECCCHHHCCCCEEECCCCCEEECCEE------------EEEECCC--------------
T ss_conf 99999848987899967858505521110442456279979987424------------5664576--------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 67899998877777666667789999851499988-9988734982378899877980623898999999997
Q gi|254780747|r 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 168 ~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
+. ...+...+ ... ..+-+..|+.++|++|++.||||++...++..+++.+
T Consensus 145 --~~--------------~~~~~~~i------g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 195 (268)
T 3i47_A 145 --VI--------------SPYVVRAI------GERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLK 195 (268)
T ss_dssp --TT--------------HHHHHHHH------CHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHH
T ss_pred --CC--------------HHHHCHHH------HHHHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHHHHHHH
T ss_conf --42--------------13222034------56678998760897888999777981086084799999999
No 26
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=98.98 E-value=6.2e-09 Score=74.80 Aligned_cols=160 Identities=18% Similarity=0.200 Sum_probs=106.8
Q ss_pred CCCEEEEEEEEEEE----CC---HHHHHHHHHHHHCCCCCCEEEEECC-----CCCCCHHHH-------------HHHHH
Q ss_conf 78728999976662----38---6999999999861899879999758-----888888999-------------99999
Q gi|254780747|r 34 NSPHVARIAIRGQI----ED---SQELIERIERISRDDSATALIVSLS-----SPGGSAYAG-------------EAIFR 88 (293)
Q Consensus 34 ~~~~i~~i~i~G~I----~~---~~~l~~~l~~a~~d~~ik~ivL~i~-----SpGG~~~~~-------------~~i~~ 88 (293)
.+++|++|.++-+= .+ .+++.+.++.+.+|++++.|||.=. |.|++.... ..+.+
T Consensus 6 ~~d~I~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~ 85 (250)
T 2a7k_A 6 NSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVID 85 (250)
T ss_dssp EETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHH
T ss_pred ECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 36989999974888679999999999999999996399964999982899966588763333322330568999988999
Q ss_pred HHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 999841-4786799603323322321000111000130135345556530210245677742042255315521123466
Q gi|254780747|r 89 AIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 (293)
Q Consensus 89 ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~ 167 (293)
.+..+. ..||+|+.+.+.|..||.-++++||.+++.+.+.++. |.. ++|+-+.
T Consensus 86 ~~~~i~~~~kpvIaai~G~a~GgG~~lal~~D~ria~~~a~f~~-------pe~-----~~Gl~p~-------------- 139 (250)
T 2a7k_A 86 LYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVM-------PEL-----KHGIGCS-------------- 139 (250)
T ss_dssp HHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEEC-------CGG-----GGTCCCH--------------
T ss_pred HHHHHHHCCCCEEEEECCEEECCCCHHHHCCCCCCCCCCCEEEE-------ECC-----CEEECCC--------------
T ss_conf 99999967987488667627426443232245452341427764-------035-----5525576--------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 6789999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 168 ~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
-.-..+. . .+..... +-+..|+.|+|++|++.||||++...++..+.+.+.+
T Consensus 140 -----~g~~~l~-----------~------~iG~~~a~~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a 192 (250)
T 2a7k_A 140 -----VGAAILG-----------F------THGFSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQA 192 (250)
T ss_dssp -----HHHHHHH-----------H------HHCHHHHHHHHHHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHH
T ss_pred -----HHHHHHH-----------H------HHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHH
T ss_conf -----1687898-----------8------733999999998399006899998099777768479999999999
No 27
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=98.98 E-value=4.2e-09 Score=75.87 Aligned_cols=156 Identities=19% Similarity=0.199 Sum_probs=103.0
Q ss_pred CCCCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHH-----------------
Q ss_conf 7787289999766623----8---69999999998618998799997588----888889999-----------------
Q gi|254780747|r 33 DNSPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYAGE----------------- 84 (293)
Q Consensus 33 ~~~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~~----------------- 84 (293)
..+++|+.|.++-|=. + .+++.+.++++.+|+++++|||.=+. -|++.....
T Consensus 9 ~~~~~V~~ItlnrP~~~Nals~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~ 88 (275)
T 1dci_A 9 SAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWY 88 (275)
T ss_dssp EEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHH
T ss_pred ECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 72698899998389878999999999999999999758996799996789874166438887401134542100025677
Q ss_pred ------HHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEE
Q ss_conf ------9999999841-478679960332332232100011100013013534555653021024567774204225531
Q gi|254780747|r 85 ------AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 (293)
Q Consensus 85 ------~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~ 157 (293)
...+.+..+. ..||||+.+++.|..||..+|++||.+++.+.+.++. |. -++|+-+..
T Consensus 89 ~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~ria~~~a~f~~-------pe-----~~~Gl~p~~--- 153 (275)
T 1dci_A 89 LRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQV-------KE-----VDVGLAADV--- 153 (275)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEEC-------CG-----GGGTSCCCS---
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHHHHCCCEEEECCCCCEEC-------CC-----EEECCCCCC---
T ss_conf 888899999999999738998999988962306489875446511047872236-------32-----146456465---
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHH
Q ss_conf 55211234666789999887777766666778999985149998899-887349823788998779806238989999
Q gi|254780747|r 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 (293)
Q Consensus 158 g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~ 234 (293)
..- . ....+-...... .-+..|+.++|++|++.||||++...++..
T Consensus 154 -------------g~~--~----------------~l~~~~g~~~~~~~ll~~g~~~~a~eA~~~Glv~~vv~~~~~~ 200 (275)
T 1dci_A 154 -------------GTL--Q----------------RLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVM 200 (275)
T ss_dssp -------------SHH--H----------------HGGGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHH
T ss_pred -------------CCH--H----------------HHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCEEEEECCHHHH
T ss_conf -------------627--7----------------8999852066656666215666877887689536971857887
No 28
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=98.98 E-value=2.4e-09 Score=77.35 Aligned_cols=159 Identities=17% Similarity=0.189 Sum_probs=103.6
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHH-----------HHHHHHHHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----888889-----------99999999998
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAY-----------AGEAIFRAIQK 92 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~-----------~~~~i~~ai~~ 92 (293)
++.|+.|.++-|=. + .+++.+.++.+.+|+.+++|||.=.. .|+... ........+..
T Consensus 7 ~dgi~~ItlnrP~~~Nals~~~~~~l~~al~~~~~d~~v~~vvl~~~g~~f~~g~dl~~~~~~~~~~~~~~~~~~~~~~~ 86 (254)
T 3gow_A 7 QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEA 86 (254)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 89999999768876789999999999999999976889389999678987565630565214523578999999999999
Q ss_pred HC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf 41-47867996033233223210001110001301353455565302102456777420422553155211234666789
Q gi|254780747|r 93 VK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 (293)
Q Consensus 93 ~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s 171 (293)
+. .+||+|+.+++.|..||..++++||..++.+.+.+|.-.+ ++|+.+. +.
T Consensus 87 l~~~~kPvIa~v~G~a~GgG~~la~~cD~ria~~~a~f~~pe~------------~~Gl~p~----------------~g 138 (254)
T 3gow_A 87 LSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFV------------RIGLVPD----------------SG 138 (254)
T ss_dssp HHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGG------------GGTCCCC----------------TT
T ss_pred HHHCCCCEEEEECCEEEHHHHHHHHCCCEEEECCCCEEECHHC------------CCCCCCC----------------CC
T ss_conf 9719998999987842125488775255158738878986110------------7576875----------------24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99988777776666677899998514999889-9887349823788998779806238989999999974
Q gi|254780747|r 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 172 ~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
- -..+.. .+.... .+-+..|+.|++++|++.||||++...+++.+.+.+.
T Consensus 139 ~--~~~l~~-----------------~vG~~~a~~~~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~~~~~ 189 (254)
T 3gow_A 139 L--SFLLPR-----------------LVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAEKLMEEALSL 189 (254)
T ss_dssp H--HHHHHH-----------------HHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHH
T ss_pred H--HHHHHH-----------------HHCHHHHHHHHHCCCEECHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 9--999999-----------------86766799998639532599999879979982736568888999
No 29
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=98.97 E-value=1.8e-09 Score=78.18 Aligned_cols=158 Identities=21% Similarity=0.280 Sum_probs=101.9
Q ss_pred CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCCC----CCCHH---------HHH----HHHHHHH
Q ss_conf 872899997666238------699999999986189987999975888----88889---------999----9999999
Q gi|254780747|r 35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSSP----GGSAY---------AGE----AIFRAIQ 91 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~Sp----GG~~~---------~~~----~i~~ai~ 91 (293)
+++|++|.++-+-.+ .+++.+.++++.+|++++.|||.=+.+ |++.. ... .....+.
T Consensus 13 ~~~i~~itlnrp~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 92 (261)
T 3pea_A 13 EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFE 92 (261)
T ss_dssp ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999889875889999999999999999868892899994899973588745554100011100012221246777
Q ss_pred HHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 841-4786799603323322321000111000130135345556530210245677742042255315521123466678
Q gi|254780747|r 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 (293)
Q Consensus 92 ~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~ 170 (293)
.+. ..||+|+.+.+.|..||.-+|++||.+++.+.+.++.-.+ ++|+-+. +
T Consensus 93 ~~~~~~~pvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~~Gl~p~----------------~ 144 (261)
T 3pea_A 93 RVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPEL------------TLGLIPG----------------F 144 (261)
T ss_dssp HHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCC----------------S
T ss_pred HHHHCCCCEEEEEEEEEEHHHHHHHHCCCEEEECCCCEEECCCC------------CCCCCCC----------------C
T ss_conf 76624786899994388628888775045599879998978731------------5676866----------------1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 99998877777666667789999851499988-9988734982378899877980623898999999997
Q gi|254780747|r 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 171 s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
.-- ..+. ..| ... ..+-+..|+.|++++|++.||||++...++..+++.+
T Consensus 145 g~~--~~l~-----------r~i------G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~~~~ 195 (261)
T 3pea_A 145 AGT--QRLP-----------RYV------GKAKACEMMLTSTPITGAEALKWGLVNGVFAEETFLDDTLK 195 (261)
T ss_dssp SHH--HHHH-----------HHH------CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHH
T ss_pred CHH--HHHH-----------HHH------CCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 399--9999-----------995------75523331221871449999864997767785899999999
No 30
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 2.00A {Acinetobacter baumannii atcc 17978}
Probab=98.96 E-value=1.1e-08 Score=73.20 Aligned_cols=152 Identities=18% Similarity=0.222 Sum_probs=99.1
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHHHH--------------HHHH
Q ss_conf 87289999766623----8---6999999999861899879999758----88888899999--------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAGEA--------------IFRA 89 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~~~--------------i~~a 89 (293)
++.|+.|.++-+=. + .+++.+.++.+.+|+++++|||.=+ |.|++...... ....
T Consensus 12 ~~~v~~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 3fdu_A 12 EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVL 91 (266)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 89999999758675789999999999999999975899469999789842515731666542001310344443258999
Q ss_pred HHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 99841-47867996033233223210001110001301353455565302102456777420422553155211234666
Q gi|254780747|r 90 IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 (293)
Q Consensus 90 i~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~ 168 (293)
+..+. .+||||+.+.+.|..||.-++++||.+++.+.+.++.--+ ++|+-+.
T Consensus 92 ~~~i~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~------------~~Gl~p~--------------- 144 (266)
T 3fdu_A 92 LKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFV------------SLGLSPE--------------- 144 (266)
T ss_dssp HHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTT------------TTTCCCC---------------
T ss_pred HHHHHHCCCCEEEEECCEEEECCCEEECCCCCCEECCCCEEECCHH------------HCCCCCC---------------
T ss_conf 9999977998799863847464523221523111147978978625------------3288821---------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHH
Q ss_conf 78999988777776666677899998514999889-988734982378899877980623898999
Q gi|254780747|r 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 (293)
Q Consensus 169 ~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a 233 (293)
.. .-..+. ..| .... .+-+..|+.+++++|+++||||++....+.
T Consensus 145 -~g--~~~~l~-----------~~i------G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~ 190 (266)
T 3fdu_A 145 -GG--ASQLLV-----------KQA------GYHKAAELLFTAKKFNAETALQAGLVNEIVEDAYA 190 (266)
T ss_dssp -TT--HHHHHH-----------HHH------CHHHHHHHHHHCCEECHHHHHHTTSCSEECSCHHH
T ss_pred -HH--HHHHHH-----------HHH------CCHHHHHHHCCCCEECHHHHHHCCCEEEECCCHHH
T ss_conf -10--789999-----------995------50265321105856228889778972277784899
No 31
>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=98.95 E-value=7.6e-09 Score=74.26 Aligned_cols=157 Identities=18% Similarity=0.264 Sum_probs=101.1
Q ss_pred CCCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCHHH----------------HHH
Q ss_conf 787289999766623----8---699999999986189987999975888-----888899----------------999
Q gi|254780747|r 34 NSPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSSP-----GGSAYA----------------GEA 85 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~Sp-----GG~~~~----------------~~~ 85 (293)
-++.|+.|.++-|=. + .+++.+.++++..|+++++|||.=+.+ |++... ...
T Consensus 10 ~~~~v~~itlnrP~~~Nals~~~~~el~~~l~~~~~d~~v~~vVl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~ 89 (263)
T 3lke_A 10 IQNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHV 89 (263)
T ss_dssp ECSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHH
T ss_pred EECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999975888668989999999999999985099957999963898641688621023200111115778888999
Q ss_pred HHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 999999841-4786799603323322321000111000130135345556530210245677742042255315521123
Q gi|254780747|r 86 IFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 (293)
Q Consensus 86 i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~ 164 (293)
+.+.+.++. .+||+|+.+.+.|..||..++++||.+++.+.+.++.--+ ++|+-+
T Consensus 90 ~~~~~~~l~~~pkPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~~G~~~------------ 145 (263)
T 3lke_A 90 LNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFH------------KMGISP------------ 145 (263)
T ss_dssp HHHHHHHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHH------------HHTCCC------------
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEECCCCEECCCCC------------EECCCC------------
T ss_conf 99999999839998999976835606548874020102246661426311------------465377------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCC-HHHHHHHH
Q ss_conf 466678999988777776666677899998514999889-98873498237889987798062389-89999999
Q gi|254780747|r 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSL 237 (293)
Q Consensus 165 ~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~-~~~a~~~l 237 (293)
++... ..+. .. +.... .+-+..|+.++|++|++.||||++.. .++..+.+
T Consensus 146 ----~~g~~--~~l~-----------r~------~G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~l~~~~ 197 (263)
T 3lke_A 146 ----DLGAS--YFLP-----------RI------IGYEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERV 197 (263)
T ss_dssp ----CTTHH--HHHH-----------HH------HCHHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHH
T ss_pred ----CCCHH--HHHH-----------HH------HHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCHHHHHHHH
T ss_conf ----82078--9999-----------99------76899999996599743314887797248739989999999
No 32
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metabolism, lipid metabolism, lyase; 1.80A {Mycobacterium tuberculosis}
Probab=98.95 E-value=2e-09 Score=77.90 Aligned_cols=159 Identities=23% Similarity=0.323 Sum_probs=103.4
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHH----------HHHHHHHHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----8888899----------99999999984
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYA----------GEAIFRAIQKV 93 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~----------~~~i~~ai~~~ 93 (293)
++.|++|.++-|=. + .+++.+.++++.+|++++.||+.=.. -|++... .....+.+.++
T Consensus 32 ~~~i~~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 111 (278)
T 3h81_A 32 DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKL 111 (278)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999999768886789999999999999999975888489999479874003675787652111121367888887775
Q ss_pred C-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCH
Q ss_conf 1-478679960332332232100011100013013534555653021024567774204225531552112346667899
Q gi|254780747|r 94 K-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 (293)
Q Consensus 94 k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~ 172 (293)
. ..||+|+.+.+.|..||.-++++||.+++.+.+.++.-.+ ++|+-+. +.-
T Consensus 112 ~~~~~PvIa~v~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~~Gl~p~----------------~g~ 163 (278)
T 3h81_A 112 AAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEI------------KLGVLPG----------------MGG 163 (278)
T ss_dssp HTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGG------------GGTCCCC----------------SSH
T ss_pred HCCCCCEEEEECCEECHHHHHHHHHCCEEEEECCCEEECCCC------------CCCCCCC----------------CCH
T ss_conf 348998999980727179899999789999839988978511------------8166864----------------139
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99887777766666778999985149998899-887349823788998779806238989999999974
Q gi|254780747|r 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 173 e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
- ..+ ... +..... +-+..|+.+++++|+++||||++...++...+..+.
T Consensus 164 ~--~~l-----------~r~------ig~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~~~~a~~~ 213 (278)
T 3h81_A 164 S--QRL-----------TRA------IGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARAT 213 (278)
T ss_dssp H--HHH-----------HHH------HCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHH
T ss_pred H--HHH-----------HHH------HCHHHHHHHHHHCCCCCHHHHHHCCCCCEECCHHHHHHHHHHH
T ss_conf 9--999-----------998------4899999999829967899999869972500067789999999
No 33
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.95 E-value=9.8e-10 Score=79.85 Aligned_cols=159 Identities=18% Similarity=0.207 Sum_probs=101.9
Q ss_pred CCCCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHHHHH-----------HHHH
Q ss_conf 77872899997666238------69999999998618998799997588----888889999999-----------9999
Q gi|254780747|r 33 DNSPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSS----PGGSAYAGEAIF-----------RAIQ 91 (293)
Q Consensus 33 ~~~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~~~i~-----------~ai~ 91 (293)
...+.|++|.++-+-.+ -+++.+.++++.+|+++++|||.=.. .|++.....++. ..+.
T Consensus 13 ~~~DgIa~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 92 (725)
T 2wtb_A 13 VGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISID 92 (725)
T ss_dssp ECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEESSSCCBCSSCC------------CCSSSHHHHH
T ss_pred ECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 85993899997785747799999999999999996589976999988899803073747475234677667888888999
Q ss_pred ----HHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf ----841-478679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r 92 ----KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 92 ----~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
.++ ..||+|+.+++.|..||+-+|++||.+++.+++.+|.--+ ++|+-+.
T Consensus 93 ~~~~~i~~~~kPvIAav~G~a~GGG~elalacD~ria~~~a~fg~PEv------------~lGl~P~------------- 147 (725)
T 2wtb_A 93 IITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPEL------------QLGVIPG------------- 147 (725)
T ss_dssp CCCCCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGG------------GGTCCCC-------------
T ss_pred HHHHHHHHCCCCEEEEECCEEEHHHHHHHHHCCEEEEECCCEEECCHH------------HCCCCCC-------------
T ss_conf 999999819998999988735089999999689899719979988035------------3084787-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 667899998877777666667789999851499988-998873498237889987798062389899999999
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~ 238 (293)
..-- ..+ ... +... ..+-+..|+.+++++|++.||||++...++.+..+.
T Consensus 148 ---~gg~--~~L-----------~r~------iG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~ 198 (725)
T 2wtb_A 148 ---FGGT--QRL-----------PRL------VGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTAR 198 (725)
T ss_dssp ---SSHH--HHH-----------HHH------HCHHHHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHH
T ss_pred ---CCHH--HHH-----------HHH------HHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCHHHHHHHH
T ss_conf ---1145--788-----------887------45788999987267754566530554024325315899999
No 34
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA; 1.80A {Geobacillus kaustophilus HTA426} PDB: 2qq3_A
Probab=98.94 E-value=1.4e-09 Score=78.80 Aligned_cols=160 Identities=19% Similarity=0.293 Sum_probs=103.6
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHH-------HH---HHHHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----888889999-------99---9999984
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYAGE-------AI---FRAIQKV 93 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~~-------~i---~~ai~~~ 93 (293)
++.|++|.++-+=. + .+++.+.++.+.+|+++++|+|.=.. .|+...... .. ......+
T Consensus 12 dg~va~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~ 91 (258)
T 2pbp_A 12 EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRL 91 (258)
T ss_dssp ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 79999999838786799999999999999999860998589999079864012753887731321146777776788998
Q ss_pred -CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCH
Q ss_conf -1478679960332332232100011100013013534555653021024567774204225531552112346667899
Q gi|254780747|r 94 -KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 (293)
Q Consensus 94 -k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~ 172 (293)
...||+|+.+++.|..||..+|++||.+++.+.+.++.--+ ++|+.+. +.-
T Consensus 92 ~~~~~p~Iaai~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~~Gl~p~----------------~g~ 143 (258)
T 2pbp_A 92 SIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEV------------NLGVMPG----------------AGG 143 (258)
T ss_dssp HTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGG------------GGTCCCC----------------SSH
T ss_pred HCCCCCEEEEECCEEEEHHHHHHHHCCEEEECCCCEEECCCC------------CCCCCCC----------------CCH
T ss_conf 518998899980657616689986278799879978987311------------5687987----------------229
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 9988777776666677899998514999889-98873498237889987798062389899999999741
Q gi|254780747|r 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 173 e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
- ..+ ...| .... .+-+..|+.+++++|+++||||++...++..+.+.+.+
T Consensus 144 ~--~~l-----------~~~i------G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a 194 (258)
T 2pbp_A 144 T--QRL-----------TKLI------GPKRALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLA 194 (258)
T ss_dssp H--HHH-----------HHHH------CHHHHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHH
T ss_pred H--HHH-----------HHHH------CHHHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHH
T ss_conf 9--999-----------9986------8999999998299787999998899018725788888999999
No 35
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=98.94 E-value=2e-09 Score=77.90 Aligned_cols=161 Identities=20% Similarity=0.287 Sum_probs=103.6
Q ss_pred CCCEEEEEEEEEEEC-----C--HHHHHHHHHHHHCCCCCCEEEEECCC-----CCCCHHH------------HHHHHHH
Q ss_conf 787289999766623-----8--69999999998618998799997588-----8888899------------9999999
Q gi|254780747|r 34 NSPHVARIAIRGQIE-----D--SQELIERIERISRDDSATALIVSLSS-----PGGSAYA------------GEAIFRA 89 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~-----~--~~~l~~~l~~a~~d~~ik~ivL~i~S-----pGG~~~~------------~~~i~~a 89 (293)
.++.|+.|.++-+=. . .+++.+.|+.+.+|+++++|||+=+. .|+.... .....+.
T Consensus 18 ~~~gv~~itlnrP~~~Nal~~~~~~el~~~l~~~~~d~~~~~vVl~g~g~~~F~~G~d~~~~~~~~~~~~~~~~~~~~~~ 97 (272)
T 1hzd_A 18 ENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAV 97 (272)
T ss_dssp GGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHH
T ss_pred ECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf 34988999977998779999999999999999998599964999962788711355100011001203445667789999
Q ss_pred HHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 99841-47867996033233223210001110001301353455565302102456777420422553155211234666
Q gi|254780747|r 90 IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 (293)
Q Consensus 90 i~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~ 168 (293)
...+. ..|||++.+.+.|..||..+|++||.+++.+.+.++.--+ ++|+-+.
T Consensus 98 ~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~--------------- 150 (272)
T 1hzd_A 98 INDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVET------------KLAIIPG--------------- 150 (272)
T ss_dssp HHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCCC---------------
T ss_pred HHHHHHCCCCEEEEECCEECCCCCEEECCCCHHHHCCCCEEECCCC------------CEEECCC---------------
T ss_conf 9999978998999978803357751100303223068988977542------------6513675---------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCH----HHHHHHHHHHC
Q ss_conf 789999887777766666778999985149998899-88734982378899877980623898----99999999741
Q gi|254780747|r 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQ----EEVWQSLYALG 241 (293)
Q Consensus 169 ~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~----~~a~~~l~~~~ 241 (293)
+.- ...+ ...| ..... +-+..|+.++|++|+++||||++... +.+.+++...+
T Consensus 151 -~g~--~~~l-----------~~~i------g~~~a~~lll~g~~i~a~eA~~~Glv~~vv~~~~~~~~~~~~a~~~a 208 (272)
T 1hzd_A 151 -GGG--TQRL-----------PRAI------GMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLA 208 (272)
T ss_dssp -SSH--HHHH-----------HHHH------CHHHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHH
T ss_pred -CCC--CEEE-----------CHHH------HHHHHHHHHHCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf -244--1043-----------0344------39999878612884689999757972698486333799999999999
No 36
>3ome_A Enoyl-COA hydratase; ssgcid, structural genomics, structural genomics center for infectious disease, lyase; 2.05A {Mycobacterium smegmatis str}
Probab=98.92 E-value=4.5e-09 Score=75.71 Aligned_cols=158 Identities=18% Similarity=0.269 Sum_probs=100.9
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHH-----------------HHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----8888899-----------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYA-----------------GEAI 86 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~-----------------~~~i 86 (293)
+++|++|.++-|=. + .+++.+.|+.+.+|+.+++|||.=+. .|++... ....
T Consensus 30 ~~~Va~ItlnrP~~~Nals~~~~~eL~~al~~~~~d~~v~~vVltg~g~~F~~G~dl~~~~~~~~~~~~~~~~~~~~~~~ 109 (282)
T 3ome_A 30 ADSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLRGGGEVPEKISLEFIIQHEARRY 109 (282)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC-------CCCHHHHHHHHHHHT
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999758464689999999999999999986889179998268774013522431244443320245578899999
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+.++. ..||+|+.+.+.|..||.-++++||.+++.+.+.++.- .. ++|+..
T Consensus 110 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~-------e~-----~~g~~~------------- 164 (282)
T 3ome_A 110 LDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLILASDDALFSDP-------VA-----LMGIGG------------- 164 (282)
T ss_dssp THHHHHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECC-------GG-----GGTCSS-------------
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHHHCCCCEEECC-------CC-----EEECCC-------------
T ss_conf 99999998199989999658313268999760041553557676345-------23-----561064-------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 666789999887777766666778999985149998899887349823788998779806238989999999974
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
.-... +...+..+ ...+-+..|+.+++++|+++||||++...+++.+++.+.
T Consensus 165 -~~~~~-----------------l~~~~g~~-----~A~~llltG~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 216 (282)
T 3ome_A 165 -VEYHG-----------------HTWELGPR-----KAKEILFTGRALTAEEAERTGMVNRVVARDELDAQTREL 216 (282)
T ss_dssp -CSSCC-----------------HHHHHCHH-----HHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHH
T ss_pred -CHHHH-----------------HHHHHHHH-----HHHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHHHH
T ss_conf -30257-----------------88886178-----999999728856799986549966741768999999999
No 37
>2iex_A Dihydroxynapthoic acid synthetase; crotonase-like family, beta-BETA-alpha, coenzyme biosyntheses, naphthoate synthase; 2.20A {Geobacillus kaustophilus HTA426} PDB: 2uzf_A*
Probab=98.92 E-value=4.2e-09 Score=75.86 Aligned_cols=160 Identities=21% Similarity=0.279 Sum_probs=103.5
Q ss_pred CCEEEEEEEEEEEC-----C--HHHHHHHHHHHHCCCCCCEEEEECCCC----CCCHHH----------HH----HHHHH
Q ss_conf 87289999766623-----8--699999999986189987999975888----888899----------99----99999
Q gi|254780747|r 35 SPHVARIAIRGQIE-----D--SQELIERIERISRDDSATALIVSLSSP----GGSAYA----------GE----AIFRA 89 (293)
Q Consensus 35 ~~~i~~i~i~G~I~-----~--~~~l~~~l~~a~~d~~ik~ivL~i~Sp----GG~~~~----------~~----~i~~a 89 (293)
++.|++|.++-+=. . .+++.+.++++.+|+++++|+|.=+.. ||+... .. ...+.
T Consensus 19 ~~gV~~itlnrp~~~Nals~~m~~~l~~al~~~~~d~~v~~vvl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (272)
T 2iex_A 19 YNGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDL 98 (272)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBC---------------CCCTHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999999757353579899999999999999861999559998437865400377187760356420245677777789
Q ss_pred HHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 99841-47867996033233223210001110001301353455565302102456777420422553155211234666
Q gi|254780747|r 90 IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 (293)
Q Consensus 90 i~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~ 168 (293)
...++ ..||||+.+++.|..||.-++++||-+++.+.+.++.-.+ ++|+-+. -
T Consensus 99 ~~~~~~~~kPvIAav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~lGl~p~--------------~ 152 (272)
T 2iex_A 99 QRLIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGP------------KVGSFDG--------------G 152 (272)
T ss_dssp HHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHH------------HHTCCCC--------------S
T ss_pred HHHHHHCCCCEEEEECCEEEHHHHHHHHCCCCCEECCCCEEECCCC------------CCCCCCC--------------H
T ss_conf 9999839998999988984378999986036445668878987500------------1340766--------------0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 789999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 169 ~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
..+. .+. ..| ..... +-+..|+.+++++|+++||||++...+++.+++.+.+
T Consensus 153 ~~~~----~l~-----------r~v------g~~~a~~lll~g~~i~a~eA~~~Glv~~v~~~~~l~~~a~~~a 205 (272)
T 2iex_A 153 YGAG----YLA-----------RIV------GHKKAREIWYLCRQYTAQEALEMGLVNKVVPLEQLEEETVKWA 205 (272)
T ss_dssp TTTH----HHH-----------HHH------CHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHH
T ss_pred HHHH----HHH-----------HHH------HHHHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHH
T ss_conf 1578----999-----------997------2999999997088656999976799769807789999999999
No 38
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=98.92 E-value=9.3e-09 Score=73.69 Aligned_cols=161 Identities=15% Similarity=0.142 Sum_probs=101.5
Q ss_pred CCCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCH---------HHH----HHHHHH
Q ss_conf 787289999766623----8---69999999998618998799997588----88888---------999----999999
Q gi|254780747|r 34 NSPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSA---------YAG----EAIFRA 89 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~---------~~~----~~i~~a 89 (293)
.++.|+.|.++.+=. + .+++.+.++++.+|++++.|||.=+. .|++. ... ....+.
T Consensus 30 ~~~gV~~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~i~vvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2j5g_A 30 DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKV 109 (263)
T ss_dssp CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHH
T ss_pred ECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 48948999975898778889999999999999997599985999978899752887231334445531014667899999
Q ss_pred HHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 99841-47867996033233223210001110001301353455565302102456777420422553155211234666
Q gi|254780747|r 90 IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 (293)
Q Consensus 90 i~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~ 168 (293)
+..+. ..||+|+.+++.|..|+ .++++||.+++.+.+.+... + .-++|+-+.
T Consensus 110 ~~~l~~~~~PvIa~v~G~a~GGg-~lal~cD~~ia~~~a~f~~~------p-----e~~~G~~p~--------------- 162 (263)
T 2j5g_A 110 LQNLLDIEVPVISAVNGAALLHS-EYILTTDIILASENTVFQDM------P-----HLNAGIVPG--------------- 162 (263)
T ss_dssp HHHHHTCCSCEEEEECSEECSCG-GGGGGCSEEEEETTCEECCC------H-----HHHHTCCCC---------------
T ss_pred HHHHHHCCCCEEEEECCCEEEEE-EECCCCCEEEECCCCEEEEC------H-----HHCCCCCCC---------------
T ss_conf 99999669975876188547887-74255634786478668764------1-----111166767---------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 78999988777776666677899998514999889-98873498237889987798062389899999999741
Q gi|254780747|r 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 169 ~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
+.-. ..+ ...+- ... .+-+..|+.++|++|+++||||++...++..+++.+.+
T Consensus 163 -~g~~--~~l-----------~~~iG------~~~a~~llltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a 216 (263)
T 2j5g_A 163 -DGVH--ILW-----------PLALG------LYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIA 216 (263)
T ss_dssp -SSHH--HHH-----------HHHHH------HHHHHHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHH
T ss_pred -CCCH--HHH-----------HHHHH------HHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHH
T ss_conf -5607--788-----------98846------999976561398012999977799309878789999999999
No 39
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.90 E-value=8.7e-09 Score=73.88 Aligned_cols=158 Identities=22% Similarity=0.328 Sum_probs=102.6
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHHH---------------HHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----888889999---------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYAGE---------------AIFR 88 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~~---------------~i~~ 88 (293)
+++|++|.++-+=. + .+++.+.++.+.+|+++++|||+=+. .|+...... ...+
T Consensus 6 ~G~ia~itlnrP~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvi~g~g~~f~~g~dl~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
T 1uiy_A 6 KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMR 85 (253)
T ss_dssp CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 39999999858776789899999999999999973999659999788866445640676641234553012232123668
Q ss_pred HHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 999841-4786799603323322321000111000130135345556530210245677742042255315521123466
Q gi|254780747|r 89 AIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 (293)
Q Consensus 89 ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~ 167 (293)
....+. .+||+|+.+++.|..||..+|++||.+++.+.+.++.--+ ++|+-+
T Consensus 86 ~~~~l~~~~kpvIaai~G~a~GgG~~lal~cD~ria~~~a~~~~pe~------------~~g~~~--------------- 138 (253)
T 1uiy_A 86 LFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEV------------KIGFVA--------------- 138 (253)
T ss_dssp HHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHH------------HHTCCC---------------
T ss_pred HHHHHHHCCCCEEEEECCEEEHHHHHHHHHCCEEEECCCCCCCCCCC------------EEEECC---------------
T ss_conf 99999968998899993857628899997347889545551157400------------062267---------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 67899998877777666667789999851499988998-87349823788998779806238989999999974
Q gi|254780747|r 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 168 ~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
.-.-. .+.. .+...... -+..|+.+++++|++.||||++...++...++.++
T Consensus 139 ----~~g~~-----------~l~~------~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~ 191 (253)
T 1uiy_A 139 ----ALVSV-----------ILVR------AVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALEEAKAL 191 (253)
T ss_dssp ----HHHHH-----------HHHH------HSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHH
T ss_pred ----CHHHH-----------HHHH------HHCHHHHHHHHHCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHH
T ss_conf ----45999-----------9999------87899999987329857799998679963865768899999999
No 40
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.80A {Streptomyces avermitilis}
Probab=98.90 E-value=2.9e-09 Score=76.86 Aligned_cols=159 Identities=18% Similarity=0.199 Sum_probs=100.2
Q ss_pred CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCCC----CC-CH------HHHHH-----------H
Q ss_conf 872899997666238------699999999986189987999975888----88-88------99999-----------9
Q gi|254780747|r 35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSSP----GG-SA------YAGEA-----------I 86 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~Sp----GG-~~------~~~~~-----------i 86 (293)
++.|+.|.++-|-.+ .+++.+.++.+.+|+++++|||.=+.+ || .. ....+ +
T Consensus 16 ~~gVa~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVl~g~g~~ffs~G~dl~~~~~~~~~~~~~~~~~~~~~~~ 95 (287)
T 3gkb_A 16 EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVF 95 (287)
T ss_dssp ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTT
T ss_pred ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 89999999788985889999999999999999868994599996789885500327887652001033332107788999
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 99999841-47867996033233223210001110001-30135345556530210245677742042255315521123
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a-~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~ 164 (293)
....+.++ ..||+|+.+.+.|..||.-++++||.+++ ...+.++.-- -++|+-+.
T Consensus 96 ~~~~~~i~~~pkPvIaav~G~a~GgG~~lalacD~ria~~~~a~f~~pe------------~~~Gl~p~----------- 152 (287)
T 3gkb_A 96 QAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIE------------ALMGIIPG----------- 152 (287)
T ss_dssp HHHHHHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGG------------GGGTSCCC-----------
T ss_pred HHHHHHHHHCCCCEEEEECCCEEEECCHHCCCCCCCCCCHHHHCCCCCE------------EEECCCCC-----------
T ss_conf 9999999839998899957947860511210466343210100135741------------13465886-----------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 46667899998877777666667789999851499988-99887349823788998779806238989999999974
Q gi|254780747|r 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 165 ~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
+... ..+.. .+ ... ..+-+..|+.+++++|++.||||++...++..+.+.+.
T Consensus 153 -----~g~~--~~l~~-----------~i------G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 205 (287)
T 3gkb_A 153 -----GGGT--QYLRG-----------RV------GRNRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRV 205 (287)
T ss_dssp -----SSHH--HHHHH-----------HH------CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHH
T ss_pred -----HHHH--HHHHH-----------HC------CHHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHH
T ss_conf -----4689--99999-----------71------888899998658844689999859904983878999999999
No 41
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=98.88 E-value=9.1e-09 Score=73.77 Aligned_cols=158 Identities=20% Similarity=0.299 Sum_probs=105.4
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHH---------H----HHHHHH
Q ss_conf 87289999766623----8---6999999999861899879999758----888888999---------9----999999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAG---------E----AIFRAI 90 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~---------~----~i~~ai 90 (293)
++.|+.|.++-+=. + .+++.+.++.+.+|++++.|||.=. |.|++.... . .+.+.+
T Consensus 33 ~~GVa~ItlnrP~~~Nals~~~~~eL~~al~~~~~d~~vrvvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 112 (286)
T 3myb_A 33 ERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVM 112 (286)
T ss_dssp TTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99489999758887789899999999999999974899569999569997137878899834676778888887778999
Q ss_pred HHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 9841-478679960332332232100011100013013534555653021024567774204225531552112346667
Q gi|254780747|r 91 QKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 (293)
Q Consensus 91 ~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~ 169 (293)
.++. .+||+|+.+.+.|..||.-+|++||.+++.+.+.++.-.+ ++|+-+
T Consensus 113 ~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~------------~lGl~p----------------- 163 (286)
T 3myb_A 113 LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGI------------NVGLFC----------------- 163 (286)
T ss_dssp HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGG------------GGTCCC-----------------
T ss_pred HHHHHCCCCEEEEECCEEEHHHHHHHHHCCEEEECCCCEEECCCE------------EECCCC-----------------
T ss_conf 999849998899988987526688987166689769988988630------------155067-----------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 899998877777666667789999851499988998-87349823788998779806238989999999974
Q gi|254780747|r 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 170 ~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
..- ..+ . .|.+...... -+..|+.+++++|+++||||++...++....+.+.
T Consensus 164 ---~~g-----------~~~---l--~~~vG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~ 216 (286)
T 3myb_A 164 ---STP-----------GVA---L--SRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAM 216 (286)
T ss_dssp ---HHH-----------HHH---H--TTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHH
T ss_pred ---CCC-----------CCC---H--HHHHCHHHHHHHHHCCCEECHHHHHHCCCCEECCCHHHHHHHHHHH
T ss_conf ---876-----------541---4--7671899999995569755778998779974517867899999999
No 42
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; 2.05A {Streptomyces coelicolor A3}
Probab=98.88 E-value=1.4e-08 Score=72.51 Aligned_cols=159 Identities=20% Similarity=0.278 Sum_probs=100.9
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHH------------H----HHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----888889------------9----99999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAY------------A----GEAIF 87 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~------------~----~~~i~ 87 (293)
+++|+.|.++-+=. + .+++.+.|+++.+|+.+++|||.=.. .||+.. . ...+.
T Consensus 24 ~~~V~~ItlnrP~~~Nals~~~~~el~~al~~~~~d~~v~~vVitg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 103 (279)
T 3g64_A 24 TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTG 103 (279)
T ss_dssp ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 89999999748876789899999999999999960999579999479873681250575431121000245555555566
Q ss_pred HHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 9999841-478679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r 88 RAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 88 ~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
+.+..++ ..||+|+.+.+.|..||..++++||.+++.+.+.+|.-.+ ++|+-+
T Consensus 104 ~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~------------~~G~~p-------------- 157 (279)
T 3g64_A 104 QVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFT------------RVGLSG-------------- 157 (279)
T ss_dssp HHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGG------------GGTCCS--------------
T ss_pred HHHHHHHHCCCCEEEEECCEEEHHHHHHHHHCCEEECCCCCEEECCHH------------HCCCCC--------------
T ss_conf 666788719998999978965303289987346764164565536211------------028476--------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 6678999988777776666677899998514999889-988734982378899877980623898999999997
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
-. +.-. ..+. . .+.... .+-+..|+.+++++|++.||||++...+++.+...+
T Consensus 158 ~~-~g~~--~~l~-----------r------~iG~~~a~~l~l~g~~i~a~eA~~~Glv~~vv~~~~l~~~~~~ 211 (279)
T 3g64_A 158 GD-MGAA--YLLP-----------R------VVGLGHATRLLMLGDTVRAPEAERIGLISELTEEGRADEAART 211 (279)
T ss_dssp CC-TTHH--HHHH-----------H------HHCHHHHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHH
T ss_pred CC-CHHH--HHHH-----------H------HHCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 52-2399--9999-----------9------8485799999981899989999974995403587899999999
No 43
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, structural genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=98.88 E-value=2.7e-08 Score=70.83 Aligned_cols=159 Identities=17% Similarity=0.140 Sum_probs=100.8
Q ss_pred CCEEEEEEEEEEE----CC---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHH------------H----HHHH
Q ss_conf 8728999976662----38---6999999999861899879999758----88888899------------9----9999
Q gi|254780747|r 35 SPHVARIAIRGQI----ED---SQELIERIERISRDDSATALIVSLS----SPGGSAYA------------G----EAIF 87 (293)
Q Consensus 35 ~~~i~~i~i~G~I----~~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~------------~----~~i~ 87 (293)
++.|+.|.++-|= .+ .+++.+.++++.+|+.+ .|||.-+ |.|++... . ..+.
T Consensus 33 ~dgI~~ItlnrP~~~Nals~~~~~el~~~l~~~~~d~~v-~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 111 (280)
T 2f6q_A 33 EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLR 111 (280)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCE-EEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 899999997589877898999999999999987449998-9999689987768986788741322332014577899999
Q ss_pred HHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 9999841-478679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r 88 RAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 88 ~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
+.+..+. .+||+|+.+.+.|..||..+|++||.+++.+.+.++.--+ ++|+-+.
T Consensus 112 ~~~~~l~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gi~p~------------- 166 (280)
T 2f6q_A 112 EFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFS------------HLGQSPE------------- 166 (280)
T ss_dssp HHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTG------------GGTCCCC-------------
T ss_pred HHHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCEEECHHH------------CCCCCCC-------------
T ss_conf 999999968998899976868755541003445322056858976143------------2585845-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 6678999988777776666677899998514999889-98873498237889987798062389899999999741
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
+.-- ..+. |.+.... .+-+..|+.+++++|+++||||++...+++.+++.+.+
T Consensus 167 ---~g~~--~~l~-----------------~~vG~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a 220 (280)
T 2f6q_A 167 ---GCSS--YTFP-----------------KIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRL 220 (280)
T ss_dssp ---TTHH--HHHH-----------------HHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHH
T ss_pred ---CCHH--HHHH-----------------HHHCHHHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHH
T ss_conf ---1668--9977-----------------7618677799987279898999987799358808579999999999
No 44
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=98.86 E-value=3e-09 Score=76.82 Aligned_cols=159 Identities=18% Similarity=0.240 Sum_probs=103.0
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHH------H----HHHHHHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588----88888999------9----999999984
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAYAG------E----AIFRAIQKV 93 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~------~----~i~~ai~~~ 93 (293)
+++|++|.++-|=. + .+++.+.++++.+|+++++|||.=+. .|++.... + .+.+.+..+
T Consensus 14 d~~Va~ItlnrP~~~Nals~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 93 (260)
T 1mj3_A 14 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHI 93 (260)
T ss_dssp GGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGG
T ss_pred CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 79989999808886789999999999999999985899079999779995327876565323531456788999999885
Q ss_pred C-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCH
Q ss_conf 1-478679960332332232100011100013013534555653021024567774204225531552112346667899
Q gi|254780747|r 94 K-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 (293)
Q Consensus 94 k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~ 172 (293)
. ..||+|+.+++.|..||..++++||.+++.+.+.++.-.+ ++|+-+. . ..+.
T Consensus 94 ~~~~kPvIaai~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~------------~~Gl~p~---------~-----g~~~ 147 (260)
T 1mj3_A 94 TRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI------------LLGTIPG---------A-----GGTQ 147 (260)
T ss_dssp GGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGG------------GGTCCCC---------S-----STTT
T ss_pred HCCCCCEEEEECCEEEHHHHHHHHHCCEEEECCCCEEECCCC------------CCCCCCC---------C-----CHHH
T ss_conf 259982999988756199999999789999769988989501------------5065864---------1-----3999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 998877777666667789999851499988-99887349823788998779806238989999999974
Q gi|254780747|r 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 173 e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~-~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
.+. . .+... ..+-+..|+.+++++|+++||||++...++....+.+.
T Consensus 148 ----~l~-----------~------~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~~~~~ 195 (260)
T 1mj3_A 148 ----RLT-----------R------AVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQC 195 (260)
T ss_dssp ----HHH-----------H------HHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHH
T ss_pred ----HHH-----------H------HHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHH
T ss_conf ----999-----------9------84289999996538714778898789817872325557999999
No 45
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, alternative splicing, fatty acid metabolism, enoyl coenzyme A hydratase; 2.3A {Homo sapiens}
Probab=98.86 E-value=8.3e-09 Score=74.02 Aligned_cols=156 Identities=20% Similarity=0.263 Sum_probs=102.2
Q ss_pred CEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHH-------------HHHHHHHHHH
Q ss_conf 7289999766623----8---69999999998618998799997588----888889-------------9999999999
Q gi|254780747|r 36 PHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAY-------------AGEAIFRAIQ 91 (293)
Q Consensus 36 ~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~-------------~~~~i~~ai~ 91 (293)
+.|+.|.++-+=. + .+++.+.++.+.+|++++.|||.=.. -|++.. ....+...+.
T Consensus 41 DGVa~ItlnrP~~~Nals~~~~~~l~~~l~~~~~d~~v~vvvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 120 (287)
T 2vx2_A 41 DGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMM 120 (287)
T ss_dssp TTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 88899997488877999999999999999998508996699997889986477541222000012466777767999999
Q ss_pred HHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 841-4786799603323322321000111000130135345556530210245677742042255315521123466678
Q gi|254780747|r 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 (293)
Q Consensus 92 ~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~ 170 (293)
.+. .+||+|+.+.+.|..||.-+|++||.+++.+.+.+|.-.+ ++|+-+
T Consensus 121 ~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~------------~~Gl~p------------------ 170 (287)
T 2vx2_A 121 HIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGV------------NVGLFC------------------ 170 (287)
T ss_dssp HHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG------------GGTCCC------------------
T ss_pred HHHCCCCCEEEEECCEEEHHHHHHHHHCCCCEECCCCEEECHHH------------CCCCCC------------------
T ss_conf 99728987799968866166788876056453778868987111------------527078------------------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 999988777776666677899998514999889988-734982378899877980623898999999997
Q gi|254780747|r 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 171 s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~-~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
.. ...+ . .|.+....... +..|+.+++++|++.||||++...+++.....+
T Consensus 171 --~~-----------g~~~---l--~r~lg~~~a~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~ 222 (287)
T 2vx2_A 171 --ST-----------PGVA---L--ARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMR 222 (287)
T ss_dssp --HH-----------HHHH---H--HTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHH
T ss_pred --CC-----------HHHH---H--HHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHHHHHHH
T ss_conf --72-----------2788---9--999999999999983994788999878770261786775678999
No 46
>2fbm_A Y chromosome chromodomain protein 1, telomeric isoform B; acetyltransferase, structural genomics, structural genomics consortium, SGC; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=98.86 E-value=2.4e-08 Score=71.16 Aligned_cols=159 Identities=18% Similarity=0.162 Sum_probs=100.7
Q ss_pred CCEEEEEEEEE-EE----CC---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHH----------------HHH
Q ss_conf 87289999766-62----38---69999999998618998799997588----88888999----------------999
Q gi|254780747|r 35 SPHVARIAIRG-QI----ED---SQELIERIERISRDDSATALIVSLSS----PGGSAYAG----------------EAI 86 (293)
Q Consensus 35 ~~~i~~i~i~G-~I----~~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~----------------~~i 86 (293)
++.|+.|.++. |= .+ .+++.+.++.+.+|+ ++.|||.=.. .|++.... +.+
T Consensus 30 ~~gva~itln~rP~~~Nal~~~~~~eL~~al~~~~~d~-~~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 108 (291)
T 2fbm_A 30 EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADD-SKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTI 108 (291)
T ss_dssp CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSS-CSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 89999999798972357989999999999999987399-87999978899567488755453222232102379999999
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+..+. .+||+|+.+++.|..||.-++++||.+++.+.+.++.- .-++|+-+.
T Consensus 109 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~p------------e~~~Gi~p~------------ 164 (291)
T 2fbm_A 109 KNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP------------YTTFGQSPD------------ 164 (291)
T ss_dssp HHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECC------------HHHHTCCCC------------
T ss_pred HHHHHHHHHCCCCEEEEECCEECCCCCCEEECCCEECCCHHHHHHHH------------HCEECCCCC------------
T ss_conf 99999998679989999799103188730023565301443332311------------200065346------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHH----HHHHHHHH
Q ss_conf 66678999988777776666677899998514999889-98873498237889987798062389899----99999974
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYAL 240 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~----a~~~l~~~ 240 (293)
+.-. ..+ . |.+.... .+-+..|+.++|++|+++||||++...++ +.+++.++
T Consensus 165 ----~~~~--~~l-----------~------r~iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l 221 (291)
T 2fbm_A 165 ----GCSS--ITF-----------P------KMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKEL 221 (291)
T ss_dssp ----TTHH--HHH-----------H------HHHCHHHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHH
T ss_pred ----CCCC--CCH-----------H------HHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHH
T ss_conf ----5443--100-----------4------5504568879998087245999998499308708268999999999999
Q ss_pred C
Q ss_conf 1
Q gi|254780747|r 241 G 241 (293)
Q Consensus 241 ~ 241 (293)
+
T Consensus 222 a 222 (291)
T 2fbm_A 222 A 222 (291)
T ss_dssp T
T ss_pred H
T ss_conf 8
No 47
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.85 E-value=1.6e-08 Score=72.14 Aligned_cols=148 Identities=14% Similarity=0.030 Sum_probs=94.0
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHH--------------------
Q ss_conf 87289999766623----8---6999999999861899879999758----888888999--------------------
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAG-------------------- 83 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~-------------------- 83 (293)
++.|++|.++-|-. + .+++.+.++.+.+|+++++|||.=+ |.|++....
T Consensus 16 ~~~v~~ItlnrP~~~Nal~~~~~~~l~~al~~~~~d~~v~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 95 (280)
T 1pjh_A 16 EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVS 95 (280)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 89999999768887789899999999999999974999769999669987438872688872234542111013478999
Q ss_pred ---HHHHHHHHHH-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEC
Q ss_conf ---9999999984-14786799603323322321000111000130-135345556530210245677742042255315
Q gi|254780747|r 84 ---EAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE-TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 (293)
Q Consensus 84 ---~~i~~ai~~~-k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p-~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g 158 (293)
....+.+..+ ..+||||+.+++.|..||.-+|++||.+++.+ .+.++. | .-++|+-+.
T Consensus 96 ~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~d~~~~~~-------p-----e~~~Gl~p~----- 158 (280)
T 1pjh_A 96 NFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLY-------P-----FANLGLITE----- 158 (280)
T ss_dssp HTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEEC-------C-----HHHHTCCCC-----
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHCC-------C-----CCCCCCCCC-----
T ss_conf 99999999999999689998999778101466423322105776444234236-------2-----016783887-----
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 521123466678999988777776666677899998514999889-98873498237889987798062389
Q gi|254780747|r 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGG 229 (293)
Q Consensus 159 ~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~ 229 (293)
+..- .. +...| .... .+-+..|+.+++++|++.||||++..
T Consensus 159 -----------~g~~--~~-----------l~~~v------G~~~a~~llltg~~~~a~eA~~~Glv~~vv~ 200 (280)
T 1pjh_A 159 -----------GGTT--VS-----------LPLKF------GTNTTYECLMFNKPFKYDIMCENGFISKNFN 200 (280)
T ss_dssp -----------TTHH--HH-----------HHHHH------CHHHHHHHHHTTCCEEHHHHHHTTCCSEECC
T ss_pred -----------CCCC--CC-----------HHHHH------HHHHHHHHHHCCCCCCHHHHHHCCCEEEEEC
T ss_conf -----------3232--11-----------47773------5999999998399577999998799448748
No 48
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=98.85 E-value=5.6e-09 Score=75.09 Aligned_cols=160 Identities=13% Similarity=0.140 Sum_probs=102.6
Q ss_pred CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECC-----CCCCCHHHHH---------------HHHH
Q ss_conf 872899997666238------6999999999861899879999758-----8888889999---------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLS-----SPGGSAYAGE---------------AIFR 88 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~-----SpGG~~~~~~---------------~i~~ 88 (293)
++.|+.|.++-+=.+ .+++.+.++.+.+|++++.|||.=. |.|++..... .+..
T Consensus 15 ~~~Va~itlnrp~~Nal~~~m~~eL~~al~~~~~d~~v~vvVl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 94 (289)
T 3h0u_A 15 DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGM 94 (289)
T ss_dssp ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHH
T ss_pred ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 89999999578986889999999999999998539895699992789980114015454443201013433456789999
Q ss_pred HHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 999841-4786799603323322321000111000130-13534555653021024567774204225531552112346
Q gi|254780747|r 89 AIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAE-TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 89 ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p-~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
.+..+. .+||+|+.+.+.|..+|..++++||.+++.+ ++.++.-- -++|+-+.
T Consensus 95 l~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~iaa~e~a~f~~pe------------~~~Gl~p~------------- 149 (289)
T 3h0u_A 95 LFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPE------------VGIGAPPG------------- 149 (289)
T ss_dssp HHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTH------------HHHTSCCC-------------
T ss_pred HHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCEEEECCCCCEEECCC------------CCCCCCCC-------------
T ss_conf 99999968998998059952463037877177135635886153664------------46525888-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 6678999988777776666677899998514999889-98873498237889987798062389899999999741
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
+.-- ..+ ... +.... .+-+..|+.++|++|+++||||++...++..+++.+.+
T Consensus 150 ---~g~~--~~l-----------~r~------iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a 203 (289)
T 3h0u_A 150 ---AGAI--QHL-----------TRL------LGRGRALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIA 203 (289)
T ss_dssp ---SSHH--HHH-----------HHH------HCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHH
T ss_pred ---CCHH--HHH-----------HHH------HHHHHHHHHHHCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHH
T ss_conf ---6425--777-----------765------10999999998399476999998799718718879999999999
No 49
>3p85_A Enoyl-COA hydratase; ssgcid, mycobacerium avium, structural seattle structural genomics center for infectious disease,; HET: 1PE; 1.90A {Mycobacterium avium}
Probab=98.85 E-value=1.3e-09 Score=79.14 Aligned_cols=159 Identities=14% Similarity=0.212 Sum_probs=102.5
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHH---HHHHHHHHHHHHC-CCCCE
Q ss_conf 87289999766623----8---69999999998618998799997588----888889---9999999999841-47867
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS----PGGSAY---AGEAIFRAIQKVK-NRKPV 99 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~---~~~~i~~ai~~~k-~~kpv 99 (293)
++.|+.|.++-|=. + .+++.+.++.+.+|+++++|||.=+. -|++.. ....+.....++. ..|||
T Consensus 32 ~d~Va~ItlnrP~~~Nal~~~~~~el~~al~~~~~d~~vr~vvltg~g~~F~aG~dl~~~~~~~~~~~~~~~~~~~~kPv 111 (270)
T 3p85_A 32 EERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELGGSSALPDISPRWPALTKPV 111 (270)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC------CCCCCCCCCCSSCE
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCE
T ss_conf 89999999658887799899999999999999975989169999799867246751454122113456899998689999
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99603323322321000111000130135345556530210245677742042255315521123466678999988777
Q gi|254780747|r 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 (293)
Q Consensus 100 va~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~ 179 (293)
|+.+.+.|..||..++++||.+++.+.+.++.-. -++|+-+. +.-- ..+.
T Consensus 112 Iaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe------------~~lGl~p~----------------~g~~--~~l~ 161 (270)
T 3p85_A 112 IGAINGAAVTGGLELALYCDILIASENARFADTH------------ARVGLLPT----------------WGLS--VRLP 161 (270)
T ss_dssp EEEECSEEETHHHHHHHHSSEEEEETTCEEECCT------------TTTTCCCC----------------SSHH--HHHH
T ss_pred EEEECCEEEHHHHHHHHHCCEEEECCCCEEECHH------------HHHCCCCC----------------CCCC--EEEE
T ss_conf 9998897550779998626758966887798856------------75187766----------------5753--2320
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 776666677899998514999889-9887349823788998779806238989999999974
Q gi|254780747|r 180 DVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 180 ~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
.. +.... .+-+..|+.+++++|+++||||++...+++.+.+.+.
T Consensus 162 -----------~~------ig~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 206 (270)
T 3p85_A 162 -----------QK------VGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAV 206 (270)
T ss_dssp -----------HH------HCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHH
T ss_pred -----------EC------CCCCHHHCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHH
T ss_conf -----------01------2320211110037858789998779912971878999999999
No 50
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabolism, lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus HTA426}
Probab=98.84 E-value=2.5e-08 Score=71.00 Aligned_cols=160 Identities=20% Similarity=0.206 Sum_probs=101.7
Q ss_pred CCCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECCC-----CCCCHHHH--------H----HHHHHH
Q ss_conf 7872899997666238------69999999998618998799997588-----88888999--------9----999999
Q gi|254780747|r 34 NSPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLSS-----PGGSAYAG--------E----AIFRAI 90 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~S-----pGG~~~~~--------~----~i~~ai 90 (293)
.++.|+.|.++.+=.+ .+++.+.++++.+|+.++.|||.=.. .|++.... . ...+.+
T Consensus 15 ~~~~v~~itln~pk~Nal~~~m~~~l~~~l~~~~~d~~vr~vil~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 94 (265)
T 2ppy_A 15 KEDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETL 94 (265)
T ss_dssp EETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98999999989899899999999999999999984999659999617896056785210210100567889999888999
Q ss_pred HHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 9841-478679960332332232100011100013-01353455565302102456777420422553155211234666
Q gi|254780747|r 91 QKVK-NRKPVITEVHEMAASAGYLISCASNIIVAA-ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 (293)
Q Consensus 91 ~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~-p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~ 168 (293)
.++. ..||+|+.+.+.|..||..++++||.+++. ..+.++.-- -++|+-+.
T Consensus 95 ~~i~~~~kpvIaav~G~a~GgG~~lal~~D~ri~~~~~a~~~~pe------------~~~Gl~p~--------------- 147 (265)
T 2ppy_A 95 DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPE------------VSLGVLAG--------------- 147 (265)
T ss_dssp HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCG------------GGGTCCCT---------------
T ss_pred HHHHHCCCCEEEEECCEECCCCCEEECCCCEEEEECCCCCCCCCC------------CEECCCCC---------------
T ss_conf 998608987899981723368634410242689951542344720------------35677888---------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 78999988777776666677899998514999889-9887349823788998779806238989999999974
Q gi|254780747|r 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 169 ~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
+..- .. +... +.... .+-+..|+.|++++|+++||||++...++......+.
T Consensus 148 -~~~~--~~-----------l~r~------vG~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~~~~~~~~~ 200 (265)
T 2ppy_A 148 -TGGT--QR-----------LARL------IGYSRALDMNITGETITPQEALEIGLVNRVFPQAETRERTREY 200 (265)
T ss_dssp -TTHH--HH-----------HHHH------HCHHHHHHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHH
T ss_pred -CCHH--HH-----------HHHH------HCHHHHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHH
T ss_conf -5689--99-----------9998------5899999999759977899999869924634828999999999
No 51
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.83 E-value=1.4e-08 Score=72.52 Aligned_cols=159 Identities=18% Similarity=0.231 Sum_probs=102.0
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCC------CCCCHHH-----------HHHHHHHH
Q ss_conf 87289999766623----8---69999999998618998799997588------8888899-----------99999999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSS------PGGSAYA-----------GEAIFRAI 90 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~S------pGG~~~~-----------~~~i~~ai 90 (293)
.+.|++|.++-+=. + .+++.+.++++. ++.+++|||.-.+ .|+++.. .+.+++.+
T Consensus 11 ~~~i~~Itlnrp~~~Nal~~~~~~~L~~al~~~~-~~~~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 89 (261)
T 1ef8_A 11 INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN-RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQIT 89 (261)
T ss_dssp ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTC-STTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999973877779999999999999999973-799879999714899747668771134346743024669999999
Q ss_pred HHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 9841-478679960332332232100011100013013534555653021024567774204225531552112346667
Q gi|254780747|r 91 QKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 (293)
Q Consensus 91 ~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~ 169 (293)
..+. ..||+|+.+++.|..||..++++||.+++.+.+.++.--+ ++|+.+. .+
T Consensus 90 ~~i~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~------------~~G~~~~---------~g----- 143 (261)
T 1ef8_A 90 RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPV------------NLGVPYN---------LV----- 143 (261)
T ss_dssp HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHH------------HHTCCCC---------HH-----
T ss_pred HHHHHCCCCEEEEECCEEEEEEEHHHHHHHHCCCCCCCCCCCCCC------------CCCCCCC---------CC-----
T ss_conf 999977998899977488640102445344400000012358400------------0123556---------42-----
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 89999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 170 ~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
....-.|-+..... +-+..|+.++|++|+++||||++...++..+.+.+.+
T Consensus 144 ---------------------~~~~l~~~~G~~~a~~~~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~a 195 (261)
T 1ef8_A 144 ---------------------GIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMA 195 (261)
T ss_dssp ---------------------HHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHH
T ss_pred ---------------------CHHHHHHHHCCHHHHHHHHCCCEECHHHHHHCCCCCEECCCHHHHHHHHHHH
T ss_conf ---------------------0324467717367899998098445999997599227568045799999999
No 52
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 1.76A {Bordetella parapertussis}
Probab=98.83 E-value=2.5e-08 Score=70.96 Aligned_cols=154 Identities=17% Similarity=0.190 Sum_probs=101.6
Q ss_pred CCCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHH------------HHHHHHHHH
Q ss_conf 787289999766623----8---6999999999861899879999758----8888889------------999999999
Q gi|254780747|r 34 NSPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAY------------AGEAIFRAI 90 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~------------~~~~i~~ai 90 (293)
..+.|+.|.++-|=. + .+++.+.++.+.+ ++++.|||.=+ |.|++.. ....+.+.+
T Consensus 13 ~~~~v~tiTlnrP~~~Nal~~~m~~el~~al~~~~~-~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~l~ 91 (254)
T 3isa_A 13 RRPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLL 91 (254)
T ss_dssp ECSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 889999999557565789999999999999999757-9954999978899711698704310110012456678999999
Q ss_pred HHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 9841-478679960332332232100011100013013534555653021024567774204225531552112346667
Q gi|254780747|r 91 QKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 (293)
Q Consensus 91 ~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~ 169 (293)
.++. .+||+|+.+.+.|..||.-++++||.+++.+.+.++. |. -++|+-+
T Consensus 92 ~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~-------pe-----~~~Gl~p----------------- 142 (254)
T 3isa_A 92 QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRM-------PG-----LKFGLVL----------------- 142 (254)
T ss_dssp HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEEC-------CG-----GGGTCCC-----------------
T ss_pred HHHHHCCCCEEEECCCCEEECCCCCCCCCCEEEECCCCCCCC-------CC-----EEEEECC-----------------
T ss_conf 999858998999679718764762355577689765435557-------51-----0250057-----------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 8999988777776666677899998514999889-98873498237889987798062389899999999
Q gi|254780747|r 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 (293)
Q Consensus 170 ~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~ 238 (293)
.+ .. +...| .... .+-+..|+.+++++|+++||||++...++....+.
T Consensus 143 g~----~~-----------l~r~i------G~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~ 191 (254)
T 3isa_A 143 GT----RR-----------FRDIV------GADQALSILGSARAFDADEARRIGFVRDCAAQAQWPALID 191 (254)
T ss_dssp SH----HH-----------HHHHH------CHHHHHHHHTTTCEEEHHHHHHTTSSSEECCGGGHHHHHH
T ss_pred CC----CC-----------CHHHC------CHHHHHHHHHHCCCCCHHHHHHCCCHHEECCHHHHHHHHH
T ss_conf 76----54-----------34441------6999999986067767789997697315628879999999
No 53
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=98.81 E-value=2.7e-08 Score=70.84 Aligned_cols=151 Identities=17% Similarity=0.203 Sum_probs=98.7
Q ss_pred CCCEEEEEEEEEEEC-----C--HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCHHHH--------------HHHHH
Q ss_conf 787289999766623-----8--69999999998618998799997588----88888999--------------99999
Q gi|254780747|r 34 NSPHVARIAIRGQIE-----D--SQELIERIERISRDDSATALIVSLSS----PGGSAYAG--------------EAIFR 88 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~-----~--~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~~~~--------------~~i~~ 88 (293)
-++.|+.|.++-+=. . .+++.+.++.+. |+.++.|||.=.. .|+++... +.+++
T Consensus 13 ~~~~va~itlnrP~~~Nal~~~~~~el~~~l~~~~-~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 91 (267)
T 3hp0_A 13 FQASVCYITFHRPEANNTINDTLIEECLQVLNQCE-TSTVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYD 91 (267)
T ss_dssp EETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHH-HSSCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHH
T ss_pred EECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98999999975777457999999999999999974-69955999978998734799732252002210022232168999
Q ss_pred HHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 999841-4786799603323322321000111000130135345556530210245677742042255315521123466
Q gi|254780747|r 89 AIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 (293)
Q Consensus 89 ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~ 167 (293)
.+..+. ..||+|+.+.+.|..||..+|++||.+++.+.+.++.-. . ++|+-+.
T Consensus 92 ~~~~i~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe-------~-----~~Gl~p~-------------- 145 (267)
T 3hp0_A 92 LWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSE-------L-----LFGLYPA-------------- 145 (267)
T ss_dssp HHHHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCG-------G-----GGTCCCT--------------
T ss_pred HHHHHHHCCCCEEEEEECCEECCHHHHHHHHHHHHHHHCCCCCCCC-------C-----CCCCCCC--------------
T ss_conf 9999973898889996563231306877764766665401114741-------2-----5067887--------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHH
Q ss_conf 678999988777776666677899998514999889-988734982378899877980623898999
Q gi|254780747|r 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 (293)
Q Consensus 168 ~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a 233 (293)
+- ...+... +.... .+-+..|+.++|++|+++||||++...++.
T Consensus 146 --~g--------------~~~l~r~------iG~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~d~ 190 (267)
T 3hp0_A 146 --CV--------------LPFLIRR------IGRQKAHYMTLMTKPISVQEASEWGLIDAFDAESDV 190 (267)
T ss_dssp --TT--------------HHHHHHH------HCHHHHHHHHHHCCCBCHHHHHHHTSSSCBCSCTTH
T ss_pred --CH--------------HHHHHHH------HCHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCHHH
T ss_conf --02--------------4358777------296999999862897889999888994676695599
No 54
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure initiative; 2.00A {Rhodopseudomonas palustris}
Probab=98.80 E-value=6.9e-09 Score=74.52 Aligned_cols=155 Identities=18% Similarity=0.246 Sum_probs=93.2
Q ss_pred CEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHH--------H----HHHHHHHHHH
Q ss_conf 7289999766623----8---6999999999861899879999758----8888889--------9----9999999998
Q gi|254780747|r 36 PHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAY--------A----GEAIFRAIQK 92 (293)
Q Consensus 36 ~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~--------~----~~~i~~ai~~ 92 (293)
+.|+.|.++-|=. + .+++.+.|+++ |+++++|||.=. |.|++.. . .....+.+..
T Consensus 24 g~Va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~~rvvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 101 (275)
T 3hin_A 24 GPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDK 101 (275)
T ss_dssp TTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999996587767898999999999999841--6688489996789974588836775320012335566789999999
Q ss_pred HC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf 41-47867996033233223210001110001301353455565302102456777420422553155211234666789
Q gi|254780747|r 93 VK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 (293)
Q Consensus 93 ~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s 171 (293)
+. ..|||++.+.+.|..||..++++||.+++.+.+.++.--+ ++|+-+. ..
T Consensus 102 i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~------------~~Gl~p~----------------~~ 153 (275)
T 3hin_A 102 IQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEG------------SRGIFVG----------------GG 153 (275)
T ss_dssp HHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGG------------GGTCCCC----------------SS
T ss_pred HHHCCCCEEEEECCEEEHHHHHHHHHCCCCHHHHHCHHHHHHC------------EEEECCC----------------HH
T ss_conf 9718998899986877428899998226133755233242211------------0622565----------------48
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 99988777776666677899998514999889-988734982378899877980623898999999997
Q gi|254780747|r 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 172 ~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~-~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
. ...+ .. .+.... .+-+..|+.+++++|+++||||++...+++.+++.+
T Consensus 154 ~--~~~l-----------~~------~iG~~~a~~l~ltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~~ 203 (275)
T 3hin_A 154 G--SVRL-----------PR------LIGVARMADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALE 203 (275)
T ss_dssp H--HHHH-----------HH------HHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHH
T ss_pred H--HHHH-----------HH------HHCHHHHHHHHHHCCCCCHHHHHHCCCCCEECCHHHHHHHHHH
T ss_conf 8--8889-----------98------7054677667640896869999983996876682589999999
No 55
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=98.79 E-value=1.7e-08 Score=72.12 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=103.1
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC-------------CCCCCHHHH-----------
Q ss_conf 87289999766623----8---6999999999861899879999758-------------888888999-----------
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS-------------SPGGSAYAG----------- 83 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~-------------SpGG~~~~~----------- 83 (293)
.+.|+.|.++-+=. + .+++.+.++.+..|++|++|||+=. |.|++....
T Consensus 174 ~dgVa~ITLNRPek~NAls~~m~~eL~~al~~~~~D~~VrvVVLtGa~~~~~~~~gGr~FcAG~DL~el~~~~~~~~~~~ 253 (440)
T 2np9_A 174 RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFL 253 (440)
T ss_dssp ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCHHH
T ss_conf 99999999758887789999999999999999962999649999688866665788887754819998861677642156
Q ss_pred -----HHHHHHHHH------------H-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf -----999999998------------4-1478679960332332232100011100013013534555653021024567
Q gi|254780747|r 84 -----EAIFRAIQK------------V-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 (293)
Q Consensus 84 -----~~i~~ai~~------------~-k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll 145 (293)
..+.+.++. + +..||+|+.+++.|..||.-++++||.+++.+.+.++. +..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KPvIAaVnG~A~GGG~eLalacD~rIAae~A~F~l-------Pe~---- 322 (440)
T 2np9_A 254 MRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSL-------PAA---- 322 (440)
T ss_dssp HHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEEC-------CCT----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCEEECCCCCCCCCCCCCCCC-------CCC----
T ss_conf 665456788999887655467999999848998899966845617650123755020030130258-------654----
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCC
Q ss_conf 77420422553155211234666789999887777766666778999985149998899887349823788998779806
Q gi|254780747|r 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 (293)
Q Consensus 146 ~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD 225 (293)
++|+-+ .... ..+ ...|-.+| ..+-+..|+.+++++|+++||||
T Consensus 323 -~lGi~P-----------------g~gs--~~L-----------~r~vG~~~-----A~ellLtG~~isA~EA~~~GLV~ 366 (440)
T 2np9_A 323 -KEGIIP-----------------GAAN--LRL-----------GRFAGPRV-----SRQVILEGRRIWAKEPEARLLVD 366 (440)
T ss_dssp -TTCCCC-----------------TTHH--HHH-----------HHHHHHHH-----HHHHHHHCCCEETTSGGGGGTCS
T ss_pred -CEECCC-----------------CCHH--HHH-----------HHHHCHHH-----HHHHHHCCCCCCHHHHHHCCCCE
T ss_conf -451288-----------------7028--799-----------99859999-----99999749917799999769850
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 238989999999974
Q gi|254780747|r 226 VVGGQEEVWQSLYAL 240 (293)
Q Consensus 226 ~ig~~~~a~~~l~~~ 240 (293)
++...++....+.+.
T Consensus 367 eVVp~deL~~~a~~~ 381 (440)
T 2np9_A 367 EVVEPDELDAAIERS 381 (440)
T ss_dssp EEECHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHH
T ss_conf 776858999999999
No 56
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=98.77 E-value=3.8e-08 Score=69.84 Aligned_cols=158 Identities=23% Similarity=0.263 Sum_probs=99.6
Q ss_pred CCEEEEEEEEEEE-----CC--HHHHHHHHHHHHCCCCCCEEEEECCCC----CCCH-----H-HHHHHHHHHHHHC-CC
Q ss_conf 8728999976662-----38--699999999986189987999975888----8888-----9-9999999999841-47
Q gi|254780747|r 35 SPHVARIAIRGQI-----ED--SQELIERIERISRDDSATALIVSLSSP----GGSA-----Y-AGEAIFRAIQKVK-NR 96 (293)
Q Consensus 35 ~~~i~~i~i~G~I-----~~--~~~l~~~l~~a~~d~~ik~ivL~i~Sp----GG~~-----~-~~~~i~~ai~~~k-~~ 96 (293)
+++|+.|.++-+= .. .+++.+.++.+.+|+++++|||+=... |+.. . ...........+. ..
T Consensus 13 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~l~~~~ 92 (255)
T 3p5m_A 13 DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAADAANRVVRAITSLP 92 (255)
T ss_dssp ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHHHHHHHHHHHHHHHHHCS
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 89999999758886789899999999999999974999279999666765335774301222343125779999998199
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
Q ss_conf 86799603323322321000111000130135345556530210245677742042255315521123466678999988
Q gi|254780747|r 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 (293)
Q Consensus 97 kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~ 176 (293)
||+|+.+.+.|..||..++++||.+++++.+.++.--+ ++|+-+. .. ...
T Consensus 93 kPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~------------~~Gl~p~----------------~g--~~~ 142 (255)
T 3p5m_A 93 KPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFT------------RVGLMPD----------------GG--ASA 142 (255)
T ss_dssp SCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGG------------GGTCCCC----------------TT--HHH
T ss_pred CCEEEEECCEEEEHHHHHHHHCCEEEECCCCEEECCCC------------CCCCCCC----------------CC--CCC
T ss_conf 98999978988737789987378899789988967720------------4064655----------------57--632
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 7777766666778999985149998899-88734982378899877980623898999999997
Q gi|254780747|r 177 MMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 177 ~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
.+.. .+..... .-+..|+.++|++|++.||||++...++..+++.+
T Consensus 143 ~l~~-----------------~~g~~~a~~~~l~g~~~~a~ea~~~Glv~~vv~~~~l~~~a~~ 189 (255)
T 3p5m_A 143 LLPL-----------------LIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVLTD 189 (255)
T ss_dssp HTHH-----------------HHCHHHHHHHHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHH
T ss_pred CCCC-----------------CCCCCCHHHHHCCCCCCCHHHHHHCCCCCEEECHHHHHHHHHH
T ss_conf 4554-----------------4543100211113787889999876993488182799999999
No 57
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.30A {Shewanella oneidensis mr-1}
Probab=98.77 E-value=5e-08 Score=69.11 Aligned_cols=155 Identities=16% Similarity=0.143 Sum_probs=98.1
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCHHHHH------------------
Q ss_conf 87289999766623----8---699999999986189987999975888-----88889999------------------
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLSSP-----GGSAYAGE------------------ 84 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~Sp-----GG~~~~~~------------------ 84 (293)
.+.|++|.++-|=. + .+++.+.++.+.+|++|++|||.=..+ ||++....
T Consensus 49 ~~~Vg~ItLNRP~~lNAl~~~m~~~l~~~l~~~~~d~~v~~vVl~g~G~kaFcAG~Dl~~l~~~~~~~~~~~~~~~~~~~ 128 (407)
T 3ju1_A 49 GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFF 128 (407)
T ss_dssp SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 98489999817886789899999999999999974989579999807999710781889885133333343015899999
Q ss_pred -HHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCC
Q ss_conf -9999999841-47867996033233223210001110001301353455565302102456777420422553155211
Q gi|254780747|r 85 -AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 (293)
Q Consensus 85 -~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~ 162 (293)
..+.....+. ..||+++.+++.|..||.-++++||.+++.+.+.++. |. -++|+-+.
T Consensus 129 ~~~~~~~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~riate~a~f~~-------pe-----~~iGl~P~--------- 187 (407)
T 3ju1_A 129 EEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAM-------PE-----VTIGLYPD--------- 187 (407)
T ss_dssp HHHHHHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEEC-------GG-----GGGTCCSC---------
T ss_pred HHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCEEEC-------HH-----HCEEECCC---------
T ss_conf 9888999999855993899976702045520002456465589879832-------34-----14542798---------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 23466678999988777776666677899998514999889988734982378899877980623898999999
Q gi|254780747|r 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 (293)
Q Consensus 163 ~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~ 236 (293)
.+. ..|.. ..+... ...-...|+.++|++|++.||||++...++....
T Consensus 188 ~G~---------------------s~~~~----~~~~~~-~~~l~ltG~~i~a~eA~~~Glv~~vv~~~~l~~~ 235 (407)
T 3ju1_A 188 VGG---------------------SYFLN----RMPGKM-GLFLGLTAYHMNAADACYVGLADHYLNRDDKELM 235 (407)
T ss_dssp TTH---------------------HHHTT----TSSTTH-HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHH
T ss_pred CHH---------------------HHHHH----HCCHHH-HHHHHHHCCCCCHHHHHHCCCCEEECCHHHHHHH
T ss_conf 115---------------------46746----235288-8898865897765789874974175386689999
No 58
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, quercetin, structural genomics consortium, SGC, alternative splicing; HET: QUE; 1.50A {Homo sapiens}
Probab=98.74 E-value=1e-07 Score=67.15 Aligned_cols=154 Identities=14% Similarity=0.189 Sum_probs=100.7
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC-----CCCCCHHHH---------------HHHH
Q ss_conf 87289999766623----8---6999999999861899879999758-----888888999---------------9999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS-----SPGGSAYAG---------------EAIF 87 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~-----SpGG~~~~~---------------~~i~ 87 (293)
.++|++|.++-+=. + .+++.+.++.+.+|++++.|||.=. |.|+++... ...+
T Consensus 13 ~g~v~~itlnrP~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vvltga~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 92 (363)
T 3bpt_A 13 KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEY 92 (363)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 89999999768886689999999999999999984999769999668998211781678774122332100367776776
Q ss_pred HHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 9999841-478679960332332232100011100013013534555653021024567774204225531552112346
Q gi|254780747|r 88 RAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 (293)
Q Consensus 88 ~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p 166 (293)
.....+. .+||+|+.+++.|..||.-++++||.+++.+.+.++.-- -++|+-+.
T Consensus 93 ~~~~~i~~~~kPvIaav~G~a~GgG~~la~~~D~~ia~~~a~f~~pe------------~~~Gl~P~------------- 147 (363)
T 3bpt_A 93 MLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPE------------TAIGLFPD------------- 147 (363)
T ss_dssp HHHHHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCG------------GGTTSCCC-------------
T ss_pred HHHHHHHHCCCCEEEECCCCEEECCHHHHCCCEEEECCCCCEEECCH------------HCCCCCCC-------------
T ss_conf 89999996899899806994735125552033131038974892413------------22146888-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 667899998877777666667789999851499988998873498237889987798062389899999
Q gi|254780747|r 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 (293)
Q Consensus 167 ~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~ 235 (293)
+.- ..++..+ -+ .....-+..|+.++|++|++.||||++...++...
T Consensus 148 ---~g~--------------~~~l~rl---~g--~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~e~l~~ 194 (363)
T 3bpt_A 148 ---VGG--------------GYFLPRL---QG--KLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAM 194 (363)
T ss_dssp ---TTH--------------HHHHHHS---ST--THHHHHHHHCCCEETHHHHHTTSCSEECCGGGHHH
T ss_pred ---CCC--------------EEEECCH---HH--HHHHHHHHHCCCCHHHHHHHCCCCEEECCHHHHHH
T ss_conf ---760--------------2342103---36--99999998489743999998599708638538999
No 59
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=98.72 E-value=6.4e-09 Score=74.70 Aligned_cols=159 Identities=15% Similarity=0.140 Sum_probs=100.3
Q ss_pred CCEEEEEEEEEEE----CC---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHHHHH---------HH---HH-
Q ss_conf 8728999976662----38---6999999999861899879999758----888888999999---------99---99-
Q gi|254780747|r 35 SPHVARIAIRGQI----ED---SQELIERIERISRDDSATALIVSLS----SPGGSAYAGEAI---------FR---AI- 90 (293)
Q Consensus 35 ~~~i~~i~i~G~I----~~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~~~i---------~~---ai- 90 (293)
.++|++|.++-|= .+ .+++.+.|+++..|+++++|||.=+ |.|++....... .. .+
T Consensus 19 ~g~v~~ItlnrP~~~Nals~~~~~~l~~~l~~~~~d~~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 98 (258)
T 3lao_A 19 RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWG 98 (258)
T ss_dssp ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTS
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999999768987789899999999999999973999659999779986615874665253330356776653334899
Q ss_pred HHH-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 984-1478679960332332232100011100013013534555653021024567774204225531552112346667
Q gi|254780747|r 91 QKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 (293)
Q Consensus 91 ~~~-k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~ 169 (293)
..+ +.+||+|+.+.+.|..+|.-++++||.+++.+.+.++.-.+ ++|+-+. . .
T Consensus 99 ~~~~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~---------~-----~ 152 (258)
T 3lao_A 99 VVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEV------------LRGIPPL---------G-----G 152 (258)
T ss_dssp CSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGG------------GTCCCSS---------C-----C
T ss_pred HHHHHCCCCEEEEEECEEECCCCHHHHCCCHHHHHHCCEEECHHH------------CCCCCCC---------C-----C
T ss_conf 998738998899981826037644310335221301367716433------------0078842---------0-----0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 899998877777666667789999851499988998-87349823788998779806238989999999974
Q gi|254780747|r 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 170 ~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
.+. .+ .. .+...... -+..|+.|++++|++.||||++...++..+++.+.
T Consensus 153 ~~~----~l-----------~r------~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 203 (258)
T 3lao_A 153 STV----RF-----------PR------AAGWTDAMRYILTGDEFDADEALRMRLLTEVVEPGEELARALEY 203 (258)
T ss_dssp CCS----HH-----------HH------HHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHH
T ss_pred HHH----HH-----------HH------HHCHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHH
T ss_conf 688----88-----------88------84678999884128805699997779920884820899999999
No 60
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.71 E-value=1.7e-07 Score=65.72 Aligned_cols=160 Identities=16% Similarity=0.135 Sum_probs=99.5
Q ss_pred CCEEEEEEEEEEE----CC---HHHHHHHHHHHHCCCCCCEEEEECCC----CCCCH--------HHHH----HHHHHHH
Q ss_conf 8728999976662----38---69999999998618998799997588----88888--------9999----9999999
Q gi|254780747|r 35 SPHVARIAIRGQI----ED---SQELIERIERISRDDSATALIVSLSS----PGGSA--------YAGE----AIFRAIQ 91 (293)
Q Consensus 35 ~~~i~~i~i~G~I----~~---~~~l~~~l~~a~~d~~ik~ivL~i~S----pGG~~--------~~~~----~i~~ai~ 91 (293)
++.|+.|.++-+- .+ .+++.+.++++..|+++++|+|.=+. .|+++ .... ...+.++
T Consensus 23 ~~~v~~i~ln~p~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 102 (257)
T 1szo_A 23 DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLN 102 (257)
T ss_dssp ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999789875679999999999999999974999549999668876215764433234441147788999999999
Q ss_pred HHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 841-4786799603323322321000111000130135345556530210245677742042255315521123466678
Q gi|254780747|r 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 (293)
Q Consensus 92 ~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~ 170 (293)
.+. .+||+++.+++.| -||..++++||.+++.+.+.+.. .|. -++|+-+ . +
T Consensus 103 ~l~~~~kpvIa~v~g~~-~GG~~lal~~D~ria~~~a~f~~------~pe-----~~~g~~p--------------~--~ 154 (257)
T 1szo_A 103 NLLSIEVPVIAAVNGPV-TNAPEIPVMSDIVLAAESATFQD------GPH-----FPSGIVP--------------G--D 154 (257)
T ss_dssp HHHHCCSCEEEEECSCB-CSSTHHHHTSSEEEEETTCEEEC------TTS-----GGGTCCC--------------T--T
T ss_pred HHHCCCCCEEEEEECCC-CEEEEEECCCCEEEECCCCEEEC------CCC-----CCCCCCC--------------C--C
T ss_conf 98708971899971355-50577505776489858886753------773-----2446477--------------6--5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 9999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 171 s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
... ..+ ... +..... +-+..|+.|++++|+++||||++...+++...+.+.+
T Consensus 155 g~~--~~l-----------~r~------ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a 207 (257)
T 1szo_A 155 GAH--VVW-----------PHV------LGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELA 207 (257)
T ss_dssp THH--HHH-----------HHH------HCHHHHHHHHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHH
T ss_pred CCC--CHH-----------HHH------CCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHH
T ss_conf 421--110-----------776------08999998986398163999985699887767689999999999
No 61
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=98.70 E-value=6.1e-08 Score=68.56 Aligned_cols=158 Identities=20% Similarity=0.162 Sum_probs=96.8
Q ss_pred CCEEEEEEEEE-E-----ECC--HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHH----------------HHH
Q ss_conf 87289999766-6-----238--6999999999861899879999758----888888999----------------999
Q gi|254780747|r 35 SPHVARIAIRG-Q-----IED--SQELIERIERISRDDSATALIVSLS----SPGGSAYAG----------------EAI 86 (293)
Q Consensus 35 ~~~i~~i~i~G-~-----I~~--~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~----------------~~i 86 (293)
.+.|+.|.++- + +.. .+++.+.++.+.+|+ +++|||.=+ |.|++.... +.+
T Consensus 12 ~dgv~~i~l~~rp~~~Nal~~~~~~el~~al~~~~~d~-~~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 90 (261)
T 2gtr_A 12 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAI 90 (261)
T ss_dssp ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 89989999888941035889999999999999986299-76999978998646688873542211233202478999999
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+..+. .+||+|+.+++.|..||.-++++||.+++.+.+.++.--+ ++|+-+.
T Consensus 91 ~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~------------ 146 (261)
T 2gtr_A 91 RNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYT------------TFGQSPD------------ 146 (261)
T ss_dssp HHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTT------------TTTCCCC------------
T ss_pred HHHHHHHHCCCCCEEEEECCEEEECCCHHHHCHHHHHHHHHHHHHHHHC------------CCCCCCC------------
T ss_conf 8876787509998999987814662117530001412335456553210------------1477788------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 6667899998877777666667789999851499988998-87349823788998779806238989999999974
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
..-. ..+ ... +...... -+..|+.++|++|++.||||++...++..+.+.+.
T Consensus 147 ----~g~~--~~l-----------~r~------~G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 199 (261)
T 2gtr_A 147 ----GCST--VMF-----------PKI------MGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVR 199 (261)
T ss_dssp ----TTHH--HHH-----------HHH------HCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHH
T ss_pred ----CCHH--HHH-----------HHH------CCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHH
T ss_conf ----4347--789-----------998------1952224542356767788997679736870818899999999
No 62
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.65 E-value=5.1e-07 Score=62.77 Aligned_cols=161 Identities=20% Similarity=0.204 Sum_probs=99.7
Q ss_pred CCEEEEEEEEEEE--------------CC---HHHHHHHHHHHH-CCCCCCEEEEECC-----CCCCCHHH---------
Q ss_conf 8728999976662--------------38---699999999986-1899879999758-----88888899---------
Q gi|254780747|r 35 SPHVARIAIRGQI--------------ED---SQELIERIERIS-RDDSATALIVSLS-----SPGGSAYA--------- 82 (293)
Q Consensus 35 ~~~i~~i~i~G~I--------------~~---~~~l~~~l~~a~-~d~~ik~ivL~i~-----SpGG~~~~--------- 82 (293)
+++|+.|.++-+= .+ ..++.+.++++. +|++|++|||.=. |.|++...
T Consensus 28 ~g~VA~ItLnrPe~~g~~~~~~~KLNAls~~m~~EL~dAl~~l~~d~pdVrvVVLtGag~raFcAGaDL~e~~~~~~~~~ 107 (556)
T 2w3p_A 28 NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWK 107 (556)
T ss_dssp ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCHHHH
T ss_pred ECCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCHHHHHCCCCCHH
T ss_conf 89999999817875555556787858899999999999999998279984899998089991656848886742574015
Q ss_pred ------HHHHHHHHHHH-C-CCCCEEEEECCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf ------99999999984-1-478679960332332232100011100013--0135345556530210245677742042
Q gi|254780747|r 83 ------GEAIFRAIQKV-K-NRKPVITEVHEMAASAGYLISCASNIIVAA--ETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 (293)
Q Consensus 83 ------~~~i~~ai~~~-k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~--p~s~vGsiGv~~~~~~~~~ll~k~gi~~ 152 (293)
..+..+.+... + .+||+|+.+++.|..||+-+|.+||.+++. +++.++.-- ++ .+|+-+
T Consensus 108 ~~~~~~~~e~~~~~~~~~~~~~kPvIAAVnG~A~GGG~eLALaCD~rIavad~~a~~~lPE-------v~----~lGl~P 176 (556)
T 2w3p_A 108 VNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPE-------VP----LLGVLP 176 (556)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCH-------HH----HHSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHCCCCCEECCCCCCCCCCCCC-------CC----CCCCCC
T ss_conf 6689999999999999998389989999758586612064406572030434442002642-------11----367789
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHCCCCCCHHHHHHCCCCCCCCCHH
Q ss_conf 255315521123466678999988777776666677899998514999889988-7349823788998779806238989
Q gi|254780747|r 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQE 231 (293)
Q Consensus 153 ~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~-~~~g~~~~~~~A~~~GLvD~ig~~~ 231 (293)
- ......+...|++....... +..|+.++|++|++.||||++...+
T Consensus 177 -----------------G----------------~ggt~R~~l~r~VG~a~A~ellltGe~i~AeeA~~~GLVd~VVp~e 223 (556)
T 2w3p_A 177 -----------------G----------------TGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPN 223 (556)
T ss_dssp -----------------T----------------TTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHH
T ss_pred -----------------C----------------CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEECCHH
T ss_conf -----------------7----------------4342566666451299999999829974799999769711772846
Q ss_pred HHHHHHHH
Q ss_conf 99999997
Q gi|254780747|r 232 EVWQSLYA 239 (293)
Q Consensus 232 ~a~~~l~~ 239 (293)
+..+.+.+
T Consensus 224 eL~e~A~e 231 (556)
T 2w3p_A 224 QFDQAIQA 231 (556)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 63
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium 104}
Probab=98.63 E-value=2.4e-07 Score=64.79 Aligned_cols=148 Identities=16% Similarity=0.290 Sum_probs=95.5
Q ss_pred CCEEEEEEEEEEEC----C---HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHHH-----------------HHH
Q ss_conf 87289999766623----8---6999999999861899879999758----888888999-----------------999
Q gi|254780747|r 35 SPHVARIAIRGQIE----D---SQELIERIERISRDDSATALIVSLS----SPGGSAYAG-----------------EAI 86 (293)
Q Consensus 35 ~~~i~~i~i~G~I~----~---~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~~-----------------~~i 86 (293)
...|+.|.++-|=. + .+++.+.++++.+|++++.|||.=+ |.|++.... ...
T Consensus 18 ~G~Va~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 97 (267)
T 3oc7_A 18 GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREM 97 (267)
T ss_dssp SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98789999738886799899999999999999965999559999788997748987798753244302467789999999
Q ss_pred HHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 99999841-47867996033233223210001110001301353455565302102456777420422553155211234
Q gi|254780747|r 87 FRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 (293)
Q Consensus 87 ~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~ 165 (293)
.+.+..+. ..||+|+.+++.|..||..++++||.+++.+.+.++.-- -++|+-+.
T Consensus 98 ~~~~~~l~~~~kPvIa~v~G~a~GgG~~la~~~D~ria~~~a~f~~~~------------~~~Gl~p~------------ 153 (267)
T 3oc7_A 98 AALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTE------------ARIGVAPA------------ 153 (267)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCG------------GGGTCCCT------------
T ss_pred HHHHHHHHHCCCCEEEEEECEECCCCHHHHHHCCCCEECCCCCEEHHH------------HCCCCCCC------------
T ss_conf 999999997799889998276611533776512301117754311253------------02077873------------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 6667899998877777666667789999851499988998873498237889987798062389
Q gi|254780747|r 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 (293)
Q Consensus 166 p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~ 229 (293)
+. ....+. |-......+-+..|+.|++++|++.||||++..
T Consensus 154 ----~g--~~~~~~-----------------~~~~~~~~~llltg~~~~a~eA~~~Glv~~v~e 194 (267)
T 3oc7_A 154 ----II--SLTLLP-----------------KLSARAAARYYLTGEKFDARRAEEIGLITMAAE 194 (267)
T ss_dssp ----TT--HHHHTT-----------------TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEECS
T ss_pred ----CH--HHHHHH-----------------HHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECH
T ss_conf ----01--889999-----------------988999999998589778799998898588760
No 64
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.63 E-value=1.2e-07 Score=66.71 Aligned_cols=158 Identities=13% Similarity=0.197 Sum_probs=95.3
Q ss_pred CCEEEEEEEEEEECC------HHHHHHHHHHHHCCCCCCEEEEECC----CCCCCHHH-------H----HHHHHHHHHH
Q ss_conf 872899997666238------6999999999861899879999758----88888899-------9----9999999984
Q gi|254780747|r 35 SPHVARIAIRGQIED------SQELIERIERISRDDSATALIVSLS----SPGGSAYA-------G----EAIFRAIQKV 93 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~------~~~l~~~l~~a~~d~~ik~ivL~i~----SpGG~~~~-------~----~~i~~ai~~~ 93 (293)
++.|++|.++.+=.+ .+++.+.++++.+|+.| |++.-+ |.|++... . ..+.+.++.+
T Consensus 13 ~~~i~~itln~pk~Nal~~~~~~~l~~~l~~~~~d~~V--vi~s~~~~~Fs~G~dl~~~~~~~~~~~~~~~~~~~l~~~l 90 (232)
T 3ot6_A 13 DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKDRAI--VIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRM 90 (232)
T ss_dssp ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHTTCE--EEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEE--EEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89999999889988989999999999999985549829--9997799967643224311111124667767899999999
Q ss_pred C-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf 1-47867996033233223210001110001301-353455565302102456777420422553155211234666789
Q gi|254780747|r 94 K-NRKPVITEVHEMAASAGYLISCASNIIVAAET-SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 (293)
Q Consensus 94 k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~-s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s 171 (293)
. ..||+++.+.+.|..||..++++||.+++.+. +.++.-.+ ++|+-+ .
T Consensus 91 ~~~~~p~Ia~v~G~~~GgG~~lal~~D~ria~~~~~~~~~pe~------------~~Gi~p------------------~ 140 (232)
T 3ot6_A 91 LSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEV------------QIGMTM------------------H 140 (232)
T ss_dssp HTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTT------------TTTCCC------------------C
T ss_pred HHCCCCEEEEEECCEECCCCHHHHHCCCHHHHHCCCCCCCCCE------------EECCCC------------------C
T ss_conf 7089977999806350662144551461345305543323001------------566656------------------7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 999887777766666778999985149998899-8873498237889987798062389899999999741
Q gi|254780747|r 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 172 ~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~-~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
...-..+. |.+..... +-+..|+.+++++|+++||||++...++..+.+.+.+
T Consensus 141 ~~~~~~l~-----------------~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a 194 (232)
T 3ot6_A 141 HAGIELAR-----------------DRLRKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVA 194 (232)
T ss_dssp HHHHHHHH-----------------HHSCHHHHHHHHTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHH
T ss_pred CCHHHHHH-----------------HHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHH
T ss_conf 63445777-----------------7727257778987089898999997799758708789999999999
No 65
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=98.32 E-value=2.2e-06 Score=58.71 Aligned_cols=161 Identities=14% Similarity=0.199 Sum_probs=93.4
Q ss_pred CCCCEEEEEEEEEEECC-------H----HHHHHHHHHH-----HCCCCCCEEEEECC----CCCCCHHHHH--------
Q ss_conf 77872899997666238-------6----9999999998-----61899879999758----8888889999--------
Q gi|254780747|r 33 DNSPHVARIAIRGQIED-------S----QELIERIERI-----SRDDSATALIVSLS----SPGGSAYAGE-------- 84 (293)
Q Consensus 33 ~~~~~i~~i~i~G~I~~-------~----~~l~~~l~~a-----~~d~~ik~ivL~i~----SpGG~~~~~~-------- 84 (293)
.+.+.|+.|.++-+-.. . +++...++.. .+++.+..|||.=+ +.|++.....
T Consensus 37 ~~~~~v~~i~~~rp~~~n~~r~~~~~~m~~el~~~~~~~~~~~~~~~~~~~~vVl~g~g~~FcaG~DL~~~~~~~~~~~~ 116 (305)
T 3m6n_A 37 EPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDR 116 (305)
T ss_dssp ETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTCH
T ss_pred ECCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCHHHHHHHCCCCCH
T ss_conf 46898899993362104888701269999999999998999985057663089995799937678899999753026537
Q ss_pred --------HHHHHHHHH----CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf --------999999984----14786799603323322321000111000130135345556530210245677742042
Q gi|254780747|r 85 --------AIFRAIQKV----KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 (293)
Q Consensus 85 --------~i~~ai~~~----k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~ 152 (293)
.+.+.+..+ ..+||+|+.+.+.|..||..+|++||.+++.+.+.+|.--+ ++|+-+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~kP~IAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~------------~~Gl~p 184 (305)
T 3m6n_A 117 ARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEV------------LFDLFP 184 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGG------------GGTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHCCCCCCCCCHHH------------CCCCCC
T ss_conf 89999999999999999997569998999988705089999999854770534431357043------------058898
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHCCCCCCHHHHHHCCCCCCCCCHH
Q ss_conf 25531552112346667899998877777666667789999851499988998-87349823788998779806238989
Q gi|254780747|r 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQE 231 (293)
Q Consensus 153 ~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~-~~~~g~~~~~~~A~~~GLvD~ig~~~ 231 (293)
. +.-- .. . .|.+...... -+..|+.++|++|++.||||++...+
T Consensus 185 ~----------------~g~~--~~---------------l--~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 229 (305)
T 3m6n_A 185 G----------------MGAY--SF---------------M--CQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRG 229 (305)
T ss_dssp C----------------SSHH--HH---------------H--TTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred C----------------CCHH--HH---------------H--HHHCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEECHH
T ss_conf 8----------------5358--99---------------9--9860699999999658999899998779930871856
Q ss_pred ---HHHHHHHHH
Q ss_conf ---999999974
Q gi|254780747|r 232 ---EVWQSLYAL 240 (293)
Q Consensus 232 ---~a~~~l~~~ 240 (293)
+...++.+.
T Consensus 230 ~l~~~~~~~a~~ 241 (305)
T 3m6n_A 230 QGVAAVEQVIRE 241 (305)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 66
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.79 E-value=7.1e-05 Score=49.27 Aligned_cols=121 Identities=17% Similarity=0.251 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHH-------HHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889-------9999999999841-4786799603323322321000111000
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAY-------AGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIV 122 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~-------~~~~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~ 122 (293)
+.-++.++.|.+= ++ -|+--||+||..+. +++.|++.|..+. .+-|+++.+-+-.+|||.+.-+.||+++
T Consensus 147 rKA~R~m~~Aekf-~~-Piit~IDTpGA~pg~~aEe~Gqa~aIA~~l~~~~~l~vP~isvIiGEGgSGGAlal~~ad~v~ 224 (327)
T 2f9i_A 147 RKALRLMKQAEKF-NR-PIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVL 224 (327)
T ss_dssp HHHHHHHHHHHHT-TC-CEEEEEEESCSCCCHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEE
T ss_pred HHHHHHHHHHHHC-CC-CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEE
T ss_conf 9999999999974-99-779984279867887744148999999999998589999799997575553113453378488
Q ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 13013534555653021024567774204225531552112346667899998877777666667789999851499988
Q gi|254780747|r 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 (293)
Q Consensus 123 a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~ 202 (293)
|-++++ |.-+|||....+ +| | +.+
T Consensus 225 mle~a~--------------------------------------ysVisPEg~asI------lw----------k--d~~ 248 (327)
T 2f9i_A 225 MLENST--------------------------------------YSVISPEGAAAL------LW----------K--DSN 248 (327)
T ss_dssp EETTCB--------------------------------------CBSSCHHHHHHH------HS----------S--CGG
T ss_pred EECCEE--------------------------------------EEEECHHHHHHH------HC----------C--CCH
T ss_conf 745718--------------------------------------999566777788------54----------5--812
Q ss_pred HHHHHHCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 998873498237889987798062389
Q gi|254780747|r 203 KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 (293)
Q Consensus 203 ~~~~~~~g~~~~~~~A~~~GLvD~ig~ 229 (293)
...+.++..-.|+++.+++|+||+|-.
T Consensus 249 ~a~eAAe~lklTA~dLl~lGiID~II~ 275 (327)
T 2f9i_A 249 LAKIAAETMKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp GHHHHHHHHTCBHHHHHHTTSSSEEEC
T ss_pred HHHHHHHHCCCCHHHHHHCCCCEEECC
T ss_conf 589999862079999997799728716
No 67
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha chain; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=97.42 E-value=0.00014 Score=47.39 Aligned_cols=120 Identities=18% Similarity=0.238 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHH-------HHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889-------9999999999841-4786799603323322321000111000
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAY-------AGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIV 122 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~-------~~~~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad~I~ 122 (293)
+.-.+.++.|.+ -++ -||--+|+||..+. +++.|++.|..+. .+-|+++.+-+-+.||||+....+|+++
T Consensus 161 rKA~R~m~laek-f~i-PIit~vDTpGa~pG~~aEerG~~~aiA~~l~~~~~l~VP~IsvVigeg~sGGAlam~~~D~vl 238 (339)
T 2f9y_A 161 RKALRLMQMAER-FKM-PIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN 238 (339)
T ss_dssp HHHHHHHHHHHH-TTC-CEEEEEEESCSCCSHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEE
T ss_pred HHHHHHHHHHHH-CCC-CEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCHHH
T ss_conf 999999999997-399-669985279868870002237999999999999769998799997764454321113521431
Q ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 13013534555653021024567774204225531552112346667899998877777666667789999851499988
Q gi|254780747|r 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 (293)
Q Consensus 123 a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~ 202 (293)
|-++++.. -++||.-..+ +|. . .+
T Consensus 239 mle~A~yS--------------------------------------VisPEg~AsI------Lwr----------d--~~ 262 (339)
T 2f9y_A 239 MLQYSTYS--------------------------------------VISPEGCASI------LWK----------S--AD 262 (339)
T ss_dssp ECTTCEEE--------------------------------------SSCHHHHHHH------HSS----------C--ST
T ss_pred CCHHHHHE--------------------------------------EECHHHCHHH------CCC----------C--HH
T ss_conf 23022503--------------------------------------6243321000------047----------7--12
Q ss_pred HHHHHHCCCCCCHHHHHHCCCCCCCC
Q ss_conf 99887349823788998779806238
Q gi|254780747|r 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 (293)
Q Consensus 203 ~~~~~~~g~~~~~~~A~~~GLvD~ig 228 (293)
...+.++..-.|+++.+++|+||+|-
T Consensus 263 ~a~~AAe~lkita~dl~~~giID~II 288 (339)
T 2f9y_A 263 KAPLAAEAMGIIRPRLKELKLIDSII 288 (339)
T ss_dssp THHHHHHHHTCSHHHHHTTTSCSCCC
T ss_pred HHHHHHHHHHHCHHHHHHCCCCEEEE
T ss_conf 45999999873799999779971870
No 68
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=96.46 E-value=0.01 Score=35.61 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=35.7
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 99999999861899879999758888888999999999998414786799603323322
Q gi|254780747|r 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 (293)
Q Consensus 52 ~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~ 110 (293)
++.+.|+...+|++.+.|++.+.+.|-. -+.+.+++++.+.+|||++|..+..+.+
T Consensus 210 ~~~D~L~~~~~Dp~Tk~Ivly~E~~g~~---e~~~a~~~k~~~~~KPVVa~kaGrsa~~ 265 (334)
T 3mwd_B 210 TFMDHVLRYQDTPGVKMIVVLGEIGGTE---EYKICRGIKEGRLTKPIVCWCIGTCATM 265 (334)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSH---HHHHHHHHHTTSCCSCEEEEEECTTCC-
T ss_pred CHHHHHHHHCCCCCCCEEEEECCCCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 4999999864499984999984547837---9999999985589998899997326777
No 69
>3ff6_A Acetyl-COA carboxylase 2; ACC2, ACC, metabolic disorder, fatty acid metabolism, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis; HET: RCP; 3.19A {Homo sapiens}
Probab=96.39 E-value=0.052 Score=31.25 Aligned_cols=173 Identities=12% Similarity=0.106 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH-------HHHHHHHHHC-CCCCEEEEECCCCC-CCCCCCCCC----
Q ss_conf 9999999998618998799997588888889999-------9999999841-47867996033233-223210001----
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE-------AIFRAIQKVK-NRKPVITEVHEMAA-SAGYLISCA---- 117 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~-------~i~~ai~~~k-~~kpvva~~~~~~~-S~~Y~iAs~---- 117 (293)
+...+.|+.+.. .++ -|+.-+|.||-++...+ ..++.+..+. .+.|+++++...+. -||.|+++.
T Consensus 444 ~KaArfI~lcd~-~~l-PLv~LvD~pGF~~G~~~E~~Gilk~GA~iv~Ala~~~vP~itvI~~~g~~~GGa~vv~~~~~~ 521 (760)
T 3ff6_A 444 YKTAQAIKDFNR-EKL-PLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRQYKQPILIYIPPYAELRGGSWVVIDATIN 521 (760)
T ss_dssp HHHHHHHHHHHH-TTC-CEEEECCCCCBCCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGS
T ss_pred HHHHHHHHHHCC-CCC-CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCEEECCCCCC
T ss_conf 999999998454-699-859995488766668999848999999999999708998799995873533644464166557
Q ss_pred --CCCCCCCHHHHHHHHHH---HHCCCHHHHHHH---HHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --11000130135345556---530210245677---7420422553155211234666789999887777766666778
Q gi|254780747|r 118 --SNIIVAAETSLVGSIGV---LFQYPYVKPFLD---KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 (293)
Q Consensus 118 --ad~I~a~p~s~vGsiGv---~~~~~~~~~ll~---k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f 189 (293)
++..||-|++.+|.+|. ..-.+--+...+ .+.-.+. +.+....- ...+++++..++..+....+..
T Consensus 522 ~~~~~vyAwp~A~~gVl~pegav~I~fr~~~~~~~~~r~d~~~~-----~l~~~l~~-~~~~~~~~~~~~~~~~~re~~l 595 (760)
T 3ff6_A 522 PLCIEMYADKESRGGVLEPEGTVEIKFRKKDLIKSMRRIDPAYK-----KLMEQLGE-PDLSDKDRKDLEGRLKAREDLL 595 (760)
T ss_dssp TTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHHCGGGG-----HHHHHHTS-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHH-----HHHHHHCC-CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 76655888662006347899987867501544433310005677-----88887414-4433567888999999999887
Q ss_pred HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 99998514999889988734982378899877980623898999999997
Q gi|254780747|r 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 (293)
Q Consensus 190 ~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~ 239 (293)
..... +...++++ ..-++..|.+.|.||+|-...+...+++.
T Consensus 596 ~~~y~-------~va~~fad-lhd~~~raa~~G~Id~vI~p~~tR~~l~~ 637 (760)
T 3ff6_A 596 LPIYH-------QVAVQFAD-FHDTPGRMLEKGVISDILEWKTARTFLYW 637 (760)
T ss_dssp HHHHH-------HHHHHHHH-HHSSHHHHHHTTSSSEEECGGGHHHHHHH
T ss_pred HHHHH-------HHHHHHHH-HHCCHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 78889-------99999998-51689999965817730585999999999
No 70
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=94.88 E-value=0.036 Score=32.21 Aligned_cols=53 Identities=15% Similarity=0.240 Sum_probs=23.9
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC---CCCCEEEEECCCCC
Q ss_conf 999999986189987999975888888899999999999841---47867996033233
Q gi|254780747|r 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAA 108 (293)
Q Consensus 53 l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k---~~kpvva~~~~~~~ 108 (293)
+.+.|+...+|++.++|++.+.+.|-.-. ..++.++..+ .+|||+++..+..+
T Consensus 195 ~~D~L~~l~~Dp~Tk~I~ly~E~~~~~e~---~~~~~~~a~~~~~~~KPVVa~k~Grsa 250 (305)
T 2fp4_A 195 FTDCLEIFLNDPATEGIILIGEIGGNAEE---NAAEFLKQHNSGPKSKPVVSFIAGLTA 250 (305)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEESSSSHHH---HHHHHHHHHSCSTTCCCEEEEEECTTC
T ss_pred HHHHHHHHHCCCCCCEEEEEEEECCCHHH---HHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 89999998549887389999864474677---888999999746778757999832447
No 71
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=94.82 E-value=0.052 Score=31.21 Aligned_cols=125 Identities=13% Similarity=0.180 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCH-------HHHHHHHHHHHHHCC-CCCEEEEECCCC-CCCCCCCCCCCCCC
Q ss_conf 999999999861899879999758888888-------999999999998414-786799603323-32232100011100
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSA-------YAGEAIFRAIQKVKN-RKPVITEVHEMA-ASAGYLISCASNII 121 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~-------~~~~~i~~ai~~~k~-~kpvva~~~~~~-~S~~Y~iAs~ad~I 121 (293)
+.+.+.++.|.+. ++- +|.-.+|.|+-. .+...+..++.++++ +.|.++.+.+-+ ..+.|..++.+|-|
T Consensus 143 eki~ra~e~A~~~-~lP-~I~~~~SGGaRmqeg~~sl~~~~~~~~a~~~~~~~gip~I~v~~~p~~GG~~as~a~~~dii 220 (285)
T 2f9i_B 143 EKICRIIDYCTEN-RLP-FILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDIN 220 (285)
T ss_dssp HHHHHHHHHHHHT-TCC-EEEEEEECSCCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEE
T ss_pred HHHHHHHHHHHHC-CCC-EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEE
T ss_conf 9999999999851-897-69981587818476331045552999999999868997699983884500321223177489
Q ss_pred CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 01301353455565302102456777420422553155211234666789999887777766666778999985149998
Q gi|254780747|r 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 (293)
Q Consensus 122 ~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~ 201 (293)
++.|.+.+|.-|-. .++.. .+..++
T Consensus 221 i~e~~a~i~faGPr-----------------------------------------Vi~~~-------------~ge~~p- 245 (285)
T 2f9i_B 221 LSEPKALIGFAGRR-----------------------------------------VIEQT-------------INEKLP- 245 (285)
T ss_dssp EECTTCBEESSCHH-----------------------------------------HHHHH-------------HTSCCC-
T ss_pred EEECCEEEEEECHH-----------------------------------------HHHHH-------------HCCCCC-
T ss_conf 98577189987875-----------------------------------------78786-------------189898-
Q ss_pred HHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 899887349823788998779806238989999999974
Q gi|254780747|r 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 202 ~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
...-+++-+++.|.||.+...++....+..+
T Consensus 246 --------e~f~~a~~~~~~G~iD~vv~r~e~r~~l~~l 276 (285)
T 2f9i_B 246 --------DDFQTAEFLLEHGQLDKVVHRNDMRQTLSEI 276 (285)
T ss_dssp --------TTTTBHHHHHHTTCCSEECCGGGHHHHHHHH
T ss_pred --------CCCCCHHHHHHCCCCCEEECHHHHHHHHHHH
T ss_conf --------2323458899667867687679999999999
No 72
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase alpha subunit; lyase; 2.20A {Sulfolobus tokodaii str}
Probab=94.65 E-value=0.022 Score=33.55 Aligned_cols=27 Identities=22% Similarity=0.242 Sum_probs=12.5
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 867996033233223210001110001
Q gi|254780747|r 97 KPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 97 kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
.|+++.+.+.|+.|+.|....+|.++|
T Consensus 164 iP~Isvv~G~~~gG~a~~~~~~d~vim 190 (522)
T 1x0u_A 164 IPQITIMAGPAAGGAVYSPALTDFIIM 190 (522)
T ss_dssp SCEEEEECSEEEGGGGHHHHHSSEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHCCCEEE
T ss_conf 977998147887105232664672122
No 73
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.00A {Bacteroides fragilis nctc 9343}
Probab=94.57 E-value=0.14 Score=28.45 Aligned_cols=85 Identities=11% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCEEEEEEEEEEECC--------HHHHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHC-----------
Q ss_conf 872899997666238--------699999999986189987999975-888888899999999999841-----------
Q gi|254780747|r 35 SPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVK----------- 94 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~--------~~~l~~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k----------- 94 (293)
.++|+.|.+..-... .+++.+.++.+.. .+++++||++ +.|||.+..+..+...+..-.
T Consensus 186 ~~~iGYI~i~~F~~~~~~~~~~~~~~l~~a~~~l~~-~~~~~lIlDLR~N~GG~~~~a~~l~~~~~~~~~~~~~~~~~~~ 264 (403)
T 3k50_A 186 GKKVGYLMYNEFKAGPTTDSQAYNDDLRRAFRDFQT-GGVNEFVLDLRYNTGGSLDCAQLLCTMLAPADKMNQLLALLRY 264 (403)
T ss_dssp TEEEEEEEECCBCCCSSTTCCHHHHHHHHHHHHHHH-TTCCEEEEECTTCCCBCHHHHHHHHHHHSCGGGTTSEEEEEEC
T ss_pred CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH-CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 982899998520152230257789999999998763-3466359985468997489999999865568852458899983
Q ss_pred -------------------C-----CCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf -------------------4-----7867996033233223210001110
Q gi|254780747|r 95 -------------------N-----RKPVITEVHEMAASAGYLISCASNI 120 (293)
Q Consensus 95 -------------------~-----~kpvva~~~~~~~S~~Y~iAs~ad~ 120 (293)
. .+|+++.+++.++|++=.+|.+-..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vLvn~~TaSaaE~~a~~lk~ 314 (403)
T 3k50_A 265 SDKRVEANQDLTFNPELIQSGANLNLSTVYVLTTNATRGAAEMVINCLNP 314 (403)
T ss_dssp CTTCGGGCEEEECCGGGTTTSCCCCCSEEEEEECTTCCTHHHHHHHHHTT
T ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 57511456513125433567653467878999899952689998755764
No 74
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix K1}
Probab=94.41 E-value=0.096 Score=29.56 Aligned_cols=40 Identities=5% Similarity=-0.056 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8699999999986189987999975888888899999999999
Q gi|254780747|r 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 (293)
Q Consensus 49 ~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~ 91 (293)
..+.+.+.++++.+ ..|+++++--. |-.....+++.+..+
T Consensus 80 Pa~~v~~~v~e~~~-~Gvk~~viita--Gf~e~~~~~l~~~a~ 119 (297)
T 2yv2_A 80 PAPFAPDAVYEAVD-AGIRLVVVITE--GIPVHDTMRFVNYAR 119 (297)
T ss_dssp CGGGHHHHHHHHHH-TTCSEEEECCC--CCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECC--CCCCHHHHHHHHHHH
T ss_conf 73100999999987-79988999679--988053799999766
No 75
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Thermotoga maritima MSB8} SCOP: c.14.1.4 c.14.1.4
Probab=94.34 E-value=0.08 Score=30.07 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=17.6
Q ss_pred CCCEEEEECCCCCCCCCCCCCC----CCCCCCCHHHHHHHH
Q ss_conf 7867996033233223210001----110001301353455
Q gi|254780747|r 96 RKPVITEVHEMAASAGYLISCA----SNIIVAAETSLVGSI 132 (293)
Q Consensus 96 ~kpvva~~~~~~~S~~Y~iAs~----ad~I~a~p~s~vGsi 132 (293)
..|+++++-+-+.++||+..+. +|.+||-|++.+|.+
T Consensus 403 ~vP~i~vi~gk~~Ggg~~am~~~~~~~d~~~Awp~a~~~vm 443 (527)
T 1vrg_A 403 TVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVM 443 (527)
T ss_dssp CSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESS
T ss_pred CCCEEEEEECCCCCHHHHHCCCCCCCCCEEEECCCCEEEEC
T ss_conf 99879998688665877610677778888999787718616
No 76
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=94.33 E-value=0.12 Score=28.96 Aligned_cols=56 Identities=21% Similarity=0.303 Sum_probs=30.8
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 999999998618998799997588888889999999999984147867996033233223
Q gi|254780747|r 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 (293)
Q Consensus 52 ~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~ 111 (293)
+..+.|+...+|++.+.|++++.+.|-.- ..+..+ ++.+.+|||+++..+..+.++
T Consensus 186 ~~~D~l~~l~~D~~T~~I~ly~E~~~~~~---~f~~~a-~~~~~~KPVV~lk~Grsa~~~ 241 (288)
T 2nu8_A 186 NFIDILEMFEKDPQTEAIVMIGEIGGSAE---EEAAAY-IKEHVTKPVVGYIAGVTAPKG 241 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSHH---HHHHHH-HHHHCCSCEEEEEECTTCCTT
T ss_pred CHHHHHHHHHHCCCCCEEEEEEEECCCHH---HHHHHH-HHHHCCCCEEEEEECCCCCCC
T ss_conf 39999999864668728999997368889---999999-998658987999834668876
No 77
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=94.23 E-value=0.049 Score=31.39 Aligned_cols=81 Identities=15% Similarity=0.177 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHH-------HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889-------999999999984147867996033233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAY-------AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~-------~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
+.+.+.++.|.+. ++ -+|.-++|.|+... +.-.+...+.+.+...|.++.+.+.|+.|+.|++..||.++|
T Consensus 117 ~K~~~~~~~A~~~-~~-P~V~l~dsgG~rl~e~~~~l~~~~~~~~~~~~~sg~vP~Isvv~G~~~gG~a~~~~~~d~vIm 194 (523)
T 1on3_A 117 TKVVETMEQALLT-GT-PFLFFYDSGGARIQEGIDSLSGYGKMFFANVKLSGVVPQIAIIAGPCAGGASYSPALTDFIIM 194 (523)
T ss_dssp HHHHHHHHHHHHH-TC-CEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEESGGGHHHHHSSEEEE
T ss_pred HHHHHHHHHHHHC-CC-CEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCEEEE
T ss_conf 7898899999866-89-889998068986654422032125999999985077977999707886340200123838998
Q ss_pred CHHHHHHHHH
Q ss_conf 3013534555
Q gi|254780747|r 124 AETSLVGSIG 133 (293)
Q Consensus 124 ~p~s~vGsiG 133 (293)
.+.+.++.-|
T Consensus 195 ~~~a~l~l~G 204 (523)
T 1on3_A 195 TKKAHMFITG 204 (523)
T ss_dssp ETTCEEESSC
T ss_pred ECCEEEEECC
T ss_conf 1560488428
No 78
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, cytoplasm, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=94.13 E-value=0.19 Score=27.68 Aligned_cols=172 Identities=9% Similarity=0.079 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH-------HHHHHHHHHC-CCCCEEEEECCCC-CCCCCCCCCCCC--
Q ss_conf 9999999998618998799997588888889999-------9999999841-4786799603323-322321000111--
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE-------AIFRAIQKVK-NRKPVITEVHEMA-ASAGYLISCASN-- 119 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~-------~i~~ai~~~k-~~kpvva~~~~~~-~S~~Y~iAs~ad-- 119 (293)
....+.|+...+..++ -|+.-+|.||-++...+ ..++.+..+. ...|+++++.... +-||-|+++...
T Consensus 455 ~K~ArfI~~lcd~~~L-PLv~LvDtpGF~~G~~aE~~Giik~GA~iv~Ala~a~vP~itvI~~~g~~~GGayvv~~~~~~ 533 (758)
T 3k8x_A 455 FKTAQAINDFNNGEQL-PMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTIN 533 (758)
T ss_dssp HHHHHHHHHHHHTSCC-CEEECCCCCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEETHHHHTTCGGGS
T ss_pred HHHHHHHHHHHHHCCC-CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCHHHHHCCCCCC
T ss_conf 9999999999861288-669997188877678999833999999999999758998799994774451212542376547
Q ss_pred ----CCCCCHHHHHHHHHH---HHCCCHHH---HHHHHHHHCCEEEEECCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ----000130135345556---53021024---5677742042255315521123-466678999988777776666677
Q gi|254780747|r 120 ----IIVAAETSLVGSIGV---LFQYPYVK---PFLDKLGVSIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHW 188 (293)
Q Consensus 120 ----~I~a~p~s~vGsiGv---~~~~~~~~---~ll~k~gi~~~~~~~g~~K~~~-~p~~~~s~e~~~~~~~~l~~~~~~ 188 (293)
+.||-|++.+|.+|. +.-.+--+ +..++..-++ .+|+... +|+ .++++++.+++.+....++
T Consensus 534 ~~~~~vyAwp~A~~gVm~pEgav~I~fR~e~~~~~~~r~d~~~-----~el~~~l~~~~--~aae~~~~~~~~~~~re~~ 606 (758)
T 3k8x_A 534 ADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKY-----RELRSQLSNKS--LAPEVHQQISKQLADRERE 606 (758)
T ss_dssp TTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHHCSCC-----CCC-----------------------------
T ss_pred CCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHH-----HHHHHHHCCCC--CCHHHHHHHHHHHHHHHHH
T ss_conf 7655377867203881789999897816411003522169999-----99999863943--2656688899999999998
Q ss_pred HHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 89999851499988998873498237889987798062389899999999
Q gi|254780747|r 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 (293)
Q Consensus 189 f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~ 238 (293)
...... +...++++ ..-+...+++.|.||++-...+...+++
T Consensus 607 l~~~y~-------~va~~fa~-lhd~~~rm~a~G~I~~vi~~~~tR~~~~ 648 (758)
T 3k8x_A 607 LLPIYG-------QISLQFAD-LHDRSSRMVAKGVISKELEWTEARRFFF 648 (758)
T ss_dssp -HHHHH-------HHHHHHHH-TTSBHHHHHHHTCSSEEECGGGHHHHHH
T ss_pred HHHHHH-------HHHHHHHH-HCCCHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 778899-------99999998-3085877875283773328788799999
No 79
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=92.80 E-value=0.31 Score=26.33 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 699999999986189987999975888888899999999999
Q gi|254780747|r 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 (293)
Q Consensus 50 ~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~ 91 (293)
.+.+.+.++++.+ ..++++++.-. |-.-...+++.+..+
T Consensus 74 a~~v~~~~~e~~~-~Gvk~~vi~s~--Gf~E~~~~~l~~~a~ 112 (288)
T 1oi7_A 74 APAAADAALEAAH-AGIPLIVLITE--GIPTLDMVRAVEEIK 112 (288)
T ss_dssp HHHHHHHHHHHHH-TTCSEEEECCS--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCCEEEEECC--CCCCCCHHHHHHHHC
T ss_conf 8999999999986-79988999558--987446788976412
No 80
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=92.78 E-value=0.26 Score=26.87 Aligned_cols=142 Identities=16% Similarity=0.146 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH-------HHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCC----CC
Q ss_conf 9999999998618998799997588888889999-------9999999841-4786799603323322321000----11
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE-------AIFRAIQKVK-NRKPVITEVHEMAASAGYLISC----AS 118 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~-------~i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs----~a 118 (293)
+...+.++-+.. -++ -||.-+|+||-.+.... .+++.+..+. ..-|.++.+-..+.++||+..+ .+
T Consensus 348 ~Kaarfi~lcd~-~~i-Plv~lvD~pGf~~G~~~E~~Gi~~~gA~~~~A~a~a~vP~isvi~~k~~G~g~~am~~~~~~~ 425 (523)
T 1on3_A 348 DKAAEFVNFCDS-FNI-PLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGA 425 (523)
T ss_dssp HHHHHHHHHHHH-TTC-CEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTC
T ss_pred HHHHHHHHHHHH-CCC-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCCCCCC
T ss_conf 999999998874-287-789994278767778999976999999999985367998799985774450231246777887
Q ss_pred CCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 10001301353455565302-10245677742042255315521123466678999988777776666677899998514
Q gi|254780747|r 119 NIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 (293)
Q Consensus 119 d~I~a~p~s~vGsiGv~~~~-~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R 197 (293)
|.+||-|++.++.+|.-... .-|++-+ +.. -.++.+ ..+.++
T Consensus 426 d~~~AwP~a~~~vm~pegaa~i~~r~~~---------------~a~------~~~~~~--~~~~~~-------------- 468 (523)
T 1on3_A 426 DAVYAWPSAEIAVMGAEGAANVIFRKEI---------------KAA------DDPDAM--RAEKIE-------------- 468 (523)
T ss_dssp SEEEECTTCEEESSCHHHHHHHHTHHHH---------------HHS------SCHHHH--HHHHHH--------------
T ss_pred CEEEECCCCEEEECCHHHHHHHHHCCCC---------------CCC------CCHHHH--HHHHHH--------------
T ss_conf 8799867555984599999998741210---------------176------798999--999999--------------
Q ss_pred CCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9998899887349823788998779806238989999999974
Q gi|254780747|r 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 (293)
Q Consensus 198 ~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~ 240 (293)
++.+ ..-++-.|.+.|.||+|-.-.|..+++..-
T Consensus 469 --------~~~~-~~~~~~~aa~~g~iD~VIdP~~TR~~l~~~ 502 (523)
T 1on3_A 469 --------EYQN-AFNTPYVAAARGQVDDVIDPADTRRKIASA 502 (523)
T ss_dssp --------HHHH-HHSSHHHHHHTTSSSEECCGGGHHHHHHHH
T ss_pred --------HHHH-HHCCHHHHHHCCCCCEEECHHHHHHHHHHH
T ss_conf --------9998-757999998667888428879999999999
No 81
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=92.60 E-value=0.26 Score=26.80 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=51.6
Q ss_pred CCEEEEEEEEEEECCH-----------------------HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8728999976662386-----------------------99999999986189987999975888888899999999999
Q gi|254780747|r 35 SPHVARIAIRGQIEDS-----------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~~-----------------------~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~ 91 (293)
..+|++|.=+|.+... -++.+.++...+|++.+.|++++.+.+.. ++..++.+
T Consensus 149 ~G~ialvsqSG~l~~~i~~~~~~~g~G~s~~vs~Gn~~~v~~~d~l~~l~~D~~t~~I~l~~E~~~~~----~~f~~aa~ 224 (457)
T 2csu_A 149 KGNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMADVDFAELMEYLADTEEDKAIALYIEGVRNG----KKFMEVAK 224 (457)
T ss_dssp ECSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCCSSCHHHHHHHHTTCSSCCEEEEEESCCSCH----HHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCH----HHHHHHHH
T ss_conf 99779996672599999999996488814898348867878899999960699874799999557557----89999999
Q ss_pred HHCCCCCEEEEECCCCCCCC
Q ss_conf 84147867996033233223
Q gi|254780747|r 92 KVKNRKPVITEVHEMAASAG 111 (293)
Q Consensus 92 ~~k~~kpvva~~~~~~~S~~ 111 (293)
+.+.+||++++-.+....++
T Consensus 225 ~a~~~kpvvvlk~Grs~~g~ 244 (457)
T 2csu_A 225 RVTKKKPIIALKAGKSESGA 244 (457)
T ss_dssp HHHHHSCEEEEECC------
T ss_pred HHHCCCCEEEEECCCCCCCC
T ss_conf 98668998999577776553
No 82
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii DSM2661}
Probab=92.26 E-value=0.28 Score=26.65 Aligned_cols=21 Identities=5% Similarity=-0.046 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 9999999998618998799997
Q gi|254780747|r 51 QELIERIERISRDDSATALIVS 72 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~ 72 (293)
..+.+.+++|.+ ..|+++++-
T Consensus 81 ~~v~~a~~ea~~-~Gvk~~vii 101 (294)
T 2yv1_A 81 PFAKDAVFEAID-AGIELIVVI 101 (294)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEC
T ss_pred HHHHHHHHHHHH-CCCCEEEEE
T ss_conf 678999999997-699689997
No 83
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=91.92 E-value=0.14 Score=28.45 Aligned_cols=52 Identities=25% Similarity=0.285 Sum_probs=34.1
Q ss_pred EEEEEEEEEEEC-----------C-HHHHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHH
Q ss_conf 289999766623-----------8-699999999986189987999975-88888889999999999
Q gi|254780747|r 37 HVARIAIRGQIE-----------D-SQELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 (293)
Q Consensus 37 ~i~~i~i~G~I~-----------~-~~~l~~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai 90 (293)
.|++|.|..=-. + .+++.+.|+...+ +++++|+++ +.+||+...+..|...+
T Consensus 292 ~IgyI~I~sF~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~LIIDLR~NgGG~~~~~~~L~~~l 356 (583)
T 3dor_A 292 KVGFLRIPTYSWQDMEDFDPSGPPPWEEFAKIIQVFSS--NTEALIIDQTNNPGGSVLYLYALLSML 356 (583)
T ss_dssp EEEEEECCCBCGGGSTTCCTTSCCHHHHHHHHHHHHHH--HCSEEEEECCSBCCBCHHHHHHHHHTT
T ss_pred EEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 28999925556312331103445699999999998760--686399995589997388999999998
No 84
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=90.84 E-value=0.8 Score=23.77 Aligned_cols=85 Identities=15% Similarity=0.232 Sum_probs=56.1
Q ss_pred CCEEEEEEEEEEECCH-HHHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHH-------------------
Q ss_conf 8728999976662386-99999999986189987999975-88888889999999999984-------------------
Q gi|254780747|r 35 SPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKV------------------- 93 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~~-~~l~~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~------------------- 93 (293)
.+.|+.|++...-... .++.+.+.... ..+++++||++ +.+||....+..+...+...
T Consensus 198 ~~~igYi~~~~~~~~~~~~~~~~~~~~~-~~~~~~lIiDlR~N~GG~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 276 (388)
T 1fc6_A 198 KQQLGYVRLATFNSNTTAAAQQAFTELS-KQGVAGLVLDIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSAD 276 (388)
T ss_dssp SSCEEEEEECCBSTTHHHHHHHHHHHHH-HTTCSEEEEECTTCCCBCHHHHHHHHHHHCSSSEEEEEEETTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
T ss_conf 5737999811333122699999999877-643043254123376530588999998633579569996477431112244
Q ss_pred ----CCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf ----147867996033233223210001110
Q gi|254780747|r 94 ----KNRKPVITEVHEMAASAGYLISCASNI 120 (293)
Q Consensus 94 ----k~~kpvva~~~~~~~S~~Y~iAs~ad~ 120 (293)
.-.+|+++.++...+|++=.+|.++..
T Consensus 277 ~~~~~~~~pivvLv~~~TaSaaE~~a~~lk~ 307 (388)
T 1fc6_A 277 GNSIDSATPLVVLVNRGTASASEVLAGALKD 307 (388)
T ss_dssp SCCSCSSSCEEEEECTTCCTHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 5542345238997268874179999999864
No 85
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=90.55 E-value=0.4 Score=25.63 Aligned_cols=81 Identities=17% Similarity=0.246 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCH-------HHHHHHHHHHHHHCC-CCCEEEEECCCCCCCC-CCCCCCCCCC
Q ss_conf 999999999861899879999758888888-------999999999998414-7867996033233223-2100011100
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSA-------YAGEAIFRAIQKVKN-RKPVITEVHEMAASAG-YLISCASNII 121 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~-------~~~~~i~~ai~~~k~-~kpvva~~~~~~~S~~-Y~iAs~ad~I 121 (293)
+.+.+..+.|.+. ++- +|.-.+|.|+.. .+......++..+++ +-|.++.+.+-++.|+ |..|+.+|-|
T Consensus 140 eKi~ra~e~A~~~-~lP-lI~l~~SgGaRm~eg~~sl~~~~~~~~~~~~~~~~~iP~I~v~~gp~~GG~~as~a~~~d~i 217 (304)
T 2f9y_B 140 ARFVRAVEQALED-NCP-LICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLN 217 (304)
T ss_dssp HHHHHHHHHHHHH-TCC-EEEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEE
T ss_pred HHHHHHHHHHHHC-CCC-EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEE
T ss_conf 5633599999972-997-69984588803555552000246799999999818997799966896613412636477489
Q ss_pred CCCHHHHHHHHH
Q ss_conf 013013534555
Q gi|254780747|r 122 VAAETSLVGSIG 133 (293)
Q Consensus 122 ~a~p~s~vGsiG 133 (293)
++.|.+.++.-|
T Consensus 218 i~~~~a~i~~aG 229 (304)
T 2f9y_B 218 IAEPKALIGFAG 229 (304)
T ss_dssp EECTTCBEESSC
T ss_pred EEECCCCCCCCC
T ss_conf 995540003658
No 86
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=89.50 E-value=1 Score=23.08 Aligned_cols=69 Identities=9% Similarity=0.101 Sum_probs=51.0
Q ss_pred CCCEEEEEEEEEEEC--CHHHHHHHHHHH---HCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 787289999766623--869999999998---618998799997588-888889999999999984147867996
Q gi|254780747|r 34 NSPHVARIAIRGQIE--DSQELIERIERI---SRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITE 102 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~--~~~~l~~~l~~a---~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~~kpvva~ 102 (293)
.-|.|.++.++|++. +.+.+.+.|.+. ...+.++.|+|+..+ +.-+.++.+.+.+.++++++.+-.+.+
T Consensus 27 ~~p~v~I~r~~g~L~F~na~~~~~~i~~~~~~~~~~~~k~vVld~~~v~~iD~tg~~~L~~l~~~l~~~gi~l~l 101 (143)
T 3llo_A 27 EIPGIKIFQINAPIYYANSDLYSSALKRKTGVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYL 101 (143)
T ss_dssp CCTTEEEEEECSCHHHHHHHHHHHC-----------CCSEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEEECCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 569999998489857712288888876664202579825999996689858879999999999999977999999
No 87
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 1xny_A* 1xnv_A* 1xo6_A
Probab=89.36 E-value=0.79 Score=23.78 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCH-------HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999861899879999758888888-------9999999999984147867996033233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSA-------YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~-------~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
+.+.+.++.|.+. ++ -+|.-.+|.|+-. .+...+...+.+.+...|.++.+.+.|..|+.|....+|.++|
T Consensus 119 ~K~~r~~~~A~~~-~l-P~V~l~~sgGar~~e~~~~~~~~~~~~~~~~~~s~~iP~isvv~G~~~gG~A~~~~~~d~~im 196 (530)
T 3iav_A 119 QKIVKVMDFALKT-GC-PVVGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDFTVM 196 (530)
T ss_dssp HHHHHHHHHHHHH-TC-CEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSEEEGGGGHHHHHSSEEEE
T ss_pred HHHHHHHHHHHHC-CC-CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCEEEE
T ss_conf 9998999999865-99-989995268877665644455530799999986589988999626876245440453771698
Q ss_pred -CHHHHHHH
Q ss_conf -30135345
Q gi|254780747|r 124 -AETSLVGS 131 (293)
Q Consensus 124 -~p~s~vGs 131 (293)
.+++.++.
T Consensus 197 ~~~~a~i~~ 205 (530)
T 3iav_A 197 VDQTSHMFI 205 (530)
T ss_dssp ETTTCEEES
T ss_pred ECCCCEEEE
T ss_conf 516750872
No 88
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=88.83 E-value=0.31 Score=26.32 Aligned_cols=81 Identities=19% Similarity=0.179 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH----------HHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 99999999986189987999975888888899999----------999999841-4786799603323322321000111
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEA----------IFRAIQKVK-NRKPVITEVHEMAASAGYLISCASN 119 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~----------i~~ai~~~k-~~kpvva~~~~~~~S~~Y~iAs~ad 119 (293)
+.+.+..+.|.+. ++ -+|.-++|+|+......+ +...+.... .+.|+++.+.+.|++|+.|.+..+|
T Consensus 127 ~K~~r~~~lA~~~-~l-P~I~l~ds~Garl~e~~~~~~~~~~~g~~~~~~~~~s~~~vP~Isvv~G~~~gGgA~~~~s~~ 204 (587)
T 1pix_A 127 ECLLRASDTAKTL-HV-PLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGGGYHSISPT 204 (587)
T ss_dssp HHHHHHHHHHHHH-TC-CEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHHHHSSS
T ss_pred HHHHHHHHHHHHC-CC-CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCE
T ss_conf 9999999999982-99-989995578876665134410054564999999998469985675035786764201100021
Q ss_pred CCCCCHHHHHHHHH
Q ss_conf 00013013534555
Q gi|254780747|r 120 IIVAAETSLVGSIG 133 (293)
Q Consensus 120 ~I~a~p~s~vGsiG 133 (293)
.|++.+.+.++.-|
T Consensus 205 ~ii~~~~s~i~laG 218 (587)
T 1pix_A 205 VIIAHEKANMAVGG 218 (587)
T ss_dssp EEEEETTCEEESCC
T ss_pred EEEEECCEEEEECC
T ss_conf 68872443799507
No 89
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans och 114}
Probab=87.74 E-value=1.2 Score=22.59 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCH-------HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999861899879999758888888-------9999999999984147867996033233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSA-------YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~-------~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
+.+.+..+.|.+ .++- +|.-++|.|+.. .+.-.+.....+.+...|.++.+.+.|+.++.|....||.++|
T Consensus 127 ~K~~ra~e~A~~-~~lP-lV~l~dsgGarl~eg~~~l~~~~~~~~~~~~~s~~iP~Isvv~Gp~~Gg~A~~~a~sd~vim 204 (531)
T 3n6r_B 127 KKICKIMDMAMQ-NGAP-VIGINDSGGARIQEGVDSLAGYGEVFQRNIMASGVVPQISMIMGPCAGGAVYSPAMTDFIFM 204 (531)
T ss_dssp HHHHHHHHHHHH-HTCC-EEEEECCCCBCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSCCBGGGGHHHHHSSEEEE
T ss_pred HHHHHHHHHHHH-CCCC-EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEEE
T ss_conf 999999999998-4998-79961478877554522234424899999986689988999816875088733766875899
Q ss_pred -CHHHHHH
Q ss_conf -3013534
Q gi|254780747|r 124 -AETSLVG 130 (293)
Q Consensus 124 -~p~s~vG 130 (293)
.+.+.++
T Consensus 205 ~~~~a~if 212 (531)
T 3n6r_B 205 VKDSSYMF 212 (531)
T ss_dssp ETTTCBCB
T ss_pred EECCEEEE
T ss_conf 71660488
No 90
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=86.61 E-value=1.6 Score=21.94 Aligned_cols=67 Identities=13% Similarity=0.279 Sum_probs=50.8
Q ss_pred CCEEEEEEEEEEECC--HHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCCC-CCEEE
Q ss_conf 872899997666238--69999999998618998799997588-888889999999999984147-86799
Q gi|254780747|r 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVIT 101 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~--~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~~-kpvva 101 (293)
.+.+.++.++|.+.. ..++.+.+.++.+.+..+.+++++.. ..-+.++...+....++++++ +.++.
T Consensus 10 ~~~v~vv~l~G~l~~~~~~~l~~~l~~~~~~~~~~~liiDl~~v~~idssgl~~L~~~~~~~~~~g~~l~l 80 (116)
T 1th8_B 10 KQDVLIVRLSGELDHHTAEELREQVTDVLENRAIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVV 80 (116)
T ss_dssp ETTEEEEEEEEEESHHHHHHHHHHHHHHHHSSCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 89999999999999899999999999999718996999995698351679999999999999958998999
No 91
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=86.14 E-value=1.2 Score=22.55 Aligned_cols=137 Identities=15% Similarity=0.127 Sum_probs=56.7
Q ss_pred ECCHHHHHHHHHHHHCCCCCCEEEEECC--CCC----C------CHHHHHHHHHHHHHH-----C---CCCC-EEEEE-C
Q ss_conf 2386999999999861899879999758--888----8------889999999999984-----1---4786-79960-3
Q gi|254780747|r 47 IEDSQELIERIERISRDDSATALIVSLS--SPG----G------SAYAGEAIFRAIQKV-----K---NRKP-VITEV-H 104 (293)
Q Consensus 47 I~~~~~l~~~l~~a~~d~~ik~ivL~i~--SpG----G------~~~~~~~i~~ai~~~-----k---~~kp-vva~~-~ 104 (293)
+.+.+++.+..+++..+ .+|+.-. ..| | ++..+.+..+.+..- + +++| -..++ +
T Consensus 25 ~~~~~e~~~~~~~l~~~----~~VvKaQvlaGGRGKaGGVki~~s~~ea~~~a~~~lg~~l~t~qt~~~G~~v~~vlvee 100 (388)
T 2nu8_B 25 CTTPREAEEAASKIGAG----PWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEA 100 (388)
T ss_dssp ESSHHHHHHHHHHHCSS----CEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSEECCTTSCTTCEECCCEEEEE
T ss_pred ECCHHHHHHHHHHHCCC----CEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEEC
T ss_conf 89999999999986899----59998552478876667179969999999999998473201313477882766999970
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC--------CCCCHHHHH
Q ss_conf 323322321000111000130135345556530210245677742042255315521123466--------678999988
Q gi|254780747|r 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--------SEVNPKAVQ 176 (293)
Q Consensus 105 ~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~--------~~~s~e~~~ 176 (293)
.....-.||++..-|+-.-.|.=+... ....+..+.-++.--....+..-+.. ...++ -....+..+
T Consensus 101 ~~~i~~E~Ylsi~~Dr~~~~~~ii~S~----~GGvdIEeva~~~p~~i~~~~id~~~-g~~~~~~~~~~~~lg~~~~~~~ 175 (388)
T 2nu8_B 101 ATDIAKELYLGAVVDRSSRRVVFMAST----EGGVEIEKVAEETPHLIHKVALDPLT-GPMPYQGRELAFKLGLEGKLVQ 175 (388)
T ss_dssp CCCEEEEEEEEEEEETTTTEEEEEEES----CTTSCHHHHHHHCGGGEEEEECBTTT-BCCHHHHHHHHHHTTCCTHHHH
T ss_pred CCCCCCCEEEEEEECCCCCCEEEEEEC----CCCCCHHHHHHHCCCCCCCEEECCCC-CCCHHHHHHHHHHCCCCHHHHH
T ss_conf 357650069999963777826999856----89974655445384523003567455-7887999999986499737789
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 7777766666778999
Q gi|254780747|r 177 MMQDVVDSSYHWFVRL 192 (293)
Q Consensus 177 ~~~~~l~~~~~~f~~~ 192 (293)
.+...+..+|..|.+.
T Consensus 176 ~~~~~i~~Ly~~F~~~ 191 (388)
T 2nu8_B 176 QFTKIFMGLATIFLER 191 (388)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999856
No 92
>3oir_A Sulfate transporter sulfate transporter family PR; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG; HET: MSE; 1.85A {Wolinella succinogenes}
Probab=85.35 E-value=1.8 Score=21.55 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=49.3
Q ss_pred CCEEEEEEEEEEEC--CHHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCC-CCCEEE
Q ss_conf 87289999766623--869999999998618998799997588-88888999999999998414-786799
Q gi|254780747|r 35 SPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKN-RKPVIT 101 (293)
Q Consensus 35 ~~~i~~i~i~G~I~--~~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~-~kpvva 101 (293)
.+.|.+++++|++. ..+.+.+.++.. .+..+.|+|++.. +.-+.++...+.+.++.+++ ++.++.
T Consensus 21 ~~gv~v~rl~G~L~F~~a~~~~~~l~~~--~~~~~~vIlD~~~v~~iDssg~~~L~~l~~~~~~~g~~l~l 89 (135)
T 3oir_A 21 PLGVEIYEINGPFFFGVADRLKGVLDVI--EETPKVFILRMRRVPVIDATGMHALWEFQESCEKRGTILLL 89 (135)
T ss_dssp CTTEEEEECCSSBSHHHHHHHTTHHHHC--SSCCSEEEEECTTCSCBCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEEECCEEEHHHHHHHHHHHHHH--CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 9987999962188615199999999973--47999999975079754788999999999999857999999
No 93
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=84.14 E-value=1.9 Score=21.36 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCH-------HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999861899879999758888888-------9999999999984147867996033233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSA-------YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~-------~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
+.+.+..+.|.+. ++- +|.-++|.|+-. .+...+.......+...|.++.+.+.|..|+.|+...+|.++|
T Consensus 130 ~Ki~r~~elA~~~-~lP-~V~l~dSgGarlqeg~~~l~~~~~~~~~~~~~s~~iP~Isvv~Gp~~gG~a~~~a~~d~vIm 207 (548)
T 2bzr_A 130 EKIVKVQELAIKT-GRP-LIGINDGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVIM 207 (548)
T ss_dssp HHHHHHHHHHHHH-TCC-EEEEECCCSCCGGGTTHHHHHHHHHHHHHHHTTTTSCEEEEECSEEESGGGHHHHHSSEEEE
T ss_pred HHHHHHHHHHHHC-CCC-EEEEECCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHCCEEEE
T ss_conf 9999999999971-998-79996157755665400143205899999997589977999627876441322333864899
Q ss_pred -CHHHHHHH
Q ss_conf -30135345
Q gi|254780747|r 124 -AETSLVGS 131 (293)
Q Consensus 124 -~p~s~vGs 131 (293)
.+.+.++.
T Consensus 208 ~~~~a~i~~ 216 (548)
T 2bzr_A 208 VDQTSQMFI 216 (548)
T ss_dssp ETTTCEEES
T ss_pred EECCCEEEE
T ss_conf 714633650
No 94
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.07A {Escherichia coli K12}
Probab=84.00 E-value=2.1 Score=21.17 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=45.4
Q ss_pred CCEEEEEEEEEEECC-----------------------------HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH
Q ss_conf 872899997666238-----------------------------699999999986189987999975888888899999
Q gi|254780747|r 35 SPHVARIAIRGQIED-----------------------------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~-----------------------------~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~ 85 (293)
...|++|.=+|.+.. .-++.+.|+...+|++.+.|++....++-... ..
T Consensus 112 ~G~IgivSqSG~~~~~i~~~~~~~G~G~S~~vs~Gn~~~~~~v~gi~~~d~l~~l~~Dp~T~vIvl~~E~~~~~~~--~~ 189 (480)
T 3dmy_A 112 EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVR--LK 189 (480)
T ss_dssp EEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHH--HH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHH--HH
T ss_conf 9845899647369999999999749986799983897665653686399999997049996089999824886999--99
Q ss_pred HHHHHHHHCCCCCEEEEECCCC
Q ss_conf 9999998414786799603323
Q gi|254780747|r 86 IFRAIQKVKNRKPVITEVHEMA 107 (293)
Q Consensus 86 i~~ai~~~k~~kpvva~~~~~~ 107 (293)
.....+ +.+|||+++..+..
T Consensus 190 ~~~~a~--~~~KPVV~~k~Grs 209 (480)
T 3dmy_A 190 IVNAMK--ATGKPTVALFLGYT 209 (480)
T ss_dssp HHHHHH--HHCSCEEEEETTCC
T ss_pred HHHHHH--CCCCCEEEEEECCC
T ss_conf 999986--18997899984688
No 95
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=83.01 E-value=2.3 Score=20.92 Aligned_cols=68 Identities=7% Similarity=0.104 Sum_probs=48.8
Q ss_pred CEEEEEEEEEEECC--HHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 72899997666238--69999999998618998799997588-8888899999999999841478679960
Q gi|254780747|r 36 PHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEV 103 (293)
Q Consensus 36 ~~i~~i~i~G~I~~--~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~~kpvva~~ 103 (293)
+.+.++.+.|.+.. .+++.+.++++...+..+.+++++.. .--+.++...+....+++++.+..++++
T Consensus 10 ~~~~vi~l~G~l~~~~a~~l~~~l~~~~~~~~~~~vilDls~v~~idssgl~~L~~~~~~~~~~~~~l~l~ 80 (117)
T 1h4x_A 10 RETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTILL 80 (117)
T ss_dssp TTEEEEEEEEEECHHHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 98999999999986899999999999995399968999972687647699999999999998689989999
No 96
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=82.80 E-value=2.3 Score=20.87 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=51.2
Q ss_pred CCEEEEEEEEEEECC--HHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCC-CCCEEE
Q ss_conf 872899997666238--69999999998618998799997588-88888999999999998414-786799
Q gi|254780747|r 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKN-RKPVIT 101 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~--~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~-~kpvva 101 (293)
.+.+.+|.++|.+.. .+++.+.+.++.+++..+.|++++.. ..-+.++...+....+++++ ++++..
T Consensus 11 ~~~~~ii~l~G~l~~~~a~~l~~~l~~~~~~~~~~~vvlD~~~v~~iDssgl~~L~~~~~~~~~~g~~l~l 81 (110)
T 1sbo_A 11 QDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFIL 81 (110)
T ss_dssp CSSEEEEEEESCBSTTTTTHHHHHHHTHHHHCSCSEEEEECTTCCCBCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999999999689899999999998538997899994699873627999999999999978998999
No 97
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=82.78 E-value=2.3 Score=20.87 Aligned_cols=65 Identities=11% Similarity=0.126 Sum_probs=48.6
Q ss_pred CCCEEEEEEEEEEEC--CHHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCCCC-CEEE
Q ss_conf 787289999766623--869999999998618998799997588-8888899999999999841478-6799
Q gi|254780747|r 34 NSPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRK-PVIT 101 (293)
Q Consensus 34 ~~~~i~~i~i~G~I~--~~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~~k-pvva 101 (293)
++..+.+..++|++. ..+.+.+.++ ..+..+.++|+... +.-+.++.+.+.+.++++++.+ .++.
T Consensus 13 ~dg~~~vy~i~G~LfFg~a~~~~~~~~---~~~~~~~vild~~~v~~iD~Sa~~aL~~~~~~~~~~g~~l~l 81 (99)
T 3oiz_A 13 KDGRERIYRVEGQLFYASVEDFMAAFD---FREALDRVVIDVSRAHIWDISSVQALDMAVLKFRREGAEVRI 81 (99)
T ss_dssp TTSSEEEEEEEEEECGGGHHHHHHTCC---TTSCCSEEEEEEEEEEECSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEEECEEEHHHHHHHHHHHH---CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 989999999947884240999999985---337999999984789723779999999999999957999999
No 98
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=82.67 E-value=1.2 Score=22.65 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH----------HHHHHHHHHCC-CCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999----------99999998414-786799603323322321000111
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE----------AIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASN 119 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~----------~i~~ai~~~k~-~kpvva~~~~~~~S~~Y~iAs~ad 119 (293)
+.+.+.++.|.+. ++- +|.-++|.|+...... .+.....++++ +.|+++.+.+.|+.|+-|.+..+|
T Consensus 128 ~K~~r~~e~A~~~-~lP-~V~l~dsgGaRl~e~~~~~~~~~~~g~~~~~~~~~s~~~iP~Isvv~G~~~gG~a~~a~s~~ 205 (588)
T 3gf3_A 128 ENLIRCSDAAKMM-HLP-LIYLLNCSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYHSISPT 205 (588)
T ss_dssp HHHHHHHHHHHHH-TCC-EEEEECCCCBCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHHHHSSS
T ss_pred HHHHHHHHHHHHH-CCC-EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCC
T ss_conf 9999999999985-989-79994478766665422353044443899999998569997799945776666530120465
Q ss_pred CCCCCHHHHHHHHH
Q ss_conf 00013013534555
Q gi|254780747|r 120 IIVAAETSLVGSIG 133 (293)
Q Consensus 120 ~I~a~p~s~vGsiG 133 (293)
-|++.+.+.++.-|
T Consensus 206 ~ii~~~~a~i~l~G 219 (588)
T 3gf3_A 206 ILIAHQDANMAVGG 219 (588)
T ss_dssp EEEEETTCEEESSC
T ss_pred CCEEECCEEEEECC
T ss_conf 32352434799728
No 99
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=82.47 E-value=2.2 Score=21.03 Aligned_cols=137 Identities=9% Similarity=0.065 Sum_probs=59.3
Q ss_pred ECCHHHHHHHHHHHHCCCCCCEEEEEC--CCC------------CC-----CHHHHHHHHHHHHHH-----C---CCCCE
Q ss_conf 238699999999986189987999975--888------------88-----889999999999984-----1---47867
Q gi|254780747|r 47 IEDSQELIERIERISRDDSATALIVSL--SSP------------GG-----SAYAGEAIFRAIQKV-----K---NRKPV 99 (293)
Q Consensus 47 I~~~~~l~~~l~~a~~d~~ik~ivL~i--~Sp------------GG-----~~~~~~~i~~ai~~~-----k---~~kpv 99 (293)
+.+.+++.+..++.... .+|+.- ... || ++..+.+.++.+... + .++|+
T Consensus 25 ~~~~~e~~~~~~~l~~~----~~VvKaQv~aGgRGKa~~~~~~~GGVk~~~s~~ea~~~a~~~lg~~l~t~qt~~~G~~v 100 (395)
T 2fp4_B 25 ADTANEALEAAKRLNAK----EIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKV 100 (395)
T ss_dssp ESSHHHHHHHHHHHTCS----SEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHHTTTTSEEECTTSCTTCEEC
T ss_pred ECCHHHHHHHHHHCCCC----CEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 28999999999970999----68999042258775466777888848995999999999999745224324357788242
Q ss_pred -EEEECC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCC--------CC
Q ss_conf -996033-23322321000111000130135345556530210245677742042255315521123466--------67
Q gi|254780747|r 100 -ITEVHE-MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--------SE 169 (293)
Q Consensus 100 -va~~~~-~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~--------~~ 169 (293)
.++++. ....--||++..-|+-.-.|.=+...- ...+..+.-++.--....+..-+.... .++ -.
T Consensus 101 ~~vlvee~~~i~~E~Ylsi~iDr~~~~~~ii~S~e----GGvdIEeva~~~p~~I~~~~i~p~~g~-~~~~~~~~~~~lg 175 (395)
T 2fp4_B 101 NKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQ----GGVDIEEVAASNPELIFKEQIDIIEGI-KDSQAQRMAENLG 175 (395)
T ss_dssp CCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESS----CSSCHHHHHHHCGGGCEEEECCTTTCC-CHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECC----CCCCHHHHHHHCCCCEEEEEECCCCCC-CCHHHHHHHHHCC
T ss_conf 45999966665410799999626888569998078----898655656644121224662144455-5368999999749
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999887777766666778999
Q gi|254780747|r 170 VNPKAVQMMQDVVDSSYHWFVRL 192 (293)
Q Consensus 170 ~s~e~~~~~~~~l~~~~~~f~~~ 192 (293)
++.+..+.+..++..+|+.|.+.
T Consensus 176 l~~~~~~~~~~ii~~Ly~~F~e~ 198 (395)
T 2fp4_B 176 FLGPLQNQAADQIKKLYNLFLKI 198 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96677788999999999999856
No 100
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=81.88 E-value=2.5 Score=20.66 Aligned_cols=68 Identities=6% Similarity=0.075 Sum_probs=50.9
Q ss_pred CCEEEEEEEEEEEC--CHHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 87289999766623--869999999998618998799997588-888889999999999984147867996
Q gi|254780747|r 35 SPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITE 102 (293)
Q Consensus 35 ~~~i~~i~i~G~I~--~~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~~kpvva~ 102 (293)
.+.++++.++|.+. ....+.+.+.....+...+.|+|++.. +--+.++...+....+++++.+--+++
T Consensus 19 ~d~v~vl~~~g~Ld~~~a~~f~~~l~~~~~~~~~~~vilDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l 89 (125)
T 2ka5_A 19 VDDVVILMPNKELNIENAHLFKKWVFDEFLNKGYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFAL 89 (125)
T ss_dssp CSSCEEECCCSCCSGGGTHHHHHHHHHHTTTTTCCEEEEECTTCSCCCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred ECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999741886889999999999999966998899984799727768999999999999977999999
No 101
>1j7x_A IRBP, interphotoreceptor retinoid-binding protein; beta BETA alpha spiral, transport protein; 1.80A {Xenopus laevis} SCOP: c.14.1.2
Probab=81.33 E-value=1 Score=23.11 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=32.1
Q ss_pred CCEEEEEEEEEEECCH--HHHHHHHHHHH--CCCCCCEEEEEC-CCCCCCHHHHHHHHHHH
Q ss_conf 8728999976662386--99999999986--189987999975-88888889999999999
Q gi|254780747|r 35 SPHVARIAIRGQIEDS--QELIERIERIS--RDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~~--~~l~~~l~~a~--~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai 90 (293)
+++|..|+++.-.... .++.+.+.... +-.+++++||++ +.+||....+..+...+
T Consensus 105 ~gnIGYlri~~F~~~~~~~~~~~~~~~~~~~~~~~~~~LIIDLR~N~GG~~~~~~~l~s~f 165 (302)
T 1j7x_A 105 PGNIGYLRFDQFADVSVIAKLAPFIVNTVWEPITITENLIIDLRYNVGGSSTAVPLLLSYF 165 (302)
T ss_dssp TTTEEEEECCCBCCHHHHHHHHHHHHHHTHHHHTTCSEEEEECTTCCCBCSTTHHHHHHTT
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 5967499965347853358999999998765216984599981738897899999999975
No 102
>2vy9_A Anti-sigma-factor antagonist; gene regulation, RSBS, stressosome, STAS domain, bacillus subtilis; 2.3A {Moorella thermoacetica}
Probab=78.17 E-value=3.3 Score=19.90 Aligned_cols=65 Identities=11% Similarity=0.166 Sum_probs=50.2
Q ss_pred CEEEEEEEEEEECCH--HHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCC-CCCEE
Q ss_conf 728999976662386--9999999998618998799997588-88888999999999998414-78679
Q gi|254780747|r 36 PHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKN-RKPVI 100 (293)
Q Consensus 36 ~~i~~i~i~G~I~~~--~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~-~kpvv 100 (293)
+.++++.+.|.+... +++.+.+.....+.+.+.+++++.. +--+.++...+.+..+.++. +++++
T Consensus 11 ~~~lvv~l~G~Ld~~~~~~l~~~ll~~i~~~~~~~vilD~s~v~~idssgl~~l~~~~~~~~~~g~~~~ 79 (123)
T 2vy9_A 11 DDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFV 79 (123)
T ss_dssp TTEEEEECCCCSCSHHHHHHHHHHHHHHTTSCCSEEEEECTTCSSCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 999999856898789999999999999984799799998569974519999999999999997699899
No 103
>3mgl_A Sulfate permease family protein; PSI2, MCSG, structural genomics, protein structure initiative; 2.25A {Vibrio cholerae o1 biovar el tor}
Probab=73.36 E-value=4.4 Score=19.11 Aligned_cols=64 Identities=19% Similarity=0.196 Sum_probs=48.5
Q ss_pred CEEEEEEEEEEEC--CHHHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHHHHHHHHHHHCCC-CCEEE
Q ss_conf 7289999766623--869999999998618998799997588-888889999999999984147-86799
Q gi|254780747|r 36 PHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVIT 101 (293)
Q Consensus 36 ~~i~~i~i~G~I~--~~~~l~~~l~~a~~d~~ik~ivL~i~S-pGG~~~~~~~i~~ai~~~k~~-kpvva 101 (293)
+.|.++.++|++. ..+.+.+.+++..+ ..+.|+|++.. .--+.++...+.+.++++++. ..++.
T Consensus 19 ~~v~i~~~~G~L~F~~a~~~~~~l~~~~~--~~~~vIlD~~~v~~iD~sg~~~l~~~~~~~~~~g~~l~l 86 (130)
T 3mgl_A 19 RELAVYALEGPFFFAAAETFERVMGSIQE--TPQILILRLKWVPFMDITGIQTLEEMIQSFHKRGIKVLI 86 (130)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHHHHHSSS--CCSEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCEEEHHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 98899997569854659999999997247--999999977379876868999999999999977998999
No 104
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=69.84 E-value=5.3 Score=18.61 Aligned_cols=55 Identities=20% Similarity=0.220 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEECCCC
Q ss_conf 869999999998618998799997588888889999999999984-14786799603323
Q gi|254780747|r 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMA 107 (293)
Q Consensus 49 ~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~-k~~kpvva~~~~~~ 107 (293)
+.+.+++-|++|+.||+|.+|=.-+-=.++.. .|.++|-+. +++|.|.+.++=-|
T Consensus 348 SF~~vv~fl~~AA~DP~V~aIK~TLYR~~~~S----~Iv~aLi~AAenGK~VtvlVELkA 403 (687)
T 1xdp_A 348 TFEHVLELLRQASFDPSVLAIKINIYRVAKDS----RIIDSMIHAAHNGKKVTVVVELQA 403 (687)
T ss_dssp CTHHHHHHHHHHHHCTTEEEEEEEESSCCTTC----HHHHHHHHHHHTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC----HHHHHHHHHHHCCCEEEEEEEEHH
T ss_conf 42378999999856998589866787447898----589999999973988999999721
No 105
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=68.73 E-value=5.5 Score=18.46 Aligned_cols=50 Identities=10% Similarity=0.137 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEEC
Q ss_conf 9999999998618998799997588888889999999999984-14786799603
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVH 104 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~-k~~kpvva~~~ 104 (293)
+.+++-|++|+.||+|.+|=.-+-=.++.. .|.++|-+. +++|.|.+.++
T Consensus 355 ~~vv~fl~eAA~DP~V~aIK~TLYR~a~~S----~Iv~aLi~AAenGK~VtvlVE 405 (705)
T 2o8r_A 355 DYVVRLLMEAAISPDVSEIRLTQYRVAENS----SIISALEAAAQSGKKVSVFVE 405 (705)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEEESCCCSCC----HHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEEECCCCC----HHHHHHHHHHHCCCEEEEEEE
T ss_conf 157999999857998179865787437888----389999999975988999996
No 106
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=68.37 E-value=5.6 Score=18.42 Aligned_cols=63 Identities=19% Similarity=0.403 Sum_probs=40.6
Q ss_pred EEEEEEEEEEECCHHHHHHHHHHHH----------CCCCCCEEEEECCCCCCCHHHH-HHH-----HHHHHHH-CCCCCE
Q ss_conf 2899997666238699999999986----------1899879999758888888999-999-----9999984-147867
Q gi|254780747|r 37 HVARIAIRGQIEDSQELIERIERIS----------RDDSATALIVSLSSPGGSAYAG-EAI-----FRAIQKV-KNRKPV 99 (293)
Q Consensus 37 ~i~~i~i~G~I~~~~~l~~~l~~a~----------~d~~ik~ivL~i~SpGG~~~~~-~~i-----~~ai~~~-k~~kpv 99 (293)
+|+||++.|. .++++++|+++. +=+++++||| |||....+ ..+ .++|+++ +.+||+
T Consensus 22 kIgVi~~~Gn---~~s~~~aL~~lG~~~~iv~~~~~l~~~D~lIL----PGG~~~~~~~~l~~~~~~~~i~~~~~~~kPi 94 (208)
T 2iss_D 22 KIGVLGVQGD---VREHVEALHKLGVETLIVKLPEQLDMVDGLIL----PGGESTTMIRILKEMDMDEKLVERINNGLPV 94 (208)
T ss_dssp EEEEECSSSC---HHHHHHHHHHTTCEEEEECSGGGGGGCSEEEE----CSSCHHHHHHHHHHTTCHHHHHHHHHTTCCE
T ss_pred EEEEEECCCC---HHHHHHHHHHCCCCEEEECCHHHHHCCCEEEE----CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCE
T ss_conf 8999956887---99999999988998999899899825999999----9999899999999869889999999869988
Q ss_pred EEEECCC
Q ss_conf 9960332
Q gi|254780747|r 100 ITEVHEM 106 (293)
Q Consensus 100 va~~~~~ 106 (293)
.--|.++
T Consensus 95 LGIClG~ 101 (208)
T 2iss_D 95 FATCAGV 101 (208)
T ss_dssp EEETHHH
T ss_pred EEECCCH
T ss_conf 9987241
No 107
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=67.72 E-value=5.8 Score=18.34 Aligned_cols=69 Identities=20% Similarity=0.362 Sum_probs=48.9
Q ss_pred EECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62386999999999861899879999758888888999999999998414-78679960332332232100011100013
Q gi|254780747|r 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAA 124 (293)
Q Consensus 46 ~I~~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~-~kpvva~~~~~~~S~~Y~iAs~ad~I~a~ 124 (293)
++++.+++.+++++..+-++++.++|-=.-.||. |.++++++|+ +-||++. +++.| +-.++|=++..
T Consensus 126 p~~Ge~~l~eAv~av~rl~r~~~lvlags~mgg~------i~~~v~~~~~~~~~vi~l--~m~gs----~~~~~dlvv~d 193 (223)
T 1y7p_A 126 PVVGEEEIAEAVKAVSRLHRAEVLVLAGGIMGGK------ITEEVKKLRKSGIRVISL--SMFGS----VPDVADVVISD 193 (223)
T ss_dssp ECCSHHHHHHHHHHGGGSTTEEEEEEESSBCCTH------HHHHHHHHGGGTCEEEEE--SCBSS----HHHHSSEEESS
T ss_pred EECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCH------HHHHHHHHHHCCCEEEEE--CCCCC----CCCCCCEEECC
T ss_conf 5067789999999861356776699806531655------899999999869859996--37888----65400167558
Q ss_pred HH
Q ss_conf 01
Q gi|254780747|r 125 ET 126 (293)
Q Consensus 125 p~ 126 (293)
|-
T Consensus 194 p~ 195 (223)
T 1y7p_A 194 PV 195 (223)
T ss_dssp HH
T ss_pred CH
T ss_conf 34
No 108
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=65.59 E-value=2.4 Score=20.71 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=16.8
Q ss_pred CCCCEEEEECCCCCC--CHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 998799997588888--889999999999984147867996
Q gi|254780747|r 64 DSATALIVSLSSPGG--SAYAGEAIFRAIQKVKNRKPVITE 102 (293)
Q Consensus 64 ~~ik~ivL~i~SpGG--~~~~~~~i~~ai~~~k~~kpvva~ 102 (293)
..+.+|-... .||- +.......++.+... -++|++..
T Consensus 72 ~~id~ia~t~-gPGl~~~l~vG~~~Ak~la~~-~~~Pli~v 110 (334)
T 3eno_A 72 HDIDLIGFSM-GPGLAPSLRVTATAARTISVL-TGKPIIGV 110 (334)
T ss_dssp GGCCEEEEEC-SSSCHHHHHHHHHHHHHHHHH-HTCCCEEE
T ss_pred HHCCEEEECC-CCCCCCCCCHHHHHHHHHHHH-CCCCCCCC
T ss_conf 3302688435-787322420679999998874-26784523
No 109
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=64.31 E-value=5.7 Score=18.41 Aligned_cols=67 Identities=22% Similarity=0.332 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCCCCCC----CCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999999999984147867996-033233223----210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAG----YLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~-~~~~~~S~~----Y~iAs~ad~I~a 123 (293)
-++++.|.++.+ +...|+++. |||-...+-.|+++|..+ +.|++-. +.+..+-.. -+++-.|+..++
T Consensus 53 gelid~I~~a~~-~~~dgiIiN---Pga~ThtS~al~DAl~~~--~~P~iEVHlSNi~~RE~fR~~S~is~~~~g~I~ 124 (149)
T 2uyg_A 53 GQLIEWVQQAHQ-EGFLAIVLN---PGALTHYSYALLDAIRAQ--PLPVVEVHLTNLHAREEFRRHSVTAPACRGIVS 124 (149)
T ss_dssp HHHHHHHHHTTT-TTCSEEEEE---CGGGGGTCHHHHHHHHTS--CSCEEEEESSCGGGSCGGGGCCSSGGGSSEEEE
T ss_pred HHHHHHHHHHCC-CCCEEEEEC---CCHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 889999998322-562179975---522320101499999835--999899980586445655665655763369994
No 110
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=62.79 E-value=7.2 Score=17.75 Aligned_cols=63 Identities=17% Similarity=0.432 Sum_probs=42.5
Q ss_pred EEEEEEEEEEECCHHHHHHHHHHHHCC----------CCCCEEEEECCCCCCCHHHHH-HH-----HHHHHHH-CCCCCE
Q ss_conf 289999766623869999999998618----------998799997588888889999-99-----9999984-147867
Q gi|254780747|r 37 HVARIAIRGQIEDSQELIERIERISRD----------DSATALIVSLSSPGGSAYAGE-AI-----FRAIQKV-KNRKPV 99 (293)
Q Consensus 37 ~i~~i~i~G~I~~~~~l~~~l~~a~~d----------~~ik~ivL~i~SpGG~~~~~~-~i-----~~ai~~~-k~~kpv 99 (293)
+|++|++.|. .++++++|+++..+ ++..+||| |||....+. .+ .+.|+++ ++++|+
T Consensus 25 kigvl~~~Gn---~~s~~~AL~~lG~~~~iv~~~~~l~~~D~lIL----PGG~~~~~~~~l~~~~l~~~I~~~~~~gkPi 97 (219)
T 1q7r_A 25 KIGVLGLQGA---VREHVRAIEACGAEAVIVKKSEQLEGLDGLVL----PGGESTTMRRLIDRYGLMEPLKQFAAAGKPM 97 (219)
T ss_dssp EEEEESCGGG---CHHHHHHHHHTTCEEEEECSGGGGTTCSEEEE----CCCCHHHHHHHHHHTTCHHHHHHHHHTTCCE
T ss_pred EEEEEECCCC---HHHHHHHHHHCCCCEEEECCHHHHHCCCEEEE----CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCE
T ss_conf 7999965883---99999999987996999899899824999999----9998799999865787389999999779979
Q ss_pred EEEECCC
Q ss_conf 9960332
Q gi|254780747|r 100 ITEVHEM 106 (293)
Q Consensus 100 va~~~~~ 106 (293)
.--|.++
T Consensus 98 LGIClGm 104 (219)
T 1q7r_A 98 FGTCAGL 104 (219)
T ss_dssp EEETTHH
T ss_pred EEECCCH
T ss_conf 9994006
No 111
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=59.94 E-value=8.1 Score=17.43 Aligned_cols=66 Identities=18% Similarity=0.317 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE-EECCCCCCCC----CCCCCCCCCCCC
Q ss_conf 999999999861899879999758888888999999999998414786799-6033233223----210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAG----YLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva-~~~~~~~S~~----Y~iAs~ad~I~a 123 (293)
-++++.|.++.++ ..||++. |||-...+-.|+++|..+ +.|++- .+.+..+-.. -+++..|...++
T Consensus 82 gelId~Iq~~~~~--~dgIIIN---Pga~ThtS~Al~DAl~~~--~~P~IEVHlSNi~~RE~fR~~S~is~~a~g~I~ 152 (172)
T 3n8k_A 82 AQLLDWIHQAADA--AEPVILN---AGGLTHTSVALRDACAEL--SAPLIEVHISNVHAREEFRRHSYLSPIATGVIV 152 (172)
T ss_dssp HHHHHHHHHHHHH--TCCEEEE---CGGGGGTCHHHHHHHTTC--CSCEEEEESSCTTSSCGGGGCCSSGGGSSEEEE
T ss_pred HHHHHHHHHHCCC--CCEEEEC---CCHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 9999999985026--7637963---503423449999999835--998899983375345654544434621408994
No 112
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=57.30 E-value=9 Score=17.15 Aligned_cols=78 Identities=22% Similarity=0.224 Sum_probs=44.3
Q ss_pred CCEEEEEEEEEEECC-HHHHHHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHH-------C-----------
Q ss_conf 872899997666238-699999999986189987999975-88888889999999999984-------1-----------
Q gi|254780747|r 35 SPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKV-------K----------- 94 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~-~~~l~~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~-------k----------- 94 (293)
.+.|+.|+|...-.+ .+++.+.+ .+..+++++||++ +.+||.+.. .|.+.+.+- +
T Consensus 850 ~~~igYi~i~~~~~~~~~~~~~~~---~~~~~~~~lIiDlR~N~GG~~~~--~~~~~l~~~~~~~~~~r~~~~~~~~~~~ 924 (1045)
T 1k32_A 850 KGTIGYIHIPDMGMMGLNEFYRLF---INESSYQGLIVDVRFNGGGFVSQ--LIIEKLMNKRIGYDNPRRGTLSPYPTNS 924 (1045)
T ss_dssp TTSEEEEECCCBSHHHHHHHHHHH---HHHTTSSEEEEECTTCCCBSCHH--HHHHHHTCBCCEEEEESSSCCEEESTTC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHH---HHHCCCCEEEEECCCCCCCCHHH--HHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 980999996877962399999999---86479987999927699813999--9998707875799956788315684535
Q ss_pred CCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 47867996033233223210001
Q gi|254780747|r 95 NRKPVITEVHEMAASAGYLISCA 117 (293)
Q Consensus 95 ~~kpvva~~~~~~~S~~Y~iAs~ 117 (293)
-.+|+++.++..++|++=.+|.+
T Consensus 925 ~~gp~vvLv~~~t~S~aE~~~~~ 947 (1045)
T 1k32_A 925 VRGKIIAITNEYAGSDGDIFSFS 947 (1045)
T ss_dssp BCSEEEEEECTTCCTHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHH
T ss_conf 78999999899982899999999
No 113
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A
Probab=56.66 E-value=9.2 Score=17.08 Aligned_cols=66 Identities=18% Similarity=0.306 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCCCCCC----CCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999999999984147867996-033233223----210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAG----YLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~-~~~~~~S~~----Y~iAs~ad~I~a 123 (293)
-++++.|.++.++ ..||++. |||-...+..|+++|..+ +.|++-. +.+..+-.. -+++..|...++
T Consensus 56 geli~~Iq~~~~~--~~giIiN---pga~Th~S~al~Dal~~~--~~P~iEVHlSNi~~RE~fR~~S~is~~~~g~i~ 126 (146)
T 1h05_A 56 AQLLDWIHQAADA--AEPVILN---AGGLTHTSVALRDACAEL--SAPLIEVHISNVHAREEFRRHSYLSPIATGVIV 126 (146)
T ss_dssp HHHHHHHHHHHHH--TCCEEEE---CGGGGGTCHHHHHHHHTC--CSCEEEEESSCGGGSCGGGGCCSSGGGSSEEEE
T ss_pred HHHHHHHHHHCCC--CCEEEEC---CCHHEEEHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 9999999984346--8617963---511212025189999864--998899984586545666644424731439994
No 114
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=56.36 E-value=2.9 Score=20.20 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHC-----CCCCCEEEEECCCCC--CCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 999999999861-----899879999758888--88899999999999841478679960
Q gi|254780747|r 51 QELIERIERISR-----DDSATALIVSLSSPG--GSAYAGEAIFRAIQKVKNRKPVITEV 103 (293)
Q Consensus 51 ~~l~~~l~~a~~-----d~~ik~ivL~i~SpG--G~~~~~~~i~~ai~~~k~~kpvva~~ 103 (293)
+.+...++++-+ -+.+.+|-+-.. || ++.......++.+.. .-++|++..-
T Consensus 49 ~~l~~~i~~~l~~a~i~~~~id~iavt~g-PG~~~~L~vG~~~Ak~la~-~~~~P~i~v~ 106 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQG-PGLGPALRVVATAARALAV-KYRKPIVGVN 106 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEE-SSCHHHHHHHHHHHHHHHH-HTTCCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCHHHHHHHHHHHHH-HCCCCEEEEC
T ss_conf 99999999999984998556866888128-9841026999999999998-6087637626
No 115
>3c3w_A Two component transcriptional regulatory protein DEVR; response regulator, two-component regulatory system, DNA- binding protein; 2.20A {Mycobacterium tuberculosis}
Probab=53.94 E-value=10 Score=16.81 Aligned_cols=167 Identities=10% Similarity=0.128 Sum_probs=80.1
Q ss_pred EEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC---CCCCCC
Q ss_conf 66623869999999998618998799997588888889999999999984147867996033233223210---001110
Q gi|254780747|r 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI---SCASNI 120 (293)
Q Consensus 44 ~G~I~~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~i---As~ad~ 120 (293)
-+.-.+..+.++.++.. ...-++++++-||.+. .++...++......|++++.... +..+.. .+.++-
T Consensus 30 v~~a~~~~eal~~~~~~----~pdlvl~d~~l~~~~g---~~~~~~l~~~~~~~~vi~~t~~~--~~~~~~~al~~Ga~~ 100 (225)
T 3c3w_A 30 VGEAGSVAEAMARVPAA----RPDVAVLDVRLPDGNG---IELCRDLLSRMPDLRCLILTSYT--SDEAMLDAILAGASG 100 (225)
T ss_dssp EEEESSHHHHHHHHHHH----CCSEEEECSEETTEEH---HHHHHHHHHHCTTCEEEEGGGSS--SHHHHHHHHHHTCCC
T ss_pred EEEECCHHHHHHHHHHC----CCCEEEEECCCCCCCC---HHHHHHHHCCCCCCCEEEEECCC--CHHHHHHHHHCCCCE
T ss_conf 99979999999999865----9989998277899861---58988753028998578631566--578999999849887
Q ss_pred CCCCHHH---HHHHHHHHHC-CCH-----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0013013---5345556530-210-----245677742042255315521123466678999988777776666677899
Q gi|254780747|r 121 IVAAETS---LVGSIGVLFQ-YPY-----VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 (293)
Q Consensus 121 I~a~p~s---~vGsiGv~~~-~~~-----~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~ 191 (293)
.+..+.+ +...+-.+.. ... ...+..+..-. ....+++..+|+.+++.++-+.+..- ..
T Consensus 101 ~l~K~~~~~~l~~~i~~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~LT~RE~eVL~ll~~G~s---nk 168 (225)
T 3c3w_A 101 YVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLRGA---------AEKQDPLSGLTDQERTLLGLLSEGLT---NK 168 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHH---------HHHSCTTTTSCHHHHHHHHHHHTTCC---HH
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC---------CCCCCCCCCCCHHHHHHHHHHHHCCC---HH
T ss_conf 7406777999999999998699768978999999886402---------33367556799999999999993898---88
Q ss_pred HHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99851499988998873498237889987798062389899999999741
Q gi|254780747|r 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 192 ~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
.||+..+++...++.... ++| .++|+- +.-+++.++.+.+
T Consensus 169 eIA~~L~iS~~TVk~h~~-~I~-----~KLgv~----nr~eav~~A~~~g 208 (225)
T 3c3w_A 169 QIADRMFLAEKTVKNYVS-RLL-----AKLGME----RRTQAAVFATELK 208 (225)
T ss_dssp HHHHHHTCCHHHHHHHHH-HHH-----HHTTCC----SSCHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHH-HHH-----HHHCCC----CHHHHHHHHHHCC
T ss_conf 999997887999999999-999-----996899----9999999999829
No 116
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A
Probab=52.67 E-value=11 Score=16.68 Aligned_cols=64 Identities=20% Similarity=0.339 Sum_probs=37.6
Q ss_pred EEEEEEEEEEECCHHHHHHHHHHHH--------------CCCCCCEEEEECCCCC-CC-HHHHHHH-----HHHHHHH-C
Q ss_conf 2899997666238699999999986--------------1899879999758888-88-8999999-----9999984-1
Q gi|254780747|r 37 HVARIAIRGQIEDSQELIERIERIS--------------RDDSATALIVSLSSPG-GS-AYAGEAI-----FRAIQKV-K 94 (293)
Q Consensus 37 ~i~~i~i~G~I~~~~~l~~~l~~a~--------------~d~~ik~ivL~i~SpG-G~-~~~~~~i-----~~ai~~~-k 94 (293)
+|++||... .....+.++|+++. +++...+|+| || |+ ......| .+.|+++ +
T Consensus 2 kI~IiDyg~--gN~~si~~~l~~~g~~~~~~~~~~~~~~~~~~~D~iIl----PG~G~~~~~~~~l~~~~l~~~I~~~~~ 75 (201)
T 1gpw_B 2 RIGIISVGP--GNIMNLYRGVKRASENFEDVSIELVESPRNDLYDLLFI----PGVGHFGEGMRRLRENDLIDFVRKHVE 75 (201)
T ss_dssp EEEEECCSS--SCCHHHHHHHHHHSTTBSSCEEEEECSCCSSCCSEEEE----CCCSCSHHHHHHHHHTTCHHHHHHHHH
T ss_pred EEEEEECCC--CHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCEEEE----CCCCCHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 899991798--58999999999856204532369707746602897999----898758999999656587889999997
Q ss_pred CCCCEEEEECCC
Q ss_conf 478679960332
Q gi|254780747|r 95 NRKPVITEVHEM 106 (293)
Q Consensus 95 ~~kpvva~~~~~ 106 (293)
.++|+.--|.++
T Consensus 76 ~~~PiLGIClG~ 87 (201)
T 1gpw_B 76 DERYVVGVCLGM 87 (201)
T ss_dssp TTCEEEEETHHH
T ss_pred CCCCEEEEEEEE
T ss_conf 699889998617
No 117
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=52.19 E-value=11 Score=16.63 Aligned_cols=26 Identities=15% Similarity=0.289 Sum_probs=9.7
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99975888888899999999999841
Q gi|254780747|r 69 LIVSLSSPGGSAYAGEAIFRAIQKVK 94 (293)
Q Consensus 69 ivL~i~SpGG~~~~~~~i~~ai~~~k 94 (293)
++|+=-+-|-++...++|++.|++++
T Consensus 175 lllDEPt~gLD~~~~~~i~~~l~~l~ 200 (257)
T 1g6h_A 175 IVMDEPIAGVAPGLAHDIFNHVLELK 200 (257)
T ss_dssp EEEESTTTTCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 56248766799999999999999999
No 118
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=50.73 E-value=11 Score=16.49 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=9.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 4666789999887777766666
Q gi|254780747|r 165 SPFSEVNPKAVQMMQDVVDSSY 186 (293)
Q Consensus 165 ~p~~~~s~e~~~~~~~~l~~~~ 186 (293)
||+..+.+..+..+..++.++.
T Consensus 169 EPtagLD~~~~~~i~~~l~~l~ 190 (275)
T 3gfo_A 169 EPTAGLDPMGVSEIMKLLVEMQ 190 (275)
T ss_dssp CTTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8755589999999999999999
No 119
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=49.05 E-value=12 Score=16.32 Aligned_cols=67 Identities=22% Similarity=0.321 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCCCCC----CCCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999999999984147867996-03323322----32100011100013
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASA----GYLISCASNIIVAA 124 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~-~~~~~~S~----~Y~iAs~ad~I~a~ 124 (293)
-++++.|.++.+ +..|+++. |||-...+-.|+++|..+ +.|++-. +.+..+-. --+++..|+..++-
T Consensus 55 gelId~I~~~~~--~~dgiIiN---pga~ThtS~al~DAl~~~--~~P~iEVHlSNi~~RE~fR~~S~is~~~~g~i~G 126 (154)
T 1uqr_A 55 ESLINRIHQAFQ--NTDFIIIN---PGAFTHTSVAIRDALLAV--SIPFIEVHLSNVHAREPFRHHSYLSDVAKGVICG 126 (154)
T ss_dssp HHHHHHHHHTTT--TCCEEEEE---CTTHHHHCHHHHHHHHHH--TCCEEEEESSCGGGSCGGGSCCSSGGGSSEEEES
T ss_pred HHHHHHHHHHHC--CCCEEEEC---CCCCEEEHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 999999999753--67789972---763031037899999854--9988999825842246545455456102189953
No 120
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2c4v_A* 1j2y_A* 2wks_A* 2xb9_A*
Probab=48.25 E-value=12 Score=16.25 Aligned_cols=67 Identities=24% Similarity=0.339 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCCCCC----CCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999999999984147867996-03323322----3210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASA----GYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~-~~~~~~S~----~Y~iAs~ad~I~a 123 (293)
-++++.|.++.+ .+..||++. ||+-...+-.|+++|..+ +.|++-. +.+..+-- .-+++-.|...++
T Consensus 65 gelId~Iq~a~~-~~~dgiIiN---Pga~ThtS~al~DAL~~~--~~P~IEVHlSNi~~RE~fR~~S~is~~~~g~I~ 136 (176)
T 2c4w_A 65 GEIIDKIQESVG-SEYEGIIIN---PGAFSHTSIAIADAIMLA--GKPVIEVHLTNIQAREEFRKNSYTGAACGGVIM 136 (176)
T ss_dssp HHHHHHHHHHHS-SSCCEEEEE---CGGGGGTCHHHHHHHHTS--SSCEEEEESSCGGGSCGGGTCCHHHHHSSEEEE
T ss_pred HHHHHHHHHHHC-CCCCEEEEC---CCCCEEHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 999999999627-893289975---763133006799999825--998899982587656656654435740338992
No 121
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C*
Probab=47.82 E-value=13 Score=16.20 Aligned_cols=21 Identities=5% Similarity=0.321 Sum_probs=9.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 346667899998877777666
Q gi|254780747|r 164 PSPFSEVNPKAVQMMQDVVDS 184 (293)
Q Consensus 164 ~~p~~~~s~e~~~~~~~~l~~ 184 (293)
-||+..+.+..++.+..++..
T Consensus 158 DEPtsgLD~~~~~~i~~~i~~ 178 (249)
T 2qi9_C 158 DEPMNSLDVAQQSALDKILSA 178 (249)
T ss_dssp SSTTTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHH
T ss_conf 588777999999999999999
No 122
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=46.00 E-value=14 Score=16.03 Aligned_cols=126 Identities=14% Similarity=0.097 Sum_probs=57.2
Q ss_pred HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 99841478679960332332232100011100013013534555653021024567774204225531552112346667
Q gi|254780747|r 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 (293)
Q Consensus 90 i~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~ 169 (293)
..+.|.+++-++|.++.-..-=--...+.++=++.|- ++| ..--.+..++++|+....+. ..+|.+
T Consensus 17 ~~~~~~~~krIvfaeg~d~rvL~Aa~~~~~~gi~~PI-LvG------~~~~I~~~~~~~gl~~~~~e------IId~~~- 82 (337)
T 1r5j_A 17 REKILGKNMKIVFPEGNDERVVRAAARLKFEGLLEPI-ILG------QSEEVRNLLTKLGFADQDYT------IINPNE- 82 (337)
T ss_dssp HHHHTTSCCEEEESCSSCHHHHHHHHHHHTTTSCEEE-EBS------CHHHHHHHHHHTTCCCSSCC------CBCSSS-
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EEC------CHHHHHHHHHHCCCCCCCCE------EECCCC-
T ss_conf 9998518998998087998999999999986996899-977------99999999997798966755------778897-
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCC-----CCHHHHHHHHHHH
Q ss_conf 8999988777776666677899998514999889988734982378899877980623-----8989999999974
Q gi|254780747|r 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV-----GGQEEVWQSLYAL 240 (293)
Q Consensus 170 ~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~i-----g~~~~a~~~l~~~ 240 (293)
+++++ .. .+.|.+ .. .++.+.+..+.+.....+.|-..+..|.+|.+ .+..+.++.+...
T Consensus 83 --~~~~~---~~----~~~~~~-~r-~~~~~~~~a~~~~~d~~~~a~~mv~~G~aD~lv~G~~~~t~~~l~~~l~~ 147 (337)
T 1r5j_A 83 --YADFD---KM----KEAFVE-VR-KGKATLEDADKMLRDVNYFGVMLVKMGLADGMVSGAIHSTADTVRPALQI 147 (337)
T ss_dssp --CTTHH---HH----HHHHHH-HH-TTTCCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCSHHHHHHHHHS
T ss_pred --HHHHH---HH----HHHHHH-HH-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHH
T ss_conf --68899---99----999999-97-26886999999866468999999967998656515555738888778987
No 123
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=46.00 E-value=7.7 Score=17.56 Aligned_cols=68 Identities=16% Similarity=0.188 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999986189987999975888888899999999999841478679960--33233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV--HEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~--~~~~~S~~Y~iAs~ad~I~a 123 (293)
+.+.+.+++|.+.-+++.+++- |+|++-..|++.+.++.++..+-.++ ..+|+.-|-+||.++=+.|-
T Consensus 234 ~~L~~~~~~a~~~~~~~~lvvs-----GGVaaN~~LR~~l~~~~~~~~~~~~~p~~~~ctDNaaMIA~~g~~~~~ 303 (540)
T 3en9_A 234 SMLTEITERALAHTNKGEVMLV-----GGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHK 303 (540)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-----SGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEE-----CCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999997092979998-----549998999999999998769999878878714889999999999997
No 124
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=45.67 E-value=14 Score=16.00 Aligned_cols=67 Identities=15% Similarity=0.239 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEE-EEECCCCCCCC----CCCCCCCCCCCC
Q ss_conf 99999999986189987999975888888899999999999841478679-96033233223----210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI-TEVHEMAASAG----YLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvv-a~~~~~~~S~~----Y~iAs~ad~I~a 123 (293)
-++++.|.++.++ ...+|++. ||+-...+-.|+++|..+ +.|++ +.+.+..+-.. -+++..|...++
T Consensus 70 gelId~Iq~~~~~-~~~gIIiN---pga~THtSiai~DAL~~~--~~P~iEVHlSNi~~RE~fR~~Svis~~~~g~I~ 141 (167)
T 3kip_A 70 GFIIDRIHEAKRQ-GVGFVVIN---AGAYTHTSVGIRDALLGT--AIPFIEVHITNVHQREPFRHQSYLSDKAVAVIC 141 (167)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEE---CGGGGGTCHHHHHHHHHT--TCCEEEEESSCGGGSCGGGGCCSSGGGSSEEEE
T ss_pred HHHHHHHHHHHHC-CCEEEEEC---CCHHEEEHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 9999999996345-82489835---410112011169899854--998899981785224655546412653649993
No 125
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=45.50 E-value=7.8 Score=17.54 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=20.2
Q ss_pred HHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 9999986189987999975-888888899999999999841478679960332332
Q gi|254780747|r 55 ERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 (293)
Q Consensus 55 ~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S 109 (293)
+.++++-+ ++.+.|+++- .+|...+.-.+.|.+.-++ +.+...+++..++
T Consensus 140 ~~~~~ai~-~~Tklv~~Esp~NP~l~v~Di~~ia~ia~~----~gi~~vVDNT~at 190 (398)
T 2rfv_A 140 EEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIAHQ----QGALLVVDNTFMS 190 (398)
T ss_dssp HHHHHHCC-TTEEEEEEESSBTTTTBCCCHHHHHHHHHH----TTCEEEEECTTTC
T ss_pred HHHHHHCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHH----CCCEEEECCCCCC
T ss_conf 99998478-877089970799987563576899999744----3987996276347
No 126
>1gqo_A Dehydroquinase, dhqase; dehydratase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=40.53 E-value=16 Score=15.50 Aligned_cols=66 Identities=18% Similarity=0.322 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE-EECCCCCCCC----CCCCCCCCCCCC
Q ss_conf 999999999861899879999758888888999999999998414786799-6033233223----210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAG----YLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva-~~~~~~~S~~----Y~iAs~ad~I~a 123 (293)
-++++.|.++. ++..|+++. ||+-...+-.|+++|..+ +.|++- .+.+..+-.. -+++..|+..++
T Consensus 54 gelId~Iq~~~--~~~dgiIiN---pga~thtS~al~Dal~~~--~~p~iEVHlSNi~~RE~fR~~S~i~~~~~g~i~ 124 (143)
T 1gqo_A 54 GDLIDAIHEAE--EQYSGIVLN---PGALSHYSYAIRDAVSSI--SLPVVEVHLSNLYAREEFRHQSVIAPVAKGQIV 124 (143)
T ss_dssp HHHHHHHHHHT--TTCSEEEEE---CGGGGGTCHHHHHHHHTS--CSCEEEEESSCGGGSCGGGGCCSSGGGSSEEEE
T ss_pred HHHHHHHHHHC--CCCEEEEEC---CCHHHEEEEEHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 99999999835--576058856---601501001199999845--999899995671004675555520641549994
No 127
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=38.89 E-value=17 Score=15.34 Aligned_cols=12 Identities=25% Similarity=0.260 Sum_probs=4.0
Q ss_pred CCCCCCHHHHHH
Q ss_conf 666789999887
Q gi|254780747|r 166 PFSEVNPKAVQM 177 (293)
Q Consensus 166 p~~~~s~e~~~~ 177 (293)
|+..+.+..++.
T Consensus 166 Pt~gLD~~~~~~ 177 (240)
T 1ji0_A 166 PSLGLAPILVSE 177 (240)
T ss_dssp TTTTCCHHHHHH
T ss_pred CCCCCCHHHHHH
T ss_conf 754699999999
No 128
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=38.30 E-value=18 Score=15.28 Aligned_cols=66 Identities=17% Similarity=0.243 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCCCCCC----CCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999999999984147867996-033233223----210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAG----YLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~-~~~~~~S~~----Y~iAs~ad~I~a 123 (293)
-++++.|.++.+ +..|+++. |||-...+-.|+++|..+ +.|++-. +.+..+-.. -+++..|...++
T Consensus 61 geli~~i~~~~~--~~dgiIiN---Pga~ThtS~al~DAl~~~--~~p~iEVHlSNi~~RE~fR~~S~is~~~~g~I~ 131 (153)
T 3lwz_A 61 HALIDSIHQARG--NTDFILIN---PAAFTHTSVALRDALLGV--QIPFIEIHLSNVHAREPFRHHSYLSDIAVGVIC 131 (153)
T ss_dssp HHHHHHHHHHTT--TCSEEEEE---CGGGGGTCHHHHHHHHHH--TCCEEEEESSCGGGSCGGGGCCSSGGGSSEEEE
T ss_pred HHHHHHHHHHHC--CCCEEEEC---CCCCEEEHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 999999999746--57669974---764032037799999845--999899995484124664545533741449994
No 129
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=36.59 E-value=19 Score=15.11 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 69999999998618998799997588888889999999999984
Q gi|254780747|r 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 (293)
Q Consensus 50 ~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~ 93 (293)
++++++.|+++.+|+++.||++.+-=|.-.-...+++.++|.--
T Consensus 78 e~el~~~I~~lN~d~~v~GIiVqlPlP~~~~~d~~~i~~~I~p~ 121 (301)
T 1a4i_A 78 ESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPE 121 (301)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGG
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCC
T ss_conf 99999999987157752204664148887885989998557966
No 130
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=35.62 E-value=12 Score=16.27 Aligned_cols=66 Identities=6% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC--CCCCCCCCCCCCH
Q ss_conf 9999986189987999975-888888899999999999841478679960332332232--1000111000130
Q gi|254780747|r 55 ERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY--LISCASNIIVAAE 125 (293)
Q Consensus 55 ~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y--~iAs~ad~I~a~p 125 (293)
+.++++-+ ++.+.|++.- .+|...+.-.+.|.+.-+ + +.+...+++..++.-+ -+.-.+|-++-+-
T Consensus 141 ~~~~~ai~-~~Tklv~~EspsNP~l~v~Di~~ia~ia~---~-~gi~~vVDNT~atP~~~~Pl~~GaDiVvhS~ 209 (398)
T 1gc0_A 141 QALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIAR---K-HGATVVVDNTYCTPYLQRPLELGADLVVHSA 209 (398)
T ss_dssp HHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHG---G-GTCEEEEECTTTHHHHCCGGGGTCSEEEEET
T ss_pred HHHHHHCC-CCCEEEEEECCCCCCEEECCHHHHHHHHH---H-CCCEEEEECCCCCCCCCCHHHHCCCEEEEEC
T ss_conf 99998558-78629999448997404166799999999---8-2997997468567460787896998999854
No 131
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=35.57 E-value=20 Score=15.01 Aligned_cols=42 Identities=26% Similarity=0.460 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 86999999999861899879999758888888999999999998
Q gi|254780747|r 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 (293)
Q Consensus 49 ~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~ 92 (293)
+++++++.|+++.+|++|.||++..--|.+-- .+++.++|.-
T Consensus 76 s~~el~~~I~~LN~D~~V~GIivQlPlP~~~~--~~~i~~~I~p 117 (285)
T 3l07_A 76 TESELLELIDQLNNDSSVHAILVQLPLPAHIN--KNNVIYSIKP 117 (285)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEEECSSCCTTSC--HHHHHHHSCG
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--HHHHHHCCCC
T ss_conf 89999999999964678677996067655610--6889860495
No 132
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1
Probab=35.19 E-value=20 Score=14.97 Aligned_cols=65 Identities=14% Similarity=0.374 Sum_probs=38.2
Q ss_pred CCEEEEEEEEEEECCHHHHHHHHHHHHCC-------------CCCCEEEEECCCCCCCHHHH--------HHHHHHHHHH
Q ss_conf 87289999766623869999999998618-------------99879999758888888999--------9999999984
Q gi|254780747|r 35 SPHVARIAIRGQIEDSQELIERIERISRD-------------DSATALIVSLSSPGGSAYAG--------EAIFRAIQKV 93 (293)
Q Consensus 35 ~~~i~~i~i~G~I~~~~~l~~~l~~a~~d-------------~~ik~ivL~i~SpGG~~~~~--------~~i~~ai~~~ 93 (293)
+-+|.+|++.|.+ ++..++++++... .++.+||| |||..... ..+.++|.++
T Consensus 3 ~~kigvl~~~Gn~---~~~~~al~~lg~~~~~v~~v~~~~~l~~~d~lIL----PG~gs~~~~~~~~~~~~~~~~~i~~~ 75 (227)
T 2abw_A 3 EITIGVLSLQGDF---EPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVI----PGGESTTVRRCCAYENDTLYNALVHF 75 (227)
T ss_dssp CEEEEEECTTSCC---HHHHHHHHTTCCTTEEEEEECSHHHHHTCSEEEE----CCSCHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCH---HHHHHHHHHHCCCCCEEEEECCHHHHHCCCEEEE----CCCCHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 8789999558869---9999999983789847999499899827999999----89965999999998766777899999
Q ss_pred -C-CCCCEEEEECCC
Q ss_conf -1-478679960332
Q gi|254780747|r 94 -K-NRKPVITEVHEM 106 (293)
Q Consensus 94 -k-~~kpvva~~~~~ 106 (293)
+ .++|+.--|.++
T Consensus 76 ~~~~~~PilGIClG~ 90 (227)
T 2abw_A 76 IHVLKKPIWGTCAGC 90 (227)
T ss_dssp HHTSCCCEEEETHHH
T ss_pred HHHCCCCEEEECHHH
T ss_conf 985399179850568
No 133
>1qh4_A Creatine kinase; cancer, cellular energy metabolism, guanidino kinase, neurodegenerative disorders, transferase; 1.41A {Gallus gallus} SCOP: a.83.1.1 d.128.1.2 PDB: 3b6r_A* 3drb_A* 3dre_A 1g0w_A 1i0e_A 1u6r_A* 1vrp_A* 2crk_A
Probab=33.02 E-value=22 Score=14.75 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=44.5
Q ss_pred CCCCHHHHH-HHHHHHHHH----CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHCCCHHHHHHHHHH
Q ss_conf 888889999-999999984----147867996033233223210001110001301353455-56530210245677742
Q gi|254780747|r 76 PGGSAYAGE-AIFRAIQKV----KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLG 149 (293)
Q Consensus 76 pGG~~~~~~-~i~~ai~~~----k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsi-Gv~~~~~~~~~ll~k~g 149 (293)
+|+.+-.+- .+.+++..+ ++++--++|-.. =||+.+|+.+==..=..|..-.+ ++ .....+++.+.++|
T Consensus 241 ~G~~l~~~~~r~~~~~~~le~~i~~~~l~Fafd~~----lGYLTscPtNlGTGlRaSV~l~LP~L-~~~~~~~~i~~~lg 315 (380)
T 1qh4_A 241 KGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWNPH----LGYILTCPSNLGTGLRAGVHIKLPNL-GKHEKFGEVLKRLR 315 (380)
T ss_dssp ESSCHHHHHHHHHHHHHHHHHHHHHTTCCBCEETT----TEECCSSGGGCBTCCEEEEEEECHHH-HTSTTHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC----CEEEECCCCCCCCCEEEEEEEECCCC-CCCHHHHHHHHHCC
T ss_conf 78889999999999999999998755865121588----02552078777655489999987766-64355999999839
Q ss_pred HCCEEEEECCCC-CCCCCC-----CCCCHHHHHHHHHHHHHH
Q ss_conf 042255315521-123466-----678999988777776666
Q gi|254780747|r 150 VSIKSVKSSPMK-AEPSPF-----SEVNPKAVQMMQDVVDSS 185 (293)
Q Consensus 150 i~~~~~~~g~~K-~~~~p~-----~~~s~e~~~~~~~~l~~~ 185 (293)
+.++.+. |+.. +.+..| ..+...+.+.++.+.+..
T Consensus 316 l~vRG~~-Ge~s~~~g~iy~ISN~~~LG~tE~eiv~~l~~~v 356 (380)
T 1qh4_A 316 LQKRGTG-GVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGV 356 (380)
T ss_dssp EEEECCC-CSTTTTTTTEEEEEECCCSSSCHHHHHHHHHHHH
T ss_pred CEEECCC-CCCCCCCCCEEEEECHHHCCCCHHHHHHHHHHHH
T ss_conf 6650167-8877566988997763414679999999999999
No 134
>1hq1_A Signal recognition particle protein; protein-RNA complex, double helix, tetraloop, internal loop, SRP, ribonucleoprotein; HET: CCC; 1.52A {Escherichia coli} SCOP: a.36.1.1 PDB: 3lqx_A* 2pxb_A 2pxd_A 2pxe_A 2pxf_A 2pxk_A 2pxl_A 2pxp_A 2pxq_A 2pxt_A 2pxu_A 2pxv_A
Probab=33.01 E-value=14 Score=15.86 Aligned_cols=74 Identities=11% Similarity=0.115 Sum_probs=40.6
Q ss_pred HHHHH-HHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 34555-65302102456777420422553155211234666789999887777766666778999985149998899887
Q gi|254780747|r 129 VGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 (293)
Q Consensus 129 vGsiG-v~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~ 207 (293)
+|+++ +..-.|.+....++...+...-....|+... ..||+++|+.-. +++. .=...||++-|.+.++++++
T Consensus 17 mG~l~~i~~miPG~~~~~~~~~~~~~~~~lk~~~~Ii---~SMT~~Er~~p~-ll~~---sR~~RIA~GSG~~~~eV~~L 89 (105)
T 1hq1_A 17 MGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAII---NSMTMKERAKPE-IIKG---SRKRRIAAGSGMQVQDVNRL 89 (105)
T ss_dssp -------------------------CCSSHHHHHHHH---HTSCHHHHHCGG-GCCH---HHHHHHHHHHTCCHHHHHHH
T ss_pred CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHCCHHHHCCCC-CCCC---CHHHHHHCCCCCCHHHHHHH
T ss_conf 3899999977889530157888644188999999999---708999863973-4562---39989872389999999999
Q ss_pred HC
Q ss_conf 34
Q gi|254780747|r 208 SD 209 (293)
Q Consensus 208 ~~ 209 (293)
..
T Consensus 90 lk 91 (105)
T 1hq1_A 90 LK 91 (105)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 135
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=32.56 E-value=22 Score=14.70 Aligned_cols=40 Identities=10% Similarity=0.001 Sum_probs=19.4
Q ss_pred CHHHHHHHHCCCCCCHHHHHHCCCCCCCC-----CHHHHHHHHHH
Q ss_conf 98899887349823788998779806238-----98999999997
Q gi|254780747|r 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVG-----GQEEVWQSLYA 239 (293)
Q Consensus 200 ~~~~~~~~~~g~~~~~~~A~~~GLvD~ig-----~~~~a~~~l~~ 239 (293)
..+...+......+.|-..+..|.+|.+- +..+.++.+..
T Consensus 100 ~~~~a~~~~~~~~~~a~~mv~~G~aD~lv~G~~~~~~~~l~~~l~ 144 (329)
T 1td9_A 100 TEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQ 144 (329)
T ss_dssp CHHHHHHHTTSHHHHHHHHHHTTSCSEEEECTTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCHHHHHHHHH
T ss_conf 099999998877889999896557322113776670999999996
No 136
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreductase; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=32.47 E-value=22 Score=14.70 Aligned_cols=169 Identities=15% Similarity=0.073 Sum_probs=75.5
Q ss_pred CCCCCEEEEECCCCCCCH----HHHHHHHHHHHHHCCCCCEEEEECCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 899879999758888888----999999999998414786799603323322--32100011100013013534555653
Q gi|254780747|r 63 DDSATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASA--GYLISCASNIIVAAETSLVGSIGVLF 136 (293)
Q Consensus 63 d~~ik~ivL~i~SpGG~~----~~~~~i~~ai~~~k~~kpvva~~~~~~~S~--~Y~iAs~ad~I~a~p~s~vGsiGv~~ 136 (293)
+-.+.+|++.=.--||-. .....+...+.+. .+.|+++. ++.+.+. ..+++..||-+++-.-- +.+- =..
T Consensus 136 ~~G~D~li~qG~eaGGh~g~~~~~~~~L~~~v~~~-~~iPviaA-GGI~~g~~iaaal~lGA~gV~~GTrf-l~t~-Es~ 211 (328)
T 2gjl_A 136 RLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANR-LRVPIIAS-GGFADGRGLVAALALGADAINMGTRF-LATR-ECP 211 (328)
T ss_dssp HTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTT-CCSCEEEE-SSCCSHHHHHHHHHHTCSEEEESHHH-HTSS-SSC
T ss_pred HHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHH-CCCCEEEC-CCCCCHHHHHHHHHCCCCHHEECCEE-EECC-CCC
T ss_conf 82999212027766667787754166758999873-37867713-66566699999984395120564313-4146-665
Q ss_pred CCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC-CHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
Q ss_conf 0210245677742042255315521123466678-99998877--77766666778999985149998899887349823
Q gi|254780747|r 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 (293)
Q Consensus 137 ~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~-s~e~~~~~--~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~ 213 (293)
.+..+|+.+-+.+-+-.++.... .+.|.+-+ ++..++.. +......|..+.......|........+...+-+|
T Consensus 212 ~~~~~K~~i~~a~~~dt~~~~~~---~g~p~R~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~a~~~Gd~~~~~~~ 288 (328)
T 2gjl_A 212 IHPAVKAAIRAADERSTDLIMRS---LRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWS 288 (328)
T ss_dssp SCHHHHHHHHHCCTTCEEEECGG---GTCCEEEECSHHHHHHHHHHHTSCCCGGGTHHHHCHHHHHHHHHHCCTTSSCCB
T ss_pred CHHHHHHHHHHCCCCCEEEEEEE---CCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 62999999985787685788753---477404226475799986775269998999998517889999976995512073
Q ss_pred CHHHHHHCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 7889987798062389899999999741
Q gi|254780747|r 214 TGAEAKKVGLIDVVGGQEEVWQSLYALG 241 (293)
Q Consensus 214 ~~~~A~~~GLvD~ig~~~~a~~~l~~~~ 241 (293)
.|+ -.|+|+++-+-.|.++++.+..
T Consensus 289 aGq---~vg~i~~i~sv~eiv~~l~~ea 313 (328)
T 2gjl_A 289 AGM---VQGLIDDEPACAELLRDIVEQA 313 (328)
T ss_dssp CCG---GGGGCCCCCCHHHHHHHHHHHH
T ss_pred CCH---HHHCCCCCCCHHHHHHHHHHHH
T ss_conf 070---5400578987999999999999
No 137
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=32.36 E-value=17 Score=15.41 Aligned_cols=65 Identities=14% Similarity=0.088 Sum_probs=35.2
Q ss_pred HHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC--CCCCCCCCCCC
Q ss_conf 9999986189987999975-8888888999999999998414786799603323322321--00011100013
Q gi|254780747|r 55 ERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL--ISCASNIIVAA 124 (293)
Q Consensus 55 ~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~--iAs~ad~I~a~ 124 (293)
+.++++. +++.+.|++.- .+|-..+.-.+.|++.-++ +.+...+++..++.-+. +...||-++-+
T Consensus 157 ~~~~~~i-~~~t~lI~~EspsNP~l~v~Di~~i~~iA~~----~g~~~vVDNT~atP~~~~Pl~~GaDIVvhS 224 (414)
T 3ndn_A 157 SQWERAL-SVPTQAVFFETPSNPMQSLVDIAAVTELAHA----AGAKVVLDNVFATPLLQQGFPLGVDVVVYS 224 (414)
T ss_dssp HHHHHHT-SSCCSEEEEESSCTTTCCCCCHHHHHHHHHH----TTCEEEEECTTTHHHHCCCGGGTCSEEEEE
T ss_pred HHHHHHH-CCCCEEEEECCCCCCCEECCCHHHHHHHHHH----CCCEEEEECCCCCCCCCCCCCCCCCEEEEE
T ss_conf 7899763-4144599945888974212670999999998----199799978876756457740005468853
No 138
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=32.25 E-value=9.2 Score=17.08 Aligned_cols=107 Identities=18% Similarity=0.166 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCCEEEEE-CCCC---CCCCCCCCCCC--CCC
Q ss_conf 699999999986189987999975888888899999999999841--478679960-3323---32232100011--100
Q gi|254780747|r 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEV-HEMA---ASAGYLISCAS--NII 121 (293)
Q Consensus 50 ~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k--~~kpvva~~-~~~~---~S~~Y~iAs~a--d~I 121 (293)
.+.+.+.|+.+.+..+.+.|++.-..+-+ .-.+.|...+++++ -+.||+.+- .++. .+.||.+|..+ +++
T Consensus 119 ~~kL~~aI~e~~~~~~P~~I~V~tTC~~e--lIGDDi~~v~~~~~~~~g~pVi~v~~~Gf~g~s~~~G~~~a~~ai~~~l 196 (533)
T 1mio_A 119 VNKLKDAIHEAYEMFHPAAIGVYATCPVG--LIGDDILAVAATASKEIGIPVHAFSCEGYKGVSQSAGHHIANNTVMTDI 196 (533)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEECCCHHHH--HHTCCHHHHHHHHHHHHSSCEEECCCCTTSSSSTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCHHH--HHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999999999985499899997787899--8626899999998897589769987786678654218999999999984
Q ss_pred CCCH--HH---HHHHHHH---HHCCCHHHHHHHHHHHCCEEEEEC
Q ss_conf 0130--13---5345556---530210245677742042255315
Q gi|254780747|r 122 VAAE--TS---LVGSIGV---LFQYPYVKPFLDKLGVSIKSVKSS 158 (293)
Q Consensus 122 ~a~p--~s---~vGsiGv---~~~~~~~~~ll~k~gi~~~~~~~g 158 (293)
.... .. .|..+|- .....-++++|+++|+++..+-.|
T Consensus 197 ~~~~~~~~~~~~VNiiG~~~~~~D~~ei~~lL~~~Gi~v~~~~~g 241 (533)
T 1mio_A 197 IGKGNKEQKKYSINVLGEYNIGGDAWEMDRVLEKIGYHVNATLTG 241 (533)
T ss_dssp TBCCCCCCCTTEEEEEEECCBTSHHHHHHHHHHHHTCEEEEEEET
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCC
T ss_conf 256776677865999888888436999999999839964897289
No 139
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=31.10 E-value=23 Score=14.55 Aligned_cols=10 Identities=30% Similarity=0.710 Sum_probs=4.3
Q ss_pred HHHHHHHHHC
Q ss_conf 4567774204
Q gi|254780747|r 142 KPFLDKLGVS 151 (293)
Q Consensus 142 ~~ll~k~gi~ 151 (293)
.++++++|+.
T Consensus 134 ~~~l~~vgl~ 143 (262)
T 1b0u_A 134 LKYLAKVGID 143 (262)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHCCCC
T ss_conf 9999986992
No 140
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=31.02 E-value=23 Score=14.54 Aligned_cols=44 Identities=27% Similarity=0.446 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 8699999999986189987999975888888899999999999841
Q gi|254780747|r 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 (293)
Q Consensus 49 ~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k 94 (293)
+.+++++.|+++.+|+++.||++..--|++-- .+++.++|.--|
T Consensus 75 t~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~--~~~i~~~I~p~K 118 (285)
T 3p2o_A 75 TQNELLALINTLNHDDSVHGILVQLPLPDHIC--KDLILESIISSK 118 (285)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEEECSCCCTTSC--HHHHHHHSCGGG
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--HHHHHHCCCCCC
T ss_conf 78999999998733576217998558985425--488986288743
No 141
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent enzyme, lyase, cytoplasm, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=30.77 E-value=23 Score=14.52 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=31.4
Q ss_pred CHHHHHHHHHH-----HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 86999999999-----861899879999758888888999999999998414786799
Q gi|254780747|r 49 DSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 (293)
Q Consensus 49 ~~~~l~~~l~~-----a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva 101 (293)
+.+.+.+.|++ +....+.+.+++-.-|.-|.....++|.+.+.+. +.++++
T Consensus 291 ~~e~i~~~I~~~p~~~~~~~~~~~~vvit~~TYdG~~~dl~~I~~l~~~~--~~~llv 346 (755)
T 2vyc_A 291 QPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKT--SDRLHF 346 (755)
T ss_dssp SHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTT--CSEEEE
T ss_pred CHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHC--CCEEEE
T ss_conf 99999999986924345414788589996577686506999999999872--993896
No 142
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=30.16 E-value=24 Score=14.45 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-C-CCCCEEE
Q ss_conf 9999999998618998799997588888889999999999984-1-4786799
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-K-NRKPVIT 101 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~-k-~~kpvva 101 (293)
..+.+.+++..++ ..|+|+-- |+- ..++-+.+|... + .+||||.
T Consensus 61 ~~la~~i~~~~~~--~dGvVVtH----GTD-Tl~~TA~~Ls~~~~~~~kPVVl 106 (328)
T 1wls_A 61 ERLAKEIEKEVWE--YDGIVITH----GTD-TMAYSASMLSFMLRNPPIPIVL 106 (328)
T ss_dssp HHHHHHHHHHTTT--CSEEEEEC----CGG-GHHHHHHHHHHHEESCSSEEEE
T ss_pred HHHHHHHHHHHHC--CCCEEEEC----CCC-HHHHHHHHHHHHHHCCCCCEEE
T ss_conf 9999999987615--89889966----863-2999999999997479998899
No 143
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=29.61 E-value=25 Score=14.39 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=11.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 34666789999887777766666
Q gi|254780747|r 164 PSPFSEVNPKAVQMMQDVVDSSY 186 (293)
Q Consensus 164 ~~p~~~~s~e~~~~~~~~l~~~~ 186 (293)
-||+..+.+..++.+..++..+.
T Consensus 186 DEPtsgLD~~~~~~i~~ll~~l~ 208 (279)
T 2ihy_A 186 DEPAAGLDFIARESLLSILDSLS 208 (279)
T ss_dssp ESTTTTCCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 58865699999999999999999
No 144
>1njh_A Protein YOJF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, unknown function; 1.70A {Bacillus subtilis} SCOP: b.128.1.1
Probab=28.95 E-value=25 Score=14.32 Aligned_cols=44 Identities=14% Similarity=0.230 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9999999999841478679960332332232100011100013013534
Q gi|254780747|r 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 (293)
Q Consensus 82 ~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vG 130 (293)
..+++.+.|.+|. ++|||...+.. +|+| |++.|+-+++..+.+-
T Consensus 8 ~~~~Vq~~L~~~~-~~~VYiHlETT--nGaY--a~H~d~~~~~agafiR 51 (119)
T 1njh_A 8 IKEDVQASLERYA-DRPVYIHLETT--TGSY--SAHLNEKNMTVVAYIR 51 (119)
T ss_dssp CHHHHHHHHHHTT-TSCEEEEEEEE--ECC------------EEEEEEE
T ss_pred CHHHHHHHHHHHC-CCCEEEEEEEC--CHHH--HHHCCCCCCCCEEEEE
T ss_conf 8999999999845-99549999843--6266--6525755676104887
No 145
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfuration; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=28.64 E-value=24 Score=14.46 Aligned_cols=64 Identities=8% Similarity=0.083 Sum_probs=34.5
Q ss_pred HHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC--CCCCCCCCCC
Q ss_conf 9999986189987999975-8888888999999999998414786799603323322321--0001110001
Q gi|254780747|r 55 ERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL--ISCASNIIVA 123 (293)
Q Consensus 55 ~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~--iAs~ad~I~a 123 (293)
+.++++. +++.+.|+++- .+|-..+.-.+.|++.-+ ++.+...+++..++..+. +...||-++-
T Consensus 208 e~~~~ai-~~~TklVf~EspsNP~l~v~DI~~ia~iA~----~~gi~lVVDNT~aTP~~~~PL~~GADIVvh 274 (464)
T 1ibj_A 208 DEVAAAI-GPQTKLVWLESPTNPRQQISDIRKISEMAH----AQGALVLVDNSIMSPVLSRPLELGADIVMH 274 (464)
T ss_dssp HHHHHHC-CSSEEEEEECSSCTTTCCCCCHHHHHHHHH----TTTCEEEEECTTTCTTTCCGGGTTCSEEEE
T ss_pred HHHHHHH-CCCCEEEEECCCCCCCCCHHHHHHHHHHHH----HCCCEEEEECCCCCCCEECCCCCCCCEEEE
T ss_conf 3466651-667249992489997441443799999987----639869998985465350455558888997
No 146
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi}
Probab=28.49 E-value=26 Score=14.27 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999998618998799997588888889999999999984147867996033233223210001110001
Q gi|254780747|r 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 (293)
Q Consensus 51 ~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a 123 (293)
++.+.-......++++ ++|+=-|.+-++.+...+.+.|++++..+..+.++.+.- +.+...||+|..
T Consensus 234 ~QRvaIA~aL~~~pdv--LlLDEPTs~LD~~~r~~l~~~l~~l~~~g~tvIvVsHdl----~~l~~l~drV~v 300 (607)
T 3bk7_A 234 LQRVAIAAALLRKAHF--YFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDL----AVLDYLSDVIHV 300 (607)
T ss_dssp HHHHHHHHHHHSCCSE--EEEECTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCH----HHHHHHCSEEEE
T ss_pred HHHHHHHHHHCCCCCE--EEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHCCEEEE
T ss_conf 9999999985259877--860688455999999999999986552387599983239----999865489999
No 147
>2yz2_A Putative ABC transporter ATP-binding protein TM_0222; cobalt transport, hydrolase, inner membrane, membrane, nucleotide- binding; 2.30A {Thermotoga maritima MSB8}
Probab=28.44 E-value=26 Score=14.27 Aligned_cols=18 Identities=11% Similarity=0.289 Sum_probs=7.3
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 466678999988777776
Q gi|254780747|r 165 SPFSEVNPKAVQMMQDVV 182 (293)
Q Consensus 165 ~p~~~~s~e~~~~~~~~l 182 (293)
||+..+.+..++.+..++
T Consensus 164 EPt~gLD~~~~~~i~~~i 181 (266)
T 2yz2_A 164 EPLVGLDREGKTDLLRIV 181 (266)
T ss_dssp STTTTCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHH
T ss_conf 875557999999999999
No 148
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=27.26 E-value=27 Score=14.14 Aligned_cols=15 Identities=27% Similarity=0.366 Sum_probs=9.5
Q ss_pred CCCCEEEEEEEEEEE
Q ss_conf 778728999976662
Q gi|254780747|r 33 DNSPHVARIAIRGQI 47 (293)
Q Consensus 33 ~~~~~i~~i~i~G~I 47 (293)
...|+|++|.--|+|
T Consensus 7 ~~~pkVlvi~TGGTI 21 (337)
T 4pga_A 7 QKLANVVILATGGTI 21 (337)
T ss_dssp -CCCEEEEEEEESGG
T ss_pred CCCCEEEEEECCCCC
T ss_conf 999849999788864
No 149
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=27.16 E-value=13 Score=16.19 Aligned_cols=43 Identities=16% Similarity=0.254 Sum_probs=18.1
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCC---CCCCHHHHHHHHHHHHHHH
Q ss_conf 45677742042255315521123466---6789999887777766666
Q gi|254780747|r 142 KPFLDKLGVSIKSVKSSPMKAEPSPF---SEVNPKAVQMMQDVVDSSY 186 (293)
Q Consensus 142 ~~ll~k~gi~~~~~~~g~~K~~~~p~---~~~s~e~~~~~~~~l~~~~ 186 (293)
++.+++.||+...+-. +++..+.. ..+++++.+.+++++++.+
T Consensus 155 ~~~l~~~gi~~~sL~~--l~dl~~~~~~~~~i~~~~~~~v~~~l~~~~ 200 (205)
T 2wns_A 155 KDKLQAHGIRLHSVCT--LSKMLEILEQQKKVDAETVGRVKRFIQEAH 200 (205)
T ss_dssp HHHHHTTTCEEEEEEE--HHHHHHHHHHTTSSCHHHHHHHHHHHHC--
T ss_pred HHHHHHCCCCEEEECC--HHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999977994999750--999999999869999999999999998634
No 150
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=26.89 E-value=27 Score=14.09 Aligned_cols=16 Identities=31% Similarity=0.299 Sum_probs=8.3
Q ss_pred HCCCCCCCCCHHHHHH
Q ss_conf 7798062389899999
Q gi|254780747|r 220 KVGLIDVVGGQEEVWQ 235 (293)
Q Consensus 220 ~~GLvD~ig~~~~a~~ 235 (293)
+.|=|=+.|+.++.++
T Consensus 262 ~~G~Iv~~Gt~~eLl~ 277 (306)
T 3nh6_A 262 KDGCIVERGRHEALLS 277 (306)
T ss_dssp ETTEEEEEECHHHHHH
T ss_pred ECCEEEEECCHHHHHH
T ss_conf 8999999889999987
No 151
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genomics, SGC stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=26.88 E-value=25 Score=14.37 Aligned_cols=66 Identities=12% Similarity=0.145 Sum_probs=33.0
Q ss_pred HHHHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC--CCCCCCCCCC
Q ss_conf 99999986189987999975-8888888999999999998414786799603323322321--0001110001
Q gi|254780747|r 54 IERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL--ISCASNIIVA 123 (293)
Q Consensus 54 ~~~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~--iAs~ad~I~a 123 (293)
.+.++++- +++.+.|+++- .+|-..+.-.+.|.+.- ++.+.++..+++..++.-.. +.-.||-++-
T Consensus 141 ~~~~~~~i-~~~t~lv~~EspsNP~l~v~Di~~ia~la---~~~g~~~~vvDNT~atP~~~~Pl~~GaDiVvh 209 (403)
T 3cog_A 141 IKLLEAAI-TPETKLVWIETPTNPTQKVIDIEGCAHIV---HKHGDIILVVDNTFMSPYFQRPLALGADISMY 209 (403)
T ss_dssp HHHHHHHC-CTTEEEEEEESSCTTTCCCCCHHHHHHHH---TSSSCCEEEEECTTTCTTTCCTTTTTCSEEEE
T ss_pred HHHHHHHC-CCCCCEEEEECCCCCCCCCCCCHHHHHHH---HHCCCCEEEEECCCCCCCCCCHHHCCCCEEEE
T ss_conf 49999854-88986899988999877025838887887---61588659998986641116801307888997
No 152
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=26.65 E-value=28 Score=14.07 Aligned_cols=10 Identities=10% Similarity=0.232 Sum_probs=4.3
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|254780747|r 51 QELIERIERI 60 (293)
Q Consensus 51 ~~l~~~l~~a 60 (293)
..++..|-..
T Consensus 60 STLl~ll~gl 69 (260)
T 2ghi_A 60 STIAKLLYRF 69 (260)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHCC
T ss_conf 9999999478
No 153
>2o2z_A Hypothetical protein; NP_244435.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=26.41 E-value=28 Score=14.04 Aligned_cols=89 Identities=12% Similarity=0.053 Sum_probs=46.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01110001301353455565302102456777420422553155211234666789999887777766666778999985
Q gi|254780747|r 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 (293)
Q Consensus 116 s~ad~I~a~p~s~vGsiGv~~~~~~~~~ll~k~gi~~~~~~~g~~K~~~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~ 195 (293)
..||.|+..|++...||+-....+.+.+.+.+- +...+...+.-....+...|+.++ +++.+...+...+.+.|--
T Consensus 177 ~~AD~IIigPgs~~tSI~P~L~v~gi~~Ai~~s--~a~kv~v~ni~~~~gET~g~~~~d--~v~~i~~~l~~~~~D~vlv 252 (323)
T 2o2z_A 177 RKADVIVIGPGSLYTSVLPNLLVPGICEAIKQS--TARKVYICNVMTQNGETDGYTASD--HLQAIMDHCGVGIVDDILV 252 (323)
T ss_dssp HHCSEEEECSSCTTTTHHHHHTSTTHHHHHHHC--CSEEEEECCSBCCTTTSTTCCHHH--HHHHHHHHHCSSSCSEEEE
T ss_pred HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCCCHHH--HHHHHHHHHCCCCCCEEEE
T ss_conf 818907986874088887884427799998768--998899957888875335777799--9999999738688878998
Q ss_pred CCC-CCHHHHHHHH
Q ss_conf 149-9988998873
Q gi|254780747|r 196 SRN-IPYDKTLVLS 208 (293)
Q Consensus 196 ~R~-~~~~~~~~~~ 208 (293)
++. .+.+....+.
T Consensus 253 n~~~~~~~~~~~Y~ 266 (323)
T 2o2z_A 253 HGEPISDTVKAKYA 266 (323)
T ss_dssp ECSCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
T ss_conf 89979879999998
No 154
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B*
Probab=23.78 E-value=31 Score=13.73 Aligned_cols=18 Identities=6% Similarity=0.110 Sum_probs=12.1
Q ss_pred CCCCHHHHHHHHHHHHHH
Q ss_conf 678999988777776666
Q gi|254780747|r 168 SEVNPKAVQMMQDVVDSS 185 (293)
Q Consensus 168 ~~~s~e~~~~~~~~l~~~ 185 (293)
.++|+..+++.+.+-+.+
T Consensus 269 s~LTe~G~~QA~~L~~~l 286 (520)
T 2axn_A 269 SGLSSRGKKFASALSKFV 286 (520)
T ss_dssp CCBCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHC
T ss_conf 775989999999973003
No 155
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3h07_A
Probab=23.74 E-value=31 Score=13.73 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH--HHHHHHCCCHHHHHHHHHHHCCEEEEEC-C
Q ss_conf 999999999841478679960332332232100011100013013534--5556530210245677742042255315-5
Q gi|254780747|r 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG--SIGVLFQYPYVKPFLDKLGVSIKSVKSS-P 159 (293)
Q Consensus 83 ~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vG--siGv~~~~~~~~~ll~k~gi~~~~~~~g-~ 159 (293)
.+.|.++|+.+|+++||+++=++--..-|.++ .+|+.+-...-..+- .-|.+.... -.+..+++|+.+-+-... .
T Consensus 13 ~~~i~~ai~al~~G~~Viv~Dd~dRE~EgDlv-~aAe~iT~e~i~fm~~~~~GliC~a~-~~~~~~~L~Lp~m~~~~~~~ 90 (217)
T 1g57_A 13 FERVENALAALREGRGVMVLDDEDRENEGDMI-FPAETMTVEQMALTIRHGSGIVCLCI-TEDRRKQLDLPMMVENNTSA 90 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC----CCCEEEE-EETTTCCHHHHHHHHHHBCSCCEEEE-CHHHHHHTTCCBSCSSCCCT
T ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCEE-EEHHHCCHHHHHHHHHHCCCCEEECC-CHHHHHHCCCCCCCCCCCCC
T ss_conf 00599999999879979998689988751789-78575999999999994898889727-89999536999735556677
Q ss_pred CCC-------CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHH
Q ss_conf 211-------23-4666789999887777766666778999985149998899887349823788998779806238989
Q gi|254780747|r 160 MKA-------EP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 (293)
Q Consensus 160 ~K~-------~~-~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~g~~~~~~~A~~~GLvD~ig~~~ 231 (293)
++. +. ..++..|..+|...-. ..+. ++-..++.. .-|.+| .-.|..-|+..+-| .-
T Consensus 91 ~~~~ftvsVd~~~g~tTGISa~DRa~Ti~-----------~l~~-~~~~~~df~--~PGHV~-pL~a~~gGvl~R~G-HT 154 (217)
T 1g57_A 91 YGTGFTVTIEAAEGVTTGVSAADRITTVR-----------AAIA-DGAKPSDLN--RPGHVF-PLRAQAGGVLTRGG-HT 154 (217)
T ss_dssp TCCCBBSCEEESSSCSSSCSHHHHHHHHH-----------HHHS-TTCCGGGEE--EEEEEE-EEECCTTGGGTCCS-HH
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHH-----------HHHC-CCCCHHHCC--CCCCCC-CCCCCCCCCCCCCC-HH
T ss_conf 88850688742678668979999999999-----------8754-799946537--999448-62356798067896-89
Q ss_pred HHHHHHHHHCCCCCCCCEEEC
Q ss_conf 999999974187765301201
Q gi|254780747|r 232 EVWQSLYALGVDQSIRKIKDW 252 (293)
Q Consensus 232 ~a~~~l~~~~~~~~~~~~~~~ 252 (293)
|+--.|.++++....-.+-..
T Consensus 155 EaavdL~~lAGl~P~avi~Ei 175 (217)
T 1g57_A 155 EATIDLMTLAGFKPAGVLCEL 175 (217)
T ss_dssp HHHHHHHHHTTSCSCEEEEEB
T ss_pred HHHHHHHHHCCCCCCEEEEEE
T ss_conf 899999998199983899998
No 156
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, synthetic gene, isomerase; 1.60A {Candida albicans SC5314} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.68 E-value=31 Score=13.72 Aligned_cols=147 Identities=18% Similarity=0.093 Sum_probs=73.1
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH--HHHHHHCCCHHHHHHHHHHHCCEEEEECC----
Q ss_conf 999999841478679960332332232100011100013013534--55565302102456777420422553155----
Q gi|254780747|r 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG--SIGVLFQYPYVKPFLDKLGVSIKSVKSSP---- 159 (293)
Q Consensus 86 i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vG--siGv~~~~~~~~~ll~k~gi~~~~~~~g~---- 159 (293)
|-++|+.+|+++||+++=++--..-|-++ .+|..+-...-..+- +-|.+.... -++..+++|+.+-+-..+.
T Consensus 8 ie~ai~alk~G~~Viv~Dd~~RE~EgDlv-~~Ae~~t~e~i~fm~~~~~Glic~a~-~~~~~~~L~lp~m~~~~~~~~~~ 85 (204)
T 1tks_A 8 IEEALEAYKNGEFLIVMDDEDRENEGDLI-MAAELITQEKMAFLVRYSSGYVCVPL-SEERANQLELPPMLANRSDRHGT 85 (204)
T ss_dssp HHHHHHHHHTTCCEEEESSSCTTCBCEEE-EEGGGCCHHHHHHHHHTBCSCCEEEE-EHHHHHHTTCCBSCC------CC
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCEE-EEHHHCCHHHHHHHHHHCCCCEEEEE-CHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99999999889969998689987740589-78686999999999995897799974-88999226898645456787888
Q ss_pred -CCC---CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-CCCCCCHHHHHHCCCCCCCCCHHHH
Q ss_conf -211---23-46667899998877777666667789999851499988998873-4982378899877980623898999
Q gi|254780747|r 160 -MKA---EP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAEAKKVGLIDVVGGQEEV 233 (293)
Q Consensus 160 -~K~---~~-~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~-~g~~~~~~~A~~~GLvD~ig~~~~a 233 (293)
|.. +. ..++..|..+|...-..+-+ .+-..+ ++. -|.+| .-.|..-|+..+- +.-|+
T Consensus 86 ~f~v~vd~~~g~~TGISa~DRa~Tir~la~------------~~~~~~---df~~PGHv~-pl~a~~ggvl~R~-GHTEa 148 (204)
T 1tks_A 86 AYTITCDFAEGTTTGISAHDRALTTRSLAN------------PNSKPQ---DFIKPGHIL-PLRAVPGLLKKRR-GHTEA 148 (204)
T ss_dssp CBBCCEEESTTCSSSCSHHHHHHHHHHHHC------------TTCCGG---GEEEEEEEE-EEEECTTGGGTCC-CHHHH
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHC------------CCCCHH---HCCCCCCCC-CCEECCCCCCCCC-CHHHH
T ss_conf 535442166788899789999999999866------------799875---631799867-0102457775678-88899
Q ss_pred HHHHHHHCCCCCCCCEEE
Q ss_conf 999997418776530120
Q gi|254780747|r 234 WQSLYALGVDQSIRKIKD 251 (293)
Q Consensus 234 ~~~l~~~~~~~~~~~~~~ 251 (293)
--.|.++++....-.+-+
T Consensus 149 avdL~~lAGl~P~avicE 166 (204)
T 1tks_A 149 AVQLSTLAGLQPAGVICE 166 (204)
T ss_dssp HHHHHHHTTSCSBEEEEE
T ss_pred HHHHHHHCCCCCEEEEEE
T ss_conf 999999839996199999
No 157
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to P3F inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=23.66 E-value=31 Score=13.72 Aligned_cols=52 Identities=15% Similarity=0.082 Sum_probs=27.8
Q ss_pred HHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 999986189987999975-8888888999999999998414786799603323322
Q gi|254780747|r 56 RIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 (293)
Q Consensus 56 ~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~ 110 (293)
.++++. +++.+.|++.. .+|...+...+.|++.-++.. +.++..+++..++.
T Consensus 159 ~~~~~~-~~~t~~v~~EtpsNP~l~v~Di~~ia~~a~~~~--~g~~~vVDnT~atP 211 (415)
T 2fq6_A 159 DIVKHL-QPNTKIVFLESPGSITMEVHDVPAIVAAVRSVV--PDAIIMIDNTWAAG 211 (415)
T ss_dssp GGGGGC-CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHC--TTCEEEEECTTTTT
T ss_pred HHHHHC-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCC--CCCEEEEECCCCCH
T ss_conf 999753-765418998558988632135488899987515--79779997786453
No 158
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=23.30 E-value=32 Score=13.67 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=19.8
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCCEEEE
Q ss_conf 999999998618998799997588888889999999999984-147867996
Q gi|254780747|r 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITE 102 (293)
Q Consensus 52 ~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~-k~~kpvva~ 102 (293)
.+.+.|+++.++ ...|+|+-=.+ - ..++-+-+|.-+ +..||||.-
T Consensus 76 ~ia~~i~~~~~~-~~dG~VVtHGT----D-Tm~~TA~~Ls~~l~~~kPVVlT 121 (334)
T 3nxk_A 76 RLAKKIAKLFAE-GIDGVVITHGT----D-TMEETAYFLNLTIKSDKPVVLV 121 (334)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCS----T-THHHHHHHHHHHCCCCSCEEEE
T ss_pred HHHHHHHHHHHC-CCCEEEEECCC----C-HHHHHHHHHHHHHCCCCCEEEE
T ss_conf 999999976545-89869997885----2-4999999999972479976996
No 159
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomics; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=23.22 E-value=32 Score=13.66 Aligned_cols=64 Identities=17% Similarity=0.142 Sum_probs=35.4
Q ss_pred HHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC---CCCCCCCCCCCC
Q ss_conf 99986189987999975-888888899999999999841478679960332332232---100011100013
Q gi|254780747|r 57 IERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY---LISCASNIIVAA 124 (293)
Q Consensus 57 l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y---~iAs~ad~I~a~ 124 (293)
..++..+++.+.|+++. .+|-..+.-.+.|.+.-++. + +...+++.-+.+.| -+...||-++-+
T Consensus 136 ~~~~~~~~~t~lv~~EtpsNP~l~v~Di~~i~~iA~~~--g--~~~vVDnT~a~tP~~~~Pl~~GaDiVvhS 203 (421)
T 2ctz_A 136 EFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREK--G--VALIVDNTFGMGGYLLRPLAWGAALVTHS 203 (421)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH--T--CEEEEECGGGGGGTSCCGGGGTCSEEEEE
T ss_pred HHHHHCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHC--C--CEEEECCCCCCCEEECCCCCCCCCEEEEE
T ss_conf 99971588714999852899860644079999999976--9--74996465443504425423688899985
No 160
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=23.15 E-value=32 Score=13.65 Aligned_cols=20 Identities=10% Similarity=0.174 Sum_probs=8.8
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q ss_conf 34666789999887777766
Q gi|254780747|r 164 PSPFSEVNPKAVQMMQDVVD 183 (293)
Q Consensus 164 ~~p~~~~s~e~~~~~~~~l~ 183 (293)
-||+..+.+..++.+..++.
T Consensus 153 DEPts~LD~~~~~~i~~~l~ 172 (253)
T 2nq2_C 153 DEPTSALDLANQDIVLSLLI 172 (253)
T ss_dssp SSSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHH
T ss_conf 38754479999999999999
No 161
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, cytoplasm, thiolase fold; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=22.49 E-value=33 Score=13.57 Aligned_cols=74 Identities=12% Similarity=0.171 Sum_probs=37.7
Q ss_pred HHHHHHHHHCCC-CCCEEEEECCCCCCC-HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 999999986189-987999975888888-8999999999998414786799603323322321000111000130135
Q gi|254780747|r 53 LIERIERISRDD-SATALIVSLSSPGGS-AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 (293)
Q Consensus 53 l~~~l~~a~~d~-~ik~ivL~i~SpGG~-~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~ 128 (293)
+.+.|+++.=|+ .|..+++=--.++|. ..-+..+... ..+..+.|.+. ++..|+||.--+..++..|-+-...+
T Consensus 35 ~~~al~~agi~~~~Id~v~~G~~~~~~~g~~~ar~~al~-aGlp~~vp~~~-v~~~CaSg~~Ai~~A~~~I~sG~~dv 110 (392)
T 2vu1_A 35 ISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMK-AGVPQEATAWG-MNQLCGSGLRAVALGMQQIATGDASI 110 (392)
T ss_dssp HHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHH-TTCCTTSEEEE-EECGGGHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHCCCHHHCCEEEEEECCCCCCCCHHHHHHHHH-CCCCCCCCEEE-EECCCHHHHHHHHHHHHHHHCCCCCE
T ss_conf 999998709698997999999447656665699999997-79998776189-84542177899999999983897477
No 162
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=22.23 E-value=34 Score=13.54 Aligned_cols=22 Identities=14% Similarity=0.416 Sum_probs=12.6
Q ss_pred HHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 9999999986189987999975
Q gi|254780747|r 52 ELIERIERISRDDSATALIVSL 73 (293)
Q Consensus 52 ~l~~~l~~a~~d~~ik~ivL~i 73 (293)
.+.+.++++.++++..|+|+--
T Consensus 72 ~la~~i~~~~~~~~~dG~VVtH 93 (327)
T 1o7j_A 72 KLSQRVNELLARDDVDGVVITH 93 (327)
T ss_dssp HHHHHHHHHHTSTTCCEEEEEC
T ss_pred HHHHHHHHHHHCCCCCEEEEEC
T ss_conf 9999999985146886399966
No 163
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=22.23 E-value=34 Score=13.54 Aligned_cols=147 Identities=16% Similarity=0.191 Sum_probs=70.9
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH--HHHHHHCCCHHHHHHHHHHHCCEEEEECC-C
Q ss_conf 99999999841478679960332332232100011100013013534--55565302102456777420422553155-2
Q gi|254780747|r 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG--SIGVLFQYPYVKPFLDKLGVSIKSVKSSP-M 160 (293)
Q Consensus 84 ~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vG--siGv~~~~~~~~~ll~k~gi~~~~~~~g~-~ 160 (293)
..|-++|+.+|++|||+.+=++--..-|.++ .+|+.+-...-..+- +-|++.. +--.+..+++|+..-....++ +
T Consensus 13 ~~Ie~ai~al~~G~~Viv~Dd~dRE~EgDlv-~~Ae~~t~e~i~fm~~~~~Glic~-a~~~~~~~~L~Lp~m~~~~~~~~ 90 (233)
T 1k4i_A 13 DAIPDVIQAFKNGEFVVVLDDPSRENEADLI-IAAESVTTEQMAFMVRHSSGLICA-PLTPERTTALDLPQMVTHNADPR 90 (233)
T ss_dssp CCHHHHHHHHHTTCCEEEECCTTTTCCEEEE-EEGGGCCHHHHHHHHHHBCSCCEE-EECHHHHHHTTCCBSCSSCCCSS
T ss_pred CCHHHHHHHHHCCCEEEEEECCCCCCCCCEE-EEHHHCCHHHHHHHHHHCCCCEEE-EECHHHHHCCCCCCCCCCCCCCC
T ss_conf 6199999999889969999679988751589-786769999999999968986899-64888871268864124566655
Q ss_pred CCC---------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-CCCCCCHHHHHHCCCCCCCCCH
Q ss_conf 112---------346667899998877777666667789999851499988998873-4982378899877980623898
Q gi|254780747|r 161 KAE---------PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAEAKKVGLIDVVGGQ 230 (293)
Q Consensus 161 K~~---------~~p~~~~s~e~~~~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~-~g~~~~~~~A~~~GLvD~ig~~ 230 (293)
... ...++..|..+|...-..+- ..+-..++ +. -|.+| .-.|..-|+.-+-| .
T Consensus 91 ~~~~~~sv~~~~~~~~TGISa~DRa~Tir~la------------~~~~~~~d---f~~PGHvf-pL~a~~gGvl~R~G-H 153 (233)
T 1k4i_A 91 GTAYTVSVDAEHPSTTTGISAHDRALACRMLA------------APDAQPSH---FRRPGHVF-PLRAVAGGVRARRG-H 153 (233)
T ss_dssp CCCBBCCEEECSTTCSSSCSHHHHHHHHHHHH------------CTTCCGGG---EEEEEEEE-EEECCTTHHHHCCS-H
T ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH------------CCCCCHHH---HCCCCCCC-EEEECCCCCCCCCC-H
T ss_conf 57653047630577667879999999999963------------88888455---25997654-03552698268897-8
Q ss_pred HHHHHHHHHHCCCCCCCCE
Q ss_conf 9999999974187765301
Q gi|254780747|r 231 EEVWQSLYALGVDQSIRKI 249 (293)
Q Consensus 231 ~~a~~~l~~~~~~~~~~~~ 249 (293)
-|+--.|..+++....--+
T Consensus 154 TEaavdL~~lAGl~P~avi 172 (233)
T 1k4i_A 154 TEAGVELCRLAGKRPVAVI 172 (233)
T ss_dssp HHHHHHHHHHTTCCSBEEE
T ss_pred HHHHHHHHHHCCCCCCEEE
T ss_conf 8999999998099972899
No 164
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural genomics, joint center for structural genomics, JCSG; 2.10A {Thermotoga maritima MSB8} SCOP: c.37.1.12
Probab=22.05 E-value=34 Score=13.52 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=10.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 346667899998877777666
Q gi|254780747|r 164 PSPFSEVNPKAVQMMQDVVDS 184 (293)
Q Consensus 164 ~~p~~~~s~e~~~~~~~~l~~ 184 (293)
-||+..+.+..++.+..++..
T Consensus 171 DEPt~gLD~~~~~~i~~ll~~ 191 (256)
T 1vpl_A 171 DEPTSGLDVLNAREVRKILKQ 191 (256)
T ss_dssp ESTTTTCCHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHH
T ss_conf 789889798999999999999
No 165
>3bv8_A Tetrahydrodipicolinate acetyltransferase; PFAM08503, structural genomics, PSI-2, protein structure initiative; 1.75A {Staphylococcus aureus subsp}
Probab=22.05 E-value=34 Score=13.52 Aligned_cols=67 Identities=19% Similarity=0.279 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHCCCHHHHHHHHHHHCCEEEE
Q ss_conf 99999999998414786799603323322321000111000130135345556-5302102456777420422553
Q gi|254780747|r 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVK 156 (293)
Q Consensus 82 ~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiGv-~~~~~~~~~ll~k~gi~~~~~~ 156 (293)
.+++|.+.|..-+++-||-+|+.+....-.+. ..=+.|.... .|+ ++.+-..+.+|+...=+...++
T Consensus 5 dA~eII~yI~~skKkTPVKvYvkG~l~~i~~~---~~~k~fg~~~-----~~vlfGd~~~i~~~le~n~~~I~~y~ 72 (87)
T 3bv8_A 5 TAEEIIQYISDAKKFTPIKVYLNGNFEGITYP---ESFKVFGSEQ-----SKVIFCEADDWKPFYEAYGSQFEDIE 72 (87)
T ss_dssp CHHHHHHHHHHHTTCCEEEEEEEECCTTCCCC---TTCEEEEETT-----EEEEEEEHHHHHHHHHHHGGGEEEEE
T ss_pred CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC---CCEEEEECCC-----CEEEEECHHHHHHHHHHHHHHCCEEE
T ss_conf 99999999971898898799991562257676---5248993698-----57999319999999997263164799
No 166
>3cvj_A Putative phosphoheptose isomerase; NP_244191.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=22.04 E-value=34 Score=13.52 Aligned_cols=90 Identities=19% Similarity=0.195 Sum_probs=45.1
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCCC-------CCCCCCCCCCCCCCC---------------
Q ss_conf 879999758888888999999999998414-786799603323-------322321000111000---------------
Q gi|254780747|r 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMA-------ASAGYLISCASNIIV--------------- 122 (293)
Q Consensus 66 ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~-~kpvva~~~~~~-------~S~~Y~iAs~ad~I~--------------- 122 (293)
-.-+++-+...|-+.. +.++++..|+ +-|+++....-. .+.|.-++-.||.+.
T Consensus 108 ~~DvvI~iS~SG~t~~----vi~a~~~AK~~G~~vIaIT~~~~S~~~~~~h~~g~~L~~~ad~~id~~~~~gda~~~~~~ 183 (243)
T 3cvj_A 108 NKDVIMIISNSGRNTV----PVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAPVGDAGFQIAN 183 (243)
T ss_dssp TTCEEEEECSSCCSHH----HHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEECCCCTTSCCEECSS
T ss_pred CCCEEEEECCCCCCHH----HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCEEECCC
T ss_conf 9999999778999999----999999999879949998088767554323444462567367667667776543011146
Q ss_pred ----CCHHH-HHHHHHHHHCC--CHHHHHHHHHHHCCEEEEECCCC
Q ss_conf ----13013-53455565302--10245677742042255315521
Q gi|254780747|r 123 ----AAETS-LVGSIGVLFQY--PYVKPFLDKLGVSIKSVKSSPMK 161 (293)
Q Consensus 123 ----a~p~s-~vGsiGv~~~~--~~~~~ll~k~gi~~~~~~~g~~K 161 (293)
+.|++ +.+.. +.+. ...-..+.+-|++..+++++...
T Consensus 184 ~~~~~~~tst~~~~~--i~~~~~~~~~~~l~~~g~~~~v~~s~n~~ 227 (243)
T 3cvj_A 184 SEIYSGATSDSIGCF--LAQALIVETLHLLVQQGFEPPVFKSSNVD 227 (243)
T ss_dssp SSCEECCCHHHHHHH--HHHHHHHHHHHHHHHTTCCCCBCCCTTST
T ss_pred CCCCCCCHHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf 776767588999999--99999999999999769997500433788
No 167
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=21.97 E-value=29 Score=13.96 Aligned_cols=51 Identities=16% Similarity=0.172 Sum_probs=26.6
Q ss_pred HHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 999986189987999975-8888888999999999998414786799603323322
Q gi|254780747|r 56 RIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 (293)
Q Consensus 56 ~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~ 110 (293)
.++++. +++.+.|++.- .+|...+.....+..... +.+.++..+++..++.
T Consensus 75 ~~~~~i-~~~t~~i~~Es~~np~l~v~dl~~~~~~~a---~~~~~~~vvDnT~atp 126 (331)
T 1pff_A 75 NIEKHL-KPNTRIVYFETPANPTLKVIDIEDAVKQAR---KQKDILVIVDNTFASP 126 (331)
T ss_dssp HHHHTC-CTTEEEEEEESSCTTTCCCCCHHHHHHHHT---TSSSCEEEEECTTTHH
T ss_pred HHHHHH-HCCCEEEEECCCCCCCCCCCCHHHHHHHHH---CCCCCEEEEECEEECC
T ss_conf 999986-138718984267787763121466666654---0378489985749875
No 168
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=21.95 E-value=34 Score=13.51 Aligned_cols=41 Identities=24% Similarity=0.507 Sum_probs=31.8
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8699999999986189987999975888888899999999999
Q gi|254780747|r 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 (293)
Q Consensus 49 ~~~~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~ 91 (293)
+++++++.|+++.+|+++.||++..-=|.+-- .+++.++|.
T Consensus 75 s~~el~~~I~~LN~D~~V~GIlVQlPLP~~i~--~~~i~~~I~ 115 (288)
T 1b0a_A 75 SEAELLELIDTLNADNTIDGILVQLPLPAGID--NVKVLERIH 115 (288)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEEECSSCCTTSC--HHHHHTTSC
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--HHHHHHCCC
T ss_conf 99999999999847986454898569986431--033210468
No 169
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=21.69 E-value=34 Score=13.47 Aligned_cols=49 Identities=8% Similarity=0.190 Sum_probs=29.2
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 9999999986189987999975888888899999999999841478679960
Q gi|254780747|r 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 (293)
Q Consensus 52 ~l~~~l~~a~~d~~ik~ivL~i~SpGG~~~~~~~i~~ai~~~k~~kpvva~~ 103 (293)
+..+.++....+....-|+++++-||++- -++.+.|++.....||+...
T Consensus 37 ~~~eal~~l~~~~~~DlvllD~~mP~~~G---~e~l~~ir~~~p~~~iivlT 85 (154)
T 2qsj_A 37 TVSDALAFLEADNTVDLILLDVNLPDAEA---IDGLVRLKRFDPSNAVALIS 85 (154)
T ss_dssp SHHHHHHHHHTTCCCSEEEECC------C---HHHHHHHHHHCTTSEEEEC-
T ss_pred CHHHHHHHHHHCCCCCEEEECCCCCCCCH---HHHHHHHHHHCCCCCEEEEE
T ss_conf 89999999974599978998088899888---99999999878899799998
No 170
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=21.19 E-value=35 Score=13.41 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=36.5
Q ss_pred CCCCEEEEE-CCCCCCCHHHHHHHHHHHH-H--HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 998799997-5888888899999999999-8--41478679960332332232100011100013013534555
Q gi|254780747|r 64 DSATALIVS-LSSPGGSAYAGEAIFRAIQ-K--VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 (293)
Q Consensus 64 ~~ik~ivL~-i~SpGG~~~~~~~i~~ai~-~--~k~~kpvva~~~~~~~S~~Y~iAs~ad~I~a~p~s~vGsiG 133 (293)
+.|..|++= ..+.|... .+...+. . +..+.|.+. ++..|+||.--+..++..|-+-...++-..|
T Consensus 59 ~~Id~v~~G~~~~~g~g~----~~ar~~~l~~g~~~~vp~~~-Ve~aCaSG~~Ai~~A~~~I~sG~~dvvlagG 127 (393)
T 1afw_A 59 NLIEEVACGNVLNVGAGA----TEHRAACLASGIPYSTPFVA-LNRQCSSGLTAVNDIANKIKVGQIDIGLALG 127 (393)
T ss_dssp GGCCCEEEECSSSBGGGH----HHHHHHHHHTTCCTTSCEEE-EECGGGHHHHHHHHHHHHHHTTSCSEEEEEE
T ss_pred HHCCEEEEECCCCCCCCC----HHHHHHHHHCCCCCCCCEEE-ECCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 899999996688746553----79999999779998774057-6452179999999999855259997689976
No 171
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma- family, lyase; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=21.12 E-value=35 Score=13.40 Aligned_cols=64 Identities=8% Similarity=0.078 Sum_probs=33.0
Q ss_pred HHHHHHCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC--CCCCCCCCCC
Q ss_conf 999986189987999975-8888888999999999998414786799603323322321--0001110001
Q gi|254780747|r 56 RIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL--ISCASNIIVA 123 (293)
Q Consensus 56 ~l~~a~~d~~ik~ivL~i-~SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~~~S~~Y~--iAs~ad~I~a 123 (293)
.+.++..+++.+.|+++. .+|...+.-.+.|.+.-++ +.+...+++..++.-+. +...||-++-
T Consensus 191 ~~~~~~~~~~t~lv~~EspsNP~l~v~Di~~ia~lA~~----~g~~~vVDNT~atP~~~~Pl~~GADIVvh 257 (445)
T 1qgn_A 191 ALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHE----KGALVCIDGTFATPLNQKALALGADLVLH 257 (445)
T ss_dssp HHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHH----TTCEEEEECTTTCTTTCCTTTTTCSEEEE
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH----CCCEEEEECCCCCCCCCCCHHHCCCEEEE
T ss_conf 89985314664799788888977645576999999987----49979973685462557742316878998
No 172
>3d6k_A Putative aminotransferase; APC82464, structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=20.27 E-value=37 Score=13.29 Aligned_cols=53 Identities=6% Similarity=0.100 Sum_probs=33.9
Q ss_pred HHHHHHHHCCCCCCEEEEECC--CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 999999861899879999758--88888899999999999841478679960332
Q gi|254780747|r 54 IERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 (293)
Q Consensus 54 ~~~l~~a~~d~~ik~ivL~i~--SpGG~~~~~~~i~~ai~~~k~~kpvva~~~~~ 106 (293)
.+.++++.++.+.+.+++.-| .|-|.+...+++.+.++-.++.+-+++..++.
T Consensus 167 ~~~le~~~~~~~~~~i~~~pn~~NPTG~v~s~~~l~~i~~la~~~~~~~Ii~De~ 221 (422)
T 3d6k_A 167 MGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNA 221 (422)
T ss_dssp HHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEH
T ss_conf 9999998315897399966999999983288999999999998679878875201
Done!