BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780747|ref|YP_003065160.1| putative protease IV transmembrane protein [Candidatus Liberibacter asiaticus str. psy62] (293 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780747|ref|YP_003065160.1| putative protease IV transmembrane protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040424|gb|ACT57220.1| putative protease IV transmembrane protein [Candidatus Liberibacter asiaticus str. psy62] Length = 293 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 293/293 (100%), Positives = 293/293 (100%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI Sbjct: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI Sbjct: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD Sbjct: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL Sbjct: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP Sbjct: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 >gi|315121910|ref|YP_004062399.1| putative protease IV transmembrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495312|gb|ADR51911.1| putative protease IV transmembrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 295 Score = 352 bits (902), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 157/290 (54%), Positives = 221/290 (76%), Gaps = 2/290 (0%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRDD 64 K IK R+++ L+ L + YF+W S D +PHVARI I G I +D+++L++RI R+ DD Sbjct: 6 KNIKKRHIVYLLIALGITYFAWDSIFPDRTPHVARITISGSIGDDNEDLLDRIHRVGTDD 65 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 SA AL++ +SSPGG+ Y E++F A++KVK RKPV+T V +AAS GYLISCASN I+A+ Sbjct: 66 SAKALVLWISSPGGTVYGSESLFEAVKKVKLRKPVVTLVGGVAASGGYLISCASNAIIAS 125 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++S++GSIGV YP KPFLDKLG+S++++KSSP+K EPSP+S+ NP+ +Q ++++V+ Sbjct: 126 QSSIIGSIGVFLSYPQFKPFLDKLGISVETIKSSPLKGEPSPYSKPNPQTIQNLKELVND 185 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 YHWFV+LVSE R+IPYDK L LS G +W+G +AKK+GLID +GG +EVW+SLY+LGVD+ Sbjct: 186 EYHWFVKLVSEERHIPYDKALTLSSGLVWSGTKAKKLGLIDAIGGNDEVWKSLYSLGVDK 245 Query: 245 SIRKIKDWNPPKNYWFCDLK-NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 ++ IKDW PKNYWF D + S LED++P ++Q +GL AVW P Sbjct: 246 DVKIIKDWKSPKNYWFFDFNFKKYVKSTLEDSVPFIRQANFEGLLAVWRP 295 >gi|15964138|ref|NP_384491.1| putative protease IV transmembrane protein [Sinorhizobium meliloti 1021] gi|307301283|ref|ZP_07581045.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti BL225C] gi|307317954|ref|ZP_07597391.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti AK83] gi|15073314|emb|CAC41822.1| Putative protease IV transmembrane protein [Sinorhizobium meliloti 1021] gi|306896356|gb|EFN27105.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti AK83] gi|306903739|gb|EFN34326.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti BL225C] Length = 319 Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 127/272 (46%), Positives = 180/272 (66%), Gaps = 5/272 (1%) Query: 20 LTVVYFS-WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 L + FS W E HVAR+A+ G I+D +EL+ER+ERI+ + S ALIV++SSPGG Sbjct: 32 LALFAFSGWGDVTERARDHVARVAVTGLIQDDRELVERLERIADNQSVKALIVTISSPGG 91 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + Y GE I++AI+KV +KPV+++V +AASAGYLI+ A + IVA ETS+ GSIGV+FQY Sbjct: 92 TTYGGEVIYKAIRKVAEKKPVVSDVRTLAASAGYLIALAGDRIVAGETSITGSIGVIFQY 151 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P VK +DKLGVS++S+KS P+KAEPSPF + +A M+Q ++D SY WFV LV+E R Sbjct: 152 PQVKTLMDKLGVSLESIKSRPLKAEPSPFHPPSDEARAMIQAMIDDSYGWFVDLVAERRK 211 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +P + L L+DGRI+TG +A + L+D +GG +E+ L V + + + DW P Sbjct: 212 LPRPEALALADGRIFTGRQALEGKLVDELGGDDEIRAFLAERKVSKDL-PVLDWEAPSGT 270 Query: 259 WFCDLKNL---SISSLLEDTIPLMKQTKVQGL 287 L +L S+ +L + P MK + GL Sbjct: 271 LSFGLGSLLAESVKALGYEAFPTMKSLEKTGL 302 >gi|150395248|ref|YP_001325715.1| signal peptide peptidase SppA, 36K type [Sinorhizobium medicae WSM419] gi|150026763|gb|ABR58880.1| signal peptide peptidase SppA, 36K type [Sinorhizobium medicae WSM419] Length = 319 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 125/272 (45%), Positives = 181/272 (66%), Gaps = 5/272 (1%) Query: 20 LTVVYFS-WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 L + FS W E HVAR+A+ G I+D +EL+ER+ERI+ + S ALIV++SSPGG Sbjct: 32 LALFAFSGWGDVTERARDHVARVAVTGLIQDDRELVERLERIAENQSVKALIVTISSPGG 91 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + Y GE I++A++KV +KPV+++V +AASAGYLI+ A + IVA ETS+ GSIGV+FQY Sbjct: 92 TTYGGEVIYKAVRKVAAKKPVVSDVRTLAASAGYLIALAGDRIVAGETSITGSIGVIFQY 151 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P VK +DKLGVS++S+KS P+KAEPSPF + +A M+Q ++D SY WFV LV+E R Sbjct: 152 PQVKTLMDKLGVSLESIKSRPLKAEPSPFHPPSDEARAMIQAMIDDSYGWFVDLVAERRK 211 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +P + L L+DGRI+TG +A + L+D +GG +E+ L V + + + DW P + Sbjct: 212 LPRAEALGLADGRIFTGRQALEGKLVDELGGDDEIRAFLAERKVSKDL-PVLDWEAPSST 270 Query: 259 WFCDLKNL---SISSLLEDTIPLMKQTKVQGL 287 L +L ++ +L + P MK + GL Sbjct: 271 LSFGLGSLLAEAVKALGYEAFPAMKGLEKTGL 302 >gi|227820608|ref|YP_002824578.1| signal peptide peptidase S49, SppA [Sinorhizobium fredii NGR234] gi|227339607|gb|ACP23825.1| signal peptide peptidase S49, SppA [Sinorhizobium fredii NGR234] Length = 319 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 128/296 (43%), Positives = 191/296 (64%), Gaps = 15/296 (5%) Query: 10 TRYVMLSLVTLTVVYFS-WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 T +L L ++ FS W+ E HVAR+ + G I+D +EL+ER+ERI+ + SA A Sbjct: 22 TAAAILVLGGFALIAFSGWTEVSERAREHVARVTVSGVIQDDRELVERLERIADNKSAKA 81 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 LIV++SSPGG+ Y GE +++AI+KV +KPV+++V +AASAGY+I+ A + IVA ETS+ Sbjct: 82 LIVTISSPGGTTYGGEVLYKAIRKVAAKKPVVSDVRTLAASAGYMIALAGDRIVAGETSI 141 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP VK +DK+GVS++S+KS P+KAEPSPF +P+A M+Q ++D SY+W Sbjct: 142 TGSIGVIFQYPQVKQLMDKVGVSLESIKSRPLKAEPSPFHPPSPEARAMIQTMIDDSYNW 201 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV+E R +P + L L+DGRI+TG +A + L+D +GG +E+ L V + + Sbjct: 202 FVDLVAERRKLPRPEALALADGRIFTGRQALQGKLVDTIGGDDEIRAFLADRKVSKDL-P 260 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLE----DTIPLMKQTK--------VQGLWAVWN 292 + DW P + L + +S+ L+ D P M + + GL +VW Sbjct: 261 VVDWEAPGGSFPFGLSTV-VSNWLKLLGYDAFPAMNGLEKIGGDKLFLDGLVSVWQ 315 >gi|209547656|ref|YP_002279573.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533412|gb|ACI53347.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 316 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 111/253 (43%), Positives = 175/253 (69%), Gaps = 3/253 (1%) Query: 11 RYVMLSL-VTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++L V L + ++S++ + PH+A + I G I D EL+ER++++ D A Sbjct: 20 RIVAVALIVALGLAFYSFAFGNAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQVKA 79 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ Sbjct: 80 AVISISSPGGTTYGGEKIFKAIRAIAAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSI 139 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 140 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 199 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV++ R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L + GVD + Sbjct: 200 FVDLVADRRKLPRDEVLKLADGTIYTGRQALKVKLVDTIGGEPEIRAYLKSRGVDADLPM 259 Query: 249 IKDWNPPKNYWFC 261 + DW+ N F Sbjct: 260 V-DWDKKSNTPFL 271 >gi|116250187|ref|YP_766025.1| peptidase [Rhizobium leguminosarum bv. viciae 3841] gi|115254835|emb|CAK05909.1| putative peptidase [Rhizobium leguminosarum bv. viciae 3841] Length = 327 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 107/246 (43%), Positives = 168/246 (68%), Gaps = 2/246 (0%) Query: 17 LVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS 75 +V L ++ ++ PH+A + I G I D EL+ER++++ D A ++S+SS Sbjct: 38 IVALGFAFYRFALGDAGTQRPHIAHVTISGLIVDDDELLERLKKVETSDQVKAAVISISS 97 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ GSIGV+ Sbjct: 98 PGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSITGSIGVI 157 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+WFV LV++ Sbjct: 158 FQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKTMIRNMVVDSYNWFVDLVAD 217 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L + GVD + + DW+ Sbjct: 218 RRKLPRDEVLKLADGTIYTGRQALKVKLVDAIGGEAEIRAYLTSRGVDSDLPMV-DWDKK 276 Query: 256 KNYWFC 261 N F Sbjct: 277 SNTPFL 282 >gi|241202814|ref|YP_002973910.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856704|gb|ACS54371.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 316 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 107/246 (43%), Positives = 169/246 (68%), Gaps = 2/246 (0%) Query: 17 LVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS 75 +V L ++ ++ PH+A + I G I D EL+ER++++ D A+++S+SS Sbjct: 27 IVALGFAFYRFALGDAGTERPHIAHVTISGLIVDDDELLERLKKVEISDQVKAVVISISS 86 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ GSIGV+ Sbjct: 87 PGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSITGSIGVI 146 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+WFV LV++ Sbjct: 147 FQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNWFVDLVAD 206 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L + GVD + + DW+ Sbjct: 207 RRKLPRDEVLKLADGTIYTGRQALKVKLVDAIGGEAEIRAYLTSRGVDSDLPMV-DWDKK 265 Query: 256 KNYWFC 261 N F Sbjct: 266 SNTPFL 271 >gi|15887687|ref|NP_353368.1| proteinase IV [Agrobacterium tumefaciens str. C58] gi|15155244|gb|AAK86153.1| proteinase IV [Agrobacterium tumefaciens str. C58] Length = 317 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 121/290 (41%), Positives = 182/290 (62%), Gaps = 11/290 (3%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 ++L + + F W + PH+ARI + G I D+ EL+ER+++I++ D+ LIVS Sbjct: 25 LLLVVGAFGLYRFFWQGPQQSAKPHIARIEVSGLITDNTELLERLDKIAKSDNVKGLIVS 84 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SSPGG+ Y GE IF+ I+ V +KPV+++V +AASAGY+I+ A ++IVA ETS+ GSI Sbjct: 85 ISSPGGTTYGGERIFKVIRSVAEKKPVVSDVRTLAASAGYMIASAGDVIVAGETSITGSI 144 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+FQYP + ++KLGVS++ +KSSPMKAEPSPF E +A M++ +V SY WFV L Sbjct: 145 GVIFQYPQLGQLMEKLGVSLQEIKSSPMKAEPSPFHEAPEEAKTMIRAMVMDSYGWFVDL 204 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++ R +P ++ L L+DG I+TG +A L+D +GG++EV GV + + I +W Sbjct: 205 VADRRKLPREEVLKLADGSIFTGRQALANKLVDTLGGEKEVRAYFETRGVAKDL-PIVEW 263 Query: 253 NPP-KNYWFCDLKNLSISSLL--EDTIPLMKQTK-------VQGLWAVWN 292 P N F I+ LL +D IP ++ + GL +VW Sbjct: 264 RAPSSNSPFALFSVAQIAKLLGYDDLIPFAGPSQLGADKLFLDGLVSVWQ 313 >gi|190890072|ref|YP_001976614.1| proteinase IV protein [Rhizobium etli CIAT 652] gi|190695351|gb|ACE89436.1| proteinase IV protein [Rhizobium etli CIAT 652] Length = 316 Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 109/253 (43%), Positives = 173/253 (68%), Gaps = 3/253 (1%) Query: 11 RYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D A Sbjct: 20 RIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQVKA 79 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ + GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ Sbjct: 80 AVISISSPGGTTFGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSI 139 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 140 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 199 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV++ R +P D+ L L+DG I+TG +A K+ LID +GG+ E+ L + GVD + Sbjct: 200 FVDLVADRRKLPRDEVLKLADGTIYTGRQALKMKLIDTIGGEPEIRAYLKSRGVDTDLPM 259 Query: 249 IKDWNPPKNYWFC 261 + DW+ N F Sbjct: 260 V-DWDKKSNTPFL 271 >gi|218458242|ref|ZP_03498333.1| signal peptide peptidase SppA, 36K type [Rhizobium etli Kim 5] Length = 269 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 172/253 (67%), Gaps = 3/253 (1%) Query: 11 RYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D A Sbjct: 1 RIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQVKA 60 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+++ A + I+A ++S+ Sbjct: 61 AVISISSPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMVATAGDTIIAGDSSI 120 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 121 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 180 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV++ R +P ++ L L+DG I+TG +A + LID +GG+ E+ L + GVD + Sbjct: 181 FVDLVADRRKLPREEALKLADGTIFTGRQALQAKLIDTIGGEPEIRAYLKSRGVDADLPM 240 Query: 249 IKDWNPPKNYWFC 261 + DW+ N F Sbjct: 241 V-DWDKKSNTPFL 252 >gi|325291771|ref|YP_004277635.1| protease IV [Agrobacterium sp. H13-3] gi|325059624|gb|ADY63315.1| putative protease IV [Agrobacterium sp. H13-3] Length = 317 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 106/222 (47%), Positives = 158/222 (71%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 F W++ + PH+AR+ I G I+D+ EL+ER+++I++ D+ LIVS+SSPGG+ Y GE Sbjct: 37 FLWATPQQSERPHIARVQISGLIQDNTELLERLDKIAKSDNVKGLIVSISSPGGTTYGGE 96 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 IF+AI+ V +KPV+++V +AASAGY+I+ A ++IVA ETS+ GSIGV+FQYP + Sbjct: 97 RIFKAIRGVAEKKPVVSDVRTLAASAGYMIASAGDVIVAGETSITGSIGVIFQYPQIGQL 156 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +DKLGVS++ +KSSPMKAEPSPF E +A M++ +V SY WFV LV++ R +P + Sbjct: 157 MDKLGVSLQEIKSSPMKAEPSPFHEAPEEAKTMIRSMVMDSYGWFVDLVADRRKLPREDV 216 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 L L+DG I+TG +A L+D +GG++E+ GV + + Sbjct: 217 LKLADGSIFTGRQALANKLVDTLGGEKEIRGYFETRGVAKDL 258 >gi|327193444|gb|EGE60342.1| proteinase IV protein [Rhizobium etli CNPAF512] Length = 316 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 173/253 (68%), Gaps = 3/253 (1%) Query: 11 RYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D A Sbjct: 20 RIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQVKA 79 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ + GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ Sbjct: 80 AVISISSPGGTTFGGEKIFKAIRAIAAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSI 139 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 140 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 199 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV++ R +P D+ L L+DG I+TG +A K+ L+D +GG+ E+ L + GV+ + Sbjct: 200 FVDLVADRRKLPRDEVLKLADGTIYTGRQALKMKLVDTIGGEPEIRAYLKSRGVNTDLPM 259 Query: 249 IKDWNPPKNYWFC 261 + DW+ N F Sbjct: 260 V-DWDKKSNTPFL 271 >gi|86356057|ref|YP_467949.1| proteinase IV protein [Rhizobium etli CFN 42] gi|86280159|gb|ABC89222.1| proteinase IV protein [Rhizobium etli CFN 42] Length = 316 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 108/253 (42%), Positives = 171/253 (67%), Gaps = 3/253 (1%) Query: 11 RYVMLSL-VTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++L V L ++ ++ SPH+A + I G I D EL+ER++++ + A Sbjct: 20 RIVAVALIVALGFAFYRFALGEAGTASPHIAHVTISGLIVDDDELLERLKKVETSNQVKA 79 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ Y GE IF AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ Sbjct: 80 AVISISSPGGTTYGGEKIFNAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSI 139 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 140 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 199 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV+E R +P ++ L L+DG I+TG +A + L+D +GG+ E+ L + GVD + Sbjct: 200 FVDLVAERRKLPREEVLKLADGTIYTGRQALQAKLVDTIGGEAEIRAYLQSRGVDADLPM 259 Query: 249 IKDWNPPKNYWFC 261 + DW+ N F Sbjct: 260 V-DWDKKSNTPFL 271 >gi|222084667|ref|YP_002543196.1| proteinase IV protein [Agrobacterium radiobacter K84] gi|221722115|gb|ACM25271.1| proteinase IV protein [Agrobacterium radiobacter K84] Length = 318 Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 113/241 (46%), Positives = 167/241 (69%), Gaps = 3/241 (1%) Query: 14 MLSLVTLT-VVYFSWSSHVEDN-SPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 +L LV L +Y +++ + D P +AR+AI G I+D EL+ER+++I +D ALIV Sbjct: 24 VLLLVGLGFALYRFFAADLPDTRGPQIARVAISGLIQDDSELLERLKKIKDNDQVKALIV 83 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 S+SS GG+ Y GE IF+AI+ V +KPV++++ +AASAGY+I+ A + IVA +TS+ GS Sbjct: 84 SISSTGGTTYGGERIFKAIRAVAAKKPVVSDIRTVAASAGYMIATAGDDIVAGDTSITGS 143 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+FQYP K LDKLGVS++ +KSSPMKAEPSPF + A M++++V SY WFV Sbjct: 144 IGVIFQYPQAKDLLDKLGVSLEDIKSSPMKAEPSPFHPPSEDAKNMIRNMVMDSYGWFVD 203 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 LV++ R +P ++ L L+DG I+TG +A + LID +GG++E+ L V++ + I D Sbjct: 204 LVADRRKLPREEVLKLADGSIFTGRQALQNKLIDTLGGEDEIRAYLDTRKVNKDL-PIVD 262 Query: 252 W 252 W Sbjct: 263 W 263 >gi|153007511|ref|YP_001368726.1| signal peptide peptidase SppA [Ochrobactrum anthropi ATCC 49188] gi|151559399|gb|ABS12897.1| signal peptide peptidase SppA, 36K type [Ochrobactrum anthropi ATCC 49188] Length = 323 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 192/291 (65%), Gaps = 13/291 (4%) Query: 14 MLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +L + L V+ SWS + N PH+A++ I G I +++EL++R+++I++DD+ +I+ Sbjct: 26 LLLIAALIAVFASWSMRGTNFNQPHIAKVRIEGTIFENEELLKRLDKIAKDDAVKGVILV 85 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 L SPGG+ GEAIF A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSI Sbjct: 86 LDSPGGTTVGGEAIFEAVRKIAEKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSI 145 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVLFQYP V LD +GV ++++KSSP+KAEP+ FS + +A M+++++ SY WFV + Sbjct: 146 GVLFQYPDVSKLLDTIGVKVETIKSSPLKAEPNYFSPASEEAKGMIRNMIMDSYAWFVDI 205 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V + R+ +++ L L++G ++TG +A LID +GG+EE L + G+ + + ++ +W Sbjct: 206 VEKRRSFTHEQALALANGAVFTGRQALDKKLIDGLGGEEEAVAWLASKGLSKDLPRL-EW 264 Query: 253 NPPKNYWFCDLKNLSISS---LL---EDTIPLMKQTK-----VQGLWAVWN 292 P + L++L I + LL ++ ++KQ + GL +VW+ Sbjct: 265 KPVSSETGFSLRDLIIHAGARLLRVPQEADGMLKQIAKERIFLDGLLSVWH 315 >gi|239831003|ref|ZP_04679332.1| signal peptide peptidase SppA, 36K type [Ochrobactrum intermedium LMG 3301] gi|239823270|gb|EEQ94838.1| signal peptide peptidase SppA, 36K type [Ochrobactrum intermedium LMG 3301] Length = 323 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 104/258 (40%), Positives = 174/258 (67%), Gaps = 2/258 (0%) Query: 14 MLSLVTLTVVYFSWSSHVEDNS-PHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +L + L + SWS + S PH+A++ I G I +++EL++R+++I+RDD+ +I+ Sbjct: 26 LLLIAALIAGFASWSMRGTNFSQPHIAKVRIEGTIFENEELLKRLDKIARDDAVKGVILV 85 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 L SPGG+ GEAIF A++K+ +KPV+T+V +AASAGY+I+ AS+ I+A +TS+VGSI Sbjct: 86 LDSPGGTTVGGEAIFEAVRKIAAKKPVVTQVGTLAASAGYMIASASDHIIARQTSIVGSI 145 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVLFQYP + LD +GV ++++KSSP+KAEP+ FS + +A M+ +++ SY WFV + Sbjct: 146 GVLFQYPDLSKLLDTIGVKVETIKSSPLKAEPNYFSPASDEAKGMISNMIMDSYAWFVDI 205 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V + R+ +++ L L++G ++TG +A LID +GG+EE L G+ + + ++ +W Sbjct: 206 VEKRRSFTHEQALALANGAVFTGRQALDKKLIDGLGGEEEAVAWLAGKGLSKDLPRL-EW 264 Query: 253 NPPKNYWFCDLKNLSISS 270 P + L++L I + Sbjct: 265 KPVNDDTGFSLRDLIIHA 282 >gi|306842559|ref|ZP_07475210.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO2] gi|306287415|gb|EFM58895.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO2] Length = 327 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 101/237 (42%), Positives = 163/237 (68%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R++RI+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDRIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++D++ SY WFV +V E R+ +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRDMIMDSYDWFVGIVQERRSFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPAGSETGFSLRDLIIHA 282 >gi|17988076|ref|NP_540710.1| putative protease IV [Brucella melitensis bv. 1 str. 16M] gi|17983826|gb|AAL52974.1| putative protease iv [Brucella melitensis bv. 1 str. 16M] Length = 301 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 103/258 (39%), Positives = 171/258 (66%), Gaps = 2/258 (0%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 ++L+ + ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ Sbjct: 1 MLLAALIAGFAFYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILL 59 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 L SPGG+ GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSI Sbjct: 60 LDSPGGTTVGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSI 119 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVLFQYP + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV + Sbjct: 120 GVLFQYPDLSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGI 179 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V E R +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W Sbjct: 180 VQERRAFTHEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EW 238 Query: 253 NPPKNYWFCDLKNLSISS 270 P + L++L I + Sbjct: 239 KPVGSETGFSLRDLIIHA 256 >gi|326537889|gb|ADZ86104.1| signal peptide peptidase SppA, 36K type [Brucella melitensis M5-90] Length = 331 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 166/247 (67%), Gaps = 2/247 (0%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ G Sbjct: 42 FYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGG 100 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 EAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + Sbjct: 101 EAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSK 160 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ Sbjct: 161 LLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQ 220 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + L Sbjct: 221 ALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSL 279 Query: 264 KNLSISS 270 ++L I + Sbjct: 280 RDLIIHA 286 >gi|256112659|ref|ZP_05453580.1| signal peptide peptidase SppA, 36K type [Brucella melitensis bv. 3 str. Ether] gi|265994099|ref|ZP_06106656.1| signal peptide peptidase SppA [Brucella melitensis bv. 3 str. Ether] gi|262765080|gb|EEZ11001.1| signal peptide peptidase SppA [Brucella melitensis bv. 3 str. Ether] Length = 327 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 166/247 (67%), Gaps = 2/247 (0%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ G Sbjct: 38 FYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGG 96 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 EAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + Sbjct: 97 EAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSK 156 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ Sbjct: 157 LLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQ 216 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + L Sbjct: 217 ALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSL 275 Query: 264 KNLSISS 270 ++L I + Sbjct: 276 RDLIIHA 282 >gi|225851687|ref|YP_002731920.1| signal peptide peptidase SppA, 36K type [Brucella melitensis ATCC 23457] gi|256045946|ref|ZP_05448818.1| signal peptide peptidase SppA, 36K type [Brucella melitensis bv. 1 str. Rev.1] gi|256264800|ref|ZP_05467332.1| clp protease [Brucella melitensis bv. 2 str. 63/9] gi|260563227|ref|ZP_05833713.1| clp protease [Brucella melitensis bv. 1 str. 16M] gi|265992356|ref|ZP_06104913.1| signal peptide peptidase SppA [Brucella melitensis bv. 1 str. Rev.1] gi|225640052|gb|ACN99965.1| signal peptide peptidase SppA, 36K type [Brucella melitensis ATCC 23457] gi|260153243|gb|EEW88335.1| clp protease [Brucella melitensis bv. 1 str. 16M] gi|263003422|gb|EEZ15715.1| signal peptide peptidase SppA [Brucella melitensis bv. 1 str. Rev.1] gi|263095211|gb|EEZ18880.1| clp protease [Brucella melitensis bv. 2 str. 63/9] gi|326408176|gb|ADZ65241.1| signal peptide peptidase SppA, 36K type [Brucella melitensis M28] Length = 327 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 166/247 (67%), Gaps = 2/247 (0%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ G Sbjct: 38 FYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGG 96 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 EAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + Sbjct: 97 EAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSK 156 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ Sbjct: 157 LLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQ 216 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + L Sbjct: 217 ALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSL 275 Query: 264 KNLSISS 270 ++L I + Sbjct: 276 RDLIIHA 282 >gi|306844422|ref|ZP_07477012.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO1] gi|306275235|gb|EFM56985.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO1] Length = 327 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 162/237 (68%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R+ +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRGMIMDSYDWFVGIVQERRSFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIHA 282 >gi|256158851|ref|ZP_05456708.1| Clp protease [Brucella ceti M490/95/1] gi|256254232|ref|ZP_05459768.1| Clp protease [Brucella ceti B1/94] gi|261221381|ref|ZP_05935662.1| signal peptide peptidase SppA [Brucella ceti B1/94] gi|265997342|ref|ZP_06109899.1| signal peptide peptidase SppA [Brucella ceti M490/95/1] gi|260919965|gb|EEX86618.1| signal peptide peptidase SppA [Brucella ceti B1/94] gi|262551810|gb|EEZ07800.1| signal peptide peptidase SppA [Brucella ceti M490/95/1] Length = 327 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 ATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDSLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIHA 282 >gi|161618142|ref|YP_001592029.1| signal peptide peptidase SppA, 36K type [Brucella canis ATCC 23365] gi|254705333|ref|ZP_05167161.1| signal peptide peptidase SppA, 36K type [Brucella suis bv. 3 str. 686] gi|261756044|ref|ZP_05999753.1| signal peptide peptidase SppA [Brucella suis bv. 3 str. 686] gi|161334953|gb|ABX61258.1| signal peptide peptidase SppA, 36K type [Brucella canis ATCC 23365] gi|261745797|gb|EEY33723.1| signal peptide peptidase SppA [Brucella suis bv. 3 str. 686] Length = 327 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 ATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIHA 282 >gi|163842424|ref|YP_001626828.1| signal peptide peptidase SppA, 36K type [Brucella suis ATCC 23445] gi|189023406|ref|YP_001934174.1| Clp protease [Brucella abortus S19] gi|254690458|ref|ZP_05153712.1| signal peptide peptidase SppA [Brucella abortus bv. 6 str. 870] gi|254694947|ref|ZP_05156775.1| signal peptide peptidase SppA [Brucella abortus bv. 3 str. Tulya] gi|254696578|ref|ZP_05158406.1| signal peptide peptidase SppA [Brucella abortus bv. 2 str. 86/8/59] gi|254707153|ref|ZP_05168981.1| signal peptide peptidase SppA [Brucella pinnipedialis M163/99/10] gi|254709303|ref|ZP_05171114.1| signal peptide peptidase SppA [Brucella pinnipedialis B2/94] gi|254713274|ref|ZP_05175085.1| signal peptide peptidase SppA [Brucella ceti M644/93/1] gi|254716373|ref|ZP_05178184.1| signal peptide peptidase SppA [Brucella ceti M13/05/1] gi|254731491|ref|ZP_05190069.1| signal peptide peptidase SppA [Brucella abortus bv. 4 str. 292] gi|256030826|ref|ZP_05444440.1| signal peptide peptidase SppA [Brucella pinnipedialis M292/94/1] gi|256060296|ref|ZP_05450469.1| signal peptide peptidase SppA [Brucella neotomae 5K33] gi|256258714|ref|ZP_05464250.1| signal peptide peptidase SppA [Brucella abortus bv. 9 str. C68] gi|260169730|ref|ZP_05756541.1| signal peptide peptidase SppA [Brucella sp. F5/99] gi|260546428|ref|ZP_05822168.1| clp protease [Brucella abortus NCTC 8038] gi|260756010|ref|ZP_05868358.1| signal peptide peptidase SppA [Brucella abortus bv. 6 str. 870] gi|260759234|ref|ZP_05871582.1| signal peptide peptidase SppA [Brucella abortus bv. 4 str. 292] gi|260760956|ref|ZP_05873299.1| signal peptide peptidase SppA [Brucella abortus bv. 2 str. 86/8/59] gi|260885030|ref|ZP_05896644.1| signal peptide peptidase SppA [Brucella abortus bv. 9 str. C68] gi|261215286|ref|ZP_05929567.1| signal peptide peptidase SppA [Brucella abortus bv. 3 str. Tulya] gi|261218155|ref|ZP_05932436.1| signal peptide peptidase SppA [Brucella ceti M13/05/1] gi|261314631|ref|ZP_05953828.1| signal peptide peptidase SppA [Brucella pinnipedialis M163/99/10] gi|261316812|ref|ZP_05956009.1| signal peptide peptidase SppA [Brucella pinnipedialis B2/94] gi|261320997|ref|ZP_05960194.1| signal peptide peptidase SppA [Brucella ceti M644/93/1] gi|261324268|ref|ZP_05963465.1| signal peptide peptidase SppA [Brucella neotomae 5K33] gi|261759268|ref|ZP_06002977.1| clp protease [Brucella sp. F5/99] gi|265987881|ref|ZP_06100438.1| signal peptide peptidase SppA [Brucella pinnipedialis M292/94/1] gi|163673147|gb|ABY37258.1| signal peptide peptidase SppA, 36K type [Brucella suis ATCC 23445] gi|189018978|gb|ACD71700.1| Clp protease [Brucella abortus S19] gi|260096535|gb|EEW80411.1| clp protease [Brucella abortus NCTC 8038] gi|260669552|gb|EEX56492.1| signal peptide peptidase SppA [Brucella abortus bv. 4 str. 292] gi|260671388|gb|EEX58209.1| signal peptide peptidase SppA [Brucella abortus bv. 2 str. 86/8/59] gi|260676118|gb|EEX62939.1| signal peptide peptidase SppA [Brucella abortus bv. 6 str. 870] gi|260874558|gb|EEX81627.1| signal peptide peptidase SppA [Brucella abortus bv. 9 str. C68] gi|260916893|gb|EEX83754.1| signal peptide peptidase SppA [Brucella abortus bv. 3 str. Tulya] gi|260923244|gb|EEX89812.1| signal peptide peptidase SppA [Brucella ceti M13/05/1] gi|261293687|gb|EEX97183.1| signal peptide peptidase SppA [Brucella ceti M644/93/1] gi|261296035|gb|EEX99531.1| signal peptide peptidase SppA [Brucella pinnipedialis B2/94] gi|261300248|gb|EEY03745.1| signal peptide peptidase SppA [Brucella neotomae 5K33] gi|261303657|gb|EEY07154.1| signal peptide peptidase SppA [Brucella pinnipedialis M163/99/10] gi|261739252|gb|EEY27248.1| clp protease [Brucella sp. F5/99] gi|264660078|gb|EEZ30339.1| signal peptide peptidase SppA [Brucella pinnipedialis M292/94/1] Length = 327 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 ATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIHA 282 >gi|23501065|ref|NP_697192.1| signal peptide peptidase SppA [Brucella suis 1330] gi|62289130|ref|YP_220923.1| signal peptide peptidase SppA [Brucella abortus bv. 1 str. 9-941] gi|82699069|ref|YP_413643.1| Clp protease [Brucella melitensis biovar Abortus 2308] gi|148560143|ref|YP_001258187.1| signal peptide peptidase SppA [Brucella ovis ATCC 25840] gi|225626693|ref|ZP_03784732.1| signal peptide peptidase SppA, 36K type [Brucella ceti str. Cudo] gi|237814624|ref|ZP_04593622.1| signal peptide peptidase SppA, 36K type [Brucella abortus str. 2308 A] gi|256368618|ref|YP_003106124.1| signal peptide peptidase SppA [Brucella microti CCM 4915] gi|297247546|ref|ZP_06931264.1| protease IV [Brucella abortus bv. 5 str. B3196] gi|23346932|gb|AAN29107.1| signal peptide peptidase SppA [Brucella suis 1330] gi|62195262|gb|AAX73562.1| SppA, signal peptide peptidase SppA [Brucella abortus bv. 1 str. 9-941] gi|82615170|emb|CAJ10109.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Brucella melitensis biovar Abortus 2308] gi|148371400|gb|ABQ61379.1| signal peptide peptidase SppA [Brucella ovis ATCC 25840] gi|225618350|gb|EEH15393.1| signal peptide peptidase SppA, 36K type [Brucella ceti str. Cudo] gi|237789461|gb|EEP63671.1| signal peptide peptidase SppA, 36K type [Brucella abortus str. 2308 A] gi|255998776|gb|ACU47175.1| signal peptide peptidase SppA [Brucella microti CCM 4915] gi|297174715|gb|EFH34062.1| protease IV [Brucella abortus bv. 5 str. B3196] Length = 331 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 161/237 (67%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 51 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 111 ATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 171 TIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 230 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 231 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIHA 286 >gi|254700963|ref|ZP_05162791.1| signal peptide peptidase SppA [Brucella suis bv. 5 str. 513] gi|261751481|ref|ZP_05995190.1| signal peptide peptidase SppA [Brucella suis bv. 5 str. 513] gi|261741234|gb|EEY29160.1| signal peptide peptidase SppA [Brucella suis bv. 5 str. 513] Length = 327 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 ATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + + +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPHL-EWKPVGSETGFSLRDLIIHA 282 >gi|307942848|ref|ZP_07658193.1| proteinase IV protein [Roseibium sp. TrichSKD4] gi|307773644|gb|EFO32860.1| proteinase IV protein [Roseibium sp. TrichSKD4] Length = 335 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 146/223 (65%), Gaps = 1/223 (0%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 + ++L++L + Y S ++ H+ARI I G I D EL++RIERI D +IV+ Sbjct: 29 LAIALISL-IAYVSGAADASKKGSHIARIEIDGVITDDYELLQRIERIREHDPVKGVIVA 87 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGGS GEAI+ A++K+ KPV++E+ ASAGY+I+ A + +A S+ GSI Sbjct: 88 INSPGGSTTGGEAIYSALRKLAEDKPVVSEIRTEGASAGYMIAMAGDHTIARYNSITGSI 147 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVLFQY K LD +GV++ +VKSS +KAEP +SE +P+A M+ VV SY WFV L Sbjct: 148 GVLFQYGNFKGLLDTIGVNMDAVKSSDLKAEPDFYSEASPEAKAMLAKVVKDSYDWFVDL 207 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 V+E RN+ + L L+DG I++G A K+GLID +GG+E Q Sbjct: 208 VAERRNMDRNAALKLADGSIYSGYTAHKLGLIDAIGGEEVAIQ 250 >gi|319781468|ref|YP_004140944.1| signal peptide peptidase SppA, 36K type [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167356|gb|ADV10894.1| signal peptide peptidase SppA, 36K type [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 318 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 172/297 (57%), Gaps = 14/297 (4%) Query: 11 RYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R V + +V L V+ S + +D H+A++ I G I + +ELI+R+E I Sbjct: 22 RVVAIGIVALGVIALSTWFYGDDFGGSTVDHIAKVKIEGTITEDEELIKRLETIRLSSKV 81 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +I+S+ SPGG+ GE+I+ ++K+ KPV+ EV +AASAGY+I+ A++ IVA +T Sbjct: 82 KGVILSIDSPGGTTVGGESIYEEVRKLAADKPVVAEVGTLAASAGYMIASAADHIVARKT 141 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+VGSIGVL QYP V +DKLGV ++ VKSSP+KA PSPF N M++ ++ SY Sbjct: 142 SIVGSIGVLIQYPDVSGLMDKLGVKLEEVKSSPLKAAPSPFKPTNDDERAMVRKLILDSY 201 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV +V+E R + ++ LVL+DG I+TG + GLID VGG+ L GVD + Sbjct: 202 NWFVDIVAERRKMSREQALVLADGSIFTGRQGVANGLIDAVGGETVAIDWLATKGVDAKL 261 Query: 247 RKI--KDWNPPKNYWFCDLKNLSISSLL------EDTIPLMKQTK--VQGLWAVWNP 293 + + KD + F +I S L D I + + + GL +VW+P Sbjct: 262 KVVEWKDTERRGGFLFSKAMAQTIGSALGLPAYSSDVIHELGADRLFLDGLVSVWHP 318 >gi|260567208|ref|ZP_05837678.1| clp protease [Brucella suis bv. 4 str. 40] gi|260156726|gb|EEW91806.1| clp protease [Brucella suis bv. 4 str. 40] Length = 327 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 98/237 (41%), Positives = 160/237 (67%), Gaps = 1/237 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 ATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 TG +A LID +GG+ E L G+ + ++ +W + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKLVGSETGFSLRDLIIHA 282 >gi|304392326|ref|ZP_07374267.1| signal peptide peptidase A [Ahrensia sp. R2A130] gi|303295430|gb|EFL89789.1| signal peptide peptidase A [Ahrensia sp. R2A130] Length = 323 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 164/271 (60%), Gaps = 17/271 (6%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 H+AR++I G I+ + L+E +E+I +DDS ++++++SPGG+ GE IF A++KV + Sbjct: 54 HIARVSISGVIQQDRPLLEMLEKIEKDDSVKGVVLTINSPGGTTVGGEDIFNAVRKVAEK 113 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV V +AASAGY+I+ S+ IVA +S+VGSIGV+FQYP LDK+GVS++ VK Sbjct: 114 KPVAASVGTLAASAGYMIATGSDHIVARRSSIVGSIGVIFQYPQAHKLLDKIGVSLEEVK 173 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S+P+KAEPSPF P A+ ++++++D SY WFV LV++ R + + L L+DGRI +G Sbjct: 174 SAPLKAEPSPFHVPPPGAIAVIEELIDDSYQWFVDLVTDRRPLNRAEVLALADGRIMSGD 233 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK-----------NYWFCDLKN 265 + LID +G +E + + A ++ DWNP + W Sbjct: 234 RGVETKLIDAIGDEEAARKWITAKDGIADDLELVDWNPKRKEDSLFFRSQARAWVAQQLG 293 Query: 266 LSISSL----LEDTIPLMKQTKVQGLWAVWN 292 L ++L L+ IP K+ + GL ++W Sbjct: 294 LPAAALPDEALDRIIP--KRLFLDGLLSLWQ 322 >gi|110635996|ref|YP_676204.1| signal peptide peptidase A [Mesorhizobium sp. BNC1] gi|110286980|gb|ABG65039.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Chelativorans sp. BNC1] Length = 322 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 167/270 (61%), Gaps = 13/270 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 PH+A++ I G I + ++L++ +E + + +IV++ SPGG+ GEAI+ AI+++ Sbjct: 48 GPHIAQVRIEGTILEDKDLLDVLEDVRESSAVQGVIVTVDSPGGTTAGGEAIYEAIRQLA 107 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV+ +V +AASAGY+++ A++ IVA +TS+VGSIGV+ QYP V L KLGV ++ Sbjct: 108 EAKPVVAQVGTLAASAGYMVASAADHIVARQTSIVGSIGVIIQYPDVTDLLSKLGVKVEE 167 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KAEPSPF+ + QM+ +++ SY+WFV L+S+ R +P ++ + L+DG I+T Sbjct: 168 VKSSPLKAEPSPFNPTTDQERQMLAGMINDSYNWFVDLISQRRKLPRNEVVALADGSIFT 227 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN-----------YWFCDL 263 G +A + L+D +GG++E L G+ + + +W P + W + Sbjct: 228 GRQALERKLVDALGGEDEAQAWLVDQGLSAEL-NVVEWKPRSSSGSIFLPTSVAAWLANA 286 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L +++L D + M+ + GL ++W P Sbjct: 287 LGLPQATMLLDRLG-MEHIFLDGLLSLWQP 315 >gi|163757833|ref|ZP_02164922.1| proteinase IV protein [Hoeflea phototrophica DFL-43] gi|162285335|gb|EDQ35617.1| proteinase IV protein [Hoeflea phototrophica DFL-43] Length = 322 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 108/269 (40%), Positives = 164/269 (60%), Gaps = 10/269 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S H+ARI I G I D ++LI+ IE + ++A AL+V +SSPGG+ Y GE I++A+ + Sbjct: 45 GSDHIARIDISGVISDDEDLIDLIEDAASSETAKALVVRISSPGGTTYGGERIYKALLEA 104 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPV+ +V +AASAGY+I+ +S+ IVA E+S+VGSIGV+FQY + L+K+G+ I+ Sbjct: 105 GKSKPVVADVRTLAASAGYMIAASSDHIVAGESSIVGSIGVIFQYAQAQELLNKIGLRIE 164 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS+P+KAEPSPF + + +A M++ +V SY WFV LV+E R + L L+DG I+ Sbjct: 165 EIKSAPLKAEPSPFHDTSEEAKAMIRAMVLDSYDWFVDLVTERRGMTRADVLALADGSIF 224 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI---KDWNPPKNYWFCDLKNLSISS 270 TG +A GL+D +GG+ E+ L + V+ + I K +P + +L S Sbjct: 225 TGRQALGNGLVDAIGGEAEIRAYLESRDVEADLEIIEWEKQSDPARRLIGAQAVDLIASY 284 Query: 271 L-----LEDTIPLMKQTK--VQGLWAVWN 292 L D I + K + GL +VW Sbjct: 285 FGVPMRLSDEIDRLSGGKLFLDGLVSVWQ 313 >gi|13472792|ref|NP_104359.1| protease IV [Mesorhizobium loti MAFF303099] gi|14023539|dbj|BAB50145.1| protease IV [Mesorhizobium loti MAFF303099] Length = 318 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 111/297 (37%), Positives = 173/297 (58%), Gaps = 14/297 (4%) Query: 11 RYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R + +V L V+ S + +D H+A++ I G I + +ELI+R+E I + Sbjct: 22 RVAAIGIVALGVIALSAWFYRDDLGGSTVDHIAKVRIEGTITEDEELIKRLEDIRKSSKV 81 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +I+++ SPGG+ GE+I+ ++KV KPV+ EV +AASAGY+I+ A++ IVA +T Sbjct: 82 KGVILAIDSPGGTTVGGESIYEEVRKVAADKPVVAEVGTLAASAGYMIASAADHIVARKT 141 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+VGSIGVL QYP V +DKLG+ ++ VKSSP+KA PSPF N M++ ++ SY Sbjct: 142 SIVGSIGVLIQYPDVSGLMDKLGIKLEEVKSSPLKASPSPFKPTNDDERAMVRKLILDSY 201 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 WFV +V+E R + +++ L L+DG I+TG + GLID VGG+ E L GVD + Sbjct: 202 DWFVGIVAERRKMTHEQALALADGSIFTGRQGVTNGLIDAVGGETEAIDWLATKGVDAKL 261 Query: 247 RKI--KDWNPPKNYWFCDLKNLSISSLL------EDTIPLMKQTK--VQGLWAVWNP 293 + + KD ++ + ++ S L D I + + + GL +VW+P Sbjct: 262 KVVEWKDTERRGSFLWSKAMVKTVGSALGLPGYSSDVIHELGADRLFLDGLVSVWHP 318 >gi|254470780|ref|ZP_05084183.1| protease IV [Pseudovibrio sp. JE062] gi|211959922|gb|EEA95119.1| protease IV [Pseudovibrio sp. JE062] Length = 302 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 105/269 (39%), Positives = 164/269 (60%), Gaps = 14/269 (5%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 H+ARI I G I + +E +E I++DD+ +IVS++SPGG+ GEA++ A++K+ + Sbjct: 19 HIARIEISGPITYDRRQLEMLEAIAKDDTVQGVIVSINSPGGTTSGGEALYNALRKIAEK 78 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV + + ASA YL + AS+ +VA TSL GSIGVLFQY K LDK+GV + ++K Sbjct: 79 KPVTASITTLGASAAYLSAIASDHLVAQYTSLTGSIGVLFQYGNAKGLLDKIGVEMDAIK 138 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S+P+KAEP+ + P+ + +QD++D +Y WFV LV+E R + ++ L L++G+++TG Sbjct: 139 SAPLKAEPNFYEPATPEVKEALQDIIDDTYMWFVGLVAERRGLSQERALQLANGQVYTGH 198 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP---------PKN---YWFCDLK 264 +AK + LID +GG++ Q L S KI DW P P N + + + Sbjct: 199 QAKGLELIDEIGGEQAAHQWLIEKKGLSSDLKIIDWKPESDERTLPFPANLLGFLGSENQ 258 Query: 265 NLSISSLLEDTIPLMKQT-KVQGLWAVWN 292 NL I SLL+ ++ + + GL +VW Sbjct: 259 NL-IHSLLKTAKSVVDSSLPLDGLVSVWQ 286 >gi|218659745|ref|ZP_03515675.1| signal peptide peptidase SppA, 36K type [Rhizobium etli IE4771] Length = 254 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 87/200 (43%), Positives = 142/200 (71%), Gaps = 2/200 (1%) Query: 11 RYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D A Sbjct: 31 RIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQVKA 90 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+++ A + I+A ++S+ Sbjct: 91 AVISISSPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMVATAGDTIIAGDSSI 150 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 151 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 210 Query: 189 FVRLVSESRNIPYDKTLVLS 208 FV LV++ R +P ++ L L+ Sbjct: 211 FVDLVADRRKLPREEALKLA 230 >gi|260460501|ref|ZP_05808752.1| signal peptide peptidase SppA, 36K type [Mesorhizobium opportunistum WSM2075] gi|259033606|gb|EEW34866.1| signal peptide peptidase SppA, 36K type [Mesorhizobium opportunistum WSM2075] Length = 318 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 151/247 (61%), Gaps = 5/247 (2%) Query: 11 RYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R +V L V+ S + +D H+A++ I G I + ELI+R+E I + Sbjct: 22 RVAAFGIVALGVIALSAWLYGDDFGGATVDHIAKVRIEGTITEDDELIKRLETIRQSSKV 81 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +I+++ SPGG+ GE+I+ ++K+ KPV+ EV +AASAGY+I+ A++ IVA +T Sbjct: 82 KGVILAIDSPGGTTVGGESIYEEVRKLAADKPVVAEVGTLAASAGYMIASAADHIVARKT 141 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+VGSIGVL QYP V +DKLGV ++ VKSSP+KA PSPF N M++ ++ SY Sbjct: 142 SIVGSIGVLIQYPDVSGMMDKLGVKLEEVKSSPLKASPSPFKPTNDDERAMVRKLILDSY 201 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 WFV +V+E R + +++ L L+DG I+TG + GLID VGG+ L GVD + Sbjct: 202 DWFVGIVAERRKMSHEQALALADGSIFTGRQGVANGLIDAVGGETVAIDWLATKGVDAKL 261 Query: 247 RKIKDWN 253 K+ +W Sbjct: 262 -KVVEWK 267 >gi|254501657|ref|ZP_05113808.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] gi|222437728|gb|EEE44407.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] Length = 328 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 146/210 (69%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +VYF+ ++++ S H+ARI I G I ++++ +E +E+I + D+ +IVS++SPGGS Sbjct: 37 LVYFAGAANMSKRSAHIARIPIEGMILENRKTLEMLEKIGKSDAVKGVIVSINSPGGSTT 96 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 GEAI+ A++K+ +KP++ E+ + SAGYLI+ +++ IVA ++ GSIGVLFQ+ Sbjct: 97 GGEAIYNALRKLSEKKPIVAEMRTIGTSAGYLIAMSADHIVARYNTITGSIGVLFQFGNF 156 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L+ +GVS+++VKS+P+KAEP +S P+A M+Q +V SY+WFV +++E R++ Sbjct: 157 EKLLETVGVSMEAVKSAPLKAEPDFYSPATPEAKAMLQAMVTDSYNWFVDILAERRDLDK 216 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 K L L+DGR+ G A + L+D +GG+E Sbjct: 217 SKALELADGRVLLGQRALQEKLVDAIGGEE 246 >gi|265983331|ref|ZP_06096066.1| signal peptide peptidase SppA [Brucella sp. 83/13] gi|264661923|gb|EEZ32184.1| signal peptide peptidase SppA [Brucella sp. 83/13] Length = 239 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 86/185 (46%), Positives = 137/185 (74%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R++RI+ +D+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 51 NQPHIAKVRIEGTIFENEELLKRLDRIAGNDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 111 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 171 TIKSSPLKAEPNYFSPASEEAKNMIRGMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 230 Query: 214 TGAEA 218 TG +A Sbjct: 231 TGRQA 235 >gi|254718370|ref|ZP_05180181.1| signal peptide peptidase SppA, 36K type [Brucella sp. 83/13] gi|306839601|ref|ZP_07472405.1| signal peptide peptidase SppA, 36K type [Brucella sp. NF 2653] gi|306405299|gb|EFM61574.1| signal peptide peptidase SppA, 36K type [Brucella sp. NF 2653] Length = 235 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 86/185 (46%), Positives = 137/185 (74%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R++RI+ +D+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDRIAGNDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRGMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEA 218 TG +A Sbjct: 227 TGRQA 231 >gi|218677398|ref|ZP_03525295.1| signal peptide peptidase SppA, 36K type [Rhizobium etli CIAT 894] Length = 194 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 87/186 (46%), Positives = 132/186 (70%), Gaps = 11/186 (5%) Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ GSIGV Sbjct: 1 SPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSITGSIGV 60 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 +FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+WFV LV+ Sbjct: 61 IFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNWFVDLVA 120 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-----------ALGVD 243 + R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L LG Sbjct: 121 DRRKLPRDEVLKLADGTIYTGRQALKVKLVDTIGGEPEIRAYLKIARHRRRPADGGLGTK 180 Query: 244 QSIRKI 249 ++IR+ Sbjct: 181 RAIRRF 186 >gi|118593739|ref|ZP_01551108.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Stappia aggregata IAM 12614] gi|118433649|gb|EAV40312.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Stappia aggregata IAM 12614] Length = 328 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 151/225 (67%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 +I T V+ + + ++Y S S + + H+ARI I G I +S++ ++ I++I + D+ Sbjct: 22 RIATFVVIAAALIGGLLYVSGGSELSKRTAHIARIPIEGVILESRKTLQMIDKIGKSDAV 81 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++S++SPGGS GEA++ A++K+ +KPV+ E+ + SAGY+I+ AS+ IVA Sbjct: 82 KGVVISINSPGGSTTGGEALYEALRKLSEKKPVVAEIRTIGTSAGYMIALASDHIVARYN 141 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGVLFQ+ + ++ +GV + +VKS+P+KAEP +S+ +P+A M+Q +V++SY Sbjct: 142 SITGSIGVLFQFGNISKLMETVGVEMDAVKSAPLKAEPDFYSQTSPEARAMLQKLVNNSY 201 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 WFV LV+E R++ + L+DGRI TG +A L+D +GG++ Sbjct: 202 DWFVSLVAERRSLAPPRAKELADGRILTGHDALTEKLVDAIGGED 246 >gi|114706455|ref|ZP_01439357.1| protease IV [Fulvimarina pelagi HTCC2506] gi|114538316|gb|EAU41438.1| protease IV [Fulvimarina pelagi HTCC2506] Length = 312 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 90/263 (34%), Positives = 163/263 (61%), Gaps = 6/263 (2%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +AR++I G I + ++++E ++++ ++ A++V ++SPGG+ GEA++ A++++ Sbjct: 48 QIARVSIEGMITEDRKMLELLDKLKTEEEVLAVVVRINSPGGTTVGGEALYEAVREIAEV 107 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV EV +AASAGY+++ A++ IVA TS+VGSIGVLFQY LDK+GV + + K Sbjct: 108 KPVAAEVGTLAASAGYMVAAATDHIVARRTSIVGSIGVLFQYADASVLLDKIGVEVDARK 167 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPSPF P+A++M+ +++ +Y WF +V E R + + + D +++G Sbjct: 168 SSPIKAEPSPFGPAPPEALEMIDELIMDTYAWFRDIVGERRGLSRSELAAVDDASVFSGR 227 Query: 217 EAKKVGLIDVVGGQEEVWQSL-----YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + + L+D +GG+E + Q L G++ R+ +D + P ++ + L S Sbjct: 228 QGVERKLVDAIGGEEIIRQWLEDDRDIPKGLEFVEREPEDEDTPLSFLTESIAALGTSFG 287 Query: 272 LEDTIPL-MKQTKVQGLWAVWNP 293 L +IP+ ++ ++ GL ++W P Sbjct: 288 LSQSIPISVRSLELDGLVSLWQP 310 >gi|170748863|ref|YP_001755123.1| signal peptide peptidase SppA, 36K type [Methylobacterium radiotolerans JCM 2831] gi|170655385|gb|ACB24440.1| signal peptide peptidase SppA, 36K type [Methylobacterium radiotolerans JCM 2831] Length = 320 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 151/267 (56%), Gaps = 9/267 (3%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P +ARI++ G I S+ + ++R+ D+ +IVS++SPGG+ E IFR ++ + Sbjct: 52 PQIARISVSGFIAGSEATAKLMKRVGDSDAVKGVIVSINSPGGTTTGSEEIFRNLRALAA 111 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +KP++ V AAS Y+ + A++ IVA ETSLVGSIGVLFQYP LDK+GV ++SV Sbjct: 112 KKPIVAFVDGTAASGAYITAIAADHIVARETSLVGSIGVLFQYPDFSGLLDKVGVKVESV 171 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KSSP+KAEPS F+ +P+A + VV +Y WF LV+E R + + +SDGR+++G Sbjct: 172 KSSPLKAEPSGFTPTSPEARAALASVVGDTYAWFKGLVAERRGMDPAQLSTVSDGRVFSG 231 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF---------CDLKNL 266 ++ + L+D +GG+ + L + Q+ IKDW P F DL L Sbjct: 232 RQSVPLKLVDELGGERQAVAWLESARGVQANLPIKDWKPASESRFSLWSAAGIGADLLGL 291 Query: 267 SISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + + G+ A+W P Sbjct: 292 EGLAARLRAVGAEAEAARGGMLALWRP 318 >gi|170740731|ref|YP_001769386.1| signal peptide peptidase SppA, 36K type [Methylobacterium sp. 4-46] gi|168195005|gb|ACA16952.1| signal peptide peptidase SppA, 36K type [Methylobacterium sp. 4-46] Length = 321 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 160/269 (59%), Gaps = 14/269 (5%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +P +ARI + G I S + + ++R+ + + +IVS++SPGG+ E +FR ++++ Sbjct: 51 TPQIARITVDGFIAGSDKTRDLMKRVGDSSAVSGVIVSINSPGGTTTGSEELFRNLRQLA 110 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV+ V AAS Y+ + A++ IVA ETSLVGSIGVLFQYP + LDK+GV ++ Sbjct: 111 EKKPVVAFVDGTAASGAYITALAADHIVARETSLVGSIGVLFQYPDLSGLLDKVGVRVEE 170 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KAEPS F +P+A +Q +V +Y WF LV+E R + + +SDGR+++ Sbjct: 171 VKSSPLKAEPSGFHPTSPEARAALQAIVGDTYAWFKNLVAERRRMSEAELAAVSDGRVFS 230 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYWFCDLKNLSISSL 271 G + + L+D G ++ Q++ L ++ + K I+DW P + F DL + + Sbjct: 231 GRQGVALKLVDETGNEK---QAVAWLERERHVTKDLPIRDWKPRSDRSF-DLLSAASLLG 286 Query: 272 LEDTIPLMKQTKVQ-------GLWAVWNP 293 LED +++T + GL AVW P Sbjct: 287 LEDVAAGLRRTSGEAAALAQGGLLAVWRP 315 >gi|220922181|ref|YP_002497482.1| signal peptide peptidase SppA, 36K type [Methylobacterium nodulans ORS 2060] gi|219946787|gb|ACL57179.1| signal peptide peptidase SppA, 36K type [Methylobacterium nodulans ORS 2060] Length = 321 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 99/268 (36%), Positives = 157/268 (58%), Gaps = 12/268 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +P +ARI+I G I S++ E ++R+ + + +IVS++SPGG+ E +FR ++++ Sbjct: 51 TPQIARISIDGFIAGSEKTRELMKRVGDSSAVSGVIVSINSPGGTTTGSEELFRNLRQLA 110 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV+ V AAS Y+ + A++ IVA ETSLVGSIGVLFQYP + LDK+GV ++ Sbjct: 111 EKKPVVAFVDGTAASGAYITALAADHIVARETSLVGSIGVLFQYPDLSGLLDKVGVRVEQ 170 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KAEPS F +P+ +Q +V +Y WF LV+E R + + +SDGR+++ Sbjct: 171 VKSSPLKAEPSGFHPTSPEGRAALQAIVGDTYVWFKNLVAERRKLTPAELGAVSDGRVFS 230 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYWFCDLKNLSISSL 271 G + ++ L+D G + Q++ L ++ + K I+DW P + F S+ L Sbjct: 231 GRQGVELKLVDETGSER---QAVAWLERERKVAKDLPIRDWKPRSDRTFNLFSAASLLGL 287 Query: 272 LEDTIPLMKQTK------VQGLWAVWNP 293 E L + T+ GL A+W P Sbjct: 288 EEVAGRLRRTTEDAAALAQGGLLALWRP 315 >gi|328545804|ref|YP_004305913.1| Clp protease:peptidase U7:Signal peptide peptidase, SppA 36 kDa type [polymorphum gilvum SL003B-26A1] gi|326415544|gb|ADZ72607.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Polymorphum gilvum SL003B-26A1] Length = 334 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 129/198 (65%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S H+ARI I G I D ++ I I + + +IVS++SPGGS GEA++ A++ + Sbjct: 49 RSAHIARIEIEGVILDDRDQRRMIAGIGKSRAVQGVIVSINSPGGSTTGGEALYEALRDL 108 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KP++ E+ + SAGY+++ A++ +VA S+ GSIGVLFQ+ ++ LD LGV++ Sbjct: 109 AGKKPMVAEIRTLGTSAGYMVALAADHVVARHNSITGSIGVLFQFGNIERLLDTLGVAMD 168 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS P+KAEP +S+ +P A M++ +V SY WFVRLV+E R + ++DG I Sbjct: 169 AVKSGPLKAEPDFYSQASPDARAMLEALVGESYDWFVRLVAERRGLDETAARRVADGSIV 228 Query: 214 TGAEAKKVGLIDVVGGQE 231 TG AK+ GL+D +GG++ Sbjct: 229 TGFRAKESGLVDELGGEQ 246 >gi|68171775|ref|ZP_00545120.1| Peptidase S49, SppA [Ehrlichia chaffeensis str. Sapulpa] gi|88658399|ref|YP_507221.1| signal peptide peptidase SppA [Ehrlichia chaffeensis str. Arkansas] gi|67998800|gb|EAM85507.1| Peptidase S49, SppA [Ehrlichia chaffeensis str. Sapulpa] gi|88599856|gb|ABD45325.1| signal peptide peptidase SppA [Ehrlichia chaffeensis str. Arkansas] Length = 288 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 161/248 (64%), Gaps = 5/248 (2%) Query: 12 YVMLSLVTLTVVYFSWS--SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 + M+ ++ + V Y S S DN ++A++ I G+IE ++E+ +++I+ D+ T L Sbjct: 23 FFMIFVLLMLVNYIDISKISSFLDN-EYIAKVNIEGKIETNEEMDALLKKIAEDNHVTGL 81 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 I++++SPGGS E +++ I+ V KPV+ +++ AAS GY+ + A++ I+A T++ Sbjct: 82 ILNINSPGGSVTGSEILYQNIRNVSKNKPVVALLNDFAASGGYMTAIAADYIIARHTTIT 141 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGVL QY + P +K+G+S+KS+KSS +KAE SPF E+ + + ++ ++ +SY +F Sbjct: 142 GSIGVLMQYIGINPLAEKMGISLKSIKSSNLKAETSPFEELTEEKEESIRRIIKNSYDYF 201 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V +V++ R + D+ L +++G I+TG+EA +GL+D +GGQ+E ++ + S +K+ Sbjct: 202 VDIVADRRKMEKDQVLKIANGSIYTGSEALSIGLVDQIGGQDEAMNWFHSQNI--STQKV 259 Query: 250 KDWNPPKN 257 K + K+ Sbjct: 260 KVLSKKKH 267 >gi|57239342|ref|YP_180478.1| putative protease IV [Ehrlichia ruminantium str. Welgevonden] gi|58579308|ref|YP_197520.1| putative protease IV [Ehrlichia ruminantium str. Welgevonden] gi|57161421|emb|CAH58345.1| putative peptidase [Ehrlichia ruminantium str. Welgevonden] gi|58417934|emb|CAI27138.1| Putative Protease IV [Ehrlichia ruminantium str. Welgevonden] Length = 289 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 147/223 (65%), Gaps = 1/223 (0%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 V L L+ V S S+ DN ++A++ I G+IE ++E+ + +++I++D LI++ Sbjct: 27 VFLMLILSNYVDTSSVSNFLDN-EYIAKVNIEGKIETNEEMDKLLKKIAKDTHIKGLILN 85 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG+ E +++ I+ V KPV+ +++ AAS GY+ + A++ I+A T++ GSI Sbjct: 86 INSPGGAVTGSEILYQNIRNVSKYKPVVALLNDFAASGGYMTAIAADYIIARHTTITGSI 145 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL QY V KLG+++KS+KSS +KA SPF E+ + Q ++ +++ SY++FV + Sbjct: 146 GVLMQYFGVDQLAKKLGITLKSIKSSQLKAATSPFEELTQEKEQSVRHIINDSYNYFVDI 205 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 V+E R + ++ L ++DG I+TG+EA +GL+D +GG++E + Sbjct: 206 VAERRKMTKEQVLAIADGSIYTGSEALAIGLVDQIGGEDEALK 248 >gi|58617362|ref|YP_196561.1| putative protease IV [Ehrlichia ruminantium str. Gardel] gi|58416974|emb|CAI28087.1| Putative Protease IV [Ehrlichia ruminantium str. Gardel] Length = 289 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 150/226 (66%), Gaps = 3/226 (1%) Query: 12 YVMLSLVTLTVVYFSWSS--HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 ++M+ L+ + Y SS + DN ++A++ I G+IE ++E+ + +++I++D L Sbjct: 24 FLMVFLILILSNYVDTSSVSNFLDN-EYIAKVNIEGKIETNEEMDKLLKKIAKDTHIKGL 82 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 I++++SPGG+ E +++ I+ V KPV+ +++ AAS GY+ + A++ I+A T++ Sbjct: 83 ILNINSPGGAVTGSEILYQNIRNVSKYKPVVALLNDFAASGGYMTAIAADYIIARHTTIT 142 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGVL QY + KLG+++KS+KSS +KA SPF E+ + Q ++ +++ SY++F Sbjct: 143 GSIGVLMQYFGIDQLAKKLGITLKSIKSSELKAATSPFEELTQEKEQSVRHIINDSYNYF 202 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 V +V+E R + ++ L ++DG I+TG+EA +GL+D +GG++E + Sbjct: 203 VDIVAERRKMTKEQVLAIADGSIYTGSEALAIGLVDQIGGEDEALK 248 >gi|218528184|ref|YP_002419000.1| signal peptide peptidase SppA, 36K type [Methylobacterium chloromethanicum CM4] gi|218520487|gb|ACK81072.1| signal peptide peptidase SppA, 36K type [Methylobacterium chloromethanicum CM4] Length = 321 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 143/227 (62%), Gaps = 6/227 (2%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI+I G I S+ + IER+ ++ +++S+SSPGG+ E ++R ++ + + Sbjct: 54 QIARISIGGFIAGSESTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRALAAK 113 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++SVK Sbjct: 114 KPMVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVESVK 173 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR+++G Sbjct: 174 SSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDESQIAAVADGRVFSGR 233 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYWF 260 ++ + L+D +GG+ Q++ L ++ + + +KDW P + F Sbjct: 234 QSLPLKLVDELGGER---QAVAWLEKEKKVPEKLPVKDWKPKADGGF 277 >gi|114328685|ref|YP_745842.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] gi|114316859|gb|ABI62919.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] Length = 347 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 92/268 (34%), Positives = 154/268 (57%), Gaps = 6/268 (2%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 SH + PH+ RI I G I + L+E I + D S A+++ ++SPGG+ GEA+ Sbjct: 81 SHAVVSGPHLTRIRISGIITYDRPLLEAISHAADDSSVKAVLLEINSPGGTVAGGEALHD 140 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A+ ++ RKP++T + +AASAGY+I+ S I A + +L GSIGVL Q + L KL Sbjct: 141 ALAQLAARKPLVTTMESVAASAGYMIAAPSARIFARQATLTGSIGVLMQSAELSGLLGKL 200 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV ++ S PMK +PS + ++P+ QM+Q +V+ Y FV +V++ R++ + L+ Sbjct: 201 GVGSNTIVSGPMKDQPSLTAPLSPEGRQMLQGIVNDMYDQFVTMVAQGRHMTPEHVRALA 260 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEE--VWQSL-YALGVDQSIRKIKDWNPPKNYWFCDLKN 265 DGR +TG +A +GL+D +GG+ + VW + + D +R + + + + +WF Sbjct: 261 DGRPYTGRQALALGLVDQIGGEHDARVWLAKERHVPEDLPVRPLHESDGLRKHWFGGWLG 320 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWNP 293 S+ + +E L + + G WA+W P Sbjct: 321 -SLENFVESK--LSQGVSIDGAWALWQP 345 >gi|154250604|ref|YP_001411428.1| signal peptide peptidase SppA, 36K type [Parvibaculum lavamentivorans DS-1] gi|154154554|gb|ABS61771.1| signal peptide peptidase SppA, 36K type [Parvibaculum lavamentivorans DS-1] Length = 314 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 162/268 (60%), Gaps = 14/268 (5%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 H+AR+ I G I + E ++++ D S +I+S+ SPGG+ EA++ A++++ + Sbjct: 48 HIARVTIDGVIVHDRYQNEMFKKLAEDSSVRGVILSIDSPGGTTTGAEALYEAVRELAEK 107 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV+ + +AAS GY+ + +++ IV+ ++ GSIGV+FQ+ ++ L +GV ++ VK Sbjct: 108 KPVVAVLGTVAASGGYIAALSADHIVSRGNTITGSIGVVFQWAQLEKLLGNIGVEVREVK 167 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPSPF NP+A+++ ++++DSSY WF+RLV+ R + ++ DGR++TG Sbjct: 168 SSPLKAEPSPFHTTNPEALKVTRELIDSSYDWFLRLVTIRRGLDEATARMVGDGRVYTGW 227 Query: 217 EAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 +A + GL+D +GG++E L +D S+ ++D P Y + + + +L E Sbjct: 228 QAVENGLVDELGGEDEAIAWLAKEHKIDASL-PVRDRTPA--YPDLGMASFTGKALGEAA 284 Query: 276 IPLM-------KQTK---VQGLWAVWNP 293 + + +QTK + GL +VW P Sbjct: 285 VTAIDGLTGKTQQTKRLTLDGLTSVWQP 312 >gi|182679840|ref|YP_001833986.1| signal peptide peptidase SppA, 36K type [Beijerinckia indica subsp. indica ATCC 9039] gi|182635723|gb|ACB96497.1| signal peptide peptidase SppA, 36K type [Beijerinckia indica subsp. indica ATCC 9039] Length = 324 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 162/298 (54%), Gaps = 15/298 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 +I T ++L+ + ++ Y S H+AR++I G I ++ + I+R+ D SA Sbjct: 24 RIATMALVLAGIA-SLAYVSLGFRSGQQRAHIARLSISGLITGDRDTLRLIKRVE-DSSA 81 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A++VS+ SPGG+ E I+ A++++ +KP V MAAS GY+ + ++ IVA Sbjct: 82 QAVLVSIESPGGTTTGAERIYEALRRLSRKKPTAAVVGTMAASGGYIAALGTDQIVAQGN 141 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 SLVGSIGVLFQYP V LD LGV ++ VKSSP+KA P+ F P+A + +++ SY Sbjct: 142 SLVGSIGVLFQYPNVARLLDTLGVKVEEVKSSPLKASPNGFEPTTPEARAALVSLINDSY 201 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQS 245 WF LV E R + + +SDGR++TG + + L+D +GG++E L GV ++ Sbjct: 202 SWFKGLVKERRGMDDAQLANVSDGRVFTGRQGIPLHLVDRLGGEQEAIAWLEQQKGVGKN 261 Query: 246 IRKIKDWNPPKNYWFCDLKNL-----------SISSLLEDTIPLMKQTKVQGLWAVWN 292 + ++DW + + +L S++ +L P + GL ++W Sbjct: 262 L-PVRDWKHERGLGRWGIISLAAGLAEKLGLASLALVLNGESPFAGSPLLDGLVSIWQ 318 >gi|163849634|ref|YP_001637677.1| signal peptide peptidase SppA, 36K type [Methylobacterium extorquens PA1] gi|163661239|gb|ABY28606.1| signal peptide peptidase SppA, 36K type [Methylobacterium extorquens PA1] Length = 321 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 142/227 (62%), Gaps = 6/227 (2%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI+I G I S + IER+ ++ +++S+SSPGG+ E ++R ++ + + Sbjct: 54 QIARISIGGFIAGSDSTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRALAAK 113 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++SVK Sbjct: 114 KPMVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVESVK 173 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR+++G Sbjct: 174 SSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDESQIAAVADGRVFSGR 233 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYWF 260 ++ + L+D +GG+ Q++ L ++ + + +KDW P + F Sbjct: 234 QSLPLKLVDELGGER---QAVAWLEKEKKVPEKLPVKDWKPKADGGF 277 >gi|240136833|ref|YP_002961300.1| putative peptidase [Methylobacterium extorquens AM1] gi|254558708|ref|YP_003065803.1| peptidase [Methylobacterium extorquens DM4] gi|240006797|gb|ACS38023.1| putative peptidase [Methylobacterium extorquens AM1] gi|254265986|emb|CAX21736.1| putative peptidase [Methylobacterium extorquens DM4] Length = 321 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 87/227 (38%), Positives = 142/227 (62%), Gaps = 6/227 (2%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI+I G I S + IER+ ++ +++S+SSPGG+ E ++R ++ + + Sbjct: 54 QIARISIGGFIAGSDSTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRALAAK 113 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++SVK Sbjct: 114 KPMVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVESVK 173 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR+++G Sbjct: 174 SSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDESQIAAVADGRVFSGR 233 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYWF 260 ++ + L+D +GG+ Q++ L ++ + + +KDW P + F Sbjct: 234 QSLPLKLVDELGGER---QAVAWLEKEKKVPEKLPVKDWKPKADGGF 277 >gi|269958578|ref|YP_003328365.1| putative serine protease [Anaplasma centrale str. Israel] gi|269848407|gb|ACZ49051.1| putative serine protease [Anaplasma centrale str. Israel] Length = 293 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 141/222 (63%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSL 73 +L L+ V Y + N +VAR+ I G+I S+ + R++ DS AL++ + Sbjct: 30 LLLLIVGQVDYSRLVGTLRRNHDYVARVRISGEISRSRAREAMMARLAESDSVKALVLRI 89 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG+ EA+++ I+++ +KPV+ + +AAS GY+ + A++ +VA ++ GSIG Sbjct: 90 DSPGGTVGDSEALYQQIREIALKKPVVAVLGNIAASGGYMAAIAADHVVARHGTITGSIG 149 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ QY V KLG+++KS+K++P+K+ SP E++P+ ++Q VVD + +F LV Sbjct: 150 VISQYIGVAEVAGKLGITLKSIKTAPLKSNMSPLEELSPEGESIIQGVVDDFHVFFTDLV 209 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +E R + DK V+SDGRI+TGA+A +VGL+D +GG++E + Sbjct: 210 AERRGLAPDKVSVVSDGRIYTGAQALQVGLVDAIGGEKEALE 251 >gi|188579483|ref|YP_001922928.1| signal peptide peptidase SppA, 36K type [Methylobacterium populi BJ001] gi|179342981|gb|ACB78393.1| signal peptide peptidase SppA, 36K type [Methylobacterium populi BJ001] Length = 322 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 85/218 (38%), Positives = 136/218 (62%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI+I G I S+ + IER+ ++ +++S+SSPGG+ E ++R ++ + + Sbjct: 54 QIARISIGGFIAGSESTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRALAAK 113 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++SVK Sbjct: 114 KPIVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVESVK 173 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR+++G Sbjct: 174 SSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDDSQLSAVADGRVFSGR 233 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 ++ + L+D +GG+ + L + +KDW P Sbjct: 234 QSLPLKLVDELGGERQAVAWLEKERKVPANLPVKDWKP 271 >gi|312113690|ref|YP_004011286.1| signal peptide peptidase SppA, 36K type [Rhodomicrobium vannielii ATCC 17100] gi|311218819|gb|ADP70187.1| signal peptide peptidase SppA, 36K type [Rhodomicrobium vannielii ATCC 17100] Length = 328 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 90/268 (33%), Positives = 151/268 (56%), Gaps = 11/268 (4%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 H+AR+ I G I DS+ + +E++ +DD+ A+IV++ SPGG+ GEA++ ++++ N Sbjct: 55 HIARVTISGFIGDSKSRHDMLEKLRKDDNVKAVIVAVDSPGGTTTGGEALYEDLRELANA 114 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV MA SA YL A++ IVA ++ GS+GV+FQ+ V L K+GV + V+ Sbjct: 115 KPVAAVFGTMATSAAYLGGIATDYIVARGNTITGSVGVIFQWADVSELLSKVGVKVDEVR 174 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S +KA+PSPF+ V+ A + + +V S WFV LV+E R + GRI+TG Sbjct: 175 SGALKAKPSPFTPVDDAARALTEQLVKDSQGWFVGLVAERRKAAVSSLEDIKTGRIYTGR 234 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK-------NYWFCDLKNLSIS 269 +A +VGLID +G ++ + S K++DW P + L ++ Sbjct: 235 QAAQVGLIDAIGDEQVAIKWFTDARKVPSGLKVRDWKPGQSVSSLLSASMSSLALKLGVA 294 Query: 270 SLLE----DTIPLMKQTKVQGLWAVWNP 293 SL++ + + ++K + GL+++W+P Sbjct: 295 SLVDAAVLEGLDILKDRPLDGLFSIWHP 322 >gi|154246163|ref|YP_001417121.1| signal peptide peptidase SppA, 36K type [Xanthobacter autotrophicus Py2] gi|154160248|gb|ABS67464.1| signal peptide peptidase SppA, 36K type [Xanthobacter autotrophicus Py2] Length = 323 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/278 (32%), Positives = 159/278 (57%), Gaps = 18/278 (6%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 V +SPHVAR+ I G I + + +E +E I R A A+I+S+ SPGG+ E +F A+ Sbjct: 45 VSASSPHVARVTIGGIIRNDRARVELLEEIGRS-RARAVILSIDSPGGTVTGSEQLFDAL 103 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ +KPV+ V +AAS Y+ + ++ IVA +LVGS+GV++QYP V L +GV Sbjct: 104 RRLSEKKPVVAVVEGIAASGAYIAALGADHIVARRNALVGSVGVIYQYPNVTELLKTVGV 163 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ +KSSP+KA P+P++ P+A ++ +V SY WF LVSE R + DK ++DG Sbjct: 164 AMEDIKSSPLKASPNPYTPTTPEARAAVESLVKDSYAWFKGLVSERRKMSDDKLATVTDG 223 Query: 211 RIWTGAEAKKVGLIDVVGGQE--EVWQSLYALGVDQSIRKIKDWNP----PKNYWFCDLK 264 R++TG + + L+D +G + W + GV +++ K++ W + W Sbjct: 224 RVFTGHQGLDLQLVDELGDERTARAWLAREK-GVPENL-KVRSWRTREVDSEFGWLLGAA 281 Query: 265 NLSISS---------LLEDTIPLMKQTKVQGLWAVWNP 293 ++++ L + +++ ++ GL A+W+P Sbjct: 282 RGAVAALGFPQAAEFLTQTARGALERAQLDGLLALWHP 319 >gi|73667234|ref|YP_303250.1| signal peptide peptidase A [Ehrlichia canis str. Jake] gi|72394375|gb|AAZ68652.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Ehrlichia canis str. Jake] Length = 288 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 145/220 (65%), Gaps = 1/220 (0%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 V SL+ V S S+ DN ++A++ I G+IE S+E+ +++I++D LI++ Sbjct: 26 VFASLILCNYVDISKVSNFLDN-KYIAKVNIEGKIETSEEMDSLLKKIAKDSHVIGLILN 84 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG+ E +++ I+ + KPV+ ++++AAS GY+ + A++ I+A T++ GSI Sbjct: 85 INSPGGTITGSEILYQNIRNIAKNKPVVAVLNDLAASGGYMTAIAADYIIARHTTITGSI 144 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL QY V +K+G+S+KS+KSS +KA SPF E + + ++ +V+ SY++F+ + Sbjct: 145 GVLMQYFGVSSLAEKMGISLKSIKSSNLKAATSPFEEFTKEKEESIRRIVNESYNYFIDI 204 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V++ R + + L ++DG I+TG+EA +GL+D +GG++E Sbjct: 205 VADRRKMEKSQVLKIADGSIYTGSEALSIGLVDQIGGEDE 244 >gi|217976339|ref|YP_002360486.1| signal peptide peptidase SppA, 36K type [Methylocella silvestris BL2] gi|217501715|gb|ACK49124.1| signal peptide peptidase SppA, 36K type [Methylocella silvestris BL2] Length = 324 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/269 (33%), Positives = 150/269 (55%), Gaps = 12/269 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +PH+AR++I G I ++ ++ I RI D+A A++VS+ SPGG+ E ++ ++++ Sbjct: 52 APHIARLSISGLITGDRDTLKLISRIEESDAA-AVLVSIDSPGGTTAGAERLYDQLRRLS 110 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KP + V +AAS GY+ + ++ IVA SLVGSIGVL +YP V LD +GV +++ Sbjct: 111 AKKPTVAVVGSLAASGGYIAALGADQIVALGNSLVGSIGVLVEYPNVTKLLDTVGVKVEA 170 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KA P+ F +P+A + +VD S+ WF LV E RN+ + + DGR++T Sbjct: 171 VKSSPLKAAPNGFEPTSPEARAALASLVDDSFVWFKDLVRERRNLTAPQLAAVDDGRVFT 230 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS------- 267 G + + L+D +GG+ E L KI+DW ++ L + + Sbjct: 231 GRQGLGLHLVDRLGGEREAIAWLEQERAVPKGLKIRDWKQQGSFGRIGLFSFAARAASIF 290 Query: 268 ----ISSLLEDTIPLMKQTKVQGLWAVWN 292 +S LL + ++ + GL ++W Sbjct: 291 HLDELSRLLGRSSQFVEARMLDGLVSIWQ 319 >gi|91974675|ref|YP_567334.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB5] gi|91681131|gb|ABE37433.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rhodopseudomonas palustris BisB5] Length = 326 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/280 (34%), Positives = 163/280 (58%), Gaps = 27/280 (9%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +ARI I G I + E +E +ER+ + SA A+IV ++SPGG+ E ++ A+ ++ Sbjct: 50 TSSSIARIKIDGLIRSNSERVEALERLEKSQSA-AVIVHINSPGGTTAGSEELYNALMRL 108 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K +KP++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP V + +GV ++ Sbjct: 109 KAKKPMVVVVEGLAASGGYIAALASDHIIAQQSSLVGSIGVLFQYPNVSELMKTVGVKVE 168 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 VKSSP+KA P+ F +P+A ++ +V SY WF +V + R++ ++ V++DGR++ Sbjct: 169 EVKSSPLKAAPNGFEPTSPEARAALESLVRDSYAWFRDMVKQRRSMDDNQLGVVADGRVF 228 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDLKNLSI- 268 TG +A + LID +G ++ L ++ +KIK P +++ F DL L + Sbjct: 229 TGRQALGLKLIDELGDEKTAVAWL------ETEKKIKSGLPVRDFKLSPQFGDLAFLRVA 282 Query: 269 SSLLEDTIPL---------------MKQTKVQGLWAVWNP 293 +S+ D + L +++ + G+ A+W P Sbjct: 283 ASVTLDALGLGAIARQIEQSGAVQSVERLGLDGMLALWAP 322 >gi|86747765|ref|YP_484261.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris HaA2] gi|86570793|gb|ABD05350.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rhodopseudomonas palustris HaA2] Length = 321 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 163/276 (59%), Gaps = 23/276 (8%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +ARI I G I + E +E +ER+ + +SA A+IV ++SPGG+ E ++ A+ ++ Sbjct: 49 TSGSIARIKIDGLIRSNSERVEALERLEKSNSA-AVIVHINSPGGTTAGSEELYTALMRL 107 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K +KP++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP V + +GV ++ Sbjct: 108 KAKKPMVVVVEGLAASGGYIAALASDHIIAQQSSLVGSIGVLFQYPNVSELMKTVGVKVE 167 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 VKSSP+KA P+ F +P+A ++ +V SY WF LV + R + D+ +++DGR++ Sbjct: 168 EVKSSPLKAAPNGFEPTSPEARAALESLVRDSYAWFRDLVKQRRAMDDDQLGIVADGRVF 227 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDLKNL-SI 268 TG +A + LID +G ++ L ++ +++K P +++ F DL L + Sbjct: 228 TGRQAVGLKLIDQLGDEKTAVAWL------ETEKRVKSGLPVRDFKLSPQFGDLTFLRAA 281 Query: 269 SSLLEDTIPL---MKQTK--------VQGLWAVWNP 293 +S+ D + L +Q + + G+ A+W P Sbjct: 282 ASITLDALGLGVIARQVEQSGAMHLGLDGMLALWVP 317 >gi|146337268|ref|YP_001202316.1| S49 family peptidase [Bradyrhizobium sp. ORS278] gi|146190074|emb|CAL74066.1| Putative peptidase S49 family; putative signal peptide peptidase SppA [Bradyrhizobium sp. ORS278] Length = 326 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 160/282 (56%), Gaps = 31/282 (10%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +AR+ I G I QE +E +ER+ + SA A+IV ++SPGG+ E ++ ++ ++ Sbjct: 50 TSGSIARVNIEGLIRSDQERVEALERLE-NSSAEAVIVHINSPGGTTAGSEQLYDSLVRL 108 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K +KP++ V +AAS GY+ + AS+ IVA ++SLVGSIGVLFQYP V L +GV I+ Sbjct: 109 KAKKPLVVVVEGLAASGGYIGAIASDHIVAQQSSLVGSIGVLFQYPNVSELLKTVGVKIE 168 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV--LSDGR 211 VKSSP+KA P+ + +P+A + D+V SY WF LV RN+ D L+ ++DGR Sbjct: 169 EVKSSPLKAAPNGYEPTSPEARAALDDLVKDSYAWFRGLVKTRRNM--DDALLEKVADGR 226 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDLKNL- 266 ++TG +A ++ LID +G ++ L A + +K P ++Y F DL L Sbjct: 227 VFTGRQAVELKLIDELGDEKTAVAWLVA------NKNVKKDLPVRDYKLVPRFGDLTFLR 280 Query: 267 SISSLLEDTIPL---------------MKQTKVQGLWAVWNP 293 + +S+ D + L + + + G+ A+W P Sbjct: 281 TATSIALDAVGLSGIARQIERTGVVQAVDRVGLDGMLALWTP 322 >gi|323136115|ref|ZP_08071198.1| signal peptide peptidase SppA, 36K type [Methylocystis sp. ATCC 49242] gi|322399206|gb|EFY01725.1| signal peptide peptidase SppA, 36K type [Methylocystis sp. ATCC 49242] Length = 323 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 153/282 (54%), Gaps = 17/282 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 FS + +PH+AR++++G I ++ I+ I++I + A AL++++ SPGG+ E Sbjct: 40 FSDGDSADKLTPHIARLSLQGMITGDRDTIDLIKKIGDSNQARALLLTIESPGGTTTGSE 99 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ +++V +KPV+ V +AAS Y+ + A++ IVA SLVGSIGVLFQ+P Sbjct: 100 KLYEELRRVSEKKPVVAVVGTLAASGAYIAALAADEIVARGNSLVGSIGVLFQFPNFYKL 159 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD GV ++ VKSSP+KA P+ + + A + +V SY WF LV E RN+ ++ Sbjct: 160 LDSWGVKVEEVKSSPLKATPNGYEPTSEAAKAAIASLVSDSYAWFKNLVKERRNLSDEEL 219 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYWFC 261 +SDGR++T + + L+D +GG+ E ++ L +++I K ++DW + Sbjct: 220 AKVSDGRVFTARQGLPLKLVDKIGGERE---AVAWLETNKNIAKDLPVRDWKKKTSLERL 276 Query: 262 DLKNL-----------SISSLLEDTIPLMKQTKVQGLWAVWN 292 +L S + LE + + GL A+W Sbjct: 277 NLVESAAKMARAVGFDSFAGALEQVARAERGGSLDGLLAIWQ 318 >gi|209883626|ref|YP_002287483.1| protease IV [Oligotropha carboxidovorans OM5] gi|209871822|gb|ACI91618.1| protease IV [Oligotropha carboxidovorans OM5] Length = 326 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 166/310 (53%), Gaps = 31/310 (10%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 + I V+ +++ LT + S +AR+ I G I + E + +ER+ + + Sbjct: 22 RAISALVVIAAVIGLTAALAPSARQAITGSEAIARVKIEGLIRSNDERVAALERLGKSKA 81 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A A+IV ++SPGG+ E +F A+ ++K +KP++ V +AAS GY+ + AS+ I+A + Sbjct: 82 A-AVIVHINSPGGTTAGAEQLFDALTRLKAKKPLVVVVEGLAASGGYIAALASDHIIAQQ 140 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 TSLVGSIGVLFQ+P L +GV ++ VKS+P+KA P+ + +P+A + +V S Sbjct: 141 TSLVGSIGVLFQFPNFSELLKTVGVKVEEVKSAPLKAAPNGYEPTSPEARAALDALVKDS 200 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + WF LV R + V+SDGR++TG +A + LID +G ++ + L Q+ Sbjct: 201 FAWFKGLVKTRRQMDEAALQVVSDGRVFTGRQAVGLKLIDELGDEKTAVKWL------QA 254 Query: 246 IRKIKDWNPPKNY----WFCDLKNLSISSLLEDTIPLM------------------KQTK 283 KIK P ++Y F D+ L ++ E T+ + ++ + Sbjct: 255 QNKIKGELPVRDYKLSPRFSDMTFLRTAT--EATLRALGLETFARIVGGSGVGGVAERLE 312 Query: 284 VQGLWAVWNP 293 ++G+ A+W P Sbjct: 313 LEGMLALWQP 322 >gi|39933145|ref|NP_945421.1| signal peptide peptidase SppA 36K type [Rhodopseudomonas palustris CGA009] gi|192288501|ref|YP_001989106.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris TIE-1] gi|39652770|emb|CAE25509.1| putative protease IV [Rhodopseudomonas palustris CGA009] gi|192282250|gb|ACE98630.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris TIE-1] Length = 326 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 157/276 (56%), Gaps = 27/276 (9%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +ARI I G I + E ++ ++R+ + S +A+IV ++SPGG+ E + A+ ++K +K Sbjct: 54 IARIKIEGLIRSNDERVQALDRLGKS-SYSAVIVHINSPGGTTAGSEELHDALARLKAKK 112 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V +AAS GY+ + AS IVA +TSLVGSIGVLFQYP V L +GV ++ VKS Sbjct: 113 PMVVVVEGLAASGGYIAALASEHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKVEEVKS 172 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ F +P+A ++ +V SY WF +V +SR + D+ V++DGR++TG + Sbjct: 173 SPLKAAPNGFEPTSPEARAAIEALVKDSYAWFRGMVQQSRKMTDDQLNVVADGRVFTGRQ 232 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDLKNLS------ 267 A + LID +G + A+ + + +K P ++Y F DL L Sbjct: 233 AVGLKLIDELGDER------TAIAWLEKAKNVKAGLPVRDYKLAPQFGDLTFLRAAASVA 286 Query: 268 --------ISSLLEDTIPL--MKQTKVQGLWAVWNP 293 I+ +E T + +++ + G+ A+W P Sbjct: 287 FDAAGLGVIARRVEQTGAMQSVERLGLDGMLALWAP 322 >gi|254995186|ref|ZP_05277376.1| protease IV (sppA) [Anaplasma marginale str. Mississippi] gi|255003361|ref|ZP_05278325.1| protease IV (sppA) [Anaplasma marginale str. Puerto Rico] gi|255004484|ref|ZP_05279285.1| protease IV (sppA) [Anaplasma marginale str. Virginia] Length = 291 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 131/199 (65%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +VAR+ I G+I S+ + R++ DS AL++ + SPGG+ EA+++ I+++ + Sbjct: 51 YVARVRISGEIGRSRAREAMLARLAESDSVKALVLRIDSPGGTVGDSEALYQQIREIALK 110 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV+ + +AAS GY+ + A++ +VA ++ GSIGV+ QY V KLG+++KS+K Sbjct: 111 KPVVAVLGNVAASGGYMAAIAADHVVARHGTITGSIGVVSQYIGVAEAAGKLGIALKSIK 170 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 ++P+K+ SP E++P+ ++Q VVD + +FV LV+E R DK +SDGRI+TGA Sbjct: 171 TAPLKSNMSPLEELSPEGESIIQGVVDDFHVFFVGLVAERRGFTPDKVSAVSDGRIYTGA 230 Query: 217 EAKKVGLIDVVGGQEEVWQ 235 +A + GLID +GG++E + Sbjct: 231 QALQAGLIDAIGGEKEALE 249 >gi|56417009|ref|YP_154083.1| protease IV [Anaplasma marginale str. St. Maries] gi|222475377|ref|YP_002563794.1| protease IV (sppA) [Anaplasma marginale str. Florida] gi|56388241|gb|AAV86828.1| protease IV [Anaplasma marginale str. St. Maries] gi|222419515|gb|ACM49538.1| protease IV (sppA) [Anaplasma marginale str. Florida] Length = 293 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 131/199 (65%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +VAR+ I G+I S+ + R++ DS AL++ + SPGG+ EA+++ I+++ + Sbjct: 53 YVARVRISGEIGRSRAREAMLARLAESDSVKALVLRIDSPGGTVGDSEALYQQIREIALK 112 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV+ + +AAS GY+ + A++ +VA ++ GSIGV+ QY V KLG+++KS+K Sbjct: 113 KPVVAVLGNVAASGGYMAAIAADHVVARHGTITGSIGVVSQYIGVAEAAGKLGIALKSIK 172 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 ++P+K+ SP E++P+ ++Q VVD + +FV LV+E R DK +SDGRI+TGA Sbjct: 173 TAPLKSNMSPLEELSPEGESIIQGVVDDFHVFFVGLVAERRGFTPDKVSAVSDGRIYTGA 232 Query: 217 EAKKVGLIDVVGGQEEVWQ 235 +A + GLID +GG++E + Sbjct: 233 QALQAGLIDAIGGEKEALE 251 >gi|316931462|ref|YP_004106444.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris DX-1] gi|315599176|gb|ADU41711.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris DX-1] Length = 326 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/276 (33%), Positives = 159/276 (57%), Gaps = 27/276 (9%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +ARI I G I + + +E ++R+ + A A+IV ++SPGG+ E + A+ ++K +K Sbjct: 54 IARIKIEGLIRSNNDRVEALDRLGKSSYA-AVIVHINSPGGTTAGSEELHDALVRLKAKK 112 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V +AAS GY+ + AS I+A +TSLVGSIGVLFQYP + L +GV ++ VKS Sbjct: 113 PMVVVVEGLAASGGYIAALASEHIIAQQTSLVGSIGVLFQYPNLSELLKTVGVKVEEVKS 172 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ F +P+A ++ +V SY WF +V +SR + D+ V++DGR++TG + Sbjct: 173 SPLKAAPNGFEPTSPEARAAIESLVRDSYAWFRGMVQQSRKMTDDQLNVVADGRVFTGRQ 232 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDLKNL------- 266 A + LID +G ++ A+ ++ + +K P ++Y F DL L Sbjct: 233 AVGLKLIDQLGDEK------TAIAWLETAKNVKSGLPVRDYKLAPQFGDLTFLRAAASIA 286 Query: 267 -------SISSLLEDTIPL--MKQTKVQGLWAVWNP 293 +++ +E T + +++ + G+ A+W P Sbjct: 287 FDAAGLSAVARRVEQTGAMQSVERLGLDGMLALWAP 322 >gi|158425341|ref|YP_001526633.1| peptidase S49 protein [Azorhizobium caulinodans ORS 571] gi|158332230|dbj|BAF89715.1| peptidase S49 protein [Azorhizobium caulinodans ORS 571] Length = 323 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/195 (40%), Positives = 127/195 (65%), Gaps = 1/195 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +SPHVAR+ I G I + ++ ++ +E I R + A A+IVS+ SPGG+ E ++ A++++ Sbjct: 48 SSPHVARVVIGGIIRNDRDRVKMLEEIGRSN-ARAVIVSIDSPGGTVTGAEQLYDALRQL 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+ V MAAS GY+ + S+ IV+ ++VGSIGV+FQ+P V L K+GV+++ Sbjct: 107 AAKKPVVAVVEGMAASGGYIAAIGSDHIVSRRNAMVGSIGVIFQFPNVTDLLGKIGVTVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KSSP+KA P+ + +P+A + +V SY WF LVSE R + + +SDGR++ Sbjct: 167 DIKSSPLKAAPNGYQPTSPEARAAINSLVVDSYGWFKGLVSERRKLSDARLAEVSDGRVF 226 Query: 214 TGAEAKKVGLIDVVG 228 TG + + L+D +G Sbjct: 227 TGHQGLALQLVDELG 241 >gi|300023831|ref|YP_003756442.1| signal peptide peptidase SppA, 36K type [Hyphomicrobium denitrificans ATCC 51888] gi|299525652|gb|ADJ24121.1| signal peptide peptidase SppA, 36K type [Hyphomicrobium denitrificans ATCC 51888] Length = 321 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/270 (32%), Positives = 148/270 (54%), Gaps = 14/270 (5%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI I G I + ++ ++ ++ I+ D S +++ ++SPGG+ GEA++ ++ + + Sbjct: 50 QIARITIEGTISEDRDQLKMLKDIAEDSSVAGVLMYVNSPGGTTTGGEALYEGLRALAAK 109 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP++ + +AASA Y+ A++ IVA S+ GS+GV+ Q+P LDK+GV + VK Sbjct: 110 KPIVAQFGTVAASAAYIAGIATDHIVARGNSITGSVGVIVQWPEFVQLLDKVGVKVNEVK 169 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S +KA PSPF + Q+ Q +V+ + WFV LV R + L DGR+++G Sbjct: 170 SGVLKASPSPFEPLTEGGKQVAQGMVNDGFKWFVGLVETRRGVKAADIPGLLDGRVFSGR 229 Query: 217 EAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNP--PKNYWFCDLKNLSISSLL- 272 EA + L+D +GG+EE + L V QS K+ DW P P +Y F + LL Sbjct: 230 EALQAKLVDQIGGEEEAVKWLKDEKNVPQSA-KLVDWKPSTPNSYGFAGMSGQIAGFLLG 288 Query: 273 ---EDTIPLMKQTK------VQGLWAVWNP 293 D + + + + + GL ++W+P Sbjct: 289 SSAGDLVNFLSRERSFSTLGLDGLLSLWHP 318 >gi|90420561|ref|ZP_01228468.1| putative peptidase, S49 family [Aurantimonas manganoxydans SI85-9A1] gi|90335289|gb|EAS49042.1| putative peptidase, S49 family [Aurantimonas manganoxydans SI85-9A1] Length = 325 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 82/197 (41%), Positives = 131/197 (66%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +AR++I G I Q+L++ ++R+ +D+ A+++ + SPGG+ GE+I+ A++ + Sbjct: 50 QIARVSIEGMILKDQKLLDLLDRLKDEDAVKAVVLRIDSPGGTTVGGESIYEAVRAIAEV 109 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV EV +AASAGY+I+ ++ IVA TS+VGSIGV+FQY LD +GV I ++K Sbjct: 110 KPVAAEVGTLAASAGYMIASGADHIVARRTSIVGSIGVIFQYVDASQLLDTVGVQINAIK 169 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S+P+KAEPSPF+ A +M+ +V +Y WFV LV+E R++ + L+DG I++G Sbjct: 170 SAPLKAEPSPFAPAPEAAKEMINRLVMDTYEWFVALVAERRDMSMAEAKALADGSIFSGQ 229 Query: 217 EAKKVGLIDVVGGQEEV 233 + K L+D +GG+ EV Sbjct: 230 QGLKNRLVDALGGENEV 246 >gi|299133338|ref|ZP_07026533.1| signal peptide peptidase SppA, 36K type [Afipia sp. 1NLS2] gi|298593475|gb|EFI53675.1| signal peptide peptidase SppA, 36K type [Afipia sp. 1NLS2] Length = 326 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 155/276 (56%), Gaps = 27/276 (9%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +AR+ I G I + E + +ER+ + D+A A+IV ++SPGG+ E +F A+ ++K +K Sbjct: 54 IARVKIEGLIRSNDERVAALERLEKSDAA-AVIVHINSPGGTTAGSEQLFDALTRLKAKK 112 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ + + AS Y+ + AS+ I+A +TSLVGSIGVLFQ+P L +GV ++ VKS Sbjct: 113 PLVVVIEGLGASGAYITALASDHIIAQQTSLVGSIGVLFQFPNFTDLLKTVGVKVEEVKS 172 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 +P+KA P+ + +P+A + +V S+ WF LV R++ +SDGR++TG + Sbjct: 173 APLKAAPNGYEPTSPEARAALDALVKDSFAWFKDLVKTRRHMDDATLQTVSDGRVFTGRQ 232 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDLKNL------S 267 A + L+D +G ++ + L Q+ KIK P ++Y F D+ L + Sbjct: 233 AMGLKLVDELGDEKTAVKWL------QAQNKIKGDLPVRDYKLSPRFSDMTFLRAAAATT 286 Query: 268 ISSLLEDTIP----------LMKQTKVQGLWAVWNP 293 + SL T+ L +Q +++G+ A+W P Sbjct: 287 LESLGLPTVARFVGGNGAASLSEQLQLEGMLALWRP 322 >gi|115522478|ref|YP_779389.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisA53] gi|115516425|gb|ABJ04409.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rhodopseudomonas palustris BisA53] Length = 324 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 157/284 (55%), Gaps = 23/284 (8%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 S + + +S +AR+ I G I Q+ +E ER+ + SA A++V ++SPGG+ E Sbjct: 43 SGTMSLAGSSGSIARVKIDGLIRSDQDRVEAFERLEKS-SAAAVVVHINSPGGTTAGSEQ 101 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++ A+ ++K +KP++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP + Sbjct: 102 LYDALMRLKAKKPLVVVVEGLAASGGYIAALASDQIIARQSSLVGSIGVLFQYPNFSELM 161 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +GV ++ VKSSP+KA P+ F +P+A + +V SY WF LV + R + + Sbjct: 162 KTVGVKVEEVKSSPLKASPNGFEPTSPEARAALDSLVKDSYAWFRGLVKDRRQMDDSQLE 221 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFC 261 ++DGR++TG +A + L+D +G ++ L A +K+K P ++Y Sbjct: 222 KVADGRVFTGRQAVGLKLVDQLGDEKTAVAWLVAQ------KKVKPDLPVRDYKLEPRLG 275 Query: 262 DLKNL-SISSLLEDTIPL-----------MKQTKVQGLWAVWNP 293 DL L S +SL + L + Q + G+ A+W P Sbjct: 276 DLTFLRSAASLGLSAVGLDAAAQLLAQAGIDQFALDGMLALWRP 319 >gi|298293883|ref|YP_003695822.1| signal peptide peptidase SppA, 36K type [Starkeya novella DSM 506] gi|296930394|gb|ADH91203.1| signal peptide peptidase SppA, 36K type [Starkeya novella DSM 506] Length = 324 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 93/277 (33%), Positives = 154/277 (55%), Gaps = 24/277 (8%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +SPHVAR+AI G I + +E +E +E I + A A+I+S+ SPGG+ A++ ++++ Sbjct: 52 SSPHVARVAIGGLIRNERERLEMLEDIGKS-GAKAVILSIDSPGGTVVGSAALYDGLRRL 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KP++ V +AAS Y+ + ++ IVA +LVGSIGV+FQ+P + +GV+ + Sbjct: 111 AEKKPIVAVVDGIAASGAYIAALGADHIVAPRNALVGSIGVIFQFPNFAELMKSVGVAYE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS+P+KA P+ F + +A ++ +V+ SY WF LVSE R + DK SDGR++ Sbjct: 171 EIKSTPLKAAPNMFDPPSEEARAAVRSLVEDSYDWFKGLVSERRLLDGDKLASASDGRVF 230 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSIRKIKDWNPPK----NYW--------- 259 TG +A + LID +G + L GV + + ++DW+ + W Sbjct: 231 TGHQALPLRLIDEIGDERTARDWLARERGVSKDL-PVRDWHTKRVGDEFGWLRGTSVRLM 289 Query: 260 ----FCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 DL NL+I + + L Q ++ GL A+W Sbjct: 290 SLIGLGDLANLTIGAASD----LAMQARLDGLLALWQ 322 >gi|162148930|ref|YP_001603391.1| peptidase [Gluconacetobacter diazotrophicus PAl 5] gi|209545314|ref|YP_002277543.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter diazotrophicus PAl 5] gi|161787507|emb|CAP57103.1| putative peptidase [Gluconacetobacter diazotrophicus PAl 5] gi|209532991|gb|ACI52928.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter diazotrophicus PAl 5] Length = 313 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 126/197 (63%), Gaps = 1/197 (0%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 H+ R+ + G I D+++LI+ +++ ++ DS +I+++ SPGGS GEA+ A+ + Sbjct: 52 HLVRVRVAGIIGSDNRKLIDLVDKAAKTDSVRGMILAVDSPGGSVSGGEALHDAVARFAA 111 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 RKPV + +AASAGY+IS + + A +++L GSIGV+ + P V LD++GV + + Sbjct: 112 RKPVAVTMGGLAASAGYMISVPAQRVFAVQSTLTGSIGVIMEAPDVSGLLDRVGVKVDQL 171 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S PMK +PS ++P+ QM+Q VV + FV +V++ R++P ++ L+DGR +TG Sbjct: 172 VSGPMKGQPSGTQPLSPEGRQMLQGVVADLFDQFVTMVADGRHMPVERVRTLADGRPYTG 231 Query: 216 AEAKKVGLIDVVGGQEE 232 +A +GLID +G + + Sbjct: 232 RQALSLGLIDQIGDERD 248 >gi|148251723|ref|YP_001236308.1| S49 family peptidase [Bradyrhizobium sp. BTAi1] gi|146403896|gb|ABQ32402.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Bradyrhizobium sp. BTAi1] Length = 326 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 169/306 (55%), Gaps = 34/306 (11%) Query: 13 VMLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 V++++ L+ + + S S +AR+ I G I E +E +ER+ + SA A+ Sbjct: 26 VLIAIAALSAIGLAMSPRGRTALSTSGSIARVNIEGLIRSDHERVEALERLE-NSSAEAV 84 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 IV ++SPGG+ E ++ ++ ++K +KP++ V +AAS GY+ + A++ IVA ++SLV Sbjct: 85 IVHINSPGGTTAGSEQLYDSLVRLKAKKPLVVVVEGLAASGGYIGAIAADHIVAQQSSLV 144 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGVLFQYP V L +GV ++ VKSSP+KA P+ + +P+A + +V SY WF Sbjct: 145 GSIGVLFQYPNVSELLKTIGVKVEEVKSSPLKAAPNGYEPTSPEARAALDALVKDSYAWF 204 Query: 190 VRLVSESRNIPYDKTLV--LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 LV + R + D L+ ++DGR++TG +A ++ LID +G ++ L A + Sbjct: 205 RGLVKDRRGM--DDALLEKVADGRVFTGRQAIELKLIDELGDEKTAVAWLVA------NK 256 Query: 248 KIKDWNPPKNY----WFCDLKNL-SISSLLEDTIPL---------------MKQTKVQGL 287 +K P ++Y F DL L + +SL+ + + L + + + G+ Sbjct: 257 NVKKDLPVRDYKLVPRFGDLTFLRTATSLVLNAVGLSGIAHQIEQAGVVQAVDRLGLDGM 316 Query: 288 WAVWNP 293 A+W P Sbjct: 317 LALWTP 322 >gi|296116410|ref|ZP_06835024.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter hansenii ATCC 23769] gi|295977003|gb|EFG83767.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter hansenii ATCC 23769] Length = 314 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 153/269 (56%), Gaps = 9/269 (3%) Query: 33 DNSPHVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 D H+ R+ I G + D+ + + I R + + +++ +++PGG+ GE + AI Sbjct: 47 DGRDHLVRLRIDGVVGSDTTDTLALIRRARSNPAVKGMLLDINTPGGAVTGGETLHDAIA 106 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + +KPV + +AASAGY+I+ + + A ++L GSIGV+ Q P V LDK+GV Sbjct: 107 EFARQKPVAVSMGSLAASAGYMIAVPAQRLFAHHSTLTGSIGVIMQAPDVSGLLDKVGVR 166 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + S PMK +PS ++P+ +M+Q V+ Y FV +V++ R++P +K L L+DGR Sbjct: 167 VDQLVSGPMKGQPSAVQPLSPQGREMLQGVIADLYDMFVTMVAQGRHLPREKVLELADGR 226 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCDLKNL--SI 268 +TG++A +GL+D +GG+EE + L L + +++ ++D P ++ +++L S+ Sbjct: 227 PYTGSQALSLGLVDQIGGEEEAKEWLIRTLHLSETV-DVEDMKPRPSFHLDWMRHLLGSV 285 Query: 269 SSLLEDTIPL----MKQTKVQGLWAVWNP 293 ++ ++ L + G A+W P Sbjct: 286 MGIVAESDRLDGLFRPGGDLDGAVAIWKP 314 >gi|90421920|ref|YP_530290.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB18] gi|90103934|gb|ABD85971.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB18] Length = 325 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/286 (32%), Positives = 157/286 (54%), Gaps = 27/286 (9%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S + S +AR+ I G I + +E +ER+ + +A A++V ++SPGG+ E ++ Sbjct: 43 SGPLAGTSGAIARVKIDGLIRSDADRVEALERLEKS-AAAAVVVHINSPGGTTAGSEQLY 101 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+ ++K +KP++ + +AAS GY+ + AS+ IVA ++SLVGSIGVLFQ+P + Sbjct: 102 DALVRLKAKKPLVVVIEGLAASGGYIAAIASDHIVAQQSSLVGSIGVLFQFPNFTELMKT 161 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV ++ VKSSP+KA P+ F +P+A ++ +V SY WF LV R + + Sbjct: 162 VGVKVEEVKSSPLKAAPNGFEPTSPEARAALESLVKDSYAWFRGLVKSRRGMDDQLLEKV 221 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDL 263 +DGR++TG +A + LID +G ++ L A +K+K P ++Y F DL Sbjct: 222 ADGRVFTGRQAVDLKLIDQLGDEKTAIAWLVAE------KKVKADLPVRDYKLTPRFGDL 275 Query: 264 KNL-SISSLLEDTIPL---------------MKQTKVQGLWAVWNP 293 L + +S+ D + L ++Q + G+ A+W P Sbjct: 276 TFLRAATSITLDALGLNAVARQIERAGVVQSVEQLGLDGMLALWRP 321 >gi|296447328|ref|ZP_06889256.1| signal peptide peptidase SppA, 36K type [Methylosinus trichosporium OB3b] gi|296255193|gb|EFH02292.1| signal peptide peptidase SppA, 36K type [Methylosinus trichosporium OB3b] Length = 325 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 126/198 (63%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 SPH+AR+++ G I +E ++ ++ I D A+A+++++ SPGG+ E + ++++ Sbjct: 52 SPHIARLSVSGIITGDKETLDLVKSIGEDAKASAVLLAIDSPGGTTTGAERLHDELRRLA 111 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV+ V +AAS GY+ + A++ IVA SLVGSIGVLFQ+P V LD +GV +++ Sbjct: 112 AKKPVVAVVGTLAASGGYIAAIAADEIVAHGNSLVGSIGVLFQFPNVGKLLDNVGVQMET 171 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KA P+ F + +A + +V SY WF LV E R + + ++DGR++T Sbjct: 172 VKSSPLKAAPNGFEPTSEEARAAIAALVADSYDWFKGLVKERRKLDDSELAKVTDGRVFT 231 Query: 215 GAEAKKVGLIDVVGGQEE 232 + + L+D++GG+ E Sbjct: 232 ARQGLPLKLVDLIGGERE 249 >gi|27375852|ref|NP_767381.1| proteinase IV [Bradyrhizobium japonicum USDA 110] gi|27348990|dbj|BAC46006.1| proteinase IV [Bradyrhizobium japonicum USDA 110] Length = 326 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 124/194 (63%), Gaps = 1/194 (0%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +AR+ I G I + + +ER+ + A A+IV ++SPGG+ E ++ ++ ++K +K Sbjct: 54 IARVQIDGLIRSDSDRTQALERL-ENSQAAAVIVHINSPGGTTAGSEQLYDSLVRLKAKK 112 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP V L +GV ++ VKS Sbjct: 113 PLVVVVEGLAASGGYITAIASDHIIAQQSSLVGSIGVLFQYPNVTELLKTIGVKVEEVKS 172 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ F +P+A + ++V SY WF LV E R + + ++DGR++TG + Sbjct: 173 SPLKAAPNGFEPTSPEARAALDELVKDSYAWFKGLVKERRGMDDTQLEKVADGRVFTGRQ 232 Query: 218 AKKVGLIDVVGGQE 231 A + LID +G ++ Sbjct: 233 AIDLKLIDQIGDEK 246 >gi|330994449|ref|ZP_08318374.1| Putative signal peptide peptidase sppA [Gluconacetobacter sp. SXCC-1] gi|329758449|gb|EGG74968.1| Putative signal peptide peptidase sppA [Gluconacetobacter sp. SXCC-1] Length = 342 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 80/231 (34%), Positives = 135/231 (58%), Gaps = 6/231 (2%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAG 83 W+ H +PH+ + ++G I D E +E + R +RDD+A L++ ++SPGG+ G Sbjct: 76 GWTGH---QAPHLVHLKVQGVIGADEHENVEALNR-ARDDAAVRGLLLEVNSPGGAVTGG 131 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E + A+ RKPV+ + +AASAGY++S ++ I A ++L GSIGV+ + P V P Sbjct: 132 EVLHDAVAAFARRKPVVVSMGSVAASAGYMVSTPASRIFANRSTLTGSIGVILESPDVSP 191 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD++GV + + S PMK +PS ++P+ M+Q VV Y +FV +V++ R++P + Sbjct: 192 LLDRVGVRVDQLVSGPMKGQPSVVKPLSPEGRAMLQGVVSDLYDFFVTVVAQDRHMPAGR 251 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 L+DGR +TG +A +GL+D +G ++ + L + K+ D P Sbjct: 252 VRELADGRPFTGQQALPLGLVDEIGNMDDARKWLVKKTILPDDAKVTDIGP 302 >gi|88607225|ref|YP_504886.1| signal peptide peptidase SppA, 36K type [Anaplasma phagocytophilum HZ] gi|88598288|gb|ABD43758.1| signal peptide peptidase SppA, 36K type [Anaplasma phagocytophilum HZ] Length = 298 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 131/211 (62%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 FS++ +VARI I G I +++ + R+ D S A+++ + SPGG+ E Sbjct: 41 FSFADIAGGAGGYVARIGIEGTIGRNKDRTALLSRVEDDSSIKAVVLRIDSPGGTVGDSE 100 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++R I+ + +KPV+ + +AAS GY+ + A++ ++A ++ GSIGVL QY V Sbjct: 101 ELYRQIRAIAEKKPVVAVMGNVAASGGYMTALAADHVIANNGTITGSIGVLTQYVGVARI 160 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 ++LG+++K++K+S +KA SP E++ + +M +++ +H+FV +V+E R + ++ Sbjct: 161 AERLGITLKTIKTSELKASMSPLEEMSKNSEDVMHELIKDFHHFFVSMVAERRGLSEEEA 220 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 ++DGR++TGA+A +V L+D +GG+ E + Sbjct: 221 YKVADGRVYTGAQALQVKLVDELGGEREALE 251 >gi|92115699|ref|YP_575428.1| signal peptide peptidase SppA, 36K type [Nitrobacter hamburgensis X14] gi|91798593|gb|ABE60968.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Nitrobacter hamburgensis X14] Length = 325 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + R+ I G I + Q +E +ER+ + + A A+IV ++SPGG+ E ++ A+ ++K +K Sbjct: 53 IQRVNIEGLIRNDQNRVEALERLGKSN-APAVIVHINSPGGTTAGSEQLYDALMRLKAKK 111 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V + AS GY+ + AS+ I+A +T+LVGSIGVLFQYP L +GV ++ VKS Sbjct: 112 PMVVVVDGLCASGGYIAALASDHIIAQQTALVGSIGVLFQYPNFTDLLKTVGVKVEEVKS 171 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ F +P+A + +V SY WF LV R + + ++DGR++TG + Sbjct: 172 SPLKAAPNGFEPTSPEARAALDALVKDSYAWFRGLVQTRRGMDNGQLEKVADGRVFTGRQ 231 Query: 218 AKKVGLIDVVGGQE 231 A + LID +G ++ Sbjct: 232 AVDLKLIDQLGDEK 245 >gi|75674258|ref|YP_316679.1| peptidase S49, SppA [Nitrobacter winogradskyi Nb-255] gi|74419128|gb|ABA03327.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Nitrobacter winogradskyi Nb-255] Length = 327 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 124/198 (62%), Gaps = 1/198 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S + R+ I G I Q+ +E +ER+ + A A+IV ++SPGG+ E ++ A+ ++ Sbjct: 51 GSSAIQRVNIDGLIRSDQKRVEALERLGKS-KAPAVIVHINSPGGTTAGSEELYEALTRL 109 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K +KP++ V + AS GY+ + AS+ IVA +T+LVGSIGVLFQYP V L +GV ++ Sbjct: 110 KAKKPMVVVVEGLGASGGYIAALASDHIVAQQTALVGSIGVLFQYPNVTELLKTVGVKVE 169 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKSSP+KA PS + +P+A + +V S+ WF LV R + + ++DGR++ Sbjct: 170 AVKSSPLKAAPSGYEPTSPEARAAIDALVKDSFAWFRGLVQNRRGMDDAQLEKVADGRVF 229 Query: 214 TGAEAKKVGLIDVVGGQE 231 TG +A + LID +G ++ Sbjct: 230 TGRQALDLKLIDQLGDEK 247 >gi|294851553|ref|ZP_06792226.1| protease IV [Brucella sp. NVSL 07-0026] gi|294820142|gb|EFG37141.1| protease IV [Brucella sp. NVSL 07-0026] Length = 225 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 75/181 (41%), Positives = 120/181 (66%), Gaps = 1/181 (0%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LG Sbjct: 1 MRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLG 60 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++ Sbjct: 61 VKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALAN 120 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 G ++TG +A LID +GG+ E L G+ + ++ +W P + L++L I Sbjct: 121 GAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIH 179 Query: 270 S 270 + Sbjct: 180 A 180 >gi|85714139|ref|ZP_01045128.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A] gi|85699265|gb|EAQ37133.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A] Length = 327 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 125/194 (64%), Gaps = 1/194 (0%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + R++I G I Q+ +E +ER+ + SA A+IV ++SPGG+ E ++ A+ ++K +K Sbjct: 55 IQRVSINGLIRSDQKRVEALERLGKS-SAPAVIVHINSPGGTTAGSEELYDALTRLKAKK 113 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V + AS GY+ + AS+ IVA +T+LVGSIGVLFQYP L +GV ++++KS Sbjct: 114 PMVVVVEGLGASGGYIAALASDHIVAQQTALVGSIGVLFQYPNFTELLKTVGVQMEAMKS 173 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ + +P+A + +V S+ WF LV + R + + ++DGR++TG + Sbjct: 174 SPLKAAPNGYEPTSPEARAAIDALVKDSFDWFRGLVRDRRGMDDAQLEKVADGRVFTGRQ 233 Query: 218 AKKVGLIDVVGGQE 231 A + LID +G ++ Sbjct: 234 AVNLKLIDQLGDEK 247 >gi|225849223|ref|YP_002729387.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium azorense Az-Fu1] gi|225643770|gb|ACN98820.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium azorense Az-Fu1] Length = 276 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 139/246 (56%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 + V++ LV + +V++ SS E + P VA I + I D E + I + +D+S A++ Sbjct: 3 KKVLIGLVAIFIVFYIISSLKETSKPKVALIRVNDTIMDHMETVSNIAQAEKDESIKAVV 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 +++ SPGG+ A + I+RAI+K++ +KPV+ + +AAS GY IS +N+I A ++ G Sbjct: 63 IAVDSPGGAVGASQEIYRAIEKLREKKPVVVSMGNVAASGGYYISAPANVIYANPGTITG 122 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ Q + L+K+GV + +VKS K P + P+ Q+++ V Y F+ Sbjct: 123 SIGVIIQQVDLSEVLNKIGVKVNTVKSGENKDILYPTKPLTPEQKQILEKTVMDVYDQFL 182 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + + R I + +DGR+++G EA+K+GLID +G ++ + LG + Sbjct: 183 DAIVKYRPIKKEVLKTYADGRVFSGREAQKIGLIDKLGNIQDAVKEAKKLGKLPEDAPVI 242 Query: 251 DWNPPK 256 + PPK Sbjct: 243 EIKPPK 248 >gi|319789919|ref|YP_004151552.1| signal peptide peptidase SppA, 36K type [Thermovibrio ammonificans HB-1] gi|317114421|gb|ADU96911.1| signal peptide peptidase SppA, 36K type [Thermovibrio ammonificans HB-1] Length = 292 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 145/260 (55%), Gaps = 6/260 (2%) Query: 5 LKKIKTRYVMLSLVTLTVVYFS-----WSSHVEDNSPHVARIAIRGQIEDSQELIERIER 59 +K++K +++L ++ V+ + S P VA + I G I S+ ++ ++R Sbjct: 1 MKRLKGIFLLLGVMAFVVLVMALFPKEMGSIEAAYGPKVAIVRIEGVISRSEPYLKLLDR 60 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + R+ S A+++ + SPGG A + I + +V RKPV+ + +AAS G +S + Sbjct: 61 VERNSSVKAVVLRVDSPGGVVGACQEIHDKVAEVARRKPVVVSMDSVAASGGLYVSVPAT 120 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA ++ GSIGV+ Q V KLG+ +VKS K +PF + +P+ ++++Q Sbjct: 121 KIVANPGTITGSIGVIIQVLNVSQLAQKLGIEAVTVKSGRCKDLLNPFKKPDPECLKVVQ 180 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +++D SY+ FV V++ R++P +K +DGRI+TG AK++GL+D +GG E+ + Sbjct: 181 NLIDDSYNQFVEAVAKGRHLPVEKVRSFADGRIFTGRRAKELGLVDYLGGIEKAVEVAKK 240 Query: 240 LGVDQSIRKIKDWNPPKNYW 259 LG K+ + P + +W Sbjct: 241 LGRCPGA-KVVEVKPKRGFW 259 >gi|296533548|ref|ZP_06896118.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] gi|296266118|gb|EFH12173.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] Length = 307 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 130/222 (58%), Gaps = 7/222 (3%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 H+AR+ + G I D ++L E + +RD + +++S+ SPGG+ GE + A+++ ++ Sbjct: 52 HLARLTVEGTISDDRKLTEAVLEAARDPAVRGILLSIDSPGGTVAGGEGLHAALRRFRDS 111 Query: 97 -KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ + M ASA Y+I+ + + A +++L GSIGV+ Q LD LG+ + + Sbjct: 112 GKPVVAVMRGMGASAAYMIAMPAQRVFARDSTLTGSIGVILQSFEASRLLDTLGIRAEML 171 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S +K EP+PF + P+ ++ V+ + FV +V+E RN+P ++ L+DGRI+TG Sbjct: 172 TSGALKGEPNPFRPLTPEGRAALEAVLRDLHEQFVTIVAEGRNLPRERVAELADGRIYTG 231 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSI---RKIKDWNP 254 +A ++ LID +GG+ E L A +Q I ++D +P Sbjct: 232 RQALELRLIDAIGGEPEARAWLAA---EQDIPASTPVRDLDP 270 >gi|206889350|ref|YP_002249562.1| signal peptide peptidase SppA, 36K type [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741288|gb|ACI20345.1| signal peptide peptidase SppA, 36K type [Thermodesulfovibrio yellowstonii DSM 11347] Length = 285 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 84/281 (29%), Positives = 156/281 (55%), Gaps = 16/281 (5%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAI---RGQIEDSQELIERIERISR 62 KK+K ++++ T++ S+ + ++S ++AI +G I DS+ I+ I++ + Sbjct: 4 KKLKFFFIIIG----TLILISFLITIMESSLTAGKVAIVNIKGIIVDSKPSIDEIKQYRK 59 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D S A+++ + SPGG+ + I+ I++ KPV+ + +AAS GY ISC + I+ Sbjct: 60 DPSIKAIVLRVDSPGGAVVPSQEIYEEIKRTIKSKPVVVSMGSIAASGGYYISCPATKII 119 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A +L GSIGVL + P +K LDK+GV + +KS K SPF + + +++Q + Sbjct: 120 ANPGTLTGSIGVLIEIPNIKGLLDKIGVKAEVIKSGKYKDITSPFKPLQNEEKEILQKLT 179 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + + F++ V+E R +P + ++DGR++TG +AK++GL+D +G + YA+ + Sbjct: 180 NDVHEQFIKAVAEGRKVPVEDIKKIADGRVFTGLKAKELGLVDEIGDLD------YAIKI 233 Query: 243 DQSIRKIK---DWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + KIK + K+ D + SL++ +P M+ Sbjct: 234 AAQLAKIKGEPEIVTKKSTLLIDFLKGNTESLVKKILPYMQ 274 >gi|325294625|ref|YP_004281139.1| signal peptide peptidase SppA, 36K type [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065073|gb|ADY73080.1| signal peptide peptidase SppA, 36K type [Desulfurobacterium thermolithotrophum DSM 11699] Length = 292 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 137/236 (58%), Gaps = 5/236 (2%) Query: 5 LKKIKTRYVMLSLVTLTVVYFS-----WSSHVEDNSPHVARIAIRGQIEDSQELIERIER 59 ++++K + L +V ++ FS +SS V + + + G I+ S ++ +++ Sbjct: 1 MRRLKKFFTFLGIVFFILILFSIFKGFFSSKVAVPGEKIGVVKVEGVIKRSDTYVKLLDK 60 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + R+ A+++ + SPGG A + I+ ++++ +KP++ + +AAS G IS + Sbjct: 61 LERNKEIKAIVLRVDSPGGVVGACQEIYDKVKEITKKKPIVVSMGSIAASGGLYISVPAT 120 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA ++ GSIGV+ Q VK DK+G+ + +VKS K +PF E + ++Q++Q Sbjct: 121 KIVANPGTITGSIGVILQAYNVKELADKVGIKVITVKSGKFKDLLNPFREPDKGSLQILQ 180 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +++ SY FV V++ R +P +K +DGR++TG +AKK+GL+D +GG E+ + Sbjct: 181 ALINDSYEQFVEAVAKGRKLPIEKVKKFADGRVFTGRQAKKLGLVDELGGFEKAVE 236 >gi|20807332|ref|NP_622503.1| periplasmic serine protease (ClpP class) [Thermoanaerobacter tengcongensis MB4] gi|20515846|gb|AAM24107.1| Periplasmic serine proteases (ClpP class) [Thermoanaerobacter tengcongensis MB4] Length = 305 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 127/223 (56%), Gaps = 11/223 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL----------IERIERISRDDSA 66 L +L + S S +S + + I G I D + +E+I R D++ Sbjct: 20 LASLFLTQPSTESQKTVSSNTIGVVTIEGVIGDFSNILGIPQFTPDPVEQIRRAQEDNTV 79 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAE 125 A++V ++SPGGSA I+ ++++K K VI + + AAS GY+ +C +IIVA Sbjct: 80 KAIVVKINSPGGSAAKSVEIYTELKRLKETGKKVIVSMGDAAASGGYMAACGGDIIVANP 139 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ +++Q ++D + Sbjct: 140 ATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDMGSPTRDLTPEEKKILQGIIDDT 199 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y FV +VSE R +P +K L+DGRI+TG +A KVGL+D +G Sbjct: 200 YEQFVEIVSEGRKMPIEKVKELADGRIFTGRQALKVGLVDKLG 242 >gi|254478286|ref|ZP_05091666.1| signal peptide peptidase SppA, 36K type [Carboxydibrachium pacificum DSM 12653] gi|214035751|gb|EEB76445.1| signal peptide peptidase SppA, 36K type [Carboxydibrachium pacificum DSM 12653] Length = 306 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGY 112 +E+I R D++ A++V ++SPGGSA I+ ++++K K VI + + AAS GY Sbjct: 68 VEQIRRAQEDNTVKAVVVKINSPGGSAAKSVEIYTELKRLKETGKKVIVSMGDAAASGGY 127 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 + +C +IIVA ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P Sbjct: 128 MAACGGDIIVANPATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDMGSPTRDLTP 187 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +++Q ++D +Y FV +VSE R +P +K L+DGRI+TG +A KVGL+D +G Sbjct: 188 EEKRILQGIIDDTYEQFVEIVSEGRKMPIEKVKELADGRIFTGRQALKVGLVDKLG 243 >gi|225849949|ref|YP_002730183.1| signal peptide peptidase SppA, 36K type [Persephonella marina EX-H1] gi|225644848|gb|ACO03034.1| signal peptide peptidase SppA, 36K type [Persephonella marina EX-H1] Length = 275 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 133/227 (58%), Gaps = 5/227 (2%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 KKI V+ ++ + +FS+ + +P +A I I G I D I+ IE DDS Sbjct: 3 KKIAIGVVLFLIIIYLISFFSYRA-----TPKIAIIEIHGVISDFYSHIQNIESAESDDS 57 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++S+ SPGG+ A + I+RAI++++ +KPV+ + +AAS GY IS +++I A Sbjct: 58 IKAVVISVDSPGGTVGAAQEIYRAIERLRTKKPVVVSMGNVAASGGYYISAPASVIYANP 117 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGV+ Q+ + LDKLG+ ++++KS K P ++P+ ++++D + Sbjct: 118 GTITGSIGVIIQHMDLSRVLDKLGIKVENIKSGKNKDILYPNKSLSPEQKKLIEDTIKDV 177 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Y F+ + R I D+ +DGRI++G +AKK+ L+D +G ++ Sbjct: 178 YDQFLEAIVRYRPITKDQLRPYADGRIFSGRQAKKIKLVDKLGNIQD 224 >gi|313204613|ref|YP_004043270.1| signal peptide peptidase a [Paludibacter propionicigenes WB4] gi|312443929|gb|ADQ80285.1| signal peptide peptidase A [Paludibacter propionicigenes WB4] Length = 587 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/270 (32%), Positives = 149/270 (55%), Gaps = 25/270 (9%) Query: 20 LTVVYFSWSSHVEDNSPH----VARIAIRGQIEDSQ-------ELIERIERISRDDSATA 68 L V S S + DNS + VA I G+I D++ ++++ I +++D + A Sbjct: 288 LVFVKNSAMSKLPDNSKYDKNKVAVIYAIGEITDTEGDEIVARDMVKTINDVAKDSAVKA 347 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ +SSPGGSAYA E I+ A+ +K +KP+I + + AAS GY ISC ++ I+A ++ Sbjct: 348 VVLRVSSPGGSAYASEQIWHALSMLKAKKPLIVSMGDYAASGGYYISCLADKIIAQPNTI 407 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ P +K +KLG++ VK++ M S P+ +MQ+ V+ Y Sbjct: 408 TGSIGIFGAIPNIKGLNEKLGLTYDGVKTNKMSDGISINRSFTPEERDLMQNYVNRGYEL 467 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV+ ++ R + ++ +++GR+WTG +A K+GL+D +GG + + L VD++ K Sbjct: 468 FVKRCAQGRKMKVEQIKAIAEGRVWTGEDAIKIGLVDKIGGLNDAIK----LAVDKA--K 521 Query: 249 IKDWN----PPKNYWFCDLKNLSISSLLED 274 + +N P K + L + SL ED Sbjct: 522 LSSYNLKEYPEKEDFTAKL----LKSLTED 547 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 32/237 (13%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-----KNRKPVITEVHEM 106 E+++ IE+ DD+ IV + GGS G A + I+ K+ K ++ Sbjct: 86 EVLKNIEKAKNDDN----IVGIYLKGGSLSGGIASVKEIRNALIDFKKSGKFIVAYADNY 141 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + YL+S A+ I++ + ++ G+ + ++K LDKLG+ ++ VK K+ P Sbjct: 142 SQKMYYLVSVANKILINPQ-GMLELKGLSTETMFLKNTLDKLGIEMQIVKVGTFKSAVEP 200 Query: 167 F-----SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAK 219 + S+ N V + ++S ++ ++ +S SR IP +K +D + ++K Sbjct: 201 YILTKMSDANRLQVNVF---LNSIWNTILKEISASRKIPTEKLNSYADEMMMYQPTEKSK 257 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRK-IKDWNPPKNYWFCDLKNLSISSLLEDT 275 + L+D + +YA VD ++K +KD+ + F +KN ++S L +++ Sbjct: 258 QYNLVDSL---------VYADQVDSILQKYVKDFKKGDDLVF--VKNSAMSKLPDNS 303 >gi|307267146|ref|ZP_07548655.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter wiegelii Rt8.B1] gi|326390690|ref|ZP_08212244.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter ethanolicus JW 200] gi|306917831|gb|EFN48096.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter wiegelii Rt8.B1] gi|325993227|gb|EGD51665.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter ethanolicus JW 200] Length = 304 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 134/239 (56%), Gaps = 16/239 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDSQEL------ 53 KK + + L+ TV+ + + ++N S + I I G I ++ L Sbjct: 3 KKALIGLIFIVLIISTVIASIFLTMPQENKSVPSVSNTIGVITIEGVIGETNILGIPQVT 62 Query: 54 ---IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +E+I + D + A++V ++SPGGSA I+ ++++K K VI + + AAS Sbjct: 63 GDPVEQIRKAQEDSTVKAVVVKINSPGGSAAKSVEIYTELKRLKETGKKVIISMGDAAAS 122 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+ +C +IIVA ++ GSIGV+ QY + DKLG+ ++KS P K SP + Sbjct: 123 GGYMAACGGDIIVANPATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDMGSPTRD 182 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + P+ +++Q V+D +Y FV +VSE R +P DK L+DGRI+TG +A KVGL+D +G Sbjct: 183 LTPEEKKILQGVIDDTYEQFVEIVSEGRKMPIDKVKELADGRIFTGRQALKVGLVDKLG 241 >gi|291280462|ref|YP_003497297.1| signal peptide peptidase SppA [Deferribacter desulfuricans SSM1] gi|290755164|dbj|BAI81541.1| signal peptide peptidase SppA [Deferribacter desulfuricans SSM1] Length = 285 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 141/256 (55%), Gaps = 9/256 (3%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 M+F+L I V++ + V FS + + N PH+ I + G I DS++++ + + Sbjct: 8 MKFLLSLI----VIVIFIYFVVYLFSGKNEIVLNKPHIKVIKLEGIIVDSEKIVRELRKA 63 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 +D +I+ ++SPGG+ + I++AI+KVK KPV + + AS GY ++ A + Sbjct: 64 EENDFVKGVIIRINSPGGAVAPSQEIYKAIRKVK--KPVYAAISTLGASGGYYVAAACDK 121 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I S+ GSIGV+ ++ K DK+GV +S+KS K S E++ + +++Q Sbjct: 122 IYVLGGSITGSIGVIMRFSNFKELYDKIGVKFESIKSGKFKDIGSSSREMSKEERELLQK 181 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL--- 237 +D+ Y FV + ++R+I D +DGRI TG +A K+G +D +G + ++ + Sbjct: 182 AIDNVYKQFVNDILKTRHISKDIIKKYADGRILTGEQALKLGFVDKIGTYYDAFEDMKKD 241 Query: 238 YALGVDQSIRKIKDWN 253 + LG D + ++KD N Sbjct: 242 FHLGEDVVLYEVKDKN 257 >gi|91205551|ref|YP_537906.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157827267|ref|YP_001496331.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] gi|91069095|gb|ABE04817.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157802571|gb|ABV79294.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] Length = 307 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 159/300 (53%), Gaps = 20/300 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVED----------NSPHVARIAIRGQIEDSQELIE 55 K+IK R ++ L+ + ++ S+ +D N ++A + I I + ++ + Sbjct: 12 KQIKARLLVWKLIAIILIGVSFFLICKDFVPTEVLANNNDDYIASVLIDDIILEDEKRDK 71 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 ++++I D ALIV+++SPGG+ E I+ + K+ +KPV+ + MAAS GYLIS Sbjct: 72 KLKKIVDDSHIKALIVNVNSPGGTVVGSEKIYNILLKISEKKPVVIVMGTMAASGGYLIS 131 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + I++ ++ GSIGV+ Q V KLG++ + KS +KA P+P ++ Sbjct: 132 LAGDYIISHNGTITGSIGVILQTAEVTDLAQKLGITFLNFKSGELKAAPNPTEKLTENVR 191 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + ++ +Y++F+ LV+E R IP D+ L+DGRI++G +A K+ L+D +G ++ + Sbjct: 192 VAVMENIEDTYNFFIELVAERRKIPIDEVKKLADGRIYSGRQAVKLKLVDNIGNEDTALK 251 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED---TIPLMKQTKVQGLWAVWN 292 L Q +KI K+Y L + +LED +P + G+ A+ N Sbjct: 252 WL------QDEKKIDAKLTIKDYQLKPKPKL-VEMMLEDFDSLVPSFFKNSFNGIKAISN 304 >gi|198275373|ref|ZP_03207904.1| hypothetical protein BACPLE_01534 [Bacteroides plebeius DSM 17135] gi|198271709|gb|EDY95979.1| hypothetical protein BACPLE_01534 [Bacteroides plebeius DSM 17135] Length = 586 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 125/222 (56%), Gaps = 11/222 (4%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++ + + + +D + A+++ ++SPGGSAY E I+R + +K KPV+ + + AA Sbjct: 326 NSEKVTKDLRDLRKDKNVKAVVLRVNSPGGSAYGSEQIWREVTLLKAEKPVVVSMGDYAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF 167 S GY ISCA+N IVA T+L GSIG+ P L +KLG+ VK+ M S Sbjct: 386 SGGYYISCAANKIVAEPTTLTGSIGIFGMMPDASELLTNKLGLHFDGVKTHKMADMGSMS 445 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 N + +MQ +V+ Y F + +E RNIP ++ +++GR+WTG+ AK++ L+D + Sbjct: 446 RPFNAEESALMQQMVNQGYALFTKRCAEGRNIPLEELCKIAEGRVWTGSMAKELKLVDEL 505 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWN----PPKNYWFCDLKN 265 GG + Q LG K+KD+ P K + +L N Sbjct: 506 GGLDTAIQLAAELG------KVKDYKLKSYPAKQDFLTELLN 541 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 12/198 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I++ ++ + + + S + +AI RA+ K + +M Sbjct: 80 EDILNSIQKAKENEQIKGIYLHTGALACSTASLQAIHRALTDFKQSGKFLIAYADMYTQG 139 Query: 111 GY-LISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EP 164 GY L S A +IV + VGS+ G+ + ++K FL K+GV ++ + K+ EP Sbjct: 140 GYYLASVADKVIV----NPVGSLSWHGLASETMFLKDFLVKIGVKMQIFRVGTYKSAVEP 195 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVG 222 +E++P + Q ++S++ V V+ SRNI D +L+D + + G Sbjct: 196 MTNTEMSPANREQTQAFLESTWKSIVDDVAASRNISVDSLNLLADKNMDLRPAEDYVHCG 255 Query: 223 LIDVVGGQEEVWQSLYAL 240 L D + ++EV L +L Sbjct: 256 LADTLMYKDEVLSYLKSL 273 >gi|289549221|ref|YP_003474209.1| signal peptide peptidase SppA, 36K type [Thermocrinis albus DSM 14484] gi|289182838|gb|ADC90082.1| signal peptide peptidase SppA, 36K type [Thermocrinis albus DSM 14484] Length = 282 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 143/262 (54%), Gaps = 25/262 (9%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +A + + G I D Q ++ ++E+ D S AL++ + SPGGS A + I+R +++ + Sbjct: 33 RIAVVKVEGVITDPQAVVSKMEKARLDPSVKALVLRVESPGGSVGASQEIYREVERFRQS 92 Query: 97 -KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ + +AAS GY IS +N+I A ++ GSIGV+ Q+ V+ L+KLG+ ++ Sbjct: 93 GKPVVVSMGNVAASGGYYISAPANVIYANPGTITGSIGVIIQHTDVQQLLEKLGIKTTAI 152 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIW 213 K+ K SPF E+ P+ Q +Q++V+ +Y F+ + R + D ++DGRI Sbjct: 153 KTGKFKDTLSPFRELTPEERQYLQNLVEDAYSQFIEAILRYRKGKVQEDILRQIADGRIL 212 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKNYWFCDLKNLSISSL 271 TG +AK++GL+D +G ++ +I+K K+ P ++ + K + + Sbjct: 213 TGKQAKELGLVDELGDLQD------------AIQKAKELARVPQARVFYMEDKKGFLKRM 260 Query: 272 LEDTIPLMKQTKVQGLWAVWNP 293 LE +P ++Q VW+P Sbjct: 261 LEGKVPSLQQ--------VWSP 274 >gi|239947709|ref|ZP_04699462.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921985|gb|EER22009.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] Length = 304 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 122/202 (60%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 H+ N ++A + I I + ++ +++++I D ALIV+++SPGG+ E I+ Sbjct: 47 HINSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNI 106 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ +KPV+ + +AAS GYLIS + IV+ ++ GSIGV+ Q V KLG Sbjct: 107 LRKISEKKPVVIVMGTIAASGGYLISLGGDYIVSHNGTITGSIGVILQTAEVTELAQKLG 166 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + KS +KA P+P ++ + + ++ +Y++F+ LVSE RN+P ++ L+D Sbjct: 167 IKFNNFKSGELKAVPNPTEKLTEAVRVAIMENIEDTYNFFLELVSERRNLPIEEVKKLAD 226 Query: 210 GRIWTGAEAKKVGLIDVVGGQE 231 GR+++G +A K+ L+D +G ++ Sbjct: 227 GRVYSGRQALKLKLVDAIGSED 248 >gi|189466890|ref|ZP_03015675.1| hypothetical protein BACINT_03271 [Bacteroides intestinalis DSM 17393] gi|189435154|gb|EDV04139.1| hypothetical protein BACINT_03271 [Bacteroides intestinalis DSM 17393] Length = 589 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 117/187 (62%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I + ++ ++ A+++ ++SPGGSA+ E I+ A+ ++K KPVI + + AA Sbjct: 329 NSEKVIRDLRKLKENEDVKAVVLRVNSPGGSAFGSEQIWYAVTELKKEKPVIVSMGDYAA 388 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ +P VK DK+G+S VK++ Sbjct: 389 SGGYYISCNADSIVADPTTLTGSIGIFGMFPNVKGLTDKIGLSFDVVKTNTYSDFGMMGR 448 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ++V+ Y FV+ +E R + D+ +++GR+WTGA+AK++GL+D +G Sbjct: 449 ALNDGEKALMQNMVNEGYELFVKRCAEGRGMTTDEIKKIAEGRVWTGAKAKELGLVDELG 508 Query: 229 GQEEVWQ 235 G ++ + Sbjct: 509 GLDKALE 515 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 44/203 (21%), Positives = 91/203 (44%), Gaps = 7/203 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ +++ + + S G + E I +A+ K K V+ + + Sbjct: 80 DDILSSIQKAKDNENIKGIYLQAGSMGAGFASIEEIRKALADFKTSGKFVVAYGDQYSQR 139 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 YL S A +I+ + S +G G+ + K L K+GV ++ K K+ PF Sbjct: 140 LYYLASVADKVILNPQGS-IGWYGLASTPVFYKDLLSKIGVEMQVFKVGTYKSAVEPFIS 198 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLID 225 +E++P + + +D + + +SESR + +K +D + + + + GL D Sbjct: 199 TEMSPANREQVTVFLDGIWGQMLGDISESRGVSKEKLNEAADKMLMFYPAEDCVEYGLAD 258 Query: 226 VVGGQEEVWQSLYAL-GVDQSIR 247 + + +V L L G+D+ R Sbjct: 259 TLIYKNDVRNYLKTLIGIDEDDR 281 >gi|237756040|ref|ZP_04584621.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium yellowstonense SS-5] gi|237691807|gb|EEP60834.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium yellowstonense SS-5] Length = 274 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 131/231 (56%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 + +++ ++ L V+++ S+ ++ P V I I G I D + + I + ++D+S A++ Sbjct: 3 KKILIGIIALIVIFYVISALRYESQPKVGLIRIEGTITDYLDTVSIISQATKDESIKAVV 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG+ A + I+RAI+K++ +KPV+ + +AAS GY IS +N+I A ++ G Sbjct: 63 IDVDSPGGAVGASQEIYRAIEKLREKKPVVVSMGNVAASGGYYISAPANVIYANPGTITG 122 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ Q+ V L+K GV + ++KS K P + P+ +++ V Y F+ Sbjct: 123 SIGVIIQHVDVSEILNKFGVKVNTIKSGANKDILYPTKPLLPEQKALLEKTVMDVYDQFL 182 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + + R I D +DGR+++G EAK +GL+D +G ++ LG Sbjct: 183 DAIVKYRPIKKDILKSYADGRVFSGNEAKALGLVDKIGNIQDAISEAKKLG 233 >gi|229586788|ref|YP_002845289.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] gi|228021838|gb|ACP53546.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] Length = 304 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 135/237 (56%), Gaps = 11/237 (4%) Query: 6 KKIKTRYVM--LSLVTLTVVYFSWSSH---------VEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R ++ L+ + L + F + N ++A + I I + ++ Sbjct: 12 RQIKSRLLIWKLTAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRD 71 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + MAAS GYLI Sbjct: 72 KKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNILRKISAKKPVVIVMGTMAASGGYLI 131 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + I++ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 132 SLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + D ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 192 RIAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSED 248 >gi|157828572|ref|YP_001494814.1| protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933286|ref|YP_001650075.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] gi|2944013|gb|AAC05202.1| putative protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|2970341|gb|AAC05973.1| putative protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801053|gb|ABV76306.1| protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908373|gb|ABY72669.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] Length = 304 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 121/201 (60%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 INSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MAAS GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 108 RKISAKKPVVIVMGTMAASGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + D ++ +Y++F+ LVSE RN+P ++ L+DG Sbjct: 168 KFNNFKSGELKAVPNPTEKLTEAVRVAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQE 231 R+++G +A K+ L+D +G ++ Sbjct: 228 RVYSGRQALKLKLVDAIGSED 248 >gi|15892681|ref|NP_360395.1| protease IV [Rickettsia conorii str. Malish 7] gi|15619853|gb|AAL03296.1| protease IV [Rickettsia conorii str. Malish 7] Length = 304 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 121/201 (60%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 INSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MAAS GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 108 RKISAKKPVVIVMGTMAASGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + D ++ +Y++F+ LVSE RN+P ++ L+DG Sbjct: 168 KFNNFKSGELKAVPNPTEKLTEAVRVAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQE 231 R+++G +A K+ L+D +G ++ Sbjct: 228 RVYSGRQALKLKLVDAIGSED 248 >gi|158335227|ref|YP_001516399.1| signal peptide peptidase SppA [Acaryochloris marina MBIC11017] gi|158305468|gb|ABW27085.1| signal peptide peptidase SppA, 36K type [Acaryochloris marina MBIC11017] Length = 315 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 142/277 (51%), Gaps = 25/277 (9%) Query: 10 TRYVMLSLVTLTVVYF-------SWSSHVEDNSPHVARIAIRGQIED------------- 49 R + L+LVTL ++ S + + S +VA+I + G I D Sbjct: 4 NRVLALALVTLCLIAALGNWLGGSVNKSKDQGSANVAQINVYGVISDEASGGPFSSGEGA 63 Query: 50 -SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + +LI I++ DD A+++ ++SPGG+A A +A++ + + + ++ + ++ Sbjct: 64 NANKLISNIKKAREDDGIKAILLRINSPGGTAAASQAVYEELMRTRKDTDIKIVASLGDV 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+ A++ IVA +S+ GSIGV+ Q V LDK+GV + S P+K SP Sbjct: 124 AASGGYYIASAADHIVANPSSITGSIGVIVQTQNVTSLLDKVGVQTNTFTSGPLKDILSP 183 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F E P+ +++Q +VD SY F+ + R +P +K L+DGRI+TG +AK L+D Sbjct: 184 FRETKPEERKILQSIVDDSYQQFLDAIVAGRGMPLEKLKPLADGRIYTGTQAKDNKLVDS 243 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 +G + L K+KD+ K F D Sbjct: 244 LGNYYDALDKTAELANISGDPKVKDFG--KGSLFGDF 278 >gi|148284225|ref|YP_001248315.1| periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] gi|146739664|emb|CAM79457.1| Periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] Length = 302 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSP------HVARIAIRGQIEDSQELIERIERISRDD 64 + + L L+T VV F + + V SP ++A I I I D +L + +I DD Sbjct: 22 KILTLLLITAIVVLFIFRNRV-GYSPSLATGDYIANIQIDDLIYDDIKLNNLLHQIKNDD 80 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A ALI+ + SPGG+ E I+ ++ + N KPV+ + +AAS GYL++ A++ I+A Sbjct: 81 KAKALILHIDSPGGTVAGSEKIYGILRSISNSKPVVAVLGTVAASGGYLVALAADYIIAQ 140 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++++ GSIG++ P + F +K+G+ + KS +KA PS +V P + +++ Sbjct: 141 KSTVTGSIGIVHFSPEITEFGEKIGIKFHTFKSGELKAAPSLTEKVTPAVHEATMTLIND 200 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV---WQSLYALG 241 Y +FV LV+E R + ++ L ++DG+ +TG +A + LID +G E+ Q L Sbjct: 201 MYDFFVELVAERRQMSPEQVLKVADGKAYTGRQALSLNLIDALGTTEDALSWLQQEKKLS 260 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 +D + ++ N Y I L + L +K+ G+ A++ Sbjct: 261 LDLRVIELHTQNKLAGY---------IKLLQNNMHKLFFGSKINGVMALY 301 >gi|224536205|ref|ZP_03676744.1| hypothetical protein BACCELL_01072 [Bacteroides cellulosilyticus DSM 14838] gi|224522189|gb|EEF91294.1| hypothetical protein BACCELL_01072 [Bacteroides cellulosilyticus DSM 14838] Length = 589 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 115/187 (61%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S ++I + ++ D A+++ ++SPGGSA+ E I+ A+ ++K KPVI + + AA Sbjct: 329 NSDKVIRDLRKLKDDKDVKAVVLRVNSPGGSAFGSEQIWYAVTELKKEKPVIVSMGDYAA 388 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ +P VK DK+G+S VK++ + Sbjct: 389 SGGYYISCNADSIVADPTTLTGSIGIFGMFPNVKGLTDKIGLSFDVVKTNTYADFGAMGR 448 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ++V+ Y FV+ +E R + D+ +++GR+WTG +AK++GL+D +G Sbjct: 449 PLNDGEKALMQNMVNEGYELFVKRCAEGRGMTTDEIKKIAEGRVWTGTKAKELGLVDELG 508 Query: 229 GQEEVWQ 235 G ++ + Sbjct: 509 GLDKALE 515 >gi|253565829|ref|ZP_04843283.1| protease IV [Bacteroides sp. 3_2_5] gi|251944933|gb|EES85371.1| protease IV [Bacteroides sp. 3_2_5] gi|301164217|emb|CBW23775.1| putative protease IV [Bacteroides fragilis 638R] Length = 592 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 111/178 (62%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ DD A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVKELKAKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISCA++ I+A T+L GSIG+ P VK +K+G++ VK++ + VN Sbjct: 395 YYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++Q ++ Y FV +E R++ DK +++GR+WTG AKK+GL+D +GG Sbjct: 455 SDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGRVWTGEMAKKIGLVDELGG 512 >gi|53714736|ref|YP_100728.1| protease IV [Bacteroides fragilis YCH46] gi|52217601|dbj|BAD50194.1| protease IV [Bacteroides fragilis YCH46] Length = 592 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 111/178 (62%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ DD A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVKELKAKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISCA++ I+A T+L GSIG+ P VK +K+G++ VK++ + VN Sbjct: 395 YYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++Q ++ Y FV +E R++ DK +++GR+WTG AKK+GL+D +GG Sbjct: 455 SDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGRVWTGEMAKKIGLVDELGG 512 >gi|255011818|ref|ZP_05283944.1| putative protease IV [Bacteroides fragilis 3_1_12] gi|313149656|ref|ZP_07811849.1| protease IV [Bacteroides fragilis 3_1_12] gi|313138423|gb|EFR55783.1| protease IV [Bacteroides fragilis 3_1_12] Length = 592 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 111/178 (62%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ DD A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVKELKAKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISCA++ I+A T+L GSIG+ P VK +K+G++ VK++ + VN Sbjct: 395 YYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++Q ++ Y FV +E R++ DK +++GR+WTG AKK+GL+D +GG Sbjct: 455 SDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGRVWTGEMAKKIGLVDELGG 512 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/193 (20%), Positives = 83/193 (43%), Gaps = 4/193 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +D+ + + S S + +AI +A+ K + + Sbjct: 84 DILASIKKAKENDNIKGIYIQASWLDASYASLQAIRKALDDFKESGKFVVAYSDNYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ PF +E Sbjct: 144 YYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVEPFTATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S ++ + VS SR I D + +D + + E+ K GL D + Sbjct: 204 MSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKCGLADTL 263 Query: 228 GGQEEVWQSLYAL 240 Q +V L L Sbjct: 264 IYQNDVRDYLKTL 276 >gi|265766569|ref|ZP_06094398.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_16] gi|263252946|gb|EEZ24422.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_16] Length = 592 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 111/178 (62%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ DD A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVKELKAKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISCA++ I+A T+L GSIG+ P VK +K+G++ VK++ + VN Sbjct: 395 YYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++Q ++ Y FV +E R++ DK +++GR+WTG AKK+GL+D +GG Sbjct: 455 SDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGRVWTGEMAKKIGLVDKLGG 512 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 4/193 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ DD+ + + S S + +AI +A+ K + + Sbjct: 84 DILASIKKAKEDDNIKGIYIQASWLDASYASLQAIRKALDDFKESGKFVVAYSDNYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ PF +E Sbjct: 144 YYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVEPFTATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S ++ + VS SR I D + +D + + E+ K GL D + Sbjct: 204 MSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKCGLADTL 263 Query: 228 GGQEEVWQSLYAL 240 Q +V L L Sbjct: 264 IYQNDVRDYLKTL 276 >gi|60682742|ref|YP_212886.1| putative protease IV [Bacteroides fragilis NCTC 9343] gi|60494176|emb|CAH08968.1| putative protease IV [Bacteroides fragilis NCTC 9343] Length = 592 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 111/178 (62%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ DD A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVKELKAKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISCA++ I+A T+L GSIG+ P VK +K+G++ VK++ + VN Sbjct: 395 YYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++Q ++ Y FV +E R++ DK +++GR+WTG AKK+GL+D +GG Sbjct: 455 SDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGRVWTGEMAKKIGLVDELGG 512 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 4/193 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ DD+ + + S S + +AI +A+ K + + Sbjct: 84 DILASIKKAKEDDNIKGIYIQASWLDASYASLQAIRKALDDFKESGKFVVAYSDNYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ PF +E Sbjct: 144 YYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVEPFTATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S ++ + VS SR I D + +D + + E+ K GL D + Sbjct: 204 MSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKCGLADTL 263 Query: 228 GGQEEVWQSLYAL 240 Q +V L L Sbjct: 264 IYQNDVRDYLKTL 276 >gi|67459158|ref|YP_246782.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] gi|67004691|gb|AAY61617.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] Length = 304 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 144/264 (54%), Gaps = 10/264 (3%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 INSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MAAS GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 108 RKISEKKPVVIVMGTMAASGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + + ++ +Y++F+ LVSE RN+P ++ L+DG Sbjct: 168 KFNNFKSGELKAVPNPTEKLTEAVRVAIMENIEDTYNFFLELVSERRNLPIEEVKKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R+++G +A K+ L+D +G ++ + L Q ++KI K+Y L I Sbjct: 228 RVYSGRQALKLKLVDAIGSEDTALKWL------QEVKKINANLLVKDYQLKPKPKL-IDI 280 Query: 271 LLED---TIPLMKQTKVQGLWAVW 291 +LED P + G+ A++ Sbjct: 281 ILEDFDSIAPSFFKNSFNGIKAIF 304 >gi|34581630|ref|ZP_00143110.1| protease IV [Rickettsia sibirica 246] gi|28263015|gb|EAA26519.1| protease IV [Rickettsia sibirica 246] Length = 304 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 120/201 (59%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 INSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 108 RKISAKKPVVIVMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + D ++ +Y++F+ LVSE RN+P ++ L+DG Sbjct: 168 KFNNFKSGELKAVPNPTEKLTEAVRVAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQE 231 R+++G +A K+ L+D +G ++ Sbjct: 228 RVYSGRQALKLKLVDAIGSED 248 >gi|58038620|ref|YP_190584.1| protease IV [Gluconobacter oxydans 621H] gi|58001034|gb|AAW59928.1| Protease IV [Gluconobacter oxydans 621H] Length = 278 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 118/199 (59%), Gaps = 1/199 (0%) Query: 34 NSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + PH+ R+AI G I+ D + + +++ T L++ + SPGG GE + A+++ Sbjct: 14 HRPHIVRLAISGIIKNDVSQTVRALKQAREASDVTGLLLVVDSPGGGVTGGERLHEAVKR 73 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 KPV + ++ ASA Y++S + IVA ++L GSIGVLFQ P V L +LG+ + Sbjct: 74 FAAVKPVAVSMGDVGASAAYMLSVPAQHIVALPSTLTGSIGVLFQRPDVSVGLGRLGIGM 133 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++ S MK + P S + P+ QM+Q +V+ + FV +V+E R++ +K L+DGR Sbjct: 134 DAITSGAMKDQTDPTSALTPEGRQMLQGLVNDLFGQFVSMVAEGRHLSEEKVRSLADGRA 193 Query: 213 WTGAEAKKVGLIDVVGGQE 231 +TG +A +GL+D +G ++ Sbjct: 194 YTGRQAIALGLVDELGDED 212 >gi|157964584|ref|YP_001499408.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] gi|157844360|gb|ABV84861.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] Length = 305 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 121/201 (60%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 49 INSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNIL 108 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MAAS GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 109 RKISAKKPVVIVMGTMAASGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 168 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + + ++ +Y++F+ LVSE RN+P ++ L+DG Sbjct: 169 KFNNFKSGELKAVPNPTEKLTEAVRVTIMENIEDTYNFFLELVSERRNLPIEEVKKLADG 228 Query: 211 RIWTGAEAKKVGLIDVVGGQE 231 R+++G +A K+ L+D +G ++ Sbjct: 229 RVYSGRQALKLKLVDAIGSED 249 >gi|284929652|ref|YP_003422174.1| signal peptide peptidase A [cyanobacterium UCYN-A] gi|284810096|gb|ADB95793.1| signal peptide peptidase A [cyanobacterium UCYN-A] Length = 272 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 148/261 (56%), Gaps = 9/261 (3%) Query: 35 SPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + +ARI I+G I E + L+E +E + ++ AL++ + SPGG+ + I+ A++K Sbjct: 10 TKQIARIEIKGVINSETRKFLLEALETV-KEKKFPALLLRIDSPGGTVGDSQEIYEALKK 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G IS + I+A ++ GSIGV+ + K L+K+GVS Sbjct: 69 LQKKTKIVATFGNISASGGVYISMGAPYIMANPGTITGSIGVILRGNNFKELLNKIGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + VKS P K S +++P+ +++Q+++D SY F+ +S+ RN+ DKT +DGRI Sbjct: 129 QVVKSGPYKDILSFDRQLSPEEEKILQEMIDISYQQFITTISKERNLDMDKTKSFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEE--VWQSLYALGVDQSIRK---IKDWNPPKNYWFCDLKNLS 267 +TG +A K+G++D +G +E+ W + +G+D K I++ P N F N S Sbjct: 189 FTGEQALKLGMVDRLGSEEDARCWAA-ELVGLDPEKTKCFTIEESKPFLNRIFSKNNNKS 247 Query: 268 ISSLLEDTIPLMKQTKVQGLW 288 +L+ D I +T Q LW Sbjct: 248 KFTLMNDRIEFELKTSGQLLW 268 >gi|189182992|ref|YP_001936777.1| protease IV [Orientia tsutsugamushi str. Ikeda] gi|189179763|dbj|BAG39543.1| protease IV [Orientia tsutsugamushi str. Ikeda] Length = 302 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 130/228 (57%), Gaps = 7/228 (3%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSP------HVARIAIRGQIEDSQELIERIERISRDD 64 + + L L+T VV F + + V SP ++A I I I D +L + +I DD Sbjct: 22 KILTLLLITAIVVLFIFRNRV-GYSPSLATGDYIANIQIDDLIYDDIKLNNLLHQIKNDD 80 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A ALI+ + SPGG+ E I+ ++ + N KPV+ + +AAS GYL++ A++ I+A Sbjct: 81 KAKALILHVDSPGGTVAGSEKIYGILRSISNSKPVVAVLGTVAASGGYLVALAADYIIAQ 140 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++++ GSIG++ P + F +K+G+ + KS +KA PS +V P + +++ Sbjct: 141 KSTVTGSIGIVHFSPEITEFGEKIGIKFHTFKSGELKAAPSLTEKVTPAVHEATMTLIND 200 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Y +FV LV+E R + ++ L ++DG+ +TG +A + LID +G E+ Sbjct: 201 MYDFFVELVAERRQMSPEQVLKVADGKAYTGRQALSLNLIDALGTTED 248 >gi|188996018|ref|YP_001930269.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium sp. YO3AOP1] gi|188931085|gb|ACD65715.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium sp. YO3AOP1] Length = 274 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 130/231 (56%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 + +++ ++ L V+++ S+ ++ P V I I G I D + + I ++D+S A++ Sbjct: 3 KKILIGIIALIVIFYIISALRYESQPKVGLIRIEGTIVDYLDTVSIISEATKDESIKAVV 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG+ A + I+RAI+K++ +KPV+ + +AAS GY IS +N+I + ++ G Sbjct: 63 IDVDSPGGAVGASQEIYRAIEKLREKKPVVVSMGNVAASGGYYISTPANVIYSNPGTITG 122 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ Q+ V L+K GV + ++KS K P + P+ +++ V Y F+ Sbjct: 123 SIGVIIQHVDVSEILNKFGVKVNTIKSGANKDILYPTKPLLPEQKALLEKTVMDVYDQFL 182 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ R I D +DGR+++G EAK +GL+D +G ++ LG Sbjct: 183 DAIARYRPIKKDVLKSYADGRVFSGNEAKALGLVDKIGNIQDAISEAKKLG 233 >gi|120601287|ref|YP_965687.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris DP4] gi|120561516|gb|ABM27260.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfovibrio vulgaris DP4] Length = 296 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 135/249 (54%), Gaps = 9/249 (3%) Query: 17 LVTLTVVYFSWSS----HVED----NSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 L+ + V F+ ++ H+ D P + + I G I D+++ +E + +++ D + Sbjct: 21 LIMVAVALFTGATATFRHLTDAGSFGGPRIGIVRIEGMIGDARKTLEWMRKLAEDRTVRG 80 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++V + SPGG+ + + A++++ KPV+ + +AAS G ++S + IVA ++ Sbjct: 81 VLVRVDSPGGAVAPSQELHDAVKRLAADKPVVVSMGSLAASGGLMVSTGATRIVANPATI 140 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV + P V+ +DKLGV+ +++ S +K SPF ++ Q ++ Y Sbjct: 141 TGSIGVKMEMPNVQGLMDKLGVARQTLVSGDLKDAGSPFRAMSEAERAYFQSIIMEMYGQ 200 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV +++E RNIP +K +DGRI TG++A ++GL+D +G + L AL VD K Sbjct: 201 FVSMIAEDRNIPVEKVRSFADGRILTGSQALELGLVDKLGSEAAAMDVLLAL-VDLKGEK 259 Query: 249 IKDWNPPKN 257 PPK Sbjct: 260 PVFIEPPKE 268 >gi|298372905|ref|ZP_06982895.1| signal peptide peptidase SppA, 67K type [Bacteroidetes oral taxon 274 str. F0058] gi|298275809|gb|EFI17360.1| signal peptide peptidase SppA, 67K type [Bacteroidetes oral taxon 274 str. F0058] Length = 582 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 126/213 (59%), Gaps = 8/213 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGS 79 S H + +A + G+I+ +SQ++++ + ++ DD A+++ ++SPGGS Sbjct: 294 SKHKSRSKNKIAVLYAVGEIDGSDERSGINSQKIVDELIDLADDDKIKAVVLRVNSPGGS 353 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+ E I++A+ KVK RKPV+ + + AAS GY ISC ++ I A T+L GSIG+ +P Sbjct: 354 AFGSEQIWQAVGKVKARKPVVVSMGDYAASGGYYISCIADRIFAEPTTLTGSIGIFGMFP 413 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S +SVK++ + + + + ++Q ++ Y F + ++ R + Sbjct: 414 NVKGLFDKIGLSFESVKTNKFSDFGATYRPMAAEEKVLLQKYIEKGYDLFTKRCADGRGM 473 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 D +++GRI++G++A ++GL+D +GG E Sbjct: 474 SQDSIKKIAEGRIYSGSDALQLGLVDELGGLNE 506 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 16/221 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++E IE+ + +D + + + + S + + I+R + + K I + + Sbjct: 84 DIVESIEKAAGEDKIKGIYLKIGNLSASMASLQQIYRCLGQFKKSGKFIVAYGDYYGNGT 143 Query: 112 Y-LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y L S A + + E +L S G+ + K LDKLGV ++ K K+ PF++ Sbjct: 144 YYLASIADKVYLNPEGTLALS-GLQASTMFYKNLLDKLGVDMQIFKVGTFKSAVEPFTQT 202 Query: 171 NPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLIDV 226 + +Q ++S + V+++R D +D ++ G E K LID Sbjct: 203 SMSEANKLQLTAYINSLWKEITTSVAQNRATTVDNINAFADSGLFFGEAMETVKYKLIDS 262 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + Q ++ + AL V KD++ D+KN+S Sbjct: 263 LVYQSDMDSIIKALTV-------KDYHTAS---LDDIKNVS 293 >gi|15604382|ref|NP_220898.1| protease IV (sppA) [Rickettsia prowazekii str. Madrid E] gi|3861074|emb|CAA14974.1| PROTEASE IV (sppA) [Rickettsia prowazekii] gi|292572137|gb|ADE30052.1| Signal peptide peptidase SppA 36K type [Rickettsia prowazekii Rp22] Length = 305 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/228 (31%), Positives = 129/228 (56%), Gaps = 6/228 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I G I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 INSNEDYIASVLIDGIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 108 RKISAKKPVVVIMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS KA P+P ++ + + ++ +Y +F+ LVSE R++P ++ L+DG Sbjct: 168 KFNNFKSGAFKAVPNPTEKLTEAVRLAIMENIEDTYKFFIELVSERRSLPIEEVQKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 R+++G +A K+ L+D +G ++ + L Q I+KI K+Y Sbjct: 228 RVYSGRQALKLRLVDTIGSEDTALKWL------QEIKKININLTIKDY 269 >gi|196018409|ref|XP_002118798.1| hypothetical protein TRIADDRAFT_62805 [Trichoplax adhaerens] gi|190578184|gb|EDV18716.1| hypothetical protein TRIADDRAFT_62805 [Trichoplax adhaerens] Length = 783 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 119/180 (66%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++QE+I+ + +++ D++ A++V+++S GG+ GE+++R ++++ KPV+ + E+ A Sbjct: 587 ENQEMIKSLNKLANDNNVKAVLVNINSTGGTGAGGESLYRELRRIAKNKPVVASIGEIGA 646 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SAGY+++ ++ I A + SLVGSIGV+ + K G++++ +KSSP+K P+ F Sbjct: 647 SAGYMVALGTDRIFAYDISLVGSIGVIIMNFEINELAKKHGINLELIKSSPLKGVPNYFE 706 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++ + + +Q++ + S +F++LV RN+ + +S+G+I+ G +A K+ LID VG Sbjct: 707 KLDNQQKEYVQNLANESNQYFIKLVKNRRNLSEEDLKAVSNGKIFIGTKAMKLKLIDQVG 766 >gi|51473706|ref|YP_067463.1| protease IV [Rickettsia typhi str. Wilmington] gi|51460018|gb|AAU03981.1| probable protease IV [Rickettsia typhi str. Wilmington] Length = 304 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 138/249 (55%), Gaps = 7/249 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A + I G I + ++ +++++I + ALIV+++SPGG+ E I+ + Sbjct: 48 INSNEDYIASVLIDGIILEDEKRDKKLKKIIDNSHIKALIVNVNSPGGTVVGSEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q V KLG+ Sbjct: 108 RKISAKKPVVVVMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS KA P+P ++ + + + ++ +Y +F+ LVSE R++P ++ L+DG Sbjct: 168 KFNNFKSGAFKAVPNPTEKLTEEVRVAVMENIEDTYKFFIELVSERRSLPIEEVHKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R+++G +A K+ L+D +G ++ + L Q I+KI D N + K+ I Sbjct: 228 RVYSGRQAFKLRLVDTIGSEDTALKWL------QEIKKI-DINLTVKDYQLKPKSTLIEI 280 Query: 271 LLEDTIPLM 279 + ED L+ Sbjct: 281 MFEDFTSLV 289 >gi|221633251|ref|YP_002522476.1| protease IV, signal peptide peptidase [Thermomicrobium roseum DSM 5159] gi|221155784|gb|ACM04911.1| protease IV, signal peptide peptidase [Thermomicrobium roseum DSM 5159] Length = 321 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 135/243 (55%), Gaps = 20/243 (8%) Query: 34 NSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 PHVA I +RG I ++ ++E++ER ++ +A +++ + SPGG Sbjct: 44 EQPHVAEIRVRGPIALRGGAGLLTGESASAERIVEQLERARQNPNARVVLLRVDSPGGGV 103 Query: 81 YAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A I+ A+++V+ + KPV+ + AAS GY IS ++ IVA ++ GSIGV+ P Sbjct: 104 NAAREIWAAVRRVQESGKPVVAFFEDTAASGGYYISAPADRIVAMPDTITGSIGVILIIP 163 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + +KLG+ ++ VKS K S + P+ +++ +V +Y FVR+V+E R + Sbjct: 164 DLSGLYEKLGIRMQVVKSGTFKDMASSDRPLTPEERALLEQLVHEAYDEFVRVVAEGRAM 223 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE---VWQSLYALGVDQSIRKIKDWNPPK 256 P ++ L+DGRI+TG +AK++GL+D +GG + V L LG + ++R + P Sbjct: 224 PPERVRELADGRIYTGRQAKELGLVDELGGYRDALAVAGQLAGLGAEPAVRV---YRPQP 280 Query: 257 NYW 259 +W Sbjct: 281 TFW 283 >gi|329957885|ref|ZP_08298360.1| signal peptide peptidase SppA [Bacteroides clarus YIT 12056] gi|328522762|gb|EGF49871.1| signal peptide peptidase SppA [Bacteroides clarus YIT 12056] Length = 588 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 119/196 (60%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I+ + ++ D++ A+++ ++SPGGSAY E I+ A+ ++K KPVI + + AA Sbjct: 328 NSEKVIKDLRKLKDDENVKAVVLRVNSPGGSAYGSEQIWYAVNQLKKEKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+C ++ IVA T+L GSIG+ P K +KLGV+ VK++P + Sbjct: 388 SGGYYIACNADTIVAEPTTLTGSIGIFGMMPNAKGLTEKLGVNFDVVKTNPYADFGNLTR 447 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V+ Y F+ S+ R I ++ ++ GR+WTG+ AK++GL+D +G Sbjct: 448 PMNDGEKGLMQMYVNKGYELFLTRCSDGRGISMEELDKIAQGRVWTGSTAKELGLVDELG 507 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ + ++ GVD Sbjct: 508 GLDKALEIAIAKAGVD 523 >gi|167764531|ref|ZP_02436652.1| hypothetical protein BACSTE_02920 [Bacteroides stercoris ATCC 43183] gi|167697200|gb|EDS13779.1| hypothetical protein BACSTE_02920 [Bacteroides stercoris ATCC 43183] Length = 540 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 120/196 (61%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I+ + ++ +++ A+++ ++SPGGSAY E I+ A+ ++K KPVI + + AA Sbjct: 280 NSEKVIKDLRKLKDNENVKAVVLRVNSPGGSAYGSEQIWYAVNQLKKEKPVIVSMGDYAA 339 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ P K +KLGV+ VK++P + Sbjct: 340 SGGYYISCNADTIVAEPTTLTGSIGIFGMMPNAKGLTEKLGVNFDVVKTNPYADFGNLTR 399 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V++ Y F+ S+ R I ++ ++ GR+WTG+ AK++GL+D +G Sbjct: 400 PMNDGEKGLMQMYVNNGYELFLTRCSDGRGISMEELDKIAQGRVWTGSTAKELGLVDELG 459 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ + ++ GVD Sbjct: 460 GLDKALEIAIAKAGVD 475 >gi|46581551|ref|YP_012359.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. Hildenborough] gi|46450973|gb|AAS97619.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. Hildenborough] gi|311235195|gb|ADP88049.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris RCH1] Length = 296 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 134/249 (53%), Gaps = 9/249 (3%) Query: 17 LVTLTVVYFSWSS----HVED----NSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 L+ + V F+ ++ H+ D P + + I G I D ++ +E + +++ D + Sbjct: 21 LIMVAVALFTGATATFRHLTDAGSFGGPRIGIVRIEGMIGDVRKTLEWMRKLAEDRTVRG 80 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++V + SPGG+ + + A++++ KPV+ + +AAS G ++S + IVA ++ Sbjct: 81 VLVRVDSPGGAVAPSQELHDAVKRLAADKPVVVSMGSLAASGGLMVSTGATRIVANPATI 140 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV + P V+ +DK+GV+ +++ S +K SPF ++ Q ++ Y Sbjct: 141 TGSIGVKMEMPNVQGLMDKIGVARQTLVSGDLKDAGSPFRAMSEAERAYFQSIIMEMYGQ 200 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV +++E RNIP +K +DGRI TG++A ++GL+D +G + L AL VD K Sbjct: 201 FVSMIAEDRNIPVEKVRSFADGRILTGSQALELGLVDKLGSEAAAMDVLLAL-VDLKGEK 259 Query: 249 IKDWNPPKN 257 PPK Sbjct: 260 PVFIEPPKE 268 >gi|163783733|ref|ZP_02178719.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] gi|159880979|gb|EDP74497.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] Length = 264 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 VA I I+G I + + +IER+ +D S AL++ + SPGGS A + I+RAI++ K Sbjct: 14 RVAIINIKGVIVNPIPTVRKIERLRKDKSVKALVIRVDSPGGSVGASQEIYRAIERFKAE 73 Query: 97 -KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ + +AAS GY +S ++ I+A ++ GSIGV+ Q+ + ++K+GV ++ Sbjct: 74 GKPVVVSMGNVAASGGYYVSAPADYILANPGTITGSIGVIIQHVAYRELMEKIGVKATAI 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIW 213 K+ K +PF E+ P+ + +Q+ + +Y F++ + + R I +K ++DGR+ Sbjct: 134 KTGKFKDTLNPFRELTPEEKEYLQETIGEAYEQFLKAILKYRGNKIGEEKLRSVADGRVL 193 Query: 214 TGAEAKKVGLIDVVGGQEEVWQ 235 TG AK++GL+D +GG E+ Q Sbjct: 194 TGERAKELGLVDELGGIEDAVQ 215 >gi|116749550|ref|YP_846237.1| signal peptide peptidase SppA, 36K type [Syntrophobacter fumaroxidans MPOB] gi|116698614|gb|ABK17802.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Syntrophobacter fumaroxidans MPOB] Length = 290 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 121/208 (58%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S + + I+G I ++ E+++ I+ +D S A++V + SPGG + I+R +++ Sbjct: 33 GSNRIGVVEIKGTISNASEVLKSIKEFRKDQSIRAILVRIDSPGGGVGPSQEIYRELKRT 92 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPV+ + +AAS GY I+ A+N IVA+ ++ GSIGV+ P ++ K+G + Sbjct: 93 IKHKPVVASLGGIAASGGYYIASAANRIVASPGTITGSIGVIMYLPMLRDLFGKIGYEMV 152 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++K+ K +P E+ P+ ++MQ +D ++ F+R V+ R +P +K ++DGRI Sbjct: 153 TIKAGRYKDIGNPGREMTPEEKEIMQASMDEAHRQFIRDVAAGRKMPEEKIREIADGRII 212 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G AK++GL+D +G E+ + ALG Sbjct: 213 LGQTAKELGLVDELGNFEDAVDAAVALG 240 >gi|157803726|ref|YP_001492275.1| cytidylate kinase [Rickettsia canadensis str. McKiel] gi|157784989|gb|ABV73490.1| cytidylate kinase [Rickettsia canadensis str. McKiel] Length = 305 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 119/201 (59%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A I I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 ITGNEDYIASILIDEIIFEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q + KLG+ Sbjct: 108 RKISEKKPVVIVMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEITELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + + ++ +Y +F+ LVSE RN+P ++ L+DG Sbjct: 168 KFNNFKSGELKAAPNPTEKLTQAVRIAIMENIEDTYDFFLELVSERRNLPIEEVKKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQE 231 R+++G +A K+ L+D +G ++ Sbjct: 228 RVYSGRQALKLKLVDSIGSED 248 >gi|270294203|ref|ZP_06200405.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D20] gi|270275670|gb|EFA21530.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D20] Length = 589 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 DS+++I+ + ++ D+ A+++ ++SPGGSAY E I+ A+ ++K KPVI + + AA Sbjct: 329 DSKKVIKDLRKLKDDEDVKAVVLRVNSPGGSAYGSEQIWYAVSELKKEKPVIVSMGDYAA 388 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ +P K DK+GV+ VK++ Sbjct: 389 SGGYYISCNADTIVAEPTTLTGSIGIFGMFPNAKGLTDKIGVNFDVVKTNKYADFGMLTR 448 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V++ Y F+ S+ R I + ++ GR+WTG++AK++GL+D +G Sbjct: 449 PMNDGEKGLMQMYVNNGYDLFLTRCSDGRGISKEDLDKIAQGRVWTGSKAKELGLVDELG 508 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ ++ GVD Sbjct: 509 GLDKALDIAIAKAGVD 524 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 89/202 (44%), Gaps = 5/202 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I++ +D + + +S G + E I A++ K I + + Sbjct: 80 DDILSSIKKAKENDDIKGIYIEATSLGAGFASREEIRNALKDFKESGKFIVAYGDSYSQG 139 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y +S ++ ++ +V G+ + K L K+GV ++ K K+ PF + Sbjct: 140 LYYLSSVADKVLLNPQGMVEWRGLAATPMFFKDLLAKIGVEMQIFKVGTYKSAVEPFIST 199 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDV 226 E++P + + + S + V+ESR I D ++D + + E+ + GL+D Sbjct: 200 EMSPANREQIDAYLTSIWGQVTNDVAESRKISVDSLNAIADRMLMFYPAEESVQCGLVDT 259 Query: 227 VGGQEEVWQSLYAL-GVDQSIR 247 + + +V L A+ G+D+ R Sbjct: 260 LIYKNDVRNYLKAMVGIDKDDR 281 >gi|330997115|ref|ZP_08320968.1| signal peptide peptidase SppA [Paraprevotella xylaniphila YIT 11841] gi|329570910|gb|EGG52617.1| signal peptide peptidase SppA [Paraprevotella xylaniphila YIT 11841] Length = 587 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 132/251 (52%), Gaps = 20/251 (7%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D++ + + + D+S A+++ ++S GGSAYA E I+ ++ ++ KPV+ + MAA Sbjct: 326 DAETVCHDLRTLREDESVKAVVLRINSGGGSAYASEQIWHEVKLLRKAKPVVVSMGGMAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF 167 S GY ISCA+N IVA T+L GSIG+ P L DKLG+ VK++ +P Sbjct: 386 SGGYYISCAANYIVAEPTTLTGSIGIFGLIPDASQLLSDKLGLHFDVVKTNAHADFGTPA 445 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 NP QMMQ + Y F V+E RN+ + L++GR+WTG +A + GL D Sbjct: 446 RPFNPSEAQMMQGYIQRGYKLFTERVAEGRNMETSQVEKLAEGRVWTGQQAVENGLADAN 505 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWN----PPKNYWFCDL----KNLSISSLLEDTI--- 276 G + A+ S+ KIKD++ P W+ L K +++ L++T+ Sbjct: 506 GNLQT------AIKKAASLAKIKDYHTEYAPTPAPWYEGLFDQQKKDYLNTALQETLGTY 559 Query: 277 --PLMKQTKVQ 285 PLM +++ Sbjct: 560 YAPLMNLRQIR 570 >gi|160890040|ref|ZP_02071043.1| hypothetical protein BACUNI_02479 [Bacteroides uniformis ATCC 8492] gi|317481508|ref|ZP_07940572.1| signal peptide peptidase SppA [Bacteroides sp. 4_1_36] gi|156860428|gb|EDO53859.1| hypothetical protein BACUNI_02479 [Bacteroides uniformis ATCC 8492] gi|316902325|gb|EFV24215.1| signal peptide peptidase SppA [Bacteroides sp. 4_1_36] Length = 589 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 DS+++I+ + ++ D+ A+++ ++SPGGSAY E I+ A+ ++K KPVI + + AA Sbjct: 329 DSKKVIKDLRKLKDDEDVKAVVLRVNSPGGSAYGSEQIWYAVSELKKEKPVIVSMGDYAA 388 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ +P K DK+GV+ VK++ Sbjct: 389 SGGYYISCNADTIVAEPTTLTGSIGIFGMFPNAKGLTDKIGVNFDVVKTNKYADFGMLTR 448 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V++ Y F+ S+ R I + ++ GR+WTG++AK++GL+D +G Sbjct: 449 PMNDGEKGLMQMYVNNGYDLFLTRCSDGRGISKEDLDKIAQGRVWTGSKAKELGLVDELG 508 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ ++ GVD Sbjct: 509 GLDKALDIAIAKAGVD 524 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 89/202 (44%), Gaps = 5/202 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I++ +D + + +S G + E I A++ K I + + Sbjct: 80 DDILSSIKKAKENDDIKGIYIEATSLGAGFASREEIRNALKDFKESGKFIVAYGDSYSQG 139 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y +S ++ ++ +V G+ + K L K+GV ++ K K+ PF + Sbjct: 140 LYYLSSIADKVLLNPQGMVEWRGLAATPMFFKDLLAKIGVEMQIFKVGTYKSAVEPFIST 199 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDV 226 E++P + + + S + V+ESR I D ++D + + E+ + GL+D Sbjct: 200 EMSPANREQIDAYLTSIWGQVTNDVAESRKISVDSLNAIADRMLMFYPAEESVQCGLVDT 259 Query: 227 VGGQEEVWQSLYAL-GVDQSIR 247 + + +V L A+ G+D+ R Sbjct: 260 LIYKNDVRNYLKAMVGIDKDDR 281 >gi|86157946|ref|YP_464731.1| signal peptide peptidase A [Anaeromyxobacter dehalogenans 2CP-C] gi|85774457|gb|ABC81294.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Anaeromyxobacter dehalogenans 2CP-C] Length = 316 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 121/201 (60%), Gaps = 6/201 (2%) Query: 34 NSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + P V I ++G I ++++++++RI R + D A+++ + SPGGS A + I Sbjct: 48 SGPRVGVIDVKGTIGGGPERDETEDILKRIRRFADDGDLKAVVIRVDSPGGSVGASQEIH 107 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++++ +K V+ + +AAS G +S A IVA +L GSIGV+ Q+P VK +K Sbjct: 108 DEVKRLAQKKVVVCSMGNLAASGGLYVSVACPKIVANPGTLTGSIGVISQFPNVKDLAEK 167 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LGV +++VK+ +K +PF ++ P+ Q +V+++ FV+ V+E R + K + Sbjct: 168 LGVKVETVKTGKLKDAGNPFRDMTPEDRAYWQGLVENTLGQFVKAVAEGRKLDEAKVRAI 227 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 +DGR+ TGA+AK+ GL+D +G Sbjct: 228 ADGRVLTGAQAKEAGLVDQLG 248 >gi|218128954|ref|ZP_03457758.1| hypothetical protein BACEGG_00527 [Bacteroides eggerthii DSM 20697] gi|217988917|gb|EEC55234.1| hypothetical protein BACEGG_00527 [Bacteroides eggerthii DSM 20697] Length = 588 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 120/196 (61%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I + ++ D++ A+++ ++SPGGSAY E I+ A++++K KPVI + + AA Sbjct: 328 NSEKVIRDLRKLKDDENVKAVVLRVNSPGGSAYGSEQIWYAVEQLKKEKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+C ++ IVA T+L GSIG+ P K +KLG++ VK++P + Sbjct: 388 SGGYYIACNADTIVAEPTTLTGSIGIFGMMPNAKGLTEKLGLNFDVVKTNPYADFGNLTR 447 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V++ Y F+ S+ R I ++ ++ GR+WTG+ AK++GL+D +G Sbjct: 448 PMNDGEKGLMQMYVNNGYKLFLTRCSDGRGISMEELDKIAQGRVWTGSTAKELGLVDELG 507 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ + ++ GVD Sbjct: 508 GLDKALEIAVAKAGVD 523 >gi|332886098|gb|EGK06342.1| signal peptide peptidase SppA, 67K type [Dysgonomonas mossii DSM 22836] Length = 584 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/230 (31%), Positives = 125/230 (54%), Gaps = 11/230 (4%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------QELIERIERISRDDS 65 M S+ +T V F S+ +D +A + G I + + ++ IE++ +D Sbjct: 285 MASIKDMTSVSFVKESNSKD---VIAILYAEGSINNGSGKDGITDKRYVKEIEKLKDNDK 341 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A++ ++SPGGSAYA E I++AI +K +KPV+ + + AAS GY I+C ++ I+A Sbjct: 342 VKAVVFRVNSPGGSAYASEQIWKAITDLKAKKPVVVSMGDYAASGGYYIACNASKIIAQP 401 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +L GSIG+ +P + K+G+S +VK++ + P+ ++Q ++ Sbjct: 402 NTLTGSIGIFGMFPNFEGLTKKVGLSFDNVKTNKFADFGDATRPMRPEEKVILQQYIEHG 461 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Y F+ SE RNIP D ++ GR+WTG +A K+GL+D +G + Q Sbjct: 462 YDLFLTRCSEGRNIPKDSLDHIAQGRVWTGNQALKIGLVDALGNIDTAIQ 511 >gi|317477481|ref|ZP_07936707.1| signal peptide peptidase SppA [Bacteroides eggerthii 1_2_48FAA] gi|316906345|gb|EFV28073.1| signal peptide peptidase SppA [Bacteroides eggerthii 1_2_48FAA] Length = 588 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 120/196 (61%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I + ++ D++ A+++ ++SPGGSAY E I+ A++++K KPVI + + AA Sbjct: 328 NSEKVIRDLRKLKDDENVKAVVLRVNSPGGSAYGSEQIWYAVEQLKKEKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+C ++ IVA T+L GSIG+ P K +KLG++ VK++P + Sbjct: 388 SGGYYIACNADTIVAEPTTLTGSIGIFGMMPNAKGLTEKLGLNFDIVKTNPYADFGNLTR 447 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V++ Y F+ S+ R I ++ ++ GR+WTG+ AK++GL+D +G Sbjct: 448 PMNDGEKGLMQMYVNNGYKLFLTRCSDGRGISMEELDKIAQGRVWTGSTAKELGLVDELG 507 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ + ++ GVD Sbjct: 508 GLDKALEIAVAKAGVD 523 >gi|197122751|ref|YP_002134702.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] gi|196172600|gb|ACG73573.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] Length = 382 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 121/200 (60%), Gaps = 5/200 (2%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P V I ++G I ++++++++RI R + D A+++ + SPGGS A + I Sbjct: 115 SGPRVGVIDVKGTIGGGERDETEDILKRIRRFAEDGDLKAVVIRVDSPGGSVGASQEIHD 174 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++++ +K V+ + +AAS G +S A IVA +L GSIGV+ Q+P VK +KL Sbjct: 175 EVKRLAQKKVVVCSMGNLAASGGLYVSVACPKIVANPGTLTGSIGVISQFPNVKDLAEKL 234 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV +++VK+ +K +PF ++ P+ Q +V+++ FV+ V+E R + K ++ Sbjct: 235 GVKVETVKTGKLKDAGNPFRDMTPEDRAYWQGLVENTLGQFVKAVAEGRKLDEAKVRAIA 294 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 DGR+ TGA+AK+ GL+D +G Sbjct: 295 DGRVLTGAQAKEAGLVDQLG 314 >gi|220917534|ref|YP_002492838.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] gi|219955388|gb|ACL65772.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] Length = 382 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 121/200 (60%), Gaps = 5/200 (2%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P V I ++G I ++++++++RI R + D A+++ + SPGGS A + I Sbjct: 115 SGPRVGVIDVKGTIGGGERDETEDILKRIRRFAEDGDLKAVVIRVDSPGGSVGASQEIHD 174 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++++ +K V+ + +AAS G +S A IVA +L GSIGV+ Q+P VK +KL Sbjct: 175 EVKRLAQKKVVVCSMGNLAASGGLYVSVACPKIVANPGTLTGSIGVISQFPNVKDLAEKL 234 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV +++VK+ +K +PF ++ P+ Q +V+++ FV+ V+E R + K ++ Sbjct: 235 GVKVETVKTGKLKDAGNPFRDMTPEDRAYWQGLVENTLGQFVKAVAEGRKLDEAKVRAIA 294 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 DGR+ TGA+AK+ GL+D +G Sbjct: 295 DGRVLTGAQAKEAGLVDQLG 314 >gi|332876682|ref|ZP_08444441.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685387|gb|EGJ58225.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 587 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 133/251 (52%), Gaps = 20/251 (7%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D++ + + + D+S A+++ ++S GGSAYA E I+ ++ ++ KPV+ + MAA Sbjct: 326 DAETVCRDLRTLREDESVKAVVLRVNSGGGSAYASEQIWHEVKLLREAKPVVVSMGGMAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF 167 S GY ISCA+N IVA T+L GSIG+ P L DKLG+ VK++ +P Sbjct: 386 SGGYYISCAANYIVAEPTTLTGSIGIFGLIPDASQLLSDKLGLHFDVVKTNAHADFGTPA 445 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 NP QMMQ + Y F V++ RN+ + L++GR+WTG +A + GL D Sbjct: 446 RPFNPSEAQMMQGYIQRGYKLFTERVADGRNMKTGQVKKLAEGRVWTGRQAVENGLADTN 505 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWN----PPKNYWFCDL----KNLSISSLLEDTI--- 276 G + A+ S+ KIKD++ P + W+ L K +++ L++T+ Sbjct: 506 GNLQT------AIKKAASLAKIKDYHTEYAPTPSPWYEGLFDQQKKDYLNTALQETLGTY 559 Query: 277 --PLMKQTKVQ 285 PLM +++ Sbjct: 560 YAPLMNLRQIR 570 >gi|289192538|ref|YP_003458479.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus sp. FS406-22] gi|288938988|gb|ADC69743.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus sp. FS406-22] Length = 314 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 120/193 (62%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +D++ I ++++ +DDS +++ ++SPGG A E + R ++++ +KPV+ V + Sbjct: 67 KDARYYINLLDKLEKDDSVKGVLLIVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLD 126 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS Y++S ++ IVA + S+VGSIGV + + KLG+++ ++K+ K SPF Sbjct: 127 ASGAYMVSAPADYIVAEKHSIVGSIGVRMDLIHYYGLMKKLGINVTTIKAGKYKDIGSPF 186 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + + +Q +++ +Y FV+ V+E R++ + TL ++DG+I+TG +AKKVGL+D V Sbjct: 187 RPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYTGEDAKKVGLVDEV 246 Query: 228 GGQEEVWQSLYAL 240 G +E + L L Sbjct: 247 GTEETALKKLEEL 259 >gi|187250455|ref|YP_001874937.1| signal peptide peptidase SppA, 36K type [Elusimicrobium minutum Pei191] gi|186970615|gb|ACC97600.1| Signal peptide peptidase SppA, 36K type [Elusimicrobium minutum Pei191] Length = 371 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 94/281 (33%), Positives = 147/281 (52%), Gaps = 27/281 (9%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSPG 77 SS VA I IRG I + Q + RI + D+ A+I+ ++SPG Sbjct: 96 SSQARHGETGVAVIRIRGVITEPQASSWRDQSASSIARRIRTTADKDNVKAIIIDINSPG 155 Query: 78 GSAYAGEAIFRAI---QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 G+ A + I+ AI ++VKN+K V+ +++AS GY I+ A + IVA +L GSIGV Sbjct: 156 GTVAAVQDIYNAILYARQVKNKK-VVALFRDVSASGGYYIAVACDKIVAQPGTLTGSIGV 214 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 +FQ + ++K+GVS ++KS K SP+ ++ + ++Q+++D SY+ F+ +V Sbjct: 215 IFQTGNFEGLMNKIGVSFSTIKSGQHKDIGSPYRKMTEEERTLLQELIDDSYNQFLDVVK 274 Query: 195 ESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD-- 251 R N+ + V +DGRI+TG +A +GLID +GG+EE AL + + IKD Sbjct: 275 TGRPNMNPVELKVYADGRIFTGRKAFSIGLIDALGGEEE------ALKIAGELADIKDPK 328 Query: 252 --WNPPKNY--WFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 N P + W L S L+ I + KV LW Sbjct: 329 IISNRPTTFREWLSSLDPEMSSKTLDRQIEAISSPKVAYLW 369 >gi|256810518|ref|YP_003127887.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus fervens AG86] gi|256793718|gb|ACV24387.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus fervens AG86] Length = 311 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 119/195 (61%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q +D++ I ++ + +DDS +++ ++SPGG A E + R ++++ N+KPV+ V Sbjct: 65 QKKDARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELANKKPVVVYVEG 124 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + AS Y++S ++ IVA + S+VGSIGV + + KLGV++ ++K+ K S Sbjct: 125 LDASGAYMVSAPADYIVAEKHSIVGSIGVRMDVMHYYGLMKKLGVNVTTIKAGKYKDIGS 184 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF + + + +Q +++ +Y FV V+E R + + TL ++DG+I++G +AKKVGL+D Sbjct: 185 PFRPMTEEEREYLQKMINETYMDFVEWVAEHRGLSINYTLKIADGKIYSGEDAKKVGLVD 244 Query: 226 VVGGQEEVWQSLYAL 240 VG +E + L L Sbjct: 245 EVGTEETALKKLEEL 259 >gi|218886796|ref|YP_002436117.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757750|gb|ACL08649.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 297 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 123/229 (53%), Gaps = 3/229 (1%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 P V + + G I D + ++ + D S +++ + SPGG A + + A++++ Sbjct: 48 GPRVGVVRVEGMIADISKTTAWMDTLRDDPSVRGVLLRVDSPGGGVAASQELLDAVRRMA 107 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV+ + +AAS GY IS + ++A +L GSIGV + P V+ +DKLG++ ++ Sbjct: 108 RVKPVVVSMGTVAASGGYYISLGATRVIANPATLTGSIGVKMELPNVQGLMDKLGLARQT 167 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + S MK SPF + P+ + +Q +V Y FV V+ SRN+P +K ++DGR T Sbjct: 168 LVSGDMKDAGSPFRAMTPQEREYLQALVMDMYDQFVTEVANSRNLPVEKVRAVADGRALT 227 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCD 262 G +A ++GL+D +GG + L L G+ + R + P + W D Sbjct: 228 GRQAHELGLVDALGGMDMALTDLQQLCGIAE--RPVLVEQPKPSSWLRD 274 >gi|258592126|emb|CBE68431.1| Signal peptide peptidase SppA, 36K type precursor [NC10 bacterium 'Dutch sediment'] Length = 290 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 129/230 (56%), Gaps = 2/230 (0%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 V +SL+ L + FS+ VA I + G I DS+E+IE++E+ + S A+++ Sbjct: 12 VFVSLLILFSLAFSFGRWERLGGSKVALITVDGVILDSKEIIEQLEKYRTNPSVKAIVLR 71 Query: 73 LSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGG + I + K + ++KP++ + +AAS GY I+ A+++IVA ++ G Sbjct: 72 INSPGGGVAPSQEIHEEVLKTRQTDKKPIVASMGSVAASGGYYIASATDLIVANPGTITG 131 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ Q P + + K+GV VKS K SP E+ Q++Q ++D + F+ Sbjct: 132 SIGVVLQVPNISGLMQKIGVKSVVVKSGLHKDLASPTREMTDAERQILQGMLDDVHGQFI 191 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ R I K ++DGRI++G EA+ +GL+D +G ++ + AL Sbjct: 192 DAVAMGRRIDRKKVETMADGRIFSGREAQSLGLVDQLGNLQDAIERAGAL 241 >gi|15668832|ref|NP_247635.1| protease IV SppA [Methanocaldococcus jannaschii DSM 2661] gi|3915936|sp|Q58067|Y651_METJA RecName: Full=Putative protease MJ0651 gi|2826302|gb|AAB98642.1| protease IV (sppA) [Methanocaldococcus jannaschii DSM 2661] Length = 311 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 121/195 (62%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q +D++ I ++ + +DDS +++ ++SPGG A E + R ++++ +KPV+ V Sbjct: 65 QKKDARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEG 124 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + AS Y++S ++ IVA + S+VGSIGV + + KLG+++ ++K+ K S Sbjct: 125 LDASGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGS 184 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF + + + +Q +++ +Y FV+ V+E R++ + TL ++DG+I++G +AKKVGL+D Sbjct: 185 PFRPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVD 244 Query: 226 VVGGQEEVWQSLYAL 240 VG +E+ + L L Sbjct: 245 EVGTEEDALKKLEQL 259 >gi|2129226|pir||C64381 proteinase IV (EC 3.4.-.-) - Methanococcus jannaschii Length = 315 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 121/195 (62%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q +D++ I ++ + +DDS +++ ++SPGG A E + R ++++ +KPV+ V Sbjct: 69 QKKDARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEG 128 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + AS Y++S ++ IVA + S+VGSIGV + + KLG+++ ++K+ K S Sbjct: 129 LDASGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGS 188 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF + + + +Q +++ +Y FV+ V+E R++ + TL ++DG+I++G +AKKVGL+D Sbjct: 189 PFRPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVD 248 Query: 226 VVGGQEEVWQSLYAL 240 VG +E+ + L L Sbjct: 249 EVGTEEDALKKLEQL 263 >gi|237722788|ref|ZP_04553269.1| protease IV [Bacteroides sp. 2_2_4] gi|293371818|ref|ZP_06618228.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CMC 3f] gi|229447310|gb|EEO53101.1| protease IV [Bacteroides sp. 2_2_4] gi|292633270|gb|EFF51841.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CMC 3f] Length = 592 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 111/181 (61%), Gaps = 6/181 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ +D A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVKELKTKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFS 168 Y ISC ++ IVA T+L GSIG+ P VK DK+G+S +K+ K + PF+ Sbjct: 395 YYISCVADTIVAEPTTLTGSIGIFGMIPNVKGLTDKIGLSYDVVKTNKYADFGNIMRPFN 454 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +QMM + Y FV +E R++ + +++GR+WTG AK++GL+D +G Sbjct: 455 EDEKSLLQMM---ITEGYDTFVTRCAEGRHMTKEAIEKIAEGRVWTGETAKELGLVDELG 511 Query: 229 G 229 G Sbjct: 512 G 512 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + +S G S + + I A+ K + + Sbjct: 84 DILSSIQKAKENENIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S + VS SRNI D V +D + + E+ K GL D + Sbjct: 204 MSPANREQVTTFITSIWGQVTEGVSTSRNISVDSLNVYADRMLMFYPAEESVKCGLADTL 263 >gi|260175077|ref|ZP_05761489.1| protease IV [Bacteroides sp. D2] gi|299147649|ref|ZP_07040713.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_23] gi|315923305|ref|ZP_07919545.1| conserved hypothetical protein [Bacteroides sp. D2] gi|298514436|gb|EFI38321.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_23] gi|313697180|gb|EFS34015.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 592 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 111/181 (61%), Gaps = 6/181 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ +D A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVKELKTKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS---PFS 168 Y ISC ++ IVA T+L GSIG+ P VK DK+G+S VK++ + PF+ Sbjct: 395 YYISCVADTIVAEPTTLTGSIGIFGMIPNVKGLTDKIGLSYDVVKTNKFADFGNIMRPFN 454 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +QMM + Y FV +E R++ + +++GR+WTG AK++GL+D +G Sbjct: 455 EDEKSLLQMM---ITEGYDTFVTRCAEGRHMTKEAIEKIAEGRVWTGETAKELGLVDELG 511 Query: 229 G 229 G Sbjct: 512 G 512 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 43/219 (19%), Positives = 91/219 (41%), Gaps = 13/219 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + +S G S + + I A+ K + + Sbjct: 84 DILSSIQKAKENENIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S + VS SRNI D V +D + + E+ K GL D + Sbjct: 204 MSPANREQVTTFITSIWGQVTEGVSTSRNISVDSLNVYADRMLMFYPAEESVKCGLADTL 263 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 +Y V ++K+ + N N L ++ Sbjct: 264 ---------IYRNDVRNYLKKLVEINEDDNLPILGLGDM 293 >gi|237713852|ref|ZP_04544333.1| protease IV [Bacteroides sp. D1] gi|262409239|ref|ZP_06085783.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_22] gi|294647614|ref|ZP_06725184.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CC 2a] gi|294810039|ref|ZP_06768712.1| signal peptide peptidase SppA, 67K type [Bacteroides xylanisolvens SD CC 1b] gi|298482326|ref|ZP_07000513.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D22] gi|229446008|gb|EEO51799.1| protease IV [Bacteroides sp. D1] gi|262352986|gb|EEZ02082.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_22] gi|292637046|gb|EFF55494.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CC 2a] gi|294442755|gb|EFG11549.1| signal peptide peptidase SppA, 67K type [Bacteroides xylanisolvens SD CC 1b] gi|295085355|emb|CBK66878.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Bacteroides xylanisolvens XB1A] gi|298271613|gb|EFI13187.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D22] Length = 592 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 111/181 (61%), Gaps = 6/181 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ D+ A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDDNDVKAVVLRVNSPGGSAFASEQIWHAVKELKTKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFS 168 Y ISC ++ IVA T+L GSIG+ P VK DK+G+S +K+ K + PF+ Sbjct: 395 YYISCVADTIVAEPTTLTGSIGIFGIIPNVKGLTDKIGLSYDVVKTNKYADFGNIMRPFN 454 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +QMM + Y FV +E R++ + +++GR+WTG AKK+GL+D +G Sbjct: 455 EDERSLLQMM---ITEGYDTFVSRCAEGRHMTKEAIEKIAEGRVWTGETAKKLGLVDELG 511 Query: 229 G 229 G Sbjct: 512 G 512 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 4/193 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + SS G S + + I A+ K + + Sbjct: 84 DILSSIQKAKENENIKGIYLQASSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S + VS SRNIP D V +D + + E+ + G D + Sbjct: 204 MSPANREQVTAFITSIWGQVTEGVSASRNIPVDSLNVYADRMLMFYPSEESVRCGFADTL 263 Query: 228 GGQEEVWQSLYAL 240 + +V L L Sbjct: 264 IYRNDVRNYLKKL 276 >gi|160884948|ref|ZP_02065951.1| hypothetical protein BACOVA_02940 [Bacteroides ovatus ATCC 8483] gi|156109298|gb|EDO11043.1| hypothetical protein BACOVA_02940 [Bacteroides ovatus ATCC 8483] Length = 592 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 111/181 (61%), Gaps = 6/181 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ +D A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVKELKTKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFS 168 Y ISC ++ IVA T+L GSIG+ P VK DK+G+S +K+ K + PF+ Sbjct: 395 YYISCVADTIVAEPTTLTGSIGIFGMIPNVKGLTDKIGLSYDVVKTNKYADFGNIMRPFN 454 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +QMM + Y FV +E R++ + +++GR+WTG AK++GL+D +G Sbjct: 455 EDEKSLLQMM---ITEGYDTFVTRCAEGRHMTKEAIEKIAEGRVWTGETAKELGLVDELG 511 Query: 229 G 229 G Sbjct: 512 G 512 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + +S G S + + I A+ K + + Sbjct: 84 DILSSIQKAKENENIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S + VS SRNI D V +D + + E+ K GL D + Sbjct: 204 MSPANREQVTTFITSIWGQVTEGVSTSRNISVDSLNVYADRMLMFYPAEESIKCGLADTL 263 >gi|319902957|ref|YP_004162685.1| signal peptide peptidase A [Bacteroides helcogenes P 36-108] gi|319417988|gb|ADV45099.1| signal peptide peptidase A [Bacteroides helcogenes P 36-108] Length = 591 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 110/181 (60%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I+ + ++ D A+++ ++SPGGSAY E I+ A+ ++K +KPVI + + AA Sbjct: 331 NSEKVIKDLRKLKDDKDVKAVVLRVNSPGGSAYGSEQIWYAVSELKKKKPVIVSMGDYAA 390 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ +P K DK+G+S VK++ Sbjct: 391 SGGYYISCNADTIVAEPTTLTGSIGIFGMFPNAKGLADKIGISFDVVKTNRYSDFGMITR 450 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N ++Q ++ Y F+ SE R I ++ ++ GR+WTG++AK++GL+D +G Sbjct: 451 PMNEGEKGLLQMYINQGYDTFLARCSEGRGISKEELDKIAQGRVWTGSKAKELGLVDELG 510 Query: 229 G 229 G Sbjct: 511 G 511 >gi|256545925|ref|ZP_05473280.1| U7 family peptidase [Anaerococcus vaginalis ATCC 51170] gi|256398347|gb|EEU11969.1| U7 family peptidase [Anaerococcus vaginalis ATCC 51170] Length = 333 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 122/210 (58%), Gaps = 5/210 (2%) Query: 33 DNSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 D +A I+ G I D + +E++E I++DDS +I+ ++SPGG+ Y E I Sbjct: 64 DKKNKIALISYEGAIGDGEVYDSFMEQLEDINKDDSVKGVIMQVNSPGGAVYNSEQIANK 123 Query: 90 IQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I++++ K PV T + MAAS GY IS ++ I A+ +L GSIGV+ + +K Sbjct: 124 IKEIQTDKKIPVFTVMKTMAASGGYYISAPTDKIYASNETLTGSIGVIMSSRSFQGLFEK 183 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ +++ + MK S ++ + + QD+++SS+ F+++VS+ R++ D+ L Sbjct: 184 YGIKEQNITTGKMKDAGSLGKDMTDEQKKYFQDLINSSFDRFIKVVSQGRSMKEDEVRKL 243 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +DGR++ GA+AK GL+D +G ++ + + Sbjct: 244 ADGRVYDGAQAKNNGLVDKIGNLDDAIEDM 273 >gi|255691166|ref|ZP_05414841.1| signal peptide peptidase SppA, 67K type [Bacteroides finegoldii DSM 17565] gi|260623069|gb|EEX45940.1| signal peptide peptidase SppA, 67K type [Bacteroides finegoldii DSM 17565] Length = 592 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 110/181 (60%), Gaps = 6/181 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ +D A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWYAVKELKTKKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFS 168 Y ISC ++ IVA T+L GSIG+ P VK DK+G+S +K+ K + PFS Sbjct: 395 YYISCGADTIVAEPTTLTGSIGIFGMVPNVKELTDKIGLSYDVVKTNKYADFGNIMRPFS 454 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +QMM V Y F+ +E R+ + +++GR+WTG AK++GL+D +G Sbjct: 455 EGEKALLQMM---VAEGYDTFITRCAEGRHTTKEAIEKIAEGRVWTGEAAKELGLVDELG 511 Query: 229 G 229 G Sbjct: 512 G 512 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 4/180 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ ++ + + +S G S + + I A+ K + + Sbjct: 84 DILSSIKKAKENEDIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSAADKVLLNPKGMIEWRGIASTPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFIATE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + + S + VS SRNIP D +D + + E+ + GL D + Sbjct: 204 MSPANREQVTTFISSIWSQVTEGVSASRNIPVDSLKAYADRMLMFYPAEESVRCGLADTL 263 >gi|333029937|ref|ZP_08457998.1| signal peptide peptidase SppA, 67K type [Bacteroides coprosuis DSM 18011] gi|332740534|gb|EGJ71016.1| signal peptide peptidase SppA, 67K type [Bacteroides coprosuis DSM 18011] Length = 591 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 116/185 (62%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +++ ++++ +++ A+++ ++SPGGSAYA E I++A+ +K +KPVI + + AAS Sbjct: 333 ESVVKDLKKLEENENIKAVVLRVNSPGGSAYASEQIWKAVVDLKAKKPVIVSMGDYAASG 392 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY IS A++ I+A T+L GSIG+ P + +K+G++ VK++ S F Sbjct: 393 GYYISAAADHIIAEPTTLTGSIGIFAMIPSFEKVANKVGLNFDVVKTNKHADFGSIFRNF 452 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 N Q++Q ++ Y F++ ++ R I ++ +++GR+WTGA+AK++GLID +GG Sbjct: 453 NADERQLLQFYIEEGYGLFIKRCADGRGISEEEIRKIAEGRVWTGAKAKEIGLIDELGGL 512 Query: 231 EEVWQ 235 + + Sbjct: 513 NDALE 517 >gi|298385314|ref|ZP_06994873.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 1_1_14] gi|298262458|gb|EFI05323.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 1_1_14] Length = 593 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 5/211 (2%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 + VY++ + +S + I G ++I + ++ D+ A+++ ++SPGG Sbjct: 307 NIVAVYYASGEITDYSSSSTSEEGIVGT-----KVIRDLRKLKDDEDVKAVVLRVNSPGG 361 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SA+A E I+ A++++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ Sbjct: 362 SAFASEQIWHAVKELKTEKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMV 421 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P VK +K+G++ VK++ + N +MQ ++ Y FV +E R+ Sbjct: 422 PNVKELSEKIGLTYDVVKTNKFSDFGNIMRPFNQDEKTLMQMMITQGYDTFVNRCAEGRH 481 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +++GR+WTG AK++GL+DV+GG Sbjct: 482 MSKEAIEKIAEGRVWTGEAAKELGLVDVLGG 512 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + S G S + + I A+ K I + Sbjct: 84 DILSSIKKAKENENIKGIYLQASMLGTSYASLQEIRNALLDFKESGKFIIAYGDSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFISTE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + ++S + VS SR++P D L+D + + E+ + GL D + Sbjct: 204 MSPANREQVTAFINSIWGQVTEGVSASRSLPVDSLNALADRMLMFYPAEESVQCGLADTL 263 >gi|29347289|ref|NP_810792.1| protease IV [Bacteroides thetaiotaomicron VPI-5482] gi|29339188|gb|AAO76986.1| protease IV [Bacteroides thetaiotaomicron VPI-5482] Length = 592 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 108/178 (60%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ D+ A+++ ++SPGGSA+A E I+ A++++K KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDDEDVKAVVLRVNSPGGSAFASEQIWHAVKELKTEKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISC ++ IVA T+L GSIG+ P VK +K+G++ VK++ + N Sbjct: 395 YYISCVADTIVAEPTTLTGSIGIFGMVPNVKELSEKIGLTYDVVKTNKFSDFGNIMRPFN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +MQ ++ Y FV +E R++ + +++GR+WTG AK++GL+DV+GG Sbjct: 455 QDEKTLMQMMITQGYDTFVNRCAEGRHMSKEAIEKIAEGRVWTGEAAKELGLVDVLGG 512 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + S G S + + I A+ K I + Sbjct: 84 DILSSIKKAKENENIKGIYLQASMLGTSYASLQEIRNALLDFKESGKFIIAYGDSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFISTE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + ++S + VS SR++P D L+D + + E+ + GL D + Sbjct: 204 MSPANREQVTAFINSIWGQVTEGVSASRSLPVDSLNALADRMLMFYPAEESVQCGLADTL 263 >gi|288817557|ref|YP_003431904.1| signal peptide peptidase [Hydrogenobacter thermophilus TK-6] gi|288786956|dbj|BAI68703.1| signal peptide peptidase [Hydrogenobacter thermophilus TK-6] gi|308751159|gb|ADO44642.1| signal peptide peptidase SppA, 36K type [Hydrogenobacter thermophilus TK-6] Length = 278 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 121/199 (60%), Gaps = 3/199 (1%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN- 95 +A + + G I D++ +I++IE+ +DDS AL++ + SPGGS A + I+RA+++ K+ Sbjct: 29 RIAVLKVEGIIIDAEPVIKKIEKAKKDDSIKALVLRVDSPGGSVGASQEIYRALERFKDS 88 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +KP++ + +AAS GY IS ++ I A ++ GSIGV+ ++ + L +LGV ++ Sbjct: 89 KKPLVVSMGNVAASGGYYISVPADYIYANPGTITGSIGVIIEHIDYRELLSRLGVKATAI 148 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR--LVSESRNIPYDKTLVLSDGRIW 213 K+ K SPF E+ + + ++ +D +Y F+ L S+ I D+ ++DGRI Sbjct: 149 KTGKFKDTLSPFRELTDEEREYLKKTIDDAYGQFLSSILKYRSKKISEDELRSIADGRIM 208 Query: 214 TGAEAKKVGLIDVVGGQEE 232 TG A+KVGL+D +G E+ Sbjct: 209 TGLMAQKVGLVDGLGNIED 227 >gi|150399145|ref|YP_001322912.1| signal peptide peptidase SppA, 36K type [Methanococcus vannielii SB] gi|150011848|gb|ABR54300.1| signal peptide peptidase SppA, 36K type [Methanococcus vannielii SB] Length = 311 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 113/182 (62%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ I+ ++ + +D+ A+I+ ++SPGG A E + R I++V +KPV+ + + AS Sbjct: 63 EDYIKWLDEVENNDNIKAVIIKINSPGGEVVASEKLSRKIKEVSEKKPVVAYIETIGASG 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y+ + +SN IVA + SLVGSIGV + + ++KLGV+ S+ K +P + Sbjct: 123 AYMAASSSNYIVAEKQSLVGSIGVRMELLHYYGLMEKLGVNTTSITGGKYKNIGTPNRPM 182 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +M++ +VD Y F+ +V+E+RN+ ++TL+ +DG+I+ G +AK GLID VG + Sbjct: 183 TEEEYKMLESIVDEMYFDFISMVAENRNMTINETLIAADGKIYNGLQAKNAGLIDQVGTE 242 Query: 231 EE 232 ++ Sbjct: 243 KD 244 >gi|255536295|ref|YP_003096666.1| putative protease IV [Flavobacteriaceae bacterium 3519-10] gi|255342491|gb|ACU08604.1| putative protease IV [Flavobacteriaceae bacterium 3519-10] Length = 584 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 119/204 (58%), Gaps = 6/204 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++LI+ I+++++++ +++ ++SPGGSA A + I +Q++K +KP+I + AAS Sbjct: 325 SEDLIKEIKKLTKNEKVKGVVLRINSPGGSANASDEILFELQQLKAKKPLIVSFGDYAAS 384 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ A++ I A +L GSIGV +PY K +K G+S SV ++ S + Sbjct: 385 GGYYIAMAADRIYAEPNTLTGSIGVFGVFPYFKEIANKNGLSAHSVNTNANSNMFSTING 444 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + P +MQ V+ +Y FV V+++RN + + + GR+W+G AK++GL+D +G Sbjct: 445 ITPGGAAVMQKSVEMTYKRFVHFVTQNRNRSFAQIDEIGGGRVWSGIRAKQIGLVDEIGN 504 Query: 230 QEEVWQSLYALGVDQSIRKIKDWN 253 + + Q+ K+KD+N Sbjct: 505 LNDAVK----FAAQQA--KLKDYN 522 >gi|153809450|ref|ZP_01962118.1| hypothetical protein BACCAC_03765 [Bacteroides caccae ATCC 43185] gi|149127910|gb|EDM19132.1| hypothetical protein BACCAC_03765 [Bacteroides caccae ATCC 43185] Length = 592 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 109/176 (61%), Gaps = 6/176 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + ++ +D A+++ ++SPGGSA+A E I+ A++++K +KPVI + + AAS GY ISC Sbjct: 340 LRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVKELKTKKPVIVSMSDYAASGGYYISC 399 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFSEVNPK 173 A++ IVA T+L GSIG+ P VK DK+G++ +K+ K S PF+E Sbjct: 400 AADTIVAEPTTLTGSIGIFGMVPNVKGLTDKIGLTYDVVKTNKYSDFGNIMRPFNEGEKA 459 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +QM + Y+ F+ +E R++ + +++GR+WTG AK++GL+D +GG Sbjct: 460 LLQM---TITEGYNTFIGRCAEGRHMTKEAIEKIAEGRVWTGEAAKELGLVDELGG 512 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 4/193 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + SS G S + + I A+ K I + Sbjct: 84 DILSSIKKAKENENIKGIYLQASSLGTSYASLQEIRNALLDFKESGKFIIAYGDSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSVADKVLLNPKGMIEWRGIAAAPVFYKDLLQKIGVEMQIFKVGTYKSAVEPFISTE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + ++S + VS SR IP D +D + + E+ K GL D + Sbjct: 204 MSPANREQVTAYINSIWRQVTEGVSNSRYIPVDSLNAYADRMLMFYPAEESVKCGLADTL 263 Query: 228 GGQEEVWQSLYAL 240 + +V L L Sbjct: 264 IYRNDVRNYLKEL 276 >gi|150004168|ref|YP_001298912.1| protease IV [Bacteroides vulgatus ATCC 8482] gi|294777915|ref|ZP_06743357.1| signal peptide peptidase SppA, 67K type [Bacteroides vulgatus PC510] gi|149932592|gb|ABR39290.1| protease IV [Bacteroides vulgatus ATCC 8482] gi|294448244|gb|EFG16802.1| signal peptide peptidase SppA, 67K type [Bacteroides vulgatus PC510] Length = 593 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 6/187 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D Q++ + + ++ +D A+++ ++SPGGSAY + I+R + ++K +KPVI + + AA Sbjct: 328 DVQKMCKDLRKLRDNDDVKAVVLRVNSPGGSAYGSDQIWREVVRLKEKKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S GY ISCA+N I A T+L GSIG+ Y K F + LG++ VK++ M + Sbjct: 388 SGGYYISCAANRIFADPTTLTGSIGIFGMMYSGEKLFTETLGLNFDVVKTNKMADLGASL 447 Query: 168 SEV-----NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 V N ++MQ+ V+ Y FV +E R + + +++GR+WTGA AK +G Sbjct: 448 GPVLTRPLNASEQELMQNYVNRGYKLFVNRCAEGRKMSTEAIEKVAEGRVWTGAMAKDLG 507 Query: 223 LIDVVGG 229 L+D +GG Sbjct: 508 LVDELGG 514 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 11/136 (8%) Query: 84 EAIFRAIQKVKNR--------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 EA + ++++++N K ++ + A YL S A II+ + S +G G Sbjct: 106 EASYASLEEIRNALLDFKESGKFIVAYADQYAQGMYYLSSVADKIIINPQGS-IGWHGAG 164 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLV 193 Q + K + KLG+ ++ + K+ PF +E++P + M + ++S +H + V Sbjct: 165 MQPVFFKNLVSKLGLEVQVFRVGTYKSAVEPFIATEMSPANREQMTECLESVWHRILADV 224 Query: 194 SESRNIPYDKTLVLSD 209 S+SR IP D +D Sbjct: 225 SDSRRIPTDTLNAYAD 240 >gi|254882872|ref|ZP_05255582.1| protease IV [Bacteroides sp. 4_3_47FAA] gi|319639672|ref|ZP_07994407.1| protease IV [Bacteroides sp. 3_1_40A] gi|254835665|gb|EET15974.1| protease IV [Bacteroides sp. 4_3_47FAA] gi|317388703|gb|EFV69547.1| protease IV [Bacteroides sp. 3_1_40A] Length = 593 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 6/187 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D Q++ + + ++ +D A+++ ++SPGGSAY + I+R + ++K +KPVI + + AA Sbjct: 328 DVQKMCKDLRKLRDNDDVKAVVLRVNSPGGSAYGSDQIWREVVRLKEKKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S GY ISCA+N I A T+L GSIG+ Y K F + LG++ VK++ M + Sbjct: 388 SGGYYISCAANRIFADPTTLTGSIGIFGMMYSGEKLFTETLGLNFDVVKTNKMADLGASL 447 Query: 168 SEV-----NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 V N ++MQ+ V+ Y FV +E R + + +++GR+WTGA AK +G Sbjct: 448 GPVLTRPLNASEQELMQNYVNRGYKLFVNRCAEGRKMSTEAIEKVAEGRVWTGAMAKDLG 507 Query: 223 LIDVVGG 229 L+D +GG Sbjct: 508 LVDELGG 514 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 11/136 (8%) Query: 84 EAIFRAIQKVKNR--------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 EA + ++++++N K ++ + A YL S A II+ + S +G G Sbjct: 106 EASYASLEEIRNALLDFKESGKFIVAYADQYAQGMYYLSSVADKIIINPQGS-IGWHGAG 164 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLV 193 Q + K + KLG+ ++ + K+ PF +E++P + M + ++S +H + V Sbjct: 165 MQPVFFKNLVSKLGLEVQVFRVGTYKSAVEPFIATEMSPANRKQMTECLESVWHRILADV 224 Query: 194 SESRNIPYDKTLVLSD 209 S+SR IP D +D Sbjct: 225 SDSRRIPTDTLNAYAD 240 >gi|329961656|ref|ZP_08299715.1| signal peptide peptidase SppA [Bacteroides fluxus YIT 12057] gi|328531648|gb|EGF58482.1| signal peptide peptidase SppA [Bacteroides fluxus YIT 12057] Length = 589 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S ++I+ + ++ D++ A+++ ++SPGGSAY E I+ A+ ++K KPVI + + AA Sbjct: 329 NSVKVIKDLRKLKEDENVKAVVLRVNSPGGSAYGSEQIWYAVSELKKEKPVIVSMGDYAA 388 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ISC ++ IVA T+L GSIG+ +P K DK+G++ VK++ Sbjct: 389 SGGYYISCNADTIVAEPTTLTGSIGIFGMFPNAKGLTDKIGLNFDVVKTNQYADFGMLTR 448 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +N +MQ V+ Y F+ S+ R I ++ ++ GR+WTG+ AK++GL+D +G Sbjct: 449 PMNDGEKGLMQMYVNQGYDLFLTRCSDGRGIGKEELDKIAQGRVWTGSTAKELGLVDELG 508 Query: 229 GQEEVWQ-SLYALGVD 243 G ++ + ++ GVD Sbjct: 509 GLDKAVEIAIAKSGVD 524 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 45/220 (20%), Positives = 93/220 (42%), Gaps = 14/220 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ ++ + + +S + E I A++ K I + + Sbjct: 81 DILSSIKKAKENEEIKGIYIQATSLATGFASLEEIRSALKDFKESGKFIVAYGDTYSQGL 140 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 141 YYLSSVADKVLLNPQGMIEWRGLAAAPMFFKDLLAKIGVEMQVFKVGTYKSAVEPFVSTE 200 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--TGAEAKKVGLIDVV 227 ++P + + + S + V+ESR + D ++D I E+ K GL D + Sbjct: 201 MSPANREQVNVYLASIWGQLTSDVAESRKVSVDSLNAIADRMIMFHPAEESVKCGLADTL 260 Query: 228 GGQEEVWQSLYAL-GVDQSIR----KIKDW-----NPPKN 257 + +V L A+ G+D+ R +KD N PK+ Sbjct: 261 IYKNDVRNYLKAMAGIDEDDRMPVLGLKDMVNVKKNAPKD 300 >gi|289578008|ref|YP_003476635.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter italicus Ab9] gi|289527721|gb|ADD02073.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter italicus Ab9] Length = 305 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 128/224 (57%), Gaps = 11/224 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL----------IERIERISRDDS 65 S+V++ V V S + I I G I + + +E+I + D++ Sbjct: 19 SIVSMFVSMPQQDKGVATASNTIGVIMIEGVIGQTTNILGIPQNINDPVEQIRKAQEDNA 78 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAA 124 A++V ++SPGGSA I++ ++K+K +I + + AAS GY+++ A +IIVA Sbjct: 79 VRAVVVKINSPGGSAAKSIEIYKELKKLKKTGKKIIVSMGDAAASGGYMVAAAGDIIVAN 138 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ +++Q V++ Sbjct: 139 PATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDIGSPTRDLTPEEKKILQGVIED 198 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ +VSE R +P DK L+DGRI+TG +A KVGL+D +G Sbjct: 199 TFQQFLEIVSEGRKMPIDKVKELADGRIFTGRQALKVGLVDKLG 242 >gi|159905972|ref|YP_001549634.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C6] gi|159887465|gb|ABX02402.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C6] Length = 307 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 113/178 (63%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + I+ I+ +D + A+++ ++SPGG A A E + R I++ ++K VI + M SA Sbjct: 63 NDYIKWIDDAEKDSNIKAIVIKINSPGGEAIASEKLARKIKEASDKKVVIAYIETMGTSA 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y + +++ IVA + +LVG+IGV Q + ++KLG++I ++KS K SP + Sbjct: 123 AYQAASSTDYIVAEKQALVGNIGVRMQIIHYYGLMEKLGINISTIKSGEYKDMGSPTRPM 182 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +M + +VD SY+ FV V+E+RN+ ++TL ++DG+I++G +A+KVGL+D+ G Sbjct: 183 TEEEQKMFESIVDESYYEFVSWVAENRNMTINETLEVADGKIYSGTQAQKVGLVDMTG 240 >gi|189459815|ref|ZP_03008600.1| hypothetical protein BACCOP_00445 [Bacteroides coprocola DSM 17136] gi|189433425|gb|EDV02410.1| hypothetical protein BACCOP_00445 [Bacteroides coprocola DSM 17136] Length = 588 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 120/211 (56%), Gaps = 8/211 (3%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ D S G+ +S+++I+ + ++ D+S A+++ ++SPGGSAY Sbjct: 309 VYYAYGEIDGDESAD-------GEGINSEKVIKDLRKLREDESVKAVVLRVNSPGGSAYG 361 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+R + +K KPVI + + AAS GY ISCA++ IVA T+L GSIG+ P + Sbjct: 362 SEQIWREVSLLKQEKPVIVSMGDYAASGGYYISCAADWIVAEPTTLTGSIGIFGLVPNAE 421 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L DKLG++ VK++ + N + +MQ +V+ Y F + ++ R + Sbjct: 422 GLLKDKLGLNFDVVKTNELADLGDLTRPFNEEEKALMQGMVNKGYELFTKRCADGRKMNI 481 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +++GR+WTG AK + L+D +GG +E Sbjct: 482 EDIKKIAEGRVWTGEMAKDLKLVDELGGLDE 512 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 2/153 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I + +D + + + + +AI RA+ K I + Sbjct: 82 DILTSIRKAKENDKIKGIYIDAGAFACQTASMQAIRRALVDFKESGKFIVAYAGAYSQGT 141 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y I+ ++ ++A + +G G+ Q ++K LDK+GV ++ + K+ P+ +E Sbjct: 142 YYIASVADKVIANPSGSIGWHGLSAQTMFLKGLLDKVGVEMQVFRVGTYKSAVEPYIATE 201 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 ++P + Q + S + + VSESR I D Sbjct: 202 MSPANREQTQAFIGSIWQQILNEVSESRKISVD 234 >gi|325299675|ref|YP_004259592.1| signal peptide peptidase SppA, 67K type [Bacteroides salanitronis DSM 18170] gi|324319228|gb|ADY37119.1| signal peptide peptidase SppA, 67K type [Bacteroides salanitronis DSM 18170] Length = 588 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 111/183 (60%), Gaps = 7/183 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ + + R+ D+S A++ ++SPGGSA+ E I+R I +K +KPVI + + AAS Sbjct: 330 EKVAKDLRRLREDESVKAVVFRVNSPGGSAFGSEEIWREITLLKEQKPVIVSMGDYAASG 389 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKS---SPMKAEPSP 166 GY I+CA++ I+A T+L GSIG+ P + L DKLG+ VK+ S + P Sbjct: 390 GYYIACAADWIIAQPTTLTGSIGIFGYIPNAEKLLNDKLGIHFDGVKTNKLSDLGDISRP 449 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F+E + +MQ++V+ Y F + ++ R +P D+ +++GR+WTG AK + L+D Sbjct: 450 FTE---EETALMQNMVNHGYELFTQRCADGRKMPVDEIKRIAEGRVWTGKMAKDLKLVDE 506 Query: 227 VGG 229 +GG Sbjct: 507 LGG 509 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EPSPFSE 169 YL S A + + + SL G G+ Q ++K LDK+GV ++ + K+ EP +E Sbjct: 143 YLASVADKVAINPQGSL-GWHGLATQTYFLKDLLDKIGVEMQIFRVGTYKSAVEPYTSTE 201 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGAEAK-KVGLIDVV 227 ++P + Q +S + V V+ SR IP D L+D + AE K GL D + Sbjct: 202 MSPANREQTQAFANSIWGQMVDEVAASRRIPADSLNALADRNMDLQPAELYIKTGLADTL 261 Query: 228 GGQEEVWQSLYAL 240 Q+E+ L L Sbjct: 262 MYQDEMLAYLKQL 274 >gi|255036559|ref|YP_003087180.1| signal peptide peptidase SppA, 67K type [Dyadobacter fermentans DSM 18053] gi|254949315|gb|ACT94015.1| signal peptide peptidase SppA, 67K type [Dyadobacter fermentans DSM 18053] Length = 588 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++ ++ ++ I +D A+++ ++SPGGSA A + ++R IQ +KPVI + ++AAS Sbjct: 327 SEKFVKELKEIRENDKIKAVVIRINSPGGSALASDVMWREIQLTAKKKPVIASMSDVAAS 386 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFS 168 GY ++ + IVA ++ GSIG+ V F+ +KLG++ V +SP P+ Sbjct: 387 GGYYMAMGCDTIVAQPNTITGSIGIFGLIFNVTDFMNNKLGITFDGVGTSPHADWPTATR 446 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E+ M+Q V+ Y F R +E R +P +K L+ GR+W+G EAK+ GL+DV+G Sbjct: 447 EMTEFEKGMIQKSVNEGYETFTRKAAEGRKMPVEKLKSLAQGRVWSGVEAKQNGLVDVLG 506 Query: 229 G 229 G Sbjct: 507 G 507 >gi|15607042|ref|NP_214424.1| proteinase IV [Aquifex aeolicus VF5] gi|2984291|gb|AAC07815.1| proteinase IV [Aquifex aeolicus VF5] Length = 283 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 119/195 (61%), Gaps = 3/195 (1%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +A + + G I + L+ +IER+ + AL++ + SPGGS A + I+RAI++ K+ Sbjct: 33 RIAVLKLSGVIVNPYPLVNKIERLKDSKNVVALVLRVDSPGGSVGASQEIYRAIERFKSA 92 Query: 97 -KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ + +AAS GY +S A N I A E ++ GSIGV+ Q+ K ++KLG+ ++ Sbjct: 93 GKPVVISMGNVAASGGYYVSAAGNYIFANEGTITGSIGVIIQHVAYKKLVEKLGIEATAI 152 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIW 213 K+ K SPF E+ + + +Q++V+ + F++ + + R+ I +K ++DGRI+ Sbjct: 153 KTGKFKDTLSPFRELTQEEKEYLQNLVNEALEQFIQAILKYRSNKISEEKLREIADGRIF 212 Query: 214 TGAEAKKVGLIDVVG 228 TG +A ++GL+D +G Sbjct: 213 TGRQALELGLVDELG 227 >gi|189425554|ref|YP_001952731.1| signal peptide peptidase SppA, 36K type [Geobacter lovleyi SZ] gi|189421813|gb|ACD96211.1| signal peptide peptidase SppA, 36K type [Geobacter lovleyi SZ] Length = 295 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 115/195 (58%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 + P V + ++G I DS E I ++ ++ DS A+++ + SPGG + I+ ++K+ Sbjct: 41 SGPGVGLVEVKGMIVDSTEPIRQLRHFAKKDSVKAVVLRIDSPGGVVGPSQEIYEEVRKL 100 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 RK V+ + +AAS GY I+ +++I A ++ SIGVL ++ ++ KLGVS Sbjct: 101 AARKKVVVSMGSLAASGGYYIAAPASVIYANPGTITASIGVLIKFSNLEGLFGKLGVSST 160 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++K+ K +P ++P+ M Q ++DS++ FV+ V+E R +P D+ ++DGR+ Sbjct: 161 TIKTGSFKDAGAPDRPLSPEDRAMFQALIDSTHEQFVKAVAEGRKLPVDEVRRIADGRVL 220 Query: 214 TGAEAKKVGLIDVVG 228 +G +A+ + L+D +G Sbjct: 221 SGEQARALKLVDKLG 235 >gi|265757003|ref|ZP_06090865.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_33FAA] gi|263233502|gb|EEZ19131.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_33FAA] Length = 593 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D Q++ + + ++ +D A+++ ++SPGGSAY + I+R + ++K +KPVI + + AA Sbjct: 328 DVQKMCKDLRKLRDNDDVKAVVLRVNSPGGSAYGSDQIWREVVRLKEKKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMK---AEP 164 S GY ISCA++ I A T+L GSIG+ Y K F + LG++ VK++ M A Sbjct: 388 SGGYYISCAADRIFADPTTLTGSIGIFGMMYSGEKLFTETLGLNFDVVKTNKMADLGASL 447 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P +N ++MQ+ V+ Y FV +E R + + +++GR+WTGA AK +G Sbjct: 448 GPILTRPLNASEQELMQNYVNRGYKLFVSRCAEGRKMSTEAIEKVAEGRVWTGAMAKDLG 507 Query: 223 LIDVVGG 229 LID +GG Sbjct: 508 LIDELGG 514 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%) Query: 84 EAIFRAIQKVKNR--------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 EA + ++++++N K ++ + A YL S A II+ + S +G G Sbjct: 106 EASYASLEEIRNALLDFKESGKFIVAYADQYAQKMYYLSSVADKIIINPQGS-IGWHGAG 164 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLV 193 Q + K + KLG+ I+ + K+ PF +E++P + M + ++S ++ V Sbjct: 165 MQPVFFKNLVSKLGLEIQVFRVGTYKSAVEPFIATEMSPANREQMTECLESVWNRIQADV 224 Query: 194 SESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 S+SR+IP D +D + E + GL D + + EV L L Sbjct: 225 SDSRHIPTDTLNAYADRYMDFCQAEEYVQCGLADTLMYKNEVISYLKQL 273 >gi|261403174|ref|YP_003247398.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus vulcanius M7] gi|261370167|gb|ACX72916.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus vulcanius M7] Length = 311 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 119/193 (61%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +D++ I ++++ +D+S +++ ++SPGG A E + R + ++ +KPV+ V ++ Sbjct: 67 KDARYYINLLDKLEKDNSVKGVLLIVNSPGGEVIASEKLARKVAELAKKKPVVVYVEDLD 126 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS Y+ S +N IVA + S+VGSIGV + + KLG+++ ++K+ K SP+ Sbjct: 127 ASGAYMASVPANYIVAEKHSIVGSIGVRMDIIHYYGLMKKLGINVTTIKAGKYKDIGSPY 186 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + + +Q +++ +Y FV+ V++ R++P + T ++DG+I++G +AKKVGL+D V Sbjct: 187 RPMTKEEKEYLQKMINETYIDFVKWVAKYRHLPLNYTFKIADGKIYSGEDAKKVGLVDEV 246 Query: 228 GGQEEVWQSLYAL 240 G +E + L L Sbjct: 247 GTEETALKKLEQL 259 >gi|332827777|gb|EGK00512.1| signal peptide peptidase SppA, 67K type [Dysgonomonas gadei ATCC BAA-286] Length = 584 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 123/224 (54%), Gaps = 11/224 (4%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------SQELIERIERISRDDS 65 + S+ +T V F S +D +A + G I D S+ ++ +E++ +D Sbjct: 285 LASVKDMTTVPFENKSKSKD---IIAILYAEGSITDGSGTDGITSKRFVKELEKLKDNDK 341 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A++ ++SPGGSAYA E I++A+ +K +KPV+ + + AAS GY ISC ++ I+A Sbjct: 342 VKAVVFRVNSPGGSAYASEQIWKAVTDLKEKKPVVVSMGDYAASGGYYISCNASKIIAQP 401 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +L GSIG+ +P V+ K+G++ +VK++ + + ++Q+ ++ Sbjct: 402 NTLTGSIGIFGMFPNVEGLTKKVGLTFDNVKTNKLADFGDLTRPMRDDEKAILQNYIERG 461 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 Y F+ S+ R I + ++ GR+WTG +A K+GL+D +GG Sbjct: 462 YDLFLTRCSDGRGIDKNSLDSIAQGRVWTGNQALKIGLVDELGG 505 >gi|89100078|ref|ZP_01172947.1| signal peptide peptidase [Bacillus sp. NRRL B-14911] gi|89085168|gb|EAR64300.1| signal peptide peptidase [Bacillus sp. NRRL B-14911] Length = 358 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 138/267 (51%), Gaps = 19/267 (7%) Query: 34 NSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGS 79 +S +A + + G I+D+ + +++++ + DDS A+I+ ++SPGG Sbjct: 80 SSKKIAVLNVDGTIQDAGDASSLFASPGYNHKSFMKKLDHVKEDDSVKAVILRVNSPGGG 139 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I I +++ +KPV + MAAS GY IS + I A+ +L GS+GV+ Q Sbjct: 140 VVESSEIHDKIVEIQKEAKKPVYISMGSMAASGGYYISAPAEKIYASPETLTGSLGVIMQ 199 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +K GV ++KS P K SP E+ + +++Q ++D+SY FV+++SE R Sbjct: 200 GYNYAGLAEKYGVEFVTIKSGPYKDIMSPSREMTEEEREILQSMIDNSYEGFVKVISEGR 259 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 IP D+ ++DGRI+ G +AK++ LID G E+V L D ++ + + +N Sbjct: 260 GIPADQVRKIADGRIYDGRQAKELNLIDGFGFFEDVVDELEK---DHKLKGAQVVSYSEN 316 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKV 284 F L ++ ++ D I + K+ Sbjct: 317 MGFGSLFSMGARKVMGDDIEMAGMMKL 343 >gi|212692949|ref|ZP_03301077.1| hypothetical protein BACDOR_02450 [Bacteroides dorei DSM 17855] gi|237723560|ref|ZP_04554041.1| protease IV [Bacteroides sp. D4] gi|212664505|gb|EEB25077.1| hypothetical protein BACDOR_02450 [Bacteroides dorei DSM 17855] gi|229438111|gb|EEO48188.1| protease IV [Bacteroides dorei 5_1_36/D4] Length = 593 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D Q++ + + ++ +D A+++ ++SPGGSAY + I+R + ++K +KPVI + + AA Sbjct: 328 DVQKMCKGLRKLRDNDDVKAVVLRVNSPGGSAYGSDQIWREVVRLKEKKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMK---AEP 164 S GY ISCA++ I A T+L GSIG+ Y K F + LG++ VK++ M A Sbjct: 388 SGGYYISCAADRIFADPTTLTGSIGIFGMMYSGEKLFTETLGLNFDVVKTNKMADLGASL 447 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P +N ++MQ+ V+ Y FV +E R + + +++GR+WTGA AK +G Sbjct: 448 GPILTRPLNASEQELMQNYVNRGYKLFVSRCAEGRKMSTEAIEKVAEGRVWTGAMAKDLG 507 Query: 223 LIDVVGG 229 L+D +GG Sbjct: 508 LVDELGG 514 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 13/169 (7%) Query: 84 EAIFRAIQKVKNR--------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 EA + ++++++N K ++ + A YL S A II+ + S +G G Sbjct: 106 EASYASLEEIRNALLDFKESGKFIVAYADQYAQKMYYLSSVADKIIINPQGS-IGWHGAG 164 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLV 193 Q + K + KLG+ I+ + K+ PF +E++P + M + ++S ++ V Sbjct: 165 MQPVFFKNLVSKLGLEIQVFRVGTYKSAVEPFIATEMSPANREQMTECLESVWNRIQADV 224 Query: 194 SESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 S+SR+IP D +D + E + GL D + ++EV L L Sbjct: 225 SDSRHIPTDTLNAYADRYMDFCQAEEYVQCGLADTLMYKDEVISYLKQL 273 >gi|237708460|ref|ZP_04538941.1| protease IV [Bacteroides sp. 9_1_42FAA] gi|229457681|gb|EEO63402.1| protease IV [Bacteroides sp. 9_1_42FAA] Length = 593 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D Q++ + + ++ +D A+++ ++SPGGSAY + I+R + ++K +KPVI + + AA Sbjct: 328 DVQKMCKGLRKLRDNDDVKAVVLRVNSPGGSAYGSDQIWREVVRLKEKKPVIVSMGDYAA 387 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMK---AEP 164 S GY ISCA++ I A T+L GSIG+ Y K F + LG++ VK++ M A Sbjct: 388 SGGYYISCAADRIFADPTTLTGSIGIFGMMYSGEKLFTETLGLNFDVVKTNKMADLGASL 447 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P +N ++MQ+ V+ Y FV +E R + + +++GR+WTGA AK +G Sbjct: 448 GPILTRPLNASEQELMQNYVNRGYKLFVSRCAEGRKMSTEAIEKVAEGRVWTGAMAKDLG 507 Query: 223 LIDVVGG 229 L+D +GG Sbjct: 508 LVDELGG 514 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 13/169 (7%) Query: 84 EAIFRAIQKVKNR--------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 EA + ++++++N K ++ + A YL S A II+ + S +G G Sbjct: 106 EAPYASLEEIRNALLDFKESGKFIVAYADQYAQKMYYLSSVADKIIINPQGS-IGWHGAG 164 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLV 193 Q + K + KLG+ I+ + K+ PF +E++P + M + ++S +H + V Sbjct: 165 MQPVFFKNLVSKLGLEIQVFRVGTYKSAVEPFIATEMSPANREQMTECLESVWHRILADV 224 Query: 194 SESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 S+SR+IP D +D + E + GL D + ++EV L L Sbjct: 225 SDSRHIPTDTLNAYADRYMDFCQAEEYVQCGLADTLMYKDEVISYLKQL 273 >gi|297544279|ref|YP_003676581.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842054|gb|ADH60570.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 305 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 128/224 (57%), Gaps = 11/224 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL----------IERIERISRDDS 65 S+V++ V V S + I I G I + + +E+I + D++ Sbjct: 19 SIVSMFVSMPQQDKGVSTASNTIGVIMIEGVIGQTTNILGIPQNINDPVEQIRKAQEDNA 78 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAA 124 A++V ++SPGGSA I++ ++K+K +I + + AAS GY+++ A +IIVA Sbjct: 79 VRAVVVKINSPGGSAAKSIEIYKELKKLKKTGKKIIVSMGDAAASGGYMVASAGDIIVAN 138 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ ++++ V++ Sbjct: 139 PATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDIGSPTRDLTPEEKKILRGVIED 198 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ +VSE R +P DK L+DGRI+TG +A KVGL+D +G Sbjct: 199 TFQQFLEIVSEGRKMPIDKVKELADGRIFTGRQALKVGLVDKLG 242 >gi|308270374|emb|CBX26986.1| Putative protease slr0021 [uncultured Desulfobacterium sp.] Length = 297 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 112/198 (56%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V + I G I +S+E+I I++ DDS A+I+ + SPGG+ + IFR +K K Sbjct: 45 VGVVEISGIITESKEIIRNIKKYREDDSIKAIILRIDSPGGAVGPSQEIFRETRKTIGIK 104 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AAS GY I+ +N I+A ++ GSIGV+ + + L K+G+ VKS Sbjct: 105 KIIASMGTAAASGGYYIAAGTNGIMANPGTITGSIGVIIGFTNFEEILQKIGLYSVVVKS 164 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++ K +++Q VD+++ FV VS+ RN+ K ++DGRI+TG Sbjct: 165 GEYKDIGSPVRKMTEKEKKLLQTFVDNTHMQFVDAVSKGRNMDIAKVKAIADGRIFTGEM 224 Query: 218 AKKVGLIDVVGGQEEVWQ 235 AK +GL+D +G E+ + Sbjct: 225 AKNLGLVDRLGNLEDAIE 242 >gi|224024636|ref|ZP_03643002.1| hypothetical protein BACCOPRO_01364 [Bacteroides coprophilus DSM 18228] gi|224017858|gb|EEF75870.1| hypothetical protein BACCOPRO_01364 [Bacteroides coprophilus DSM 18228] Length = 589 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 111/181 (61%), Gaps = 1/181 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +S+++I + ++ D + A+++ ++SPGGSAY E I+R ++ +K KPVI + + AA Sbjct: 329 NSEKVITDLRKLREDKNIKAVVLRVNSPGGSAYGSEQIWREVKLLKEEKPVIVSMGDYAA 388 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S GY ISCA++ IVA T+L GSIG+ P + + KL + I VK++ + + Sbjct: 389 SGGYYISCAADWIVAEPTTLTGSIGIFGMVPDFSELVTQKLDLHIDGVKTNKLADLGNIA 448 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +N + ++Q V++ Y F R +E RN+P + +++GR+WTGA AK++ L+D + Sbjct: 449 RPLNAEEKALIQQSVNNGYELFTRRCAEGRNMPIEDLKKIAEGRVWTGAMAKELKLVDEL 508 Query: 228 G 228 G Sbjct: 509 G 509 >gi|114567921|ref|YP_755075.1| periplasmic serine protease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338856|gb|ABI69704.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 297 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 113/180 (62%), Gaps = 3/180 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 +++E I + + + A++V + SPGGSA A + I +++++ + KPV+T + ++ AS Sbjct: 65 DIMEAIRKAGKREDIKAVVVRIDSPGGSAGASQEIAMELERLREKGKPVVTSMGDVCASG 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+C+++ IVA SL GSIGV+ Q ++ KLG+ +++KS K S E+ Sbjct: 125 GYWIACSTDHIVANGASLTGSIGVIMQLSNLEGLYGKLGIRNQTIKSGEHKDMGSTSREL 184 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +++QD+VD SY F+ V + R I DK L ++DGRI+TG +A ++GL+D +G Sbjct: 185 SAEEEKILQDLVDDSYQQFLEQVQKGRQEKIAADKLLEIADGRIFTGKQALELGLVDSLG 244 >gi|222055988|ref|YP_002538350.1| signal peptide peptidase SppA, 36K type [Geobacter sp. FRC-32] gi|221565277|gb|ACM21249.1| signal peptide peptidase SppA, 36K type [Geobacter sp. FRC-32] Length = 298 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 142/253 (56%), Gaps = 4/253 (1%) Query: 13 VMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 V+ S+ T++V+ +S E + V + ++G I D QE +++++ + +++ A+++ Sbjct: 17 VLFSVFTISVMKSVFSDTEEAIHGEGVGLVEVKGIILDPQETVKQLQALRKNEKVKAVVL 76 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG + I A++K+ +K V+ + +AAS GY I+ + I A ++ GS Sbjct: 77 RIDSPGGVVGPSQEIHDAVKKLNMKKKVVVSMGSLAASGGYYIAVPATKIFANPGTITGS 136 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGVL ++ ++ +DK+G+ ++K+ K SP + + +M+Q V+DS++ F++ Sbjct: 137 IGVLMKFSNIEGLMDKVGMKAFTLKTGKFKDVGSPARTMTDQEKEMLQSVIDSTHGQFIK 196 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V+E R +P ++ L++GRI++G +A + LID +G ++ + LG + +I Sbjct: 197 AVAEGRKLPVEEVRSLANGRIYSGEQALALKLIDQLGTLQDAVEEAGRLGGIKGEPEI-- 254 Query: 252 WNPP-KNYWFCDL 263 PP K F DL Sbjct: 255 IRPPKKKKVFIDL 267 >gi|16080005|ref|NP_390831.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. 168] gi|221310897|ref|ZP_03592744.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. 168] gi|221315223|ref|ZP_03597028.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320141|ref|ZP_03601435.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324422|ref|ZP_03605716.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. SMY] gi|14548269|sp|O34525|SPPA_BACSU RecName: Full=Putative signal peptide peptidase sppA gi|2293234|gb|AAC00312.1| putative protease [Bacillus subtilis] gi|2635437|emb|CAB14931.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. 168] Length = 335 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 121/221 (54%), Gaps = 18/221 (8%) Query: 26 SWSSHVEDNSP--HVARIAIRGQIEDSQE--------------LIERIERISRDDSATAL 69 S +E+ SP +A + + G I+D+ + ++ +ER D + + Sbjct: 46 SQEKTLENGSPSSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGI 105 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++ ++SPGG Y I + ++++K +KP+ + MAAS GY IS A++ I A + Sbjct: 106 VLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPET 165 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GS+GV+ + DKLG+S +++KS K SP E+ + +MQ +VD+SY Sbjct: 166 LTGSLGVIMESVNYSKLADKLGISFETIKSGAHKDIMSPSREMTKEEKNIMQSMVDNSYE 225 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 FV ++S+ R +P + ++DGR++ G +AKK+ L+D +G Sbjct: 226 GFVDVISKGRGMPKAEVKKIADGRVYDGRQAKKLNLVDELG 266 >gi|241762558|ref|ZP_04760633.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372886|gb|EER62573.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 637 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 18/258 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT---------------ALI 70 S +S + N P A AI G + S E+++ R + +T AL+ Sbjct: 302 SLASFIGSNPPSSAGSAI-GVVTVSGEIVDDETRSGQVSGSTISSLILDTLAKGDIKALV 360 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 V + SPGGS A E + AI K + PVI + +AAS GY IS ++ I A +++ Sbjct: 361 VRVDSPGGSVSAAEQMRSAILAAKAKGLPVIVSMGSVAASGGYWISTPADKIFADPSTIT 420 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV P + L K+G+S VK++P+ +P F P+ Q+MQ VD+ Y F Sbjct: 421 GSIGVFSLIPTFQQTLHKIGLSADGVKTTPLSGQPDVFRGTTPEFDQLMQFGVDTIYDRF 480 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSLYALGVDQSIRK 248 +V+ SR++P DK +++GR+W+G +AKK+GL+D G Q+ V ++ +D S Sbjct: 481 TSIVASSRHLPLDKVREIAEGRVWSGVDAKKIGLVDQYGSLQDAVTEAAKRAHLDPSHTH 540 Query: 249 IKDWNPPKNYWFCDLKNL 266 ++ + ++ LKNL Sbjct: 541 MQFIDEEPSFVEMILKNL 558 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 12/188 (6%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +E++ +E+ +R+ A+++ LS GG A A+ A+ KV+ + Sbjct: 91 REVVYGLEQAARNPKIKAVVLDLSDFSGGGRAAISAVDNALDKVRAAGKPVLSFAGFYND 150 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y I+ I V +GV Y K LDKLGV K + K+ PF Sbjct: 151 ARYRIAAHGTEIWLPNLGEVALLGVGGNQLYYKGLLDKLGVETKIYRVGRFKSFVEPFTR 210 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY------DKTLVLSDGRIWTGAE-AKK 220 +E +P A Q + +S + ++ ++ +R + + T L G + AE A+ Sbjct: 211 TEQSPDAKAANQALANSLWQTTLQDIAHARPKAHVAEWALNPTSFLKSGHSF--AELAQS 268 Query: 221 VGLIDVVG 228 G+ID +G Sbjct: 269 AGMIDHIG 276 >gi|302390807|ref|YP_003826627.1| signal peptide peptidase SppA, 36K type [Acetohalobium arabaticum DSM 5501] gi|302202884|gb|ADL11562.1| signal peptide peptidase SppA, 36K type [Acetohalobium arabaticum DSM 5501] Length = 326 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 112/181 (61%), Gaps = 1/181 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 ++ E+I++I + AL++ ++SPGGS+ A + I+R ++K K KPV+ + ++A Sbjct: 69 NASEVIKQINEAKDNKKIKALLLRVNSPGGSSAASDEIYRELKKFKKTGKPVVISMGDIA 128 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S GY IS ++ I A +++ GSIGV+ Q+ ++ DKLGV + KS P K +P Sbjct: 129 TSGGYYISAIADQIYANPSTITGSIGVIMQFKNLQDLYDKLGVDSITFKSGPYKDIGNPD 188 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ + +++Q++VD Y F+ V+E R++ K L+DGRI+ G +AKK+GL+D + Sbjct: 189 RKLTAEEKELLQNMVDEVYQEFLTAVAEGRSMSKSKVEKLADGRIYNGRKAKKLGLVDEM 248 Query: 228 G 228 G Sbjct: 249 G 249 >gi|291514799|emb|CBK64009.1| signal peptide peptidase SppA, 67K type [Alistipes shahii WAL 8301] Length = 588 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 15/222 (6%) Query: 34 NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++ VA + GQI D + L +I + ++ A+++ ++SPGGSA A + Sbjct: 304 SADQVAVVYADGQIVDGEGYGKEIYGNTLAAKIAGVRDNEKVKAVVLRVNSPGGSALASD 363 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+R I+ ++ KPVI + AAS GY ISC ++ IVA + +L GSIGV + + Sbjct: 364 VIWREIELLRAEKPVIVSMGSYAASGGYYISCPADAIVADKMTLTGSIGVFGMFLDTRDA 423 Query: 145 L-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L +KLG+++ VKS+ A+ + S + P M+ VD Y F V+E RN+P K Sbjct: 424 LKNKLGITVDGVKSNA-SADFAATSPLTPLQRAMIMRGVDRVYTTFTNHVAEGRNLPIGK 482 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 L ++ GR+W G +A +VGLID GG ++ AL VD++ Sbjct: 483 VLDIAGGRVWLGKDALEVGLIDTYGG----LKTAIALAVDKA 520 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 14/224 (6%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAG--EAIFRAIQKVKNRKPVITEVHEMAASAG 111 + +E DD + + ++ GG + E + A+ + K I +E + G Sbjct: 85 LRALEAARDDDRIKGIYLRMNGTGGVTGSAILEELREALVEFKQSGKFIVAYNETYSQGG 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK----AEPSPF 167 Y ++ ++ I ++ G+ + K LDKL + + + + K EP + Sbjct: 145 YYLASVADKIYMQPEGMMEWAGLSMNLMFYKGLLDKLDLKAEVFRPTACKYKSAVEPYIY 204 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + MQ +V S + V+E+R I KTL R+ EA + GL+D Sbjct: 205 DKMSDANREQMQQLVSSMWGVIAESVAEARGIEL-KTLNEMADRLEVALPDEALEKGLVD 263 Query: 226 VVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKNLS 267 + ++++ LGV D + D+ DLKN+S Sbjct: 264 SLIYEDQMEDVFAELGVSDDYDFVTLGDYAAQVG---ADLKNIS 304 >gi|193215273|ref|YP_001996472.1| signal peptide peptidase SppA, 67K type [Chloroherpeton thalassium ATCC 35110] gi|193088750|gb|ACF14025.1| signal peptide peptidase SppA, 67K type [Chloroherpeton thalassium ATCC 35110] Length = 605 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 6/211 (2%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L++ IE + +D+S A+I+ + SPGGS A + I + + +KP++ + AAS GY Sbjct: 326 LLQSIEAVGKDESIKAMILRVDSPGGSGLASDKILSELILAQKQKPLVVSMSGTAASGGY 385 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +S +N IVA E ++ GSIGVL PY+K +K+G+ + + F E++P Sbjct: 386 WVSLNANKIVAGENTVTGSIGVLAAKPYIKELQEKIGLERNVLVRGKFADAFNFFDELSP 445 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE- 231 + + Y FV V+E RN+ + ++ GR+WTG AK++GL+D +GG + Sbjct: 446 ETYAKFDRFIGDFYEEFVEKVAEGRNMTPEAVRKIAQGRVWTGKRAKEIGLVDELGGLQT 505 Query: 232 --EVWQSLYALGVDQ-SIRKIKDWNPPKNYW 259 EV +SL G+D S+ + + PK +W Sbjct: 506 AVEVAKSL--AGIDSASMVTLVRYPRPKTFW 534 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 7/182 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 QEL+ +++ S DD ++V + S + + +AI + I + Sbjct: 73 QELLVTLKKASVDDRIDLIVVRIQSLSTQMAKLDELRQAIADYRKSGKEIWAFLSFPGDS 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 YL++ A N I + S++ G+ + Y + L+K+GV ++ K K+ P Sbjct: 133 EYLLASACNHIYLEKHSMMMLDGLKSERLYFRTPLEKMGVKVQVAKRENYKSAAEPLLRD 192 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNI---PYDKTLVLSDGRIWTGAEAKKVGLID 225 P A + Q ++D Y +V V+ SR + Y++ V++D + EA ++GL+D Sbjct: 193 APSAFDLEQRNALLDDFYESYVNAVAASRQMSRAAYER--VINDIAFVSDKEASELGLVD 250 Query: 226 VV 227 V Sbjct: 251 SV 252 >gi|301063986|ref|ZP_07204451.1| signal peptide peptidase SppA, 36K type [delta proteobacterium NaphS2] gi|300441897|gb|EFK06197.1| signal peptide peptidase SppA, 36K type [delta proteobacterium NaphS2] Length = 294 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 121/216 (56%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 V+L + L +F S + +AI G I +++ ++ + +RD++ A+I+ Sbjct: 12 VLLGGILLLTFHFFGPSTTALFKEKIGVVAINGTISSGKKISSQLAKFARDENIRAIILR 71 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG A + I+R +QK +KPVI + +AAS GY ++ + IV+ ++ GSI Sbjct: 72 INSPGGGVGATQEIYREVQKTIRQKPVIVSMGSVAASGGYYVAAPATKIVSNPGTITGSI 131 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV Q+ ++ L K+GV + VKS K SP ++ + ++++ +++ FV Sbjct: 132 GVFIQFVRLEKLLSKIGVDFEIVKSGEFKDMGSPDRKLTRRDREIIEALIEDLQGQFVSA 191 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+ R++ + +DGRI++GA AK++GL+D +G Sbjct: 192 VASGRHLSVQEVQKFADGRIFSGARAKQLGLVDFMG 227 >gi|322420579|ref|YP_004199802.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M18] gi|320126966|gb|ADW14526.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M18] Length = 293 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 125/225 (55%), Gaps = 4/225 (1%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 V + ++G I D QE+I ++ + +D+ A++ + SPGG + I+ A++ + Sbjct: 38 GGTGVGLVELKGVIVDGQEIIRQLRELRKDEDVKAVVFRVDSPGGVVGPSQEIYAAVKDL 97 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K V+ + +AAS GY +S + +I A ++ GSIGVL ++ ++ +DK+G+ Sbjct: 98 AKVKKVVVSMGSVAASGGYYVSAPATLIYANPGTITGSIGVLMKFSNIEGLMDKVGMKAF 157 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++K+ K SP + + M+Q V+DS++ FV+ V++ R +P ++ ++DGRI+ Sbjct: 158 TIKTGKFKDTGSPARSMTGEERAMLQGVIDSTHGQFVQAVAQGRKLPVEQVRGIADGRIF 217 Query: 214 TGAEAKKVGLIDVVGG-QEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +G +A + L+D +G Q+ V ++ G+ R IK PPK Sbjct: 218 SGEQALALKLVDRIGSLQDAVDEAGRLAGIKGEPRLIK---PPKK 259 >gi|332702712|ref|ZP_08422800.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] gi|332552861|gb|EGJ49905.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] Length = 305 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 114/197 (57%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 + + G I S++L+ I + RDDS +++ + SPGG + ++ A+ ++ RKPVI Sbjct: 54 VRVEGLIVGSEDLVGWIGELERDDSIKGVLLRIDSPGGVVAPSQEVYAAVLRLAERKPVI 113 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + +AAS GY I+ A+ I+A ++L GSIGV + ++ +K+G+S + S M Sbjct: 114 ASMGAVAASGGYYIAAAAQEIMANPSTLTGSIGVRMELLNIRALAEKVGLSQTLITSGEM 173 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K +PF E++P+ + + VV + FV ++++R + ++ L+DGR +TG +A Sbjct: 174 KGAGTPFREMSPREREYLTAVVMDMHDQFVSDIAQARGMEREQVAALADGRAFTGRQAHG 233 Query: 221 VGLIDVVGGQEEVWQSL 237 +GL+D +GG E+ L Sbjct: 234 LGLVDHLGGMEDAMDLL 250 >gi|239908953|ref|YP_002955695.1| putative signal peptide peptidase SppA [Desulfovibrio magneticus RS-1] gi|239798820|dbj|BAH77809.1| putative signal peptide peptidase SppA [Desulfovibrio magneticus RS-1] Length = 312 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 125/224 (55%), Gaps = 7/224 (3%) Query: 17 LVTLTVVYFSWSSHVEDNSPHV----ARIAI---RGQIEDSQELIERIERISRDDSATAL 69 LV F H E+ + ARI + G I D++E++ I ++ DD+ + Sbjct: 27 LVFGIAAAFGVFGHDEEGESLLGLAEARIGVVRVEGPINDAEEVVAFIRKLREDDTVKGV 86 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 I+ ++SPGG+ + ++ A+++++ +KPV+ +AAS GY +CA++ I + S+ Sbjct: 87 ILRINSPGGAFGPSQEMYMAVKRLRAKKPVVASFSAVAASGGYYAACAADRIFSNPGSIT 146 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ Q + + KLG+S+ S+ + +K SPF +++ + ++ +++ F Sbjct: 147 GSIGVITQLANARELMQKLGLSMDSLTTGKLKDAGSPFKQLSDEQRAYLEGLINDLNAQF 206 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V++ R + + +++DGR TGA A+ +GL+D +GGQE+ Sbjct: 207 SGDVAKERKLTPEAVALIADGRAMTGARAQAIGLVDELGGQEDA 250 >gi|303326177|ref|ZP_07356620.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. 3_1_syn3] gi|302864093|gb|EFL87024.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. 3_1_syn3] Length = 358 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 135/252 (53%), Gaps = 4/252 (1%) Query: 14 MLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 +L+LV + + FS + + +A + +RG I D + I +I R+ ++ Sbjct: 73 LLALVLIGLAVFSRDENGQGLLSGGDRLALVMVRGPIMDVAPTLAWIRKIERNPQVKGVL 132 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG A A + ++ A+ ++ ++P+ + MAAS G ++S A I A +++ G Sbjct: 133 LRVDSPGGGAAASQEVYDALARLARKRPLAVSMGSMAASGGLMVSMAGGRIFANPSTVTG 192 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV P ++ L K+GV +++ ++P K S ++P+ + V+ + FV Sbjct: 193 SIGVRMDIPQLQGLLGKIGVGQETLVTAPYKNAGSYLHPLSPEDRAYFEGVLKDMHEQFV 252 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +V++ R++P+++ L+ G+I+TG EA K+GL+D +GGQ+ + L + RK+ Sbjct: 253 DIVAKGRDMPHERAGGLASGKIFTGQEALKLGLVDELGGQDAALRWLAEQTGVPAERKLL 312 Query: 251 DWNPPKNYWFCD 262 P ++ W D Sbjct: 313 T-KPKESSWLAD 323 >gi|283853641|ref|ZP_06370875.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. FW1012B] gi|283570974|gb|EFC19000.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. FW1012B] Length = 311 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 7/223 (3%) Query: 17 LVTLTVVYFSWSSHVEDN-------SPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 LV F H E+ + + +AI G I D+ ++ I+++ +DDS + Sbjct: 27 LVIGITAAFGLLGHDEEGGRLLGAATSRIGVVAIEGPITDADAVVAFIKKLRKDDSVKGV 86 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 I+ ++SPGG+ + ++ A++K+ KPV+ +AAS GY +C ++ I A ++ Sbjct: 87 ILRVNSPGGAFGPSQEMYMAVKKLGAAKPVVASFSSVAASGGYYAACPASRIFANRGTIT 146 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ Q+ + L KLGV +S+ + +K +PF + + ++ F Sbjct: 147 GSIGVMSQFANAQDLLQKLGVHFESLTTGKLKDAGTPFKPLTDDQRAYLAGLIADLNQQF 206 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V+ R + D ++DGR TGA AK +GL+D +GGQEE Sbjct: 207 SGDVAAERKLGKDAIATIADGRAMTGARAKDLGLVDELGGQEE 249 >gi|288927850|ref|ZP_06421697.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 317 str. F0108] gi|288330684|gb|EFC69268.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 317 str. F0108] Length = 591 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 116/208 (55%), Gaps = 14/208 (6%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+++ + +E + DD A+++ ++SPGG AYA E I+ + +++ +KPV+ + + AAS Sbjct: 330 SKDICKDLEDLKNDDDIKAVVLRVNSPGGDAYASEQIWHQVTELRKKKPVVVSMGDYAAS 389 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA----EP 164 GY +SC +N IVA +L GSIG+ +P + + +KLGV VK++ A Sbjct: 390 GGYYMSCGANWIVAEPNTLTGSIGIFGVFPDLSGLVTEKLGVKFDEVKTNANSAFGNVAA 449 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 PF N + M+Q ++ Y F+ VS+ R +P ++ GR+W GA+A K+ L+ Sbjct: 450 RPF---NTAEMAMLQGYINRGYATFLNRVSQGRKMPVTNLDKIAQGRVWLGADALKIKLV 506 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDW 252 D +GG ++ + L KIKD+ Sbjct: 507 DQLGGIKDAVEKAAQLA------KIKDY 528 >gi|85859094|ref|YP_461296.1| signal peptide peptidase [Syntrophus aciditrophicus SB] gi|85722185|gb|ABC77128.1| signal peptide peptidase [Syntrophus aciditrophicus SB] Length = 309 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 111/189 (58%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 I G I+DS ++++ ++ +DDS +++ ++SPGG + I+ A+ +++ +K V+ Sbjct: 48 IDGVIKDSTDVVKNLQEFGKDDSVKGVVLRINSPGGGVAPSQEIYEAVMELRKKKRVLVS 107 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + +AAS GYLI+CA I+A +L GS+ + + + + K+GV ++KS K Sbjct: 108 MSSVAASGGYLIACAGEKIIANPGTLTGSVSAIMYFTNAEELMKKVGVKASTIKSGKYKD 167 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 SP E+ + ++Q +VD Y F+ +V +R I + ++DGRI+TG +A+++G Sbjct: 168 IGSPIREMTGEEKALLQGLVDDIYIQFLDVVVRNRRISEEALKQIADGRIFTGKQAQQLG 227 Query: 223 LIDVVGGQE 231 L+D +G E Sbjct: 228 LVDYLGDME 236 >gi|260911480|ref|ZP_05918069.1| signal peptide peptidase SppA [Prevotella sp. oral taxon 472 str. F0295] gi|260634409|gb|EEX52510.1| signal peptide peptidase SppA [Prevotella sp. oral taxon 472 str. F0295] Length = 591 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 14/208 (6%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+++ + +E + DD A+++ ++SPGG AYA E I+ + +++ +KPV+ + + AAS Sbjct: 330 SKDICKNLEDLKNDDDIKAVVLRVNSPGGDAYASEQIWHQVTELRKKKPVVVSMGDYAAS 389 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA----EP 164 GY +SC +N IVA +L GSIG+ +P + + +KLGV VK++ A Sbjct: 390 GGYYMSCGANWIVAEPNTLTGSIGIFGVFPDLSGLVTEKLGVKFDEVKTNANSAFGNIAA 449 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 PFS + M+Q V+ Y F+ VS+ R + D ++ GR+W G EA K+ L+ Sbjct: 450 RPFSATE---MAMLQGYVNRGYATFLNRVSQGRKMSVDNIDKIAQGRVWLGNEALKIKLV 506 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDW 252 D +GG +E + L K+KD+ Sbjct: 507 DQLGGIKEAVEKAAQLA------KLKDY 528 >gi|154687074|ref|YP_001422235.1| hypothetical protein RBAM_026460 [Bacillus amyloliquefaciens FZB42] gi|154352925|gb|ABS75004.1| SppA [Bacillus amyloliquefaciens FZB42] Length = 335 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 115/200 (57%), Gaps = 4/200 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 +EDN ++ G D + ++++ER D S +++ ++SPGG Y I + + Sbjct: 69 IEDNGGSAGLLSSGGY--DHRSFLKQVERAKEDKSVKGIVLKINSPGGGVYESAEIHKKL 126 Query: 91 QKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++K +KP+ + MAAS GY IS A++ I A+ +L GS+GV+ + D+L Sbjct: 127 EELKKETKKPIYVSMGSMAASGGYYISTAADKIYASPETLTGSLGVIMESVNYSKLADEL 186 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ +++KS K SP ++ + ++MQ +V+ SY FV ++S+ R++ ++ Sbjct: 187 GIKFETIKSGAHKDIMSPTRDMTKEERKIMQTMVNDSYEGFVNVISKGRHMSKADVKKIA 246 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 DGR++ G +AKK+GL+D +G Sbjct: 247 DGRVYDGRQAKKIGLVDDLG 266 >gi|332296593|ref|YP_004438516.1| signal peptide peptidase SppA, 36K type [Thermodesulfobium narugense DSM 14796] gi|332179696|gb|AEE15385.1| signal peptide peptidase SppA, 36K type [Thermodesulfobium narugense DSM 14796] Length = 289 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 4/229 (1%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERIS 61 +LK++ + L ++T+ ++ + V I I G I D S+ + I R Sbjct: 1 MLKRLSLALIFLLILTIVFSLGYMAAKFKPAGAKVGYIEINGTINDQTSESVSSAIRRAK 60 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASN 119 +D + +++ ++SPGGS A + IF + K KP+I + ++AAS GY +S A + Sbjct: 61 QDPNIRGILLRVNSPGGSVGASQEIFETLMNYKESTGKPIIVSMGDVAASGGYYVSLAGD 120 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A ++L GSIGV+ + + +G+ +++K+ K S F + PK + + Sbjct: 121 KIFALPSTLTGSIGVIANILDIHELMKNIGIKEETLKTGEYKDTGSMFRSLTPKDKEYLM 180 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ SY F+ VS RNIP DK ++DGR+++GA+AK +GLID +G Sbjct: 181 GLIGDSYGQFLYDVSTRRNIPLDKLKSIADGRVFSGAKAKSLGLIDELG 229 >gi|320449714|ref|YP_004201810.1| signal peptide peptidase SppA [Thermus scotoductus SA-01] gi|320149883|gb|ADW21261.1| signal peptide peptidase SppA [Thermus scotoductus SA-01] Length = 310 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +D ++L+ +I + D A ++ + SPGGS EAI RA++ + KP++ +A Sbjct: 60 KDLEDLLSKIRQAREDQDIRAAVLFVDSPGGSVTETEAIHRALKDLAREKPLVAAFGTVA 119 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY ++ A+ I T++ GSIGV+ P V+ L KLGV ++ +K +K S Sbjct: 120 ASGGYYVATAAREIFTPATAVTGSIGVIATLPQVQGLLAKLGVQVEVLKEGRLKDMGSGL 179 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P+ ++Q + +Y FV V+E R++P DK L+DGRI++G +A +GL D Sbjct: 180 RPLTPEERTLIQGYMREAYELFVARVAEGRHLPKDKVRQLADGRIYSGTQAIALGLADRE 239 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN---LSISSLLEDTIPLMKQTKV 284 G E+ + L + R ++ + PK L L +SS E + L+ Q + Sbjct: 240 GYLEDAAKRAAELAGLEEFRLVR-YEKPKGLLEGLLGEGFPLGLSSETEQLVSLLGQNRF 298 Query: 285 Q--------GLW 288 + GLW Sbjct: 299 RLEYRYLGGGLW 310 >gi|169832316|ref|YP_001718298.1| signal peptide peptidase SppA, 36K type [Candidatus Desulforudis audaxviator MP104C] gi|169639160|gb|ACA60666.1| signal peptide peptidase SppA, 36K type [Candidatus Desulforudis audaxviator MP104C] Length = 299 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 115/193 (59%), Gaps = 1/193 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 ++E+ +I+ + + + A+++ L+SPGGSA A + I A+ +++ KPV+ + + +A Sbjct: 63 AEEITAQIQEAADNPNIRAVVLRLNSPGGSAAASQEISEAVVRLREAGKPVVVSMGDTSA 122 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y I+C ++ IVA ++ GSIGV+ Q ++ D LG+ ++ KS P K SP Sbjct: 123 SGAYWIACHADAIVANPATITGSIGVIIQTTHLTDLYDMLGIETETFKSGPHKDMGSPDR 182 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+ + Q +VD Y FV +V+ RN+P D+ L+DGRI+TG +A ++GL+D +G Sbjct: 183 VPTPEERAIFQGMVDDIYAQFVAVVARGRNMPEDQVRKLADGRIFTGRQAYELGLVDQLG 242 Query: 229 GQEEVWQSLYALG 241 ++ ++ LG Sbjct: 243 DLQDAVRAAAELG 255 >gi|260753451|ref|YP_003226344.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552814|gb|ACV75760.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 637 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 2/201 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL+V + SPGGS A E + AI K + PVI + +AAS GY IS ++ I A + Sbjct: 358 ALVVRVDSPGGSVSAAEQMRSAILAAKAKGLPVIVSMGSVAASGGYWISTPADKIFADPS 417 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P + L K+G+S VK++P+ +P F P+ Q+MQ VD+ Y Sbjct: 418 TITGSIGVFSLIPTFQQTLHKIGLSADGVKTTPLSGQPDVFRGTTPEFDQLMQFGVDTIY 477 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSLYALGVDQS 245 F +V+ SR++P +K +++GR+W+G +AKK+GL+D G Q+ V ++ +D S Sbjct: 478 DRFTSIVASSRHLPLEKVREIAEGRVWSGVDAKKIGLVDQYGSLQDAVTEAAKRAHLDPS 537 Query: 246 IRKIKDWNPPKNYWFCDLKNL 266 ++ + ++ LKNL Sbjct: 538 HTHMQFIDEEPSFVEMILKNL 558 Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 12/188 (6%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++++ +E+ +R+ A+++ LS GG A A+ A+ KV+ + Sbjct: 91 RDVVYGLEQAARNPKIKAVVLDLSDFSGGGRAAISAVDNALDKVRAAGKPVLSFAGFYND 150 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y I+ I V +GV Y K LDKLGV K + K+ PF Sbjct: 151 ARYRIAAHGTEIWLPNLGEVALLGVGGNQLYYKGLLDKLGVETKIYRVGRFKSFVEPFTR 210 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY------DKTLVLSDGRIWTGAE-AKK 220 +E +P A Q + +S + ++ ++ +R + + T L G + AE A+ Sbjct: 211 TEQSPDAKAANQALANSLWQTTLQDIAHARPKAHVAEWALNPTSFLKSGHSF--AELAQS 268 Query: 221 VGLIDVVG 228 G+ID +G Sbjct: 269 AGIIDHIG 276 >gi|189218092|ref|YP_001938734.1| Periplasmic serine protease, ClpP class [Methylacidiphilum infernorum V4] gi|189184950|gb|ACD82135.1| Periplasmic serine protease, ClpP class [Methylacidiphilum infernorum V4] Length = 331 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 128/229 (55%), Gaps = 12/229 (5%) Query: 38 VARIAIRGQIED------SQELIERIE---RISRDDSAT-ALIVSLSSPGGSAYAGEAIF 87 +A I +RG I +Q +E I+ + +R+D +IV+++SPGG A + I+ Sbjct: 58 IALIHLRGLISQDEAGSFTQNSVEDIKVQLKAAREDKKVKGIIVAINSPGGEVNASDVIY 117 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +N KPV+ + MAAS GY + + ++A + ++ GSIGV+ + VK +DK Sbjct: 118 HEIRLTRNVKPVVIYMESMAASGGYYSAVGGSYLMANDLTITGSIGVIMESFLVKDLMDK 177 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV- 206 +G+ KS MK +P E+ P+ +Q ++D +Y+ F+ +VS+ R+I +K Sbjct: 178 VGIKAFVFKSGKMKDLLNPTREMTPEEQAFVQGLIDEAYNKFISIVSKERHIDINKLKSN 237 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 L+DGRI+ G +A K GLID +G E+ + L QS R I+ + PP Sbjct: 238 LADGRIFMGEDALKNGLIDGLGYFEDAFNKCKELSKVQSARLIR-YVPP 285 >gi|77919477|ref|YP_357292.1| signal peptide peptidase SppA, 67K type [Pelobacter carbinolicus DSM 2380] gi|77545560|gb|ABA89122.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pelobacter carbinolicus DSM 2380] Length = 298 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 109/196 (55%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + I G + S+ ++++ D S A+I+ ++SPGG+ + I + +V Sbjct: 42 RIGVVEISGMLMVSEPTVKQLVSFKEDHSIKAVILRVNSPGGAVAPSQEIHDEVARVAAL 101 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV+ + +AAS GY +S + IVA ++ GSIGV+ Q + DKLG+ + VK Sbjct: 102 KPVVVSMASVAASGGYYVSIPAQRIVANPGTITGSIGVIMQTTNYQELYDKLGLKNEVVK 161 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S K SP + P +++Q V+D Y FV VS+ R +P +K L+DGRI+TG Sbjct: 162 SGQHKDLGSPLRPMTPADRKILQGVIDDVYDQFVSAVSKGRKLPVEKVRTLADGRIFTGR 221 Query: 217 EAKKVGLIDVVGGQEE 232 +A + GL+D +GG ++ Sbjct: 222 QAMQAGLVDSLGGMQD 237 >gi|169829578|ref|YP_001699736.1| putative signal peptide peptidase sppA [Lysinibacillus sphaericus C3-41] gi|168994066|gb|ACA41606.1| Putative signal peptide peptidase sppA [Lysinibacillus sphaericus C3-41] Length = 337 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 D Q +E+++ I DD+ +++S++SPGG I++ + K+K + P+ + M Sbjct: 86 DHQFFLEQLDSILYDDTIEGIVLSVNSPGGGVKESAEIYKKLLKIKEERQIPIYVSMDSM 145 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A ++ GSIGV+ Q + +K+GV ++ KS K SP Sbjct: 146 AASGGYYISAPADKIFAHRDTITGSIGVIMQSINYQALAEKVGVKFETFKSGEHKDMLSP 205 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +V P+ MMQD+++ +Y FV +V + RN+ ++DGRI G +A + GL+D Sbjct: 206 MRDVTPEERAMMQDMINETYEEFVDIVEQGRNMSEADVKKVADGRILGGTKALEAGLVDE 265 Query: 227 VGGQEEVWQSLYA-LGVDQSI 246 +G +E +L A G++ ++ Sbjct: 266 IGDEEAAIAALRADFGLEDAV 286 >gi|325281704|ref|YP_004254246.1| signal peptide peptidase SppA, 67K type [Odoribacter splanchnicus DSM 20712] gi|324313513|gb|ADY34066.1| signal peptide peptidase SppA, 67K type [Odoribacter splanchnicus DSM 20712] Length = 599 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 22/221 (9%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +E N +A + G+I Q EL + I +I D++ A+++ ++SPGGSA Sbjct: 306 IEFNKDKIAVVYASGEIGLEQKNNTIGPELAKTIRKIREDNTVKAIVLRVNSPGGSALTS 365 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+R ++ KPVI + +AAS GY ISCA++ IVA T+L GS G+ + + Sbjct: 366 DIIWREVELATQTKPVIVSMGNVAASGGYYISCAADTIVAEPTTLTGSTGIFGMFFSGEK 425 Query: 144 FL-DKLGVSIKSVKSS---------PMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVR 191 + DK+G+ VK++ P+ P P S + P ++Q+ V+ Y F+ Sbjct: 426 LIEDKMGIHTDVVKTNDHSDFGGSYPL---PLPVSNRALTPYERNVLQNYVNQGYETFLS 482 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V R + +D+ ++ GR+WTG +A K+GL+DV+GG E+ Sbjct: 483 RVMSGRGLTHDELHAIAQGRVWTGEDALKIGLVDVLGGLED 523 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 9/185 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPVITEVHEMA 107 +++ I++ ++D + + L+ G+ A + I A+QK K I + Sbjct: 83 NKILASIQKAAKDSRIQGIYLDLTEIQGNFGALAFTQEIRNALQKFKESGKFIYSYSNLG 142 Query: 108 AS--AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 S + YL + A I V ET L+ + G+ + K L KLG+ + VK K+ Sbjct: 143 YSQKSYYLATVADKIFVNPETPLLLT-GMSSSISFYKETLAKLGIQPEVVKVGKFKSAVE 201 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVG 222 PF E++P + +Q +DSS+ V+ ++ESRNIP D L++ +T + + G Sbjct: 202 PFISDEMSPANREQVQKYLDSSWGTIVKGIAESRNIPVDSINALANRFDFYTTRQFQDFG 261 Query: 223 LIDVV 227 D V Sbjct: 262 FFDGV 266 >gi|291485382|dbj|BAI86457.1| signal peptide peptidase [Bacillus subtilis subsp. natto BEST195] Length = 335 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 115/203 (56%), Gaps = 4/203 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S ++DN + + G + + ++ +ER D + +++ ++SPGG Y I Sbjct: 66 SGTIQDNGDSSSLLGADGY--NHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIH 123 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++K +KP+ + MAAS GY IS A++ I A +L GS+GV+ + Sbjct: 124 KKLEEIKKETKKPIYVSMGSMAASGGYYISAAADKIFATPETLTGSLGVIMESVNYSKLA 183 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DKLG+S +++KS K SP E+ + +MQ +VD+SY FV ++S+ R++ + Sbjct: 184 DKLGISFETIKSGAHKDIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRSMSKAEVK 243 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 ++DGR++ G +AKK+ L+D +G Sbjct: 244 KIADGRVYDGRQAKKLNLVDELG 266 >gi|317123138|ref|YP_004103141.1| signal peptide peptidase A [Thermaerobacter marianensis DSM 12885] gi|315593118|gb|ADU52414.1| signal peptide peptidase A [Thermaerobacter marianensis DSM 12885] Length = 311 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 115/185 (62%), Gaps = 1/185 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 G + + E++ ++++ D + A+++ +++PGGSA A + I A+Q++++ KPV+ + Sbjct: 62 GAVVGADEVVAQLQKARDDPAVRAVVIRMNTPGGSAAAAQEIGVAVQRLRDAGKPVVASI 121 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++ AS GY I+ ++ IVA SL GSIGV+ + + + KLG+ ++++KS P K Sbjct: 122 ADLGASGGYWIAAMADRIVANPASLTGSIGVIMEVTHYEDLYQKLGIDVETIKSGPYKDI 181 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + + +++Q +V+ Y FV +V+ R + ++ L L+DGR++TG +AK+ GL Sbjct: 182 GSATRPLTEEERRLLQGLVNDIYQQFVDVVARGRKLSRERVLELADGRVFTGRQAKEAGL 241 Query: 224 IDVVG 228 +D +G Sbjct: 242 VDELG 246 >gi|153005152|ref|YP_001379477.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] gi|152028725|gb|ABS26493.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] Length = 366 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 117/201 (58%), Gaps = 6/201 (2%) Query: 34 NSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 P VA I ++G I D+ +++++ ++++DD A++V + SPGG+ + + Sbjct: 98 TGPRVAIIEVKGPIGTGAGGADADRILKQLRKVAQDDGLKAVVVRIDSPGGAVAPSQELH 157 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++K+ +K V+ + +AAS G+ ++ A +VA +L GSIGV+ Q+P VK L++ Sbjct: 158 DEVKKLAQKKTVVCSMGNLAASGGFYVAVACPKVVAEPGTLTGSIGVITQFPKVKGLLER 217 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V +++VKS +K +PF++++ + Q ++D Y FVR V++ R + Sbjct: 218 WDVKMETVKSGALKDAGNPFADMSAEERAYWQSLIDRVYGQFVRAVAQGRGLEEAAVRKF 277 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 +DGR+ TG EAK++ L+D +G Sbjct: 278 ADGRVITGEEAKELKLVDALG 298 >gi|321312489|ref|YP_004204776.1| signal peptide peptidase [Bacillus subtilis BSn5] gi|320018763|gb|ADV93749.1| signal peptide peptidase [Bacillus subtilis BSn5] Length = 335 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 114/203 (56%), Gaps = 4/203 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S ++DN + + G + + ++ +ER D + +++ ++SPGG Y I Sbjct: 66 SGTIQDNGDSSSLLGADGY--NHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIH 123 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++K +KP+ + MAAS GY IS A++ I A +L GS+GV+ + Sbjct: 124 KKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLA 183 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DKLG+S +++KS K SP E+ + +MQ +VD+SY FV ++S+ R + + Sbjct: 184 DKLGISFETIKSGAHKDIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMSKAEVK 243 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 ++DGR++ G +AKK+ L+D +G Sbjct: 244 KIADGRVYDGRQAKKLNLVDELG 266 >gi|308174636|ref|YP_003921341.1| signal peptide peptidase [Bacillus amyloliquefaciens DSM 7] gi|307607500|emb|CBI43871.1| signal peptide peptidase [Bacillus amyloliquefaciens DSM 7] gi|328554562|gb|AEB25054.1| signal peptide peptidase [Bacillus amyloliquefaciens TA208] gi|328912966|gb|AEB64562.1| signal peptide peptidase [Bacillus amyloliquefaciens LL3] Length = 335 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 120/216 (55%), Gaps = 18/216 (8%) Query: 31 VEDNSP--HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLS 74 +++ SP +A + + G IEDS E ++ IER D + +++ ++ Sbjct: 51 LDEGSPGSKIAVLEVDGTIEDSGESAGLLSSGGYDHRSFLKHIERAKEDKNVKGIVLKIN 110 Query: 75 SPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG Y I + ++++K +KP+ + MAAS GY IS A++ I A+ +L GS+ Sbjct: 111 SPGGGVYESAEIHKKLEELKKETKKPIYVSMGSMAASGGYYISTAADKIYASPETLTGSL 170 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + D+LG+ +++KS K SP ++ + ++MQ +V+ SY FV + Sbjct: 171 GVIMESVNYSKLADELGIKFETIKSGAHKDIMSPTRDMTKEERKIMQTMVNDSYEGFVNV 230 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +S+ R++ ++DGR++ G +AKK+GL+D +G Sbjct: 231 ISKGRHMSKADVKKIADGRVYDGRQAKKIGLVDELG 266 >gi|295398025|ref|ZP_06808081.1| U7 family peptidase [Aerococcus viridans ATCC 11563] gi|294973783|gb|EFG49554.1| U7 family peptidase [Aerococcus viridans ATCC 11563] Length = 362 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 130/251 (51%), Gaps = 20/251 (7%) Query: 33 DNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSA 80 D + VA + I G I D+ Q +++ IE I +D+ AL+++++SPGG Sbjct: 74 DTNRQVAVLEIDGTIADNSGSGAFSEGMDYQGILDAIEGIKENDNIQALLLTVNSPGGGV 133 Query: 81 YAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y ++ A+ +K + P+ + +MAAS GY+IS + I + GSIGV+ Q Sbjct: 134 YESTELYNALLDLKESREIPIYVSMGQMAASGGYMISMVGDQIYTDSETTTGSIGVIMQV 193 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P F+++ G+++ + KS +K S F + + ++ + Y+ FV +V+ R Sbjct: 194 PNFSGFMEEHGLAMDTYKSGALKDMGSSFRGASDEEKNVLNSFIQEKYNRFVEIVANGRG 253 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR--KIKDWNPPK 256 + D L+DGRI++G++A + GL D +G +E+ +L AL D ++ + D++P Sbjct: 254 MSTDDVKKLADGRIYSGSQAVENGLADQIGYEED---ALAALRADNNLETATVVDYSPTS 310 Query: 257 -NYWFCDLKNL 266 W D +L Sbjct: 311 ATSWLTDFMSL 321 >gi|56552823|ref|YP_163662.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ZM4] gi|56544397|gb|AAV90551.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ZM4] Length = 637 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 18/258 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT---------------ALI 70 S +S + N P A AI G + S E+++ R + +T AL+ Sbjct: 302 SLASFIGANPPSSAGSAI-GVVTVSGEIVDDETRSGQVSGSTISSLLLDTLAKGDIKALV 360 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 V + SPGGS A E + AI K + PVI + +AAS GY IS ++ I A +++ Sbjct: 361 VRVDSPGGSVSAAEQMRSAILAAKAKGLPVIVSMGSVAASGGYWISTPADKIFADPSTIT 420 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV P + L K+G+S VK++P+ +P F P+ Q+MQ VD+ Y F Sbjct: 421 GSIGVFSLIPTFQQTLHKIGLSADGVKTTPLSGQPDVFRGTTPEFDQLMQFGVDTVYDRF 480 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSLYALGVDQSIRK 248 +V+ SR++P +K +++GR+W+G +AKK+GL+D G Q+ V ++ +D S Sbjct: 481 TSIVASSRHLPLEKVREIAEGRVWSGVDAKKIGLVDQYGFLQDAVTEAAKRAHLDPSHTH 540 Query: 249 IKDWNPPKNYWFCDLKNL 266 ++ + ++ LKNL Sbjct: 541 MQFIDEEPSFVEMILKNL 558 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 12/188 (6%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +E++ +E+ +R+ A+++ LS GG A A+ A+ KV+ + Sbjct: 91 REVVYGLEQAARNPKIKAVVLDLSDFSGGGRAAISAVDNALDKVRAAGKPVLSFAGFYND 150 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y I+ I V +GV Y K LDKLGV K + K+ PF Sbjct: 151 ARYRIAAHGTEIWLPNLGEVALLGVGGNQLYYKGLLDKLGVETKIYRVGRFKSFVEPFTR 210 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY------DKTLVLSDGRIWTGAE-AKK 220 +E +P A Q + +S + ++ ++ +R + + T L G + AE A+ Sbjct: 211 TEQSPDAKAANQALANSLWQTTLQDIAHARPKAHVAEWALNPTSFLKSGHSF--AELAQS 268 Query: 221 VGLIDVVG 228 G+ID +G Sbjct: 269 AGMIDHIG 276 >gi|195953570|ref|YP_002121860.1| signal peptide peptidase SppA, 36K type [Hydrogenobaculum sp. Y04AAS1] gi|195933182|gb|ACG57882.1| signal peptide peptidase SppA, 36K type [Hydrogenobaculum sp. Y04AAS1] Length = 282 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 127/221 (57%), Gaps = 5/221 (2%) Query: 17 LVTLTVVY-FSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 L+ L V++ FS + + SP++A I +RG I + + ++IE+ +D + AL++ + Sbjct: 6 LIFLGVIFVFSLVFAFLNRRSPNIAIIRVRGVILNPLPIEKQIEKAQKDPNIKALVLRVD 65 Query: 75 SPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG+ A + I+RA++ + ++KP++ + +AAS GY IS +N I A +L SIG Sbjct: 66 SPGGAVGAAQEIYRALEIFRAHKKPIVVSMGSLAASGGYYISAPANYIYANPGTLTASIG 125 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-- 191 V+ Y K L K+GV +K+ K P+ +++ +Q ++D++Y F+ Sbjct: 126 VIIDYLNYKDLLKKIGVEQGDIKTGQYKDILVPWKKLSKDDKAYLQYLIDNTYEQFINAI 185 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 L S I + L ++DGR+ TG +AK+VGL+D +G E+ Sbjct: 186 LAYRSNKISKQELLSIADGRVLTGVQAKEVGLVDGIGNLED 226 >gi|167753823|ref|ZP_02425950.1| hypothetical protein ALIPUT_02108 [Alistipes putredinis DSM 17216] gi|167658448|gb|EDS02578.1| hypothetical protein ALIPUT_02108 [Alistipes putredinis DSM 17216] Length = 594 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 107/178 (60%), Gaps = 2/178 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L ++ ++ R+D A+++ ++SPGGSA A + I+R ++ ++ +KPVI + AAS GY Sbjct: 337 LAAKLAKVRRNDDVKAVVLRVNSPGGSALASDVIWREVELLREKKPVIVSMGSYAASGGY 396 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVN 171 ISC ++ IVA +T+L GSIGV + ++ L +KLG++ +V+++ A+ + Sbjct: 397 YISCGADAIVADKTTLTGSIGVFGMFLRLEDALKNKLGITFDAVRTNT-SADMGVMRPLT 455 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + VD Y F V+E RN+P +K L ++ GR+W+G +A +GL+D GG Sbjct: 456 GTERAAIMRSVDEVYETFTSYVAEGRNLPLEKVLDIAGGRVWSGTDALALGLVDTNGG 513 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 9/159 (5%) Query: 76 PGGSAYAGEAIFR----AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 P G A AI A+Q + I +E GY ++ ++ I + Sbjct: 106 PNGGGVATYAILEELREALQDFRQGGKFIIAYNETYGQGGYYLASVADKIYLEPHGGMQW 165 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMK----AEPSPFSEVNPKAVQMMQDVVDSSYH 187 GV + K DKL + + + + + EP S+++ + MQ +VDS ++ Sbjct: 166 TGVSSTLMFYKGLFDKLDIQAEIFRPTACRYKSAVEPYFLSKMSNANREQMQLLVDSYWN 225 Query: 188 WFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLID 225 V+ESR I L+DG + EA G++D Sbjct: 226 VMAEAVAESRGIELSTLNRLADGLEVSLAQEALDHGMVD 264 >gi|227485721|ref|ZP_03916037.1| S49 family peptidase [Anaerococcus lactolyticus ATCC 51172] gi|227236276|gb|EEI86291.1| S49 family peptidase [Anaerococcus lactolyticus ATCC 51172] Length = 327 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 121/200 (60%), Gaps = 4/200 (2%) Query: 33 DNSPHVARIAIRGQI---EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +++ + +I++ G I E+S+ +I ++ ++D + +I++++SPGGS Y E I + Sbjct: 57 NSAEKIRKISLEGVIQGDENSEFVISELKDAAKDPTTKGVILTVNSPGGSVYVSEKIAKE 116 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I+ +K +K PV + + EMAAS GY IS ++ I A+ +L GSIGV+ + +K Sbjct: 117 IKSLKAKKIPVYSVMEEMAASGGYYISAPTDRIYASNETLTGSIGVIMGGRSFQGLFEKY 176 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ ++V S MK + ++N + +Q +VDS++ FV++VSE R++ L+ Sbjct: 177 GIKEQNVVSGKMKDTGTMGRDLNAEEKAYLQALVDSAFGRFVKIVSEGRHMSEKDVRKLA 236 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 DGR++ GA+A K GL+D +G Sbjct: 237 DGRVYDGAQAVKNGLVDKIG 256 >gi|126651359|ref|ZP_01723566.1| SppA [Bacillus sp. B14905] gi|126591888|gb|EAZ85971.1| SppA [Bacillus sp. B14905] Length = 337 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 108/193 (55%), Gaps = 2/193 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 D Q +++++ I DD+ +++S++SPGG I++ + K+K + P+ + M Sbjct: 86 DHQFFLDQLDNILYDDTIQGIVLSVNSPGGGVKESAEIYKKLLKIKEERQIPIYVSMDSM 145 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A ++ GSIGV+ Q + +K+GV ++ KS K SP Sbjct: 146 AASGGYYISAPADKIFAHRDTITGSIGVIMQSINYQALAEKVGVKFETFKSGEHKDMLSP 205 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +V P+ MMQD+++ +Y FV +V + RN+ ++DGRI G +A + GL+D Sbjct: 206 MRDVTPEERAMMQDMINETYEEFVDIVEQGRNMSEADVKKVADGRILGGTKALEAGLVDE 265 Query: 227 VGGQEEVWQSLYA 239 +G +E +L A Sbjct: 266 IGDEEAAIAALRA 278 >gi|83815032|ref|YP_446454.1| signal peptide peptidase SppA, 67K type [Salinibacter ruber DSM 13855] gi|83756426|gb|ABC44539.1| signal peptide peptidase SppA, 67K type [Salinibacter ruber DSM 13855] Length = 746 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 5/186 (2%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q S L E +E D A+++ ++SPGGSA A EA++RA+++ N KPVI + + Sbjct: 476 QALGSTPLTEALETARTDSRTEAVVLRVNSPGGSAAASEAMWRAVKRTANEKPVIVSMGD 535 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGV---LFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 +AAS GY ++ ++ I+A T+ GSIGV LF + F +KLGV+ V++ P Sbjct: 536 VAASGGYYLAAGADSIMADPTTTTGSIGVFGILFNAEGL--FEEKLGVTFDGVRTGPYAD 593 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S ++P +++ +D +Y+ F+R V+++RN+ + ++ GR+W+G +AK+VG Sbjct: 594 LYSTTKPLSPDERRLVGGSIDQTYNTFLRRVADARNMDVEAVDEVAQGRVWSGRDAKEVG 653 Query: 223 LIDVVG 228 L+D G Sbjct: 654 LVDTTG 659 >gi|78355555|ref|YP_387004.1| signal peptide peptidase A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217960|gb|ABB37309.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 280 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 111/200 (55%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 I ++G + D+ ++ E + RD +++ ++SPGG+ + + A++++ KPV+ Sbjct: 36 INVQGMLLDTTPYVDFAEELRRDPDVRGVLLRVNSPGGAVAPSQELHDAVKRLATSKPVV 95 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + AAS GY IS + IVA ++L SIGV + V + LG+ ++ S + Sbjct: 96 VSMGAAAASGGYYISVPATRIVANPSTLTASIGVKMEMGNVHELMKALGIHHVALTSGEL 155 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K SPF+E+ P+ + +Q VV Y FV+ V+E R++P + +++DGR TG +A + Sbjct: 156 KNAGSPFAEMTPREREYLQSVVMDMYDQFVQAVAEGRHLPPEDVRLVADGRAMTGRQALQ 215 Query: 221 VGLIDVVGGQEEVWQSLYAL 240 GL+D++G + Q L L Sbjct: 216 AGLVDMLGDRHTAMQELLRL 235 >gi|294508389|ref|YP_003572447.1| Protease IV [Salinibacter ruber M8] gi|294344717|emb|CBH25495.1| Protease IV [Salinibacter ruber M8] Length = 746 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 5/186 (2%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q S L E +E D A+++ ++SPGGSA A EA++RA+++ N KPVI + + Sbjct: 476 QALGSTPLTEALETARTDSRTEAVVLRVNSPGGSAAASEAMWRAVKRTANEKPVIVSMGD 535 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGV---LFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 +AAS GY ++ ++ I+A T+ GSIGV LF + F +KLGV+ V++ P Sbjct: 536 VAASGGYYLAAGADSIMADPTTTTGSIGVFGILFNAEGL--FEEKLGVTFDGVRTGPYAD 593 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S ++P +++ +D +Y+ F+R V+++RN+ + ++ GR+W+G +AK+VG Sbjct: 594 LYSTTKPLSPDERRLVGGSIDQTYNTFLRRVADARNMDVEAVDEVAQGRVWSGRDAKEVG 653 Query: 223 LIDVVG 228 L+D G Sbjct: 654 LVDTTG 659 >gi|313902826|ref|ZP_07836223.1| signal peptide peptidase A [Thermaerobacter subterraneus DSM 13965] gi|313466946|gb|EFR62463.1| signal peptide peptidase A [Thermaerobacter subterraneus DSM 13965] Length = 318 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 114/185 (61%), Gaps = 1/185 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 G + + +++ ++++ D + A+++ +++PGGSA A + I A+Q+++ KPV+ + Sbjct: 69 GAVVGADDIVSQLQQAREDPAVAAVVIRMNTPGGSAAAAQEIGVAVQRLREAGKPVVVSI 128 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++ AS GY I+ ++ IVA SL GSIGV+ + + + +KLG+ ++++KS P K Sbjct: 129 GDLGASGGYWIAAMADRIVANPASLTGSIGVIMEVTHYEDLYEKLGIDVETIKSGPFKDI 188 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + + +++Q +V+ Y FV +V+ R + ++ L L+DGR++TG +AK GL Sbjct: 189 GSATRPLTAEERRLLQGLVNDIYQQFVDVVARGRGMSRERVLELADGRVFTGRQAKAEGL 248 Query: 224 IDVVG 228 +D +G Sbjct: 249 VDQLG 253 >gi|55981463|ref|YP_144760.1| putative protease [Thermus thermophilus HB8] gi|55772876|dbj|BAD71317.1| putative protease [Thermus thermophilus HB8] Length = 301 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 114/204 (55%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + + ++ + D+ A+++ + SPGG EA+ RA++ + KP++ + +AAS Sbjct: 63 ERFLSQVRQAREDEGVRAVVLYVESPGGGVTETEALHRALRALAQEKPLVASLGRVAASG 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++ A+ I+ T++ GSIGV+ P V L K+GV ++ +K +K SP + Sbjct: 123 GYYVATAAREILVPPTAVTGSIGVVGYLPQVGELLAKVGVRVEVLKEGRLKDMASPLRPL 182 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P+ +++Q ++ +Y FV+ V+E R +P +K L L+DGRI++G +A +GL D G Sbjct: 183 TPEEREVVQGLLREAYELFVQRVAEGRGMPREKVLALADGRIYSGKQAVALGLADREGYL 242 Query: 231 EEVWQSLYALGVDQSIRKIKDWNP 254 E+ + L ++ R ++ P Sbjct: 243 EDAARRAAELAGLKAFRLVRYTRP 266 >gi|323142045|ref|ZP_08076893.1| signal peptide peptidase SppA, 36K type [Phascolarctobacterium sp. YIT 12067] gi|322413432|gb|EFY04303.1| signal peptide peptidase SppA, 36K type [Phascolarctobacterium sp. YIT 12067] Length = 318 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 6/209 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMA 107 S ++++I + DDS AL++ + S GGSA A E + R ++ K K +KP++ + Sbjct: 67 SGSIMKQIREAAADDSVKALVLRIDSGGGSATAAEEVGRELKRFKEKTKKPIVATIGNTG 126 Query: 108 ASAGYLIS-CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 ASA Y I+ CAS+ + A T+L GSIGV Y + K+G++ +KS P K S Sbjct: 127 ASAAYWIAVCASDKVYANATTLTGSIGVYMPYMNTEELFKKIGITSNKIKSGPYKDIMSS 186 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P+ ++Q++V+ Y FV V+ R + K L+DGR++TG +AK +GL+D Sbjct: 187 DRPMTPEEQAILQNIVNEIYEQFVTTVAVGRKMEESKVKSLADGRVYTGLQAKNLGLVDE 246 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 +G + + +L A G I+ D PP Sbjct: 247 IG---DYYDALAAAGELGKIKPGADGLPP 272 >gi|46199432|ref|YP_005099.1| putative protease IV transmembrane protein [Thermus thermophilus HB27] gi|46197058|gb|AAS81472.1| putative protease IV transmembrane protein [Thermus thermophilus HB27] Length = 301 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 114/204 (55%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + + ++ + D+ A+++ + SPGG EA+ RA++ + KP++ + +AAS Sbjct: 63 ERFLSQVRQAREDEGVRAVVLYVESPGGGVTETEALHRALRALAQEKPLVASLGRVAASG 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++ A+ I+ T++ GSIGV+ P V L K+GV ++ +K +K SP + Sbjct: 123 GYYVATAAREILVPPTAVTGSIGVVGYLPQVGELLAKVGVRVEVLKEGRLKDMASPLRPL 182 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P+ +++Q ++ +Y FV+ V+E R +P +K L L+DGRI++G +A +GL D G Sbjct: 183 TPEEREVVQGLLREAYELFVQRVAEGRGMPREKVLALADGRIYSGKQAVALGLADREGYL 242 Query: 231 EEVWQSLYALGVDQSIRKIKDWNP 254 E+ + L ++ R ++ P Sbjct: 243 EDAARRAAELAGLKAFRLVRYTRP 266 >gi|326334330|ref|ZP_08200544.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693489|gb|EGD35414.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 607 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 103/184 (55%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++ +IE + D + A+I+ ++SPGGS A E I R I + KPV T + AAS Sbjct: 340 NETIIESLRDAREDKNIKAIILRINSPGGSGLASELIHREIALTQKVKPVYTSMGNWAAS 399 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+C SN I A + +L GSIGV P K DK+G+ + V++ P S + Sbjct: 400 GGYYIACNSNRIFADKETLTGSIGVFGLIPNAKELADKIGIHSQQVETHPHALTYSLLEK 459 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 K +++ + ++ Y FV+ V++ R + ++K L+ GR+WTGA+A K GLID +G Sbjct: 460 TPEKTREVITEGIERFYKKFVQRVADGRKMTWEKVDSLAQGRVWTGADALKHGLIDQIGS 519 Query: 230 QEEV 233 +V Sbjct: 520 LNDV 523 >gi|302390691|ref|YP_003826512.1| signal peptide peptidase A [Thermosediminibacter oceani DSM 16646] gi|302201319|gb|ADL08889.1| signal peptide peptidase A [Thermosediminibacter oceani DSM 16646] Length = 307 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S ++ ++ S+D S AL++ ++SPGGSA A + I++ + KVK K V+ + ++AA Sbjct: 64 SDHIVHQLHEASQDPSIKALVIRINSPGGSAAASQEIYQEVLKVKEAGKKVVVSMGDVAA 123 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ++ A++ IVA ++ GSIGV+ ++ V+ +KLG+ + +KS+ K SP Sbjct: 124 SGGYWVASAADKIVANPATITGSIGVIMEFQNVEGLFEKLGLKVNVIKSAEHKDIGSPTR 183 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + Q +VD Y+ F+ +V++ R + +K L+DGRI+TG +AK++GL+D +G Sbjct: 184 PMTEEERAIFQGMVDDIYNQFIDVVAKGRKMDREKVKELADGRIFTGRQAKELGLVDELG 243 >gi|260891981|ref|YP_003238078.1| signal peptide peptidase SppA, 36K type [Ammonifex degensii KC4] gi|260864122|gb|ACX51228.1| signal peptide peptidase SppA, 36K type [Ammonifex degensii KC4] Length = 296 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 110/185 (59%), Gaps = 1/185 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEV 103 G D + +IE + R D S A+++ + SPGGSA A + I A+++V K K V+ + Sbjct: 59 GSTADVRGVIEALGRAEEDPSIKAVVLRIDSPGGSAAASQEISDAVRRVQKAGKKVVVSM 118 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 + AAS Y ++ ++ IVA +++ GSIGV+F+ + KLG+ + +KS P K Sbjct: 119 GDTAASGAYWVAAGADKIVALPSTITGSIGVIFETANLSGLYHKLGIQKEILKSGPFKDM 178 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + P+ ++Q +VD Y FV V++ R++P K L L+DGR++TG +AK++GL Sbjct: 179 GSESRPLTPEERAILQGMVDDIYQQFVDHVAQGRHLPRQKVLELADGRVFTGRQAKELGL 238 Query: 224 IDVVG 228 +D +G Sbjct: 239 VDELG 243 >gi|268317676|ref|YP_003291395.1| signal peptide peptidase SppA, 67K type [Rhodothermus marinus DSM 4252] gi|262335210|gb|ACY49007.1| signal peptide peptidase SppA, 67K type [Rhodothermus marinus DSM 4252] Length = 604 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 111/186 (59%), Gaps = 1/186 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G++ S+ LI +E + + A+++ ++SPGGSA A EA+++AI++ KPVI + Sbjct: 333 GRMLGSETLIAALEEARQSERVKAVVLRINSPGGSAAASEAMWQAIRRTAEEKPVIVSMG 392 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP-FLDKLGVSIKSVKSSPMKAE 163 ++AAS GY IS A++ IVA ++ GSIGV+ F +K+G++ +++SP Sbjct: 393 DVAASGGYWISTAADTIVADPLTITGSIGVIGMLLNAGGLFENKIGITYDLLRTSPYADM 452 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S P V+ +Q + ++Y F++ VS++R +P D + GR+W G A ++GL Sbjct: 453 FSGLVPPEPYEVERLQQTIMATYRTFLQKVSQARGLPVDSVDAIGGGRVWIGETAHRIGL 512 Query: 224 IDVVGG 229 +DV+GG Sbjct: 513 VDVLGG 518 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 6/146 (4%) Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ A++ + A S G + K LDKL V + V++ K+ PF Sbjct: 139 ATYFLASAADSVFAGPESFFEFNGFYLTAEFYKRLLDKLEVEAQVVRAGAFKSAGEPFVR 198 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ + +Q ++D+ F+ V+E+R + D + ++ + + EA + GL+D Sbjct: 199 EHLSEENRLQLQALLDAYNRRFLETVAEARGLSVEDVNRLATEQLLLSAEEAVQAGLLDG 258 Query: 227 V--GGQ-EEVWQSLYALGVDQSIRKI 249 + GQ E + ++ G D+ +R++ Sbjct: 259 LRDAGQIERMLKTHLGYGPDEKLRRV 284 >gi|307566027|ref|ZP_07628485.1| signal peptide peptidase SppA, 67K type [Prevotella amnii CRIS 21A-A] gi|307345215|gb|EFN90594.1| signal peptide peptidase SppA, 67K type [Prevotella amnii CRIS 21A-A] Length = 592 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 RG + D+Q++ + + +I+ DD A+++ ++S GGSAYA E I+ I ++K +KPV+ + Sbjct: 326 RGSVIDAQKVCKDLAKIAADDDVKAVVIRVNSGGGSAYASEQIWHYIMELKKKKPVVVSM 385 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA 162 MAAS Y +S +N+IVA T+L GSIG+ +P L +KLGV V ++ A Sbjct: 386 GGMAASGAYYLSAPANLIVADPTTLTGSIGIFGMFPDFSGLLREKLGVKFDEVSTNKHAA 445 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + + ++++ V Y F V+E R + + + ++ G ++TG AK +G Sbjct: 446 FGTISRPFTIEEMRLLSQYVGRGYKLFCNRVAEGRKLSFQQINKIAQGHVYTGEYAKTIG 505 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 L+D +GG + A+ ++ KI+D+ Sbjct: 506 LVDYLGGLD------VAISKAANLAKIRDY 529 >gi|218442231|ref|YP_002380560.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7424] gi|218174959|gb|ACK73692.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7424] Length = 274 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 140/243 (57%), Gaps = 7/243 (2%) Query: 35 SPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +ARI I G I E +++++ ++++ + AL++ + SPGG+ + I++A+++ Sbjct: 10 SKQIARIEITGVIASETRKQVLKALDKVEQK-KYRALLLRIDSPGGTVGDSQEIYQALRR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + ++ ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+G+S Sbjct: 69 LHDKVKIVASFGNISASGGVYIGMGAQHIVANPGTITGSIGVIIRGNNLERLLDKIGISF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K VKS P K S E+ + ++Q+++D SY FV+ V++SRN+P + +DGRI Sbjct: 129 KVVKSGPYKDILSFDRELTSEEQGILQEMIDISYQQFVQTVAQSRNLPLETVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQ---SLYALGVDQS-IRKIKDWNPPKNYWFCDLKNLSI 268 +TG +A ++G+ID +G +E+ + L L D++ + I++ P N ++ + Sbjct: 189 FTGEQALELGVIDRLGTEEDARRWLAELVGLAPDKTKCQTIEEPKPLLNRILGGRRSQTK 248 Query: 269 SSL 271 SSL Sbjct: 249 SSL 251 >gi|146299478|ref|YP_001194069.1| signal peptide peptidase SppA, 67K type [Flavobacterium johnsoniae UW101] gi|146153896|gb|ABQ04750.1| signal peptide peptidase A, SppA, 67K type [Flavobacterium johnsoniae UW101] Length = 585 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 98/173 (56%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 ++ +++ A+++ + SPGGSA + I+R I+ K KPV+ + AAS GY I+C Sbjct: 332 LQEARKNEDVKAIVLRIDSPGGSALTSDLIWREIEITKKVKPVVVSMGNYAASGGYYIAC 391 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 ++ I A ++ GSIGV P P +KLG++ + VK+ A SPF V+ K Sbjct: 392 NADKIFAESNTITGSIGVFGVLPNFTPLANKLGINTEQVKTHENSANYSPFVPVDEKFKA 451 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + V+ Y FV V+E R + + + ++ GR+W+G EA K+GL+D +GG Sbjct: 452 FTLEGVEQIYKTFVTHVAEGRKMTFAQVDSIAQGRVWSGTEAVKIGLVDKIGG 504 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 10/131 (7%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF---- 167 Y ++ +N I + G+ + + K F +K G+ ++ ++ K+ PF Sbjct: 139 YYLNSVANTIYLNPAGDLDFKGLSSEVMFFKDFQEKSGIHMEVIRHGKYKSAVEPFLENK 198 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLID 225 S+ N + V + ++S + +S+SRNIP DK +++G + E AK L+D Sbjct: 199 MSDANREQVTAL---LNSIWSTVCSDISKSRNIPVDKLNEIANGLLARTPEMAKAQHLVD 255 Query: 226 VVGGQEEVWQS 236 +V E+V+ + Sbjct: 256 IV-AYEDVYHN 265 >gi|317154743|ref|YP_004122791.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] gi|316944994|gb|ADU64045.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] Length = 300 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 131/237 (55%), Gaps = 9/237 (3%) Query: 13 VMLSLVTLTVV-----YF---SWSSH-VEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 VM+ LV + +V +F W+ H V + +++ G I DS E++E I + D Sbjct: 20 VMMILVAVVLVMGATAFFRSMGWTPHSVGMGGDRLGMVSVEGVILDSAEVVEWIRTLKDD 79 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 S +++ ++SPGG+ + I++A+ + KPV+ +AAS GY S +++IVA Sbjct: 80 TSIKGVLLRVNSPGGAIAPSQEIYQAVSALAEVKPVVASYGTVAASGGYYASAPAHVIVA 139 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S+ SIGV+ ++ V L+KLG+ + + + KA +P E+ P+ + + D++ Sbjct: 140 NPGSITASIGVMAEFVTVTEALEKLGIKPEVLTTGKYKAAGTPMRELTPEQREQLLDLMR 199 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + FV V+ +R +P+ + ++DGR TG +A ++GL+D++G + + + L A+ Sbjct: 200 DLHDQFVGDVARARKMPFARVAAVADGRGVTGRQALELGLVDMLGSESQAFDKLKAM 256 >gi|327313455|ref|YP_004328892.1| signal peptide peptidase SppA, 67K type [Prevotella denticola F0289] gi|326946213|gb|AEA22098.1| signal peptide peptidase SppA, 67K type [Prevotella denticola F0289] Length = 592 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +Y+++ V+ + + +G D+Q + + +E + +D A+++ ++S GGSAYA Sbjct: 308 IYYAYGDIVDGAA---GGMFAQGHKIDAQTVCKDLEALGKDKDVKAVVLRINSGGGSAYA 364 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+ I K+K KPV+ + MAAS GY +S +N IVA T++ GSIG+ +P Sbjct: 365 SEQIWHQIMKLKKLKPVVVSMGGMAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPDAS 424 Query: 143 P-FLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 F +KLGV VK+ S + PF+E + + + VD Y F V+E R Sbjct: 425 GLFAEKLGVKFDEVKTNQHSDFGTQARPFTE---EEMAFLGQYVDRGYRLFRHRVAEGRR 481 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ ++ G ++TG +A+K+GL+D +GG Sbjct: 482 MTDEQIEKIAQGHVFTGQDARKIGLVDQLGG 512 >gi|325856625|ref|ZP_08172263.1| signal peptide peptidase SppA, 67K type [Prevotella denticola CRIS 18C-A] gi|325483339|gb|EGC86314.1| signal peptide peptidase SppA, 67K type [Prevotella denticola CRIS 18C-A] Length = 592 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 10/212 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +Y+++ V+ + + +G D+Q + + +E + +D A+++ ++S GGSAY Sbjct: 307 AIYYAYGDIVDGAA---GGMFAQGHKIDAQTVCKDLEALGKDKDVKAVVLRINSGGGSAY 363 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A E I+ I K+K KPV+ + MAAS GY +S +N IVA T++ GSIG+ +P Sbjct: 364 ASEQIWHQIMKLKKLKPVVVSMGGMAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPDA 423 Query: 142 KP-FLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 F +KLGV VK+ S + PF+E + + + VD Y F V+E R Sbjct: 424 SGLFAEKLGVKFDEVKTNRHSDFGTQARPFTE---EEMAFLGQYVDRGYRLFRHRVAEGR 480 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ ++ G ++TG +A+K+GL+D +GG Sbjct: 481 RMTDEQVEKIAQGHVFTGQDARKIGLVDQLGG 512 >gi|312131830|ref|YP_003999170.1| signal peptide peptidase sppa, 67k type [Leadbetterella byssophila DSM 17132] gi|311908376|gb|ADQ18817.1| signal peptide peptidase SppA, 67K type [Leadbetterella byssophila DSM 17132] Length = 581 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +S VA I G+I D ++E I+ I+R +D A+++ ++SPGGSA A + Sbjct: 297 SSDRVAVIVSEGEIVDGNGGEGFIAAEEFIKEIKRARKDKKVKAIVLRINSPGGSAMASD 356 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++R IQ K KPV + +AAS GY ++ + IVA T++ GSIG+ + F Sbjct: 357 KMWREIQLTKKEKPVFASMGNVAASGGYYMAMGCDTIVAHPTTITGSIGIFGVMLNFQKF 416 Query: 145 L-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + DKLGV+ V + PS ++ Q +Q++++ Y F ++ R + ++ Sbjct: 417 MNDKLGVTFDEVSTHTYSNSPSSVKKMTEVEKQSIQNMINKGYESFTTKAAQGRKMDLNE 476 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 L+ GR+WTG +AK+ GL+D++G Sbjct: 477 LKSLAGGRVWTGEQAKENGLVDILG 501 >gi|148553446|ref|YP_001261028.1| signal peptide peptidase SppA, 67K type [Sphingomonas wittichii RW1] gi|148498636|gb|ABQ66890.1| signal peptide peptidase SppA, 67K type [Sphingomonas wittichii RW1] Length = 626 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL+V + SPGGS E I AI + K PV+ + +AAS GY IS ++ I+A Sbjct: 352 ALVVRVDSPGGSVTGAETIRSAILQAKGLGLPVVVSMGGLAASGGYWISTPADRIIADPA 411 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P + L KLG+S VK++P+ EP F +P+ MMQ ++ Y Sbjct: 412 TITGSIGVFGILPTFQGSLAKLGLSADGVKTTPLSGEPDVFRGTSPQFDAMMQGSIEDVY 471 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F LV++SR +P ++ +++GR+W GA A+++GL+D G Sbjct: 472 RRFTGLVAQSRKLPIERVREIAEGRVWAGATARQIGLVDGFG 513 >gi|95929491|ref|ZP_01312234.1| signal peptide peptidase SppA, 36K type [Desulfuromonas acetoxidans DSM 684] gi|95134607|gb|EAT16263.1| signal peptide peptidase SppA, 36K type [Desulfuromonas acetoxidans DSM 684] Length = 298 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 4/258 (1%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 S V I + G I DS+ +++++ ++ + A+++ + SPGG + I+ + ++ Sbjct: 40 SDKVGVIEVLGTITDSKAIVDQLIDFGQNHAVKAIVLRVDSPGGGVGPSQEIYDEVVRLT 99 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV+ + +AAS GY IS +N I A ++ GSIGV+ ++ V +DK+G+ Sbjct: 100 ALKPVVVSMGSVAASGGYYISAPANRIFANSGTITGSIGVIMEFTNVIALMDKVGLKTNV 159 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS K S + + ++Q ++D + FV VSE R++ D+ L+DGRI+T Sbjct: 160 IKSGDHKDIGSSVRAMTDQEKALLQSLIDDVHDQFVTAVSEGRHLEKDQVFKLADGRIFT 219 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 G +A++ GL+D +GG + +++ G I D P DL + IS + Sbjct: 220 GRQAQQQGLVDDLGG---LQAAIHYAGELAGIEGTPDVLYPAEPK-PDLIDYFISRTASE 275 Query: 275 TIPLMKQTKVQGLWAVWN 292 ++ +T QGL +W+ Sbjct: 276 IERVILKTDTQGLQLLWS 293 >gi|296332070|ref|ZP_06874534.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675535|ref|YP_003867207.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150841|gb|EFG91726.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413779|gb|ADM38898.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii str. W23] Length = 335 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 113/203 (55%), Gaps = 4/203 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S ++DN + + G + + ++ +ER D + +++ ++SPGG Y I Sbjct: 66 SGTIQDNGDSSSLLGSDGY--NHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIH 123 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++K +KP+ + MAAS GY IS A++ I A +L GS+GV+ + Sbjct: 124 KKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLA 183 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DKLG+S +++KS K SP + + +MQ +VD+SY F+ ++SE R + + Sbjct: 184 DKLGISFETIKSGAHKDIMSPSRVMTKEEKNIMQSMVDNSYEGFIDVISEGRGMSKSEVK 243 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 ++DGR++ G +AKK+ L+D +G Sbjct: 244 KIADGRVYDGRQAKKLNLVDELG 266 >gi|166364670|ref|YP_001656943.1| protease [Microcystis aeruginosa NIES-843] gi|166087043|dbj|BAG01751.1| protease [Microcystis aeruginosa NIES-843] Length = 273 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I D+++ + + I ++ AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIASDTRKRVLKALEIVKERQYPALLLRIDSPGGTVGDSQEIYEALKRLQK 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +I ++AS G I +N I+A ++ GSIGV+ + ++ LDK+GVS K + Sbjct: 72 NTKIIASFGNISASGGVYIGMGANYIMANPGTITGSIGVILRGNNLERLLDKVGVSFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K S E+ + +++QD++D+SY F++ V+ +RN+ ++ +DGRI+TG Sbjct: 132 KSGPYKDILSFDRELTDEEERILQDMIDTSYQQFLQTVAGARNLDVNQVKSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEE 232 +A ++G++D +G +E+ Sbjct: 192 QQALELGVVDRLGTEED 208 >gi|159028319|emb|CAO87217.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 273 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I D+++ + + I ++ AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIASDTRKRVLKALEIVKERQYPALLLRIDSPGGTVGDSQEIYEALKRLQK 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +I ++AS G I +N I+A ++ GSIGV+ + ++ LDK+GVS K + Sbjct: 72 TTKIIASFGNISASGGVYIGMGANYIMANPGTITGSIGVILRGNNLERLLDKVGVSFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K S E+ + +++QD++D+SY F++ V+ +RN+ ++ +DGRI+TG Sbjct: 132 KSGPYKDILSFDRELTDEEERILQDMIDTSYQQFLQTVAGARNLDVNQVKSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEE 232 +A ++G++D +G +E+ Sbjct: 192 QQALELGVVDRLGTEED 208 >gi|320101772|ref|YP_004177363.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] gi|319749054|gb|ADV60814.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] Length = 379 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 3/207 (1%) Query: 37 HVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ-KV 93 +A I I G I+DS+ + +I + S D S +++ + SPGG+ A + ++R +Q ++ Sbjct: 95 KLAIIEITGSIDDSKADGISRQITQASLDSSVKGVLLRIDSPGGTVSASDRLWRDVQTRL 154 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 RKPV+ + AAS GY I+CA + + A ++ GSIGV+ + P + LDK+GV Sbjct: 155 VGRKPVVVSMGSRAASGGYYIACAGDALFAEPATITGSIGVILEIPQISGLLDKIGVEFA 214 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ + K S + + + Q +D SY F+R+V++ R + + L+DG I+ Sbjct: 215 TLTTGKFKDSGSIYRPITNEERQRFLKSIDQSYQRFLRVVAQGRKMELSQLKPLADGSIF 274 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +G EA + GL+D +G Q++ + L L Sbjct: 275 SGEEALENGLVDFLGYQDDALRHLLKL 301 >gi|157693342|ref|YP_001487804.1| peptidase [Bacillus pumilus SAFR-032] gi|157682100|gb|ABV63244.1| S49 family unassigned peptidase [Bacillus pumilus SAFR-032] Length = 333 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 132/250 (52%), Gaps = 5/250 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 ++DN A + G+ D + ++ +E+ D S +++ ++SPGG Y I + + Sbjct: 68 IQDNGG--ASSLLGGEGYDHRAFLKELEKAKDDASVKGVLLRVNSPGGGVYESAEIHKKL 125 Query: 91 QKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++VK +KP+ + MAAS GY +S + I A+ +L GS+GV+ Q D LG Sbjct: 126 EEVKKAKKPIYVSMGSMAASGGYYVSTPAKKIFASPETLTGSLGVIMQSLNYSKLADNLG 185 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + +++KS K SP ++ +MQ +VD+SY FV+++SE R + ++D Sbjct: 186 IKYETIKSGKFKDIMSPNRDMTKDERDIMQSMVDNSYEGFVKVISEGRGMSKQDVKKIAD 245 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR++ G +AK GL+D +G E+ +++ ++ ++ + +++ + L N+S S Sbjct: 246 GRVYDGTQAKSNGLVDELGYYEDAIKAMKK--NEKGLKGATVISYSQSFGWNSLFNMSAS 303 Query: 270 SLLEDTIPLM 279 L + I + Sbjct: 304 KLFKSEIDFL 313 >gi|312882482|ref|ZP_07742223.1| protease IV [Vibrio caribbenthicus ATCC BAA-2122] gi|309369882|gb|EFP97393.1| protease IV [Vibrio caribbenthicus ATCC BAA-2122] Length = 616 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 132/246 (53%), Gaps = 24/246 (9%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE--------LIERIERISRDDSAT-ALIVSLSSP 76 S + ++ N+ +A + G I D + + + R +R+D A+++ + SP Sbjct: 315 SMAPKLQYNNDDIAVVVASGAIMDGSQPRGTVGGDTVAALLRQARNDKKVKAVVLRVDSP 374 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I +Q +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 375 GGSAFASEVIRNEVQALKAEGKPVVVSMSSLAASGGYWISMSADSIVAQPTTLTGSIGIF 434 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + L+KLG+ V +SP + SE +A+QM +D Y F+ LV Sbjct: 435 SIITTFEKGLNKLGIYTDGVGTSPFSGVGLTTGLSEGASQALQMG---IDHGYQRFISLV 491 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 S+SR +P DK +++GR+WTG +A K+GL+D +G ++ A+ + + K++ +N Sbjct: 492 SQSRQLPIDKMEGIAEGRVWTGEDALKLGLVDKIGDFDD------AVALAAQLAKLEKYN 545 Query: 254 PPKNYW 259 YW Sbjct: 546 L---YW 548 >gi|299535443|ref|ZP_07048765.1| putative signal peptide peptidase sppA [Lysinibacillus fusiformis ZC1] gi|298729204|gb|EFI69757.1| putative signal peptide peptidase sppA [Lysinibacillus fusiformis ZC1] Length = 337 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 D Q +E+++ I D+S +++S++SPGG I++ + K+K + P+ + M Sbjct: 86 DHQFFLEQLDNILYDESIQGVVLSVNSPGGGVKESADIYKKLLKIKEERQIPIYVSMDSM 145 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A ++ GSIGV+ Q + +K+GV ++ KS K SP Sbjct: 146 AASGGYYISAPADKIFAHRDTITGSIGVIMQSINYQELAEKVGVKFETFKSGEHKDMLSP 205 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 EV + MMQD+++ +Y FV +V + RN+ + ++DGRI G +A + GLID Sbjct: 206 MREVTAEERAMMQDMINETYEEFVDIVEQGRNMSEAEVKKVADGRILGGTKALEAGLIDE 265 Query: 227 VGGQEEVWQSL 237 +G +E +L Sbjct: 266 IGDEEAAIAAL 276 >gi|194017284|ref|ZP_03055896.1| signal peptidase SppA [Bacillus pumilus ATCC 7061] gi|194011152|gb|EDW20722.1| signal peptidase SppA [Bacillus pumilus ATCC 7061] Length = 333 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 132/250 (52%), Gaps = 5/250 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 ++DN A + G+ D + ++ +E+ D S +++ ++SPGG Y I + + Sbjct: 68 IQDNGG--ASSLLGGEGYDHRAFLKELEKAKDDASVKGVLLRVNSPGGGVYESAEIHKKL 125 Query: 91 QKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++VK +KP+ + MAAS GY +S + I A+ +L GS+GV+ Q D LG Sbjct: 126 EEVKKAKKPIYVSMGSMAASGGYYVSTPAKKIFASPETLTGSLGVIMQSLNYSKLADNLG 185 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + +++KS K SP ++ +MQ +VD+SY FV+++SE R + ++D Sbjct: 186 IKYETIKSGKFKDIMSPNRDMTKDERDIMQSMVDNSYEGFVKVISEGRGMSKQDVKKIAD 245 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR++ G +AK GL+D +G E+ +++ ++ ++ + +++ + L N+S S Sbjct: 246 GRVYDGTQAKSNGLVDELGYYEDAIKAMKK--NEKGLKGATVVSYSQSFGWNSLFNMSAS 303 Query: 270 SLLEDTIPLM 279 L + I + Sbjct: 304 KLFKSEIDFL 313 >gi|269925543|ref|YP_003322166.1| signal peptide peptidase SppA, 36K type [Thermobaculum terrenum ATCC BAA-798] gi|269789203|gb|ACZ41344.1| signal peptide peptidase SppA, 36K type [Thermobaculum terrenum ATCC BAA-798] Length = 339 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 13/211 (6%) Query: 38 VARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A I + G I++S + L +++ D A+I+ + SPGG A + + Sbjct: 70 IAIIPVTGTIQESAGGFTTSAATPESLKAMLDQAENDSKVKAIILEVDSPGGEVVASDEM 129 Query: 87 FRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +R I K + RKPV+ + AAS Y IS A++ IVA +L GS+GV+ +Y Sbjct: 130 YREILDFKQRTRKPVVVRMVSTAASGAYYISMAADKIVANPMTLTGSLGVIMEYMNFSKA 189 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 DK+G+S ++S K +PF + + Q++Q +VD +Y+ FV ++++ R +P + Sbjct: 190 ADKVGISQVVIRSGEFKDIGNPFRDPTKEERQILQQLVDEAYNQFVNVIAQGRKMPTSRV 249 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 L+DGR+++G +AK++GL+D +G ++ Q Sbjct: 250 RQLADGRVYSGQQAKQLGLVDELGNLDKAVQ 280 >gi|56476731|ref|YP_158320.1| protease IV [Aromatoleum aromaticum EbN1] gi|56312774|emb|CAI07419.1| Protease IV [Aromatoleum aromaticum EbN1] Length = 613 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 10/205 (4%) Query: 37 HVARIAIRGQIEDSQEL--------IERIERISRDDS-ATALIVSLSSPGGSAYAGEAIF 87 HVA + +G I D + + + R++R+D AL++ + SPGGSA+A E I Sbjct: 322 HVAVLVAQGAIIDGSDTQSAVGGDSLAHLIRMAREDERVKALVLRVDSPGGSAWASEVIR 381 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R ++ + KPV+ + +AAS GY I+ + I A+ SL GSIG+ +P + LD Sbjct: 382 RELELTREAGKPVVASMSSVAASGGYWIATGAEEIFASPASLTGSIGIFALFPELAGALD 441 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV+ V + P+ P + P A + +Q ++ Y F+ V+++R++ + Sbjct: 442 KLGVNTDGVATGPLAGAFDPRRPLEPAAAKTIQLGIEHGYRRFLETVAKARDMSATEVDT 501 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ GR+WTG A K+GL+D +GG E Sbjct: 502 VARGRVWTGEAATKLGLVDQLGGLE 526 >gi|45358632|ref|NP_988189.1| basic helix-loop-helix dimerization domain-containing protein [Methanococcus maripaludis S2] gi|45047498|emb|CAF30625.1| Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Methanococcus maripaludis S2] Length = 308 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 140/244 (57%), Gaps = 16/244 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI----EDS----------QELIERI 57 +++++++ + ++ F S + +S ++A I I G I DS + +E + Sbjct: 12 FLIIAILMVGLLVFVSSDGI--SSKNIALINIDGTITLESSDSGLFSSIQPGVNDYVEWL 69 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + +D+ A+I+ ++SPGG A A E + R I++V +KPV+ + M ASA Y + + Sbjct: 70 DDAENNDNIKAVIIKINSPGGGAVASEKLSRKIKEVSEKKPVVAYIENMGASAAYQAASS 129 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 +N IVA ++VGSIGV + + ++KLG++ S+ K +P + + M Sbjct: 130 TNYIVAERQAVVGSIGVRMELIHYYGLMEKLGINTTSITGGKYKDIGTPTRSMTEEEYAM 189 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ +V+ SY+ FV V+E+RN+ ++TL ++DG+I++G +A++VGL+D+ G +++ Sbjct: 190 LESMVNESYYEFVSWVAENRNMTINETLEVADGKIYSGTQAQRVGLVDITGTEDDAVDMA 249 Query: 238 YALG 241 LG Sbjct: 250 VKLG 253 >gi|313157546|gb|EFR56964.1| signal peptide peptidase SppA, 67K type [Alistipes sp. HGB5] Length = 619 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 10/196 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L + + D+ A+++ ++SPGGSA A + I+R ++ +K KPV+ + AAS GY Sbjct: 363 LAATLAGVRDDEKVKAVVLRVNSPGGSALASDVIWREMELLKAEKPVVVSMGSYAASGGY 422 Query: 113 LISCASNIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSE 169 ISC +++IVA + +L GSIGV Y + F +KLG++ +VKS S SP + Sbjct: 423 YISCPADVIVADKLTLTGSIGVFGMYLNTIDAFKNKLGITFDAVKSNTSAGMGATSPLTA 482 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ VD Y F V+E RN+P +K L ++ GR+W+G +A +GLID GG Sbjct: 483 AERASIMRG---VDKVYTTFTTHVAEGRNLPVEKVLDIAGGRVWSGEDALGIGLIDTYGG 539 Query: 230 QEEVWQSLYALGVDQS 245 ++ A+ VD++ Sbjct: 540 ----LKTAIAIAVDKA 551 >gi|255012266|ref|ZP_05284392.1| protease IV [Bacteroides sp. 2_1_7] Length = 588 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 34 NSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGGSA Sbjct: 301 NAPEIAVLYAEGEIKAQTPGSLYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGGSA 360 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ +P Sbjct: 361 YISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMFPN 420 Query: 141 VKPFLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 KL ++ VK+ S + P +E + KA ++Q V+ Y F+ +E R Sbjct: 421 ASGLFGKLALTTDIVKTNTFSDLGDLSRPMTE-SEKA--LIQGYVERGYQTFLSRCAEGR 477 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + GR+WTG +AK+ GL+D +GG E Sbjct: 478 GMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIE 511 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 30/214 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------- 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 22 ILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLSL 81 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 82 KDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQG 141 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 142 NYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFMLD 201 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 SE N + + Q + + + ++ESR I Sbjct: 202 KLSEANREQI---QSYISTIWDNITEGIAESRGI 232 >gi|158333242|ref|YP_001514414.1| signal peptide peptidase SppA [Acaryochloris marina MBIC11017] gi|158303483|gb|ABW25100.1| signal peptide peptidase SppA, 36K type [Acaryochloris marina MBIC11017] Length = 273 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 126/227 (55%), Gaps = 6/227 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +AR+ I+G I + + ++E ++ I + L++ + SPGG+ I+ A+ K++ Sbjct: 11 QIARLEIKGAIAGATRKHVLEALKTIE-EKGYPVLLLRIDSPGGTVVDSHEIYSALIKLR 69 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 70 EKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKVGVSFKV 129 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K + E+ Q++QD++DSSY FV +V+E RN+ D +DGR++T Sbjct: 130 IKSGPYKDILAFDRELTEPERQILQDLIDSSYSQFVEIVAEGRNLEVDAVKQFADGRVFT 189 Query: 215 GAEAKKVGLIDVVGGQEE--VWQSLYALGVDQSIRKIKDWNPPKNYW 259 G +A ++GL+D +G +E+ W + A G+D K K++W Sbjct: 190 GQQALELGLVDRLGTEEDARCWAAELA-GLDPEKAKCNTIEEHKSFW 235 >gi|150010501|ref|YP_001305244.1| protease IV [Parabacteroides distasonis ATCC 8503] gi|149938925|gb|ABR45622.1| protease IV [Parabacteroides distasonis ATCC 8503] Length = 588 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 34 NSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGGSA Sbjct: 301 NAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGGSA 360 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ +P Sbjct: 361 YISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMFPN 420 Query: 141 VKPFLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 KL ++ VK+ S + P +E + KA ++Q V+ Y F+ +E R Sbjct: 421 ASGLFGKLALTTDIVKTNTFSDLGDLSRPMTE-SEKA--LIQGYVERGYQTFLSRCAEGR 477 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + GR+WTG +AK+ GL+D +GG E Sbjct: 478 GMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIE 511 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 30/214 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------- 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 22 ILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLSL 81 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 82 KDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQG 141 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 142 NYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFMLD 201 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 SE N + + Q + + + ++ESR I Sbjct: 202 KLSEANREQI---QSYISTIWDNIAEGIAESRGI 232 >gi|301311313|ref|ZP_07217240.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 20_3] gi|300830399|gb|EFK61042.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 20_3] Length = 588 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 34 NSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGGSA Sbjct: 301 NAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGGSA 360 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ +P Sbjct: 361 YISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMFPN 420 Query: 141 VKPFLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 KL ++ VK+ S + P +E + KA ++Q V+ Y F+ +E R Sbjct: 421 ASGLFGKLALTTDIVKTNTFSDLGDLSRPMTE-SEKA--LIQGYVERGYQTFLSRCAEGR 477 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + GR+WTG +AK+ GL+D +GG E Sbjct: 478 GMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIE 511 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 30/214 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------- 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 22 ILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLSL 81 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 82 KDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQG 141 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 142 NYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFILD 201 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 SE N + +Q + + + ++ESR I Sbjct: 202 KLSEANR---EQIQSYISTIWDNIAEGIAESRGI 232 >gi|256839290|ref|ZP_05544800.1| signal peptide peptidase SppA, 67K type [Parabacteroides sp. D13] gi|256740209|gb|EEU53533.1| signal peptide peptidase SppA, 67K type [Parabacteroides sp. D13] Length = 582 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 34 NSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGGSA Sbjct: 295 NAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGGSA 354 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ +P Sbjct: 355 YISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMFPN 414 Query: 141 VKPFLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 KL ++ VK+ S + P +E + KA ++Q V+ Y F+ +E R Sbjct: 415 ASGLFGKLALTTDIVKTNTFSDLGDLSRPMTE-SEKA--LIQGYVERGYQTFLSRCAEGR 471 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + GR+WTG +AK+ GL+D +GG E Sbjct: 472 GMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIE 505 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 30/214 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------- 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 16 ILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLSL 75 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 76 KDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQG 135 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 136 NYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFMLD 195 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 SE N + +Q + + + ++ESR I Sbjct: 196 KLSEANR---EQIQSYISTIWDNITEGIAESRGI 226 >gi|22299347|ref|NP_682594.1| protease [Thermosynechococcus elongatus BP-1] gi|22295530|dbj|BAC09356.1| protease [Thermosynechococcus elongatus BP-1] Length = 274 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 131/224 (58%), Gaps = 4/224 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +AR+ I G I S + +++ ++ I + AL+V + SPGG+ + I+ A+++++ Sbjct: 12 QIARLEITGAIAGSTRRRVLKALKTIE-ERGYPALLVRIDSPGGTVGDSQEIYAALKRLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 ++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 SKMKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLQRLLDKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K + ++ + ++++QD++D+SY FV+ V+E RN+ + +DGR++T Sbjct: 131 IKSGPYKDILAFDRDLTEEEIRILQDLIDTSYQQFVQTVAEGRNLDVETVRSFADGRVFT 190 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKN 257 G +A +GL+D +G +E+ + L L G+D K++ PK+ Sbjct: 191 GEQALALGLVDRLGTEEDARRWLAELAGLDPDKTKVQTIEEPKS 234 >gi|298374871|ref|ZP_06984829.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_19] gi|298269239|gb|EFI10894.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_19] Length = 582 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%) Query: 34 NSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGGSA Sbjct: 295 NAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGGSA 354 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ +P Sbjct: 355 YISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMFPN 414 Query: 141 VKPFLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 KL ++ VK+ S + P +E + KA ++Q V+ Y F+ +E R Sbjct: 415 ASGLFGKLALTTDIVKTNTFSDLGDLSRPMTE-SEKA--LIQGYVERGYQTFLSRCAEGR 471 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + GR+WTG +AK+ GL+D +GG E Sbjct: 472 GMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIE 505 >gi|222151629|ref|YP_002560785.1| hypothetical protein MCCL_1382 [Macrococcus caseolyticus JCSC5402] gi|222120754|dbj|BAH18089.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 333 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 116/219 (52%), Gaps = 14/219 (6%) Query: 33 DNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGS 79 D + +ARI I G I D+ Q +++ ++ + + AL++ ++SPGG Sbjct: 53 DATNQIARIEIDGTIMDTGTPSPFSGESYNHQLILDSLDEVKDNGDIKALMLVVNSPGGG 112 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I I+ VK K V + AAS GY IS ++ I A++ +L GS+GV+ Q Sbjct: 113 VYESAEIHDKIEAVKEAGKKVYVTMKNTAASGGYYISAPADKIYASKETLTGSLGVIMQS 172 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 K DK GV ++KS P K SP E++ ++Q VD SY FV ++S R+ Sbjct: 173 MNYKELADKYGVKFNTIKSGPHKDIMSPTKEMDETERAILQKFVDESYEGFVNVISNGRH 232 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + ++DGRI++G +A+K+ L+D +G + + ++L Sbjct: 233 MDKAQVKKIADGRIYSGQQAQKLDLVDEIGTEADAMKAL 271 >gi|262382242|ref|ZP_06075379.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_33B] gi|262295120|gb|EEY83051.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_33B] Length = 582 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 115/215 (53%), Gaps = 21/215 (9%) Query: 34 NSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGGSA Sbjct: 295 NAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGGSA 354 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ +P Sbjct: 355 YISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMFPN 414 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ----MMQDVVDSSYHWFVRLVSES 196 KL ++ VK++ S F +++ + ++Q V+ Y F+ +E Sbjct: 415 ASGLFGKLALTTDIVKTNTF----SDFGDLSRPMTESEKALIQGYVERGYQTFLSRCAEG 470 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 R + + + GR+WTG +AK+ GL+D +GG E Sbjct: 471 RGMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIE 505 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 30/214 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------- 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 16 ILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLSL 75 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 76 KDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQG 135 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 136 NYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFMLD 195 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 SE N + +Q + + + ++ESR I Sbjct: 196 KLSEANR---EQIQSYISTIWDNIAEGIAESRGI 226 >gi|150401144|ref|YP_001324910.1| signal peptide peptidase SppA, 36K type [Methanococcus aeolicus Nankai-3] gi|150013847|gb|ABR56298.1| signal peptide peptidase SppA, 36K type [Methanococcus aeolicus Nankai-3] Length = 290 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 110/183 (60%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + E I ++ +D A+++ ++SPGG A E + R +++V +KPV+ + + AS Sbjct: 48 ADEYIRLLDNAENNDGVKAVVLKINSPGGEVVASEKLARKVKEVSEKKPVVAYIETIGAS 107 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y+ + S+ IVA + S+VGSIGV+ + +K+G++ ++K+ K SP Sbjct: 108 GAYMAAVPSDYIVAEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKDIGSPNRP 167 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +M++ + D Y F++ V+E+R + +KT +++G+I+TG++AKK GL+D VG Sbjct: 168 MTDEEKKMLESMTDEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGV 227 Query: 230 QEE 232 +++ Sbjct: 228 EQD 230 >gi|295706883|ref|YP_003599958.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium DSM 319] gi|294804542|gb|ADF41608.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium DSM 319] Length = 336 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 117/212 (55%), Gaps = 5/212 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEM 106 + Q ++++E D + +I+ ++SPGG I + I+++K +KPV + M Sbjct: 87 NHQAFLKQLEAAKNDKAVKGVIIKVNSPGGGVVESAEIHKKIEELKKDTKKPVYISMGSM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS A+N I A +L GS+GV+ Q DKLGV +KS K SP Sbjct: 147 AASGGYYISTAANKIYAIPDTLTGSLGVIMQSVNYGKLADKLGVESVVIKSGAHKDIMSP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E+ + ++MQ +VD+SY FV ++SE R++ +K ++DGR++ G +AK++ L+D Sbjct: 207 TREMTGEEKEIMQTLVDNSYDGFVNVISEGRHLSKEKVRSIADGRVYDGRQAKELKLVDQ 266 Query: 227 VGGQEEVWQSL---YALGVDQSIRKIKDWNPP 255 +G E+ + + Y L Q I+ + + P Sbjct: 267 LGYFEDAVKGMEKDYKLKGAQVIQYNQGFGLP 298 >gi|300776240|ref|ZP_07086098.1| signal peptide peptidase SppA [Chryseobacterium gleum ATCC 35910] gi|300501750|gb|EFK32890.1| signal peptide peptidase SppA [Chryseobacterium gleum ATCC 35910] Length = 585 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 102/179 (56%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++ ++ I+++ DD A++ ++SPGGSA A + I +Q++K +KP+I + AAS Sbjct: 324 SEKYVKYIKKLQEDDKVKAVVFRINSPGGSANASDEILFELQQLKKKKPLIVSFGDYAAS 383 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A++ I + +L GSIGV PY K K G+ V ++ S + Sbjct: 384 GGYYVAMAADKIYSEPNTLTGSIGVFGVMPYYKDIAAKNGIRADIVATNANSMYYSGLNG 443 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V P V MM V+ +Y FV V+++R +++ + GR+W+G AK++GL+D +G Sbjct: 444 VTPYGVNMMTRSVEGTYKRFVHFVTQNRKKTFEQIDNVGGGRVWSGVRAKEIGLVDELG 502 >gi|228470849|ref|ZP_04055696.1| signal peptide peptidase SppA, 67K type [Porphyromonas uenonis 60-3] gi|228307416|gb|EEK16426.1| signal peptide peptidase SppA, 67K type [Porphyromonas uenonis 60-3] Length = 594 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 107/186 (57%), Gaps = 6/186 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +L +RI + DD AL+V ++SPGGS+Y E ++ A+ K KPV+ + + AAS Sbjct: 336 TDQLADRILEMGEDDDYDALVVRVNSPGGSSYISEQLWYAVHKASQNKPVVISMGDYAAS 395 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSP 166 GY +S ++ I A +++ GSIG+ P +K+GV +K+ + + + A P Sbjct: 396 GGYYMSSGASYIFAEPSTITGSIGIFGVVPNATKLANKIGVHQDVVKTARYADLGALDRP 455 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++E + + Q V+ Y F++ VSE R + D+ ++ GR+WTGA+A +GL+D Sbjct: 456 WTE---EERGLFQQYVNRGYELFLKRVSEGRGMTRDQVDSIAQGRVWTGAQALGLGLVDE 512 Query: 227 VGGQEE 232 +GG ++ Sbjct: 513 LGGLQD 518 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +IE I+ DD + +++ PG + EA+ A++ K I + + GY Sbjct: 89 VIEAIDEAKNDDRIKGIYLNMMDPGCGFASAEALRGALEDFKQTGKFIVSYSDFYSLKGY 148 Query: 113 -LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 L S A + V E S+ G+ + K LDK+GV + K K+ P+ Sbjct: 149 YLASVADQLYVNKEGSIAFD-GLAGGAVFFKDLLDKIGVEMMVFKVGTFKSAVEPY 203 >gi|294501535|ref|YP_003565235.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium QM B1551] gi|294351472|gb|ADE71801.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium QM B1551] Length = 336 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEM 106 + Q ++++E D + +I+ ++SPGG I + I+++K +KPV + M Sbjct: 87 NHQAFLKQLEAAKNDKAVKGVIIKVNSPGGGVVESAEIHKKIEELKKETKKPVYISMGSM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS A+N I A +L GS+GV+ Q DKLGV +KS K SP Sbjct: 147 AASGGYYISTAANKIYAIPDTLTGSLGVIMQSVNYGKLADKLGVESVVIKSGAHKDIMSP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E+ + ++MQ +VD+SY FV ++SE R++ +K ++DGR++ G +AK++ L+D Sbjct: 207 TREMTGEEKEIMQTLVDNSYDGFVNVISEGRHLSKEKVRSIADGRVYDGRQAKELKLVDQ 266 Query: 227 VG 228 +G Sbjct: 267 LG 268 >gi|315641101|ref|ZP_07896180.1| U7 family peptidase [Enterococcus italicus DSM 15952] gi|315483109|gb|EFU73626.1| U7 family peptidase [Enterococcus italicus DSM 15952] Length = 343 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 116/220 (52%), Gaps = 15/220 (6%) Query: 33 DNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGG 78 D+ + ++ + G I D+ Q+L+ ++ I DDS +++ ++SPGG Sbjct: 58 DSDKRIVQLTVDGTISDTGESTSLFSSEGYNHQQLLSELKAIQEDDSIKGVLLVVNSPGG 117 Query: 79 SAYAGEAIFRAIQKVKNRKPVI-TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y I + I KV+ + ++ + MAAS GY IS +++ I A ++ GSIGV+ Sbjct: 118 GVYESAEIAKEIAKVQQKGKILYVSMKSMAASGGYYISASADKIFATNETITGSIGVIAS 177 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 L+KLGV+ ++ KS +K S + +MQ +DS+Y FV +V+ R Sbjct: 178 NLNYSGLLEKLGVTDQTYKSGALKDMNSSVRPATDEDKAVMQAYIDSAYGRFVDVVANGR 237 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 N+ D L+DGRI+ G++A K GL+D +G Q++ +L Sbjct: 238 NLSVDAVKTLADGRIYDGSQAVKNGLVDEIGYQDDTLAAL 277 >gi|103487702|ref|YP_617263.1| signal peptide peptidase SppA, 67K type [Sphingopyxis alaskensis RB2256] gi|98977779|gb|ABF53930.1| signal peptide peptidase SppA, 67K type [Sphingopyxis alaskensis RB2256] Length = 661 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 101/181 (55%), Gaps = 1/181 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 + E I + D S A+++ + SPGGS A E I +A+ K RK PV+ + +AAS G Sbjct: 370 IAEHILDAATDSSVKAIVLRVDSPGGSVLASEEIRQALLAAKARKLPVVVSMANVAASGG 429 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I A ++ GSIGV P L K+GV+ + ++P+ +P F VN Sbjct: 430 YWISTPADRIFAEPETITGSIGVFGILPSFDRALAKIGVNADGIATTPLSGQPDIFGGVN 489 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + Q V+ Y F LV++SR P DK L +++GR+W G A+++GL+D GG Sbjct: 490 EEFNALAQASVEDVYTRFTGLVAKSRKQPLDKILPIAEGRVWAGGTARQLGLVDQFGGLP 549 Query: 232 E 232 E Sbjct: 550 E 550 >gi|163791443|ref|ZP_02185852.1| hypothetical protein CAT7_03184 [Carnobacterium sp. AT7] gi|159873307|gb|EDP67402.1| hypothetical protein CAT7_03184 [Carnobacterium sp. AT7] Length = 345 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 110/191 (57%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEM 106 D ++++E+I DD+ +I+S++SPGG Y I + ++ K +KP+ + M Sbjct: 90 DHNGFLQQLEQILVDDTIKGIILSVNSPGGGTYESAQIKDKLVEIQEKTKKPIYVSMGSM 149 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS + I AAE +L GSIGV+ + +K+G+ ++KS K S Sbjct: 150 AASGGYYISAPAEKIFAAEETLTGSIGVIMSGTNLTELFEKIGIDDTTIKSGKFKDIGST 209 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E+ + ++Q +V++S+ FV ++ + R + D ++DGRI+ GA+A ++GL+D Sbjct: 210 TREMTEEDAAILQTMVNTSFDRFVDVIVKGRGMDEDVVRTIADGRIYDGAQAVELGLVDE 269 Query: 227 VGGQEEVWQSL 237 +G QE+ +++ Sbjct: 270 IGYQEDALETI 280 >gi|282860141|ref|ZP_06269217.1| signal peptide peptidase SppA, 67K type [Prevotella bivia JCVIHMP010] gi|282587128|gb|EFB92357.1| signal peptide peptidase SppA, 67K type [Prevotella bivia JCVIHMP010] Length = 592 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 +G++ D+Q++ + + +++ ++S A+++ ++S GGSAYA E I+ I ++K +KPV+ + Sbjct: 326 QGEVIDAQKVCKDLAKLAEEESVKAVVLRINSGGGSAYASEQIWHQIMELKKQKPVVVSM 385 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA 162 +AAS Y S +N IVA T+L GSIG+ +P L +KLGV V ++ A Sbjct: 386 GGLAASGAYYSSAPANWIVANPTTLTGSIGIFGMFPDTSGLLTEKLGVKFDEVATNKYAA 445 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 SP N ++++ +D Y F V+E R + + L+ G ++TG AK +G Sbjct: 446 FGSPARPFNADELRILGQYIDRGYALFRHRVAEGRKMTEQQVEQLAQGHVYTGEYAKTIG 505 Query: 223 LIDVVGG 229 L+D +GG Sbjct: 506 LVDELGG 512 >gi|126656085|ref|ZP_01727469.1| Peptidase S49, SppA [Cyanothece sp. CCY0110] gi|126622365|gb|EAZ93071.1| Peptidase S49, SppA [Cyanothece sp. CCY0110] Length = 272 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 141/261 (54%), Gaps = 9/261 (3%) Query: 35 SPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +ARI I G I E + ++E ++ + ++ AL++ + SPGG+ + I+ A+++ Sbjct: 10 SKQIARIEITGAIASETRKYVLEALKTV-KEKKFPALLLRIDSPGGTVGDSQEIYEALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LQEKVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLERLLDKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K + E+ + ++Q+++D+SY FV V+E RN+ D +DGRI Sbjct: 129 KVIKSGPYKDILAFDRELTEEEQHILQEMIDTSYQQFVTTVAEGRNLDVDNVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEV--WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +TG +A ++G++D +G +E+ W + A G++ + D PK+ L S Sbjct: 189 FTGQQALELGVVDRLGTEEDARRWAAELA-GLNPDKAQCYDIEEPKSLLNRVLSRNQTKS 247 Query: 271 LLEDTIPLMK---QTKVQGLW 288 L +I ++ +T Q LW Sbjct: 248 KLRTSIDWLEFELKTNGQPLW 268 >gi|298505345|gb|ADI84068.1| peptidase, S49 family [Geobacter sulfurreducens KN400] Length = 293 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 113/186 (60%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 ++G I DSQE +++++ + + S A+++ + SPGG + I+ A++++ K V+ Sbjct: 48 VKGPIIDSQETVKQLDDLRKKSSVKAVVLRVESPGGVIGPSQEIYAAVKRLAATKKVVVS 107 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + +AAS GY ++ + +I A ++ GSIGVL + ++ +DK+G+ ++KS K Sbjct: 108 MGSVAASGGYHVAVPAAVIYANPGTITGSIGVLMKLSNIEGLMDKVGLKAFTLKSGKFKD 167 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 SP ++ + ++Q V+D+ + FVR V+E R +P ++ L+DGR++TG +A ++ Sbjct: 168 SGSPVRKLTEEERAVLQGVIDNLHDQFVRAVAEGRQLPVEEVRRLADGRVYTGEQALRLK 227 Query: 223 LIDVVG 228 L+D +G Sbjct: 228 LVDRLG 233 >gi|313886500|ref|ZP_07820216.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica PR426713P-I] gi|312924046|gb|EFR34839.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica PR426713P-I] Length = 594 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 107/186 (57%), Gaps = 6/186 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S L +RI + DD AL+V ++SPGGS+Y E ++ A+ K KPV+ + + AAS Sbjct: 336 SDRLADRILEMGEDDDYDALVVRVNSPGGSSYISEQLWYAVHKASENKPVVISMGDYAAS 395 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSP 166 GY +S ++ I A +++ GSIG+ P +K+GV +K+ + + + A P Sbjct: 396 GGYYMSSGASYIFAEPSTITGSIGIFGVVPNATKLANKIGVHQDVVKTAQHADLGALDRP 455 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++E + + Q V+ Y F++ VSE RN+ + ++ GR+WTGA+A ++GL+D Sbjct: 456 WTE---EERALFQQYVNRGYALFLKRVSEGRNMTTAQVDSIAQGRVWTGAQALELGLVDE 512 Query: 227 VGGQEE 232 +GG ++ Sbjct: 513 LGGLQD 518 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 22/201 (10%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++E I+ DD + ++++ PG + EA+ A++ K I + + GY Sbjct: 89 VLEAIDEAKNDDRIKGIYLNVTDPGCGYASAEALRGALEDFKEDGKFIVSYSDFYSLKGY 148 Query: 113 -LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF---- 167 L S A + V E S+ G+ + K LDK+GV + K K+ P+ Sbjct: 149 YLASVADQLYVNKEGSIAFD-GLAGGAVFFKDLLDKIGVEMMVFKVGTFKSAVEPYILNS 207 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFV--RLVSE---SRNIPYDKTLVLSDG--RIWTGAEAK 219 SE N + +SY + R++SE SRN+ + L+D + T Sbjct: 208 MSEANRTQI--------TSYLGDIWGRILSEVGASRNLDSVRLQSLADSMQSVQTTDSYL 259 Query: 220 KVGLIDVVGGQEEVWQSLYAL 240 GLID Q++ ++L +L Sbjct: 260 ANGLIDGALYQDQALEALCSL 280 >gi|94266545|ref|ZP_01290231.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] gi|93452820|gb|EAT03346.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] Length = 306 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSP 76 L +L +F SH E + + ++G I + +L+ ++ R D+ A+I+ + SP Sbjct: 35 LGSLAGGFFDSKSHRE----GIGVVEVKGVITSADQLLAQLAEFGRRDNIKAIILRIDSP 90 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GG+ A + +F +++V +KPV+ + +AAS G + + IVA +L GSIGV+ Sbjct: 91 GGAVGASQELFAEVKRVNQQKPVVAAMGSVAASGGLYAALGAERIVANPGTLTGSIGVII 150 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ ++ +++G +++KS +K +P + P+ QM+Q++VD + F+ V+ Sbjct: 151 KFANLEELFERIGYRSETIKSVDLKDSGAPDRPLAPEERQMLQEMVDDVHDQFIADVAAD 210 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R++ DGRI++G +A ++GL+D +G Sbjct: 211 RDLSTTTVRAFGDGRIFSGNQALELGLVDQLG 242 >gi|39996336|ref|NP_952287.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] gi|39983216|gb|AAR34610.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] Length = 260 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 113/186 (60%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 ++G I DSQE +++++ + + S A+++ + SPGG + I+ A++++ K V+ Sbjct: 15 VKGPIIDSQETVKQLDDLRKKSSVKAVVLRVESPGGVIGPSQEIYAAVKRLAATKKVVVS 74 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + +AAS GY ++ + +I A ++ GSIGVL + ++ +DK+G+ ++KS K Sbjct: 75 MGSVAASGGYHVAVPAAVIYANPGTITGSIGVLMKLSNIEGLMDKVGLKAFTLKSGKFKD 134 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 SP ++ + ++Q V+D+ + FVR V+E R +P ++ L+DGR++TG +A ++ Sbjct: 135 SGSPVRKLTEEERAVLQGVIDNLHDQFVRAVAEGRQLPVEEVRRLADGRVYTGEQALRLK 194 Query: 223 LIDVVG 228 L+D +G Sbjct: 195 LVDRLG 200 >gi|258648041|ref|ZP_05735510.1| signal peptide peptidase SppA [Prevotella tannerae ATCC 51259] gi|260851896|gb|EEX71765.1| signal peptide peptidase SppA [Prevotella tannerae ATCC 51259] Length = 587 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 123/215 (57%), Gaps = 12/215 (5%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ V+ ++ + +RG ++I+ ++ ++ DD+ A+++ ++S GGSAYA Sbjct: 304 VYYAYGDIVDAST---SSGGLRGDEIVGNQVIQDLDELANDDNIKAVVLRVNSGGGSAYA 360 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+ A++ +K +KPV+ + AAS GY ISC ++ I+A T++ GSIG+ P Sbjct: 361 SEQIWHAVELLKKKKPVVVSMGGTAASGGYYISCGADKIIADPTTVTGSIGIFGMIPDFS 420 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAV----QMMQDVVDSSYHWFVRLVSESR 197 + +KLG+ VK++ E S F + + +Q+ V+ Y F++ V+ R Sbjct: 421 GLMTEKLGLHFDIVKTN----EASDFGAMGRGMTAAEGEALQNYVNRGYGLFLKRVANGR 476 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 N ++ ++ GR+WTG +A K+GLID +G E+ Sbjct: 477 NKTVEQINQVAQGRVWTGRQALKLGLIDQLGTLED 511 >gi|126696719|ref|YP_001091605.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9301] gi|126543762|gb|ABO18004.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9301] Length = 269 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 37 HVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I I S + ++ +++I D ALIV + SPGG+ + I+ AI+++K Sbjct: 12 RMARIVIDEPITSSTRVSVLKALKQIE-DREFPALIVRIDSPGGTVGDSQEIYSAIKRLK 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 N+ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G+ + Sbjct: 71 NKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKVGIKFE 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP ++ + +++Q ++D SY F V++ RN+P ++ +DGRI+ Sbjct: 131 TVKSGVFKDILSPDKPLSEEGRRLLQGLIDESYKQFTEAVADGRNLPVEEVRKFADGRIF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA 239 TG +AK++GL+D V G E V + L A Sbjct: 191 TGTQAKELGLVDEV-GDEFVARELAA 215 >gi|119900256|ref|YP_935469.1| putative protease IV [Azoarcus sp. BH72] gi|119672669|emb|CAL96583.1| putative protease IV [Azoarcus sp. BH72] Length = 613 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 10/215 (4%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSS 75 FS + + VA + +G I D ++ L +I D++ A+++ + S Sbjct: 315 FSLRAARPRHRDRVAVLVAQGAIADGEQPASAVGGDTLARQIREAREDNAVKAVVLRIDS 374 Query: 76 PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGGSA+A E I R ++ + KPV+ + +AAS GY I+ ++ I A T++ GSIG+ Sbjct: 375 PGGSAFASEVIRRELELTRRAGKPVVASMSSVAASGGYWIAVGADEIWALPTTVTGSIGI 434 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 P V L +LGV + V + P+ P P ++P + MQ ++ Y F+ +V+ Sbjct: 435 FAMLPEVSGPLARLGVHVDGVATGPLAGMPDPRRALDPGMAKAMQLGIEHGYRRFLEVVA 494 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 E R + + ++ GR+WTG A ++GL+D +GG Sbjct: 495 EGRRMKVGEVDAVARGRVWTGETALELGLVDQLGG 529 >gi|296109597|ref|YP_003616546.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus infernus ME] gi|295434411|gb|ADG13582.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus infernus ME] Length = 300 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 119/192 (61%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+ I ++++ +D S +++ ++SPGG A E + + +++V +KPV+ + + A Sbjct: 57 DANYYINLLDKLEKDKSVKGVLLIINSPGGEVVASEELAKKVKEVSEKKPVVAYIQTIGA 116 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y+++ +SN IVA S+VGSIGV + + KLG+++ ++K+ K SP+ Sbjct: 117 SGAYMVASSSNYIVAQRHSVVGSIGVRMDIIHFYGLMKKLGINVTTIKAGKYKDIGSPYR 176 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + P+ ++++ +++ +Y++F+ V+++RN+ + T +++G+I+ G +AKKVGL+D VG Sbjct: 177 PMTPEEKKILEKMINETYNYFIMWVAKNRNLSINYTKKIAEGKIYLGEDAKKVGLVDEVG 236 Query: 229 GQEEVWQSLYAL 240 +E + L L Sbjct: 237 DEEVALKKLEEL 248 >gi|91204301|emb|CAJ71954.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 362 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 131/229 (57%), Gaps = 10/229 (4%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGY 112 E++E + D A+++ + SPGG A + ++ I K K +K ++ + ++AAS GY Sbjct: 113 EQLEHAANDVQVKAVLLEIESPGGGITASDIMYHQIIKFKKNTQKKIVVYMEDIAASGGY 172 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ IVA T++ GSIGV+ + F+++ GV S+ S MK SP ++ Sbjct: 173 YIASAADFIVAHPTTITGSIGVIMPLINISEFINRHGVVDNSIASGDMKEIGSPLKQMTE 232 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +++Q++++ Y FV +VS RN+ ++ ++DGRI+TG +A + GL+D +G E+ Sbjct: 233 EETEILQNIINEMYMQFVEVVSIGRNLDVEEVKKIADGRIYTGKQALEAGLVDKIGYLED 292 Query: 233 -VWQSLYALGVDQ-SIRKIKDWNPPKNYWFCDLKNLSISSLLE-DTIPL 278 + + A G+D+ +I + K + Y F +L L + L + +TI L Sbjct: 293 AIGMAKKASGIDEATIVRYK-----RLYGFAELFGLLCTKLSQKNTITL 336 >gi|34540445|ref|NP_904924.1| signal peptide peptidase SppA, 67K type [Porphyromonas gingivalis W83] gi|34396758|gb|AAQ65823.1| signal peptide peptidase SppA, 67K type [Porphyromonas gingivalis W83] Length = 595 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 131/236 (55%), Gaps = 15/236 (6%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +QEL + I+ + DD A+++ ++SPGGSA+ E I++ + +K +KP++ + ++AAS Sbjct: 334 TQELAKEIKAAADDDDIKAVVLRVNSPGGSAFTSEQIWKQVADLKAKKPIVVSMGDVAAS 393 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+CA+N IVA T+L GSIG+ +P K+GV++ V++S + F+ Sbjct: 394 GGYYIACAANSIVAEHTTLTGSIGIFGMFPNFAGVAKKIGVNMDVVQTSKYADLGNTFAP 453 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + ++Q ++ Y F+ VSE RN + ++ GR+W G +A +GL+D +GG Sbjct: 454 MTVEDRALIQRYIEQGYDLFLTRVSEGRNRTKAQIDSIAQGRVWLGDKALALGLVDELGG 513 Query: 230 QEEVWQ---SLYALGVDQSIRKIKDWNPPKNYWF--------CDLKNLSISSLLED 274 + + L LG + SI ++ K +F D+K+ +S++L D Sbjct: 514 LDTAIKRAAKLAQLGGNYSI----EYGKTKRNFFEELLSSSAADMKSAILSTILSD 565 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 4/190 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + +E I + + + T + + L + + E + RA+Q K + + G Sbjct: 85 QAVEAIGQAKNNPNITGIFLDLDNLSVGMASAEELRRALQDFKMSGKFVVSYADRYTQKG 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ + ++G IG+ Q + K LDK GV ++ K KA PF + Sbjct: 145 YYLSSIADKLYLNPKGMLGLIGIATQTMFYKDALDKFGVKMEIFKVGTYKAAVEPFMLNR 204 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE-AKKVGLIDVV 227 ++ + + ++ + ++ESR D + +D G ++ AE A ++ L+D + Sbjct: 205 MSDANREQITTYINGLWDKITSDIAESRKTAMDSVKMFADKGEMFGLAEKAVEMKLVDEL 264 Query: 228 GGQEEVWQSL 237 + +V + L Sbjct: 265 AYRTDVEKEL 274 >gi|303244900|ref|ZP_07331226.1| signal peptide peptidase SppA, 36K type [Methanothermococcus okinawensis IH1] gi|302484717|gb|EFL47655.1| signal peptide peptidase SppA, 36K type [Methanothermococcus okinawensis IH1] Length = 310 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 125/228 (54%), Gaps = 9/228 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D + I + + + A+++ ++ PGG A E + R +++V +KPV+ + + A Sbjct: 68 DVNDYIGALNDAENNPNIKAILLKVNCPGGEVIASEKLARKVKEVSKKKPVVAYIETLGA 127 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y+ +N IVA + S+VGSIGV + + KLG++ +K+ K SP+ Sbjct: 128 SGAYMTIAPANYIVAEKHSIVGSIGVRMDVIHYYGLMKKLGINATVIKAGKYKDIGSPYR 187 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + P+ ++ +++ +Y FV+ V+E+R++ ++TL ++GRI++G++AKKVGL+D VG Sbjct: 188 PMTPEEKACLEKMINETYMDFVKWVAENRHMTINETLKAANGRIYSGSDAKKVGLVDAVG 247 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 +E+ A+ + I I + PK + K I S++ + + Sbjct: 248 TEED------AINITAKIANISN---PKTEEYTPSKPAGIFSMMSNMV 286 >gi|319892761|ref|YP_004149636.1| Protease IV [Staphylococcus pseudintermedius HKU10-03] gi|317162457|gb|ADV06000.1| Protease IV [Staphylococcus pseudintermedius HKU10-03] gi|323464206|gb|ADX76359.1| exfoliative toxin [Staphylococcus pseudintermedius ED99] Length = 330 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 16/212 (7%) Query: 33 DNSPHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSPG 77 D++ +A I + G+I D+ Q ++++E I DDS +++S++SPG Sbjct: 51 DSNKKIAEIVVEGEIIDTGASGGLFGGGAGYNHQAALKQLETIKNDDSIKGVLLSVNSPG 110 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y + ++ I++VK+ K + ++ +AAS GY IS ++ I A SL GSIGV+ Sbjct: 111 GGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISAPADKIYAGPQSLTGSIGVIS 170 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + LD LG+ ++KS K S ++ + +++Q + S+ FV +V E Sbjct: 171 ESKDYSELLDNLGIKTNTIKSGAHKDILSSSRKMTDEEREILQSINKDSFDQFVNVVKEG 230 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R + K L+DGRI++ +AK GLID +G Sbjct: 231 RQMSESKVRELADGRIYSAQQAKSNGLIDAIG 262 >gi|198283845|ref|YP_002220166.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665192|ref|YP_002426483.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248366|gb|ACH83959.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517405|gb|ACK77991.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 23270] Length = 605 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 1/187 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAA 108 +Q I++++R+ + S A+++ ++SPGG A +AI AI ++ K KPVI + + A Sbjct: 341 AQATIKQLDRVGHEASVKAVVLQVNSPGGDVNAAQAIRAAILRIRKAHKPVIVSMGTLGA 400 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y +S A++ I A T+L IGV +P L KLG+ + ++ SPFS Sbjct: 401 SGAYWLSTAADRIYAHPTTLTADIGVFALFPNYAGLLKKLGIHYSGIATTRNANAMSPFS 460 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +Q +VD++Y FV LV+ +R+IP +K + GR W+G +A +GL++ +G Sbjct: 461 PLGKNVQKALQAMVDNTYADFVNLVANARHIPTNKVEHDAQGRAWSGLDAYHLGLVNALG 520 Query: 229 GQEEVWQ 235 G + Q Sbjct: 521 GMPQAIQ 527 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 16/149 (10%) Query: 26 SWSS----HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS-PGGSA 80 SW + H++ P A ++IR ++++ I+R S D L ++LS GGS Sbjct: 69 SWQTRALDHLDGRKP--AGVSIR-------QMVQAIDRASTDARIHLLELNLSDFGGGSI 119 Query: 81 YAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + RA+Q+ + + KP+ + + A YL++ +N I V G + Sbjct: 120 TQLDTVARALQRFRAHGKPIYAYAPDYSQDA-YLLAAQANHIYMPRLGTVLITGFSTRGL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y K LDKLG+++ S + K+ P + Sbjct: 179 YFKGLLDKLGITVYSFRQGKYKSAMEPLT 207 >gi|158521991|ref|YP_001529861.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] gi|158510817|gb|ABW67784.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] Length = 299 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 120/222 (54%), Gaps = 1/222 (0%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS 75 ++++ V +S E + V + ++G I S+++IE ++ +D+ A++V + S Sbjct: 24 TVISFVVGLYSGKPAFE-SGERVGIVEVKGVILSSEQVIEELKTFREEDAIRAIVVRIDS 82 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG+ + IFR I K K V+ + +AAS GY ++ A+ I A +L GSIGV+ Sbjct: 83 PGGAVGPAQEIFREIHKTAATKKVVASMGSVAASGGYYVASATEKIFANPGTLTGSIGVI 142 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Y + +DK+G+ +KS K SP + + +++Q+ D + F+ V+ Sbjct: 143 MSYTNFQELMDKIGLLPVVIKSGKYKDIGSPVRPLEEREKRILQEFADDIHQQFIDDVAA 202 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 RN+ L+DGRI+TG +A ++GL+D +G E+ +++ Sbjct: 203 GRNMDAGAVAKLADGRIYTGRKALELGLVDELGNLEDAVETV 244 >gi|78779664|ref|YP_397776.1| signal peptide peptidase A [Prochlorococcus marinus str. MIT 9312] gi|78713163|gb|ABB50340.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Prochlorococcus marinus str. MIT 9312] Length = 269 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 1/169 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNII 121 D ALIV + SPGG+ + I+ AI+++K++ VI ++AS G I AS+ I Sbjct: 39 DREFPALIVRIDSPGGTVGDSQEIYSAIKRLKDKGCKVIASFGNISASGGVYIGVASDKI 98 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++ GSIGV+ + + LDK+G+ ++VKS K SP ++ + +++Q + Sbjct: 99 VANPGTITGSIGVIIRGNNLSELLDKVGIKFETVKSGVFKDILSPDKPLSEEGRRLLQGL 158 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 +D SY F V+E RN+P ++ SDGRI+TG +AK++GL+D +G + Sbjct: 159 IDESYKQFTEAVAEGRNLPVEEVRKFSDGRIFTGTQAKELGLVDEIGDE 207 >gi|67924912|ref|ZP_00518304.1| Peptidase S49, SppA [Crocosphaera watsonii WH 8501] gi|67853246|gb|EAM48613.1| Peptidase S49, SppA [Crocosphaera watsonii WH 8501] Length = 272 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 127/225 (56%), Gaps = 4/225 (1%) Query: 35 SPHVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +ARI I G I ++++ + + ++ AL++ + SPGG+ + I+ A++++ Sbjct: 10 SKQIARIEITGAIASETRKYVLDALKTVKEKKFPALLLRIDSPGGTVGDSQEIYEALRRL 69 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 ++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 70 QDEVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLERLLDKVGVSFK 129 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K + E+ + ++Q+++D SY FV V++ RN+ DK +DGRI+ Sbjct: 130 VIKSGPYKDILAFDRELTDEEQHILQEMIDVSYQQFVTTVAQGRNLDVDKVKTFADGRIF 189 Query: 214 TGAEAKKVGLIDVVGGQEE--VWQSLYALGVDQSIRKIKDWNPPK 256 TG +A ++GL+D +G +E+ +W + A G++ D + PK Sbjct: 190 TGQQALELGLVDRLGTEEDARLWAAELA-GLNPDKATCYDLDEPK 233 >gi|260776353|ref|ZP_05885248.1| protease IV [Vibrio coralliilyticus ATCC BAA-450] gi|260607576|gb|EEX33841.1| protease IV [Vibrio coralliilyticus ATCC BAA-450] Length = 616 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 15/206 (7%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNDDKIKAVVLRVDSPGGSAFASEVIRNEIEALKETGKPVVASMSSLAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPK 173 ++ IVA T+L GSIG+ + L+KLGV V +SP + S+ Sbjct: 415 MGADRIVAQPTTLTGSIGIFSVITTFEKGLNKLGVYTDGVGTSPFSGVGITTGLSDGAAD 474 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 A QM ++ YH F+ LVSESR IP ++ GR+WTG +A K+GL+D +G ++ Sbjct: 475 AFQMG---IEHGYHRFIGLVSESREIPLKDMDSIAQGRVWTGQDAAKLGLVDKMGDFDD- 530 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYW 259 A+ + + K++D+N YW Sbjct: 531 -----AVKLAAELAKVEDYNL---YW 548 >gi|288957927|ref|YP_003448268.1| protease IV [Azospirillum sp. B510] gi|288910235|dbj|BAI71724.1| protease IV [Azospirillum sp. B510] Length = 585 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 130/252 (51%), Gaps = 19/252 (7%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATAL 69 Y + + + N P +A I G I S +++ IE + D A+ Sbjct: 278 YLAVAGNPNGNGPTIALINAVGTITGGESGKPATGGLSAGSDTIVQAIEEAADDPDVRAI 337 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 + + S GG+ A EAI RA+ + + + KPVI + + AAS GY I+ A++ IVA+ +L Sbjct: 338 LFRIDSGGGAVSASEAIRRALVRARQSGKPVIASMGDAAASGGYWIALAADRIVASPATL 397 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+ + DKLGV V+S+ SP + + ++D +Y Sbjct: 398 TGSIGVVAGKFAIGGLSDKLGVHWDGVRSARNAGMWSPLRPFGDSESERLTAIIDDTYAN 457 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE---VWQSLYALGVDQS 245 F++ V+E+R + D+ ++ GR+WTGA+A+ +GLID +GGQE+ + ++ L D Sbjct: 458 FLQRVAEARRMTPDQARGIAKGRVWTGAQARDLGLIDDLGGQEQALILARTAAGLAPDAP 517 Query: 246 IRKIKDWNPPKN 257 + + + PPK+ Sbjct: 518 V-TLAPYPPPKS 528 >gi|328948927|ref|YP_004366264.1| signal peptide peptidase SppA, 36K type [Treponema succinifaciens DSM 2489] gi|328449251|gb|AEB14967.1| signal peptide peptidase SppA, 36K type [Treponema succinifaciens DSM 2489] Length = 343 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 120/212 (56%), Gaps = 9/212 (4%) Query: 35 SPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + ++A++ I+G I +S + ++ IE + D + +++ ++SPGG Y + +F Sbjct: 71 NEYIAKLFIKGVISESNDSYNQEWILSTIENLQEDTNNRGIVLVINSPGGGVYQADEVFL 130 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 A++K K + +PV +AAS GY + CA++ I+A SL GSIGV+ Q+ + + Sbjct: 131 ALEKYKKKTERPVYAYFTSLAASGGYYVGCAADYIMANRNSLTGSIGVIAGQFTDLTGLM 190 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +K G+ ++ S K + + + ++MQ + D Y F +V+ESR + ++ Sbjct: 191 EKWGIKSTTIHSGRNKLMGNFNEPMTQEQQEIMQSIADECYEQFTDIVAESRGLSKEEVY 250 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L+DGRI+T ++AK+ LI+ +G +E+ +++ Sbjct: 251 KLADGRIYTASQAKEASLINSIGTLDELIETM 282 >gi|298708810|emb|CBJ30769.1| signal peptide peptidase [Ectocarpus siliculosus] Length = 625 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAA 108 S L +R++ + D S A+++ + SPGGSA A ++I A+++V+ KPV+ + ++AA Sbjct: 336 SSALCKRLQEVIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAA 395 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY+I+ A + IVA T++ GSIGV+ V+ L G+ + S++ S SP Sbjct: 396 SGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKAWGIQVDSIELSENHLAFSPLQ 455 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +P+ +M+ V Y FV V+ RN+ D+ L ++ GR+WTG +A GL+D +G Sbjct: 456 EFSPQQRSLMEKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELG 515 Query: 229 G 229 G Sbjct: 516 G 516 >gi|32490457|dbj|BAC79152.1| exfoliative toxin [Staphylococcus intermedius] gi|195972574|emb|CAR57917.1| exfoliative toxin [Staphylococcus pseudintermedius] Length = 330 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 16/212 (7%) Query: 33 DNSPHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSPG 77 D++ +A I + G+I D+ Q ++++E I DDS +++S++SPG Sbjct: 51 DSNKKIAEIVVEGEIIDTGASGGLFGGGAGYNHQAALKQLETIKNDDSIKGVLLSVNSPG 110 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y + ++ I++VK+ K + ++ +AAS GY IS ++ I A SL GSIGV+ Sbjct: 111 GGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISAPADKIYAGPQSLTGSIGVIS 170 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + LD LG+ ++KS K S ++ + +++Q + S+ FV +V E Sbjct: 171 ESKDYSELLDNLGIRTNTIKSGAHKDILSSSRKMTDEEREILQSINKDSFDQFVNVVKEG 230 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R + K L+DGRI++ +AK GLID +G Sbjct: 231 RQMSESKVRELADGRIYSAQQAKSNGLIDAIG 262 >gi|332300301|ref|YP_004442222.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica DSM 20707] gi|332177364|gb|AEE13054.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica DSM 20707] Length = 594 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 106/186 (56%), Gaps = 6/186 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S L +RI + DD AL+V ++SPGGS+Y E ++ A+ K KPV+ + + AAS Sbjct: 336 SDRLADRILEMGEDDDYDALVVRVNSPGGSSYISEQLWYAVHKASENKPVVISMGDYAAS 395 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSP 166 GY +S ++ I A +++ GSIG+ P +K+GV +K+ + + + A P Sbjct: 396 GGYYMSSGASYIFAEPSTITGSIGIFGVVPNATKLANKIGVHQDVVKTGQHADLGAPDRP 455 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++E + + Q V+ Y F++ VSE RN+ + ++ GR+WTGA+A +GL+D Sbjct: 456 WTE---EERALFQQYVNRGYALFLKRVSEGRNMTTTQVDSIAQGRVWTGAQALSLGLVDE 512 Query: 227 VGGQEE 232 +GG ++ Sbjct: 513 LGGLQD 518 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 21/205 (10%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++E I+ DD + ++++ PG + EA+ A++ K I + + GY Sbjct: 89 VLEAIDEAKNDDRIKGIYLNVTDPGCGYASAEALRGALEDFKEDGKFIVSYSDFYSLKGY 148 Query: 113 -LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF---- 167 L S A + V E S+ G+ + K LDK+GV + K K+ P+ Sbjct: 149 YLASVADQLYVNKEGSIAFD-GLAGGAVFFKDLLDKIGVEMMVFKVGTFKSAVEPYILNS 207 Query: 168 -SEVNPKAV-QMMQDVVDSSYHWFVRLVSE---SRNIPYDKTLVLSDG--RIWTGAEAKK 220 SE N + + D+ W R++SE SRN+ + L+D + Sbjct: 208 MSEANRTQITSYLGDI------WG-RILSEVGASRNLDSVRLQSLADSMQSVRPTDSYLA 260 Query: 221 VGLIDVVGGQEEVWQSLYAL-GVDQ 244 GLID Q++ ++L +L GVD+ Sbjct: 261 NGLIDGALYQDQALETLCSLVGVDE 285 >gi|256822612|ref|YP_003146575.1| signal peptide peptidase SppA, 67K type [Kangiella koreensis DSM 16069] gi|256796151|gb|ACV26807.1| signal peptide peptidase SppA, 67K type [Kangiella koreensis DSM 16069] Length = 619 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 13/230 (5%) Query: 34 NSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N VA I +G+I D I++ DD A+++ + SPGGSA+A E Sbjct: 320 NKDTVAVIVAKGEIVDGSRKEGVIGGDSTARLIQKARLDDKVKAIVLRVDSPGGSAFASE 379 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I +++ +N K V+ + +AAS GY IS S+ I A T++ GSIG+ P + Sbjct: 380 VIRSELERAQNEGKIVVASMGGVAASGGYWISATSDEIWAHPTTITGSIGIFGMIPTFEE 439 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+KLGV V ++ P ++P+ Q++Q ++ Y F+ LV E RN+ ++ Sbjct: 440 PLNKLGVYRDGVGTTKWTLAFDPMDGISPEIAQLIQRSIERGYERFLSLVGEGRNMTIEE 499 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS---LYALGVDQSIRKIK 250 ++ GR+W+G +A ++GL+D +G E+ +S L +G D +++ IK Sbjct: 500 VDQIAQGRVWSGEDAHRLGLVDQLGDLEDAIESAAKLANIGDDYAVKFIK 549 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRKPVITEVHEMA 107 +L++ IE DD + ++++++S G YAG + + RAI K + V + Sbjct: 88 DLLDAIEYAKNDDRISVMVINVNSLQG-VYAGISKYQDLRRAIDDFKESGKKVIAVGDYY 146 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ +++ + ++ G+ Y K LD LGV + + K+ PF Sbjct: 147 MQGQYYLASSADEVYMNPFGMLMFEGLGRNGTYFKSALDNLGVKVHVFRVGTFKSAVEPF 206 >gi|118580963|ref|YP_902213.1| signal peptide peptidase SppA, 36K type [Pelobacter propionicus DSM 2379] gi|118503673|gb|ABL00156.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pelobacter propionicus DSM 2379] Length = 295 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 121/226 (53%), Gaps = 7/226 (3%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V + +RG I DS+E + ++ + D A+++ + SPGG + I ++K RK Sbjct: 44 VGLVEVRGMILDSRETVRQLRYFLKQDEIRAVVLRVDSPGGVVAPSQEICEEVRKFAARK 103 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + +AAS GY +S + +I A +L SIGV+ + ++ +D++G+ ++K+ Sbjct: 104 KIIVSMGSLAASGGYYVSAPATLIYANPGTLTASIGVILKLSNIETLMDRIGIKSHTLKT 163 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP +++ M+Q V+DS++ FVR V+ R +P + ++DGRI +G + Sbjct: 164 GKYKDSGSPLRKLSEDDRAMLQSVIDSTHEQFVRAVASGRKLPVQQVRRIADGRILSGEQ 223 Query: 218 AKKVGLIDVVGG-QEEVWQSLYALGVDQSIRKIKDWNPPK---NYW 259 A + L+D +G Q+ + ++ G++ + PP+ NYW Sbjct: 224 ALALKLVDRLGTLQDAIEEAGRLSGIEGEPEVVL---PPRKKVNYW 266 >gi|218440875|ref|YP_002379204.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7424] gi|218173603|gb|ACK72336.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7424] Length = 605 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 120/219 (54%), Gaps = 15/219 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSS 75 F + E S +A + G+I D Q + I +I +D + A+++ ++S Sbjct: 305 FLRENQNESASNQIAVVYAEGEIVDGQGAVSNIGGERFAKELRKIRQDPNVKAVVLRINS 364 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGGSA A + I R ++ +K +KPVI + +AAS GY I+ +N I A +++ GSIGV Sbjct: 365 PGGSATASDIIGREVKLMKEKKPVIVSMGNVAASGGYWIATEANHIFAEPSTITGSIGVF 424 Query: 136 FQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + G++ +K+ K + + P +E + + + Q V Y+ FV Sbjct: 425 GMLFNVQDIANNNGITWDVVKTAKLADLGTTTRPKTE---QELAIYQRSVQQIYNLFVNK 481 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 V++SRN+P K +++GR+W+G +AK++GL+D +GG E Sbjct: 482 VAQSRNLPESKVKQIAEGRVWSGEDAKQLGLVDEIGGLE 520 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 110/233 (47%), Gaps = 17/233 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIER-----IERISRDDSATALIV---S 72 +++ F S ++D P + + Q +D+ + R IE+ ++D A+ + Sbjct: 50 SILVFDLSMQIQDTKPP-STLTQALQNDDTVTMTLRQVLGVIEKATKDAQIEAIFIDGRG 108 Query: 73 LSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + G A E + + ++K + +K + +V ++ + YL S A II+ ++ Sbjct: 109 IEADNGIATLTE-VRQGLEKFRAAGKKIIFYDV-DLNEKSYYLGSVADEIILNP-MGMME 165 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHW 188 G+ Q ++ L+K G+ I+ ++ KA PF ++P+ Q +++ + Sbjct: 166 FNGIGTQPLFLAGALEKYGIGIQVIRVGEFKAAVEPFIRQTMSPENRLQTQVLLNDLWTN 225 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + V +SRN+ +K ++D + + EA+K+GLID V +EV L L Sbjct: 226 VLTTVGKSRNVTPNKLQAIADNQGMLMPTEAEKIGLIDRVAYFDEVVTDLKTL 278 >gi|113476113|ref|YP_722174.1| signal peptide peptidase A [Trichodesmium erythraeum IMS101] gi|110167161|gb|ABG51701.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Trichodesmium erythraeum IMS101] Length = 272 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 134/240 (55%), Gaps = 6/240 (2%) Query: 37 HVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I E ++++E ++ + + AL++ + SPGG+ + I+ A++K++ Sbjct: 12 QIARIEINGVIASETRKQVLEALKTVE-ERKFPALLLRIDSPGGTVADSQEIYNALKKLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I++ ++ GSIGV+ + ++ L+K+GVS K Sbjct: 71 EKVKIVASFGNISASGGVYIGMGAQNIMSNPGTITGSIGVILRGNNIERLLEKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS P K + E+ Q++QD++D SY FV+ V+E+RN+ + +DGRI+T Sbjct: 131 VKSGPYKDILAFDREMTAPEKQILQDLIDFSYQQFVQTVAEARNLAVETVKSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKNYWFCDLKNLSISSLL 272 G +A ++G++D +G +E+ + L VD K + + PK + L N +SS L Sbjct: 191 GQQALELGVVDRLGTEEDARKWACNL-VDLDPEKTESFTLEKPKTFLNKVLNNNQVSSKL 249 >gi|328951771|ref|YP_004369105.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] gi|328452095|gb|AEB07924.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 123/239 (51%), Gaps = 2/239 (0%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG 77 V L V+ + S V + + G I D++ + +++ ++ A++V ++SPG Sbjct: 23 VALLVLPLAGDSLPLAKGDRVGVVEVSGLIRDAKTTLNHLKKFRENNRIRAIVVRVNSPG 82 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G+ + I + + + +K V+ + +AAS GY I ++II+A +L GSIGV+ Sbjct: 83 GAVGPSQEILEEVIRTREKKKVVASLGTVAASGGYYIVSGADIIMANPGTLTGSIGVIMN 142 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + V+ L K+G+ + ++K+ K SP + P + +Q ++D+ + F+R V+ R Sbjct: 143 FTNVEQLLSKIGLELFNLKAGKYKDVGSPLRPMTPVEKEYIQGLLDNVHEQFIRDVAHGR 202 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + K + DGRI+TG E K +GL+D +G + LG + K++ PPK Sbjct: 203 RMLVHKVREVGDGRIFTGEEGKNLGLVDALGNLPDAIDLAGRLGGIKG--KVEAVYPPK 259 >gi|260583283|ref|ZP_05851058.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae NT127] gi|260093643|gb|EEW77556.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae NT127] Length = 615 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 133/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+++ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGAIIDGESDDENSGGDTIARILRKAHDDNSVKAVVLRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A E ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADENTITGSIGIFAMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GVS V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVSSDGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + I+D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAIQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI + KN KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFKNAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +G + G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGKVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-----VLSDGRIWTG---A 216 F ++++ +A MQ + ++ +V VSE+R I D L LSD + G A Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRKIKKDNVLPNAKQYLSDLKALKGNSTA 266 Query: 217 EAKKVGLI-DVV 227 A++ GL+ DVV Sbjct: 267 YAQQRGLVTDVV 278 >gi|172038284|ref|YP_001804785.1| protease IV, 36K short form [Cyanothece sp. ATCC 51142] gi|171699738|gb|ACB52719.1| protease IV, 36K short form [Cyanothece sp. ATCC 51142] Length = 272 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 130/227 (57%), Gaps = 6/227 (2%) Query: 35 SPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +ARI I G I E + ++E + + ++ AL++ + SPGG+ + I+ A+++ Sbjct: 10 SKQIARIEITGAIASETRKYVLEALNTV-KEKKFPALLLRIDSPGGTVGDSQEIYEALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LQDKVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLERLLDKIGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K + E+ + ++Q+++D+SY FV V++ RN+ +K +DGRI Sbjct: 129 KVIKSGPYKDILAFDRELTEEEHHILQEMIDTSYQQFVTTVAQGRNLDVNKVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEV--WQSLYALGVDQSIRKIKDWNPPKN 257 +TG +A ++G++D +G +E+ W + A G++ + D PK+ Sbjct: 189 FTGQQALELGVVDRLGTEEDARRWAAELA-GLNPDKAQCYDIEEPKS 234 >gi|302035808|ref|YP_003796130.1| peptidase S49, putative signal peptide peptidase SppA [Candidatus Nitrospira defluvii] gi|300603872|emb|CBK40204.1| Peptidase S49, putative signal peptide peptidase SppA [Candidatus Nitrospira defluvii] Length = 299 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 112/194 (57%), Gaps = 2/194 (1%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 VA I I G I D+Q I ++ S + A+++ + SPGG + I A+++VKN+ Sbjct: 47 RVALIRIEGVILDAQATISELKHYSENPLVKAIVLRIDSPGGGVVPSQEIHDAVKRVKNK 106 Query: 97 --KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 K VI + +AAS GY I+ A++ I+A +L GSIGV+ + + + K+GV Sbjct: 107 SNKAVIASMGTVAASGGYYIAAATDRIIANPGTLTGSIGVIMEMANFEGLMKKVGVEGVV 166 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS K SP +++ + +++Q V+D +H F++ V++ R++ L+DGRI+T Sbjct: 167 IKSGRFKDVGSPLRKMSDEERKLLQSVMDDVHHQFIQAVADGRSLEVSDVEPLADGRIYT 226 Query: 215 GAEAKKVGLIDVVG 228 G +AK+ L+D +G Sbjct: 227 GRQAKEARLVDELG 240 >gi|116327402|ref|YP_797122.1| periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331960|ref|YP_801678.1| periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120146|gb|ABJ78189.1| Periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125649|gb|ABJ76920.1| Periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 317 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 114/191 (59%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+ +++++ I ++ + +++ ++SPGG+ A + ++ + +++ + ++ + +MAAS Sbjct: 72 SESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMAAS 131 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ +++ I A ++ GSIGV+ P +K LD+ GV +++ K K S F + Sbjct: 132 GGYYIASSADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEGKYKDSLSLFRD 191 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 P+ +M+Q ++ +Y+ FV+ V++ RN L++GRI++G +A + L+D +GG Sbjct: 192 STPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDAFRNKLVDEIGG 251 Query: 230 QEEVWQSLYAL 240 ++E + L L Sbjct: 252 RKEALEELSRL 262 >gi|116515107|ref|YP_802736.1| hypothetical protein BCc_171 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256961|gb|ABJ90643.1| protease IV, a signal peptide peptidase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 621 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 123/229 (53%), Gaps = 21/229 (9%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 +E+N A + I + L+ I+ D S A+I+ ++SPGG+ E I + + Sbjct: 340 IENNCKRSANLNI-------ENLLNEIDEAKNDSSVKAVILRINSPGGTVKYSEIIRKKL 392 Query: 91 QKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ K KP+I + ++ AS GY IS A + I+A +T+L GSIG+ P ++ L +G Sbjct: 393 LELHKCNKPLIISMGDVCASGGYWISTAGDYIIAHDTTLTGSIGIFAVIPTIEKILSTIG 452 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + +K+ + + S F E++ ++ + + D + Y F+ +V++SR + Y KT +S Sbjct: 453 IKQYQIKTKYYE-DFSIFHELSEQSKKSIGDNIIREYKKFITIVAQSRKLSYKKTHSISQ 511 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 GR+WTG +A+K+GL+D +G +D +I+K KNY Sbjct: 512 GRVWTGYQAQKIGLVDEIG------------DLDHAIKKAAQLANIKNY 548 >gi|313206075|ref|YP_004045252.1| signal peptide peptidase sppa, 67k type [Riemerella anatipestifer DSM 15868] gi|312445391|gb|ADQ81746.1| signal peptide peptidase SppA, 67K type [Riemerella anatipestifer DSM 15868] gi|315023746|gb|EFT36749.1| putative protease IV [Riemerella anatipestifer RA-YM] Length = 584 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 103/178 (57%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ IE I + DD A+++ ++SPGGSA A + I +Q++K +KP+I + AAS Sbjct: 325 EKYIEYIRDLKDDDDIKAVVLRINSPGGSANASDQILFELQQLKLKKPLIVSFGDYAASG 384 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+ A + I + ++ GSIGV P K +K G+ V ++ SP S + Sbjct: 385 GYYIAMAGDKIYSEPNTITGSIGVFGMIPDFKNLANKNGIRSDVVSTNTNSQMMSPISGI 444 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 M+Q+ V+ +Y FV V+++RN +++ ++ GR+W+G +AK++GL+D +G Sbjct: 445 TEGTKNMLQNSVEQTYKRFVYFVTKNRNKTFEQVDEIAGGRVWSGKKAKELGLVDELG 502 >gi|134301011|ref|YP_001114507.1| signal peptide peptidase SppA, 36K type [Desulfotomaculum reducens MI-1] gi|134053711|gb|ABO51682.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfotomaculum reducens MI-1] Length = 313 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 102/162 (62%), Gaps = 1/162 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+I+ L++ GG+ + I R +++V K+ K V+ + EMAAS GY ISC ++ IVA Sbjct: 84 AVILKLNTGGGTVVGSDEIGREVERVRKSGKKVVAAMGEMAASGGYWISCKADKIVANPG 143 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + GSIGV+ Q +K +KLGV + ++K+ K + +++P+ Q+ Q +V+ SY Sbjct: 144 TFTGSIGVIMQLTEMKDLYNKLGVEVNNIKTGAFKDMGASNKDLSPEERQIFQGLVNDSY 203 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+++V+ R + + L+DGRI+TG +AK++GL+D +G Sbjct: 204 EDFIQVVAAGRKMDPTQVRKLADGRIYTGKQAKQLGLVDELG 245 >gi|150024502|ref|YP_001295328.1| protease IV (signal peptide peptidase) [Flavobacterium psychrophilum JIP02/86] gi|149771043|emb|CAL42510.1| Protease IV (signal peptide peptidase) [Flavobacterium psychrophilum JIP02/86] Length = 587 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 124/227 (54%), Gaps = 15/227 (6%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 ++ +DD+ A+++ ++SPGGSA + I+R I+ K KPVI + +AAS GY I+C Sbjct: 332 LQEARKDDNIKAIVLRVNSPGGSALTSDLIWREIEITKKVKPVIVSMGNLAASGGYYIAC 391 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 +N I A +++ GSIGV P + K G++ + V++ + S F + Q Sbjct: 392 NANKIFAEASTITGSIGVFGTLPNLSAVTKKYGINTELVETHENASGYSLFKPLEDNFRQ 451 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + Q+ V+ Y+ FV V++ R + + + ++ GR+W G++A ++GL+D +GG ++ Sbjct: 452 ITQEGVEHIYNVFVTRVAKGRKMTFAQVDAIAQGRVWAGSDALRLGLVDKIGGLDD---- 507 Query: 237 LYALGVDQSIRKIKDWNP---PKNYWFCDLKNLSISSLLEDTIPLMK 280 AL ++ K+K+++ PK + D K L S L P MK Sbjct: 508 --ALAYASNLVKLKEYSTVDYPK--YEKDFKELFSGSGL----PFMK 546 >gi|166368609|ref|YP_001660882.1| protease IV [Microcystis aeruginosa NIES-843] gi|166090982|dbj|BAG05690.1| protease IV [Microcystis aeruginosa NIES-843] Length = 604 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 133/259 (51%), Gaps = 24/259 (9%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+S +A + G I + Q +L + + ++ + A+++ ++SPGGSA A Sbjct: 313 DSSDQIAIVYAEGTIVEGQGDRGEIGGDKLAKELRKLQGKEEVKAVVLRINSPGGSATAS 372 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R I+++ +KPVI + ++AAS GY I+ I A ++ GSIGV ++ Sbjct: 373 EVILREIKRLDAKKPVIISLGDVAASGGYWIAMGGQRIFADNDTITGSIGVFGLLLNIQK 432 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + G+ +VK+ + + NP+ +++ Q V+ Y F+ V++ R + DK Sbjct: 433 IANNNGIDWDTVKTGQLADISTITRPKNPQELEIYQAAVNRFYDLFIETVAKGRKLSPDK 492 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-----LGVDQSIRKIKDWNPPKNY 258 ++ GR+WTG +A K+GL+D +GG E Q YA LG D S+++ P Sbjct: 493 VRTVAQGRVWTGKDAVKIGLVDQIGGLEAAVQ--YAAKTAKLGDDWSLKEY----PRSQS 546 Query: 259 WFCDLKNLSISSLLEDTIP 277 W +L +S+LL+ +P Sbjct: 547 WQEEL----LSNLLQTYLP 561 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 13/186 (6%) Query: 51 QELIERIERISRDDSATALIV-SLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMA 107 +++I IE+ + DDS L++ + G YA + +A+ K + K +I E Sbjct: 84 RQVIAAIEKAALDDSIVGLLLYGRGTVGEYGYATLTEVRQALAKFRQSGKKIIAYDVEWT 143 Query: 108 ASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 YL S A +I+ + VG + G+ Q + L+K GV ++ VK K Sbjct: 144 EKEYYLASVAEKVII----NPVGRMEINGLSSQQTFFADALEKYGVGVQVVKVGSFKGAV 199 Query: 165 SPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKV 221 P++ +++ + Q +Q ++D+ + + V++SRN+ + +SD + I AKK Sbjct: 200 EPYTRQDLSVQNRQQLQTLLDTIWSNYSATVAKSRNLTPQQVQTISDTQGILEATTAKKA 259 Query: 222 GLIDVV 227 G +D V Sbjct: 260 GFVDEV 265 >gi|284037297|ref|YP_003387227.1| signal peptide peptidase SppA, 67K type [Spirosoma linguale DSM 74] gi|283816590|gb|ADB38428.1| signal peptide peptidase SppA, 67K type [Spirosoma linguale DSM 74] Length = 589 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 3/216 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+ ++E + + DD A+++ ++S GGSA A + ++R +Q + KPVI + + AAS Sbjct: 329 SETIVEELRKARLDDKVKAIVLRVNSGGGSALASDVMYREVQLARKSKPVIGSMSDYAAS 388 Query: 110 AGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 GY + + IVA ++ GSIGV + F DKLGV+ VK++ P+ Sbjct: 389 GGYYMLMGCDKIVAQPNTITGSIGVFSLLFNTENFFKDKLGVTYDRVKTNTNADFPTGTH 448 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E+ P Q MQ + Y F + R +P D ++ GR+WTG++ K +GL+D +G Sbjct: 449 EMTPFQKQTMQRATERIYAEFTGKAAAGRKLPIDSLRAIAGGRVWTGSQGKALGLVDQLG 508 Query: 229 GQEE-VWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 G ++ V + + + K+K + P K +F L Sbjct: 509 GLDDAVKLAAQTAKLKEGDYKLK-YQPRKKEFFEQL 543 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 10/200 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 EL + ++ DD + + SP + E I A+ K K + E G Sbjct: 82 ELKQTLKEAKDDDKIKGIYLQTESPAAGWASLEEIRNALIDFKQSKKFVYAYAETMTEKG 141 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF---- 167 Y I+ ++ I + G+ + + K LDKLG+ + K K+ PF Sbjct: 142 YYIASVADKIYLNPAGDLEWNGLNAELSFFKGTLDKLGIKPEIFKVGEFKSAVEPFIRED 201 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLID 225 S+ N K V + V+ H VR +++SRN+ D +D I A+A + L+ Sbjct: 202 MSDPNRKQVNSFLNSVND--HMLVR-IAQSRNLRVDSLKRYADNLTIQKPADALRTKLVT 258 Query: 226 VVGGQEEVWQSLYA-LGVDQ 244 +G Q+E+ + LGVD+ Sbjct: 259 NIGYQDELESVIKKQLGVDE 278 >gi|290968387|ref|ZP_06559927.1| signal peptide peptidase SppA, 36K type [Megasphaera genomosp. type_1 str. 28L] gi|290781574|gb|EFD94162.1| signal peptide peptidase SppA, 36K type [Megasphaera genomosp. type_1 str. 28L] Length = 315 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 105/177 (59%), Gaps = 1/177 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAG 111 L+++I + + D A+++ + SPGGSA A + I R +Q+ K N PV+ + + AAS G Sbjct: 71 LMKQIRQATADAEVGAILLRIDSPGGSAAATQEIARELQRAKDNHIPVVVSMGDTAASGG 130 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ++ + + A +++ GSIGV Y + KLG+ + +KS K SPF + Sbjct: 131 YWLAVYGDTLFADPSTITGSIGVYMSYYDARGLSRKLGIREEKIKSGAHKDIFSPFRPMT 190 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + QM QD+V+ Y+ FV +V++ R++ + L+DGR++TG+ AK +GL+D +G Sbjct: 191 AEEKQMTQDMVNEMYNQFVTVVAKERHMRPETVRALADGRVYTGSRAKALGLVDRLG 247 >gi|170079132|ref|YP_001735770.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7002] gi|169886801|gb|ACB00515.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7002] Length = 272 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 128/224 (57%), Gaps = 6/224 (2%) Query: 37 HVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 VARI I G I + + +++ +E + + AL++ + SPGG+ + I+ A++K++ Sbjct: 12 QVARIEITGAIAADTRKRVLKALEEVE-EKKYPALLLRIDSPGGTVGDSQEIYYALKKLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + IVA ++ GSIGV+ + ++ L+K+GVS K Sbjct: 71 EKTKIVASFGNISASGGVYIGMGAQHIVANPGTITGSIGVILRGNNLERLLEKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ ++Q+++D SY FV+ V+E+RN+ + +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTEAEENILQEMIDVSYGQFVKTVAEARNLDVETVKTFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE--VWQSLYALGVDQSIRKIKDWNPPK 256 G +A+++G++D +G +E+ +W + A G+D + + PK Sbjct: 191 GEQAQELGVVDRLGTEEDARIWAAKLA-GLDPDKAECRTIEEPK 233 >gi|309973214|gb|ADO96415.1| Protease IV [Haemophilus influenzae R2846] Length = 615 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 133/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+++ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGAIIDGESDDENSGGDTIARILRKAHDDNSVKAVVLRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A E ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADENTITGSIGIFAMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GVS V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVSSDGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKK 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI + KN KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFKNAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +G + G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGKVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-----VLSDGRIWTG---A 216 F ++++ +A MQ + ++ +V VSE+R I D L LSD + G A Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRKIKKDNVLPNAKQYLSDLKALKGNSTA 266 Query: 217 EAKKVGLI-DVV 227 A++ GL+ DVV Sbjct: 267 YAQQRGLVTDVV 278 >gi|257058310|ref|YP_003136198.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8802] gi|256588476|gb|ACU99362.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8802] Length = 272 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 122/213 (57%), Gaps = 4/213 (1%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I ++++ + + + +D AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIASETRQTVLKALKTVKDKKFPALLLRIDSPGGTVADSQEIYEALKELRK 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+G+S K + Sbjct: 72 SVKIVASFGNISASGGVYIGVGAEYIVANPGTITGSIGVILRGNNLERLLDKVGISFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K S E+ + ++Q+++D SY FV V++ RN+ +K +DGRI+TG Sbjct: 132 KSGPYKDILSFDRELTEEEQTILQEMIDVSYQQFVTTVAQGRNLSVEKVKSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEEV--WQS-LYALGVDQS 245 +A ++G++D +G +E+ W + L L DQ+ Sbjct: 192 QQALELGVVDRLGTEEDARRWAAELAGLKPDQA 224 >gi|78222959|ref|YP_384706.1| signal peptide peptidase A [Geobacter metallireducens GS-15] gi|78194214|gb|ABB31981.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Geobacter metallireducens GS-15] Length = 301 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 117/198 (59%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V + ++G I +S+E+++++ + + + A+++ + SPGG + I+ A++K+ K Sbjct: 43 VGYVEVKGPILESEEIVKQLSEMRKKTNVKAVVLRIESPGGVIGPSQEIYEAVKKLAKTK 102 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ + +AAS GY I+ + +I A ++ GSIGVL + V+ +DK+G+ ++KS Sbjct: 103 KVVVSMGSVAASGGYHIAIPAAVIYANPGTITGSIGVLMKLANVEGLMDKVGMKAFTLKS 162 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP + + ++Q V+D+ + FV+ V+E+R +P ++ L+DGR++TG + Sbjct: 163 GKFKDAGSPVRALTDEDRALLQGVIDNLHTQFVKAVAEARKLPVEEVRRLADGRVYTGEQ 222 Query: 218 AKKVGLIDVVGGQEEVWQ 235 A + L+D +G E+ + Sbjct: 223 AVSLKLVDRLGTLEDAVE 240 >gi|313675194|ref|YP_004053190.1| signal peptide peptidase sppa, 67k type [Marivirga tractuosa DSM 4126] gi|312941892|gb|ADR21082.1| signal peptide peptidase SppA, 67K type [Marivirga tractuosa DSM 4126] Length = 597 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 10/206 (4%) Query: 34 NSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 NS +A I G I S + I + DD A+++ ++SPGGSA A + Sbjct: 311 NSNRIAVIVAEGNIVSGKGGDGAIGSDVFAKEIRKARLDDKIKAIVLRINSPGGSALASD 370 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++R ++ K KPVI + +AAS GY ++ A + IVA ++ GSIG+ P + F Sbjct: 371 VMWREVKLAKKVKPVIASMSSVAASGGYYMAMACDTIVAQPNTITGSIGIFAIIPDLSKF 430 Query: 145 LD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +D KLG++ V + + +N +++Q+ V+ Y F +E RN+ D+ Sbjct: 431 MDTKLGITFDRVSTGEYSDLYTVTRSLNEAEKRIIQNSVERGYEDFTSKAAEGRNMQIDE 490 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGG 229 L ++ GR+W+G EAK GL+DV+GG Sbjct: 491 LLAVASGRVWSGIEAKDNGLVDVLGG 516 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 12/205 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSP---GGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++++E IE D+ + L +P G A E I ++ KPV+ Sbjct: 92 KDILESIEHAKTDEKIKG--IYLDAPFVLAGFAQMEEIRNALINFKESGKPVLAYAEAFT 149 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y+ S A NI++ L S G+ + + K L+KL V + + K+ PF Sbjct: 150 ETGYYVASVADNIVLNPAGMLDMS-GLSSEVTFFKGTLEKLKVEPQIFRVGTFKSAVEPF 208 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLI 224 +++ + + + +++S Y F+ +++SR I + +SD ++ T +A L+ Sbjct: 209 IRKDMSEASKEQISVLLNSVYGVFIENIAKSRGIDAKELRAISDQLKVRTTEDALNFKLV 268 Query: 225 DVVGGQEEV---WQSLYALGVDQSI 246 +G +EV + + LG D I Sbjct: 269 TQLGYYDEVLTKMREIAGLGEDAKI 293 >gi|218245277|ref|YP_002370648.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8801] gi|218165755|gb|ACK64492.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8801] Length = 272 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 122/213 (57%), Gaps = 4/213 (1%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I ++++ + + + +D AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIASETRQTVLKALKTVKDKKFPALLLRIDSPGGTVADSQEIYEALKELRK 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+G+S K + Sbjct: 72 SVKIVASFGNISASGGVYIGVGAEYIVANPGTITGSIGVILRGNNLERLLDKVGISFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K S E+ + ++Q+++D SY FV V++ RN+ +K +DGRI+TG Sbjct: 132 KSGPYKDILSFDRELTQEEQTILQEMIDVSYQQFVTTVAQGRNLSVEKVKSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEEV--WQS-LYALGVDQS 245 +A ++G++D +G +E+ W + L L DQ+ Sbjct: 192 QQALELGVVDRLGTEEDARRWAAELAGLKPDQA 224 >gi|124515664|gb|EAY57173.1| Peptidase S49 (SppA) [Leptospirillum rubarum] gi|206602280|gb|EDZ38762.1| Peptidase S49 (SppA) [Leptospirillum sp. Group II '5-way CG'] Length = 295 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 145/290 (50%), Gaps = 15/290 (5%) Query: 10 TRYVMLSLVTLTVVYF--SWSSHVEDNSP-----HVARIAIRGQIEDSQELIERIERISR 62 RYV + + +++ + H P + I I G I S++ I +I ++ Sbjct: 8 ARYVGIFIAVTALIFLLGRAAGHFGRALPLVGGAEIGVIRINGVILHSEKTIRQIRTLAS 67 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A+++ ++SPGG+ + I+ + K + + K V++ + + AS Y I+ AS+ I Sbjct: 68 DPEVKAILLRINSPGGAVVPSQDIYEEVLKARKKGKIVVSSIGTVGASGAYYIASASDFI 127 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A+ SL GSIGV+ + VK LDK+GV + VKS MK SPF + M+ + Sbjct: 128 MASSGSLTGSIGVIMELAEVKDLLDKIGVHSEVVKSGKMKDVGSPFRPMTADEKAYMKSL 187 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D+ + F+ VS+ R++ DK L+DGR++TG A + L+D +G + + + Sbjct: 188 LDNIHQQFILAVSKGRHLSVDKIDPLADGRVFTGEMAFRYHLVDGIGDYRDALRKAATMA 247 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + I I++++ K L + +S+LL + + G W++ Sbjct: 248 HLKVIPAIREFH--KKGVLNSLISSKVSTLLGGGL-----GESTGFWSIL 290 >gi|188994544|ref|YP_001928796.1| signal peptide peptidase SppA 67K type [Porphyromonas gingivalis ATCC 33277] gi|188594224|dbj|BAG33199.1| signal peptide peptidase SppA 67K type [Porphyromonas gingivalis ATCC 33277] Length = 595 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 130/236 (55%), Gaps = 15/236 (6%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +QEL + I+ + DD A+++ ++SPGGSA+ E I++ + +K +KP++ + ++AAS Sbjct: 334 TQELAKEIKAAADDDDIKAVVLRVNSPGGSAFTSEQIWKQVADLKAKKPIVVSMGDVAAS 393 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+CA+N IVA T+L GSIG+ +P K+GV++ V++S + F+ Sbjct: 394 GGYYIACAANSIVAEHTTLTGSIGIFGMFPNFAGVAKKIGVNMDVVQTSKYADLGNTFAP 453 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + ++Q ++ Y F+ VSE RN + ++ GR+W G +A +GL+D +GG Sbjct: 454 MTVEDRALIQRYIEQGYDLFLTRVSEGRNRTKAQIDSIAQGRVWLGDKALALGLVDELGG 513 Query: 230 QEEVWQ---SLYALGVDQSIRKIKDWNPPKNYWF--------CDLKNLSISSLLED 274 + + L LG + SI ++ K +F D+K+ +S +L D Sbjct: 514 LDTAIKRAAKLAQLGGNYSI----EYGKTKRNFFEELLSSSAADMKSAILSIILSD 565 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 4/190 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + +E I + + + T + + L + + E + RA+Q K + + G Sbjct: 85 QAVEAIGQAKNNPNITGIFLDLDNLSVGMASAEELRRALQDFKMSGKFVVSYADRYTQKG 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ ++ + ++G IG+ Q + K LDK GV ++ K KA PF + Sbjct: 145 YYLASIADKLYLNPKGMLGLIGIATQTMFYKDALDKFGVKMEIFKVGTYKAAVEPFMLNG 204 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE-AKKVGLIDVV 227 ++ + + ++ + ++ESR D + +D G ++ AE A ++ L+D + Sbjct: 205 MSDANREQITTYINGLWDKITSDIAESRKTAMDSVKMFADKGEMFGLAEKAVEMKLVDEL 264 Query: 228 GGQEEVWQSL 237 + +V + L Sbjct: 265 AYRTDVEKEL 274 >gi|51893930|ref|YP_076621.1| putative proteinase IV [Symbiobacterium thermophilum IAM 14863] gi|51857619|dbj|BAD41777.1| putative proteinase IV [Symbiobacterium thermophilum IAM 14863] Length = 312 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 1/187 (0%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVIT 101 + G S+ +++ ++R + D + A+++ ++SPGGS A I A+++V++ KPV+ Sbjct: 64 LSGAGAGSETIVKHLDRAAEDPAVKAVVLRVNSPGGSVVASWEIAEAVRRVQDAGKPVVV 123 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + E AAS GY IS ++ I+A+ ++ GSIGV+ Q + +K+G + KS P K Sbjct: 124 SMGESAASGGYWISAGADRIIASPDTMTGSIGVILQVGNLSEVYEKVGYKTYTFKSGPFK 183 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 SP E+ ++QD+VD +Y FV +V+E R + + ++DGRI TG +A ++ Sbjct: 184 DMGSPDREMTDAERDLLQDLVDETYEAFVPVVAEGRGMDEAQVRKIADGRILTGRKALEL 243 Query: 222 GLIDVVG 228 GL+D +G Sbjct: 244 GLVDELG 250 >gi|167629015|ref|YP_001679514.1| signal peptide peptidase sppa, 36k type [Heliobacterium modesticaldum Ice1] gi|167591755|gb|ABZ83503.1| signal peptide peptidase sppa, 36k type [Heliobacterium modesticaldum Ice1] Length = 310 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 109/178 (61%), Gaps = 1/178 (0%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASA 110 +++E + R+ +D A+++ ++SPGG++ A + I R + +++ + K V+ + ++AAS Sbjct: 70 QVLEALRRLQQDKQIKAVVLRINSPGGTSAASQEIGREVDRLRESGKVVVASMGDVAASG 129 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++ ++ IVA + GSIGV+ + K+G +KS P K S E+ Sbjct: 130 GYWVAARADKIVANAATTTGSIGVILDLANLTELYQKIGYRPNVIKSGPYKDIASSAREM 189 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+ ++Q +VD Y F+ +V+E R++P+++ L+DGR++TG +AK++GL+D +G Sbjct: 190 TPEERAILQGMVDDIYQQFIDVVAEGRHMPHEQVRALADGRVFTGRQAKELGLVDELG 247 >gi|123968906|ref|YP_001009764.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. AS9601] gi|123199016|gb|ABM70657.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. AS9601] Length = 269 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 105/178 (58%), Gaps = 2/178 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNII 121 D ALIV + SPGG+ + I+ AI+++K++ VI ++AS G I AS+ I Sbjct: 39 DREFPALIVRIDSPGGTVGDSQEIYSAIKRLKDKGCKVIASFGNISASGGVYIGVASDKI 98 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++ GSIGV+ + + LDK+G+ ++VKS K SP ++ + ++Q + Sbjct: 99 VANPGTITGSIGVIIRGNNLSELLDKIGIKFETVKSGVFKDILSPDKPLSEEGRGLLQGL 158 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +D SY F V+E RN+P ++ +DGRI+TG +AK++GL+D + G E V + L A Sbjct: 159 IDESYKQFTEAVAEGRNLPVEEVRKFADGRIFTGTQAKELGLVDKI-GDEFVARELAA 215 >gi|24216571|ref|NP_714052.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|24197892|gb|AAN51070.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] Length = 317 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 39 ARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 A I I G+I S+ +++++ I ++ + +++ ++SPGG+ A + ++ Sbjct: 52 ALIKIEGEIHSGHSTFESTGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNE 111 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + +++ + ++ + +MAAS GY I+ A++ I A ++ GSIGV+ P +K LD+ G Sbjct: 112 LMRLRKTRKIVVSMKDMAASGGYYIASAADKIFALSGTITGSIGVIAMAPNIKGLLDRYG 171 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V +++ K K S F + P+ +M+Q ++ +Y+ F++ V++ RN L++ Sbjct: 172 VKMRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFIQDVAKGRNQTVKSVQNLAE 231 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G+I++G +A + L+D +GG++E + L L Sbjct: 232 GKIYSGQDAFRNKLVDEIGGRKEALEELSRL 262 >gi|302037855|ref|YP_003798177.1| putative signal peptide peptidase SppA [Candidatus Nitrospira defluvii] gi|300605919|emb|CBK42252.1| putative Signal peptide peptidase SppA [Candidatus Nitrospira defluvii] Length = 358 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 108/184 (58%), Gaps = 3/184 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E +ER ++D+ A+++ ++SPGG+ A + I+ ++ K + P++ + ++ AS GY Sbjct: 113 EELERATKDERIKAIVLRINSPGGTVTASDIIYHELKSFKTSRKIPIVASIMDVGASGGY 172 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ + A +++ GSIGV+ + L+K+GV +V S P K SPF + P Sbjct: 173 YIAAAADTVFAHPSTVTGSIGVIMLTVNARGLLEKVGVETNAVTSGPRKDMGSPFRAMLP 232 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + Q V+D Y F+++V + R N+ + L+DGRI++G +AK GL+D +G E Sbjct: 233 EERAIFQGVIDGFYQRFLQVVQDGRPNMNGETIRKLADGRIYSGEQAKAAGLVDDIGYLE 292 Query: 232 EVWQ 235 + + Sbjct: 293 DAIE 296 >gi|239828047|ref|YP_002950671.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. WCH70] gi|239808340|gb|ACS25405.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. WCH70] Length = 336 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 105/182 (57%), Gaps = 2/182 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEM 106 D Q + IE+ DD+ A+++ ++SPGG I + ++K +KP+ + M Sbjct: 87 DHQSFLRMIEQAKNDDTVKAIVLRVNSPGGGVVESAEIHDQLLELKKETKKPIYVSMGSM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS A + I A+ ++ GS+GV+ Q + K GV + ++KS P K +P Sbjct: 147 AASGGYYISTAGDKIFASPETITGSLGVIMQSLNYEGLAKKYGVELVTIKSGPYKDIMNP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ + +++Q ++ +SY FV+++SE R++P + ++DGRI+ G +AK++ LID Sbjct: 207 ARKMTEEEKEILQQLIRNSYEGFVKVISEGRHLPESEVRKIADGRIYDGRQAKQLKLIDE 266 Query: 227 VG 228 G Sbjct: 267 FG 268 >gi|319897159|ref|YP_004135354.1| protease iv (signal peptide peptidase) [Haemophilus influenzae F3031] gi|317432663|emb|CBY81026.1| protease IV (signal peptide peptidase) [Haemophilus influenzae F3031] Length = 616 Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 15/255 (5%) Query: 32 EDNSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAY 81 +DNSP+ +A + + G I D + + I RI R ++DD S A+++ ++SPGGSA+ Sbjct: 318 QDNSPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAQDDNSVKAVVLRVNSPGGSAF 377 Query: 82 AGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P Sbjct: 378 ASEMIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPT 437 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + K+GV+ V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 438 FENSIKKIGVNADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLS 496 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + L+ G++W G++A + L+D +G E L + ++D++ WF Sbjct: 497 KTQVDKLAQGQVWLGSDAFQNDLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WF 553 Query: 261 CDLKNLSISSLLEDT 275 D IS+LL DT Sbjct: 554 TDDNVSLISTLLRDT 568 >gi|329121217|ref|ZP_08249844.1| signal peptide peptidase [Dialister micraerophilus DSM 19965] gi|327470151|gb|EGF15614.1| signal peptide peptidase [Dialister micraerophilus DSM 19965] Length = 322 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 1/180 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S++++ + +RD +A A+++ ++SPGG+ A + I I KV+N KPVI + + A Sbjct: 77 SEDIMYELREATRDPNAKAVLLRINSPGGTTGATQEIAEEIDKVRNSGKPVIVSMGDTCA 136 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SAGY ++ + I A+ ++ GSIGV Y V +DKLGV + +KS K S + Sbjct: 137 SAGYWLASKGDYIFASPATITGSIGVYMDYTNVSELMDKLGVKNEKIKSGTHKDILSMYR 196 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + ++Q +VD Y+ FV+ +++ R++ K ++DGRI TG +A+ GL+D +G Sbjct: 197 PITDEEKTILQKMVDDIYNQFVQTIADGRHLEEAKVREIADGRILTGKQAQAYGLVDAMG 256 >gi|304570504|ref|YP_003004.2| PfaP [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 290 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 120/212 (56%), Gaps = 9/212 (4%) Query: 38 VARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 A I I G+I S+ +++++ I ++ + +++ ++SPGG+ A + ++ Sbjct: 24 AALIKIEGEIHSGHSTFESTGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYN 83 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ + ++ + +MAAS GY I+ A++ I A ++ GSIGV+ P +K LD+ Sbjct: 84 ELMRLRKTRKIVVSMKDMAASGGYYIASAADKIFALSGTITGSIGVIAMAPNIKGLLDRY 143 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV +++ K K S F + P+ +M+Q ++ +Y+ F++ V++ RN L+ Sbjct: 144 GVKMRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFIQDVAKGRNQTVKSVQNLA 203 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +G+I++G +A + L+D +GG++E + L L Sbjct: 204 EGKIYSGQDAFRNKLVDEIGGRKEALEELSRL 235 >gi|329123556|ref|ZP_08252118.1| signal peptide peptidase SppA [Haemophilus aegyptius ATCC 11116] gi|327470298|gb|EGF15758.1| signal peptide peptidase SppA [Haemophilus aegyptius ATCC 11116] Length = 616 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 15/255 (5%) Query: 32 EDNSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAY 81 +DNSP+ +A + + G I D + + I RI R ++DD S A+++ ++SPGGSA+ Sbjct: 318 QDNSPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAQDDNSVKAVVLRVNSPGGSAF 377 Query: 82 AGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P Sbjct: 378 ASEMIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPT 437 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + K+GV+ V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 438 FENSIKKIGVNADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLS 496 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + L+ G++W G++A + L+D +G E L + ++D++ WF Sbjct: 497 KTQVDKLAQGQVWLGSDAFQNDLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WF 553 Query: 261 CDLKNLSISSLLEDT 275 D IS+LL DT Sbjct: 554 TDDNVSLISTLLRDT 568 >gi|254527035|ref|ZP_05139087.1| signal peptide peptidase SppA, 36K type [Prochlorococcus marinus str. MIT 9202] gi|221538459|gb|EEE40912.1| signal peptide peptidase SppA, 36K type [Prochlorococcus marinus str. MIT 9202] Length = 269 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 37 HVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I I S + ++ +++I D ALIV + SPGG+ + I+ AI+++K Sbjct: 12 RMARIVIDEPITSSTRVSVLKALKQIE-DREFPALIVRIDSPGGTVGDSQEIYSAIKRLK 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 ++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G+ + Sbjct: 71 DKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIGIKFE 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP ++ + ++Q ++D SY F V+E RN+P + +DGRI+ Sbjct: 131 TVKSGVFKDILSPDKPLSEEGRDLLQGLIDESYKQFTEAVAEGRNLPVEDVRKFADGRIF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA 239 TG +AK +GL+D + G E V + L A Sbjct: 191 TGTQAKDLGLVDEI-GDEFVARELAA 215 >gi|327404497|ref|YP_004345335.1| signal peptide peptidase SppA, 67K type [Fluviicola taffensis DSM 16823] gi|327320005|gb|AEA44497.1| signal peptide peptidase SppA, 67K type [Fluviicola taffensis DSM 16823] Length = 592 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 2/190 (1%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 I + G S E+ + + DD ++ ++SPGGSA A E I+R + +K VI Sbjct: 321 ITVDGDEMTSDEICKYFREVRNDDDIKVVVFRVNSPGGSALASEEIWREVSLTTKKKKVI 380 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSP 159 + ++AAS GY ++ ++ I A T++ GSIGV PY F+ +KLG++ V+++ Sbjct: 381 VSMGDVAASGGYYVATPASTIFAEPTTITGSIGVFGVIPYTGGFMENKLGLTFDRVQTNK 440 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 S +++P+ + ++Q VD Y F + V++ R + D+ ++ GR+WTGA+A Sbjct: 441 HSV-LSTNRKLSPEELTLIQGEVDQIYLQFKKRVADGRGLKIDQVHRIARGRVWTGADAL 499 Query: 220 KVGLIDVVGG 229 K+GL+D +GG Sbjct: 500 KIGLVDKLGG 509 >gi|313892633|ref|ZP_07826220.1| signal peptide peptidase SppA, 36K type [Dialister microaerophilus UPII 345-E] gi|313119030|gb|EFR42235.1| signal peptide peptidase SppA, 36K type [Dialister microaerophilus UPII 345-E] Length = 316 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 1/180 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S++++ + +RD +A A+++ ++SPGG+ A + I I KV+N KPVI + + A Sbjct: 71 SEDIMYELREATRDPNAKAVLLRINSPGGTTGATQEIAEEIDKVRNSGKPVIVSMGDTCA 130 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SAGY ++ + I A+ ++ GSIGV Y V +DKLGV + +KS K S + Sbjct: 131 SAGYWLASKGDYIFASPATITGSIGVYMDYTNVSELMDKLGVKNEKIKSGTHKDILSMYR 190 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + ++Q +VD Y+ FV+ +++ R++ K ++DGRI TG +A+ GL+D +G Sbjct: 191 PITDEEKTILQKMVDDIYNQFVQTIADGRHLEEAKVREIADGRILTGKQAQAYGLVDAMG 250 >gi|302345567|ref|YP_003813920.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica ATCC 25845] gi|302149332|gb|ADK95594.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica ATCC 25845] Length = 592 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ V+ V + +G D+Q + + +E +++D A++V ++S GGSAYA Sbjct: 308 VYYAYGDIVD---GVVGGLFSQGHQIDAQVVCKDLEELAKDKDVKAVVVRVNSGGGSAYA 364 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+ I ++K KPV+ + MAAS GY +S +N IVA T++ GSIG+ +P V Sbjct: 365 SEQIWHQIMELKKLKPVVVSMGGMAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPDVS 424 Query: 143 PFL-DKLGVSIKSVKSSP---MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 L +KLG+ VK++ PF+E + + + V+ Y F V+E R Sbjct: 425 GLLREKLGLKFDEVKTNKYADFGTRARPFTE---EEMSYLSQYVNRGYKLFRHRVAEGRK 481 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + ++ G ++TG +A+K+GL+D +GG Sbjct: 482 MTEKQVEKVAQGHVFTGQDAQKIGLVDQLGG 512 >gi|295698349|ref|YP_003603004.1| signal peptide peptidase SppA, 67K type [Candidatus Riesia pediculicola USDA] gi|291157055|gb|ADD79500.1| signal peptide peptidase SppA, 67K type [Candidatus Riesia pediculicola USDA] Length = 634 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 130/243 (53%), Gaps = 16/243 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHE 105 I +S+ ++++I + D + +LI+ ++SPGG+ E I A++ KN+K V+ + Sbjct: 362 IANSENIVKKIRQAESDPNIRSLILRINSPGGTVSDSEKIRNALKSFRKNKKFVVVSMGG 421 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 MA S GY IS S+ I+A +T++ GSIGV + L+ +G+ + ++P+ P Sbjct: 422 MATSGGYWISTESDRIIADQTTITGSIGVFGVVNTFESSLEDIGIRCDGISTTPLSQGPI 481 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ +NP ++++ VD +Y F++ VS SR +++GRIW G+EA KVGLID Sbjct: 482 EYTGINPYLSEILKISVDHNYEKFLKYVSLSRKKNIQDVRTIANGRIWIGSEAFKVGLID 541 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 +G ++ ++ KI + P W S +SL+E+ I L + ++ Sbjct: 542 QLGDFDDAIEAAM---------KISNIEHPSLEWM-----FSDTSLMENLIDLF-SSNIK 586 Query: 286 GLW 288 L+ Sbjct: 587 NLF 589 >gi|332703631|ref|ZP_08423719.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] gi|332553780|gb|EGJ50824.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] Length = 322 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 15/208 (7%) Query: 36 PHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 P V I +RG +E QE + ++++ + D S AL++++ SPGG+A A Sbjct: 43 PKVVLITVRGTLETGPDEETFREAPGIVQETVSQLDKAAADPSVKALVLAVDSPGGTATA 102 Query: 83 GEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++ + K K + ++ + E+AAS GY IS +++IVA T++ GS+G +F P Sbjct: 103 SDILYGELLAWKEKTKAKLVVCMLEVAASGGYYISLPADVIVAHPTTITGSVGTIFIRPK 162 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V +DK+GV + KS K SPF + + + V+M +V F+ LV++ RN+ Sbjct: 163 VVGLMDKIGVDVDVTKSGVNKDMGSPFRQPSREEVEMFDGIVGDMNSRFLSLVAKHRNLS 222 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +S R++T +A+KVGL+D +G Sbjct: 223 DENMRQVSTARVFTANQARKVGLVDEIG 250 >gi|157413729|ref|YP_001484595.1| signal peptide peptidase SppA [Prochlorococcus marinus str. MIT 9215] gi|157388304|gb|ABV51009.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9215] Length = 269 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 37 HVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I I S + ++ +++I D ALIV + SPGG+ + I+ AI+++K Sbjct: 12 RMARIVIDEPITSSTRVSVLKALKQIE-DREFPALIVRIDSPGGTVGDSQEIYSAIKRLK 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 ++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G+ + Sbjct: 71 DKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIGIKFE 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP ++ + ++Q ++D SY F V+E RN+P + +DGRI+ Sbjct: 131 TVKSGVFKDILSPDKPLSDEGRDLLQGLIDESYKQFTEAVAEGRNLPVEDVRKFADGRIF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA 239 TG +AK +GL+D + G E V + L A Sbjct: 191 TGTQAKDLGLVDEI-GDEFVARELAA 215 >gi|258645667|ref|ZP_05733136.1| signal peptide peptidase SppA [Dialister invisus DSM 15470] gi|260403034|gb|EEW96581.1| signal peptide peptidase SppA [Dialister invisus DSM 15470] Length = 315 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 110/194 (56%), Gaps = 3/194 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S++++ +E+ +D+ +++ ++SPGGS A + I + K+KN KP++ + +M A Sbjct: 69 SEQVMYEMEQARKDNRVKGVLLRINSPGGSTGATQEIAEEMDKIKNAGKPIVVSMGDMCA 128 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SAGY ++ + + A +L GSIGV Y V+ +DKLGV + +KS K S + Sbjct: 129 SAGYWLASKGDYVFANPATLTGSIGVYMDYTNVEELMDKLGVKNEKIKSGAHKDILSMYR 188 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +M+Q +VD Y FV+ V++ R + + ++DGRI TG +A ++GL+D +G Sbjct: 189 PMTGDEQKMLQTMVDDIYSQFVKTVADGRRMEESRVRSVADGRILTGQQAMELGLVDAMG 248 Query: 229 GQEEVWQSLYALGV 242 + YA GV Sbjct: 249 NYYDALN--YAGGV 260 >gi|254423418|ref|ZP_05037136.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7335] gi|196190907|gb|EDX85871.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7335] Length = 286 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I S + ++E ++ + + AL++ + SPGG+ + I+ A++K++ Sbjct: 12 QIARIEISGAIAGSTRKRVLEALKEVE-EKKFPALLLRIDSPGGTVGDSQEIYSALRKLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I ++ IVA + GSIGV+ + ++ LDK+GVS K Sbjct: 71 EKVKIVASYGNISASGGVYIGVGAHHIVANAGCITGSIGVILRGNNIEKLLDKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS P K + + + ++Q+++D SY FVR V+E RN+P K +DGR++T Sbjct: 131 VKSGPYKDILAFDRPLTSEEETILQELIDVSYGQFVRTVAEGRNLPEAKVREFADGRVFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A +G++D +G +E+ Sbjct: 191 GEQALALGMVDRLGSEED 208 >gi|218258308|ref|ZP_03474710.1| hypothetical protein PRABACTJOHN_00365 [Parabacteroides johnsonii DSM 18315] gi|218225548|gb|EEC98198.1| hypothetical protein PRABACTJOHN_00365 [Parabacteroides johnsonii DSM 18315] Length = 522 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 107/186 (57%), Gaps = 6/186 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+E+ ++ ++ DD A++ ++SPGGSAY E I++ + ++K +KP++ + AAS Sbjct: 332 SEEMANKLRKLKDDDDVKAVVFRVNSPGGSAYISEQIWKEVVELKAKKPIVVSMGNYAAS 391 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS---SPMKAEPSP 166 GY ISCA+N IVA T+L GSIGV DK+GV+ VK+ + + P Sbjct: 392 GGYYISCAANKIVAERTTLTGSIGVFGVVRNFTGTFDKVGVTTDVVKTNTFADLGDMSRP 451 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E + KA ++Q V+ +Y F+ ++ R + + + GR+WTG +A + GL+D Sbjct: 452 MRE-DEKA--LIQRGVEQTYDLFLTRCADGRGMTKAEIDSIGQGRVWTGEQALERGLVDQ 508 Query: 227 VGGQEE 232 +GG ++ Sbjct: 509 LGGMDD 514 >gi|116873014|ref|YP_849795.1| protease/peptidase protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741892|emb|CAK21016.1| protease/peptidase protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 338 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 126/225 (56%), Gaps = 19/225 (8%) Query: 31 VEDNSPH-VARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +ED P+ +A +++ G I+D+ E ++++E++ D+S +++ ++S Sbjct: 56 IEDAGPNKIAVLSVDGTIQDTGETSSIFGSEGYNHSFFMDQLEQVRDDESIKGVLLYVNS 115 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I +++ + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 116 PGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 175 Query: 134 VLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ Q Y Y + KLG+S ++KS K S + + ++MQ ++D SY+ FV++ Sbjct: 176 VIMQGYDY-SELMKKLGISDNTIKSGAHKDIMSATRPMTEEEKKIMQSMIDDSYNEFVKV 234 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R++ ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 235 VASGRDMSEEQVRKIADGRIYDGRQAKENGLIDAFGYQEDALEAL 279 >gi|282877202|ref|ZP_06286040.1| signal peptide peptidase SppA, 67K type [Prevotella buccalis ATCC 35310] gi|281300694|gb|EFA93025.1| signal peptide peptidase SppA, 67K type [Prevotella buccalis ATCC 35310] Length = 589 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 115/208 (55%), Gaps = 3/208 (1%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ S V DN + I S E+ + +E ++ DD A+++ ++S GGSAYA Sbjct: 304 VYYAYGSIV-DNPVTGSMFGAEHMIVGS-EVCKDLEALAEDDDVKAVVLRINSGGGSAYA 361 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E ++ ++++K +KPV+ + +MAAS GY + C +N IVA T+L GSIG+ P + Sbjct: 362 SEQMWNQVEQLKKKKPVVVSMGDMAASGGYYMGCNANWIVAQPTTLTGSIGIFAMIPDMS 421 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L KLG+ VK++ S +N + + + +D Y F + V++ R + Sbjct: 422 QLLTQKLGIKFDEVKTNKNSTFGSSARPLNAEEIGYLARYIDRGYALFRQRVADGRKLSV 481 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ ++ G ++ G +A K+ L+D +GG Sbjct: 482 NQVEAIAQGHVFVGRDALKIKLVDELGG 509 >gi|163753142|ref|ZP_02160266.1| protease IV [Kordia algicida OT-1] gi|161326874|gb|EDP98199.1| protease IV [Kordia algicida OT-1] Length = 589 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 121/227 (53%), Gaps = 16/227 (7%) Query: 25 FSWSSHVEDNSPHVAR-------IAIRGQI---EDSQELIER------IERISRDDSATA 68 + ++ + D P V + I +GQI E ++ I + ++ D++ A Sbjct: 286 YDYAEYTADKKPTVKKSDEKIAVIYAQGQIMYAEGNENFIGQGVINKALKEAREDENVKA 345 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ ++SPGGSA A E I+R I+ K KPVI + ++AAS GY I+C ++ I A ++ Sbjct: 346 IVLRVNSPGGSALASELIWREIELTKKEKPVIVSMGDLAASGGYYIACNADKIYAEPNTI 405 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV P + + LG++ + V ++ + S F ++ + ++++ ++ Y Sbjct: 406 TGSIGVFGTIPNMHKLAEDLGINAEQVGTNKNAVDYSIFEPMSDEQRALIKEGIEDIYDL 465 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 F + V++ R + + + GR+WTG +A K+GL+D +GG + Q Sbjct: 466 FTQRVADGRGMTQEAVDEIGQGRVWTGNDAIKIGLVDEIGGLDMALQ 512 >gi|134045563|ref|YP_001097049.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C5] gi|132663188|gb|ABO34834.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Methanococcus maripaludis C5] Length = 307 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 112/181 (61%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + IE I+ +D + A+I+ ++SPGG A E + R I++ K VI + M SA Sbjct: 64 DYIEWIDDAEKDSNIKAIIIKINSPGGEVIASEKLSRKIKEASEEKVVIAYIETMGTSAA 123 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y + +++ IVA +LVG+IGV + + ++KLGV+ ++KS K SP + Sbjct: 124 YQAASSTDYIVAERQALVGNIGVRMEIIHYYGLMEKLGVNATTIKSGIYKDIGSPTRPMT 183 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + +M++ +VD SY+ FV V+E+RN+ ++TL ++DG+I++G +AK+VGL+D+ G +E Sbjct: 184 EEEQRMLESIVDESYYEFVSWVAENRNMTINETLRVADGKIYSGVQAKRVGLVDMTGTEE 243 Query: 232 E 232 + Sbjct: 244 D 244 >gi|254410663|ref|ZP_05024442.1| signal peptide peptidase SppA, 67K type [Microcoleus chthonoplastes PCC 7420] gi|196182869|gb|EDX77854.1| signal peptide peptidase SppA, 67K type [Microcoleus chthonoplastes PCC 7420] Length = 593 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 123/229 (53%), Gaps = 22/229 (9%) Query: 23 VYFSWSSHVEDNSPH-------VARIAIRGQIEDSQELIERI---------ERISRDDSA 66 V+ S + + D H +A + G+I D + ++ + ++ DDS Sbjct: 286 VHLSTYADIADKPEHQRASKNKIAVLYASGEIVDGEGSVQEVGGESFAAQMRKLRLDDSV 345 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ ++SPGGSA A E I R ++ ++ KPVI + ++AAS GY IS N I A Sbjct: 346 KAVVLRVNSPGGSATASEIIQREVKLTRDSKPVIISMGDIAASGGYWISTYGNRIFAEPN 405 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ---MMQDVVD 183 ++ GSIGV V+ ++ G++ VK+ A+ S PK Q ++Q +VD Sbjct: 406 TVTGSIGVFGLLMNVQQIANENGITWDVVKTGRF-ADTQTVS--RPKTTQELALIQKIVD 462 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Y F+ V+ESR +P DK ++ GR+W+G +AK++GL+D +GG ++ Sbjct: 463 QVYSKFLDKVAESRKLPKDKVAQIAQGRVWSGIDAKQLGLVDEIGGLDD 511 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 17/236 (7%) Query: 21 TVVYFSWSSHVEDNSP-----HVARIAIRGQIEDS---QELIERIERISRDDSATALIVS 72 +V+ F S V D P A+ G+ D+ +++I+ + + D AL + Sbjct: 39 SVLVFDLSLTVRDTDPTSSTSRAIEEALSGEETDTITLRKVIDTLNTAAEDSRIVALYLD 98 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR-----KPVITEVHEMAASAGYLISCASNIIVAAETS 127 S S+ G A + +++ R K +I + YL S A I++ S Sbjct: 99 GSQTSTSSGTGFATLKEVREALERFKESGKKIIAYDVDSGEGEYYLSSIADTIVLNPMGS 158 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSS 185 L + G Q + L+K G+ I+ ++ K+ PF E++ + Q MQ ++ Sbjct: 159 LEMN-GFSSQPMFFTGALEKFGIGIQVIRVGKYKSAVEPFVLKELSQENRQQMQALLGDL 217 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + F V +SR + + ++D + I ++A L+D VG +EV L L Sbjct: 218 WTEFRTTVGKSRQVTPQELQAIADTQGIVLASDAIGRRLVDKVGYYDEVIAQLQEL 273 >gi|24214825|ref|NP_712306.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|45657659|ref|YP_001745.1| endopeptidase IV [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195838|gb|AAN49324.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|45600899|gb|AAS70382.1| signal peptide peptidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 328 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 45 GQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVI 100 G EDS E+ +++E D A+I+ ++SPGGS A + I+R I + K +K PV+ Sbjct: 69 GGQEDSILVEVKKQLELAELDPEIKAVILKINSPGGSVTASDIIYREILQFKTKKKIPVV 128 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + + AAS Y IS A+++++A TS+ GSIGV+ VK LDKLG+ +S++S Sbjct: 129 SLFMDTAASGAYYISMATDLLIAHPTSVTGSIGVILSGINVKEGLDKLGIKDQSIRSGGN 188 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAK 219 K SP E++P+ +++Q +VD + F +V + R L ++DGRI+T ++A Sbjct: 189 KTIGSPLEELSPEQRKLLQSIVDDLFEKFFDIVKKGRPGKNPSELRKVADGRIFTASQAL 248 Query: 220 KVGLIDVVGGQEEVWQSLYAL 240 + GLID +G + Q AL Sbjct: 249 QHGLIDKIGYFDNAVQETMAL 269 >gi|300866223|ref|ZP_07110935.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] gi|300335742|emb|CBN56095.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] Length = 272 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 130/226 (57%), Gaps = 6/226 (2%) Query: 37 HVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I E + ++E ++ + + AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEINGAIAQEARKRVLEALKTVE-ERKFPALLLRIDSPGGTVGDSQEIYSALKRLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 ++ ++ ++AS G I + IV ++ GSIGV+ + ++ L+K+GVS K+ Sbjct: 71 DQVKIVASFGNISASGGVYIGMGAPHIVTNPGTITGSIGVIIRGNNIEGLLEKVGVSFKT 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K + E+ +++QD++D++Y FV+ V+E+RNIP + +DGRI++ Sbjct: 131 IKSGPYKDILAFDRELTEPEKEILQDLIDNTYQQFVQTVAEARNIPIETVKTFADGRIFS 190 Query: 215 GAEAKKVGLIDVVGGQEEV--WQSLYALGVDQSIRKIKDWNPPKNY 258 G +A ++G++D +G +++ W + A G+D + PK + Sbjct: 191 GQQALELGVVDRLGTEDDARRWAAELA-GLDPEKTECCTLEKPKPF 235 >gi|322513703|ref|ZP_08066797.1| signal peptide peptidase SppA [Actinobacillus ureae ATCC 25976] gi|322120487|gb|EFX92397.1| signal peptide peptidase SppA [Actinobacillus ureae ATCC 25976] Length = 618 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 139/268 (51%), Gaps = 21/268 (7%) Query: 24 YFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSATAL 69 YF ++ + D +A I + GQI S +++++ + D + + Sbjct: 307 YFDYAHGLTDRFHVKAENKIAIINVEGQIVSGKSSQNSAGSDTIVKQLRKAREDKNVRGV 366 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++SPGGSA A E I + ++ ++ KPV+T + MAAS GY IS S+ I+A+ T++ Sbjct: 367 ILRVNSPGGSAMASEIIRQELEAIQLAGKPVVTSMGGMAASGGYWISATSDKIIASPTTI 426 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ + LGV+ + SP A SP + + +++Q +++ Y Sbjct: 427 TGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENGYDR 485 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F+ LVS RNIP ++ G++W+G +A K GL+D +G + + + L V+Q RK Sbjct: 486 FLELVSRGRNIPKQAVDKIAQGQVWSGEDALKHGLVDELGDFDTAYDVITEL-VNQQ-RK 543 Query: 249 IKDWNPPKNY---WFCDLKNLSISSLLE 273 +K +++ WF D + +SS L+ Sbjct: 544 VKGEAAIEHFRAQWFIDSDDSLLSSFLK 571 >gi|304382981|ref|ZP_07365462.1| signal peptide peptidase SppA [Prevotella marshii DSM 16973] gi|304335900|gb|EFM02149.1| signal peptide peptidase SppA [Prevotella marshii DSM 16973] Length = 591 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 9/189 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +Q++ + ++ + DD A+++ ++S GGS+YA E ++ I ++K +KPV+ + AAS Sbjct: 329 AQDVCKDLKELMEDDDVKAVVIRVNSHGGSSYASEQLWHQITELKKKKPVVVSMGGYAAS 388 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA-----E 163 GY +SC ++ IVA T+L GSIG+ +P + L +KLGV VK++ A Sbjct: 389 GGYYMSCGADWIVAQPTTLTGSIGIFGAFPDMSGLLTEKLGVRFDEVKTNRNSAFSFIRT 448 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 PF N + ++Q V+ Y F + V++ R + ++ G +WTG +A ++GL Sbjct: 449 AHPF---NAEETALLQAYVNRGYTLFRKRVADGRKRSVEAIENMAQGHVWTGRDALRIGL 505 Query: 224 IDVVGGQEE 232 +D +GG +E Sbjct: 506 VDQLGGLDE 514 >gi|115379446|ref|ZP_01466546.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|310821059|ref|YP_003953417.1| peptidase s49, protease iv [Stigmatella aurantiaca DW4/3-1] gi|115363555|gb|EAU62690.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|309394131|gb|ADO71590.1| Peptidase S49, protease IV [Stigmatella aurantiaca DW4/3-1] Length = 592 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 6/195 (3%) Query: 43 IRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + G+ SQ +RI R R D+ A+++ ++SPGGSA A + I R + + KP Sbjct: 319 VNGEGRPSQTGGDRISRELRKLRLDEDVKAVVLRVNSPGGSASASDLIQREVIVTRKVKP 378 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ + AAS GY IS + I A T++ GSIGV P V+ + G++ SV+++ Sbjct: 379 VVISMGSYAASGGYWISTYGDRIFAQPTTITGSIGVFGMLPNVQKLANTHGITFDSVQTA 438 Query: 159 PMKAEPSPFSEVNPKA-VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 M A P+ + +A + +Q +VD Y F+ V+E R +P ++ ++ GR+W+G E Sbjct: 439 KM-ANPATLARPKTEAELARIQHMVDRIYEQFLSKVAEGRKLPRERVHEIAQGRVWSGEE 497 Query: 218 AKKVGLIDVVGGQEE 232 A+K+GL+D VGG ++ Sbjct: 498 ARKLGLVDEVGGLQD 512 >gi|154489868|ref|ZP_02030129.1| hypothetical protein PARMER_00097 [Parabacteroides merdae ATCC 43184] gi|154089310|gb|EDN88354.1| hypothetical protein PARMER_00097 [Parabacteroides merdae ATCC 43184] Length = 591 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 118/218 (54%), Gaps = 17/218 (7%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+E+ ++ ++ DD A++ ++SPGGSAY E I++ + ++K +KP++ + AAS Sbjct: 332 SEEMANKLRKLKDDDDVKAVVFRVNSPGGSAYISEQIWKEVVELKAKKPIVVSMGNYAAS 391 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF---LDKLGVSIKSVKSSPMKAEPSP 166 GY ISCA+N IVA T+L GSIGV + V+ F DK+GV+ VK++ Sbjct: 392 GGYYISCAANKIVAERTTLTGSIGV---FGVVRNFTGTFDKVGVTTDIVKTNTFADLGDI 448 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q V+ +Y F+ ++ R + + + GR+WTG +A + GL+D Sbjct: 449 SRPMREDEKALIQRGVEQTYDLFLTRCADGRGMTKAEIDSIGQGRVWTGEQALERGLVDQ 508 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDW-----NPPKNYW 259 +GG ++ + L ++ D+ + PK+++ Sbjct: 509 LGGMDDAIKEAATLA------ELTDYSVIVADGPKDFF 540 >gi|325104824|ref|YP_004274478.1| signal peptide peptidase SppA, 67K type [Pedobacter saltans DSM 12145] gi|324973672|gb|ADY52656.1| signal peptide peptidase SppA, 67K type [Pedobacter saltans DSM 12145] Length = 586 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 22/247 (8%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFS-WSSHVEDNSPHVARIAI---RGQIEDSQ-------- 51 VL ++K++ + L V S ++++V+ + RIA+ G+I + Sbjct: 268 VLDELKSKTGIDKKKNLNTVSLSDYANNVKPENTSSNRIAVIYANGEINSGEGDQNTIGS 327 Query: 52 ELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 E I R R +R DD A+++ ++SPGGS+ A + I+R K KP I + + AAS Sbjct: 328 EGISRAIRKARLDDKVKAIVLRVNSPGGSSLASDVIWRETVLAKKEKPFIVSMGDYAASG 387 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSE 169 GY ISCA++ I A ++ GSIGV P +KPFL +KLG++ VK+ E + F + Sbjct: 388 GYYISCAADSIFAEPNTITGSIGVFAILPNLKPFLNNKLGITFDGVKT----GEFADFGQ 443 Query: 170 V----NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 V +++Q V+ Y F + V+E R I + GR+WTG +A +GL+D Sbjct: 444 VTRPLTSAEKELLQQEVNKIYFDFTKRVAEGRKISQSYVDSIGQGRVWTGKQAIDLGLVD 503 Query: 226 VVGGQEE 232 +G E+ Sbjct: 504 KIGHIED 510 >gi|237746014|ref|ZP_04576494.1| peptidase U7 family [Oxalobacter formigenes HOxBLS] gi|229377365|gb|EEO27456.1| peptidase U7 family [Oxalobacter formigenes HOxBLS] Length = 315 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 10/239 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIE-----DSQELIERI 57 + K+ T ++++ L+ ++V FS+S PH A I IRG IE + +I+ + Sbjct: 30 IFFKLVTLFLIIFLI-VSVRNFSFSEGEGAPVQPHTAVIEIRGTIEATGNASASNIIKAL 88 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLI 114 +R ++ AT +I+ ++SPGGS I+ I++++N KP+ V E+ AS GY I Sbjct: 89 DRAYKEPMATGVILKINSPGGSPVQAGMIYDEIRRLRNTYPDKPLYVVVEELCASGGYYI 148 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I + S+VGSIGV+ V +DKLG+ + + + K PFS P+ Sbjct: 149 AAAADKIYVDKASIVGSIGVMINGFGVTGLMDKLGIERRLLTAGEYKGFLDPFSPQTPQQ 208 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +Q Q +++ + F+ +V E R + + G ++ G EA K+GL D +G E V Sbjct: 209 IQYAQSMLNQIHQQFIEVVREGRGNRLKENREIYSGLVFLGPEAIKLGLADDLGTVESV 267 >gi|220905589|ref|YP_002480901.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869888|gb|ACL50223.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 383 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 111/196 (56%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +A +++ G I + + +E + ++R+ S ++V + SPGG A A + ++ A++ + + Sbjct: 114 RIALVSVTGPIMNVEPTLEWLRTVARNPSVKGVLVRVDSPGGGAAASQEVYDALKNLAQK 173 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 PV + MAAS G ++S A + A +++ GSIGV P ++ +DK+GV +++ Sbjct: 174 MPVAVSMGSMAASGGLMVSMAGQRVFANPSTVTGSIGVRMDVPQLQGLMDKVGVGQETLV 233 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K S + + Q V+ + Y FV +V++ R +P D+ L L++G+++TG Sbjct: 234 VGQYKDAASYMRPMTAEQRAYFQGVLTNMYDQFVDIVAQGRGMPRDRALKLANGKVYTGQ 293 Query: 217 EAKKVGLIDVVGGQEE 232 EA +GL+D +GG+ + Sbjct: 294 EALGLGLVDELGGRGQ 309 >gi|119511127|ref|ZP_01630245.1| protease IV [Nodularia spumigena CCY9414] gi|119464222|gb|EAW45141.1| protease IV [Nodularia spumigena CCY9414] Length = 611 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 4/191 (2%) Query: 43 IRGQIEDSQELIERIERI----SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + G+ ED Q +R RI D+ A+++ ++SPGGSA A E + R +Q + KP Sbjct: 329 VDGRGEDQQIGGDRFARILNQLRHDNDVKAVVLRINSPGGSATASEIMQREVQLTREVKP 388 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ + ++AAS GY I+ SN I A T++ GSIGV + + G++ +VK++ Sbjct: 389 VVVSMGDIAASGGYWIATDSNRIFAEPTTITGSIGVFGVLLNGQKLANDNGITWDTVKTA 448 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 +P +P+ +++ Q V+ Y+ F+ V + RN+P K ++ GR+W+G A Sbjct: 449 RYADSQTPTRPKSPQELEIYQRSVNRIYNLFLDRVVQGRNLPAPKVAEIAQGRVWSGISA 508 Query: 219 KKVGLIDVVGG 229 K++GL+D +GG Sbjct: 509 KQIGLVDEIGG 519 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 15/262 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARI---AIRGQIEDSQEL---IERIERISRDDSATALIVSLS 74 ++V F S ++ D P + + A+ G L ++ +E+ D + + + Sbjct: 51 SIVVFDLSMNITDTPPGSSELLQQALSGAEAPRMTLRSVLDTLEKARLDPRIVGIYLDAT 110 Query: 75 SPGGSAYAGEA----IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 S G A I +A++K + + + Y +S ++ I L+ Sbjct: 111 GTSASGNMGFASLTEIRQALKKFRESGKKVVAYGVGLSEKDYYLSSVADTITLNPIGLME 170 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHW 188 G+ Q ++ LDK G+ ++ V+ K PF E++P+ Q +Q ++D + Sbjct: 171 VNGLTSQPTFLAGALDKFGIGVQVVRVGKFKGAVEPFILQELSPENRQQIQKLLDDVWGD 230 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQSI 246 + VS SR + + ++D + + T EAK+ GL+D VG +EV L L D++ Sbjct: 231 WRTTVSSSRKMTPQQLQAIADTQALLTATEAKERGLVDQVGYLDEVVNDLKKLTASDETD 290 Query: 247 RKIKDWNPPKNYWFCDLKNLSI 268 R + N +NY K+L + Sbjct: 291 RTFEQIN-LRNYAQVPGKSLGV 311 >gi|302344134|ref|YP_003808663.1| signal peptide peptidase SppA, 36K type [Desulfarculus baarsii DSM 2075] gi|301640747|gb|ADK86069.1| signal peptide peptidase SppA, 36K type [Desulfarculus baarsii DSM 2075] Length = 300 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 103/191 (53%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V + + G I + +I ++ DDS A+++ + SPGG A + IFR + + K Sbjct: 43 VGVVEVSGTITSAAPVIFDLQDFREDDSIKAIVLRVDSPGGGVAASQEIFREVARTAEVK 102 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV+ + E+AAS GY ++ I+A+ ++ GSIGV+ P V KLGV ++ V++ Sbjct: 103 PVVCSMGEVAASGGYYVAAPCTKIMASPGTITGSIGVIASVPDVTDLFGKLGVRMQYVQA 162 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 +K +P ++P M+Q ++D S+ F+ V+ +R + K ++DGR+ G Sbjct: 163 GKLKGAGAPGRPLSPDERDMLQQIIDLSHRQFIDDVASARKLDKAKLRAVADGRVILGEA 222 Query: 218 AKKVGLIDVVG 228 A +GL+D G Sbjct: 223 AVGLGLVDETG 233 >gi|218297242|ref|ZP_03497898.1| signal peptide peptidase SppA, 36K type [Thermus aquaticus Y51MC23] gi|218242435|gb|EED08975.1| signal peptide peptidase SppA, 36K type [Thermus aquaticus Y51MC23] Length = 311 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 118/230 (51%), Gaps = 1/230 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + ++ + D A+++ + SPGG EAI RA++++ KP++ + +AAS Sbjct: 64 EDFLSQVRQAKEDPGIKAVVLEVVSPGGGVTETEAIHRALKELAREKPLVASLGTVAASG 123 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY + A+ I A T++ GSIG + ++ LDKLGV ++ +K K S + Sbjct: 124 GYYAATAAREIFTAPTTITGSIGAISIQSQIQGLLDKLGVEVEVLKEGKFKDMASGLRPL 183 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P+ ++Q + +Y FV+ V+E R +P ++ L+DGRI++GA+A +GL D G Sbjct: 184 TPEEKAVIQGYLREAYELFVKRVAEGRRMPPEEVYRLADGRIYSGAQALALGLADREGYL 243 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 E+ Q L R ++ + PK L + S DT L++ Sbjct: 244 EDAAQRAAELAGLTGFRLVR-YKKPKGLLAELLGDEPPFSFASDTQALLQ 292 >gi|311745841|ref|ZP_07719626.1| signal peptide peptidase SppA, 67K type [Algoriphagus sp. PR1] gi|126576044|gb|EAZ80322.1| signal peptide peptidase SppA, 67K type [Algoriphagus sp. PR1] Length = 588 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 127/240 (52%), Gaps = 10/240 (4%) Query: 35 SPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 S +A I G+I D S + + I + +DD+ A+++ ++SPGGS A E I Sbjct: 305 SNRIAVILAEGEIVDGSVEGAISSDKFAKEIRKARKDDNIKAIVLRVNSPGGSVLASEVI 364 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +R + + K KP+ + E+AAS GY IS ++ IVA ++ GSIG+ + + L+ Sbjct: 365 WREMTEAKKAKPLYVSMGEVAASGGYYISAPADTIVAQPNTITGSIGIFGIWFNAQELLN 424 Query: 147 -KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 KLG++ V++ + +P E+ +++Q V+ Y F+ VSE R + + Sbjct: 425 EKLGITSDVVETGQLSDFMNPTRELTDIERKIVQTNVEKGYETFISRVSEGRGMSAEAVK 484 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ GR+WTG +AK+ GL+DV+G ++ + L A +D S + P + WF + N Sbjct: 485 EVASGRVWTGNQAKERGLVDVLGSLDDTIE-LAAERIDASSDYRVIYYPQQKPWFETIMN 543 >gi|17231505|ref|NP_488053.1| protease IV [Nostoc sp. PCC 7120] gi|17133148|dbj|BAB75712.1| protease IV [Nostoc sp. PCC 7120] Length = 273 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + ++E ++ + + AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIASGTRKRVLEALKTVE-ERKFPALLLRIDSPGGTVGDSQEIYSALKRLR 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 EKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKIGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ ++Q+++D+SY FV+ V+E R++ DK +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTEPEQDILQELIDTSYQQFVQTVAEGRSLAVDKVKSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A ++G++D +G +EE Sbjct: 191 GQQALELGVVDRLGTEEE 208 >gi|260060602|ref|YP_003193682.1| protease IV [Robiginitalea biformata HTCC2501] gi|88784732|gb|EAR15901.1| protease IV [Robiginitalea biformata HTCC2501] Length = 584 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 110/195 (56%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E +++ D+ A+++ ++SPGGSA E I+R I + + KPV+ + ++AAS GY + Sbjct: 327 EVFKKVREDEDIKAVVLRINSPGGSALTSEIIWREIMETRKEKPVVVSLSDVAASGGYYM 386 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A + IV T++ GSIGV P + +K+G++ + V + M + S F + Sbjct: 387 AVAGDRIVTEPTTITGSIGVFATIPNISSLSEKIGINAEQVGTHDMSVDYSFFEPMGDDF 446 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +++++ ++ +Y F++ V++ R I + L+ GR+W+G +A ++GL D +GG E Sbjct: 447 REVVREGIEDTYETFLQRVADGRGISVAQADSLAQGRVWSGTDAVRLGLADALGGMPEAL 506 Query: 235 QSLYALGVDQSIRKI 249 + L +S R + Sbjct: 507 DTAAELAGVESYRTL 521 >gi|315282522|ref|ZP_07870914.1| putative signal peptide peptidase SppA [Listeria marthii FSL S4-120] gi|313613825|gb|EFR87577.1| putative signal peptide peptidase SppA [Listeria marthii FSL S4-120] Length = 337 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGMDTIAVLSVDGTIQDTGDSGSLFGDTGYNHSLFMQQLEQVRNDDLIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I ++K + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIKKERGIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQSYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R++P ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRDMPVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|254828180|ref|ZP_05232867.1| peptidase [Listeria monocytogenes FSL N3-165] gi|258600567|gb|EEW13892.1| peptidase [Listeria monocytogenes FSL N3-165] Length = 337 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++ER+ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLERVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPTDKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|152992629|ref|YP_001358350.1| protease IV [Sulfurovum sp. NBC37-1] gi|151424490|dbj|BAF71993.1| protease IV [Sulfurovum sp. NBC37-1] Length = 284 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 124/236 (52%), Gaps = 4/236 (1%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 ++ I + G I D+ ++++ I++ +DD ++ +++SPGG+ I AI+++K + Sbjct: 41 NLQEIKLTGPIMDADKVLKEIDKARKDDDIKGVLFNVNSPGGAVPPSIEICHAIKELKEK 100 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPVI + AS Y S +N I+A S+VGSIGV+ + P + ++K+GV + VK Sbjct: 101 KPVIAYASGIMASGSYYASIYANKIIANPGSIVGSIGVIMEAPNLHELMEKVGVGTQIVK 160 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K +P E PK + ++ + +Y FV V+++R + + + +D I++ Sbjct: 161 QGEYKEAGTPTREWTPKEREELERLTKDTYELFVSDVAKARGLDVNNSTAYADAHIFSSK 220 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 AKK GLID + + + + AL V + + K KD +F DL SI L Sbjct: 221 RAKKAGLIDEIATKRSAKEQIAALAKVKEPVWKEKD---KLESFFEDLSTKSILKL 273 >gi|260592220|ref|ZP_05857678.1| signal peptide peptidase SppA, 67K type [Prevotella veroralis F0319] gi|260535854|gb|EEX18471.1| signal peptide peptidase SppA, 67K type [Prevotella veroralis F0319] Length = 612 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 10/211 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ V+ + +G D+Q + + +E+++ D A+++ ++S GGSAYA Sbjct: 328 VYYAYGDIVD---GAAGGLFAQGHTIDAQVVCKDLEKLTNDKDVKAVVLRVNSGGGSAYA 384 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+ I ++K KPV+ + MAAS Y IS SN IVA T+L GSIG+ +P Sbjct: 385 SEQIWHQIMELKKLKPVVVSMGGMAASGAYYISAPSNWIVAEPTTLTGSIGIFGMFPDFS 444 Query: 143 PFL-DKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 L +KLG+ VK+ S + PFSE + + + ++ Y F V+E R Sbjct: 445 GLLTEKLGIKFDEVKTNKFSGFGTQSRPFSE---EEMAYLNQYINRGYKLFRHRVAEGRK 501 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ ++ G +++G +A K+GL+D +GG Sbjct: 502 KTDNQIEKIAQGHVYSGQDAMKIGLVDQLGG 532 >gi|145634892|ref|ZP_01790599.1| protease IV [Haemophilus influenzae PittAA] gi|145267758|gb|EDK07755.1| protease IV [Haemophilus influenzae PittAA] Length = 615 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV+ V ++ + A+ S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVNADGVSTTEL-AKTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|119486156|ref|ZP_01620216.1| protease IV [Lyngbya sp. PCC 8106] gi|119456647|gb|EAW37776.1| protease IV [Lyngbya sp. PCC 8106] Length = 273 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI + G I D+++ + + + AL++ + SPGG+ + I+ A++K+++ Sbjct: 12 QIARIEVTGVIASDTRKRVLEALKTIEERKYPALLLRIDSPGGTVADSQEIYSALKKLQD 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K + Sbjct: 72 KLKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVIIRGNNIEGLLDKVGVSFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K + ++ Q++Q+++D+SY FV V+ESRN+ +DGRI+TG Sbjct: 132 KSGPYKDILAFDRQLTDPEKQILQELIDTSYRQFVITVAESRNLEETAVRSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEE 232 +A ++G+ID +G +EE Sbjct: 192 EQALELGVIDRLGTEEE 208 >gi|108804065|ref|YP_644002.1| peptidase S49 [Rubrobacter xylanophilus DSM 9941] gi|108765308|gb|ABG04190.1| peptidase S49 [Rubrobacter xylanophilus DSM 9941] Length = 555 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 3/185 (1%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 RD A+++ + S GG A A + I+R + +++ KPV+ + AAS GY + A++ I Sbjct: 326 RDRRVAAVLLHVESRGGDALASDLIWREVARLRRSKPVVVLMGNFAASGGYYVGVAADRI 385 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA +L GSIGV+ P K +LG+ ++++ A P ++ P ++ ++ Sbjct: 386 VARRNTLTGSIGVVLVRPVAKELYGRLGLRPEALQRGKNAAILDPATDPGPGELEALRRQ 445 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ---SLY 238 ++ +Y F + V E R IP ++ L+ GR+WTG EA++ GL+D GG E + L Sbjct: 446 MEHAYREFRQRVVEGRGIPQERLEGLAGGRVWTGEEARREGLVDATGGFREALRLAGELG 505 Query: 239 ALGVD 243 +GVD Sbjct: 506 GVGVD 510 >gi|323699137|ref|ZP_08111049.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. ND132] gi|323459069|gb|EGB14934.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans ND132] Length = 335 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 6/227 (2%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A+ +R Q QEL+ ++ DD A++V++ SPGG+ A + ++ + K R Sbjct: 71 AQGMLRSQPSAVQELVNNLKLAEADDQVGAVVVAIDSPGGTTTASDVLYHELTAFKQRTG 130 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV+ + ++AAS GY + ++ IVA T++ GS+GV+F P + +DK+GV ++ K Sbjct: 131 KPVVAAMFDVAASGGYYAALPADWIVAHPTTITGSVGVVFMRPKLNGLMDKVGVDVEVSK 190 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S K SPF P+ + Q ++D F LV E R++ + R++T + Sbjct: 191 SGRDKDMGSPFRPTTPEEEALFQGIIDDMAARFYALVQEHRHLTPAHLETVKTARVFTAS 250 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKI---KDWNPPKNYW 259 +A +GLID +G ++ + L G+D + + +D P N + Sbjct: 251 QALSIGLIDQIGYVQDAFAKARDLAGLDPECKVVTYRRDMYPDDNPY 297 >gi|327399485|ref|YP_004340354.1| signal peptide peptidase SppA, 36K type [Hippea maritima DSM 10411] gi|327182114|gb|AEA34295.1| signal peptide peptidase SppA, 36K type [Hippea maritima DSM 10411] Length = 278 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 88/291 (30%), Positives = 156/291 (53%), Gaps = 20/291 (6%) Query: 4 VLKKIKTRYVMLSLVTLTV--VYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIER 59 ++KK V+L+++ V VYF++ N P+VA ++I G I + + I + + Sbjct: 1 MIKKATLAVVLLTIIVFIVSMVYFAF------NVPNVAVLSINGVINQKKTDNWIRALNK 54 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I R+ + A+++ + SPGG A + + ++ AI+ + KPV+ + + AS Y + ASN Sbjct: 55 IKRESNIKAVLLKIDSPGGEAVSSQRLYFAIKDLSKTKPVVCLIETIGASGAYYAASASN 114 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IV+ S++GSIGVLF+ V +LGV VKS +K +PF E + +M+ Sbjct: 115 KIVSYPASIIGSIGVLFETLNVAKLSKRLGVKAFVVKSGKLKDAGNPFREPTKEDEEMIN 174 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VV+ Y+ F+ V+ RN+ K ++G I++G A K+GL+D GG ++ + + Sbjct: 175 NVVNDIYNQFLDDVARGRNMESQKLKRYANGSIFSGRLALKIGLVDSTGGLKDAKKYIKR 234 Query: 240 LGVDQSIRKIK--DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 L I+KIK +N + LK L+ E+ I L+++ V+ ++ Sbjct: 235 L---TKIKKIKLYSFNRKPSTAGKLLKGLA-----ENIIELLERPSVKAIY 277 >gi|307155357|ref|YP_003890741.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7822] gi|306985585|gb|ADN17466.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7822] Length = 274 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 127/213 (59%), Gaps = 4/213 (1%) Query: 34 NSPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 S +ARI I G I + +++++ ++++ + AL++ + SPGG+ + I++A++ Sbjct: 9 TSKQIARIEITGVIASQTRKQVLKALKKVE-EKKYPALLLRIDSPGGTVGDSQEIYQALR 67 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 68 RLQDKVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVIIRGNNLERLLDKIGVS 127 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K +KS P K S +++ ++Q+++D SY FV+ V++SRN+ + +DGR Sbjct: 128 FKVIKSGPYKDILSFDRDLSAAEQDILQEMIDISYQQFVQTVADSRNLEVETVKTFADGR 187 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVD 243 I+TG +A +G++D +G +E+ + L L G+D Sbjct: 188 IFTGEQALNLGVVDRLGSEEDARRWLAELVGLD 220 >gi|45602163|gb|AAS71641.1| PfaP [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 242 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 111/187 (59%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 ++++ I ++ + +++ ++SPGG+ A + ++ + +++ + ++ + +MAAS GY Sbjct: 1 MQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMAASGGYY 60 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I A ++ GSIGV+ P +K LD+ GV +++ K K S F + P+ Sbjct: 61 IASAADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEGKYKDSLSLFRDSTPE 120 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +M+Q ++ +Y+ F++ V++ RN L++G+I++G +A + L+D +GG++E Sbjct: 121 EDEMIQKMLSDTYNEFIQDVAKGRNQTVKSVQNLAEGKIYSGQDAFRNKLVDEIGGRKEA 180 Query: 234 WQSLYAL 240 + L L Sbjct: 181 LEELSRL 187 >gi|108803542|ref|YP_643479.1| signal peptide peptidase A [Rubrobacter xylanophilus DSM 9941] gi|108764785|gb|ABG03667.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rubrobacter xylanophilus DSM 9941] Length = 340 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 115/202 (56%), Gaps = 3/202 (1%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVH 104 I + L + + + D+S A++++++SPGG A + + AIQ + KPV+ + Sbjct: 90 IATPEGLRDALRQAREDESVRAVVLAVNSPGGGVTASDLMHDAIQDFRRATDKPVVVSMG 149 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY IS A++ IVA ET+L GSIGV K GV +KS KA Sbjct: 150 DVAASGGYYISTAADRIVANETTLTGSIGVFIPLLNFSEASKKYGVKQIYIKSGRFKAMG 209 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +P++E+ ++ Q +VD Y FV ++ E R++P + L+DGR+++G +A+++GL+ Sbjct: 210 NPWNELTEDERRIFQSIVDQYYGEFVEVIVEGRDLPEKRVRELADGRVYSGIQAERLGLV 269 Query: 225 DVVGGQEEVWQSLYAL-GVDQS 245 D +G + + L GVD++ Sbjct: 270 DRLGNLDTAVRVARDLAGVDEA 291 >gi|145629711|ref|ZP_01785507.1| protease IV [Haemophilus influenzae 22.1-21] gi|144978048|gb|EDJ87827.1| protease IV [Haemophilus influenzae 22.1-21] Length = 308 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R ++DD S A+++ ++SPGGSA+A Sbjct: 12 NVPNKIAVVNVEGAIIDGESDEENAGGDTIARILRKAQDDNSVKAVVLRVNSPGGSAFAS 71 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A E ++ GSIG+ +P + Sbjct: 72 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADENTITGSIGIFTMFPTFE 131 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q + Y F+ +VS+ R + Sbjct: 132 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIQYGYDRFLEIVSKGRQLSKT 190 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 191 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 247 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 248 DNVSLISTLLRDT 260 >gi|257463195|ref|ZP_05627594.1| protease IV [Fusobacterium sp. D12] gi|317060783|ref|ZP_07925268.1| protease IV [Fusobacterium sp. D12] gi|313686459|gb|EFS23294.1| protease IV [Fusobacterium sp. D12] Length = 564 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 10/227 (4%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 YFS ++A + + G IED ++ +E I RD++ +I+ ++SPGGSA Sbjct: 290 YFSLVKIKNRPKQYLALLTLEGTIEDETLFLDEVEAIQRDNNVKGVILRINSPGGSALVA 349 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++ A++K++ + PV + AAS GY ++ A I A+ S+ GSIGV+ P Sbjct: 350 DMMYHAVKKLREKVPVYVSISGTAASGGYYVAVAGEKIFASPLSITGSIGVVSMIPNFSH 409 Query: 144 FLDKLGVSIKSV---KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +K VS++S+ K + + + P SE N ++ V Y F+ +VS +R I Sbjct: 410 LREKAEVSVESISKGKYADLYSYLKPLSEENYNRIRQGNLGV---YKDFLEVVSSNRKIE 466 Query: 201 YD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + L+ GR+W GAEAK+ LID +GG E ++YAL D+++ Sbjct: 467 TNFLDQHLAQGRVWLGAEAKEHKLIDELGGLE---ATIYALEQDKNL 510 >gi|284053546|ref|ZP_06383756.1| signal peptide peptidase A [Arthrospira platensis str. Paraca] gi|291569284|dbj|BAI91556.1| protease IV [Arthrospira platensis NIES-39] Length = 602 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 101/178 (56%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E + R+ +D +++ ++SPGGSA A E I R +Q + KP+I + AAS GY I Sbjct: 347 EELRRLRDNDRVKGIVLRVNSPGGSATASEVIAREVQLTREEKPIIVSMGNAAASGGYWI 406 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + S+ I A T++ GSIGV + ++ G++ VK+ P S + Sbjct: 407 AMGSDRIFAEPTTVTGSIGVFGLLFNAQDIANQNGITWDGVKTGPFADLNSISRPKTDQE 466 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 +Q +Q +VD Y FV V++ R++P ++ L +S GR+W+G +A+ +GL+D +GG ++ Sbjct: 467 LQKVQQMVDFIYQRFVSSVAQLRDLPQEEVLEMSQGRVWSGVQAEALGLVDQLGGLQD 524 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%) Query: 53 LIERIERISRDDSATALIVSLSS---PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 ++E IER S+DD L + SS P G E + RA++ K K +I + Sbjct: 90 VLETIERASKDDKIVGLYLQGSSGTTPTGFGNLKE-VRRALEGFKESGKTIIAYDTDWTE 148 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 YL S A II+ ++ S G Q ++ L++ G+ ++ + K+ PF Sbjct: 149 REYYLGSVADQIIIHPMGTVEMS-GFSSQSVFLAGALERFGIGVQVTRVGQYKSAVEPFL 207 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLI 224 E++P+ Q MQ ++ + F ++ SR++ + +V DG A+AK ++ Sbjct: 208 RQEMSPENRQQMQQLLGDLWGEFTGAIASSRSLTTAQLQQIVNQDG-FLMAADAKDREMV 266 Query: 225 DVVGGQEEVWQSLYAL 240 D + ++EV L L Sbjct: 267 DHIAHRDEVAAKLREL 282 >gi|33240745|ref|NP_875687.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238273|gb|AAQ00340.1| Periplasmic serine protease (ClpP class) [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 269 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 131/255 (51%), Gaps = 4/255 (1%) Query: 37 HVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I S ++L+ + R D AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARIIIDGPINGSTRKLVLKALRQVEDREFPALLLRIDSPGGTVGDSQEIHAALLRLRE 71 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G + A+ I+A ++ GSIGV+ + + L+K+G+ ++ Sbjct: 72 KGCHIVASFGNISASGGVYVGVAAEKIIANPGTITGSIGVILRGNNLSKLLEKIGIKFET 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS K SP ++P+ ++Q ++DSSY FV V+E R + + +DGR++T Sbjct: 132 IKSGLYKDILSPDRALSPEERSLLQSLIDSSYEQFVTAVAEGRKLNKEDVKSFADGRVFT 191 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 G +AK++GLID G + + L +DQ +R I P K S LLE Sbjct: 192 GTQAKQLGLIDDTGDENDARLLAAELADLDQKVRPITLGRPKKKLIGLLPGGKMFSKLLE 251 Query: 274 DTIPLMKQTKVQGLW 288 TI + T Q LW Sbjct: 252 -TISMELSTSGQILW 265 >gi|325478882|gb|EGC81992.1| signal peptide peptidase SppA, 36K type [Anaerococcus prevotii ACS-065-V-Col13] Length = 327 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 106/185 (57%), Gaps = 2/185 (1%) Query: 46 QIEDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEV 103 Q D+ + +E +++ D +I+ ++SPGGS YA E I I+ +K KPV T + Sbjct: 73 QSNDANDFAVEELKKAKEDPLVKGVILRVNSPGGSVYASEKIANQIKALKEADKPVYTVM 132 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 EMAAS GY IS ++ I A+ + GSIGV+ Q ++ +K G+ +++ + MK Sbjct: 133 EEMAASGGYYISAPTDRIYASNETWTGSIGVIIQSKSLQGLFEKYGIKEQNITTGKMKDA 192 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S ++N Q +VDS++ FV++V+E R + + ++DGR++ G++A +GL Sbjct: 193 GSVGRDMNDDEKAYFQGLVDSAFDRFVKIVAEGRGLSEREVRKIADGRVYDGSQALNIGL 252 Query: 224 IDVVG 228 +D +G Sbjct: 253 VDKIG 257 >gi|326801407|ref|YP_004319226.1| signal peptide peptidase SppA, 67K type [Sphingobacterium sp. 21] gi|326552171|gb|ADZ80556.1| signal peptide peptidase SppA, 67K type [Sphingobacterium sp. 21] Length = 588 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 5/188 (2%) Query: 43 IRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + G+ D Q ERI R R DD A+++ ++SPGGS+ A + I++ ++ K KP Sbjct: 318 VSGEGSDEQIGSERISRAIRTVREDDKVKAVVLRINSPGGSSLASDVIWKEVELTKKVKP 377 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKS 157 +I + ++AAS GY I+CA++ I A ++ GSIGV P ++ F +KLG++ VK+ Sbjct: 378 IIVSMGDVAASGGYYIACAADSIFAQPNTITGSIGVFGIIPNLQNFFNNKLGITFDEVKT 437 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 S + ++Q V+ +Y F + V+ R I + + GR+WTGA+ Sbjct: 438 GKYADLMSVNRPLTADERDLIQQEVNKTYDTFTKKVANGRKISQSQVDSIGQGRVWTGAQ 497 Query: 218 AKKVGLID 225 A K+GL+D Sbjct: 498 AAKIGLVD 505 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 9/192 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E++ RI+ D+ +++ + G S + I A+ K K K I E + G Sbjct: 86 EILLRIDAAKNDNRIKGIVLDMDGIGASFATLQEIRDALLKFKESKKFILAYSEGYSMKG 145 Query: 112 Y-LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y L S A + + E S V G+ Q P+ K L+KLG+ + VK K+ PF Sbjct: 146 YYLASTADKVYLNPEGS-VDFRGMAAQLPFFKGTLEKLGIEAQVVKVGTYKSAVEPFILD 204 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK---VGLID 225 +++P + + ++S Y +++ VS+SRNIP D ++D ++G +A+K L+D Sbjct: 205 KMSPANKEQVNSYLNSLYDYYLGNVSKSRNIPMDSLRNIADN--YSGRDAEKALNAKLVD 262 Query: 226 VVGGQEEVWQSL 237 + + E+ L Sbjct: 263 GLKYKNEIIDEL 274 >gi|281424222|ref|ZP_06255135.1| signal peptide peptidase SppA [Prevotella oris F0302] gi|281401491|gb|EFB32322.1| signal peptide peptidase SppA [Prevotella oris F0302] Length = 588 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 122/214 (57%), Gaps = 9/214 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ V+ SP R + ++ + +E +++DD A+++ ++S GGSAYA Sbjct: 302 VYYAYGDIVDKASPQSIFQDDRQIV--GNDMCKDLEDLAKDDDVKAVVIRVNSGGGSAYA 359 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY-PYV 141 E I+ I ++K KPV+ + AAS GY +S +N IVA T++ GSIG+ + Sbjct: 360 SEQIWHQISELKKIKPVVVSMSGAAASGGYYLSSNANWIVADPTTITGSIGIFGLFLDRS 419 Query: 142 KPFLDKLGVS---IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + KLG++ +K+ ++S A PF+ P+ + ++Q+ V+ Y F + V+E R Sbjct: 420 ELYTKKLGINYAEVKTNRNSVFGASGHPFT---PEQLSLLQNNVNRGYMLFKKRVAEGRK 476 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ ++ GR+W G +A K+ L+D +GG ++ Sbjct: 477 MTMEQVENIAQGRVWLGQDAIKLKLVDQLGGLDD 510 >gi|183220418|ref|YP_001838414.1| signal peptide peptidase SppA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910532|ref|YP_001962087.1| periplasmic serine protease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775208|gb|ABZ93509.1| Periplasmic serine protease (ClpP class) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778840|gb|ABZ97138.1| Signal peptide peptidase SppA, S49 family [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 332 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 103/177 (58%), Gaps = 3/177 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E ++R RD +I+ ++SPGG+ A + I++ I+K K RK PV + AAS Y Sbjct: 84 ESLKRAERDPDVKGVILKINSPGGTVTASDIIYQEIKKFKERKGIPVFAGFMDTAASGAY 143 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A T++ GS+GV+ VK LDK+G+ +S S P KA SP +E+ Sbjct: 144 YIAMATDSIGAHPTTVTGSVGVIMSGINVKEGLDKIGIKDQSFTSGPNKALGSPTTEMTA 203 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +++Q ++DS Y F +V + R + + + DGRI+T +A+K G+ID +G Sbjct: 204 EQRKILQSIIDSLYSRFFEVVKKGRPKVSEARLKEICDGRIFTAEQAQKEGMIDFIG 260 >gi|323702606|ref|ZP_08114268.1| signal peptide peptidase SppA, 36K type [Desulfotomaculum nigrificans DSM 574] gi|323532425|gb|EGB22302.1| signal peptide peptidase SppA, 36K type [Desulfotomaculum nigrificans DSM 574] Length = 312 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 106/178 (59%), Gaps = 1/178 (0%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASA 110 E++ ++ + A+I+ L++ GGS + I R +++++ + K V+ + EMAAS Sbjct: 68 EIVANLKEARENPEIKAVILRLNTGGGSVVGSDEIGREVERLRRSGKKVVAVMGEMAASG 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+C ++ IVA + GSIGV+ Q +K +K+GV +++ K+ P K + ++ Sbjct: 128 GYWIACKADKIVANPGTFTGSIGVIMQVTKMKELYNKIGVDVETFKTGPHKDMGATGRDI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+ ++ Q +V SY F+ +V+E R + + L+DGR++TG +AK +GL+D +G Sbjct: 188 TPEERRIFQGLVQDSYDDFINVVAEGRKMDPARVRQLADGRVYTGKQAKALGLVDELG 245 >gi|229844213|ref|ZP_04464354.1| protease IV [Haemophilus influenzae 6P18H1] gi|229813207|gb|EEP48895.1| protease IV [Haemophilus influenzae 6P18H1] Length = 615 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADSNTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 9/114 (7%) Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIK 153 KPVI + YL S A I + + +GS+ G+ + Y K LDKL V+ Sbjct: 138 KPVIAYADNYSQGQYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPH 193 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 194 IFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|88807555|ref|ZP_01123067.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 7805] gi|88788769|gb|EAR19924.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 7805] Length = 270 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/236 (31%), Positives = 128/236 (54%), Gaps = 8/236 (3%) Query: 41 IAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-P 98 IAI G I S + + + R ++ AL++ + SPGG+ + I A+ +++ + Sbjct: 16 IAIEGAISGSTRRRVLKALREVQEREFPALLLRIDSPGGTVGDSQEIHAALLRLREKGCR 75 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ ++AS G + A+ IVA ++ GSIGV+ + + LDK+G+ ++VKS Sbjct: 76 VVASFGNISASGGVYVGVAAETIVANPGTITGSIGVILRGNNLSELLDKIGIRFETVKSG 135 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K SP ++P+ Q++QD++DSSY FV V+E R + D +DGR+++GA+A Sbjct: 136 TYKDILSPDRALSPEERQLLQDLIDSSYSQFVDAVAEGRGLEPDAVRAFADGRVFSGAQA 195 Query: 219 KKVGLIDVVGGQEE--VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 K +GL+D +G +E V + A ++ R + P K+ L+ L SSLL Sbjct: 196 KDLGLVDELGDEEHARVLAARLADLDEERCRPVTLGKPRKSL----LQGLPGSSLL 247 >gi|261856346|ref|YP_003263629.1| signal peptide peptidase SppA, 36K type [Halothiobacillus neapolitanus c2] gi|261836815|gb|ACX96582.1| signal peptide peptidase SppA, 36K type [Halothiobacillus neapolitanus c2] Length = 350 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDSQE-----LIERIER 59 R + L+LV + + S S ++D+ P I I G I QE +I +E+ Sbjct: 65 RLISLALVIWIIAWISLSGDLDDDHGVVIKQPSAGIIDISGVIAAGQEASAEEIIPVLEK 124 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 ++ +++ +++PGGS IF AI +++ KPV V ++ AS GY I+ Sbjct: 125 AFKNTQIKGIVLRMNTPGGSPVQSGEIFDAIMRLRKEYPAKPVYAVVEDVCASGGYYIAA 184 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV + KLG+ + + S KA PFS NP VQ Sbjct: 185 AADKIFANQASLVGSIGVRMDSFGFVDAMQKLGIESRLITSGANKAMLDPFSPENPAQVQ 244 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 MQ+++D + F+ V + R L G I+TGA+A+K GLID +G Sbjct: 245 YMQNLLDQVHQQFIDAVKKGRGKRLANDPDLFSGLIYTGAQAQKNGLIDGLG 296 >gi|226314459|ref|YP_002774355.1| signal peptide peptidase [Brevibacillus brevis NBRC 100599] gi|226097409|dbj|BAH45851.1| putative signal peptide peptidase [Brevibacillus brevis NBRC 100599] Length = 321 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 118/230 (51%), Gaps = 16/230 (6%) Query: 25 FSWSSHVEDN--SPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVS 72 F+W +V + + ++ + G I Q L E++ RI D+ AL++ Sbjct: 38 FAWEENVVSGYGNSKIVQLFVNGTISGQQNSAGVPSMTELLTEQLRRIEEDELVKALVLR 97 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + SPGG A + + R + ++K + P++ + AAS GY ++ + I A +L G Sbjct: 98 IDSPGGEVVATDELHRRLLRLKQVRNLPIVVSMGSTAASGGYYLATTGDAIFANPNTLTG 157 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 S+GV+F +KLGV ++KS K SP + + Q +V+ SY+ FV Sbjct: 158 SLGVIFNLFNYSEAANKLGVHQYAIKSGRFKDIGSPSRPLTDPERHIFQTLVNESYNNFV 217 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ + RN+ + L ++DGR+++G +AK++GLID G EE + YAL Sbjct: 218 DVIVKGRNLSRQRVLEIADGRVYSGEQAKRMGLIDEFGDLEEATR--YAL 265 >gi|91069876|gb|ABE10807.1| signal peptide peptidase SppA [uncultured Prochlorococcus marinus clone ASNC1363] Length = 269 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 37 HVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I I S + ++ +++I D ALIV + SPGG+ + I+ AI+++K Sbjct: 12 RIARIVIDEPITSSTRVSVLKALKQIE-DREFPALIVRIDSPGGTVGDSQEIYSAIKRLK 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 ++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G+ + Sbjct: 71 DKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIGIKFE 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP ++ + ++Q ++D SY F V++ RN+P ++ +DGRI+ Sbjct: 131 TVKSGVFKDILSPDKPLSEEGRGLLQGLIDESYKQFTEAVADGRNLPVEEVRKFADGRIF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA 239 TG +A ++GL+D V G E V + L A Sbjct: 191 TGTQALELGLVDKV-GDEFVARELAA 215 >gi|301170278|emb|CBW29884.1| protease IV (signal peptide peptidase) [Haemophilus influenzae 10810] Length = 615 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDDENSGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFQGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFHVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|209526666|ref|ZP_03275190.1| signal peptide peptidase SppA, 36K type [Arthrospira maxima CS-328] gi|209492902|gb|EDZ93233.1| signal peptide peptidase SppA, 36K type [Arthrospira maxima CS-328] Length = 273 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 37 HVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I D+++ + + + AL++ + SPGG+ + I+ A++ ++ Sbjct: 12 QIARIEISGAIAGDTRKRVLEALKTVEERKFPALLLRIDSPGGTVGDSQEIYSALKSLRK 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K + Sbjct: 72 KVKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K + E+ Q++Q+++D+SY FV V+ESRN+ + +DGRI+TG Sbjct: 132 KSGPYKDILAFDRELTEPEQQILQELIDTSYQQFVSTVAESRNLEIEAVRSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEE 232 +A ++G+ID +G +E+ Sbjct: 192 EQALQLGVIDRLGSEED 208 >gi|284053896|ref|ZP_06384106.1| signal peptide peptidase A [Arthrospira platensis str. Paraca] gi|291565705|dbj|BAI87977.1| protease IV [Arthrospira platensis NIES-39] Length = 273 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 37 HVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I D+++ + + + AL++ + SPGG+ + I+ A++ ++ Sbjct: 12 QIARIEISGAIAGDTRKRVLEALKTVEERKFPALLLRIDSPGGTVGDSQEIYSALKSLRK 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K + Sbjct: 72 KVKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K + E+ Q++Q+++D+SY FV V+ESRN+ + +DGRI+TG Sbjct: 132 KSGPYKDILAFDRELTEPEQQILQELIDTSYQQFVSTVAESRNLEIEAVRSFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEE 232 +A ++G+ID +G +E+ Sbjct: 192 EQALQLGVIDRLGSEED 208 >gi|145637565|ref|ZP_01793222.1| protease IV [Haemophilus influenzae PittHH] gi|145269251|gb|EDK09197.1| protease IV [Haemophilus influenzae PittHH] Length = 615 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENSGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|68249944|ref|YP_249056.1| protease IV [Haemophilus influenzae 86-028NP] gi|68058143|gb|AAX88396.1| protease IV [Haemophilus influenzae 86-028NP] Length = 615 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRIL 247 >gi|256424808|ref|YP_003125461.1| signal peptide peptidase SppA, 67K type [Chitinophaga pinensis DSM 2588] gi|256039716|gb|ACU63260.1| signal peptide peptidase SppA, 67K type [Chitinophaga pinensis DSM 2588] Length = 587 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 7/187 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S I+ I +D A++ ++SPGGSA A E+I+R + K KPV+ + + AAS Sbjct: 326 SGHFIKLIREARQDKDVKAIVFRVNSPGGSALASESIWRELVLAKKSKPVVVSMGDYAAS 385 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKS---SPMKAEPS 165 GY ISC ++ I A +L GSIGV P ++ F +KLGV+ VK+ + + Sbjct: 386 GGYYISCMADSIFAQPNTLTGSIGVFAVLPNLQGFFKNKLGVTFDGVKTAQYADLGNTSR 445 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P +++ K +Q+ VDS Y F V E R + ++ GR+W+G +AK++GL+D Sbjct: 446 PLTDIEKK---FIQNSVDSIYSTFKSRVVEGRKLSGAVVDSIAQGRVWSGIQAKQLGLVD 502 Query: 226 VVGGQEE 232 +GG E Sbjct: 503 RIGGINE 509 >gi|114563316|ref|YP_750829.1| signal peptide peptidase SppA, 67K type [Shewanella frigidimarina NCIMB 400] gi|114334609|gb|ABI71991.1| signal peptide peptidase SppA, 67K type [Shewanella frigidimarina NCIMB 400] Length = 614 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 100/167 (59%), Gaps = 2/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD A+++ + SPGGSA+A E I + + +K KPV+ + +AAS GY IS +++ I Sbjct: 362 DDKVKAVVLRVDSPGGSAFASEQIRQEVLALKAAGKPVVVSMGSLAASGGYWISASADYI 421 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA T+L GSIG+ + + L+ GV+ V +S A SP E+NP+ ++Q Sbjct: 422 VATPTTLTGSIGIFGMFATFEQALNHFGVTSDGVATSDW-AGLSPARELNPQVAAVVQRH 480 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ YH F+ LV++ R++ ++ ++ GR+WTG A +GL+D +G Sbjct: 481 IERGYHEFISLVAKERHMTLEQVDNIAQGRVWTGKRALTLGLVDELG 527 >gi|298529709|ref|ZP_07017112.1| signal peptide peptidase SppA, 36K type [Desulfonatronospira thiodismutans ASO3-1] gi|298511145|gb|EFI35048.1| signal peptide peptidase SppA, 36K type [Desulfonatronospira thiodismutans ASO3-1] Length = 296 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 2/224 (0%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSL 73 ML++ ++F P + + + G I DS+++++ I+ + DS +++ + Sbjct: 29 MLAMAVFNFLFFDGPKL--RTQPKIGVVNVSGLITDSRDIVDWIQELEEKDSVKGVLLRV 86 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +SPGG + +FRA++ + KPV+ + +AAS GY + + +IVA +L SIG Sbjct: 87 NSPGGVVAPSQEVFRAVKDLAREKPVVASLGSVAASGGYYAASPAGVIVANPGTLTASIG 146 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V ++ L KLG+ + V S K + + + + Q +VD + FV+ V Sbjct: 147 VKVTLTNIQELLQKLGIEDQGVYSGEFKDAGTVSRPMTEEEREYFQGLVDDMHEQFVQDV 206 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +R++ + L+DGR TG +A + GL+D +GG+ E L Sbjct: 207 ALARDMDEQRVYDLADGRAMTGRQALEAGLVDELGGRSEALDIL 250 >gi|229847143|ref|ZP_04467248.1| protease IV [Haemophilus influenzae 7P49H1] gi|229809972|gb|EEP45693.1| protease IV [Haemophilus influenzae 7P49H1] Length = 615 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRIL 247 >gi|16273441|ref|NP_439690.1| protease IV [Haemophilus influenzae Rd KW20] gi|260580322|ref|ZP_05848151.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae RdAW] gi|1174428|sp|P45243|SPPA_HAEIN RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase gi|1574383|gb|AAC23191.1| protease IV (sppA) [Haemophilus influenzae Rd KW20] gi|260092999|gb|EEW76933.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae RdAW] Length = 615 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADSNTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLSDT 567 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRIL 247 >gi|229496545|ref|ZP_04390259.1| signal peptide peptidase SppA, 67K type [Porphyromonas endodontalis ATCC 35406] gi|229316442|gb|EEN82361.1| signal peptide peptidase SppA, 67K type [Porphyromonas endodontalis ATCC 35406] Length = 554 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 14/282 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-------LIERIERISRDDSATAL 69 VTL VY S + V + G+I E L+ R+ + + DD A+ Sbjct: 256 FVTLNRVYNSERRYDNSGDGTVQVLFAEGEITSGVEFGTITEALVGRLLKAADDDDIDAV 315 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++ ++SPGGS+Y + I+ A++ K++KP++ + + AAS GY ISCASN I A T++ Sbjct: 316 VLRVNSPGGSSYVSDQIWDAVRYTKSKKPIVVSMGDYAASGGYYISCASNYIFAEPTTIT 375 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ +P K V+ VK++ + F + + +MQ ++ Y F Sbjct: 376 GSIGIFGLFPNFAGTAQKFSVTEDGVKTAKYADFGNVFRPMTDEERALMQAYIERGYDTF 435 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV------- 242 + V+E R + + +++ GR+WTG +A L+D +GG +E L Sbjct: 436 LSRVAEGRKLEKSQVDLVAQGRVWTGKQALARHLVDELGGLDEAIAKAAELANINTPSVW 495 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +S R+ K N Y F L + L E+ I +K+ ++ Sbjct: 496 YESSRQDKFSNLVDRYLFEGSDKLVRNILTEEEIEALKKARI 537 >gi|59712250|ref|YP_205026.1| protease IV (signal peptide peptidase) [Vibrio fischeri ES114] gi|59480351|gb|AAW86138.1| protease IV (signal peptide peptidase) [Vibrio fischeri ES114] Length = 618 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD A+++ + SPGGSA+A E I I +K KPV+ + +AAS GY IS +++ I Sbjct: 363 DDKVKAVVLRVDSPGGSAFASEVIRNEIDALKEAGKPVVVSMSSVAASGGYWISASADKI 422 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A T++ GSIG+ + L+K+G+ + +SP S +N Q+MQ Sbjct: 423 IAQPTTITGSIGIFGILTTFEKSLEKMGIHSDGISTSPFNG-VSITRPLNDDVAQVMQLG 481 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ YH F++LVS+ RN+ + ++ GR+WTG +A K GL+D +G ++ Q+ Sbjct: 482 IEHGYHRFIKLVSDHRNLSLEAVDKVAQGRVWTGKDALKHGLVDQLGDFDDAVQA 536 >gi|293557142|ref|ZP_06675696.1| putative signal peptide peptidase [Enterococcus faecium E1039] gi|291600711|gb|EFF31009.1| putative signal peptide peptidase [Enterococcus faecium E1039] Length = 341 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ + D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHENFMEQLKAVEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FVR+VSE RN + ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEEAVLQAYIDSAYQRFVRIVSEGRNKSEEAVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ Q++ Sbjct: 265 LGFPEDALQAM 275 >gi|297569510|ref|YP_003690854.1| signal peptide peptidase SppA, 36K type [Desulfurivibrio alkaliphilus AHT2] gi|296925425|gb|ADH86235.1| signal peptide peptidase SppA, 36K type [Desulfurivibrio alkaliphilus AHT2] Length = 308 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 112/204 (54%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V I +RG I + +LIE++ R D A+++ + SPGG+ A + +F +++ K Sbjct: 54 VGVIEVRGVISSADQLIEQLTDFRRKDKIKAIVLRIDSPGGAVGASQELFEEVKRTNRVK 113 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV+ + +AAS G + + I+A +L GSIGV+ ++ ++ L K+G +++KS Sbjct: 114 PVVASMGSVAASGGLYAALGAERIIANPGTLTGSIGVIIKFANLEELLQKIGYRSETIKS 173 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 +K + + P +M+ ++V + + FV V+ SR++P + +DGRI++GA Sbjct: 174 GELKDTGAMDRPLTPGEREMLAEMVHAVHRQFVDDVAASRDLPVGQVEAFADGRIFSGAR 233 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG 241 A ++ L+D +G + +LG Sbjct: 234 ALELQLVDALGNLNDAAMLAASLG 257 >gi|257898289|ref|ZP_05677942.1| protease/peptidase [Enterococcus faecium Com15] gi|257836201|gb|EEV61275.1| protease/peptidase [Enterococcus faecium Com15] Length = 341 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ + D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHENFMEQLKAVEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FVR+VSE RN + ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEEAVLQAYIDSAYQRFVRIVSEGRNKSEEAVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ Q++ Sbjct: 265 LGFPEDALQAM 275 >gi|309751034|gb|ADO81018.1| Protease IV [Haemophilus influenzae R2866] Length = 615 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A+ S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-AKTSAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIVYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|209528245|ref|ZP_03276710.1| signal peptide peptidase SppA, 67K type [Arthrospira maxima CS-328] gi|209491317|gb|EDZ91707.1| signal peptide peptidase SppA, 67K type [Arthrospira maxima CS-328] Length = 503 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 100/175 (57%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E + R+ +D +++ ++SPGGSA A E I R +Q + KP+I + AAS GY I Sbjct: 248 EELRRLRDNDRVKGIVLRVNSPGGSATASEVIAREVQLTREEKPIIVSMGNAAASGGYWI 307 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + S+ I+A T++ GSIGV + ++ G++ VK+ P S + Sbjct: 308 AMGSDRILAEPTTVTGSIGVFGLLFNAQDIANQNGITWDGVKTGPFADLNSISRPKTDQE 367 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ +Q +VD Y FV V++ R++P ++ L +S GR+W+G +A+ +GL+D +GG Sbjct: 368 LEKVQQMVDLIYQRFVSSVAQLRDLPQEEVLEMSQGRVWSGVQAEALGLVDQLGG 422 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 YL S A II+ ++ S G Q ++ L++ G+ ++ + K+ PF E Sbjct: 53 YLGSVADEIIIHPMGTVEMS-GFSSQTVFLAGALERFGIGVQVTRVGQYKSAVEPFLRQE 111 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVV 227 ++P+ Q MQ ++ + F ++ SR++ + +V DG A+AK ++D + Sbjct: 112 MSPENRQQMQQLLGDLWGEFTGAIASSRSLTTAQLQQIVNQDG-FLMAADAKDREMVDQI 170 Query: 228 GGQEEVWQSLYAL 240 ++EV L L Sbjct: 171 AHRDEVAAQLREL 183 >gi|257887182|ref|ZP_05666835.1| protease/peptidase [Enterococcus faecium 1,141,733] gi|257823236|gb|EEV50168.1| protease/peptidase [Enterococcus faecium 1,141,733] Length = 341 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ + D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHENFMEQLKAVEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FVR+VSE RN + ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEEAVLQAYIDSAYQRFVRIVSEGRNKSEEAVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ Q++ Sbjct: 265 LGFPEDALQAM 275 >gi|52081444|ref|YP_080235.1| signal peptide peptidase [Bacillus licheniformis ATCC 14580] gi|52786819|ref|YP_092648.1| hypothetical protein BLi03092 [Bacillus licheniformis ATCC 14580] gi|319647352|ref|ZP_08001574.1| SppA protein [Bacillus sp. BT1B_CT2] gi|52004655|gb|AAU24597.1| signal peptide peptidase [Bacillus licheniformis ATCC 14580] gi|52349321|gb|AAU41955.1| SppA [Bacillus licheniformis ATCC 14580] gi|317390699|gb|EFV71504.1| SppA protein [Bacillus sp. BT1B_CT2] Length = 335 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 119/221 (53%), Gaps = 16/221 (7%) Query: 33 DNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGG 78 ++S +A + + G I D+ + ++ +E+ D + +++ ++SPGG Sbjct: 55 NSSRKIAVLEVNGTISDNGGASGLFSSEGYNHRSFLQMLEKAKDDSAVKGIVLRVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + ++++K +KP+ + MAAS GY IS ++ I AA +L GS+GV+ Sbjct: 115 GVYESAEIHKKLEEIKKDTKKPIYVSMGSMAASGGYYISTPADKIFAAPDTLTGSLGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + +KLG+ +++KS K SP ++ K ++MQ +VD +Y FV +++E Sbjct: 175 ESLNYSKLAEKLGLKTETIKSGEFKDIMSPTRDMTKKEREIMQSMVDDAYEGFVDVIAEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + + ++DGR++ G +AK+ LID +G E+ +++ Sbjct: 235 RGMSENDVKKIADGRVYDGRQAKQNHLIDELGYYEDAVKAM 275 >gi|222823269|ref|YP_002574842.1| protease IV [Campylobacter lari RM2100] gi|222538490|gb|ACM63591.1| protease IV [Campylobacter lari RM2100] Length = 297 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 121/220 (55%), Gaps = 5/220 (2%) Query: 16 SLVTLTVVYFSWSSHVEDNS----PHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 + V L +V+ S +DN+ ++A+I ++G+I D+ L+E+I ++ D++ ++ Sbjct: 24 TFVFLFIVFLILSPS-KDNTKLSNANLAQINLKGEINDASTLLEQIYKLKDDNAIKGVLF 82 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG+ I AIQ +K +KPV+ AS YL + +N+I+A S VGS Sbjct: 83 YIDSPGGAFAPSMEIALAIQDLKAKKPVVAYAGGTIASGSYLSAVGANMIIANPASFVGS 142 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ Q K+G+S +++K+ K + + + + + +Q++ + SY F Sbjct: 143 IGVIMQGFNASELAQKIGISDQTIKAGTYKEAGTFMRKWSKEEKEFLQNLANQSYILFTN 202 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 V+++RN+ ++T +D +++ EA K+ LID VG E Sbjct: 203 FVAKNRNLDLNQTKSWADAKVFLANEALKLKLIDKVGNYE 242 >gi|320156922|ref|YP_004189301.1| protease IV [Vibrio vulnificus MO6-24/O] gi|319932234|gb|ADV87098.1| protease IV [Vibrio vulnificus MO6-24/O] Length = 616 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 15/221 (6%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE--------LIERIERISR-DDSATA 68 + Y+ + + + DN + +A + G I D Q+ + + R +R DD A Sbjct: 307 ISYYDYRATMRDNFDVNADDIAIVVASGTIMDGQQPRGTVGGDTVAGLLRQARNDDKVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I +Q +K+ KP++ + +AAS GY IS +++ I+A T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEVQALKDAGKPIVVSMSSLAASGGYWISMSADKIIAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + +KLG+ V +SP E + ++ A Q Q ++ Y Sbjct: 427 LTGSIGIFSVITTFEKGFNKLGIYTDGVGTSPFSGEGIS-TGLSKGASQAFQMGIEHGYQ 485 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LVS++R++ D ++ GR+WTG +A + GL+D +G Sbjct: 486 RFISLVSDNRDLSLDAVDKVAQGRVWTGYDALQHGLVDQIG 526 >gi|303245615|ref|ZP_07331898.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] gi|302492878|gb|EFL52743.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] Length = 311 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 111/202 (54%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P + + I G I +++++ I ++ D S +++ ++SPGG+ + ++ A++K++ Sbjct: 53 PRIGVVRIEGPIVAAEDVVAFIRKLREDKSVKGVVLRVNSPGGAFGPSQEMYMAVKKLRA 112 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ +AAS GY +C + I A ++ GSIGV+ Q+ V+ L KLG+ +S+ Sbjct: 113 VKPVVASFSAVAASGGYYAACPAGRIFANPGTITGSIGVMTQFANVRDLLQKLGIDFESL 172 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + +K SPF + ++ ++D F V++ R + D ++DGR TG Sbjct: 173 TTGKLKDAGSPFKPLTDDQRAYLKGLIDDLNKQFSGDVAKQRKLAKDAIAAIADGRAMTG 232 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 A A ++GL+D +GGQEE L Sbjct: 233 ARALELGLVDELGGQEEAVDYL 254 >gi|227551682|ref|ZP_03981731.1| S49 family peptidase [Enterococcus faecium TX1330] gi|257884398|ref|ZP_05664051.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|257895718|ref|ZP_05675371.1| protease/peptidase [Enterococcus faecium Com12] gi|293377673|ref|ZP_06623862.1| signal peptide peptidase SppA, 36K type [Enterococcus faecium PC4.1] gi|293571866|ref|ZP_06682882.1| protease/peptidase protein [Enterococcus faecium E980] gi|227179123|gb|EEI60095.1| S49 family peptidase [Enterococcus faecium TX1330] gi|257820236|gb|EEV47384.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|257832283|gb|EEV58704.1| protease/peptidase [Enterococcus faecium Com12] gi|291608120|gb|EFF37426.1| protease/peptidase protein [Enterococcus faecium E980] gi|292643673|gb|EFF61794.1| signal peptide peptidase SppA, 36K type [Enterococcus faecium PC4.1] Length = 341 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ + D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHENFMEQLKAVEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FVR+VSE RN + ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPKTKEEEAVLQAYIDSAYQRFVRIVSEGRNKSEEAVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ Q++ Sbjct: 265 LGFPEDALQAM 275 >gi|328957466|ref|YP_004374852.1| putative signal peptide peptidase SppA [Carnobacterium sp. 17-4] gi|328673790|gb|AEB29836.1| putative signal peptide peptidase SppA [Carnobacterium sp. 17-4] Length = 345 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 116/220 (52%), Gaps = 15/220 (6%) Query: 33 DNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGS 79 D S + +++ G I D Q ++++E++ DD+ A+++S+++PGG Sbjct: 61 DTSKRIVLLSVDGTILDGQTSGFTGDSVYDHDLFLQQLEQVLVDDTIKAIVLSVNTPGGG 120 Query: 80 AYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y I + +++ KP+ + MAAS GY IS ++ I A+E +L GSIGV+ Sbjct: 121 TYESAQIKDKLVEIQETTEKPIYVSMGSMAASGGYYISASAEKIFASEETLTGSIGVIMS 180 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +K+GV ++KS K S + + +++Q +V++SY FV ++ E R Sbjct: 181 GTNFSELFEKIGVDDTTIKSGEFKDIGSSTRTMTEEDAEILQTMVNTSYDRFVDVIVEGR 240 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++DGRI+ GA+A GL+D +G QE+ +++ Sbjct: 241 GMDEAVVRTIADGRIYDGAQAVSNGLVDEIGYQEDALEAI 280 >gi|145642068|ref|ZP_01797639.1| protease IV [Haemophilus influenzae R3021] gi|145273248|gb|EDK13123.1| protease IV [Haemophilus influenzae 22.4-21] Length = 308 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 12 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 71 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 72 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 131 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV+ V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 132 NSIKKIGVNADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLSKT 190 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 191 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 247 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 248 DNVGLISTLLRDT 260 >gi|328954249|ref|YP_004371583.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] gi|328454573|gb|AEB10402.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] Length = 338 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 2/211 (0%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKP 98 + + Q+ L E +++ + D AL+V L SPGG+ A + I+ +Q+ K +R P Sbjct: 79 LGVGKQVSLPARLKEELQKAAADRRLKALVVRLHSPGGTVAAADLIYHELQQFKQQHRLP 138 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 ++ V +AAS GY ++ A+++IVA TSL+GSIGV+ +K L++ GV + VK+ Sbjct: 139 LVVSVLGLAASGGYYLAQAADVIVAQPTSLIGSIGVIALKFNLKGLLNRFGVETELVKTG 198 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 +K SPF + ++MQ ++D + FV +V+ RN L DGR++T +A Sbjct: 199 RLKDLWSPFRPATAEEARIMQALLDDFHRRFVAVVAAGRNFDPATAQRLGDGRLFTATQA 258 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + L+D +G ++ + L ++ R I Sbjct: 259 LDLNLVDQLGYLDDAFNRAKELAGIETARII 289 >gi|307293218|ref|ZP_07573064.1| signal peptide peptidase SppA, 67K type [Sphingobium chlorophenolicum L-1] gi|306881284|gb|EFN12500.1| signal peptide peptidase SppA, 67K type [Sphingobium chlorophenolicum L-1] Length = 633 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 113/215 (52%), Gaps = 10/215 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ--------ELIERIERIS-RDDSATALIVSLSSPGGS 79 +H N + + I G I D + + I ++ R + + AL+V + SPGGS Sbjct: 304 AHKPANDGEIGVLTIAGDIVDGEAGPGTAAGDTIAKLLRKALAEKDLKALVVRVDSPGGS 363 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E I AI + K++ PV+ + +AAS GY +S +N+I A ++ GSIGV Sbjct: 364 VMASEKIRGAIMEAKSQGLPVVVSMGNVAASGGYWVSTPANMIFAEPDTITGSIGVFGIL 423 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K+GV+ VK++P+ +P P+ ++MQ V+ Y FV LV++SR Sbjct: 424 PSFEGTLAKIGVTTDGVKTTPLSGQPDVAGGTTPEFDRIMQMGVEDIYGRFVGLVAQSRR 483 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + ++ GR+W G A+++GL+D GG E+ Sbjct: 484 KTPQQIDAIAQGRVWDGGTARQIGLVDRFGGLEDA 518 >gi|46907816|ref|YP_014205.1| U7 family peptidase [Listeria monocytogenes serotype 4b str. F2365] gi|46881085|gb|AAT04382.1| peptidase, U7 family [Listeria monocytogenes serotype 4b str. F2365] Length = 337 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 131/245 (53%), Gaps = 21/245 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWN 253 R + ++ ++DGRI+ G +AK+ GLID G QE+ +L AL +Q + + ++ Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQED---ALEALKKEQGLADATVIQYD 293 Query: 254 PPKNY 258 P+N+ Sbjct: 294 TPENF 298 >gi|145631778|ref|ZP_01787538.1| protease IV [Haemophilus influenzae R3021] gi|144982568|gb|EDJ90118.1| protease IV [Haemophilus influenzae R3021] Length = 289 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 6/226 (2%) Query: 52 ELIERIERISRDD-SATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAAS 109 + I RI R + DD S A+I+ ++SPGGSA+A E I + + ++ KPVI + MAAS Sbjct: 20 DTIARILRKAHDDNSVKAVILRVNSPGGSAFASEIIRQETENLQKIGKPVIVSMGAMAAS 79 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY IS ++ I+A ++ GSIG+ +P + + K+GV+ V ++ + A+ S FS Sbjct: 80 GGYWISSTADYIIADANTITGSIGIFTMFPTFENSIKKIGVNADGVSTTEL-AKTSAFSP 138 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + Q ++ Y F+ +VS+ R + + L+ G++W G++A + GL+D +G Sbjct: 139 LAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVDKLAQGQVWLGSDAFQNGLVDEIGS 198 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 E L + ++D++ WF D IS+LL DT Sbjct: 199 FNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNVSLISTLLRDT 241 >gi|254459026|ref|ZP_05072449.1| signal peptide peptidase SppA, 36K type [Campylobacterales bacterium GD 1] gi|207084297|gb|EDZ61586.1| signal peptide peptidase SppA, 36K type [Campylobacterales bacterium GD 1] Length = 289 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 128/252 (50%), Gaps = 6/252 (2%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 I+ + + V + V+ F+ S + ++ +I + G I + E++E+IE+ +++ Sbjct: 18 IQNHFKAMVFVLILVLIFAPESEQDLTQNNLQQINLVGPIIEVSEILEQIEKAGANNNVK 77 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGG+ I AI++++ +KPVI AS Y S +N I+A S Sbjct: 78 GVLLVVDSPGGAVAPSIEIAYAIKRLRTKKPVIAYAKGTIASGSYYASIWANEIIANPGS 137 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q + +DK+G+S +SVK+ K +P + P + + V+ +Y Sbjct: 138 MVGSIGVIMQGADMSELMDKIGISTQSVKAGKYKQVGTPDRKWEPYEINELNKVIQGTYD 197 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSI 246 F + V+++R + K ++ I+T +AK VGL+D +G L L GVD I Sbjct: 198 MFTQDVAKARGLDIKKRDQFANAHIFTAQQAKDVGLVDSLGVSHNAKMKLILLSGVDDPI 257 Query: 247 RKIKDWNPPKNY 258 WN + Sbjct: 258 -----WNKEDKF 264 >gi|311069439|ref|YP_003974362.1| signal peptide peptidase [Bacillus atrophaeus 1942] gi|310869956|gb|ADP33431.1| signal peptide peptidase [Bacillus atrophaeus 1942] Length = 334 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 114/203 (56%), Gaps = 4/203 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S ++DN + + G + + ++ +E+ D + +++ ++SPGG Y I Sbjct: 65 SGTIQDNGDSSSLLGSDGY--NHRTFLKNLEQAKEDKTVKGIVLKVNSPGGGVYESAEIH 122 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++K +KP+ + MAAS GY IS ++ I A+ ++ GS+GV+ + Sbjct: 123 KKLEEIKKETKKPIYVSMGSMAASGGYYISADADKIYASPETITGSLGVIMESVNYSKLA 182 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 D+LG+ +++KS K S ++ + ++MQ +VD+SY FV ++S+ RN+ + Sbjct: 183 DELGIKFETIKSGAHKDIMSATRDMTDEEKKIMQSMVDNSYEGFVDVISKGRNMSEAEVK 242 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 ++DGR++ G +AKK+ L+D +G Sbjct: 243 KIADGRVYDGKQAKKLNLVDELG 265 >gi|303236590|ref|ZP_07323172.1| signal peptide peptidase SppA, 67K type [Prevotella disiens FB035-09AN] gi|302483243|gb|EFL46256.1| signal peptide peptidase SppA, 67K type [Prevotella disiens FB035-09AN] Length = 590 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 4/208 (1%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +Y+++ V++ +A + + +++ +E + DD+ A+++ ++S GGSAYA Sbjct: 306 IYYAYGDIVDN---QIAGLFGNNHVIAGKQVCSDLEEMMNDDNIKAVVIRINSGGGSAYA 362 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-YV 141 E ++ I ++K KPV+ + AAS GY +S +N IVA T++ GSIG+ +P Y Sbjct: 363 SEQMWHQIMELKKVKPVVVSMGGYAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPDYS 422 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 +KLG+ V ++ A S NP+ ++M+Q +D Y F V++ R + Sbjct: 423 GLATEKLGLKFDQVVTNKNAAFGSNVRPFNPEEMRMIQAYIDRGYATFKNRVAQGRKMTI 482 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + L+ G ++TG +A K+ L+D +GG Sbjct: 483 QQVENLAQGHVYTGEDALKIKLVDQLGG 510 >gi|313623585|gb|EFR93759.1| putative signal peptide peptidase SppA [Listeria innocua FSL J1-023] Length = 337 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 121/223 (54%), Gaps = 18/223 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ E ++++E + +D+ +++ ++SPG Sbjct: 57 EGGADTIAVLSVDGTIQDTGEAGSLFSETGYNHTFFMDQLEEVRNNDAIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I ++K + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIKKERKIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 Q Y Y + KLGVS ++KS K S + + ++MQ ++D SY+ FV++V+ Sbjct: 177 MQGYDY-SELMKKLGVSDNTIKSGAYKDIMSGTRPMTDEEKKIMQSMIDDSYNEFVKVVA 235 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 236 TGRGMSEEQVRKIADGRIYDGRQAKENGLIDAFGYQEDALEAL 278 >gi|145639083|ref|ZP_01794691.1| protease IV [Haemophilus influenzae PittII] gi|145272055|gb|EDK11964.1| protease IV [Haemophilus influenzae PittII] Length = 576 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 280 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 339 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 340 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 399 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A+ S FS + + Q ++ Y F+ +VS+ R + Sbjct: 400 NSIKKIGVHADGVSTTEL-AKTSAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLSKT 458 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 459 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 515 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 516 DNVSLISTLLRDT 528 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 11/156 (7%) Query: 57 IERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLI 114 I++ D L++ L+ G A + I AI K+ KPVI + YL Sbjct: 57 IQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIVYADNYSQGQYYLA 116 Query: 115 SCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 S A I + + +GS+ G+ + Y K LDKL V+ + K+ PF ++ Sbjct: 117 SFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEPFLRND 172 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 ++ +A MQ + ++ +V VSE+RNI D L Sbjct: 173 MSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 208 >gi|327439223|dbj|BAK15588.1| periplasmic serine protease [Solibacillus silvestris StLB046] Length = 336 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 23/235 (9%) Query: 25 FSWSSHVE--DNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATAL 69 ++ S VE D + +A + + G I+D Q +E+++ + DD+ + Sbjct: 46 LTYESVVETGDLTNRIAHLTVDGVIQDVGEPSIWETVDYNHQLFMEQLDAVLEDDTIKGV 105 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++S+++PGG E I++ + K+K K P+ + MAAS GY IS ++ I A + Sbjct: 106 VLSVNTPGGGVIESEEIYQKLLKIKEEKQIPIYVSMGSMAASGGYYISAPADKIFAQRET 165 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP---KAVQMMQDVVDS 184 + GSIGV+ Q + GV +++KS K F V P + + M+Q+++D Sbjct: 166 ITGSIGVIMQSINYGKLAENFGVEFETIKSGEHK---DMFGGVRPSTKEELAMLQEMIDE 222 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 SY FV ++ RN+ + ++DGR+ G +A + GL+D +G +E +L A Sbjct: 223 SYEHFVDIIEAGRNMSEAQVKKVADGRVLGGTQALRAGLVDEIGNEEATVNALRA 277 >gi|75907910|ref|YP_322206.1| signal peptide peptidase A [Anabaena variabilis ATCC 29413] gi|75701635|gb|ABA21311.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Anabaena variabilis ATCC 29413] Length = 273 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + ++E ++ + + AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIASGTRKRVLEALKTVE-EKKFPALLLRIDSPGGTVGDSQEIYSALKRLR 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 EKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ ++Q+++D+SY FV+ V+E R++ +K +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTEPEQDILQELIDTSYQQFVQTVAEGRSLAVEKVKSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A ++G++D +G +EE Sbjct: 191 GQQALELGVVDRLGTEEE 208 >gi|257452656|ref|ZP_05617955.1| protease IV [Fusobacterium sp. 3_1_5R] gi|317059195|ref|ZP_07923680.1| protease IV [Fusobacterium sp. 3_1_5R] gi|313684871|gb|EFS21706.1| protease IV [Fusobacterium sp. 3_1_5R] Length = 564 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 14/229 (6%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 YFS ++A + + G IED ++ ++ I +D + +I+ ++SPGGSA Sbjct: 290 YFSLVKMKTRPKNYLALLNLEGTIEDETLFLDEVKAIQKDQNVKGIILRINSPGGSALVA 349 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++ A++K++ + PV + AAS GY ++ A I A+ S+ GSIGV+ P Sbjct: 350 DTMYHAVKKLREKIPVYVSISGTAASGGYYVAAAGEKIFASPLSVTGSIGVVSMIPNFSN 409 Query: 144 FLDKLGVSIKSV---KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K V+ +S+ K + + + P SE N ++ V Y F+ +VS +RNI Sbjct: 410 LEKKANVTTESISKGKYADLYSYLQPLSEENYNRIREGNLGV---YQDFLEVVSSNRNIK 466 Query: 201 ---YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 DK L+ GR+W G EAK+ GLID +GG E ++YAL D+ + Sbjct: 467 KDFLDKN--LAQGRVWLGIEAKENGLIDELGGLE---ATIYALEQDKKL 510 >gi|15615760|ref|NP_244064.1| proteinase IV [Bacillus halodurans C-125] gi|14548271|sp|Q9K809|SPPA_BACHD RecName: Full=Putative signal peptide peptidase sppA gi|10175821|dbj|BAB06917.1| proteinase IV [Bacillus halodurans C-125] Length = 331 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 110/199 (55%), Gaps = 3/199 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAA 108 ++ ++++E+ D + +I+ +++PGG I + ++++ + KPV + MAA Sbjct: 85 RDFLKQLEKAGEDPNIAGIILQVNTPGGGVLESAEIHKQVEEIVQDSEKPVYVSMGNMAA 144 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS + I A ++ GSIGV+ Q + + LG+ + KS P K S Sbjct: 145 SGGYYISAPATKIYAHPQTITGSIGVIMQSIDISGLAENLGIEFNTFKSGPYKDILSQTR 204 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 EV + ++Q +VD Y FVR++ + R + + L+DGRI+TG++A GL+D +G Sbjct: 205 EVTDEEEDILQTLVDEMYDEFVRVIVDGRGMSETEVRELADGRIYTGSQAVATGLVDELG 264 Query: 229 GQEEVWQSLYA-LGVDQSI 246 G ++V +S+ LG D ++ Sbjct: 265 GLDDVIESMKEDLGADYNV 283 >gi|123966585|ref|YP_001011666.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9515] gi|123200951|gb|ABM72559.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9515] Length = 269 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 114/197 (57%), Gaps = 4/197 (2%) Query: 37 HVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I I S + I+ +++I D ALI+ + SPGG+ + I+ AI++++ Sbjct: 12 RMARIVIDEPITSSTRVSVIKALKQIE-DREFPALILRIDSPGGTVGDSQEIYSAIKRLR 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V+ ++AS G I ASN IVA ++ GSIGV+ + + L+K+G+ + Sbjct: 71 EKGCKVVASFGNISASGGVYIGVASNKIVANPGTITGSIGVIIRGNNLSELLNKIGIKFE 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP ++ + +++Q ++D SY F V+E R++P + +DGRI+ Sbjct: 131 TVKSGIYKDILSPDKPLSDEGREILQGLIDESYKQFTEAVAEGRDLPVEDVKKFADGRIF 190 Query: 214 TGAEAKKVGLIDVVGGQ 230 TG +AKK+GL+D +G + Sbjct: 191 TGTQAKKLGLVDEIGDE 207 >gi|332667870|ref|YP_004450658.1| signal peptide peptidase SppA, 67K type [Haliscomenobacter hydrossis DSM 1100] gi|332336684|gb|AEE53785.1| signal peptide peptidase SppA, 67K type [Haliscomenobacter hydrossis DSM 1100] Length = 594 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 9/210 (4%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 G I D + + IE I DD A+++ ++S GGSA A E I+ A+ K K KP+I + Sbjct: 325 GTIGD-KRYVSAIEDILEDDKIKAIVLRVNSGGGSALASENIWYALSKAKEAGKPLIVSM 383 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA 162 + AAS GY I+C ++ I A ++ GSIGV P ++ + +KLG+++ SVK+ P Sbjct: 384 GDYAASGGYYIACMADSIYAEPNTITGSIGVFRMVPSIEKMMANKLGITMDSVKTGPFAL 443 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + +++ + + Q + Y F++ V++ R + + ++ GR+W+G +AK++G Sbjct: 444 GLNVMQDMSEEEARRAQISTEEMYRLFIKRVADGRKMKPEAVNEIAQGRVWSGVDAKRIG 503 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 L+D +G +S LG KIKD+ Sbjct: 504 LVDKLGDLNAAIKSAAKLG------KIKDY 527 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 5/205 (2%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR-AIQKVKNRKPVITE 102 R ++ ++ + I R + DD+ +++ + +A I R AI K + + Sbjct: 75 RSKVLGVHDVADAIRRAADDDNIKGILLEPEMASLNGFASARILRQAIADFKKKGKFVVA 134 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ++ Y ++ ++ + + V G Q + K LD+LG+ ++ + K Sbjct: 135 HGKIFMRGSYYLASVADEVYINPSGYVEINGFAVQQMFYKRMLDQLGIKMQIYYAGKFKG 194 Query: 163 --EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAK 219 EP + +P+ ++ + Y F+ +++SR + + V++ G T +A Sbjct: 195 ATEPYRLEKFSPENKLQYKEFLADFYDVFLEDLAKSRKMSSAQLRSVINQGVANTPEKAV 254 Query: 220 KVGLID-VVGGQEEVWQSLYALGVD 243 + GL D V+ QE + Q LG+D Sbjct: 255 EYGLFDKVLYRQELIVQLRKKLGLD 279 >gi|145632931|ref|ZP_01788664.1| protease IV [Haemophilus influenzae 3655] gi|144986587|gb|EDJ93153.1| protease IV [Haemophilus influenzae 3655] Length = 615 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV V ++ + A S FS + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVHADGVSTTEL-ANTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKI 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRIL 247 >gi|21244537|ref|NP_644119.1| protease IV [Xanthomonas axonopodis pv. citri str. 306] gi|21110210|gb|AAM38655.1| protease IV [Xanthomonas axonopodis pv. citri str. 306] Length = 633 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDS-ATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDDVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG +E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMQEA 541 >gi|289664822|ref|ZP_06486403.1| protease IV [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 633 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG +E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMQEA 541 >gi|319940786|ref|ZP_08015125.1| hypothetical protein HMPREF9464_00344 [Sutterella wadsworthensis 3_1_45B] gi|319805668|gb|EFW02449.1| hypothetical protein HMPREF9464_00344 [Sutterella wadsworthensis 3_1_45B] Length = 602 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMA 107 D++EL++RIER + S AL++ +SSPGG A A EAI + V+ + PVI + A Sbjct: 336 DAEELVQRIERAASAPSTKALVLRISSPGGDALAAEAIREKLAAVRTKGLPVIVSMGNAA 395 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS A++ IVA +L GSIGV P L+KL + I ++S SP Sbjct: 396 ASGGYWISLAADRIVADPLTLTGSIGVFSIVPDAAAALEKLELGIGGFRTSDFADFGSPL 455 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + N +++ V +Y F L ++SR + L+ GRIW G +A + GL+D + Sbjct: 456 HKPNAAEAALLRAGVMRTYARFKDLTAQSRKKTPEAVEALAQGRIWMGTQAAQNGLVDKL 515 Query: 228 G 228 G Sbjct: 516 G 516 >gi|282164165|ref|YP_003356550.1| putative signal peptide peptidase [Methanocella paludicola SANAE] gi|282156479|dbj|BAI61567.1| putative signal peptide peptidase [Methanocella paludicola SANAE] Length = 293 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 26/244 (10%) Query: 12 YVMLSLVTLTVVYFSWS--SHVE------------DNSPHVARIAIRGQI-----ED--- 49 +V++ L+ +TV++ +++ +H + + VA I + GQ+ ED Sbjct: 21 FVVIGLLAVTVLWSAYAGITHQQVIPGSIAKAFGGGKTQKVAVIYVEGQMVADKSEDAAK 80 Query: 50 ----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 S ++++ + + D A+++ ++SPGG+ A E I I + K KPV+ + + Sbjct: 81 GSAFSSDIVKCMRAATDDPEVKAIVLRVNSPGGTPVAAEEIISQINRTKAVKPVVISMGD 140 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 MA SA Y IS +N IVA + GSIGV++ + D+LGV++ KS K S Sbjct: 141 MATSAAYYISSQANRIVANPDTFTGSIGVIWTFKNKSKAYDELGVTVYVAKSGNFKDMGS 200 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + + +++ SY FV V++ RN+ DK ++DGRI+TG AK +GL+D Sbjct: 201 EWRGLTENEKSYVNAIINESYDRFVTNVAKGRNMSVDKVKEIADGRIFTGTTAKGMGLVD 260 Query: 226 VVGG 229 +GG Sbjct: 261 DIGG 264 >gi|319651852|ref|ZP_08005977.1| signal peptide peptidase [Bacillus sp. 2_A_57_CT2] gi|317396504|gb|EFV77217.1| signal peptide peptidase [Bacillus sp. 2_A_57_CT2] Length = 336 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 123/234 (52%), Gaps = 5/234 (2%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASA 110 ++ +E + D + A+++ ++SPGG I I +++ +KPV + MAAS Sbjct: 91 FMDNLEYVKEDGTVKAIVIKVNSPGGGVVESAEIHDKIIEIQKETKKPVYISMGSMAASG 150 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY IS ++ I A+ ++ GS+GV+ Q +K GV ++KS P K SP ++ Sbjct: 151 GYYISAPADKIFASPETMTGSLGVIMQGYNYAGLAEKYGVEFVTIKSGPYKDIMSPTRDM 210 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +++Q ++D+SY FV+++SE R + + ++DGRI+ G +AK++ LID G Sbjct: 211 TDEERKILQSMIDNSYAGFVKVISEGRGLTEAQVKEIADGRIYDGRQAKELNLIDGFGYA 270 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 ++V + L D + + +N+ F + ++ ++ D + + K+ Sbjct: 271 DDVIEQLKK---DHKLDGAQVVEYTENFGFGSMFSMGARKIMGDDLEMAGMMKL 321 >gi|315303364|ref|ZP_07873981.1| putative signal peptide peptidase SppA [Listeria ivanovii FSL F6-596] gi|313628267|gb|EFR96783.1| putative signal peptide peptidase SppA [Listeria ivanovii FSL F6-596] Length = 337 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 31 VEDNSP-HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +ED P +A +++ G I+D+ E ++++E+I D+S +++ ++S Sbjct: 55 IEDAGPSKIAVLSVDGTIQDTGESSSLFGDAGYNHTFFMDQLEQIRDDESIRGVLLYVNS 114 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I ++K + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 115 PGGGVMESAQIRDKILQIKKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 174 Query: 134 VLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ Q Y Y + KLG+S ++KS K S + ++MQ ++D SY+ FV++ Sbjct: 175 VIMQGYDY-SELMKKLGISDNTIKSGTHKDIMSATRPMTEDEKKIMQSMIDDSYNEFVQV 233 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++DGRI+ G +AK GLID G QE+ +L Sbjct: 234 VASGRGMSEEQVRKIADGRIYDGRQAKANGLIDEFGYQEDALAAL 278 >gi|325924321|ref|ZP_08185865.1| signal peptide peptidase SppA, 67K type [Xanthomonas gardneri ATCC 19865] gi|325545186|gb|EGD16496.1| signal peptide peptidase SppA, 67K type [Xanthomonas gardneri ATCC 19865] Length = 632 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 10/210 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 330 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEVKAVVLRVDSPGGEVFAS 389 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 390 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 449 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 450 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 509 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ GR+W+GA+AK+ GL+D GG +E Sbjct: 510 AIDKVARGRVWSGAQAKQHGLVDAFGGMQE 539 >gi|150402249|ref|YP_001329543.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C7] gi|150033279|gb|ABR65392.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C7] Length = 307 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 111/178 (62%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + IE I+ +D + A+I+ ++SPGG A E + R I++ K V+ + M SA Sbjct: 63 NDYIEWIDDAEKDSNIKAIIIKINSPGGEVIASEKLSRKIKEASEEKVVVAYIETMGTSA 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y + +++ I+A + +LVG+IGV + + ++KLG+++ ++KS K SP + Sbjct: 123 AYQAASSTDYILAEKQALVGNIGVRMEILHYYGLMEKLGINVTTIKSGTYKDIMSPTRPM 182 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +M++ +VD SY+ FV V+E+RN+ ++TL ++DG+I++G +A+KVGL+D+ G Sbjct: 183 TEEEQKMIESIVDESYYEFVSWVAENRNMTINETLEVADGKIYSGIQAEKVGLVDMTG 240 >gi|242310759|ref|ZP_04809914.1| protease IV [Helicobacter pullorum MIT 98-5489] gi|239523157|gb|EEQ63023.1| protease IV [Helicobacter pullorum MIT 98-5489] Length = 291 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 110/208 (52%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +N +VARI ++G I S +E I + + + +++ + SPGG+ I + I++ Sbjct: 39 ENPANVARIDLKGAILQSDSFLEEITELENNPNIKGILLVIDSPGGAIAPSVEISQTIKR 98 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 +KN+KP++ AS Y+ +N IVA S++GSIGV+ V +KLG+ Sbjct: 99 IKNKKPIVAYAQGSMASGSYMAGMWANKIVANSGSMIGSIGVILNGVDVSELAEKLGIKT 158 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + +K+ K + N + +M++++++ Y FV+ V E+R + K + GRI Sbjct: 159 QILKAGIYKEAGTFMRPWNKQEEEMLRNLINEQYWLFVKEVVEARKLDIKKEKDFAQGRI 218 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + A K+GLID VGG E +L+ L Sbjct: 219 LSANNALKLGLIDSVGGIYEAQNTLFEL 246 >gi|289667892|ref|ZP_06488967.1| protease IV [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 583 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 281 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 340 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 341 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 400 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 401 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 460 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG +E Sbjct: 461 AIDKVARGRVWSGAQAKERGLVDAFGGMQEA 491 >gi|299822749|ref|ZP_07054635.1| signal peptide peptidase SppA [Listeria grayi DSM 20601] gi|299816278|gb|EFI83516.1| signal peptide peptidase SppA [Listeria grayi DSM 20601] Length = 338 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 120/221 (54%), Gaps = 16/221 (7%) Query: 33 DNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGG 78 D +A +++ G I+D+ E + ++++I D S +++ ++SPGG Sbjct: 59 DGDARIAVLSVDGTIQDTGEASSLFGSSGYNHAAFMRQLKQIEADKSVKGILMYVNSPGG 118 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 I + ++K ++ PV + MAAS GY IS A++ I A++ +L GS+GV+ Sbjct: 119 GVMESAQIRDKLLEIKKKRKLPVYVSMGSMAASGGYYISTAADKIFASKETLTGSLGVIM 178 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q + K+G+S ++KS K S + + ++MQ +++ SY FV +++ Sbjct: 179 QGYDYSGLMKKVGISDNTIKSGAHKDIMSSSRPMTKEEKKIMQQMINDSYDEFVNVIATG 238 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R++ +K ++DGR++ G +AKK+GLID G +E+ ++L Sbjct: 239 RHMSKEKVRKIADGRVYDGRQAKKIGLIDQFGYKEDAIRAL 279 >gi|326424138|ref|NP_761927.2| signal peptide peptidase SppA, 67K type [Vibrio vulnificus CMCP6] gi|319999523|gb|AAO11454.2| signal peptide peptidase SppA, 67K type [Vibrio vulnificus CMCP6] Length = 616 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 15/221 (6%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE--------LIERIERISR-DDSATA 68 + Y+ + + + DN + +A + G I D Q+ + + R +R DD A Sbjct: 307 ISYYDYRATMHDNFDVNADDIAVVVASGTIMDGQQPRGTVGGDTVAGLLRQARNDDKVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I +Q +K+ KP++ + +AAS GY IS +++ I+A T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEVQALKDAGKPIVVSMSSLAASGGYWISMSADKIIAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + +KLG+ V +SP E + ++ A Q Q ++ Y Sbjct: 427 LTGSIGIFSVITTFEKGFNKLGIYTDGVGTSPFSGEGIS-TGLSKGASQAFQMGIEHGYQ 485 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LV ++R++ D ++ GR+WTG +A + GL+D +G Sbjct: 486 RFISLVGDNRDLSLDAVDKVAQGRVWTGYDALQHGLVDQIG 526 >gi|73662359|ref|YP_301140.1| protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494874|dbj|BAE18195.1| putative protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 330 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 + + +++++ + +DDS +++++++PGG Y + I+ I+++K + K + + MA Sbjct: 82 NHEAFLKQLDNVKKDDSIKGVLLTVNTPGGGTYPSDEIYEKIKEIKQKHKKIYVHMDSMA 141 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS ++ I A ++ GSIGV+ LG+ +KS K S Sbjct: 142 ASGGYYISAPADKIYAGPQTMTGSIGVIMSSIDYSGLQKNLGIKQNVIKSGEHKDILSSS 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 E+ + ++Q V+D S++ FV +V + R++P K L+DGRI++ +AK GLID + Sbjct: 202 REMTSEERDILQSVLDDSFNRFVNIVKDGRDMPESKVRKLADGRIYSAQQAKSNGLIDEI 261 Query: 228 GGQEEVWQSL 237 G +++ ++L Sbjct: 262 GYEDQTVKAL 271 >gi|325269104|ref|ZP_08135724.1| signal peptide peptidase SppA [Prevotella multiformis DSM 16608] gi|324988491|gb|EGC20454.1| signal peptide peptidase SppA [Prevotella multiformis DSM 16608] Length = 592 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 105/185 (56%), Gaps = 7/185 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q++ + +E ++ D A+++ ++S GGSAYA E I+ I ++K +KPV+ + MAA Sbjct: 331 DAQKVCKDLEELAEDKEIKAVVLRVNSGGGSAYASEQIWHQIMELKKKKPVVVSMGGMAA 390 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP-FLDKLGVSIKSVKSSP---MKAEP 164 S Y +S ++ IVA T+L GSIG+ +P F +KLGV VK++ + Sbjct: 391 SGAYYMSAPADWIVAEPTTLTGSIGIFGMFPDASSLFAEKLGVRFDEVKTNKYAGFGTQA 450 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 PF+E + + V+ Y F V+E R + + ++ G ++TG +A+K+GL+ Sbjct: 451 RPFTE---DEMAYLTQYVNRGYRLFRHRVAEGRKMTDSQVEKIAQGHVYTGQDAQKIGLV 507 Query: 225 DVVGG 229 D +GG Sbjct: 508 DQLGG 512 >gi|159026476|emb|CAO86448.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 603 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 124/239 (51%), Gaps = 16/239 (6%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 RG+I +L + + ++ + A+++ ++SPGGSA A E I R I+++ KPVI + Sbjct: 333 RGEI-GGDKLAKELRKLQGKEEVKAVVLRINSPGGSATASEVILREIKRLDATKPVIISM 391 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY I+ I A ++ GSIGV ++ + G+ +VK+ + Sbjct: 392 GDVAASGGYWIAMGGQRIFADNDTITGSIGVFGLLLNIQKIANNNGIDWDTVKTGQLADI 451 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + NP+ +++ Q V+ Y F+ V+ R + DK ++ GR+WTG +A K+GL Sbjct: 452 STITRPKNPQELEIYQAAVNRFYDLFIETVARGRKLSPDKVRTVAQGRVWTGKDAVKIGL 511 Query: 224 IDVVGGQEEVWQSLYA-----LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 +D +GG E Q YA LG D S+++ P W +L +S+ L+ +P Sbjct: 512 VDQIGGLEVAVQ--YAAKTAELGDDWSLQEY----PRSQSWQEEL----LSNFLQTYLP 560 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 17/220 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---QELIERIERISRDDSATALIV-SLSS 75 +V+ F+ ++++ D P + ++ G+ + +++I IE+ + DD+ L++ + Sbjct: 50 SVLVFNLATNISDAPPSSSLADSLTGESRTTLNLRQVIAAIEKAALDDNIVGLLLYGRDN 109 Query: 76 PGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI- 132 G YA + +A+ K + K +I E YL S A +I+ + VG + Sbjct: 110 IGEYGYATLTEVRQALAKFRQSGKKIIAYDMEWTEKEYYLASVAETVII----NPVGRME 165 Query: 133 --GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHW 188 G+ Q + L+K GV ++ VK K P++ +++ + Q +Q ++D+ + Sbjct: 166 INGLSSQQTFFADALEKYGVGVQVVKVGSFKGAVEPYTRQDLSVQNRQQLQTLLDTIWSN 225 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVV 227 + V++SRN+ + +SD + I AKK G +D V Sbjct: 226 YSSTVAKSRNLTPQQVQTISDTQGILEATTAKKAGFVDEV 265 >gi|224499759|ref|ZP_03668108.1| hypothetical protein LmonF1_08734 [Listeria monocytogenes Finland 1988] Length = 283 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|254824356|ref|ZP_05229357.1| peptidase [Listeria monocytogenes FSL J1-194] gi|255520878|ref|ZP_05388115.1| hypothetical protein LmonocFSL_06586 [Listeria monocytogenes FSL J1-175] gi|293593590|gb|EFG01351.1| peptidase [Listeria monocytogenes FSL J1-194] Length = 337 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|47093447|ref|ZP_00231211.1| peptidase, U7 family [Listeria monocytogenes str. 4b H7858] gi|47018175|gb|EAL08944.1| peptidase, U7 family [Listeria monocytogenes str. 4b H7858] gi|328465083|gb|EGF36357.1| hypothetical protein LM1816_12752 [Listeria monocytogenes 1816] Length = 337 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|228472447|ref|ZP_04057209.1| signal peptide peptidase SppA, 67K type [Capnocytophaga gingivalis ATCC 33624] gi|228276132|gb|EEK14879.1| signal peptide peptidase SppA, 67K type [Capnocytophaga gingivalis ATCC 33624] Length = 596 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 9/205 (4%) Query: 38 VARIAIRGQIEDSQ--------ELIERIERISRDDS-ATALIVSLSSPGGSAYAGEAIFR 88 +A I G+I D Q E I + R +R+D A+++ ++SPGGS A E I R Sbjct: 308 IAVIFCDGEIIDGQSTAGRVGHETIIKALRDAREDKRVKAIVLRVNSPGGSGLASELIHR 367 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + +KPV + +AAS GY ISC + I A +L GSIGV P + + Sbjct: 368 EIGLTQKKKPVYASMGNVAASGGYYISCNATRIFADRQTLTGSIGVFGVVPNLSELTQRW 427 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + V + P S F + K Q++ + +++ Y FV+ V++ R++ +++ L+ Sbjct: 428 GIHSQQVSTHPYALSYSLFEKTPEKTRQVITEGIEAFYKKFVQRVADGRHMSWEEVDALA 487 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 GR+WTG EA + GL+D +G E Sbjct: 488 QGRVWTGQEALEKGLVDEIGSLRET 512 >gi|16330327|ref|NP_441055.1| protease IV [Synechocystis sp. PCC 6803] gi|2499882|sp|P73689|SPPA_SYNY3 RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV homolog; AltName: Full=Signal peptide peptidase gi|1652816|dbj|BAA17735.1| protease IV [Synechocystis sp. PCC 6803] Length = 610 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 9/213 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSP 76 +W + D P +A + + G I + + E I I +DD A+++ ++SP Sbjct: 309 NWETENHDQDPKIAIVYLEGSIVNGRGTWENIGGDRYGELLRTIRQDDDIKAVVLRINSP 368 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA A + I+R ++ ++ +KPVI + +AAS GY I+ A IVA ++ GSIGV Sbjct: 369 GGSASAADIIWREVELLQAQKPVIISMGNVAASGGYWIATAGEKIVAQPNTVTGSIGVFS 428 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LG++ V + + S + + Q VD Y F+ V + Sbjct: 429 ILFNVENLGDRLGLNWDEVATGELANVGSSIKPKTELELAIFQRSVDQVYEIFLDKVGRA 488 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 RN+ ++ GR+WTG A+KVGL+D +GG Sbjct: 489 RNLSPTALDSVAQGRVWTGLAAQKVGLVDQLGG 521 >gi|94677025|ref|YP_588883.1| protease 4 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220175|gb|ABF14334.1| signal peptide peptidase SppA, 67K type [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 618 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 24/254 (9%) Query: 32 EDNSPHVARIAI---RGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 + N+ H A+IA+ G I + QE + +I D + ALI+ ++SPGGS Sbjct: 327 QKNTLHSAQIAVIFVDGTITNEQERPGLVNCDKIAFQIRNACLDPNVKALILRVNSPGGS 386 Query: 80 AYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E I ++ +N KP++ + MAAS GY IS NII+A+ +++ GSIG+ Sbjct: 387 VNASEIIRAELETTRNANKPIVISMGGMAASGGYWISTPGNIIIASPSTITGSIGIFGIV 446 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ LD +G+ V +SP+ A S ++ + MMQ V++ Y+ FV LV++SRN Sbjct: 447 HTIENLLDYVGIHADGVATSPI-AGTSITKKLPAELSTMMQLNVENGYNNFVSLVAQSRN 505 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + ++ G IW G++A K GL+D +G ++ V Q+ K+ + K Sbjct: 506 KTISEIEKIAQGHIWIGSDALKKGLVDKLGDFDD--------AVSQA-AKLANLKQYKLN 556 Query: 259 WFCDLKNLSISSLL 272 W+ D NL IS+LL Sbjct: 557 WYIDDVNL-ISALL 569 >gi|311031314|ref|ZP_07709404.1| signal peptide peptidase SppA, 36K type [Bacillus sp. m3-13] Length = 336 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 124/227 (54%), Gaps = 5/227 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEM 106 + ++ + +++ DD+ +IV +++PGG I + + ++K KP+ + M Sbjct: 87 NHRQFLRMLDQAKEDDTVQGIIVRVNTPGGGVSESAEIHKRLVEIKEETEKPIYISMGTM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+ +N I A+ ++ GSIGV+ Q +K GV ++KS P K SP Sbjct: 147 AASGGYYIAAPANKIFASPETITGSIGVIMQGINYSELAEKYGVKFDTIKSGPYKDIMSP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +++ + Q++Q +VD+ Y FV+++ + R + + ++DGRI+ G +AK + ++D Sbjct: 207 TKDMSEEERQILQSMVDNMYDQFVKVIVDGRGMSESEVRRIADGRIYDGQQAKDINIVDE 266 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +G E+V + A+ D + ++ +N + L ++++ SLL+ Sbjct: 267 LGYFEDVIE---AMKKDHEMGNVQVVQYTENLGWGSLFSMNVQSLLK 310 >gi|37679336|ref|NP_933945.1| protease IV [Vibrio vulnificus YJ016] gi|37198079|dbj|BAC93916.1| protease IV [Vibrio vulnificus YJ016] Length = 626 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 15/221 (6%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE--------LIERIERISR-DDSATA 68 + Y+ + + + DN + +A + G I D Q+ + + R +R DD A Sbjct: 317 ISYYDYRATMRDNFDANADDIAIVVASGTIMDGQQPRGTVGGDTVAGLLRQARNDDKVKA 376 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I +Q +K+ KP++ + +AAS GY IS +++ I+A T+ Sbjct: 377 VVLRVDSPGGSAFASEVIRNEVQALKDAGKPIVVSMSSLAASGGYWISMSADKIIAQPTT 436 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + +KLG+ V +SP E + ++ A Q Q ++ Y Sbjct: 437 LTGSIGIFSVITTFEKGFNKLGIYTDGVGTSPFSGEGIS-TGLSKGASQAFQMGIEHGYQ 495 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LV ++R++ D ++ GR+WTG +A + GL+D +G Sbjct: 496 RFISLVGDNRDLSLDAVDKVAQGRVWTGYDALQHGLVDQIG 536 >gi|197334260|ref|YP_002156464.1| signal peptide peptidase SppA, 67K type [Vibrio fischeri MJ11] gi|197315750|gb|ACH65197.1| signal peptide peptidase SppA, 67K type [Vibrio fischeri MJ11] Length = 618 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 100/175 (57%), Gaps = 2/175 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD A+++ + SPGGSA+A E I I +K KPV+ + +AAS GY IS +++ I Sbjct: 363 DDKVKAVVLRVDSPGGSAFASEVIRNEIDALKEAGKPVVVSMSSVAASGGYWISASADKI 422 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A T++ GSIG+ + L+K+G+ + +SP +N Q+MQ Sbjct: 423 IAQPTTITGSIGIFGILTTFEKGLEKMGIHSDGISTSPFNG-VGITRPLNDDVAQVMQLG 481 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ YH F++LVS+ RN+ + ++ GR+WTG +A K GL+D +G ++ Q+ Sbjct: 482 IEHGYHRFIKLVSDHRNLSLEAVDKVAQGRVWTGKDALKHGLVDQLGDFDDAVQA 536 >gi|16803625|ref|NP_465110.1| hypothetical protein lmo1585 [Listeria monocytogenes EGD-e] gi|224501475|ref|ZP_03669782.1| hypothetical protein LmonFR_02992 [Listeria monocytogenes FSL R2-561] gi|254831986|ref|ZP_05236641.1| hypothetical protein Lmon1_11555 [Listeria monocytogenes 10403S] gi|284801977|ref|YP_003413842.1| hypothetical protein LM5578_1732 [Listeria monocytogenes 08-5578] gi|284995119|ref|YP_003416887.1| hypothetical protein LM5923_1684 [Listeria monocytogenes 08-5923] gi|16411014|emb|CAC99663.1| lmo1585 [Listeria monocytogenes EGD-e] gi|284057539|gb|ADB68480.1| hypothetical protein LM5578_1732 [Listeria monocytogenes 08-5578] gi|284060586|gb|ADB71525.1| hypothetical protein LM5923_1684 [Listeria monocytogenes 08-5923] Length = 337 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|226224186|ref|YP_002758293.1| protease [Listeria monocytogenes Clip81459] gi|254931525|ref|ZP_05264884.1| peptidase [Listeria monocytogenes HPB2262] gi|225876648|emb|CAS05357.1| Putative protease [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583079|gb|EFF95111.1| peptidase [Listeria monocytogenes HPB2262] gi|332312027|gb|EGJ25122.1| Putative signal peptide peptidase sppA [Listeria monocytogenes str. Scott A] Length = 337 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 130/245 (53%), Gaps = 21/245 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWN 253 R + ++ ++DGRI+ G +AK+ GLID G QE+ +L AL +Q + + ++ Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQED---ALEALKKEQGLADATVIQYD 293 Query: 254 PPKNY 258 P+N+ Sbjct: 294 TPENF 298 >gi|300871688|ref|YP_003786561.1| periplasmic serine proteases ClpP class [Brachyspira pilosicoli 95/1000] gi|300689389|gb|ADK32060.1| periplasmic serine proteases ClpP class [Brachyspira pilosicoli 95/1000] Length = 277 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 22/240 (9%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 HVAR G E S ++LI+ E +DD+ A+++ + SPGG+ + E + +Q++K Sbjct: 7 HVARKNSLGIEEKSVTEKLIDDFEYYMKDDNVKAIVLQVDSPGGALTSCEEALKYLQELK 66 Query: 95 NR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + KP++ MAAS GY IS ++ I A E++L GSIGV+ Q+ V +DK G+ + Sbjct: 67 KKYPKPIVASFRSMAASGGYYISMIADKIYANESTLTGSIGVISQFVNVSSLMDKYGIKM 126 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV----LS 208 ++KS K SPF E + QD+ F +V +R DK L Sbjct: 127 YTIKSGRNKDSLSPFREPREDELAYWQDMTYEFVAQFTNVVETARG---DKIKGNREDLF 183 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP-----PKNYWFCDL 263 DGR+++G A +VGLID +G ++ A+ + +IKD P P+N F +L Sbjct: 184 DGRVFSGKRALEVGLIDNIGTLKD------AIKDAAEMAEIKDEEPYIIKRPENKNFINL 237 >gi|254992106|ref|ZP_05274296.1| hypothetical protein LmonocytoFSL_02749 [Listeria monocytogenes FSL J2-064] Length = 337 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 120/222 (54%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVHKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|291276786|ref|YP_003516558.1| protease [Helicobacter mustelae 12198] gi|290963980|emb|CBG39819.1| protease [Helicobacter mustelae 12198] Length = 286 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 123/235 (52%), Gaps = 3/235 (1%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+ K K +L +V L +F + + ++A+I + G I DS + E+I++I Sbjct: 14 FITKYFKACIFLLIIVLL---FFFLHNDGGQKNANLAKIYLHGPIIDSTSIYEQIKKIKA 70 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + + ++ ++SPGG+ A I I+++ R PV+ V + AS Y S I Sbjct: 71 NPNIKGALLLINSPGGAVSASVEISDMIRELNQRIPVVAYVQGVMASGSYYGGMYSKQIF 130 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A +L+GSIGV+F ++ + K+GVS + V + K +P + P+ +++++ Sbjct: 131 ANRGALIGSIGVIFSSMNIQNLMQKIGVSQQGVSAGAYKEVGTPLRKWTPEEYAYIKNLI 190 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Y F+ VS++R + ++G+I+T A+K+GLID +GG ++ ++L Sbjct: 191 QEEYQMFIDDVSDARKLDKHNYKSFAEGKIFTAKNAQKLGLIDEIGGMDDAIEAL 245 >gi|310767792|gb|ADP12742.1| protease 4 [Erwinia sp. Ejp617] Length = 618 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 14/215 (6%) Query: 27 WSSHVEDNSP---HVARIAIRGQIEDSQELIERIE--------RISR-DDSATALIVSLS 74 + V+DN +VA I G I D +E + R +R D A++ ++ Sbjct: 314 YDYQVKDNGSSDGNVAVILANGAIMDGEEAPGSVGGDTTALEIRAARLDPKIKAIVFRVN 373 Query: 75 SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGGS A E I + K KPV+ + MAAS GY +S +N I+A+ +L GSIG Sbjct: 374 SPGGSVTASETIREELAAAKEAGKPVVVSMGGMAASGGYWVSTPANYIIASPNTLTGSIG 433 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + V+ LD +GV V +SP+ A+ + + P+ QMMQ +D Y F+ LV Sbjct: 434 IFGVINTVESSLDAIGVHTDGVATSPL-ADVASTKALPPEVQQMMQLSIDKGYQNFIGLV 492 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++SRN ++ ++ G +WTG++AK GLID +G Sbjct: 493 AKSRNKTSEEIDKIAQGHVWTGSDAKAKGLIDALG 527 >gi|226227952|ref|YP_002762058.1| protease IV [Gemmatimonas aurantiaca T-27] gi|226091143|dbj|BAH39588.1| protease IV [Gemmatimonas aurantiaca T-27] Length = 638 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 3/186 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 GQI + L + ++ D +L++ ++SPGGS A E I R + + +KPV+ + Sbjct: 360 GQI-GGEALSRELRKVRNDAKVKSLVLRVNSPGGSVIASERIQRELALINAKKPVVVSMG 418 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY IS AS I A ++ GSIGV P VK ++ GV+ +VK+ A+ Sbjct: 419 SLAASGGYWISTASRQIFAEPNTITGSIGVFAIVPNVKGLANRHGVTFDTVKTG-RYADI 477 Query: 165 SPFSEVNPKA-VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S +A + ++Q D+ Y F+ V++SR +P D +++GR+W+GA+A ++GL Sbjct: 478 LTLSRPRTEAELAVLQRGTDAVYDAFIARVAQSRRLPVDSVRAIAEGRVWSGAQALRLGL 537 Query: 224 IDVVGG 229 +D +GG Sbjct: 538 VDSLGG 543 >gi|84622191|ref|YP_449563.1| protease IV [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366131|dbj|BAE67289.1| protease IV [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 633 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 541 >gi|305665196|ref|YP_003861483.1| putative protease IV [Maribacter sp. HTCC2170] gi|88709948|gb|EAR02180.1| putative protease IV [Maribacter sp. HTCC2170] Length = 586 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 105/184 (57%), Gaps = 1/184 (0%) Query: 50 SQELIERIERISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 Q +I R +RDD A+++ + SPGGSA + I+R ++ K +KPV+ + +AA Sbjct: 323 GQGIISRALVKARDDDRVKAIVLRVDSPGGSALTSDIIWREVELAKAKKPVVVSMGNVAA 382 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ ++ I A T++ GSIGV P V +G++ + V ++ + S F Sbjct: 383 SGGYYIAAGADKIFAEPTTITGSIGVFGTIPNVNELAADIGINAEQVGTNKNSVDYSLFE 442 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +++Q+ ++ +Y F+ VS+ RNI + ++ GR+W+G +AKK+GLID +G Sbjct: 443 PMTENFRKVVQEGIEETYETFLDRVSKGRNISIAEADSMAQGRVWSGVDAKKLGLIDELG 502 Query: 229 GQEE 232 ++ Sbjct: 503 NMDD 506 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 15/192 (7%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRKPVI 100 GQ + E++ I ++++DDS I +S AG +AI +A++ K I Sbjct: 72 GQAQGLDEVLHAI-KVAKDDSD---IKGISISNNFIMAGLAQTQAIRKALKDFKESGKFI 127 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + Y ++ S+ I + G+ + + K DK GV ++ ++ Sbjct: 128 YTYSDFYMQKDYYLASVSDSIFLNPVGGLDFKGLSTEVLFYKDLQDKTGVKMEVIRHGKY 187 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTG 215 K+ PF +E++ +++++ S + V +SE RN+ + +++D GR+ Sbjct: 188 KSAVEPFLANEMSDANRTQIKELISSLWDTMVADISEGRNLSVENVNIIADTLGGRLPKY 247 Query: 216 AEAKKVGLIDVV 227 A A GLID V Sbjct: 248 AVAS--GLIDGV 257 >gi|237654702|ref|YP_002891016.1| signal peptide peptidase SppA, 67K type [Thauera sp. MZ1T] gi|237625949|gb|ACR02639.1| signal peptide peptidase SppA, 67K type [Thauera sp. MZ1T] Length = 613 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 14/210 (6%) Query: 33 DNSPH----VARIAIRGQIEDSQE--------LIERIERISRDD-SATALIVSLSSPGGS 79 D++ H VA I +G I D E R+ R +R+D AL++ + SPGGS Sbjct: 314 DDTRHAAGSVAVIVAQGTIVDGAEPAGVVAGDTFARLIREAREDEDIKALVLRIDSPGGS 373 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I R ++ + KPVI + +AAS GY I+ ++ I AA +++ GSIG+ + Sbjct: 374 AWASELIRRELELTRQAGKPVIASMSSVAASGGYWIATGADEIWAAPSTVTGSIGIFGLF 433 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P L +LG+ + V ++P+ P ++P A + MQ ++ Y F+ +V+++R Sbjct: 434 PEFSEPLRRLGIGVDGVATAPLAGALDPRRPLDPAAAEAMQLGIEHGYRRFLEVVAQARK 493 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + ++ GR+WTG A +GL+D +G Sbjct: 494 LTVAEVDAVARGRVWTGEAASGLGLVDKLG 523 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 59 RISRDDSA-TALIVSLSSPGGSAYAGEAIFRA-IQKVK-NRKPVITEVHEMAASAGYLIS 115 R +RDD+ AL++ G ++ A RA I K + KPV+ S YL S Sbjct: 97 RKARDDARIAALVIETDELVGGGFSKLAELRAAIADFKASGKPVLARGERFTQSQYYLAS 156 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPK 173 A + ++ + V G+ Y + LDKLGV + + K+ PF S+++ + Sbjct: 157 VADELHLSPD-GFVLLRGLARYGTYFRDALDKLGVKVHVFRVGEYKSFSEPFTRSDMSDE 215 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNI 199 + +D++D + + ++ SR + Sbjct: 216 DREATRDLLDGLWRFMRDDIAASRKL 241 >gi|255021332|ref|ZP_05293380.1| Protease IV [Acidithiobacillus caldus ATCC 51756] gi|254969195|gb|EET26709.1| Protease IV [Acidithiobacillus caldus ATCC 51756] Length = 611 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 1/184 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAA 108 ++ + +++ + +D + A+++ +SSPGG EAI +AI ++ K KPV+ + + A Sbjct: 341 TEPTVAQLDALRKDKAVKAVVLQVSSPGGDVTTAEAIRKAILRLRKAGKPVVVSMGSLGA 400 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y +S ++ I A T++ IGV +P L KLG+++ V A PSP Sbjct: 401 SGAYWLSTGADEIFAEPTTITADIGVFMLFPDYSGTLHKLGITVSGVSMPAGGAHPSPMM 460 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + Q VVD YH FV LV+ +R++P+ + + GR W+G A +GL++ +G Sbjct: 461 PLTDSEQKAYQAVVDYLYHHFVSLVATARHLPFAQAEKDAQGRAWSGIAAYHMGLVNQLG 520 Query: 229 GQEE 232 G +E Sbjct: 521 GLQE 524 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 3/153 (1%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 L+ I+ ++D L ++LS GGS + + +A+Q + I + Sbjct: 88 HRLVRAIDAAAKDPHIRLLELNLSDFGGGSITQLQTVAKALQTFRASGKPIYAFAPNYSQ 147 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ +N I +V G + Y K F DK+GV + S + K+ P Sbjct: 148 ASYFLAAQANQIFLPHLGVVLFTGFTTKGLYFKDFFDKIGVRVYSFRQGKYKSAMEPLIR 207 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 ++++ A + ++ + +H + +++ R+IP Sbjct: 208 NDMSAAAREENEEWLRVWWHSYAEGIAQGRHIP 240 >gi|58580196|ref|YP_199212.1| protease IV [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424790|gb|AAW73827.1| protease IV [Xanthomonas oryzae pv. oryzae KACC10331] Length = 642 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 340 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 399 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 400 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 459 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 460 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 519 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 520 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 550 >gi|15839274|ref|NP_299962.1| protease IV [Xylella fastidiosa 9a5c] gi|9107924|gb|AAF85482.1|AE004074_6 protease IV [Xylella fastidiosa 9a5c] Length = 633 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 6/178 (3%) Query: 59 RISRD-DSATALIVSLSSPGGSAYAGEAIFR---AIQKVKNRKPVITEVHEMAASAGYLI 114 R +RD D+ A+++ ++SPGG +A E I R A++KV KPV+ + +MAAS GY I Sbjct: 365 RKARDEDAVKAVVLRVNSPGGEVFASEQIRREVVALRKVG--KPVVVSMGDMAASGGYWI 422 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S ++ I A +++ GSIG+ P + LDK+GV V ++ ++P+ Sbjct: 423 SMDADRIYADPSTISGSIGIFGLMPNITRTLDKMGVHTDGVGTTRFAGALDITRTLDPQV 482 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 QM+Q+V+D Y F V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 483 GQMLQNVIDKGYADFTSKVAQARHRSVQEIDSIARGRVWSGAQAKERGLVDELGGVRE 540 >gi|323495030|ref|ZP_08100119.1| protease IV [Vibrio brasiliensis LMG 20546] gi|323310687|gb|EGA63862.1| protease IV [Vibrio brasiliensis LMG 20546] Length = 616 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I ++ +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +++ IVA T+L GSIG+ + L+KLG+ V +SP ++ + ++ A Sbjct: 415 MSADRIVAQPTTLTGSIGIFSVLTTFEKGLNKLGIYTDGVGTSPF-SDVGVTTGLSDGAS 473 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q Q ++ Y+ F+ LVS+SR IP ++ ++ GR+WTG +A + GL+D +G Sbjct: 474 QAFQMGIEHGYNRFIGLVSQSREIPLEQVDNVAQGRVWTGQDALEFGLVDKIG 526 >gi|300864377|ref|ZP_07109249.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] gi|300337603|emb|CBN54395.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] Length = 601 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 9/208 (4%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ +A I G I D + + + + + +++ A+++ ++SPGGSA A Sbjct: 310 DDKKQIAVIYAEGDIVDGEGSPTQVGGDRIAKELRELRENENVKAVVLRVNSPGGSATAS 369 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R + + +KPVI + +AAS GY IS +N I A ++ GSIGV + Sbjct: 370 EVIGREVVLTRKKKPVIVSMGNLAASGGYWISMNANRIFAEPNTITGSIGVFGLLMNAQR 429 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + G+S +VK+ + P+ + +Q VVD Y F + V++SR +P K Sbjct: 430 LANNNGISWDTVKTGRYADSETISRPKTPQELANIQRVVDRIYDRFTQKVAQSRKLPLAK 489 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ GR+W+G+ AK++GL+D +GG E Sbjct: 490 VQEIAQGRVWSGSAAKQLGLVDEIGGIE 517 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 52/244 (21%), Positives = 106/244 (43%), Gaps = 18/244 (7%) Query: 21 TVVYFSWSSHVEDNSPHV----ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSP 76 +V+ S ++ D+ P+ A R + +++ +E +D L + S+ Sbjct: 50 SVIVLDLSLNITDSKPNTTIGEALSEDRSDTMTLRSVLDALETAKKDPKIVGLYLQGSAD 109 Query: 77 GGS-AYAG-EAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI- 132 GS +A + I A+Q K++KP+ + YL S A+ I V + +G + Sbjct: 110 SGSTGWANLKEIRLALQNFQKSKKPIFAYDMDWTEREYYLGSVANTIAV----NPLGGVE 165 Query: 133 --GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHW 188 G + ++ L+K G+ ++ + K+ PF +++P+ Q + + + Sbjct: 166 INGFSSEQMFLSGALEKFGIGVQVTRVGKYKSAVEPFLLKKMSPENRQQTEQWLGDIWSE 225 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSI 246 F+ V+++R + + ++D R EA LID V +E+ L L G+D+ Sbjct: 226 FLNTVTQNRKLKTSQLQAIADNRGTLMADEALNSKLIDKVAYFDEIVAELKKLTGIDREN 285 Query: 247 RKIK 250 + K Sbjct: 286 KSFK 289 >gi|147918877|ref|YP_687397.1| putative protease IV [uncultured methanogenic archaeon RC-I] gi|110622793|emb|CAJ38071.1| putative protease IV [uncultured methanogenic archaeon RC-I] Length = 299 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 106/192 (55%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S E++ I + + DDS A+++ ++SPGG+ A E I I + K +KPVI + + A S Sbjct: 89 SSEVVRAIRKATADDSIKAIVLRVNSPGGTPVAAEEIIAQINRTKAKKPVIVSMGDSATS 148 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A Y +S +++ I A + GSIGV++ + + ++ G++ KS K + + Sbjct: 149 AAYYVSASADKIFANPDTFTGSIGVIWVFKNKTRYYNEEGINFYIAKSGNYKDVGADWRG 208 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ +Q +++ SY FV V+ RN+P ++ ++DGR+ TG AK +GL+D +GG Sbjct: 209 LSENEKSYIQSIINESYERFVTAVATGRNLPENQIRAIADGRVMTGTSAKSMGLVDEIGG 268 Query: 230 QEEVWQSLYALG 241 + + LG Sbjct: 269 LYDAIEYAAKLG 280 >gi|332187455|ref|ZP_08389193.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. S17] gi|332012616|gb|EGI54683.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. S17] Length = 620 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL+V + SPGGS A E I +AI + K +K PV+ + +AAS GY +S ++II A Sbjct: 348 ALVVRVDSPGGSVLASEQIRQAILEAKRQKLPVVVSMGGLAASGGYWVSTPADIIFAEPG 407 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIG+ P + L K+GV+ VK++P+ +P P ++Q +++ Y Sbjct: 408 TITGSIGIFGLIPSFENTLAKIGVTTDGVKTTPLTGQPDVLGGFTPMLDTILQAGIENGY 467 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V++SR++ +K ++ GR+W G A+++GLID G Sbjct: 468 RQFLTRVAQSRHMTPEKVDTIAQGRVWDGGTARQIGLIDRFG 509 >gi|319776392|ref|YP_004138880.1| protease IV (signal peptide peptidase) [Haemophilus influenzae F3047] gi|317450983|emb|CBY87213.1| protease IV (signal peptide peptidase) [Haemophilus influenzae F3047] Length = 615 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%) Query: 34 NSPH-VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 N P+ +A + + G I D + + I RI R + DD S A+I+ ++SPGGSA+A Sbjct: 319 NVPNKIAVVNVEGTIIDGESDEENAGGDTIVRILRKAHDDNSVKAVILRVNSPGGSAFAS 378 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + Sbjct: 379 EIIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV+ V ++ + A+ S F + + Q ++ Y F+ +VS+ R + Sbjct: 439 NSIKKIGVNADGVSTTEL-AKTSAFFPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 498 QVDKLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTD 554 Query: 263 LKNLSISSLLEDT 275 IS+LL DT Sbjct: 555 DNVSLISTLLRDT 567 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|87201072|ref|YP_498329.1| signal peptide peptidase SppA, 67K type [Novosphingobium aromaticivorans DSM 12444] gi|87136753|gb|ABD27495.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Novosphingobium aromaticivorans DSM 12444] Length = 625 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 11/221 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSL 73 VY + +D S +A + + G+I D + + I+ +++ D L++ + Sbjct: 298 VYLADKPAAKDGS-AIAVVTVAGEIVDGDAGPGVAGGDRIADLIDGVTQADDYAGLVLRV 356 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGGS A E I A+++V+ + PV + +AAS GY +S + I A +++ GSI Sbjct: 357 DSPGGSVMASERIRAAVERVRAKGLPVAVSMGSVAASGGYWVSTPAQRIFAEPSTITGSI 416 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV P + L + GV+ + V+++P+ +P +NP+ +MQ V+ +Y F+ L Sbjct: 417 GVFAVLPTFEQTLPQYGVTTEQVRTTPLSGQPDLLGGLNPQVSALMQGQVEQTYTRFLGL 476 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+++R ++ GRIW G A+++GL+D GG ++ Sbjct: 477 VAKARGKSPADIDRIAQGRIWDGGTARQLGLVDQFGGLDDA 517 >gi|47096798|ref|ZP_00234380.1| peptidase, U7 family [Listeria monocytogenes str. 1/2a F6854] gi|254898248|ref|ZP_05258172.1| hypothetical protein LmonJ_00495 [Listeria monocytogenes J0161] gi|254912259|ref|ZP_05262271.1| peptidase [Listeria monocytogenes J2818] gi|254936586|ref|ZP_05268283.1| peptidase [Listeria monocytogenes F6900] gi|47014831|gb|EAL05782.1| peptidase, U7 family [Listeria monocytogenes str. 1/2a F6854] gi|258609182|gb|EEW21790.1| peptidase [Listeria monocytogenes F6900] gi|293590236|gb|EFF98570.1| peptidase [Listeria monocytogenes J2818] Length = 337 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 119/222 (53%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + ++ ++DGRI+ G +AK+ GLID G QE ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQENALEAL 278 >gi|294624143|ref|ZP_06702878.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601561|gb|EFF45563.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 633 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDS-ATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDDVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 541 >gi|294663994|ref|ZP_06729409.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606238|gb|EFF49474.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 633 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDS-ATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDDVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 541 >gi|288803512|ref|ZP_06408943.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica D18] gi|288333935|gb|EFC72379.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica D18] Length = 592 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 106/185 (57%), Gaps = 7/185 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + + +E++++D A++V ++S GG AYA E I+ I ++K KPV+ + MAA Sbjct: 331 DAQVVCKDLEKLAKDKDVKAVVVRVNSGGGDAYASEQIWHQIMELKKLKPVVVSMGGMAA 390 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKS---SPMKAEP 164 S GY +S +N IVA T++ GSIG+ + V L +KLG+ VK+ + Sbjct: 391 SGGYYMSAPANWIVAEPTTITGSIGIFGMFADVSGLLREKLGLKFDEVKTNKYADFGTRA 450 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 PF+E + + + ++ Y F V+E R + ++ ++ G ++TG +A+K+GL+ Sbjct: 451 RPFTE---EEMSYLSQYINRGYKLFRHRVAEGRKMTEEQVEKVAQGHVFTGQDAQKIGLV 507 Query: 225 DVVGG 229 D +GG Sbjct: 508 DQLGG 512 >gi|294012283|ref|YP_003545743.1| protease IV [Sphingobium japonicum UT26S] gi|292675613|dbj|BAI97131.1| protease IV [Sphingobium japonicum UT26S] Length = 632 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 1/167 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL+V + SPGGS A E I AI + K+ P++ + +AAS GY +S +++I A Sbjct: 352 ALVVRVDSPGGSVMASEKIRSAIMEAKSEGLPIVASMGNVAASGGYWVSTPADVIFAEPD 411 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P + L K+GV+ VK++P+ +P P+ ++MQ V+ Y Sbjct: 412 TITGSIGVFGILPSFEGTLAKIGVTTDGVKTTPLSGQPDIAGGTTPEFDRIMQMGVEDIY 471 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 FV LV++SR + ++ GR+W G A+++GL+D GG EE Sbjct: 472 GRFVGLVAQSRRKTPQQIDAIAQGRVWDGGTARQIGLVDRFGGLEEA 518 >gi|251772979|gb|EES53536.1| Peptidase S49 (SppA) [Leptospirillum ferrodiazotrophum] Length = 296 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 2/216 (0%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSL 73 +L ++ +FS S + + + + I G I S++ I +I ++RD A+++ + Sbjct: 19 ILFVLGRGAAFFSRSVPIVGGA-EIGVVRISGVILSSRKPIRQIRALARDPRVKAILLRI 77 Query: 74 SSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG+ + I+ + K K+ KPVI + + AS Y I+ A + I+A+ SL GSI Sbjct: 78 DSPGGAVVPSQDIYEEVMKARKSGKPVIASIGTVGASGAYYIASACDRIIASPGSLTGSI 137 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + + K+GV + +KS +K SPF + P+ +Q V+D + F+R Sbjct: 138 GVIMELAQFEDLMKKIGVQSEVMKSGSLKDAGSPFRPMTPEEKAYLQSVLDEMHRQFIRD 197 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V++ R++ L+DGR++TGA A L+D +G Sbjct: 198 VAKGRHLQVSAIEPLADGRVFTGASAIGNHLVDSLG 233 >gi|78356487|ref|YP_387936.1| signal peptide peptidase A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218892|gb|ABB38241.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 320 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 18/275 (6%) Query: 29 SHVEDNSPHVARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + V DN P RG D Q ++ R+ D + A+I+++ SPGGS + + Sbjct: 50 AGVIDNKPE------RGIFADKPGLVQSVVARLRMAEMDPAVRAVILTVDSPGGSVTSSD 103 Query: 85 AIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 ++ I + K R V+ +MA S GY +S A++ I+A +++ GSIG +F P V Sbjct: 104 VLYNEIMRFKQRTGTRVVALQMDMATSGGYYVSIAADRIIAHPSTITGSIGTIFMRPNVT 163 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 ++K+GV + KS K SPF E P+ ++Q++V + F++LVSE R + Sbjct: 164 GLMEKIGVQAVTTKSGAHKDIGSPFRENTPEEQAILQNMVTTLNSRFIKLVSERREL-QG 222 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNP-PKNYWF 260 + SD RI T EA ++GL+D +G + + + L G+D++ + P P + + Sbjct: 223 RESSYSDARIMTAQEALELGLVDSIGYFDNAVAAAHELAGLDEASVVVYRREPFPNDTPY 282 Query: 261 CDLKNLSISSLLEDTIPLMKQTKV--QGLWAVWNP 293 + + S+ L + +PL + V G + +W P Sbjct: 283 NTITAQAGSAPLVE-MPLARPLNVPSTGFYYLWAP 316 >gi|16800695|ref|NP_470963.1| hypothetical protein lin1627 [Listeria innocua Clip11262] gi|16414114|emb|CAC96858.1| lin1627 [Listeria innocua Clip11262] Length = 337 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 118/222 (53%), Gaps = 16/222 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGDDTIAVLSVDGTIQDTGDSGSLFGDAGYDHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + +K ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMSAEKVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|116328102|ref|YP_797822.1| periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331445|ref|YP_801163.1| periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120846|gb|ABJ78889.1| Periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125134|gb|ABJ76405.1| Periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 330 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 6/210 (2%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 +++E D A+I+ ++SPGGS A + +++ I + K +K PV++ + AAS Y Sbjct: 83 KQLELAELDPEIKAVILKINSPGGSVTASDILYKEILQFKAKKKIPVVSLFMDTAASGAY 142 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS A+++I+A TS+ GSIGV+ VK LDKLGV +S++S K SP +++P Sbjct: 143 YISMATDLIIAHPTSVTGSIGVILSGINVKEGLDKLGVKDQSIRSGGNKTIGSPLEDLSP 202 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQE 231 + +++Q +VD + F +V R L ++DGRI+T ++A GLID +G + Sbjct: 203 EQRKLLQSIVDDLFEKFFEVVKNGRPGKNPAELRKIADGRIFTASQALGHGLIDKIGYFD 262 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 Q AL + RK N P+ ++ Sbjct: 263 NAVQETMAL---PNYRKTPGSNSPRIIYYS 289 >gi|257067187|ref|YP_003153443.1| signal peptide peptidase SppA, 36K type [Anaerococcus prevotii DSM 20548] gi|256799067|gb|ACV29722.1| signal peptide peptidase SppA, 36K type [Anaerococcus prevotii DSM 20548] Length = 327 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 104/177 (58%), Gaps = 1/177 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 ++E ++ D +I++++SPGGS YA E I I+ +K KPV T + EMAAS G Sbjct: 81 VVEELKNAKEDPLVKGVILNVNSPGGSVYASERIANQIKALKEAEKPVYTVMGEMAASGG 140 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I A+ + GSIGV+ Q ++ +K G+ +++ + MK S +++ Sbjct: 141 YYISALTDRIYASNETWTGSIGVIIQSYSLQGLFEKYGIKEQNITTGKMKDAGSQGRDMS 200 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + Q +VDS++ FV++V+E R + + L+DGR++ G++A GL+D +G Sbjct: 201 KEEKEYFQGLVDSAFDRFVKIVAEGRGLSEREVRKLADGRVYDGSQALANGLVDKIG 257 >gi|254413026|ref|ZP_05026798.1| signal peptide peptidase SppA, 36K type [Microcoleus chthonoplastes PCC 7420] gi|196180190|gb|EDX75182.1| signal peptide peptidase SppA, 36K type [Microcoleus chthonoplastes PCC 7420] Length = 274 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 123/223 (55%), Gaps = 4/223 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + Q +++ ++ + + AL++ + SPGG+ + I+ A+ +++ Sbjct: 12 QIARIEITGLIAGNTRQRVLDALKTVE-EKKFPALLLRIDSPGGTVGDSQEIYSALMRLR 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + +I ++AS G + + IV ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 EKVKIIASFGNISASGGVYVGMGAEQIVTNPGTITGSIGVILRGNNLERLLDKIGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS P K E+ ++Q+++D+SY FV+ V+E+RN+ + +DGRI+T Sbjct: 131 VKSGPYKDILGFDRELTDPEKTILQEMIDTSYQQFVQTVAEARNLAVETVRSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKDWNPPK 256 G +A +G++D +G +E+ + + +G+D K + PK Sbjct: 191 GQQALDLGVVDRLGTEEDARRWAAELVGLDPEKTKCETIEEPK 233 >gi|257882224|ref|ZP_05661877.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257885419|ref|ZP_05665072.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|293568402|ref|ZP_06679723.1| signal peptide peptidase [Enterococcus faecium E1071] gi|294623115|ref|ZP_06702001.1| signal peptide peptidase [Enterococcus faecium U0317] gi|14548273|sp|Q9X480|SPPA_ENTFC RecName: Full=Putative signal peptide peptidase sppA gi|4760912|gb|AAD29142.1|AF099088_11 protease IV homolog [Enterococcus faecium] gi|257817882|gb|EEV45210.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257821275|gb|EEV48405.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|291588923|gb|EFF20750.1| signal peptide peptidase [Enterococcus faecium E1071] gi|291597484|gb|EFF28649.1| signal peptide peptidase [Enterococcus faecium U0317] Length = 344 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 1/190 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMA 107 + Q + ++++I D + +++ ++SPGG Y I + + K+K P+ T A Sbjct: 89 NHQNFLTQLKKIQEDKAVKGVLLEVNSPGGGIYESAEIAKEMAKIKKLDIPIYTAFKNTA 148 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS S+ I A E + GSIGV+ L+KLGV+ + KS +K SP Sbjct: 149 ASGGYYISAGSDKIFATEETTTGSIGVIISGLNYSGLLEKLGVTDATYKSGALKDMMSPQ 208 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + + +++Q+ V S+Y FV +V++ RN+ + L+DGRI+ G +A + GL+D + Sbjct: 209 HKPSEEENKVIQEFVMSAYDRFVNVVAKGRNMDTNAVKELADGRIYDGNQAVENGLVDQI 268 Query: 228 GGQEEVWQSL 237 G E+ SL Sbjct: 269 GYSEDALDSL 278 >gi|254480343|ref|ZP_05093591.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2148] gi|214039905|gb|EEB80564.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2148] Length = 615 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 134/251 (53%), Gaps = 14/251 (5%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAA 108 + L I + + D+S A+++ +++PGGS +A E I + I +V+ N PV+ + +AA Sbjct: 346 ADSLATMISKTAADESVKAIVLRVTTPGGSMFASEIIRQQILEVRANGTPVVVSMGSIAA 405 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ A++ I A +T++ GSIGV+ +P + L + G+ V ++ + Sbjct: 406 SGGYYIAAAADEIFATKTTITGSIGVIAVFPTFENLLQRGGIYTDGVGTTSLAGSLRLDR 465 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +NP+ + +Q V +SY F+++V++ R++ D+ +++GR+W+ ++A +GL+D +G Sbjct: 466 PLNPELTKALQAGVANSYQLFLQVVADGRSMELDEVAAVAEGRVWSASDALSLGLVDQLG 525 Query: 229 GQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCDL-----------KNLSISSLLEDT 275 ++ + L I ++ P +F L ++ S+SSLL + Sbjct: 526 DLDDAINAAAGLADLDAFQIDYVEQPLSPSELFFQQLAERMGSVGLLPRSHSVSSLLNLS 585 Query: 276 IPLMKQTKVQG 286 P ++ T V G Sbjct: 586 KPYLEATGVLG 596 >gi|257466515|ref|ZP_05630826.1| protease IV [Fusobacterium gonidiaformans ATCC 25563] gi|315917670|ref|ZP_07913910.1| protease IV [Fusobacterium gonidiaformans ATCC 25563] gi|313691545|gb|EFS28380.1| protease IV [Fusobacterium gonidiaformans ATCC 25563] Length = 564 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 119/229 (51%), Gaps = 14/229 (6%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 YFS ++A + + G IED ++ ++ I +D + +I+ ++SPGGSA Sbjct: 290 YFSLVKMKTRPKNYLALLNLEGTIEDETLFLDEVKAIQKDQNVKGVILRINSPGGSALVA 349 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++ A++K++ + PV + AAS GY ++ A I A+ S+ GSIGV+ P Sbjct: 350 DTMYHAVKKLREKIPVYVSISGTAASGGYYVAAAGEKIFASPLSVTGSIGVVSMIPNFSN 409 Query: 144 FLDKLGVSIKSV---KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K V +S+ K + + + P SE N ++ V Y F+ +VS +RNI Sbjct: 410 LEKKANVVTESISKGKYADLYSYLQPLSEENYNRIREGNLGV---YQDFLEVVSSNRNIK 466 Query: 201 ---YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 DK L+ GR+W G EAK+ GLID +GG E ++YAL D+ + Sbjct: 467 KDFLDKN--LAQGRVWLGIEAKENGLIDELGGLE---ATIYALEQDKKL 510 >gi|148264332|ref|YP_001231038.1| signal peptide peptidase SppA, 36K type [Geobacter uraniireducens Rf4] gi|146397832|gb|ABQ26465.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Geobacter uraniireducens Rf4] Length = 298 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 133/239 (55%), Gaps = 10/239 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVED----------NSPHVARIAIRGQIEDSQELIER 56 KIK L++V L ++F S ++ + + ++G I DSQE +++ Sbjct: 2 KIKWLLFGLAVVMLIFIFFVASLYIATTITGEKTDFVGKEGIGLVEVKGIILDSQETVKQ 61 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + ++++ A+++ + SPGG + I+ A++K+ +K V+ + +AAS GY I+ Sbjct: 62 LFDFKKNENVKAVVLRIESPGGVVGPSQEIYDAVKKLALKKKVVVSMGSVAASGGYYIAA 121 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + I A ++ GSIGVL ++ ++ +DK+G+ ++K+ K SP ++ + Sbjct: 122 PATKIFANPGTITGSIGVLMKFSNIEGLMDKIGMKAFTIKTGKYKDVGSPVRTMSVEDKA 181 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 M+Q V+DS++ FV+ V+E R +P ++ L+DGRI++G +A + L+D +G ++ + Sbjct: 182 MLQGVIDSTHGQFVKAVAEGRKLPLEQVKTLADGRIYSGEQALALKLVDNLGTMQDAIE 240 >gi|261253430|ref|ZP_05946003.1| protease IV [Vibrio orientalis CIP 102891] gi|260936821|gb|EEX92810.1| protease IV [Vibrio orientalis CIP 102891] Length = 617 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 2/173 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEALKEAGKPVVASMSSLAASGGYWIS 415 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +++ IVA T+L GSIG+ + L+ LG+ V +SP ++ + ++ A Sbjct: 416 MSADRIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTSPF-SDVGVTTGLSDGAS 474 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q Q ++ Y+ F+ LVS+SR+IP + ++ GR+WTG +A + GLID +G Sbjct: 475 QAFQMGIEHGYNRFIGLVSQSRDIPLENVDDVAQGRVWTGQDALEFGLIDKIG 527 >gi|315180695|gb|ADT87609.1| protease IV [Vibrio furnissii NCTC 11218] Length = 616 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 129/257 (50%), Gaps = 29/257 (11%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 RG + L + + DD A+++ + SPGGSA+A E I I+ +K KPV+ Sbjct: 343 RGTV-GGDTLASLLRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEAIKAAGKPVVIS 401 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK- 161 + +AAS GY IS + + IVA T+L GSIG+ + L+KLG+ V +SP Sbjct: 402 MSSLAASGGYWISMSGDQIVAQPTTLTGSIGIFSVITTFEKGLNKLGIYTDGVGTSPFSG 461 Query: 162 -AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 + S+ A+QM ++ YH F+ LV+E R++ + ++ GR+WT +A+K Sbjct: 462 VGVTTGLSDGIKDALQMG---IEHGYHRFISLVAEHRHMSEQEVDKVAQGRVWTAQDAQK 518 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--------PPKNYWFCDL-------KN 265 +GL+D +G ++ A+ + S+ K+ +N P + DL Sbjct: 519 LGLVDKLGDFDD------AVALAASLAKLDTYNLYWVEEPLSPAQQFLQDLFGQVRVGLG 572 Query: 266 LSISSLLEDTI-PLMKQ 281 L ISSL+ D + P KQ Sbjct: 573 LDISSLMPDALKPATKQ 589 >gi|258404286|ref|YP_003197028.1| signal peptide peptidase SppA, 36K type [Desulfohalobium retbaense DSM 5692] gi|257796513|gb|ACV67450.1| signal peptide peptidase SppA, 36K type [Desulfohalobium retbaense DSM 5692] Length = 296 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 106/192 (55%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 + +RG + +++ + IE + + + ++V ++SPGG + ++ A+ + KPV+ Sbjct: 52 VHVRGVLTNARPVTHWIETLRQKNRVKGVLVRINSPGGVVAPSQEVYSAVSSLAEDKPVV 111 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + +AAS GY ++ + I A ++ GSIGV Q K LDKLG+ ++V S P+ Sbjct: 112 VSMGSVAASGGYYVAVGAPTIFANPGTITGSIGVKAQLKNFKGLLDKLGIEDETVVSGPL 171 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K S + + MQ +VD + FV+ +++ R++ + L+DGR +TG +AK Sbjct: 172 KDATSAAKPMTEAERKYMQGMVDDMHAQFVQAIAKGRDMDLEVVRRLADGRAYTGRQAKD 231 Query: 221 VGLIDVVGGQEE 232 +GL+D +G ++ Sbjct: 232 LGLVDALGSMQD 243 >gi|33152022|ref|NP_873375.1| protease IV, signal peptide peptidase [Haemophilus ducreyi 35000HP] gi|33148244|gb|AAP95764.1| protease IV, signal peptide peptidase [Haemophilus ducreyi 35000HP] Length = 618 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 141/272 (51%), Gaps = 22/272 (8%) Query: 34 NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 N+ H +A I + G+I S+ + E + + D++ +I+ ++SPGGS A Sbjct: 319 NAEHKIAVINVEGEIISGKSKERSAGSETISELLRQAREDNNVDGVILRVNSPGGSVVAS 378 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + +Q ++ KPV+T + +AAS GY IS S+ I+A+ ++ GSIG+ + Sbjct: 379 EIILQELQSIQQAGKPVVTSMGGLAASGGYWISATSDKIIASPNTITGSIGIFGLAMTFE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LG+S V +SP+ A+ S ++ + +++Q +++ Y F+ LVS RN+ Sbjct: 439 KTAKHLGISEDGVATSPL-AKTSSLQHLSNEHAELIQINIENGYDAFLDLVSRGRNMSKA 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---W 259 + ++ G++W+G +A K GL+D +G + L L ++Q RK K N K++ W Sbjct: 498 EVDKVAQGQVWSGEDALKHGLVDQLGDFHTAYDVLTDL-INQK-RKAKGENEIKHFTAQW 555 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 F + SSLL++ K + AVW Sbjct: 556 FIESDKGLFSSLLKNI-----GFKAKSTLAVW 582 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 18/195 (9%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQEL-------IERIERISRDDSATALIVSLSSPG 77 + S ++ DN A I+ ++ + + L + I + ++D + T +++ LS Sbjct: 58 LNLSGYLTDNHDDFAHRLIQSELTNDESLKASTFDVVRAIGKAAKDPNITGIVLDLSKFE 117 Query: 78 GSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI--- 132 GS ++ + + K + KPVI + S YL S A I + + GSI Sbjct: 118 GSDHSSLSFIGSELKAFKTSGKPVIAIGENYSQSQYYLASFADKIYL----NKAGSINLQ 173 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFV 190 G+ F Y K LDK+ + K+ PF ++++ +A Q Q +++S +H F Sbjct: 174 GLNFSSLYFKALLDKIDAVPHIFRVGTYKSAVEPFLRNDMSDEAKQNAQTLLNSIWHQFR 233 Query: 191 RLVSESRNIPYDKTL 205 ++E+R I D+ L Sbjct: 234 TDIAENRMIAVDQVL 248 >gi|212703644|ref|ZP_03311772.1| hypothetical protein DESPIG_01689 [Desulfovibrio piger ATCC 29098] gi|212672939|gb|EEB33422.1| hypothetical protein DESPIG_01689 [Desulfovibrio piger ATCC 29098] Length = 363 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 106/198 (53%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +A + + G I D + I+++ R ++V + SPGG A A + ++ A+ ++ Sbjct: 111 GSERIALVRVTGPIMDIDAQLRWIDKLGRMPGVKGVLVRVDSPGGGAAASQELYEALARL 170 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KP+ + AAS G ++S A + A +++ GSIGV P ++ LDKLG+ + Sbjct: 171 GKDKPIAVSMGSTAASGGLMVSMAGKRVFANASTVTGSIGVRMDIPQIRGLLDKLGLGRQ 230 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ ++P K S + Q V+ + FV +V++ R++ + L+ G+I+ Sbjct: 231 TLTTAPYKDAGSMLEPLTADEKAYFQGVLKDMHEQFVDIVAQGRHMDRTRAARLATGKIF 290 Query: 214 TGAEAKKVGLIDVVGGQE 231 TG EA ++GL+D +GGQ+ Sbjct: 291 TGREAVELGLVDELGGQQ 308 >gi|325913830|ref|ZP_08176189.1| signal peptide peptidase SppA, 67K type [Xanthomonas vesicatoria ATCC 35937] gi|325539905|gb|EGD11542.1| signal peptide peptidase SppA, 67K type [Xanthomonas vesicatoria ATCC 35937] Length = 633 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDEVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG +E Sbjct: 511 AIDKVARGRVWSGAQAKQHGLVDAFGGMQEA 541 >gi|332707294|ref|ZP_08427347.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] gi|332354028|gb|EGJ33515.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] Length = 274 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + ++E ++ + + L++ + SPGG+ + I+ A+ +++ Sbjct: 12 QIARIEITGAIAGGTRKRVLEALKTVE-EKKFPVLLLRIDSPGGTVGDSQEIYSALVRLR 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 EKVKIVASFGNISASGGVYIGMGAEHIVANPGTITGSIGVILRGNNIERLLDKIGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K + E+ ++Q+++D+SY FV+ V++SRN+ D +DGRI+T Sbjct: 131 IKSGPYKDILAFDRELTEPEKTILQELIDTSYQQFVQTVAQSRNLDVDVVKSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A +G++D +G +E+ Sbjct: 191 GEQAHNLGVVDRLGTEED 208 >gi|217964261|ref|YP_002349939.1| exfoliative toxin [Listeria monocytogenes HCC23] gi|290894491|ref|ZP_06557447.1| peptidase [Listeria monocytogenes FSL J2-071] gi|217333531|gb|ACK39325.1| exfoliative toxin [Listeria monocytogenes HCC23] gi|290555946|gb|EFD89504.1| peptidase [Listeria monocytogenes FSL J2-071] gi|307571171|emb|CAR84350.1| signal peptide peptidase, putative [Listeria monocytogenes L99] Length = 337 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 18/223 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGDDTIAVLSVDGTIQDTGDSGSLLGGGGYDHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 Q Y Y + KLGVS ++KS K S + ++MQ ++D SY+ FV++V+ Sbjct: 177 MQGYDY-SELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVA 235 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + R + +K ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 236 KGRGMSAEKVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 278 >gi|307720629|ref|YP_003891769.1| signal peptide peptidase SppA, 36K type [Sulfurimonas autotrophica DSM 16294] gi|306978722|gb|ADN08757.1| signal peptide peptidase SppA, 36K type [Sulfurimonas autotrophica DSM 16294] Length = 289 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 123/221 (55%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 I+ + + V + ++ F+ +S E + ++ +I + G I D+ E++E+I + + +++ Sbjct: 18 IQNHFKAMVFVLILILIFAPASKKEFTNYNLQKINLSGPIVDATEIVEKINKAANNNAIK 77 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++S++SPGG+ I AI+++K +KPV+ AS Y S ++ I+A S Sbjct: 78 GVLLSVNSPGGAVSPSIEIAYAIKRLKIKKPVVAYAKGTMASGSYYASIWADKIIANPGS 137 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q + ++K+G+ + VK+ K +P V + V+ +Y Sbjct: 138 MIGSIGVIMQGADLSGLMNKIGIKSQVVKAGLYKQIGTPDRPWKKYEVAELNKVIKGTYD 197 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F + V+++R + + K ++ I+T A+AKKVGL+D +G Sbjct: 198 MFTKDVADARKLDFKKRDTYANAHIFTAAQAKKVGLVDQLG 238 >gi|294614153|ref|ZP_06694074.1| periplasmic serine protease [Enterococcus faecium E1636] gi|291593003|gb|EFF24591.1| periplasmic serine protease [Enterococcus faecium E1636] Length = 341 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 103/191 (53%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ + D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHENFMEQLKAVEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGLG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FVR+VSE RN + ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEEAVLQAYIDSAYQRFVRIVSEGRNKSEEAVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ Q++ Sbjct: 265 LGFPEDALQAM 275 >gi|157736751|ref|YP_001489434.1| protease IV (PspA) [Arcobacter butzleri RM4018] gi|157698605|gb|ABV66765.1| protease IV (PspA) [Arcobacter butzleri RM4018] Length = 294 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 11/234 (4%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVED-----NSPHVARIAIRGQIEDSQELIE 55 ++F+ K KT +V LT++Y + + E+ ++ ++ +I + G I D + +E Sbjct: 16 LDFITKYFKT------IVFLTIIYVVFFNSDEERISTKSTANLQKIELVGPIIDVSKTLE 69 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 IE+ D + ++ + SPGG+ + AI+++K KPV+ + AS Y S Sbjct: 70 NIEKAKTDTNIKGVLFVVDSPGGAVAPSVEVAYAIKELKQIKPVVVYASGVIASGSYYAS 129 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I+A S+VGSIGV+ Q K +DK+G+ ++VK+ K +P + Sbjct: 130 IWADKIIANHGSMVGSIGVIMQGVNTKELMDKIGIQTQTVKAGKYKESGTPTRKWTEFEE 189 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q V+D +Y+ F+ V+ +RN+ +D +I+T +AK VGL+D V Sbjct: 190 KQLQSVIDDTYNMFITDVATARNLDIKNYTSFADAKIFTSKQAKDVGLVDEVAN 243 >gi|119477001|ref|ZP_01617282.1| protease IV [marine gamma proteobacterium HTCC2143] gi|119449808|gb|EAW31045.1| protease IV [marine gamma proteobacterium HTCC2143] Length = 621 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 105/181 (58%), Gaps = 1/181 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAG 111 L + I ++ RD+S AL++ + S GGSA+A E I R + +K + +P++ + AAS G Sbjct: 351 LAQLIRQVRRDESVDALVLRVDSGGGSAFASEVIRRELALLKQQGRPLVVSMGSTAASGG 410 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I A T+L GSIG+ +P ++ L KLG+S V ++ M +N Sbjct: 411 YWISALADEIWATPTTLTGSIGIFSAFPTIEKTLGKLGISNDGVGTTAMADAGRIDRPLN 470 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + MQ +++ Y F+ +V+ R++ D+ ++ GR+W+GA+A GL+D +GG + Sbjct: 471 SVFGRAMQSSLENGYARFLTIVASGRDMTTDQVDDVAQGRVWSGADAFDKGLVDQLGGLD 530 Query: 232 E 232 + Sbjct: 531 Q 531 >gi|148655954|ref|YP_001276159.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] gi|148568064|gb|ABQ90209.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] Length = 571 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 8/204 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I S+ +I+ + + R+ A+++ ++SPGGSA+ + I+R ++++ RKPV+ + ++ Sbjct: 317 IAGSESIIQALRQAERNPRLAAVLLYINSPGGSAFDSDLIWREVRRLDRRKPVVAVMGDV 376 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY ++ + I+A ++ GSIGVL P ++ L + GV+ ++ A + Sbjct: 377 AASGGYYVASGARTILAQPGAVTGSIGVLIIRPVIEGLLKRAGVNTVAIGRG---ANSAF 433 Query: 167 FSEVNPKAVQ--MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 F P + ++ ++D SY F + VS RNIP L+ GR+W+G EA + GLI Sbjct: 434 FVSDAPAEAERSAVRALIDDSYALFKQRVSTGRNIPEPALEPLAGGRVWSGREAYEYGLI 493 Query: 225 DVVGGQEEVW---QSLYALGVDQS 245 D GG E Q L L D++ Sbjct: 494 DASGGVPEALLKAQELAGLPRDRT 517 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 90/183 (49%), Gaps = 2/183 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L R+E ++ D +++ +++ E++ + I++ + R + + Y Sbjct: 65 LRHRLEWLASDPQVRGIVLDINTLTCGWATIESLHQEIRRFRERGKRVVARLTNPDTKTY 124 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EV 170 + +CA+++IVA +L+ G+ ++K L K+ +S++ SP K P + ++ Sbjct: 125 VAACAADLIVAPPAALLNVTGLYTGVRFLKDALAKVDLSVEVTAVSPYKTAGDPLARPDM 184 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 +P+ + ++ ++D Y V ++ +R D+ L D W+ A++ GLID V + Sbjct: 185 SPENREQIERLLDLRYAAIVETIATARRKTPDEVRALIDTAPWSAQRAQEAGLIDAVLYE 244 Query: 231 EEV 233 +E+ Sbjct: 245 DEL 247 >gi|170717625|ref|YP_001784706.1| signal peptide peptidase SppA, 67K type [Haemophilus somnus 2336] gi|168825754|gb|ACA31125.1| signal peptide peptidase SppA, 67K type [Haemophilus somnus 2336] Length = 621 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 128/229 (55%), Gaps = 15/229 (6%) Query: 36 PHVARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAGEAI 86 P +A + + G I D + + I ++ R + DD + A+++ ++SPGGSA+A E I Sbjct: 324 PAIAVVNVEGAIVDGESDEQNVGGDSIAQLLREANDDPNIKAVVLRVNSPGGSAFASEII 383 Query: 87 FRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + + K+ KPV+ + MAAS GY IS ++ IVA ++ GSIG+ +P + + Sbjct: 384 RQEVDNLQKSGKPVVVSMGAMAASGGYWISSTADYIVADPNTITGSIGIFAMFPTFEKSM 443 Query: 146 DKLGVSIKSVKSSP--MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K+GV+ V ++ MK+ SP S+++ + +Q+ ++ Y F+ +VS RN+ + Sbjct: 444 QKIGVNADGVATTDVVMKSHFSPLSKISSEIIQLE---IEHGYDQFLDVVSRGRNLSKTQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 ++ G++W+G +A L+D +G ++ + L + +S +IKD+ Sbjct: 501 VDKIAQGQVWSGFDAYTYKLVDQLGSFDDAVEKARELVIQKSSEEIKDF 549 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 13/185 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAY-AGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++ I+ +D TAL++ L+ G A I +AIQ K ++KPVI S Sbjct: 95 DVVNAIQAAKKDPKITALVLDLNYFDGKDIPALTYIGKAIQAFKASKKPVIAYADNYTQS 154 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 YL++ +++I+ V G++ + Y K +KL ++ + K+ PF Sbjct: 155 Q-YLLASYADVILLNPQGEVAIEGMVAENLYFKSLFNKLEITPHIFRVGTYKSAVEPFML 213 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-----DKTLVLSDGRIWTGAE---AK 219 +++ K+ + ++ + + ++V+E+R+IP D LS+ + G + AK Sbjct: 214 DKMSEKSRENTSRWLNQLWKSYQQIVAENRDIPLAQVLPDSKTYLSELKALNGNQTEYAK 273 Query: 220 KVGLI 224 K GLI Sbjct: 274 KRGLI 278 >gi|323699943|ref|ZP_08111855.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. ND132] gi|323459875|gb|EGB15740.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans ND132] Length = 300 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 4/227 (1%) Query: 15 LSLVTLTVVYF---SWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 ++L+T + +F W+ + + + + + G I DS ++ I + DDS ++ Sbjct: 27 MALITGVMAFFRALGWTPGSLALSGDKIGIVHVEGMILDSSRVVRFIRSLEEDDSVKGVL 86 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGGS + I+ A++++ KPVI +AAS GY SC + +I A S+ Sbjct: 87 LRVDSPGGSIAPSQEIYAAVKRLNQVKPVIASYGTVAASGGYYASCPARLIFANSGSITA 146 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ ++ V ++K G+ + + + KA +P + + M ++ + FV Sbjct: 147 SIGVMAEFVTVADAMEKFGIRPEVLTTGKFKAAGTPLRNLTDAQREQMLGLMQDLHDQFV 206 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+E+R + + ++DGR TG +A +GLID +G Q + + L Sbjct: 207 DDVAEARGMERARIAAIADGRAVTGRQALALGLIDRLGTQADAVEEL 253 >gi|188574921|ref|YP_001911850.1| signal peptide peptidase SppA, 67K type [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519373|gb|ACD57318.1| signal peptide peptidase SppA, 67K type [Xanthomonas oryzae pv. oryzae PXO99A] Length = 629 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 327 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 387 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q +++ Y F V+++R+ D Sbjct: 447 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQALINKGYADFTGKVAQARHQSVD 506 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 507 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 537 >gi|325570031|ref|ZP_08145956.1| U7 family peptidase [Enterococcus casseliflavus ATCC 12755] gi|325156859|gb|EGC69030.1| U7 family peptidase [Enterococcus casseliflavus ATCC 12755] Length = 343 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 15/228 (6%) Query: 33 DNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 D + R+++ G I D Q +E + I D + +++ +++PGG Sbjct: 59 DQDNRIVRLSLEGTIASSSSGGLFTTESYDHQRFLEELRMIQEDPTIGGILMEVNTPGGG 118 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I R + K+K P+ + MAAS GY IS ++ I A + ++ GSIGV+ Sbjct: 119 VYESAEIARELAKIKELGIPMYVSMKNMAASGGYYISAGADKIFATDETITGSIGVIMSG 178 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +KLG+ + KS +K S E +++Q VD++Y FV++V+E R Sbjct: 179 LNYAGLFEKLGIEDNTYKSGALKDVGSATREPTEADKEVLQTYVDNAYGRFVKIVAEGRG 238 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQS 245 + + ++DGRI+ G +A VGL+D +G E+ ++ A LG++ + Sbjct: 239 MTEEAVRKIADGRIYDGQQAVSVGLVDEIGFPEDTLAAMQADLGLEDA 286 >gi|259908290|ref|YP_002648646.1| protease 4 [Erwinia pyrifoliae Ep1/96] gi|224963912|emb|CAX55416.1| Protease IV [Erwinia pyrifoliae Ep1/96] gi|283478224|emb|CAY74140.1| protease IV [Erwinia pyrifoliae DSM 12163] Length = 618 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQELIERIE--------RISR-DDSATALIVSLSSPGGSAYAGEAIF 87 +VA I G I D +E + R +R D A++ ++SPGGS A E I Sbjct: 327 NVAVILANGAIMDGEEAPGSVGADTTALEIRAARLDPKIKAIVFRVNSPGGSVTASETIR 386 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + K KPV+ + MAAS GY +S +N I+A+ +L GSIG+ V+ LD Sbjct: 387 EELAAAKEAGKPVVVSMGGMAASGGYWVSTPANYIIASPNTLTGSIGIFGVINTVESSLD 446 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ + + P+ QMMQ +D Y F+ LV++SRN ++ Sbjct: 447 AIGVHTDGVATSPL-ADVASTKALPPEVQQMMQLSIDKGYQNFIGLVAKSRNKTSEEIDK 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG++AK GLID +G Sbjct: 506 IAQGHVWTGSDAKAKGLIDALG 527 >gi|75908676|ref|YP_322972.1| peptidase S49, protease IV [Anabaena variabilis ATCC 29413] gi|75702401|gb|ABA22077.1| Peptidase S49, protease IV [Anabaena variabilis ATCC 29413] Length = 609 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 4/191 (2%) Query: 43 IRGQIEDSQELIERIERI----SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + G+ +D Q +R RI +D++ A+++ ++SPGGSA A E + R I+ + KP Sbjct: 327 VDGKGDDGQIGGDRFARIFNKIRQDENVKAVVLRINSPGGSATASEVMQREIRLTRESKP 386 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ + + AAS GY I+ SN I A ++ GSIGV + + G++ +VK++ Sbjct: 387 VVVSMGDYAASGGYWIATDSNRIFAEPNTITGSIGVFGVLFNGQKLANDNGITWDAVKTA 446 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + +P+ + + Q VD Y+ FV V++ R +P K ++ GR+W+G A Sbjct: 447 RYADSQTVARPKSPQEIAIYQRSVDRIYNMFVNKVAQGRKLPTQKVAQIAQGRVWSGVTA 506 Query: 219 KKVGLIDVVGG 229 K++GL+D +GG Sbjct: 507 KQIGLVDEIGG 517 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 13/199 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-----KNRKPVITEVHE 105 + +I+ +E+ RD A+ + S G + G A + I+K K+ K VI Sbjct: 87 RNVIDSLEKAQRDKRIVAIYLDGSRGGNNL--GFASLKEIRKALEEFRKSGKKVIAYGVS 144 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEP 164 YL S A I + L I L P +V L K G+ ++ V++ K Sbjct: 145 WNEREYYLSSVADTIALNPLGGL--EINGLSSQPMFVAGALQKYGIGVQVVRAGKFKGAV 202 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKV 221 PF ++++P+ + Q ++D + + V SR I K ++D + + EAK Sbjct: 203 EPFVLNKLSPENREQTQKLLDDVWGEWRTTVGNSRKINPQKLQAIADNQSLLEPTEAKTN 262 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GL+D V ++V L L Sbjct: 263 GLVDQVAYNDQVVADLKKL 281 >gi|152990177|ref|YP_001355899.1| protease IV [Nitratiruptor sp. SB155-2] gi|151422038|dbj|BAF69542.1| protease IV [Nitratiruptor sp. SB155-2] Length = 296 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 108/193 (55%), Gaps = 1/193 (0%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P++ I + G I D++ ++++IE ++ + ++ +SSPGG+ I RAI+++ Sbjct: 54 PNLMEIRLDGPIIDAKNILKKIE-LAEQPNIKGILFVVSSPGGAVAPSIEISRAIKRISA 112 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +KPVIT AS Y S S I+A S VGSIGV+ + P +K LDKLGV+ + V Sbjct: 113 KKPVITYAAGTLASGSYYASIWSKKIIANPGSAVGSIGVILEAPNLKGLLDKLGVAPQVV 172 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ K +PF + +Q V++ +Y FV V+++R + ++ I+T Sbjct: 173 KAGKYKEAGTPFRPWKTYEKEELQKVINDTYDMFVHDVAKARRLDPKNKDQFAEAHIFTA 232 Query: 216 AEAKKVGLIDVVG 228 +A+KVGLID VG Sbjct: 233 RQAQKVGLIDEVG 245 >gi|94266274|ref|ZP_01289979.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] gi|93453125|gb|EAT03596.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] Length = 306 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 105/182 (57%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I + +L+ ++ R D+ A+++ + SPGG+ A + +F +++V +KPV+ + + Sbjct: 61 ITSADQLLAQLAEFGRRDNIKAIVLRIDSPGGAVGASQELFAEVKRVNQQKPVVAAMGSV 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS G + + IVA +L GSIGV+ ++ ++ +++G +++KS +K +P Sbjct: 121 AASGGLYAALGAERIVANPGTLTGSIGVIIKFANLEELFERIGYRSETIKSVDLKDSGAP 180 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P+ QM+Q++VD + F+ V+ R++ DGRI++G +A ++GL+D Sbjct: 181 DRPLAPEERQMLQEMVDDVHDQFIADVAADRDLSTTTVRAFGDGRIFSGNQALELGLVDQ 240 Query: 227 VG 228 +G Sbjct: 241 LG 242 >gi|261418196|ref|YP_003251878.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC61] gi|319767844|ref|YP_004133345.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC52] gi|261374653|gb|ACX77396.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC61] gi|317112710|gb|ADU95202.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC52] Length = 335 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 102/182 (56%), Gaps = 2/182 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 + Q ++ I++ D A+I+ ++SPGG I+ + K+K + KP+ + M Sbjct: 87 NHQTFLQMIKQAKEDQDVKAIILRINSPGGGVAESAEIYDQLMKLKKKTNKPIYVSMGAM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+ A + I A+ ++ GSIGV+ Q + K GV + ++KS P K +P Sbjct: 147 AASGGYYIAAAGDKIFASPETITGSIGVIMQSVNYEGLAKKYGVELVTIKSGPYKDIMNP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ +++Q +++ SY FV +V++ R +P D L+DGRI+ G +AK++ L+D Sbjct: 207 ARKMTEAEREILQRLINDSYDAFVDVVAKGRKLPEDTVRKLADGRIYDGRQAKELRLVDE 266 Query: 227 VG 228 G Sbjct: 267 FG 268 >gi|17232082|ref|NP_488630.1| protease IV [Nostoc sp. PCC 7120] gi|17133726|dbj|BAB76289.1| protease IV [Nostoc sp. PCC 7120] Length = 609 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 4/191 (2%) Query: 43 IRGQIEDSQELIERIERI----SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + G+ +D Q +R RI +D++ A+++ ++SPGGSA A E + R I+ + KP Sbjct: 327 VDGKGDDGQIGGDRFARIFNKIRQDENVKAVVLRINSPGGSATASEVMQREIRLTRESKP 386 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ + + AAS GY I+ SN I A ++ GSIGV + + G++ +VK++ Sbjct: 387 VVVSMGDYAASGGYWIATDSNRIFAEPNTITGSIGVFGVLFNGQKLANDNGITWDAVKTA 446 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + +P+ + + Q VD Y+ FV V++ R +P K ++ GR+W+G A Sbjct: 447 RYADSQTVARPKSPQEIAIYQRSVDRIYNMFVNKVAQGRKLPTQKVAEIAQGRVWSGVTA 506 Query: 219 KKVGLIDVVGG 229 K++GL+D +GG Sbjct: 507 KQIGLVDEIGG 517 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 33/242 (13%) Query: 21 TVVYFSWSSHVEDNSPHVA-------------RIAIRGQIEDSQELIERIERISRDDSAT 67 +VV F S ++ D P R+ +R +I+ +E+ RD Sbjct: 51 SVVVFDLSMNITDREPSAGEELQNRFSGVTQERMTLR-------NVIDSLEKAQRDKRIV 103 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKV-----KNRKPVITEVHEMAASAGYLISCASNIIV 122 A+ + S G + G A + I+K K+ K VI YL S A I + Sbjct: 104 AIYLDGSRGGNNL--GFASLKEIRKALEEFRKSGKKVIAYGVAWDEKEYYLSSVADTIAL 161 Query: 123 AAETSLVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 L I L P ++ L K G+ ++ V++ K PF +++P+ + Q Sbjct: 162 NPLGGL--EINGLSSQPMFLAGALQKYGIGVQVVRAGKFKGAVEPFLLDKLSPENREQTQ 219 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++D + + V SR I K ++D + + EAK GL+D V ++V L Sbjct: 220 KLLDDVWGEWRTTVGNSRKINPQKLQAIADNQSLLEATEAKTNGLVDQVAYNDQVVADLK 279 Query: 239 AL 240 L Sbjct: 280 KL 281 >gi|260769000|ref|ZP_05877934.1| protease IV [Vibrio furnissii CIP 102972] gi|260617030|gb|EEX42215.1| protease IV [Vibrio furnissii CIP 102972] Length = 616 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 29/257 (11%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 RG + L + + DD A+++ + SPGGSA+A E I I+ +K KPV+ Sbjct: 343 RGTV-GGDTLASLLRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEAIKAAGKPVVIS 401 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK- 161 + +AAS GY IS + + IVA T+L GSIG+ + L+KLG+ V +SP Sbjct: 402 MSSLAASGGYWISMSGDQIVAQPTTLTGSIGIFSVITTFEKGLNKLGIYTDGVGTSPFSG 461 Query: 162 -AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 + S+ A+QM ++ YH F+ LV+E R++ + ++ GR+WT +A+K Sbjct: 462 VGVTTGLSDGIKDALQMG---IEHGYHRFISLVAEHRHMSEQEVDKVAQGRVWTAQDAQK 518 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--------PPKNYWFCDL-------KN 265 +GL+D +G ++ A+ + S+ K+ +N P + DL Sbjct: 519 LGLVDKLGDFDD------AVALAASLAKLDTYNLYWVEEPLSPAQQFLQDLFGQVRVGLG 572 Query: 266 LSISSLLEDTI-PLMKQ 281 L +SSL+ D + P KQ Sbjct: 573 LDVSSLMPDALKPATKQ 589 >gi|257865950|ref|ZP_05645603.1| protease/peptidase [Enterococcus casseliflavus EC30] gi|257872283|ref|ZP_05651936.1| protease/peptidase [Enterococcus casseliflavus EC10] gi|257799884|gb|EEV28936.1| protease/peptidase [Enterococcus casseliflavus EC30] gi|257806447|gb|EEV35269.1| protease/peptidase [Enterococcus casseliflavus EC10] Length = 343 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 15/228 (6%) Query: 33 DNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 D + R+++ G I D Q +E + I D + +++ +++PGG Sbjct: 59 DQDNRIVRLSLEGTIASSSSGGLFTTESYDHQRFLEELRMIQEDPTIGGILMEVNTPGGG 118 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I R + K+K P+ + MAAS GY IS ++ I A + ++ GSIGV+ Sbjct: 119 VYESAEIARELAKIKELGIPMYVSMKNMAASGGYYISAGADKIFATDETITGSIGVIMSG 178 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +KLG+ + KS +K S E +++Q VD++Y FV++V+E R Sbjct: 179 LNYAGLFEKLGIEDNTYKSGALKDVGSSTREPTEADKEVLQTYVDNAYGRFVKIVAEGRG 238 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQS 245 + + ++DGRI+ G +A VGL+D +G E+ ++ A LG++ + Sbjct: 239 MTEEAVRKIADGRIYDGQQAVSVGLVDEIGFPEDTLAAMQADLGLEDA 286 >gi|166713751|ref|ZP_02244958.1| protease IV [Xanthomonas oryzae pv. oryzicola BLS256] Length = 633 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q +++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQALINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 541 >gi|300716991|ref|YP_003741794.1| Protease IV [Erwinia billingiae Eb661] gi|299062827|emb|CAX59947.1| Protease IV [Erwinia billingiae Eb661] Length = 618 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 23/253 (9%) Query: 27 WSSHVEDNSPHVARIAI---RGQIEDSQELIE---------RIERISRDDSATALIVSLS 74 + V+DN IA+ G I D E I D A++ ++ Sbjct: 314 YDYQVKDNGSTDGNIAVIMASGAIMDGDETAGSVGGDTTAMEIREARLDPKIKAIVFRVN 373 Query: 75 SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGGS A E I + K KPV+ + MAAS GY IS +N I+A+ ++L GSIG Sbjct: 374 SPGGSVTASETIREELAAAKEAGKPVVVSMGGMAASGGYWISTPANYIIASPSTLTGSIG 433 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + V+ LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ LV Sbjct: 434 IFGVINTVENTLDSIGVHTDGVSTSPL-ADISTTKALPPEVQQMMQMSIENGYKNFLGLV 492 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + SRN ++ ++ G +WTG +AK GL+D +G ++ A+ + K+KD Sbjct: 493 AHSRNKTPEQIDQIAQGHVWTGTDAKANGLVDAMGDFDD------AVAKAAELAKLKD-- 544 Query: 254 PPKNYWFCDLKNL 266 K W+ D N Sbjct: 545 -AKLSWYQDDPNF 556 >gi|220910108|ref|YP_002485419.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7425] gi|219866719|gb|ACL47058.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7425] Length = 270 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 114/198 (57%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI + G I + + L++ + I + AL++ + SPGG+ + I+ A+++++ Sbjct: 11 QIARIEVTGVIAAATRKRLLQAFKTIE-EKGFPALLLRIDSPGGTVGDSQEIYTALKRLR 69 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K+ Sbjct: 70 EKVKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKIGVSFKT 129 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K + E+ ++Q+++D+SY FV+ V+E R + + +DGR++T Sbjct: 130 IKSGPYKDILAFDRELTEPEKHILQELIDTSYGQFVQTVAEGRKLAEETVRSFADGRVFT 189 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A +GL+D +G +EE Sbjct: 190 GQQALALGLVDRLGTEEE 207 >gi|212697414|ref|ZP_03305542.1| hypothetical protein ANHYDRO_01984 [Anaerococcus hydrogenalis DSM 7454] gi|212675606|gb|EEB35213.1| hypothetical protein ANHYDRO_01984 [Anaerococcus hydrogenalis DSM 7454] Length = 333 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 118/201 (58%), Gaps = 5/201 (2%) Query: 33 DNSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 D+ +A ++ G I D Q + +++++ + DDS LI+ ++SPGG+ Y E I Sbjct: 64 DSKNKIAVLSYEGAIGDGQVYDDFMDQLDDVYDDDSVKGLIMQVNSPGGAVYNSEQIANK 123 Query: 90 IQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+K++ K PV T + MAAS GY IS ++ I A+ +L GSIGV+ + +K Sbjct: 124 IKKIQKDKKIPVFTVMKTMAASGGYYISAPTDRIYASNETLTGSIGVIMSSTSFQGLFEK 183 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ +++ + MK S ++ + + QD+++SS+ FV++VS+ R++ D+ L Sbjct: 184 YGIKQQNITTGKMKDAGSVGKDMTDEQKKYFQDLINSSFDRFVKIVSQGRSMKEDEVRKL 243 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 +DGR++ GA+AK GL+D +G Sbjct: 244 ADGRVYDGAQAKNNGLVDKIG 264 >gi|288801210|ref|ZP_06406665.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 299 str. F0039] gi|288331821|gb|EFC70304.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 299 str. F0039] Length = 590 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY++ + V++ + V A G I SQ + +E++ +DD+ A+++ ++S GG AYA Sbjct: 305 VYYAQGTIVQNQA--VGLFAQGGDIV-SQTVCTDLEKLMKDDNIKAVVIRINSGGGDAYA 361 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+ + ++K +KPV+ + + AAS Y +SC +N I+A T+L GSIG+ P Sbjct: 362 SEQIWHQVTELKAKKPVVISMGDYAASGAYYLSCNANWIIAQPTTLTGSIGIFGVIPDFS 421 Query: 143 PFLD-KLGVSIKSVKSSPMKAEPSPFSE-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 ++ KLGV ++++ + + F+ +N V+ + + Y F + V+E R++ Sbjct: 422 GLVNGKLGVKFDEIQTNKNSSFGNVFARPLNQDEVKYLTAKIQRGYSLFRKRVAEGRHLT 481 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ ++ G +W G++A + L+D +GG E Sbjct: 482 IEQVEKIAQGHVWLGSDALNIHLVDQLGGLNE 513 >gi|297839273|ref|XP_002887518.1| hypothetical protein ARALYDRAFT_476539 [Arabidopsis lyrata subsp. lyrata] gi|297333359|gb|EFH63777.1| hypothetical protein ARALYDRAFT_476539 [Arabidopsis lyrata subsp. lyrata] Length = 676 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 400 AEQLIEKIRSVRESKKFKAAIIRIDSPGGDALASDLMWREIKLLAETKPVIASMSDVAAS 459 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPS 165 GY ++ A+N IVA +L GSIGV+ + +K+G + +++ + AE Sbjct: 460 GGYYMAMAANTIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEER 519 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF P+ ++ + +Y F + SR++P DK ++ GR+WTG +A GL+D Sbjct: 520 PF---KPEEAELFEKSAQHAYQLFRDKAALSRSMPVDKMEEVAQGRVWTGRDAHSRGLVD 576 Query: 226 VVGG 229 +GG Sbjct: 577 ALGG 580 >gi|94496302|ref|ZP_01302879.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. SKA58] gi|94424048|gb|EAT09072.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. SKA58] Length = 617 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 1/167 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL+V + SPGGS A E I AI + K PV+ + +AAS GY +S ++I A Sbjct: 342 ALVVRVDSPGGSVMASEKIRSAIMQAKEDGLPVVVSMANVAASGGYWVSTPGDVIFAEPD 401 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P + L K+G++ V+++P+ +P P+ Q+MQ V+ Y Sbjct: 402 TITGSIGVFGILPSFEGTLAKMGITTDGVRTTPLSGQPDLAGGTTPEFDQIMQLGVEDIY 461 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 FV LV++SR ++ ++ GR+W G A+++GL+D GG E+ Sbjct: 462 RRFVGLVAQSRKKKPEQIDRIAQGRVWDGGTARQLGLVDRFGGLEDA 508 >gi|315635928|ref|ZP_07891190.1| signal peptide peptidase SppA [Arcobacter butzleri JV22] gi|315479907|gb|EFU70578.1| signal peptide peptidase SppA [Arcobacter butzleri JV22] Length = 294 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 11/234 (4%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVED-----NSPHVARIAIRGQIEDSQELIE 55 ++F+ K KT +V LT++Y + + E+ ++ ++ +I + G I D + +E Sbjct: 16 LDFITKYFKT------IVFLTIIYVVFFNSDEERITTKSTANLQKIELVGPIIDVSKTLE 69 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 IE+ D + ++ + SPGG+ + AI+++K KPV+ + AS Y S Sbjct: 70 NIEKAKTDTNIKGVLFVVDSPGGAVAPSVEVAYAIKELKQIKPVVVYASGVIASGSYYAS 129 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I+A S+VGSIGV+ Q K +DK+G+ ++VK+ K +P + Sbjct: 130 IWADKIIANPGSMVGSIGVIMQGVNTKELMDKIGIQTQTVKAGKYKESGTPTRKWTEFEE 189 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q V+D +Y+ F+ V+ +RN+ +D +I+T +AK VGL+D V Sbjct: 190 KQLQSVIDDTYNMFITDVATARNLDIKNYTSFADAKIFTSKQAKDVGLVDEVAN 243 >gi|116626894|ref|YP_829050.1| signal peptide peptidase SppA, 67K type [Candidatus Solibacter usitatus Ellin6076] gi|116230056|gb|ABJ88765.1| signal peptide peptidase SppA, 67K type [Candidatus Solibacter usitatus Ellin6076] Length = 573 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 97/173 (56%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + R+ D A+IV + SPGG A + I+R + + +KP++ + + AAS GY ++ Sbjct: 325 LRRVGSDSQIKAVIVRIDSPGGEVTASDEIWREMNLLAKKKPMVISMSDTAASGGYYMAM 384 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + IVA + GSIGV+F P ++ +KLG+S +++ S ++ + P+ Sbjct: 385 TGDPIVAYPATFTGSIGVVFGKPNIRGLYEKLGISKDAIQRGKNADIDSDYTPLTPEQRA 444 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ +D SY FV V+ +R+ +D+ ++ GR+W G++AK GL+D GG Sbjct: 445 KLRAGIDESYQDFVTKVANARHRTFDQIDQVAQGRVWLGSQAKPRGLVDETGG 497 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 3/146 (2%) Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K+ KPV + + A Y I+ ++ + + V G+ + Y K LDKLGV+++ Sbjct: 115 KSGKPVFAYLRQPGARE-YFIASDADRVYLGPSDPVMLKGLRAEMMYFKKTLDKLGVNVE 173 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + K F S+++P+ ++M VVD Y V ++ +R ++ + D Sbjct: 174 IEHAGKYKDFGDMFTRSDMSPETREVMTSVVDDLYSDLVSGIATARKKTPEEVRAIIDQG 233 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 +T ++A K GL+D + ++++W L Sbjct: 234 PFTASQALKAGLVDELRFEDQMWGEL 259 >gi|162456988|ref|YP_001619355.1| Signal peptide peptidase [Sorangium cellulosum 'So ce 56'] gi|161167570|emb|CAN98875.1| Signal peptide peptidase [Sorangium cellulosum 'So ce 56'] Length = 619 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 28/237 (11%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------QELIERIERISRDD 64 +L V+ S S +PHVA + G I S +EL + I R++ D Sbjct: 287 SLVDVFRSVSGASSLGAPHVAVVPAIGGITMSAKGMPIGSSDGIGERELGKTITRLTEDQ 346 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 SA A+++ + SPGGSA A + +++ + +++ +KP++ + MAAS GY ++CA IVA Sbjct: 347 SAKAVVLRIDSPGGSALASDLLWQKLMRLRQQKPLVVSIGGMAASGGYYLACAGTKIVAE 406 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP---MKAEPSPFSEVNP-------KA 174 TS++GSIGV+ V L +G++ ++V ++P A + S + P + Sbjct: 407 RTSIIGSIGVVGGKFAVGKALADIGINAETVAANPDPQRAARAAYMSALTPWDEPTRARV 466 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + M+ V Y F++ ++ RN+P + ++GRI+ G EA L+D +GG E Sbjct: 467 LASMEAV----YDLFLKRITAGRNLPLETIAPSAEGRIFGGVEAAGRSLVDELGGLE 519 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 8/213 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 +L++ + +S SA +V L S + I R + V+ +PV+ E + Sbjct: 76 QLVQSLRALSESASAKGFLVRLGSARLAFARAHEIGRILGDVRAAGRPVVCHADEYNNAT 135 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 L S A + + + V ++G+ Q + K LDKL V + ++ K PF+ Sbjct: 136 MLLASIACSKLWLSPAGQVDTVGIAAQLVFAKGLLDKLNVDVDFLQVGKFKGASEPFTRE 195 Query: 170 -VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +P+A + ++ + ++ + E R + L DG + EAK L+D +G Sbjct: 196 GASPEARRSLESALGGVREVWLSAIVEGRGKEALRE-ALEDG-PFAPEEAKARALVDEIG 253 Query: 229 GQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWF 260 E + L G ++S+ + P++ F Sbjct: 254 DLESATEDAKKLAGTERSVPRF--GGAPRDASF 284 >gi|149181105|ref|ZP_01859605.1| protease IV (signal peptide peptidase) [Bacillus sp. SG-1] gi|148851192|gb|EDL65342.1| protease IV (signal peptide peptidase) [Bacillus sp. SG-1] Length = 354 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 105/183 (57%), Gaps = 2/183 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASA 110 +E++ R+ DDS A+I+ ++SPGG I + +++ +KP+ + MAAS Sbjct: 109 FMEQLRRVQEDDSIRAVILKVNSPGGGVVESAQIHEKLVEIQEEAKKPIYVSMGSMAASG 168 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+ + I A+ +L GS+GV+ Q +K GV ++KS P K SP E+ Sbjct: 169 GYYIAAPAEKIFASRETLTGSLGVIMQSINYSELAEKYGVDFVTIKSGPHKDIMSPTREM 228 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +++Q +V++SY FV ++++ R + D+ ++DGR++ G +AK++ LID G Sbjct: 229 TEEEREILQSMVNNSYEGFVDVIAQGRGMSEDQVKKIADGRVYDGIQAKEINLIDDFGYI 288 Query: 231 EEV 233 E+V Sbjct: 289 EDV 291 >gi|16081247|ref|NP_393553.1| protease (pspA) related protein [Thermoplasma acidophilum DSM 1728] gi|10639220|emb|CAC11222.1| protease (pspA) related protein [Thermoplasma acidophilum] Length = 230 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 1/191 (0%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 S L++ +S GG A A + +F I+K++ +KPV + + + AS Y IS S+ I + Sbjct: 32 SVAGLVLVFNSGGGDAVASQLMFEMIRKIRKKKPVYSFIQGICASGAYWISAGSSKIYSL 91 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +TSL+GSIGV+ PY+KP LDK+GV +K K K S + E + + + V++ Sbjct: 92 DTSLIGSIGVISMIPYIKPLLDKIGVEMKIYKVGKYKDMLSSYREPSDEENEHYMRVLND 151 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVD 243 Y F V RNIP DK ++ G+I++ + A + LID +G + + +Y LG Sbjct: 152 VYRKFRDSVMTERNIPEDKMEDIAQGQIFSPSMAMENRLIDGIGTMDSMMDDMYRQLGRK 211 Query: 244 QSIRKIKDWNP 254 R I P Sbjct: 212 YKTRDILPRRP 222 >gi|291288840|ref|YP_003505656.1| signal peptide peptidase SppA, 36K type [Denitrovibrio acetiphilus DSM 12809] gi|290886000|gb|ADD69700.1| signal peptide peptidase SppA, 36K type [Denitrovibrio acetiphilus DSM 12809] Length = 288 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 118/198 (59%), Gaps = 2/198 (1%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 S +A + + G I D+++L ++++++ ++ +I+ ++SPGG + I+ I K+K Sbjct: 38 SNSIAVLRLEGVIIDTKDLDKKLKKLDANEKVKGIILEINSPGGVIAPTQVIYNRIMKMK 97 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV + +AAS GY I+ A++ + A E++ GSIGV+ QY V+ + K+G+ Sbjct: 98 --KPVYAVMESVAASGGYYIAVAADEVYALESTTTGSIGVIMQYSNVEELMSKIGIKSVV 155 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 KS +K PSP +++ + MQ ++ Y F+R V + R+I DK L+DGR+++ Sbjct: 156 FKSGKLKDVPSPTRDLSYSEKEYMQAMISEFYEQFLRDVLKRRSISEDKLRDLADGRVFS 215 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A ++ LID +G +EE Sbjct: 216 GRQAVELKLIDKIGTREE 233 >gi|307150266|ref|YP_003885650.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7822] gi|306980494|gb|ADN12375.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7822] Length = 599 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 22/247 (8%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE----DNSPHVARIAI---RGQIEDSQELIER 56 VL +K + S T S S++ E +N +IA+ G+I D + + Sbjct: 271 VLADLKKQTGQTSADDKTFAQISLSTYAEGLLNENQASTNQIAVVYADGEIVDGEGTVNN 330 Query: 57 I---------ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 I +I +D + A+++ ++SPGGSA A E I R I + +KP++ + +A Sbjct: 331 IGGERFAKELRKIRQDPNIKAVVLRVNSPGGSATASEIIGREIHLISQQKPIVVSMGNVA 390 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEP 164 AS GY IS ++ I A +++ GSIGV ++ + GVS IK+ K + + Sbjct: 391 ASGGYWISAGASHIFAEPSTITGSIGVFGLLFNIQKIANDNGVSWDVIKTAKLADINTST 450 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 P +E + + + + V Y+ F+ VS+SRN+ +K ++ GR+W+G +AKK+GL+ Sbjct: 451 RPKTE---QELAIYKRSVGQVYNLFIEKVSQSRNLSPEKVREIAQGRVWSGQDAKKIGLV 507 Query: 225 DVVGGQE 231 D +GG E Sbjct: 508 DELGGLE 514 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 3/129 (2%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ ++ +V ++ G+ Q ++ L K G+ ++ V+ K+ P+ + Sbjct: 147 YFLASVADQVVLNPMGMMELNGIGVQPMFLAGALKKYGIGVQVVRVGEYKSAVEPYIRQD 206 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVG 228 ++P Q +++ + F+ VS SR I K ++D + + EA+K+GL+D V Sbjct: 207 LSPANRLQTQVLLNDLWANFLTTVSSSRKISATKLQDIADNQGVLMPKEAEKLGLVDRVA 266 Query: 229 GQEEVWQSL 237 +EV L Sbjct: 267 YFDEVLADL 275 >gi|223041851|ref|ZP_03612039.1| protease 4 [Actinobacillus minor 202] gi|223017344|gb|EEF15767.1| protease 4 [Actinobacillus minor 202] Length = 622 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 128/232 (55%), Gaps = 21/232 (9%) Query: 38 VARIAIRGQI------EDS---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I I G+I ED+ LI +++R+ +D S L++ ++SPGGSA A E I + Sbjct: 328 IAVINIEGEITMGESLEDTAGTDTLIRQLQRVRQDKSVQGLVLRINSPGGSALASELIRQ 387 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG---VLFQYPYVKPF 144 ++ ++ PV++ + MAAS GY I+ S+ IVA +L GSIG VLF + Sbjct: 388 EVEAIQQAGIPVVSSMGGMAASGGYWIAATSDAIVADPNTLTGSIGIFGVLFNFEKTA-- 445 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LGV + +SP+ AE S ++ + +++Q V+ Y F+ LVS R + K Sbjct: 446 -QNLGVREDGISTSPL-AEISGLKPLSSQQSELIQMSVEQGYREFLDLVSRGRKMDLAKV 503 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G++W G +A+ +GL+D +G ++ +L LG + RK+K+ N P+ Sbjct: 504 DQIAQGQVWLGQKAQSLGLVDQLGNFDD---TLALLG-NLINRKLKEQNKPE 551 >gi|192362443|ref|YP_001982749.1| signal peptide peptidase SppA, 67K type [Cellvibrio japonicus Ueda107] gi|190688608|gb|ACE86286.1| signal peptide peptidase SppA, 67K type [Cellvibrio japonicus Ueda107] Length = 635 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 108/185 (58%), Gaps = 1/185 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S+ +++ + + +D+ AL++ + S GGSA+A E I I ++++ PV + +AA Sbjct: 364 SESMLKLLRQAKENDNLKALVIRVDSGGGSAFASEIIRTEINALRDKGIPVFISMGSVAA 423 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ AS+ I A T++ GSIGV +P ++ L +G++ + ++ + S Sbjct: 424 SGGYWIATASDEIWAQPTTITGSIGVFGAFPTLEKTLGNMGITSDGIATTELAGSMSISR 483 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++PK ++Q VD+ Y F+ LV+E+R ++ ++ G +WTGA AK++GL+D +G Sbjct: 484 PLSPKMGDIVQQSVDNIYQRFIHLVAETRQQTPEQIDAVAQGHVWTGARAKELGLVDNLG 543 Query: 229 GQEEV 233 E+ Sbjct: 544 TLEDT 548 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAA 108 ++LIE I++ + D + +++ GG I +A++ K + K +I H + Sbjct: 110 RDLIEAIQQAATDKRVSMIVIEPGKLLGGGISKINEIGQALEAFKASGKKIIAASHYYSQ 169 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 YL S A +I + S V G Y K LDKLG++I + +S K PF Sbjct: 170 DQYYLASFADDIYLHDMGS-VEVTGYGRYMAYYKTALDKLGITIHAFRSGKYKDFLEPFL 228 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 ++ ++ + +++ +H + + V ++RN+ Sbjct: 229 RDNMSDESREHNSAWLNALWHSYTQQVEKARNL 261 >gi|21233189|ref|NP_639106.1| protease IV [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770130|ref|YP_244892.1| protease IV [Xanthomonas campestris pv. campestris str. 8004] gi|188993338|ref|YP_001905348.1| protease IV [Xanthomonas campestris pv. campestris str. B100] gi|21115040|gb|AAM43018.1| protease IV [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575462|gb|AAY50872.1| protease IV [Xanthomonas campestris pv. campestris str. 8004] gi|167735098|emb|CAP53310.1| protease IV [Xanthomonas campestris pv. campestris] Length = 633 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSA-TALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEIKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK GL+D GG +E Sbjct: 511 AIDKVARGRVWSGAQAKDHGLVDAFGGMQEA 541 >gi|325925728|ref|ZP_08187103.1| signal peptide peptidase SppA, 67K type [Xanthomonas perforans 91-118] gi|325543856|gb|EGD15264.1| signal peptide peptidase SppA, 67K type [Xanthomonas perforans 91-118] Length = 642 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 340 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEVKAVVLRVDSPGGEVFAS 399 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 400 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 459 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 460 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 519 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 520 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 550 >gi|156742495|ref|YP_001432624.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] gi|156233823|gb|ABU58606.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] Length = 561 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 10/209 (4%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 I GQI S+ +++ + + R+ A+I+ ++SPGGSA+ E I+R ++++ RKPV+ Sbjct: 311 IGGQIAGSESIVQALRQAERNPRLAAVILYVNSPGGSAFDSELIWREVRRLDRRKPVVAV 370 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++AAS GY ++ + I+A ++ GSIGVL P + + + GV+ ++ A Sbjct: 371 MGDVAASGGYYVASGARTILAQRGTITGSIGVLIVRPVIDGLVKRAGVNTVAIGRGANSA 430 Query: 163 ---EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 +P +E AV+ + +D SY F + V E R++ + L+ GR+W G EA Sbjct: 431 FFISDAP-TEQERAAVRAL---IDDSYTVFKQRVMEGRSMSEEALEPLAGGRVWMGGEAH 486 Query: 220 KVGLIDVVGGQEEVW---QSLYALGVDQS 245 + LID VGG E Q L L DQ+ Sbjct: 487 ESHLIDDVGGMPEALLKAQELAGLPRDQT 515 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 2/124 (1%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y+ +CA+++IVA SL+ G+ + ++K L K+ VS++ SP K SE Sbjct: 124 YVAACAADLIVAPPVSLLTVTGLYAEVRFLKDALAKVDVSVEVTAVSPYKTAGDSLACSE 183 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++P+ + ++ ++D Y V ++ +R+ D+ L D W+ A++ GLID V Sbjct: 184 MSPENREQIERLLDQRYALIVETIANARHKTVDEVCSLIDTAPWSARRAQEAGLIDAVLY 243 Query: 230 QEEV 233 ++E+ Sbjct: 244 EDEL 247 >gi|313672173|ref|YP_004050284.1| signal peptide peptidase sppa, 36k type [Calditerrivibrio nitroreducens DSM 19672] gi|312938929|gb|ADR18121.1| signal peptide peptidase SppA, 36K type [Calditerrivibrio nitroreducens DSM 19672] Length = 284 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 115/205 (56%), Gaps = 3/205 (1%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N + + + G I +S LIE++++ +D + +I+ ++SPGG+ + I+R I+++ Sbjct: 35 NKKMIVLLDLEGIILESDTLIEKLKKYEKDSNVVGVILRINSPGGAVAPSQEIYRFIKRM 94 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPV + +AAS GY ++ A + I A ++ GSIGV+ ++ + DK+GV + Sbjct: 95 S--KPVYASMSTVAASGGYYVASACDRIYAMPGTITGSIGVIMKFTDLSKIYDKIGVRTE 152 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-LVSESRNIPYDKTLVLSDGRI 212 ++KS K S + + +++ VD Y+ F+ ++S+ + ++ L +DGRI Sbjct: 153 TIKSGKFKDIGSTTRSMTEEEKSILKQSVDDVYNQFIEDILSKRTFLNKEELLKYADGRI 212 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSL 237 TG EAK + L+D +G E+ ++ + Sbjct: 213 ITGREAKNLKLVDKLGSYEDAYEDM 237 >gi|147921090|ref|YP_685099.1| putative periplasmic serine protease [uncultured methanogenic archaeon RC-I] gi|110620495|emb|CAJ35773.1| putative periplasmic serine protease [uncultured methanogenic archaeon RC-I] Length = 318 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 102/192 (53%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S +++ + + D S A+++ ++SPGG+ A + I+R I K KP++ + ++A S Sbjct: 79 SNSIVKHLRKAEEDKSIKAIVLRINSPGGTPVAAQEIYRQINKTSQVKPIVVSMGDIATS 138 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A Y IS IVA + GSIGV++ + +K G+ KS P K + + Sbjct: 139 AAYYISAPCTKIVANPDTFTGSIGVIWTFENKSGLYEKEGIQYYVAKSGPYKDVGADWRG 198 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +N + ++++ SY FV V+ R++ ++ L+DGR++TG EA+ +GL+D +GG Sbjct: 199 LNENEKAYVNNIINQSYSRFVDAVASGRHMDREEVQRLADGRVYTGYEARDLGLVDDLGG 258 Query: 230 QEEVWQSLYALG 241 E LG Sbjct: 259 MYEAIDIAAELG 270 >gi|297529049|ref|YP_003670324.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. C56-T3] gi|297252301|gb|ADI25747.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. C56-T3] Length = 335 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 2/182 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 + Q ++ I++ D A+I+ ++SPGG I+ + K+K + KP+ + M Sbjct: 87 NHQTFLQMIKQAKEDQDVKAIILRINSPGGGVAESAEIYDQLMKLKKKTNKPIYVSMGAM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+ A + I A+ ++ GSIGV+ Q + K GV + ++KS P K +P Sbjct: 147 AASGGYYIAAAGDKIFASPETITGSIGVIMQSVNYEGLAKKYGVELVTIKSGPYKDIMNP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ +++Q +++ SY FV +V++ R +P D L+DGRI+ G +AK + L+D Sbjct: 207 ARKMTEAEREILQQLINDSYDAFVDVVAKGRKLPEDTVRKLADGRIYDGRQAKALLLVDE 266 Query: 227 VG 228 G Sbjct: 267 FG 268 >gi|78049494|ref|YP_365669.1| protease IV [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037924|emb|CAJ25669.1| protease IV [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 633 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDDSAT-ALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ RI R +RDD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ GR+W+GA+AK+ GL+D GG E Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEA 541 >gi|325846372|ref|ZP_08169341.1| signal peptide peptidase SppA, 36K type [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481556|gb|EGC84596.1| signal peptide peptidase SppA, 36K type [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 333 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 118/201 (58%), Gaps = 5/201 (2%) Query: 33 DNSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 D+ +A ++ G I D Q + +++++ + DDS +I+ ++SPGG+ Y E I Sbjct: 64 DSKNKIAVLSYEGAIGDGQVYDDFMDQLDDVYDDDSVKGVIMQVNSPGGAVYNSEQIANK 123 Query: 90 IQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+K++ K PV T + MAAS GY IS ++ I A+ +L GSIGV+ + +K Sbjct: 124 IKKIQKDKKIPVFTVMKTMAASGGYYISAPTDRIYASNETLTGSIGVIMSSTSFQGLFEK 183 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ +++ + MK S ++ + + QD+++SS+ FV++VS+ R++ D+ L Sbjct: 184 YGIKQQNITTGKMKDAGSAGKDMTDEQKKYFQDLINSSFDRFVKIVSQGRSMKEDEVRKL 243 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 +DGR++ GA+AK GL+D +G Sbjct: 244 ADGRVYDGAQAKSNGLVDKIG 264 >gi|302828750|ref|XP_002945942.1| signal peptide peptidase [Volvox carteri f. nagariensis] gi|300268757|gb|EFJ52937.1| signal peptide peptidase [Volvox carteri f. nagariensis] Length = 683 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 6/192 (3%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 +GQ+ D+ +L ++ + D + TA++V ++SPGGSA A +++ + +++ V+ Sbjct: 357 QGQVIDATKLCRQLAALLEDSTVTAVVVRVNSPGGSALASDSLHHELVRLRAAGKVVV-- 414 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 S GY ++ A++ IVA SL GSIGVLF YV L++ G+ + V Sbjct: 415 ----VSGGYYLAAAADHIVAQPGSLTGSIGVLFGKVYVGKTLEEAGIRSEGVTVGRNADA 470 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 SPF+ P M+ ++D Y F+ VS R P ++ L+ G+++TG +A +VGL Sbjct: 471 LSPFTGFTPDQEAQMEALIDHVYQDFLEKVSRGRGRPVEEVRQLAKGKVYTGRQAHEVGL 530 Query: 224 IDVVGGQEEVWQ 235 +D +GG E Q Sbjct: 531 VDELGGLETAVQ 542 >gi|183219875|ref|YP_001837871.1| peptidase PfaP [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910003|ref|YP_001961558.1| periplasmic serine protease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774679|gb|ABZ92980.1| Periplasmic serine protease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778297|gb|ABZ96595.1| Peptidase PfaP (Periplasmic flagella-associated protein; PF-associated peptidase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 321 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 104/188 (55%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + D + +++ ++SPGG+ A + IF + ++ K ++ + ++AAS GY Sbjct: 75 VLRQLRELDEDTNVKGILIEINSPGGTVAASQEIFNELLHLRKSKKIVVSMKDVAASGGY 134 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ AS+ I A ++ GSIGV+ P VK LD+ GV +++ K+ K SPF + Sbjct: 135 YIAAASDYIFAENGTITGSIGVISFAPNVKGLLDRYGVGVRTYKAGKYKDMYSPFRDSTN 194 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + M+ + +Y FV V++ RN L++G+I++G +A + L+D +GG+ E Sbjct: 195 EEDDMIGKQLQDTYRKFVEDVAKGRNKTVKSIEELAEGKIYSGEDAFRNKLVDDIGGRRE 254 Query: 233 VWQSLYAL 240 + L L Sbjct: 255 AHKKLSEL 262 >gi|15678828|ref|NP_275945.1| protease IV [Methanothermobacter thermautotrophicus str. Delta H] gi|2621896|gb|AAB85306.1| protease IV [Methanothermobacter thermautotrophicus str. Delta H] Length = 287 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 136/260 (52%), Gaps = 23/260 (8%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE----------DSQELIERIERISRD 63 +++++++ + S + +E +A I + G I D ++ E I + D Sbjct: 11 LVAVLSIAGLVLSLAGLLEGGEGTIAIIPVHGAIAYDTAGFSDGVDPDDIKELIAEANSD 70 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 S A+++ ++SPGG+ A E + AI K + KPV++ + + S YL + AS+ IVA Sbjct: 71 PSVKAIVLDINSPGGTPVASEELMDAINK--SEKPVVSWISDSGTSGAYLAASASDRIVA 128 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + ++ VGSIGV+ + ++G++ ++K+ K + + + + QM+Q +V+ Sbjct: 129 SPSAWVGSIGVILDLTDLSQMYRQMGINKYAIKAGEYKDMGADYRMITDEERQMLQSMVN 188 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y +F++ V+ +RN+ L++GRI+TG +A + L+D GG++ YA+ V Sbjct: 189 EEYDYFIKTVAANRNLSVSYVKSLAEGRIFTGRQAVRNRLVDFTGGKD------YAVEVA 242 Query: 244 QSIRKIKDWN-----PPKNY 258 + +K++N PP + Sbjct: 243 AKLAGVKNYNTITLEPPSGF 262 >gi|183599305|ref|ZP_02960798.1| hypothetical protein PROSTU_02769 [Providencia stuartii ATCC 25827] gi|188021539|gb|EDU59579.1| hypothetical protein PROSTU_02769 [Providencia stuartii ATCC 25827] Length = 622 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 14/263 (5%) Query: 29 SHVEDNSPHVARIAIRGQIED--------SQELIERIERISR-DDSATALIVSLSSPGGS 79 S + ++A I ++G I D S +LI R +R +++ A+I+ ++SPGGS Sbjct: 326 SETSATAGNIAVIIVQGAIMDGPQSPGIASGDLISSQIREARLNENIKAIILRVNSPGGS 385 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A + I + + KPV+ + MAAS GY +S +N IVA+ ++ GSIG+ Sbjct: 386 VTASDLIRNELASARAAGKPVVVSMGGMAASGGYWVSTPANYIVASPNTITGSIGIFGVI 445 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + LD +GV V ++P+ A+ S ++P+ MMQ +++ Y F+ LV++SRN Sbjct: 446 NTFENALDSVGVYTDGVSTTPL-ADISATKGISPEFSDMMQITIENGYKTFIGLVAKSRN 504 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 ++ ++ GR+W G++AKK+GL+D +G ++ L + DW P+ Sbjct: 505 KTPEEIDKIAQGRVWIGSDAKKIGLVDQLGDFDDAVTKAAELAKLNDVS--LDWMQPE-L 561 Query: 259 WFCDLKNLSISSLLEDTIPLMKQ 281 F D L +SS + +P + Q Sbjct: 562 SFMDQLILELSSTAQAVMPDILQ 584 >gi|6690270|gb|AAF24059.1|AF114385_1 putative protease SppA [Arabidopsis thaliana] Length = 680 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 404 AEQLIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIKLLAETKPVIASMSDVAAS 463 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPS 165 GY ++ A+N IVA +L GSIGV+ + +K+G + +++ + AE Sbjct: 464 GGYYMAMAANAIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEER 523 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + P+ ++ + +Y F + SR++P DK ++ GR+WTG +A GLID Sbjct: 524 P---LKPEEAELFEKSAQHAYQLFRDKAALSRSMPVDKMEEVAQGRVWTGKDAHSRGLID 580 Query: 226 VVGG 229 VGG Sbjct: 581 AVGG 584 >gi|315453141|ref|YP_004073411.1| protease IV [Helicobacter felis ATCC 49179] gi|315132193|emb|CBY82821.1| protease IV (PspA) [Helicobacter felis ATCC 49179] Length = 285 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 138/257 (53%), Gaps = 18/257 (7%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN--SPHVARIAIRGQIEDSQELIERIE 58 ++F+ K KT V L++++F++S + ++ P++A+I + G I +S+ ++++ Sbjct: 12 LDFITKYFKT------FVFLSLLFFAFSLNKDEGHAQPNLAKIYLHGPIFESESFRDQVD 65 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 R+ + S +++ + SPGGS A + + ++ PV+ V + AS Y + Sbjct: 66 RVLKIPSIKGVLLLIDSPGGSISASVELSDIVATLRKTMPVVAYVQGVMASGSYYTGMQA 125 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQM 177 N+I A +LVGSIGV+F + +DKLG+ + + K E F+ K Q Sbjct: 126 NLIYANRGALVGSIGVIFSGANIAALMDKLGIKSQGMAKGEYK-EVGTFTRAWTDKEKQF 184 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + D++ Y+ FV V+++R + K+ + ++G+I++ +A + LID VG + Q++ Sbjct: 185 LGDLLSEQYNMFVSDVAKARGLDPKKSNIFAEGKIFSATQAANLHLIDHVGTYD---QAV 241 Query: 238 YALGVDQSIRKIKDWNP 254 YAL Q + ++K NP Sbjct: 242 YAL---QKLTQVK--NP 253 >gi|56421326|ref|YP_148644.1| protease [Geobacillus kaustophilus HTA426] gi|56381168|dbj|BAD77076.1| protease IV (signal peptide peptidase) [Geobacillus kaustophilus HTA426] Length = 335 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 2/182 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 + Q ++ I++ D A+I+ ++SPGG I+ + K+K + KP+ + M Sbjct: 87 NHQTFLQMIKQAKEDQDVKAIILRINSPGGGVAESAEIYDQLMKLKKKTNKPIYVSMGAM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+ A + I A+ ++ GSIGV+ Q + K GV + ++KS P K +P Sbjct: 147 AASGGYYIAAAGDKIFASPETITGSIGVIMQSVNYEGLAKKYGVELVTIKSGPYKDIMNP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ +++Q +++ SY FV +V++ R +P D L+DGRI+ G +AK + L+D Sbjct: 207 ARKMTEAERKILQRLINDSYDAFVDVVAKGRKLPEDTVRKLADGRIYDGRQAKALRLVDE 266 Query: 227 VG 228 G Sbjct: 267 FG 268 >gi|325959637|ref|YP_004291103.1| signal peptide peptidase SppA, 36K type [Methanobacterium sp. AL-21] gi|325331069|gb|ADZ10131.1| signal peptide peptidase SppA, 36K type [Methanobacterium sp. AL-21] Length = 312 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 145/280 (51%), Gaps = 19/280 (6%) Query: 13 VMLSLVTLTVVYFSWSSHVED--NSPHVARIAIRGQIED-----SQELI-------ERIE 58 ++++L+ TV S+ + N VA I ++G+I S E I + + Sbjct: 18 LVIALLVATVSLLGGSNFLNSAPNGDTVAVIPLQGEIGYGSSGVSGETIVTPENVKDALN 77 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + D + +++++ ++SPGGS A E I AI + K KPV+ + + AS YL + ++ Sbjct: 78 QAESDGTVSSILIKINSPGGSPVASEEIMNAINESK--KPVVVWIGDTGASGAYLAASSA 135 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+A+ +S+VGSIGV+ + + + G++ S+K+ K S + + M+ Sbjct: 136 DDIIASPSSMVGSIGVIMGLTDLSKYYENNGINKYSIKAGEYKDMGSDYRNLTTNETNML 195 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q +V+ Y F+ +V+ +RN+ + T +++G+I+TG +AK + L++ GG+++ + Sbjct: 196 QGMVNEDYAHFIDIVAVNRNLTVNYTQSIAEGKIYTGTQAKNLKLVNDTGGEKQALDAAA 255 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 LG D NP D+ N S+SS + +I L Sbjct: 256 KLGGITGSYNTIDINPSS--GLLDILN-SMSSRIAYSIGL 292 >gi|42563213|ref|NP_565077.2| SPPA; serine-type endopeptidase [Arabidopsis thaliana] gi|12325146|gb|AAG52522.1|AC016662_16 putative protease IV; 48713-44371 [Arabidopsis thaliana] gi|332197414|gb|AEE35535.1| signal peptide peptidase [Arabidopsis thaliana] Length = 677 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 401 AEQLIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIKLLAETKPVIASMSDVAAS 460 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPS 165 GY ++ A+N IVA +L GSIGV+ + +K+G + +++ + AE Sbjct: 461 GGYYMAMAANAIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEER 520 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + P+ ++ + +Y F + SR++P DK ++ GR+WTG +A GLID Sbjct: 521 P---LKPEEAELFEKSAQHAYQLFRDKAALSRSMPVDKMEEVAQGRVWTGKDAHSRGLID 577 Query: 226 VVGG 229 VGG Sbjct: 578 AVGG 581 >gi|326386909|ref|ZP_08208523.1| signal peptide peptidase SppA, 67K type [Novosphingobium nitrogenifigens DSM 19370] gi|326208589|gb|EGD59392.1| signal peptide peptidase SppA, 67K type [Novosphingobium nitrogenifigens DSM 19370] Length = 650 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 1/173 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLIS 115 I+R + +++ + SPGGS E I A+++ K PV + +AAS GY +S Sbjct: 341 IDRATASGDYAGMVLRVDSPGGSVTGAERIRAAVERFKASGLPVAVSMGNLAASGGYWVS 400 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I A ++ GSIG+ P + L K GV+ ++++P+ +PS +P+ Sbjct: 401 TPADRIFAEPATITGSIGIFAVIPSFEDSLAKFGVTTDGLRTTPLSGQPSILGGFSPEME 460 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q +D+ YH FV LVS SR+ Y ++ GR+W G A+++GL+D G Sbjct: 461 AVLQTEIDAGYHRFVGLVSASRHKSYADVDRIAQGRVWDGGTARQIGLVDEFG 513 >gi|299141026|ref|ZP_07034164.1| signal peptide peptidase SppA, 67K type [Prevotella oris C735] gi|298577992|gb|EFI49860.1| signal peptide peptidase SppA, 67K type [Prevotella oris C735] Length = 588 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 119/214 (55%), Gaps = 9/214 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ V+ SP R + ++ +E +++DD A+++ ++S GGSAYA Sbjct: 302 VYYAYGDIVDKASPQSIFQDDRQIV--GNDMCRDLEDLAKDDDVKAVVIRVNSGGGSAYA 359 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY-PYV 141 E I+ I ++K KPV+ + AAS GY +S +N IVA T++ GSIG+ + Sbjct: 360 SEQIWHQISELKKVKPVVVSMSGAAASGGYYLSSNANWIVADPTTITGSIGIFGLFLDRS 419 Query: 142 KPFLDKLGVS---IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + KL ++ +K+ ++S A PF+ P+ + ++Q+ V+ Y F + V+E R Sbjct: 420 ELYTKKLSINYAEVKTNRNSVFGASGHPFT---PEQLSLLQNNVNRGYMLFKKRVAEGRK 476 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ ++ GR+W G + K+ L+D +GG ++ Sbjct: 477 MTMEQVENIAQGRVWLGQDVIKLKLVDQLGGLDD 510 >gi|147679177|ref|YP_001213392.1| periplasmic serine proteases [Pelotomaculum thermopropionicum SI] gi|146275274|dbj|BAF61023.1| Periplasmic serine proteases [Pelotomaculum thermopropionicum SI] Length = 310 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 25/224 (11%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAA 108 S+++ + +R+ A+++ L+SPGG+A A + I ++++K + K V+ + + AA Sbjct: 66 SEQVTSALRNAARNPDLKAVVIRLNSPGGTAAAAQEISAEVERLKRSGKKVVASMGDSAA 125 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y I+ ++ IVA +L GSIGV+ QY ++ K+GV ++ KS P K SP Sbjct: 126 SGAYWIAACADQIVANPGTLTGSIGVIIQYLNLEELYSKIGVDTETFKSGPHKDMGSPSR 185 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + Q ++D Y+ FV +V+ R+ + L+DGRI+TG +AK++GL+D +G Sbjct: 186 PATAEERAIFQSMIDDIYNQFVDVVARGRHKDPAEIRPLADGRIFTGRQAKELGLVDRLG 245 Query: 229 ------------------------GQEEVWQSLYALGVDQSIRK 248 G + +WQ L+A + RK Sbjct: 246 DLHDAVLLAGELAGIKGEPAVVEIGPKNIWQELFAGAGGNTFRK 289 >gi|190576019|ref|YP_001973864.1| putative protease IV [Stenotrophomonas maltophilia K279a] gi|190013941|emb|CAQ47581.1| putative protease IV [Stenotrophomonas maltophilia K279a] Length = 640 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 10/207 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDD-SATALIVSLSSPGGSAYAG 83 DN P VA + G+I RI R +RDD + A+++ + SPGG +A Sbjct: 338 DNRPQVAVVVAAGEISGGDLPAGRIGGESTSALLRAARDDENVKAVVLRVDSPGGEVFAS 397 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + ++ KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 398 EQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGMVPNFS 457 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q V++ Y F V+++R P + Sbjct: 458 RALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQSVINKGYADFTGRVADARKKPVE 517 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GR+W+GA+AK+ GL+D GG Sbjct: 518 AVDEVARGRVWSGAQAKERGLVDAFGG 544 >gi|295399533|ref|ZP_06809515.1| signal peptide peptidase SppA, 36K type [Geobacillus thermoglucosidasius C56-YS93] gi|294978999|gb|EFG54595.1| signal peptide peptidase SppA, 36K type [Geobacillus thermoglucosidasius C56-YS93] Length = 336 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 11/229 (4%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF--RAIQKVKNRKPVITEVHEM 106 D + + IE+ DD+ A+I+ + SPGG I K + +KP+ + M Sbjct: 87 DHRAFLRMIEQAKNDDTVKAIILRVDSPGGGVVESAEIHDQLLKLKKETKKPIYVSMGTM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS A++ I A+ +L GS+GV+ Q + K GV + ++KS P K +P Sbjct: 147 AASGGYYISTAADKIFASPETLTGSLGVIIQSFNYEGLAKKYGVELVTIKSGPYKDIMNP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ + +++Q ++ +SY FV+++SE R++P + ++DGRI+ G +AK++ LID Sbjct: 207 ARKMTEEEKEILQRLIHNSYEGFVKVISEGRHLPESEVRKIADGRIYDGRQAKQLKLIDE 266 Query: 227 VGGQEEVWQSL---YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 G E+ ++ Y L Q ++ D++ F L + +S ++ Sbjct: 267 FGYLEDTIAAIKKDYDLADAQVVKYTNDFS------FGSLFKMELSRMI 309 >gi|282897594|ref|ZP_06305594.1| Peptidase S49, protease IV [Raphidiopsis brookii D9] gi|281197517|gb|EFA72413.1| Peptidase S49, protease IV [Raphidiopsis brookii D9] Length = 607 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 12/217 (5%) Query: 25 FSWSSHVEDNSPHVARIAI--------RGQIEDSQELIERIERISR----DDSATALIVS 72 + +S +E+ +IA+ G+ E SQ +R RI R D ++++ Sbjct: 301 YVQASEIEEQQNSQNKIAVVYAEGEIVDGEGESSQIGGDRYARILRKIRQDQDIKSVVLR 360 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGGSA A E I R IQ K KPVI + ++AAS GY I+ S+ I A +L GSI Sbjct: 361 VNSPGGSATASEIIEREIQLTKQVKPVIVSMGDIAASGGYWIASNSDHIFAEPGTLTGSI 420 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV + + G++ +VK+S + +P+ + + Q V+ Y+ F+ Sbjct: 421 GVFGVLLNGQKLANNNGITWDTVKTSEFADSQTVSRPKSPQELAIYQRSVNRIYNMFINK 480 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 V + R +P K ++ GR+W+GA AK++GL+D +GG Sbjct: 481 VVQGRKLPETKVGEIAQGRVWSGATAKEIGLVDEIGG 517 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 11/210 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR----AIQKVKNRKPVITEVHEM 106 ++LI +E+ + D + +++S + G A R A++K + I Sbjct: 87 RQLIGALEQAAEDQRIVGIYINVSESSKVSSLGYASLREIRQALEKFRASGKKIIAYGVG 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EP 164 + Y +S +N I ++ G+ Q ++ L K G+ ++ V+ K EP Sbjct: 147 WSEREYYLSSVANKIFLNPVGMIEINGLSSQPIFLTGALQKYGIGVQVVRVGKFKGAVEP 206 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGL 223 +++P+ + Q ++D + + V +SR I P + ++ + +AK GL Sbjct: 207 LVLDKLSPENREQTQQLLDDLWGEWRNSVGKSRKISPEILQEIANNQGVLEAKDAKDNGL 266 Query: 224 IDVVGGQEEVWQSLYALGVD----QSIRKI 249 ID V ++V L +G +S R+I Sbjct: 267 IDEVAYTDQVVADLKTIGTSDNDGKSFRQI 296 >gi|225010434|ref|ZP_03700905.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-3C] gi|225005263|gb|EEG43214.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-3C] Length = 586 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 3/223 (1%) Query: 50 SQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 QEL IE IE + S A+++ ++SPGGSA + I+ AI+K K KPV+ + ++AA Sbjct: 323 GQELTIEGIEAAVENSSVKAIVLRVNSPGGSALVSDLIWHAIEKAKAVKPVVVSMGDVAA 382 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ +N I A+ ++ GSIGV P + + GV+ + V + A S F Sbjct: 383 SGGYYIAAGANKIFASPATITGSIGVFGVLPNMSQLAKEWGVNAQEVATHDNGATYSVFR 442 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ K + ++ +Y F+ VS R + D+ L+ GR+WT A GLID +G Sbjct: 443 PMSEKFKALTVQSIEDTYQTFLSRVSSGRGMTVDQVDALAQGRVWTAEAALAGGLIDGIG 502 Query: 229 GQEEVWQSLYALG--VDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + LG D IR + P DL +S S Sbjct: 503 DLDVAIAEAALLGGASDYGIRNYPKYKSPFEQLIEDLSGVSTS 545 >gi|23306358|gb|AAN17406.1| Unknown protein [Arabidopsis thaliana] gi|28058917|gb|AAO29968.1| Unknown protein [Arabidopsis thaliana] Length = 388 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 112 AEQLIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIKLLAETKPVIASMSDVAAS 171 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPS 165 GY ++ A+N IVA +L GSIGV+ + +K+G + +++ + AE Sbjct: 172 GGYYMAMAANAIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEER 231 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P P+ ++ + +Y F + SR++P DK ++ GR+WTG +A GLID Sbjct: 232 PL---KPEEAELFEKSAQHAYQLFRDKAALSRSMPVDKMEEVAQGRVWTGKDAHSRGLID 288 Query: 226 VVGG 229 VGG Sbjct: 289 AVGG 292 >gi|312886123|ref|ZP_07745742.1| signal peptide peptidase SppA, 67K type [Mucilaginibacter paludis DSM 18603] gi|311301363|gb|EFQ78413.1| signal peptide peptidase SppA, 67K type [Mucilaginibacter paludis DSM 18603] Length = 589 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 110/204 (53%), Gaps = 7/204 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+++ + ++ +D A+++ ++SPGGS+ A + I+R + K KPVI + + AAS Sbjct: 330 SEKVSAALRKVRLNDKIKAVVLRVNSPGGSSLASDVIWREVLLTKKAKPVIVSMGDYAAS 389 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFS 168 GY I+CA++ I A ++ GSIG+ P ++ F DKLG++ VK+ Sbjct: 390 GGYYIACAADSIYAEPNTITGSIGIFAMLPNMQKFFNDKLGLTFDGVKTGKFADLGDVSR 449 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + P+ ++Q V+ Y F + V++ R+ + GR+WTG++A K+GL+D +G Sbjct: 450 PLTPEERMILQAQVNRGYDTFTKAVADGRHKTQAYINSIGQGRVWTGSQAIKIGLVDKLG 509 Query: 229 GQEEVWQSLYALGVDQSIRKIKDW 252 + +S + K+KD+ Sbjct: 510 NINDAIRSAAKMA------KLKDY 527 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 48/229 (20%), Positives = 92/229 (40%), Gaps = 15/229 (6%) Query: 21 TVVYFSWSSHVEDNSPH--VARIAIRGQIEDS----QELIERIERISRDDSATALIVSLS 74 +V+ + SS + + +P +A + G D +++ I + D + + + S Sbjct: 46 SVLRIALSSSIAERTPDNPLAELGFLGLNGDKAIGLNDILANIRKAKTDSNIKGIFLDES 105 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S E I A+ K I E+ + + Y ++ ++ + + G Sbjct: 106 SMASGQATTEEIRNALIDFKKSGKFIIAYSEIYSQSFYYLASVADKVYMNPKGIFEFHGF 165 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-----SEVNPKAVQMMQDVVDSSYHWF 189 Q + K LDKLG+ ++ +K K+ PF S+ N V + S Y F Sbjct: 166 SSQITFFKGALDKLGIDMQIIKVGTYKSAVEPFFLDKMSDANRMQVNAY---LGSLYDHF 222 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDVVGGQEEVWQSL 237 + +S SR I D +++ + E A K L+D + ++E+ L Sbjct: 223 LTGISASRKINKDSLANIANNLLIQNPEDAVKYKLLDGLKYKDELLDEL 271 >gi|182415685|ref|YP_001820751.1| signal peptide peptidase SppA, 67K type [Opitutus terrae PB90-1] gi|177842899|gb|ACB77151.1| signal peptide peptidase SppA, 67K type [Opitutus terrae PB90-1] Length = 656 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 2/185 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + R+ +DDS A+++ ++SPGGSA A E I R I+ + KPVI + AAS GY IS Sbjct: 399 LRRLRQDDSVKAIVLRVNSPGGSASASETIQREIRLAREVKPVIVSMGSYAASGGYWISA 458 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + I A T++ GSIGV V+ + G++ SVK+ + P+ + Sbjct: 459 YGDRIFAEPTTVTGSIGVFGIMFDVQKLFNGWGLTFDSVKTGRFADTLTIARPKTPEEMA 518 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + Q VD Y FV V E R++ + ++ GR+W+G EAKK+GL+D +GG + + Sbjct: 519 LFQRSVDWIYDQFVSKVVEGRHLAREHVEEIAQGRVWSGVEAKKLGLVDELGGLDAAIR- 577 Query: 237 LYALG 241 YA G Sbjct: 578 -YAAG 581 >gi|254508475|ref|ZP_05120594.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus 16] gi|219548587|gb|EED25593.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus 16] Length = 616 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 117/211 (55%), Gaps = 11/211 (5%) Query: 26 SWSSHVEDNSPHVARIAI------RGQIEDSQELIERIERISR-DDSATALIVSLSSPGG 78 S+S+ D + VA AI RG + + + + R +R DD A+++ + SPGG Sbjct: 319 SFSTSANDIAVVVASGAIMDGSQPRGTV--GGDTVAALLRQARNDDKVKAVVLRVDSPGG 376 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 377 SAFASEVIRNEIEALKEAGKPVVASMSSLAASGGYWISMSADRIVAQPTTLTGSIGIFSV 436 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L++LGV V +SP ++ + ++ A + Q ++ Y F +LVS++R Sbjct: 437 ITTFEKGLNELGVYTDGVGTSPF-SDVGVTTGLSEGAAEAFQLGIEHGYKRFTQLVSDNR 495 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 NI + ++ GR+WTG +A K GL+D +G Sbjct: 496 NISLTQLDNIAQGRVWTGQDAMKFGLVDSIG 526 >gi|294617411|ref|ZP_06697045.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1679] gi|291596317|gb|EFF27576.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1679] Length = 341 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ I D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHKNFMEQLKAIEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FV +VSE RN ++ ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEETVLQAYIDSAYSRFVAIVSEGRNKSEEEVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ +++ Sbjct: 265 LGFPEDALKAM 275 >gi|317970537|ref|ZP_07971927.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CB0205] Length = 270 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 116/198 (58%), Gaps = 2/198 (1%) Query: 38 VARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARIAI G I +++ + + R AL++ + SPGG+ + I A+ +++ + Sbjct: 13 LARIAIEGPIASGTRKRVLKALREVEKREFPALLLRIDSPGGTVGDSQEIHAALLRLREK 72 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + VI ++AS G I A++ IVA S+ GSIGV+ + + L+++G+ ++V Sbjct: 73 QCKVIASFGNISASGGVYIGVAADKIVANPGSITGSIGVILRGNNLSRLLERIGIQFETV 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS K SP ++ Q++Q+++DSSY FV V+E R + D+ +DGR+++G Sbjct: 133 KSGIYKDILSPDRALSSGERQVLQELIDSSYGQFVSAVAEGRGLSEDEVRRFADGRVFSG 192 Query: 216 AEAKKVGLIDVVGGQEEV 233 A+A+++GL+D +G +E+ Sbjct: 193 AQAQELGLVDALGDEEQA 210 >gi|312283239|dbj|BAJ34485.1| unnamed protein product [Thellungiella halophila] Length = 682 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 406 AEQLIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIKLLAESKPVIASMSDVAAS 465 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPS 165 GY ++ A+N IVA +L GSIGV+ + +K+G + +++ + AE Sbjct: 466 GGYYMAMAANTIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEER 525 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF P+ ++ +Y F + SR++P DK ++ GR+WTG +A GL+D Sbjct: 526 PF---KPEEAELFGKSAQHAYQLFRDKAALSRSMPVDKMEEVAQGRVWTGKDAHSRGLVD 582 Query: 226 VVGG 229 +GG Sbjct: 583 ALGG 586 >gi|240950308|ref|ZP_04754583.1| protease IV, signal peptide peptidase [Actinobacillus minor NM305] gi|240295210|gb|EER46018.1| protease IV, signal peptide peptidase [Actinobacillus minor NM305] Length = 622 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 84/282 (29%), Positives = 148/282 (52%), Gaps = 37/282 (13%) Query: 4 VLKKIKTRYVMLSLVT-----------LTVVYFSWSSHVED----NSPH-VARIAIRGQI 47 ++ ++KTR M L+ ++ Y +++ + D +P+ +A I I G+I Sbjct: 278 LINEVKTRAEMRQLLVEKFGADEENDFKSIRYDDYATDLPDRFNRKAPNKIAVINIEGEI 337 Query: 48 ------EDS---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 ED+ LI +++R+ +D + LI+ ++SPGGSA A E I + ++ ++ Sbjct: 338 TMGESLEDTAGADTLIRQLQRVRQDKTVRGLILRINSPGGSALASELIRQEVEAIQQAGI 397 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG---VLFQYPYVKPFLDKLGVSIKS 154 PV++ + MAAS GY I+ S+ IVA +L GSIG VLF + LGV Sbjct: 398 PVVSSMGGMAASGGYWIAATSDAIVADPNTLTGSIGIFGVLFNFEKTA---QNLGVREDG 454 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + +SP+ AE S ++ +++Q V+ Y F+ LVS R + K ++ G++W Sbjct: 455 ISTSPL-AEISGLKPLSSHQSELIQMSVEQGYREFLDLVSRGRKMDLAKVDQIAQGQVWL 513 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G +A+ +GL+D +G ++ +L LG + RK+K+ N P+ Sbjct: 514 GQKAQSLGLVDQLGNFDD---TLALLG-NLINRKLKEQNKPE 551 >gi|296134407|ref|YP_003641654.1| signal peptide peptidase SppA, 36K type [Thermincola sp. JR] gi|296032985|gb|ADG83753.1| signal peptide peptidase SppA, 36K type [Thermincola potens JR] Length = 315 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAA 108 ++ ++E++ ++D S A+I+ ++SPGG+ A + I ++KV K K V+ + ++AA Sbjct: 65 AESIMEQLREAAKDKSLKAVIIRINSPGGTVAASQEIGEEVEKVRKAGKKVVISMGDVAA 124 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ + IVA ++ GSIGV+ + + +K+G++ +S+KS K SP Sbjct: 125 SGGYWIAAKGDKIVANPGTVTGSIGVIMESLNMSDLYNKVGIADQSIKSGAHKDMGSPSR 184 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + ++Q +VD ++ FV +V++ R + + L ++DGR++TG +AK +GL+D +G Sbjct: 185 PLTQEEKVILQSMVDDMFNQFVDVVAKGRRMKREDVLKIADGRVFTGRQAKSLGLVDELG 244 >gi|257875577|ref|ZP_05655230.1| protease/peptidase [Enterococcus casseliflavus EC20] gi|257809743|gb|EEV38563.1| protease/peptidase [Enterococcus casseliflavus EC20] Length = 343 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 15/228 (6%) Query: 33 DNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 D + R+++ G I D Q +E + I D + +++ +++PGG Sbjct: 59 DQDNRIVRLSLEGTIASSSSGGLFTTESYDHQRFLEELRMIQEDPTIGGILMEVNTPGGG 118 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I R + K+K P+ + MAAS GY IS ++ I A + ++ GSIGV+ Sbjct: 119 VYESAEIARELAKIKELGIPMYVSMKNMAASGGYYISAGADKIFATDETITGSIGVIMSG 178 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +KLG+ + KS +K S + +++Q VD++Y FV++V+E R Sbjct: 179 LNYAGLFEKLGIEDNTYKSGALKDVGSATRKPTEADKEVLQTYVDNAYGRFVKIVAEGRG 238 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQS 245 + + ++DGRI+ G +A VGL+D +G E+ ++ A LG++ + Sbjct: 239 MTEEAVRKIADGRIYDGQQAVSVGLVDEIGFPEDTLAAMQADLGLEDA 286 >gi|325955083|ref|YP_004238743.1| signal peptide peptidase SppA, 67K type [Weeksella virosa DSM 16922] gi|323437701|gb|ADX68165.1| signal peptide peptidase SppA, 67K type [Weeksella virosa DSM 16922] Length = 591 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 105/187 (56%), Gaps = 7/187 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+ E I ++ DD A+++ ++SPGGSA A E I + ++ +KPV+ ++AAS Sbjct: 331 SKTYTEAIREMAEDDKIKAVVLRINSPGGSANASEQILYELDLLRKKKPVVVSFGDVAAS 390 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPS 165 GY I+ +S I A +++ GSIGVL P VK + +G++ K++ +K+ + Sbjct: 391 GGYYIAQSSERIFANPSTITGSIGVLGMIPNVKKLANSVGITTDIAKTNANADQLKSLTN 450 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P S A + M+ ++ YH FV +S++R + ++ + G +W+G AK++GLID Sbjct: 451 PLS---ADAERTMRKNIELIYHQFVSHISKNRKMTFEAVDKVGGGHVWSGTRAKELGLID 507 Query: 226 VVGGQEE 232 G ++ Sbjct: 508 EFGNLQD 514 >gi|33861736|ref|NP_893297.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640104|emb|CAE19639.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 269 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 37 HVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I I S + ++ +++I D ALI+ + SPGG+ + I+ AI+++K Sbjct: 12 RMARIVIDEPITSSTRVSVLKALKQIE-DREFPALILRIDSPGGTVGDSQEIYSAIKRLK 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V+ ++AS G I AS+ IVA ++ GSIGV+ + + L+K+G+ + Sbjct: 71 EKGCKVVASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLNKIGIKFE 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP ++ + +++Q +++ SY F VSE RN+ D +DGRI+ Sbjct: 131 TVKSGIYKDILSPDKPLSKEGRELLQGLINESYKQFTEAVSEGRNLLVDDVKKFADGRIF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA 239 TG +AK +GL+D + G E V + L A Sbjct: 191 TGTQAKDLGLVDKI-GDEFVARELAA 215 >gi|293568086|ref|ZP_06679423.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1071] gi|291589168|gb|EFF20979.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1071] Length = 341 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ I D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHKNFMEQLKAIEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIISGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FV +VSE RN ++ ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEETVLQAYIDSAYSRFVAIVSEGRNKSEEEVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ +++ Sbjct: 265 LGFPEDALKAM 275 >gi|86608144|ref|YP_476906.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556686|gb|ABD01643.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] Length = 384 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 21/214 (9%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGY 112 +E++ +RD S A+++ ++SPGG+ + + ++RA+ + KPVI + +AAS GY Sbjct: 114 VEQLREAARDPSVKAVLLRINSPGGAVGSSQELYRAVTALHEADKPVIAILENIAASGGY 173 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ A++ I A +L GSIG + L+ G+ ++ K+ K SPF P Sbjct: 174 YVASAADKIYANPGTLTGSIGAIISGLSFGKLLENYGIEPQTFKTGEYKDLLSPFRSATP 233 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESR--------------------NIPYDKTLVLSDGRI 212 + +++Q++V+ + F+R V++ R ++ D+ L+DGRI Sbjct: 234 QEQRLLQNLVEDTLEQFIRDVAQGRQHLPEKADEVLEAEMIARRQSLDEDRVRQLADGRI 293 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +TGA+A +VGL+D +GG E + L + D S+ Sbjct: 294 FTGAQAVEVGLVDALGGYTEAVEDLRRMTGDPSL 327 >gi|16331410|ref|NP_442138.1| protease IV [Synechocystis sp. PCC 6803] gi|2499885|sp|Q55682|Y021_SYNY3 RecName: Full=Putative protease slr0021 gi|1001581|dbj|BAA10208.1| protease IV [Synechocystis sp. PCC 6803] Length = 277 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 122/223 (54%), Gaps = 5/223 (2%) Query: 37 HVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI + G I +++ + + + + AL+V + SPGG+ + I+ ++++ Sbjct: 12 KIARIEVTGAIASGTRKAVLKALKTVEEKKYPALLVRIDSPGGTVVDSQEIYTKLKQLSE 71 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + V+ ++AS G I+ I+A ++ GSIGV+ + ++ L+K+GVS K + Sbjct: 72 KIKVVASFGNISASGGVYIAMGCPHIMANSGTITGSIGVILRGNNLERLLEKVGVSFKVI 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS P K S E+ P+ ++Q ++D SY FV V+ RN+ +K +DGRI+TG Sbjct: 132 KSGPYKDILSFDRELLPEEQSILQALIDDSYGQFVSTVAAGRNLAVEKVKEFADGRIFTG 191 Query: 216 AEAKKVGLIDVVGGQEEVWQ---SLYALGVDQ-SIRKIKDWNP 254 +A ++GL+D +G +E+ Q +L L D+ + I+D P Sbjct: 192 QQALELGLVDRLGTEEDARQWAATLAGLDPDKVELDTIEDPKP 234 >gi|282896623|ref|ZP_06304638.1| Peptidase S49, SppA [Raphidiopsis brookii D9] gi|281198493|gb|EFA73379.1| Peptidase S49, SppA [Raphidiopsis brookii D9] Length = 273 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 114/198 (57%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I S + ++E I+ + + AL++ + SPGG+ + I+ A++++ Sbjct: 12 QIARIEITGAIASSTRKRVLEAIKTVE-ERKFPALLLRIDSPGGTVGDSQEIYGALKELG 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K Sbjct: 71 KKTKIVASFGNISASGGVYIGMGAKHIMANPGTITGSIGVILRGNNLERLLEKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ ++Q+++D SY F++ V+++R +P + +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTQPEENILQELIDVSYQQFIQTVAQARALPIETVKTFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A +G++D +G +E+ Sbjct: 191 GEQALNLGVVDRLGTEED 208 >gi|257878473|ref|ZP_05658126.1| protease/peptidase [Enterococcus faecium 1,230,933] gi|257812701|gb|EEV41459.1| protease/peptidase [Enterococcus faecium 1,230,933] Length = 341 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ I D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHKNFMEQLKAIEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FV +VSE RN ++ ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEEAVLQAYIDSAYSRFVAIVSEGRNKSEEEVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ +++ Sbjct: 265 LGFPEDALKAI 275 >gi|94971132|ref|YP_593180.1| signal peptide peptidase A [Candidatus Koribacter versatilis Ellin345] gi|94553182|gb|ABF43106.1| signal peptide peptidase A [Candidatus Koribacter versatilis Ellin345] Length = 303 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 132/258 (51%), Gaps = 7/258 (2%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN- 95 +A + + G I D + ++ ++++ D S A+I+ ++SPGG A A E I+R +++V++ Sbjct: 49 RIAVVDLEGVIVDPKSVVAQLKKYGDDSSIKAIILHINSPGGGAAASEEIYREVRRVRDE 108 Query: 96 -RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 K ++ + + AS Y ++ A+N I A E S+VGSIGV+ ++ L + + Sbjct: 109 KHKRIVASIETVGASGAYYVASATNKIYANEASIVGSIGVIAEWYNYADLLKWAKLKEIT 168 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +K+ K SP ++ P MQ ++D + F+ V+ R + + ++DGR+WT Sbjct: 169 MKAGEFKDTGSPTRDMTPAEKAYMQALIDDMHSQFIHNVATGRKVKDEDIRPIADGRVWT 228 Query: 215 GAEAKKVGLIDVVGG-QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 G +A + LID + Q V + ++G+ + K+ DL +S L+ Sbjct: 229 GRQALPMKLIDQIADFQATVADTAKSVGISGEPTLVTPERERKS--LLDLMFGDVSDLIP 286 Query: 274 DTIPLMKQTKVQGLWAVW 291 D LM QT V G + +W Sbjct: 287 DRAKLM-QTNV-GFYYLW 302 >gi|119774858|ref|YP_927598.1| signal peptide peptidase SppA, 67K type [Shewanella amazonensis SB2B] gi|119767358|gb|ABL99928.1| signal peptide peptidase SppA, 67K type [Shewanella amazonensis SB2B] Length = 617 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 97/167 (58%), Gaps = 2/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DDS AL++ + SPGGSA+A E I + + +K KPV+ + MAAS GY IS +++ I Sbjct: 364 DDSIKALVLRVDSPGGSAFASEEIRQELLALKAAGKPVVVSMGSMAASGGYWISASADYI 423 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A T+L GSIG+ + L +GV V +S A SPF ++PK +Q Sbjct: 424 YATPTTLTGSIGIFGLMTTFEDSLAAIGVHADGVATSEWAAH-SPFRPLSPKLESAIQRN 482 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ Y F+ LV+ R++ ++ ++ GR+W+G +A ++GL+D +G Sbjct: 483 IERGYKEFITLVANERDMTLEQVDAIAQGRVWSGKKALELGLVDEIG 529 >gi|303252103|ref|ZP_07338272.1| protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248290|ref|ZP_07530316.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649085|gb|EFL79272.1| protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855224|gb|EFM87401.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 618 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLQKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEISEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|257882895|ref|ZP_05662548.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257889327|ref|ZP_05668980.1| protease/peptidase [Enterococcus faecium 1,231,410] gi|257894340|ref|ZP_05673993.1| protease/peptidase [Enterococcus faecium 1,231,408] gi|258616002|ref|ZP_05713772.1| protease/peptidase protein [Enterococcus faecium DO] gi|260560062|ref|ZP_05832240.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261207449|ref|ZP_05922135.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289565860|ref|ZP_06446301.1| signal peptide peptidase sppA [Enterococcus faecium D344SRF] gi|293559811|ref|ZP_06676329.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1162] gi|294623410|ref|ZP_06702266.1| putative protease [Enterococcus faecium U0317] gi|314939698|ref|ZP_07846922.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a04] gi|314942226|ref|ZP_07849078.1| signal peptide peptidase SppA [Enterococcus faecium TX0133C] gi|314948859|ref|ZP_07852229.1| signal peptide peptidase SppA [Enterococcus faecium TX0082] gi|314950801|ref|ZP_07853873.1| signal peptide peptidase SppA [Enterococcus faecium TX0133A] gi|314992218|ref|ZP_07857658.1| signal peptide peptidase SppA [Enterococcus faecium TX0133B] gi|314995223|ref|ZP_07860336.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a01] gi|257818553|gb|EEV45881.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257825687|gb|EEV52313.1| protease/peptidase [Enterococcus faecium 1,231,410] gi|257830719|gb|EEV57326.1| protease/peptidase [Enterococcus faecium 1,231,408] gi|260073897|gb|EEW62221.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260078340|gb|EEW66045.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289162320|gb|EFD10179.1| signal peptide peptidase sppA [Enterococcus faecium D344SRF] gi|291597176|gb|EFF28371.1| putative protease [Enterococcus faecium U0317] gi|291606230|gb|EFF35646.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1162] gi|313590553|gb|EFR69398.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a01] gi|313593218|gb|EFR72063.1| signal peptide peptidase SppA [Enterococcus faecium TX0133B] gi|313597016|gb|EFR75861.1| signal peptide peptidase SppA [Enterococcus faecium TX0133A] gi|313598998|gb|EFR77843.1| signal peptide peptidase SppA [Enterococcus faecium TX0133C] gi|313641033|gb|EFS05613.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a04] gi|313644732|gb|EFS09312.1| signal peptide peptidase SppA [Enterococcus faecium TX0082] Length = 341 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 2/191 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ I D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHKNFMEQLKAIEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A E ++ GSIGV+ L+KLGV +VKS +K S Sbjct: 145 AASGGYYISAQADKIFATEETVTGSIGVIMSGLNYSGLLEKLGVEDTTVKSGALKDMGSG 204 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++Q +DS+Y FV +VSE RN ++ ++DGRI+ G +AK+VGL+D Sbjct: 205 TRPETKEEEAVLQAYIDSAYSRFVAIVSEGRNKSEEEVKKIADGRIYDGVQAKEVGLVDE 264 Query: 227 VGGQEEVWQSL 237 +G E+ +++ Sbjct: 265 LGFPEDALKAI 275 >gi|148240231|ref|YP_001225618.1| periplasmic serine proteases (ClpP class) [Synechococcus sp. WH 7803] gi|147848770|emb|CAK24321.1| Periplasmic serine proteases (ClpP class) [Synechococcus sp. WH 7803] Length = 270 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 111/194 (57%), Gaps = 2/194 (1%) Query: 41 IAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-P 98 IAI G I S + + + R ++ AL++ + SPGG+ + I A+ +++ + Sbjct: 16 IAIEGAISGSTRRRVLKALREVQEREFPALLLRIDSPGGTVGDSQEIHAALLRLRAKGCR 75 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ ++AS G + A+ IVA ++ GSIGV+ + + L+K+G+ ++VKS Sbjct: 76 VVASFGNISASGGVYVGVAAETIVANPGTITGSIGVILRGNNLSELLNKIGIRFETVKSG 135 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K SP ++ Q++QD++DSSY FV V+E R + D +DGR+++GA+A Sbjct: 136 AYKDILSPDRALSADERQLLQDLIDSSYDQFVAAVAEGRGLEPDAVKAFADGRVFSGAQA 195 Query: 219 KKVGLIDVVGGQEE 232 K++GL+D +G +E+ Sbjct: 196 KELGLVDELGDEEQ 209 >gi|71901706|ref|ZP_00683780.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] gi|71728523|gb|EAO30680.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] Length = 630 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 104/179 (58%), Gaps = 5/179 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFR---AIQKVKNRKPVITEVHEMAASAGYL 113 + ++ +D+ A+++ ++SPGG +A E I R A++KV KPV+ + +MAAS GY Sbjct: 361 LRKVRDEDAVKAVVLRVNSPGGEVFASEQIRREVVALRKVG--KPVVVSMGDMAASGGYW 418 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS ++ I A +++ GSIG+ P + LDK+GV V ++ ++P+ Sbjct: 419 ISMDADRIYADPSTISGSIGIFGLVPNITRTLDKVGVHTDGVGTTRFAGALDITRALDPQ 478 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q+ Q+V+D Y F V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 479 VGQIFQNVIDKGYADFTTKVAQARHRSVKEIDSIARGRVWSGAQAKERGLVDELGGVRE 537 >gi|113475281|ref|YP_721342.1| signal peptide peptidase A [Trichodesmium erythraeum IMS101] gi|110166329|gb|ABG50869.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Trichodesmium erythraeum IMS101] Length = 608 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 108/182 (59%), Gaps = 6/182 (3%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L +++ ++ D+ A+++ ++SPGGSA A E I R ++ + KPVI + +AAS GY Sbjct: 346 LAKKLRQLRLDEKVKAVVLRVNSPGGSASASEVISREVKLMSEEKPVIVSMGNIAASGGY 405 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFSE 169 IS ++ IVA ++ GSIGV ++ ++ G++ +K K + + P +E Sbjct: 406 WISMNADRIVAEVNTITGSIGVFGVLFNIQEIANQNGITWDVVKIGKFADLNTTSRPKTE 465 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++Q +VDS Y F++ V+ +RN+ +K ++ GR+W+GA A+K+GL+D +GG Sbjct: 466 ---DELVLIQKMVDSIYERFIKNVATARNLAPEKVEEIAQGRVWSGANAQKLGLVDEIGG 522 Query: 230 QE 231 E Sbjct: 523 IE 524 >gi|119945670|ref|YP_943350.1| signal peptide peptidase SppA, 67K type [Psychromonas ingrahamii 37] gi|119864274|gb|ABM03751.1| signal peptide peptidase SppA, 67K type [Psychromonas ingrahamii 37] Length = 617 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 104/179 (58%), Gaps = 2/179 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 + +E D+ A+++ + SPGGSA+A E I + I +K K V+ + +AAS GY Sbjct: 355 QLLETALNDNQIKAVVIRIDSPGGSAFASEKIRQHILALKKADKKVVVSMASVAASGGYW 414 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I+A T+L GSIG+ Y L+ G+ + ++ + + SP +NP+ Sbjct: 415 IASAADYIIATPTTLTGSIGIFGMYASADKALNNFGIFNDGIGTTEL-SSFSPTRALNPE 473 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 +++Q +++ Y F+ +V++ RN+ + ++ GR+WTG +AK +GLID +G ++ Sbjct: 474 LAEIIQLGIENGYQQFLEVVAQGRNMTVAEVDKIAQGRVWTGVDAKSLGLIDELGNLQD 532 >gi|282899429|ref|ZP_06307396.1| Peptidase S49, protease IV [Cylindrospermopsis raciborskii CS-505] gi|281195693|gb|EFA70623.1| Peptidase S49, protease IV [Cylindrospermopsis raciborskii CS-505] Length = 607 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 106/191 (55%), Gaps = 4/191 (2%) Query: 43 IRGQIEDSQELIER----IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + G+ E SQ +R + +I +D ++++ ++SPGGSA A E I R IQ K KP Sbjct: 327 VDGEGESSQIGGDRYAKVLRKIRQDQDIKSVVLRINSPGGSATASEIIEREIQLTKQVKP 386 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 VI + ++AAS GY I+ S+ I A +L GSIGV + + G++ +VK+S Sbjct: 387 VIVSMGDVAASGGYWIASNSDHIFAEPGTLTGSIGVFGVLLNGQKLANNNGITWDTVKTS 446 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + +P+ + + Q V+ Y+ F+ V + R +P K ++ GR+W+GA A Sbjct: 447 EFADSQTVSRPKSPQELAIYQRSVNRIYNMFINKVVQGRKLPETKVGEIAQGRVWSGATA 506 Query: 219 KKVGLIDVVGG 229 K++GL+D +GG Sbjct: 507 KQIGLVDEIGG 517 >gi|88811815|ref|ZP_01127068.1| protease IV [Nitrococcus mobilis Nb-231] gi|88790699|gb|EAR21813.1| protease IV [Nitrococcus mobilis Nb-231] Length = 614 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 10/206 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSA 80 +D V I + G I D + + ++I RD ALI+ ++SPGGSA Sbjct: 313 QADDQPGKVGLITMEGPIADGESRPGIVGGDTIAQQIRDARRDHGIAALILRVNSPGGSA 372 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A E + R + + KPV+ + +AAS GY + +N I A ++L GSIG+ P Sbjct: 373 TASEVVRREVAATRQAGKPVVVSMSAVAASGGYWAAMNANQIWAQASTLTGSIGIFGLLP 432 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V+ L+KLG+ V + + ++P+ +++Q V++ Y F+ V+++R + Sbjct: 433 NVQTTLEKLGIHPDGVGTHALTGALRADRPLSPEGARLVQLVIEQGYQRFIHRVAQARGM 492 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ GR+W+G +AK++GL+D Sbjct: 493 SVEAVDRIAQGRVWSGRDAKRLGLVD 518 >gi|32034999|ref|ZP_00135077.1| COG0616: Periplasmic serine proteases (ClpP class) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208734|ref|YP_001053959.1| protease 4 [Actinobacillus pleuropneumoniae L20] gi|126097526|gb|ABN74354.1| protease 4 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 618 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLQKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEINEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|307257321|ref|ZP_07539091.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864171|gb|EFM96084.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 618 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLQKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEISEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|302340483|ref|YP_003805689.1| signal peptide peptidase SppA, 36K type [Spirochaeta smaragdinae DSM 11293] gi|301637668|gb|ADK83095.1| signal peptide peptidase SppA, 36K type [Spirochaeta smaragdinae DSM 11293] Length = 791 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 135/279 (48%), Gaps = 23/279 (8%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG 77 +T+ ++ + + H + P G+ + + I DDS A+++ ++S G Sbjct: 502 LTIAIINLTGNIHSGEGVP--------GESVGADTTVRSITLAREDDSIDAIVLRINSGG 553 Query: 78 GSAYAGEAIFRAIQKV---KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 G A ++I RA+ + +N KPV+ + MAAS Y I+ +N++ A ++ GSIGV Sbjct: 554 GGLLASDSIARAVSRTVSGENAKPVVVSMGSMAASGAYYIAARANVVFAYPETMTGSIGV 613 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + P + L++ +++++VK SP SP+ + + + ++ ++ S Y FV V+ Sbjct: 614 VAITPDISRLLEEHKIAVETVKQSPEADFGSPYRPLLAEEREKIKAMIASGYDHFVENVA 673 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + R++ + ++ GR+W+G+ A++ GL+D +GG + + L Q ++ D+ Sbjct: 674 DGRDMKRENVERIAQGRVWSGSAAQEKGLVDEIGGMDAAVKRAAELSGRQGAIELADYTI 733 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P+ +P T GL +VW P Sbjct: 734 PERILRLPF------------LPPSLVTAYHGLGSVWLP 760 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 21/251 (8%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---QELIERIERISRDDSATALIVSLSSPG 77 T+V + + V + P V R R +DS +E I + ++ D +I P Sbjct: 256 TIVRYRFGGPVRE-VPSVVRFGRRLLGDDSITLREHIRSLNELADDPLVDGIIFVNEHPA 314 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS--CASNIIVAAETSLVGSIGVL 135 S + ++ + + + + A + YL++ C + I + E S V GV Sbjct: 315 SSLSVARELLVPLKHFREKGKKVMFYFDTADTDDYLLAAACGAEIYLHPEGS-VDLKGVS 373 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN---PKAVQMMQDVVDSSYHWFVRL 192 Y FLD G+ ++ +S P K+ F+E P+ ++ V D +L Sbjct: 374 VTRSYFATFLDTYGIKFENFRSHPYKSGFDTFTEGGMREPEREELTVLVADME-RAVAQL 432 Query: 193 VSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-----YALGVDQS 245 + E R + D +L+ G + A GLID + ++E+ ++ Y L +S Sbjct: 433 LQEGRGDRLAGDAGKILAGGPYLRASRALDAGLIDKLLYRDEIEDAMDVVETYELPA-KS 491 Query: 246 IRKIKDWNPPK 256 +R +DWN P+ Sbjct: 492 VR--RDWNDPR 500 >gi|28199904|ref|NP_780218.1| protease IV [Xylella fastidiosa Temecula1] gi|182682655|ref|YP_001830815.1| signal peptide peptidase SppA, 67K type [Xylella fastidiosa M23] gi|28058025|gb|AAO29867.1| protease IV [Xylella fastidiosa Temecula1] gi|182632765|gb|ACB93541.1| signal peptide peptidase SppA, 67K type [Xylella fastidiosa M23] gi|307578935|gb|ADN62904.1| signal peptide peptidase SppA, 67K type [Xylella fastidiosa subsp. fastidiosa GB514] Length = 633 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 104/179 (58%), Gaps = 5/179 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFR---AIQKVKNRKPVITEVHEMAASAGYL 113 + ++ +D+ A+++ ++SPGG +A E I R A++KV KPV+ + +MAAS GY Sbjct: 364 LRKVRDEDAVKAVVLRVNSPGGEVFASEQIRREVVALRKVG--KPVVVSMGDMAASGGYW 421 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS ++ I A +++ GSIG+ P + LDK+GV V ++ ++P+ Sbjct: 422 ISMDADRIYADPSTISGSIGIFGLVPNITRTLDKVGVHTDGVGTTRFAGALDITRALDPQ 481 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q+ Q+V+D Y F V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 482 VGQIFQNVIDKGYADFTTKVAQARHRSVKEIDSIARGRVWSGAQAKERGLVDELGGVRE 540 >gi|283955437|ref|ZP_06372935.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 414] gi|283793064|gb|EFC31835.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 414] Length = 298 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 121/240 (50%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + + +K I T + L+ + + S + N ++ RI ++G+I DS ++E+I Sbjct: 11 LGYGIKFINTYFKTFVLLLIVIWILMPSVNSSSNLANLERIDLKGEIFDSSAVLEKIINA 70 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D+S ++ + SPGG+ + AI+ +KN+KPV+ AS YL +N Sbjct: 71 KNDNSIKGVLFVIDSPGGAFAPSMELALAIKDLKNKKPVLVYASGTMASGSYLAGVGANK 130 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S +GSIGV+ Q + +KLG+ +++++ K+ + + +Q Sbjct: 131 ILANPASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWSEDERNFLQG 190 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++D SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 191 LIDQSYDLFTGFVAKERTLDLNKKNQWANARVFLAAKAKELGLIDGLSNYENAKKELEKL 250 >gi|288553729|ref|YP_003425664.1| proteinase IV [Bacillus pseudofirmus OF4] gi|288544889|gb|ADC48772.1| proteinase IV [Bacillus pseudofirmus OF4] Length = 331 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 2/180 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAA 108 Q + +IE ++D S +I+ +++PGG I I +V+ KPV + MAA Sbjct: 85 QAFLSQIEHAAKDSSVQGVIIRVNTPGGGVVESAEIHEKIVEVQEEYNKPVYISMGSMAA 144 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ ++ IVA+ ++ GS+GV+ + + + G+ ++KS K S Sbjct: 145 SGGYYIAAPADKIVASPQTITGSLGVIMESINIAELAENYGIKFNTIKSGEYKDIMSATR 204 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E+ ++Q ++D SY FVR++SE RN+ + L+DGRI+TG +A ++ L+D +G Sbjct: 205 EMTEGDRAILQSLIDESYDEFVRIISEGRNMSESEVRQLADGRIYTGNQALEIDLVDELG 264 >gi|110638854|ref|YP_679063.1| protease IV; signal peptide peptidase [Cytophaga hutchinsonii ATCC 33406] gi|110281535|gb|ABG59721.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Cytophaga hutchinsonii ATCC 33406] Length = 583 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 36 PHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+A + G+I+ S+ + R+ D + A+++ ++SPGGSA A + I Sbjct: 301 PHIAVLFANGEIQSGKGDNETIGSETFCTDLRRLREDKNVKAIVLRVNSPGGSALASDLI 360 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL- 145 +R I + KPVI + +AAS GY I+ A + IVA+ ++ GSIGV + L Sbjct: 361 WREIMLAREVKPVIASMGNVAASGGYYIAMACDTIVASPATITGSIGVFGLLMNTEDLLN 420 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLG+S K+ S V ++Q+ V++ Y F+R +E R+ + Sbjct: 421 NKLGISTDREKTGLYSDLGSLTRPVTDAERMIIQNEVNAIYATFIRKAAEGRHTSVETIE 480 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V + GR+W G +AK+ LIDV GG + Sbjct: 481 VHASGRVWAGKDAKENNLIDVFGGMND 507 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 3/189 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 EL E I+ + +D +++ + + + + K I EM AG Sbjct: 80 ELREAIQEAAVNDKIKGIVIEIKFANTGIATWKELRDELTAFKKSGKFIIAYGEMYTEAG 139 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EPSPFSE 169 Y ++ ++ I E+ ++ G+ Y K L K+GV + + K+ EP Sbjct: 140 YYLASVADEIYLPESGMLEFNGIGVNMLYFKNLLSKIGVKTEVFRVGKYKSAIEPLVNDH 199 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVVG 228 ++ + + + ++S Y + ++ SRNIP +SD + A +AKK GL+ V Sbjct: 200 MSDEDREQVHLYINSLYSVMLNDIASSRNIPLASLKNISDSMLVRNAHDAKKYGLVTNVA 259 Query: 229 GQEEVWQSL 237 +E+ SL Sbjct: 260 YYDEMLSSL 268 >gi|218245954|ref|YP_002371325.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8801] gi|257059002|ref|YP_003136890.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8802] gi|218166432|gb|ACK65169.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8801] gi|256589168|gb|ACV00055.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8802] Length = 598 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 9/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAYAGE 84 +S +A + + G I D ++++ +I +D++ A+++ ++SPGGSA A + Sbjct: 308 SSQKIAVVYLEGAIVDGLGTLQQVGGSRFANLLRQIRQDETIKAVVIRINSPGGSATASD 367 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I R IQ + KPVI + +AAS GY ++ I A ++ GSIGV + + Sbjct: 368 IILREIQLTQAEKPVIISMGNVAASGGYWVATGGQHIFAQANTVTGSIGVFGLFLNINEI 427 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + G+S +VK++ + P+ + + Q V+ Y F+ V++SR + K Sbjct: 428 ANNNGLSWDTVKTANFGDLGTATRPKTPQELAIYQGFVNQVYDLFLERVAKSRQLSKTKV 487 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GRIW+G +AK +GL+D +GG Sbjct: 488 NEIAQGRIWSGEDAKTIGLVDSIGG 512 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 21/246 (8%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSP 76 +V+ F S+ V+D P + + + S +++++ IE+ ++DD A+ + S+ Sbjct: 48 SVLVFDLSTQVQDTEPPLTLSDVFSDEDQSVLTLRQVLQGIEKATKDDRIQAIFLDGSTA 107 Query: 77 -GGSAYAGEAIFR-AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GGS Y + R A+ + + I + Y +S ++ ++ + G+ Sbjct: 108 SGGSGYGTFSEIREALAQFREAGKKIIVYDVTLSEQEYYLSALADTVILNPMGQMELKGL 167 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRL 192 + + DK G+ +++V+ K PF+ +++P+ Q +Q ++D + F+ Sbjct: 168 AIEPLFWSGTFDKYGIGVQTVRVGSFKGAIEPFTRKDLSPENRQQLQALLDDLWSNFLVT 227 Query: 193 VSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V ++R + P + ++ I T +A +VGL+D VG Q DQ+I K+K+ Sbjct: 228 VGKNREVSPQILQRLANNQGILTAQQALEVGLVDEVGYQ------------DQAIAKLKE 275 Query: 252 WNPPKN 257 N Sbjct: 276 LTGTTN 281 >gi|307246184|ref|ZP_07528266.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255165|ref|ZP_07536983.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259602|ref|ZP_07541327.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853119|gb|EFM85342.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862038|gb|EFM94014.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866538|gb|EFM98401.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 618 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q ++S Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIESG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVIEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEISEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGAYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|145588579|ref|YP_001155176.1| peptidase S49 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046985|gb|ABP33612.1| peptidase S49 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 315 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGS----AYAGEAIF 87 H A + + G+I S ++ + ++ + +I+ ++SPGGS + I Sbjct: 65 HTAMVTLDGEISSSSMANAMDINSALTAAFENEHSAGVILRINSPGGSPVQAGMMNDEIH 124 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 R ++K+ KP V ++ AS GY ++ AS+ I+ + SLVGSIGV+ + +DK Sbjct: 125 R-LRKLHPNKPFYVVVEDICASGGYYVAVASDQILVDKASLVGSIGVIMEGFGFTGLMDK 183 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LGV+ + + + K PFS+ PK V+M++ ++D + F+ +V E R +T L Sbjct: 184 LGVTRRMITAGSNKGMLDPFSKEEPKQVEMVKTMIDEIHQQFIAVVKEGRGARLKETPDL 243 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 GRIW G +A K+GL+D G + V + ++ Sbjct: 244 FSGRIWNGEQAVKLGLVDGYGTVDSVARDIF 274 >gi|295096153|emb|CBK85243.1| signal peptide peptidase SppA, 67K type [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 618 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 17/232 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYA 82 +D+ +A + G I D +E +I D A+++ ++SPGGS A Sbjct: 322 DDSGDSIAVVFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVSA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V Sbjct: 382 SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGMINTV 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD LGV V +SP+ A+ S + P+ +MMQ ++S Y F+ LV++SR Sbjct: 442 ENSLDYLGVHTDGVSTSPL-ADVSVTKSLPPEVSEMMQLSIESGYKRFITLVADSRKKTP 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 D+ ++ G +WTG +AK GL+D +G ++ + L K+K W+ Sbjct: 501 DQIDQIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELA------KLKQWH 546 >gi|154148512|ref|YP_001406767.1| signal peptide peptidase SppA, 36K type [Campylobacter hominis ATCC BAA-381] gi|153804521|gb|ABS51528.1| signal peptide peptidase SppA, 36K type [Campylobacter hominis ATCC BAA-381] Length = 291 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 119/214 (55%), Gaps = 1/214 (0%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSL 73 M+ L+ + +++F+ S E ++A I + I D+ +++E+I S +++ A++ ++ Sbjct: 25 MIFLLLVYLIFFTGQSD-EIEQANLAEIRLNDAIMDANDVLEKIYASSDNENIKAVLFNI 83 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG+ I +AI+++ +KPVI AS YL + I+A E S +GSIG Sbjct: 84 DSPGGALSPSVEISKAIKELNEKKPVIVYASGTMASGSYLSGVWARKILANEGSFIGSIG 143 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ Q ++ +K+G+S ++VK+ K + N + +Q++VD SY +FV V Sbjct: 144 VIMQGANIENLANKIGISEQTVKAGEYKEAGTFMRAWNENERESLQNLVDKSYSFFVNEV 203 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +R++ D ++ R++ +A K+GL+D + Sbjct: 204 ANARHLNIDNNETWANARVFLADDALKLGLVDEI 237 >gi|71275280|ref|ZP_00651567.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Dixon] gi|71900134|ref|ZP_00682275.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] gi|170731283|ref|YP_001776716.1| protease IV [Xylella fastidiosa M12] gi|71164089|gb|EAO13804.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Dixon] gi|71730083|gb|EAO32173.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] gi|167966076|gb|ACA13086.1| protease IV [Xylella fastidiosa M12] Length = 633 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 6/178 (3%) Query: 59 RISRD-DSATALIVSLSSPGGSAYAGEAIFR---AIQKVKNRKPVITEVHEMAASAGYLI 114 R +RD D+ A+++ ++SPGG +A E I R A++KV KPV+ + +MAAS GY I Sbjct: 365 RKARDEDAVKAVVLRVNSPGGEVFASEQIRREVVALRKVG--KPVVVSMGDMAASGGYWI 422 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S ++ I A +++ GSIG+ P + LDK+GV V ++ ++P+ Sbjct: 423 SMDADRIYADPSTISGSIGIFGLVPNITRTLDKVGVHTDGVGTTRFAGALDITRALDPQV 482 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q+ Q+V+D Y F V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 483 GQIFQNVIDKGYADFTTKVAQARHRSVKEIDSIARGRVWSGAQAKERGLVDELGGVRE 540 >gi|301156103|emb|CBW15574.1| protease IV (signal peptide peptidase) [Haemophilus parainfluenzae T3T1] Length = 620 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 19/264 (7%) Query: 38 VARIAIRGQIEDSQ--------ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 VA + + G I D + + I R+ R + D+ A+++ ++SPGGSA+A E I + Sbjct: 329 VAVVNVEGTIIDGESNEESAGGDTIARLLRQAHDNEKVKAVVLRVNSPGGSAFASEIIRQ 388 Query: 89 AIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + + K KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ +P + + K Sbjct: 389 ETENLQKAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFALFPTFENTIKK 448 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +G+S V ++ + AE S S +N + Q +++ Y F+ +VS R + DK + Sbjct: 449 MGMSTDGVATTDL-AETSALSPLNKNTQDIYQLGIENGYDRFLEVVSRGRQLSKDKVDKI 507 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + G++W G +A K L+D +G + + + AL V+Q+ K D + W D N Sbjct: 508 AQGQVWLGQDAHKNALVDELGDIDVAIEKVGAL-VNQNPDKYMDSFSVQ--WLVDEDN-- 562 Query: 268 ISSLLEDTIPLMKQTKVQGLWAVW 291 S L +KQ K Q L W Sbjct: 563 --SFLAQLDRKLKQ-KGQALLTNW 583 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 5/158 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 ++++ I D+ L+++L+ GG + E + +AIQ K + KPVI S Sbjct: 95 DVVQSILSAKDDERIRGLVLNLNDFEGGDLPSLEYVGKAIQSFKESEKPVIAYADNYTQS 154 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 +L S A I + VG G+ ++ Y K L+KL ++ + K+ PF Sbjct: 155 QYFLASFADEIYLNP-IGQVGIQGLRYENLYFKSMLEKLEITPHIFRVGTYKSAVEPFLR 213 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +++P+A MQ + + +++ + +R+I + L Sbjct: 214 DDMSPEARANMQKWLGGMWQNYMQTLMVNRHITANDVL 251 >gi|282899709|ref|ZP_06307673.1| Peptidase S49, SppA [Cylindrospermopsis raciborskii CS-505] gi|281195588|gb|EFA70521.1| Peptidase S49, SppA [Cylindrospermopsis raciborskii CS-505] Length = 273 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + ++E I+ + + AL++ + SPGG+ + I+ A++++ Sbjct: 12 QIARIEITGAIASGTRKRVLEAIKTVE-EKKFPALLLRIDSPGGTVGDSQEIYSALKELG 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K Sbjct: 71 KKTKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ ++Q+++D SY F++ V+++R +P + +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTQPEENILQELIDVSYQQFIQTVAQARALPIETVKTFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A +G++D +G +E+ Sbjct: 191 GEQALNLGVVDRLGTEED 208 >gi|85707607|ref|ZP_01038673.1| periplasmic serine protease [Erythrobacter sp. NAP1] gi|85689141|gb|EAQ29144.1| periplasmic serine protease [Erythrobacter sp. NAP1] Length = 629 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 99/170 (58%), Gaps = 1/170 (0%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIV 122 D L+V ++SPGGS A E I RA+Q+ +++ PV +AAS GY ++ +S+ I Sbjct: 349 DDIKGLVVRVNSPGGSVLASEEIRRAVQRFRDKDIPVAVSFANVAASGGYWVATSSDRIF 408 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ GSIGV P + ++GV+ + +++P+ +P + ++P+ ++Q V Sbjct: 409 AQPETITGSIGVFAVIPTFEDAAAEIGVNAEGFRTTPLSGQPDLIAGLSPEVDAILQAGV 468 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 +Y F+ V+E+R + ++ ++ GR+W G A+++GL+D GG ++ Sbjct: 469 SDTYSDFLTRVAEARGLTVEQVDTMAQGRVWDGGTARQLGLVDQFGGLQD 518 >gi|312109911|ref|YP_003988227.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y4.1MC1] gi|311215012|gb|ADP73616.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y4.1MC1] Length = 336 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 11/229 (4%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF--RAIQKVKNRKPVITEVHEM 106 + + + IE+ DD+ A+I+ + SPGG I K + +KP+ + M Sbjct: 87 NHRAFLRMIEQAKNDDTVKAIILRVDSPGGGVVESAEIHDQLLKLKKETKKPIYVSMGTM 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS A++ I A+ +L GS+GV+ Q + K GV + ++KS P K +P Sbjct: 147 AASGGYYISTAADKIFASPETLTGSLGVIIQSFNYEGLAKKYGVELVTIKSGPYKDIMNP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ + +++Q ++ +SY FV+++SE R++P + ++DGRI+ G +AK++ LID Sbjct: 207 ARKMTEEEKEILQRLIHNSYEGFVKVISEGRHLPESEVRKIADGRIYDGRQAKQLKLIDE 266 Query: 227 VGGQEEVWQSL---YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 G E+ ++ Y L Q ++ D++ F L + +S ++ Sbjct: 267 FGYLEDTIAAIKKDYDLANAQVVKYTNDFS------FGSLFKMELSRMI 309 >gi|119493252|ref|ZP_01624092.1| protease IV [Lyngbya sp. PCC 8106] gi|119452725|gb|EAW33903.1| protease IV [Lyngbya sp. PCC 8106] Length = 607 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 101/173 (58%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L +++ ++ D A+++ ++SPGGSA A E I R ++ ++ +KPVI + AAS GY Sbjct: 345 LAKKLRKLRMDKEVKAVVLRVNSPGGSATASEIIGREVELLQAQKPVIVSMGNFAASGGY 404 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS A++ I A ++ GSIGV V+ ++ GV+ V++ + P Sbjct: 405 WISMAASQIFAESNTITGSIGVFGVLFNVQDIANENGVTWDVVQTGRYANINTVSRPKTP 464 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + +Q VVD+ Y F+ VSESR++P K ++ GR+W+G +A+K+GL+D Sbjct: 465 EELARIQKVVDAIYERFLTKVSESRDLPKSKVAEIAQGRVWSGIQAEKIGLVD 517 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 21/237 (8%) Query: 21 TVVYFSWSSHVEDNSPH--VARIAIRGQIEDS------QELIERIERISRDDSATALIV- 71 +V+ F S ++ D P + + + EDS + ++E +E S+DD L + Sbjct: 50 SVLVFDLSLNITDADPEYDTSELFQKALAEDSFNQIKLRTILEGLEEASQDDRIVGLYLK 109 Query: 72 SLSSPGGSAYAGEAIFR-AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 S+P + A R A++K + KP+I + YL S A+ I+V + + Sbjct: 110 GTSNPTSTGLANSTEVRQALEKFRESGKPIIAYDLDWTEPEYYLASVANTIVV----NPL 165 Query: 130 GSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDS 184 GS+ G+ + ++ +K G+ ++ + K+ PF +++ + + Q ++D Sbjct: 166 GSVEMNGLSSEIMFLAGAFEKFGIGVQVTRVGKYKSAVEPFLLKQMSSENREQTQKLLDD 225 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + ++ VS SR + + ++DG+ I EA K L+D V +EV L L Sbjct: 226 IWGKYITTVSPSRQLNASQLQQIADGQGILMAPEAVKSKLVDKVAHFDEVIVDLKKL 282 >gi|311279913|ref|YP_003942144.1| signal peptide peptidase SppA, 67K type [Enterobacter cloacae SCF1] gi|308749108|gb|ADO48860.1| signal peptide peptidase SppA, 67K type [Enterobacter cloacae SCF1] Length = 617 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D VA I G I D QE +I D A+++ ++SPGGS A Sbjct: 322 DQGSAVAVIFANGAIIDGQETPGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVSAS 381 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 382 EVIRAELAAAREANKPVVVSMGGMAASGGYWISTPANYIVANASTLTGSIGIFGVINTVE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L LGV V +SP+ A+ S + P+ QMMQ ++S Y F+ LV++SR+ + Sbjct: 442 NSLSNLGVHTDGVSTSPL-ADVSITKSLPPEVQQMMQLSIESGYKRFITLVAQSRHSTPE 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 501 QVDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKLKQWH 545 >gi|156934334|ref|YP_001438250.1| protease 4 [Cronobacter sakazakii ATCC BAA-894] gi|156532588|gb|ABU77414.1| hypothetical protein ESA_02165 [Cronobacter sakazakii ATCC BAA-894] Length = 616 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D +E +I D A+++ ++SPGGS A E I + Sbjct: 326 IAVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASETIRQ 385 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + K KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ LD Sbjct: 386 ELAAAKEAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTVENSLDA 445 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV V +SP+ AE S + P+ ++MQ +++ Y F+ LV++SRN + + Sbjct: 446 IGVHTDGVATSPL-AEVSVTKALPPEVQKLMQLTIENGYQRFIGLVAQSRNKTPQQIDQI 504 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + G +WTG +AK+ GL+D +G Sbjct: 505 AQGHVWTGEDAKQNGLVDSLG 525 >gi|260913982|ref|ZP_05920456.1| signal peptide peptidase SppA [Pasteurella dagmatis ATCC 43325] gi|260632069|gb|EEX50246.1| signal peptide peptidase SppA [Pasteurella dagmatis ATCC 43325] Length = 626 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAGEAIFR 88 +A + + G I D + + I R+ R ++DD S A+++ ++SPGGSA+A E I + Sbjct: 329 IAVVNVEGAIIDGESFEDDVGGDTIARLLRQAKDDESVKAVVLRVNSPGGSAFASEIIRQ 388 Query: 89 AIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + + K KPVI + MAAS GY IS ++ IVA + ++ GSIG+ P + + K Sbjct: 389 EVTHLQKAGKPVIVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPSFEKTIKK 448 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 GVS V +SP+ +E S FS ++ + + Q ++ Y F+ LV+E R + + Sbjct: 449 AGVSADGVSTSPL-SELSLFSPLSNELNDVFQLEIEHGYDKFISLVAEGRALDKADVEKV 507 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + G+IW G EA K L+D +G Sbjct: 508 AQGKIWLGQEALKHNLVDQIG 528 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 22/213 (10%) Query: 26 SWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS-PGGSAYAG 83 SW + +++ N H+ R QI + +++ I +D+ L+ L+ GG A Sbjct: 76 SWENALKEFNDQHIPR-----QIS-TFDVVYAITNAEKDERIKGLVFDLNFFEGGDLPAL 129 Query: 84 EAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I RAI K ++KPVI + YL++ ++ I V +G+ Q Y K Sbjct: 130 EYIGRAISDFKRSKKPVIV-FADNYNQKQYLLASYADQIYLNPVGKVSILGMKQQNLYFK 188 Query: 143 PFLDKLGVSIKSVKSSPMKA--EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI- 199 L+ L V+ + K+ EP +++ A + M+ ++ + +V +V+++R I Sbjct: 189 SMLNMLDVTTNVFRVGTYKSAVEPLLRDDMSEAAKEDMKSWLNQMWTNYVSIVADNRQIE 248 Query: 200 -----PYDKTLVLSDGRIWTG---AEAKKVGLI 224 P KT V + R+ G A K+ GLI Sbjct: 249 PRAVLPDAKTYV-EELRVLKGDSSAYTKQRGLI 280 >gi|56752187|ref|YP_172888.1| protease IV [Synechococcus elongatus PCC 6301] gi|81300725|ref|YP_400933.1| signal peptide peptidase A [Synechococcus elongatus PCC 7942] gi|56687146|dbj|BAD80368.1| protease IV [Synechococcus elongatus PCC 6301] gi|81169606|gb|ABB57946.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Synechococcus elongatus PCC 7942] Length = 270 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 116/200 (58%), Gaps = 5/200 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI + G I Q L+ ++ ++ + AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEVSGAIAGGTRQRLLRSLKTVA-ERGYPALLLRIDSPGGTVGDSQEIYEALKRLR 70 Query: 95 --NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ VI ++AS G I ++ IV+ ++ GSIGV+ + ++ LD++GVS Sbjct: 71 SQHQTKVIASFGNISASGGVYIGMGADKIVSNPGTITGSIGVILRGNNLERLLDRVGVSF 130 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ +++Q+++D SY FV+ V+++R + + +DGRI Sbjct: 131 KVIKSGPYKDILSFDRELTDNEKEILQNLIDISYQQFVQTVADARQLTVETVKSFADGRI 190 Query: 213 WTGAEAKKVGLIDVVGGQEE 232 +TG +A +GLID +G +E+ Sbjct: 191 FTGEQALSLGLIDRLGTEED 210 >gi|322832766|ref|YP_004212793.1| signal peptide peptidase SppA, 67K type [Rahnella sp. Y9602] gi|321167967|gb|ADW73666.1| signal peptide peptidase SppA, 67K type [Rahnella sp. Y9602] Length = 617 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 11/207 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 ++N P +A I G I D +E ++I D A+++ ++SPGGS A Sbjct: 321 DNNDPQIAVIFATGAINDGEEQPGAVGGDTTAQQIRDARLDPKVKAIVLRVNSPGGSVSA 380 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + K KPV+ + MAAS GY IS +N I+A+ ++L GSIG+ Sbjct: 381 SEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIIASPSTLTGSIGIFGVINTY 440 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD GV V +SP+ A+ + + P+ QMMQ +++ Y F+ LV++SR+ Sbjct: 441 QNTLDYAGVHTDGVATSPL-ADIASTKALPPEFSQMMQLNIENGYKTFLGLVADSRHKTP 499 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ ++ G +W G++AK GL+D +G Sbjct: 500 EQIDQIAQGHVWIGSDAKANGLVDELG 526 >gi|296272293|ref|YP_003654924.1| signal peptide peptidase SppA, 36K type [Arcobacter nitrofigilis DSM 7299] gi|296096468|gb|ADG92418.1| signal peptide peptidase SppA, 36K type [Arcobacter nitrofigilis DSM 7299] Length = 295 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 132/248 (53%), Gaps = 16/248 (6%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYF-------SWSSHVEDNSPHVARIAIRGQIEDSQEL 53 ++F+ K KT +V LT++YF S S VEDN+ ++ +I + G I + ++ Sbjct: 16 LDFITKYFKT------IVFLTIIYFIVSSNTTSSISSVEDNA-NLQKIELAGPILNVDKV 68 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 ++ I + + + +++ ++SPGGS + AI++++ KPV+ + AS Y Sbjct: 69 LDEINKAKANRNIKGVLLVVNSPGGSVAPSVELSYAIKELRAVKPVVAYASGVMASGSYY 128 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NP 172 S +N I+A S+VGSIGV+FQ V+ + K+GVS +++K+ K E FS N Sbjct: 129 ASIWANKIIANPGSMVGSIGVIFQGANVEELMKKIGVSTQTIKAGKYK-EAGTFSRAWNE 187 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ V+ +Y F+ V+++R + ++ I+T +AKKVGLID VG Sbjct: 188 SEKEELESVISDTYDMFITDVAKARRLKKQDNEKYANAHIFTARQAKKVGLIDEVGTISI 247 Query: 233 VWQSLYAL 240 LY + Sbjct: 248 AKNELYKI 255 >gi|289434866|ref|YP_003464738.1| peptidase, U7 family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171110|emb|CBH27652.1| peptidase, U7 family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 337 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 31 VEDNSP-HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +E P +A +++ G I+D+ E ++++E++ D+S +++ ++S Sbjct: 55 IEKAGPSKIAVLSVDGTIQDTGESTSLLGSTGYNHSFFMDQLEQVRDDESIKGVLLYVNS 114 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I +++ + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 115 PGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 174 Query: 134 VLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ Q Y Y + KLG++ ++KS K S + ++MQ ++D SY+ FV++ Sbjct: 175 VIMQGYDY-SELMKKLGITDNTIKSGAHKDIMSATRPMTEDEKKIMQSMIDDSYNEFVQV 233 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++DGRI+ G +AK+ GLID G QE+ +L Sbjct: 234 VASGRGMSEEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALAAL 278 >gi|319953646|ref|YP_004164913.1| signal peptide peptidase sppa, 67k type [Cellulophaga algicola DSM 14237] gi|319422306|gb|ADV49415.1| signal peptide peptidase SppA, 67K type [Cellulophaga algicola DSM 14237] Length = 586 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 97/167 (58%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DD+ A+++ ++SPGGSA + I+R I+ K KPV+ + ++AAS GY I+ ++ I Sbjct: 336 EDDAVKAIVLRVNSPGGSALTSDIIWREIELTKAIKPVVVSMGDVAASGGYYIAVGADKI 395 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A T++ GSIGV P +G++ + V ++ + S F ++ M+Q+ Sbjct: 396 FAEPTTITGSIGVFGTIPNATELAKNIGINAEQVGTNKNSVDYSLFEPMSDGFRNMVQEG 455 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+S+Y F+ V++ R I + ++ GR+W+G +AK +GL+D +G Sbjct: 456 VESTYTTFLERVAQGRKITVAEADSMAQGRVWSGLDAKNLGLVDELG 502 >gi|304314958|ref|YP_003850105.1| protease [Methanothermobacter marburgensis str. Marburg] gi|302588417|gb|ADL58792.1| predicted protease [Methanothermobacter marburgensis str. Marburg] Length = 287 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/260 (27%), Positives = 138/260 (53%), Gaps = 23/260 (8%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DS---------QELIERIERISRD 63 ++ +++++ + S S + + VA I + G I DS ++ IE + D Sbjct: 11 LIVVLSISGLVMSISGFIGEAEGTVAIIPVHGAIAYDSAGFSDAVSPDDIKNLIEEANSD 70 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 S A+++ ++SPGG+ A E + AI+K + KPV++ + + S YL + AS+ IVA Sbjct: 71 PSVKAIVLDINSPGGTPVASEELMDAIKK--SEKPVVSWISDSGTSGAYLAASASDRIVA 128 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + ++ VGSIGV+ + ++G++ ++K+ K + + + + QM+Q +V+ Sbjct: 129 SPSAWVGSIGVILDLTDLSEMYRQMGINKYAIKAGEYKDMGADYRMITDEERQMLQSMVN 188 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y +F+R V+ +RN+ L++GRI+TG +A K L+D GG++ YA+ V Sbjct: 189 EEYDYFIRTVAANRNLSVSYVRGLAEGRIFTGRQALKNRLVDYTGGRD------YAVDVA 242 Query: 244 QSIRKIKDWN-----PPKNY 258 + +K+++ PP + Sbjct: 243 AKLAGLKNYDTVTLEPPGGF 262 >gi|91793256|ref|YP_562907.1| signal peptide peptidase SppA, 67K type [Shewanella denitrificans OS217] gi|91715258|gb|ABE55184.1| signal peptide peptidase SppA, 67K type [Shewanella denitrificans OS217] Length = 613 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + ++ DD AL++ + SPGGSA+A E I + + ++ KPV+ + MAAS GY Sbjct: 353 ELLRKVRFDDKIKALVLRVDSPGGSAFASEQIRQEVLAIQAAGKPVVVSMGSMAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + + L ++G++ V +S A S +N Sbjct: 413 ISASADYIYATPTTLTGSIGIFGMFATFEEALAQIGINSDGVATSDW-AGLSVARPLNSN 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ YH F+ LV+ RN+ ++ ++ GR+WTG +A ++GL+D +G Sbjct: 472 VEAVIQRHIERGYHEFISLVATERNMTLEQVDAIAQGRVWTGKKALELGLVDEIG 526 >gi|313633075|gb|EFR99981.1| putative signal peptide peptidase SppA [Listeria seeligeri FSL N1-067] Length = 337 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 31 VEDNSP-HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +E P +A +++ G I+D+ E ++++E++ D+S +++ ++S Sbjct: 55 IEKAGPSKIAVLSVDGTIQDTGESTSLLGSTGYNHSFFMDQLEQVRDDESIKGVLLYVNS 114 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I +++ + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 115 PGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 174 Query: 134 VLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ Q Y Y + KLG++ ++KS K S + ++MQ ++D SY+ FV++ Sbjct: 175 VIMQGYDY-SELMKKLGITDNTIKSGAHKDIMSATRPMTEDEKKIMQSMIDDSYNEFVQV 233 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++DGRI+ G +AK+ GLID G QE+ +L Sbjct: 234 VASGRGMSEEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALAAL 278 >gi|313637993|gb|EFS03284.1| putative signal peptide peptidase SppA [Listeria seeligeri FSL S4-171] Length = 337 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 121/225 (53%), Gaps = 19/225 (8%) Query: 31 VEDNSP-HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +E P +A +++ G I+D+ E ++++E++ D+S +++ ++S Sbjct: 55 IEKAGPSKIAVLSVDGTIQDTGESTSLLGSTGYNHSFFMDQLEQVRDDESIKGVLLYVNS 114 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I +++ + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 115 PGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 174 Query: 134 VLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ Q Y Y + KLG++ ++KS K S + ++MQ ++D SY+ FV++ Sbjct: 175 VIMQGYDY-SELMKKLGITDNTIKSGAHKDIMSATRPMTEDEKKIMQSMIDDSYNEFVQV 233 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++DGRI+ G +AK+ GLID G QE+ +L Sbjct: 234 VASGRGMSEEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALAAL 278 >gi|284102428|ref|ZP_06386046.1| signal peptide peptidase SppA (protease IV) [Candidatus Poribacteria sp. WGA-A3] gi|283830320|gb|EFC34553.1| signal peptide peptidase SppA (protease IV) [Candidatus Poribacteria sp. WGA-A3] Length = 322 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 104/177 (58%), Gaps = 3/177 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E + + + D++ A+++ +S+PGG+ A + ++ IQ++K + PVI + ++ S GY Sbjct: 75 EELTKAADDEAVKAIVLRISTPGGTVTASDILYHEIQEMKKTRKVPVIASIMDLGTSGGY 134 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ A++ +VA +S+ GS+GV+ ++K+GV +V S P K SPF + Sbjct: 135 YVAMAADRVVAHPSSVTGSLGVIMLTLNASGLMEKIGVRADAVMSGPHKDMGSPFRTMTD 194 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + Q V+DS Y F+R++ + R ++ + L+DGRI++ +AK GLID +G Sbjct: 195 QDRAIFQGVIDSLYARFLRVIEQGRPDLKPETIRQLADGRIYSATQAKDHGLIDGIG 251 >gi|300771388|ref|ZP_07081264.1| signal peptide peptidase SppA [Sphingobacterium spiritivorum ATCC 33861] gi|300762058|gb|EFK58878.1| signal peptide peptidase SppA [Sphingobacterium spiritivorum ATCC 33861] Length = 589 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 9/210 (4%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 GQI S ++ + ++ DD A++ ++SPGGSA A + I+R + K KP+I + Sbjct: 325 GQIA-SDKVSRELRKLREDDRVKAVVFRVNSPGGSALASDVIWREVVLTKKVKPIIVSMG 383 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSP-MKA 162 + AAS GY IS A++ I A + ++ GSIGV P K L DKLG+ VK+ Sbjct: 384 DYAASGGYYISAAADSIFAEKNTITGSIGVFGLIPNFKGLLNDKLGIHFDGVKTGTYADL 443 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 SP + + ++Q V+ +Y F + V+E R + + GR+WTG +A ++G Sbjct: 444 MSSPDRPLTAEERNIIQLEVNKTYGSFTKKVAEGRKLSVANVDSIGQGRVWTGEQAVEIG 503 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 L+D +G + +S + K+KD+ Sbjct: 504 LVDRIGSIGDAIRSAAKMA------KLKDY 527 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 7/187 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE-MAASA 110 +++ERI+ D + +++S + I A+ K K I E A Sbjct: 86 DILERIQSAKSDSKIKGIYLNISGANTGFATLQEIRDALIDFKASKKFIVSYSEGYTQKA 145 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--- 167 YL S A I + E SL G+ ++K LDKLGV ++ VK K+ PF Sbjct: 146 YYLASVADKIYLNPEGSL-DFRGLSTSIMFMKDALDKLGVDMQVVKVGTYKSAVEPFMLN 204 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDV 226 P +Q ++ + S Y F+ VS SR +P D ++D AE A ++ L+D Sbjct: 205 GMSQPNRLQ-VESYLGSLYTTFLDNVSASRKVPVDSLRAIADRYAVRDAEDAVRLKLVDA 263 Query: 227 VGGQEEV 233 V ++E+ Sbjct: 264 VLYKDEL 270 >gi|165976686|ref|YP_001652279.1| protease IV, signal peptide peptidase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876787|gb|ABY69835.1| protease IV, signal peptide peptidase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 618 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEINEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|126663145|ref|ZP_01734143.1| putative protease IV [Flavobacteria bacterium BAL38] gi|126624803|gb|EAZ95493.1| putative protease IV [Flavobacteria bacterium BAL38] Length = 588 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 122/242 (50%), Gaps = 11/242 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPH--VARIAIRGQIEDSQ---------ELIERIERISRDDS 65 +V++T +S VED S +A I +G+I + + ++ DD Sbjct: 281 IVSITDYAQKAASTVEDYSKEDIIAVIYAQGEIAGGEGDVNIIGEGSINRSLKEAREDDD 340 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++SPGGSA E I+R I+ K KPV+ + AAS GY I+ ++ I A Sbjct: 341 VKAIVLRVNSPGGSALTSELIWREIEITKKVKPVVVSMGNYAASGGYYIAANADRIFAEP 400 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGV P + +G++ + VK+ + S F ++ + + ++ Sbjct: 401 NTITGSIGVFGMLPNMSQLSKNIGINAEQVKTHENASGYSIFEPIDENFKGFVLESIEKI 460 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F++ V++ R + ++ +++ GR+WTG +A K+GL+D +GG + + LG S Sbjct: 461 YATFLKRVADGRKMTTEQVDLIAQGRVWTGIDAHKLGLVDEIGGLDAAIKYAAKLGKTNS 520 Query: 246 IR 247 R Sbjct: 521 YR 522 >gi|307261744|ref|ZP_07543410.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868562|gb|EFN00373.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 618 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEINEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++ +R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAHNRKIPAEQVLLDS 253 >gi|212710743|ref|ZP_03318871.1| hypothetical protein PROVALCAL_01811 [Providencia alcalifaciens DSM 30120] gi|212686440|gb|EEB45968.1| hypothetical protein PROVALCAL_01811 [Providencia alcalifaciens DSM 30120] Length = 617 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 139/266 (52%), Gaps = 17/266 (6%) Query: 25 FSWSSHVEDNS---PHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVS 72 + +S+ + D S ++A I ++G I D + L +I +D+ A+++ Sbjct: 314 YDYSTQIADTSNSEGNIAVIVVQGAIMDGPQTPGIAGGETLAAQIRDARLNDNIKAIVLR 373 Query: 73 LSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGS A + I + + +KPV+ + MAAS GY IS ++ I+A+ ++L GS Sbjct: 374 VNSPGGSVSASDLIRNELAAARAAKKPVVVSMGGMAASGGYWISTPADYIIASPSTLTGS 433 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG+ + L+ +GV V +SP+ A S ++P+ MMQ +++ Y F+ Sbjct: 434 IGIFGVINTFENSLESIGVYTDGVSTSPL-AGVSVTKGISPQFADMMQITIENGYQTFIG 492 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 LV++SR+ ++ ++ GR+W G +A K+GL+D +G ++ L +S+ D Sbjct: 493 LVAQSRHKTPEEIDKIAQGRVWIGKDALKIGLVDQLGDFDDAVAKAAELAQVKSVE--LD 550 Query: 252 WNPPKNYWFCDLKNLSISSLLEDTIP 277 W P+ F D L +++ ++ +P Sbjct: 551 WMQPE-LSFMDQLILEVTNNVQVMMP 575 >gi|307250517|ref|ZP_07532462.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857459|gb|EFM89570.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 618 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 139/271 (51%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVIEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEISEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGAYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|284007469|emb|CBA72932.1| protease IV (signal peptide peptidase) [Arsenophonus nasoniae] Length = 626 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +D ++A I +G I D S+ + +I + + A+++ ++SPGGS A Sbjct: 333 DDQPSNIAVIIAQGAIIDGPQEPGMVGSETTVAQIRKARLNPDIKAIVLRVNSPGGSVTA 392 Query: 83 GEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 EAI + ++ KP++ + MAAS GY IS +N I A+ T+L GSIG+ Sbjct: 393 SEAIRNELVAARDANKPIVVSMGGMAASGGYWISTPANYIFASPTTLTGSIGIFGVINTF 452 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD +GV V ++P+ A+ S +N + MMQ ++++ YH F++ V+++R+ Sbjct: 453 EKSLDTIGVYTDGVSTTPL-ADISATKGINKQFSDMMQIIIENGYHTFLKYVAQARHKTP 511 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ GR+W G++A + GLID +G Sbjct: 512 AEIDKIAQGRVWVGSDALQNGLIDKLG 538 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 19/173 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGS-----AYAGEAIFRAIQKVKNRKPVITEVHEM 106 +++ I R + DD T +++ L + GS Y G+A+ Q KP+ + Sbjct: 99 DIVNIIRRATYDDKITGIVLQLDNLIGSDQPSLQYIGKALTEFKQA---GKPIYAVGNGY 155 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S YL S A+NI ++ + + VG G Y K LD L V+ + K+ P Sbjct: 156 NQSQYYLASFANNIYMSQQGN-VGIYGFSTNKLYYKTLLDNLKVNSHIFRIGTYKSAVEP 214 Query: 167 FSEVNPKAVQMMQDVV--DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 F N A D V S + ++ ++++R + G I+ GA+ Sbjct: 215 FIRDNMSAEAREADKVWIGSLWQHYLSTIAQNRQT--------TAGNIFPGAD 259 >gi|118462440|ref|YP_883579.1| signal peptide peptidase SppA, 67K type [Mycobacterium avium 104] gi|254776880|ref|ZP_05218396.1| signal peptide peptidase SppA, 67K type [Mycobacterium avium subsp. avium ATCC 25291] gi|118163727|gb|ABK64624.1| signal peptide peptidase SppA, 67K type [Mycobacterium avium 104] Length = 595 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD+ +A+++ ++SPGGS A E ++R +++ + R KPV+ + +AAS GY +S A++ I Sbjct: 345 DDAVSAIVLRVNSPGGSVTASETLWREVKRARERGKPVVASMGAVAASGGYYVSVAADAI 404 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++ GSIGV+ ++ L +LGV +V+++ S + P+ + Sbjct: 405 VANPATITGSIGVITGKLVIRDLLGRLGVGSDTVRTNANADAWSIDAPFTPEQRAHREAE 464 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D Y FV V+E RN+ D ++ GR+WTGA+A + GL+D +GG Sbjct: 465 ADLVYTDFVSRVAEGRNLTTDAVERVARGRVWTGADAHERGLVDELGG 512 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 10/213 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ ++ I R + D LI + + A + + AI KP + + Sbjct: 69 RDTVDAIHRAAEDPRVAGLIARVQLAPSPSAAVQELREAIVAFTAAKPSLAWAETYPGTL 128 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV-----KSSPMKAEPS 165 Y ++ A I VG IG +++ LDK G+ + V KS+ + Sbjct: 129 SYYLASAFGEIWMQPGGSVGLIGFASNATFLRDALDKAGIEAQFVARGEYKSAVNRFTEH 188 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F+E + +AV M D V W + V+ESR + D L+D +A GL+D Sbjct: 189 GFTEAHREAVTRMLDSVQEQV-W--QAVAESRKLDTDALDALADRAPLLRQDALDSGLVD 245 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +G +++ + + L Q + D PP+ Y Sbjct: 246 RIGFRDQAYDRIAELVGVQDVS--PDTEPPRLY 276 >gi|113461051|ref|YP_719118.1| protease IV family protein [Haemophilus somnus 129PT] gi|112823094|gb|ABI25183.1| protease IV family [Haemophilus somnus 129PT] Length = 621 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 128/229 (55%), Gaps = 15/229 (6%) Query: 36 PHVARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAGEAI 86 P +A + + G I D + + I ++ R + D+ + A+++ ++SPGGSA+A E I Sbjct: 324 PAIAVVNVEGAIVDGESDEQNVGGDSIAQLLREANDEPNIKAVVLRVNSPGGSAFASEII 383 Query: 87 FRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + + K+ KPV+ + +AAS GY IS ++ IVA ++ GSIG+ +P + + Sbjct: 384 RQEVDNLQKSGKPVVVSMGAIAASGGYWISSTADYIVADPNTITGSIGIFAMFPTFEKSM 443 Query: 146 DKLGVSIKSVKSSP--MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K+GV+ V ++ MK+ SP S+++ + +Q+ ++ Y F+ +VS RN+ + Sbjct: 444 QKIGVNADGVATTDVVMKSHFSPLSKISSEIIQLE---IEHGYDQFLDVVSRGRNLSKTQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 ++ G++W+G +A L+D +G ++ + L + +S +IKD+ Sbjct: 501 VDKIAQGQVWSGFDAYTYKLVDQLGSFDDAVEKARELVIQKSSEEIKDF 549 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 13/185 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAY-AGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++ I+ +D TAL++ L+ G A I +AIQ K ++KPVI S Sbjct: 95 DVVNAIQAAKKDPKITALVLDLNYFDGKDIPALTYIGKAIQAFKASKKPVIAYADNYTQS 154 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 YL++ +++I+ V G++ + Y K +KL ++ + K+ PF Sbjct: 155 Q-YLLASYADVILLNPQGEVAIEGMVAENLYFKSLFNKLEITPHIFRVGTYKSAVEPFML 213 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-----DKTLVLSDGRIWTGAE---AK 219 +++ K+ + ++ + + ++V+E+R+IP D LS+ + G + AK Sbjct: 214 DKMSEKSRENTSRWLNQLWKSYQQIVAENRDIPLAQVLPDSKTYLSELKALNGNQTEYAK 273 Query: 220 KVGLI 224 K GLI Sbjct: 274 KRGLI 278 >gi|318040377|ref|ZP_07972333.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CB0101] Length = 270 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 110/196 (56%), Gaps = 2/196 (1%) Query: 38 VARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARIAI G I ++E + + R AL++ + SPGG+ + I AIQ+++ + Sbjct: 13 LARIAIEGAIASGTRERVLKALREVEQREFPALLLRIDSPGGTVGDSQEIHAAIQRLRQK 72 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+ ++AS G + A+ IVA S+ GSIGV+ + + L+++GV ++V Sbjct: 73 GCRVVASFGNISASGGVYVGVAAEKIVANAGSITGSIGVILRGNNLSRLLERIGVQFETV 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS K SP + Q++Q+++DSSY FV V+E R++ +DGR+++G Sbjct: 133 KSGLYKDILSPDRALTAGERQLLQELIDSSYGQFVTAVAEGRDLEEGTVRSFADGRVFSG 192 Query: 216 AEAKKVGLIDVVGGQE 231 A+A +GL+D +G +E Sbjct: 193 AQALVLGLVDQLGDEE 208 >gi|154174848|ref|YP_001408779.1| signal peptide peptidase SppA, 36K type [Campylobacter curvus 525.92] gi|112802242|gb|EAT99586.1| signal peptide peptidase SppA, 36K type [Campylobacter curvus 525.92] Length = 287 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 116/212 (54%), Gaps = 1/212 (0%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P++A+I I+G + D+ E++ ++E + D + +++ + SPGG+ I ++++K Sbjct: 44 PNLAQIDIKGALFDTDEILNKLEELRNDQNIKGVLLYIDSPGGALSPSVEIATQVKRLKE 103 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 K V+ AS Y ++ I+A S +GSIGV+ Q P + K+GVS + V Sbjct: 104 SKKVLAYAGGSMASGSYYAGVNADKILANPGSFIGSIGVIMQAPNIAELAHKIGVSEQVV 163 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ +K + + + + +Q++VD +Y F + V+++RN+ DK ++ R++ Sbjct: 164 KAGELKEAGTFTRQWSKEERASLQNLVDGAYELFTKDVAQARNLSLDKKDEWANARVFLA 223 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSI 246 +A K+GLID V G + L A+ GVD+ + Sbjct: 224 DDALKMGLIDGVCGYFDAKSELEAMSGVDEPV 255 >gi|41410286|ref|NP_963122.1| hypothetical protein MAP4188 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399120|gb|AAS06738.1| SppA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 595 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD+ +A+++ ++SPGGS A E ++R +++ + R KPV+ + +AAS GY +S A++ I Sbjct: 345 DDAVSAIVLRVNSPGGSVTASETLWREVKRARERGKPVVASMGAVAASGGYYVSVAADAI 404 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++ GSIGV+ ++ L +LGV +V+++ S + P+ + Sbjct: 405 VANPATITGSIGVITGKLVIRDLLGRLGVGSDTVRTNANADAWSIDAPFTPEQRAHREAE 464 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D Y FV V+E RN+ D ++ GR+WTGA+A + GL+D +GG Sbjct: 465 ADLVYTDFVSRVAEGRNLTTDAVERVARGRVWTGADAHERGLVDELGG 512 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 10/213 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ ++ I R + D LI + + A + + AI KP + + Sbjct: 69 RDTVDAIHRAAEDPRVAGLIARVQLAPSPSAAVQELREAIVAFTAAKPSLAWAETYPGTL 128 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV-----KSSPMKAEPS 165 Y ++ A I VG IG +++ LDK G+ + V KS+ + Sbjct: 129 SYYLASAFGEIWMQPGGSVGLIGFASNATFLRDALDKAGIEAQFVARGEYKSAVNRFTEH 188 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F+E + +AV M D V W + V+ESR + D L+D +A GL+D Sbjct: 189 GFTEAHREAVTRMLDSVQEQV-W--QAVAESRKLDTDALDALADRAPLLRQDALDSGLVD 245 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +G +++ + + L Q + D PP+ Y Sbjct: 246 RIGFRDQAYDRIAELVGVQDVS--PDTEPPRLY 276 >gi|215444849|ref|ZP_03431601.1| protease IV [Mycobacterium tuberculosis T85] gi|289568669|ref|ZP_06448896.1| protease IV sppA [Mycobacterium tuberculosis T17] gi|289542423|gb|EFD46071.1| protease IV sppA [Mycobacterium tuberculosis T17] Length = 458 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 202 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 261 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 262 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 321 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 322 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 381 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 382 RAKVLAGLDE 391 >gi|254523187|ref|ZP_05135242.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas sp. SKA14] gi|219720778|gb|EED39303.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas sp. SKA14] Length = 663 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 10/207 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDD-SATALIVSLSSPGGSAYAG 83 D+ P VA + G+I RI R +RDD + A+++ + SPGG +A Sbjct: 361 DSRPQVAVVVAEGEISGGDLPAGRIGGESTSALLRAARDDENVKAVVLRVDSPGGEVFAS 420 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + ++ KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 421 EQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGMVPNFS 480 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q V++ Y F V+++R P + Sbjct: 481 RALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQTVINKGYADFTGRVADARKKPVE 540 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GR+W+GA+AK+ GL+D GG Sbjct: 541 AVDEVARGRVWSGAQAKERGLVDAFGG 567 >gi|161503605|ref|YP_001570717.1| protease 4 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864952|gb|ABX21575.1| hypothetical protein SARI_01684 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 618 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + VK KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAVKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ AE S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-AEISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 LV+E+R ++ ++ G +WTG +AK GL+D +G Sbjct: 490 TLVAEARKRTPEQIDKIAQGHVWTGQDAKANGLVDKLG 527 >gi|86608463|ref|YP_477225.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557005|gb|ABD01962.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] Length = 268 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 126/229 (55%), Gaps = 9/229 (3%) Query: 37 HVARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + RI + G I+ ++E + + + ++ A+++ + SPGG+ + I+ A+ +++ Sbjct: 13 QIGRIEVAGAIDGKTRERVLKALKEVEENQIPAVVLRIDSPGGTVADSQEIYNALLRLRE 72 Query: 96 RKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +K ++ +AAS G I+ + IVA ++ GSIGV+ + ++ LDK+G+S K Sbjct: 73 KKGTRIVASFGNIAASGGVYIAMGAEKIVANPGTITGSIGVIIRGNNIERLLDKVGISFK 132 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K S E+ P+ ++Q+++D +Y FV+ V+ +R + + +DGRI+ Sbjct: 133 VIKSGPYKDILSFDRELTPEERNILQELIDITYGQFVQTVAAARKLSLNVVKTFADGRIF 192 Query: 214 TGAEAKKVGLIDVVGGQEE--VWQS-LYALGVDQSIRKIKDWNPPKNYW 259 +G +A +G++D +G +E+ +W + L L D K D P + W Sbjct: 193 SGEQALHLGVVDRLGTEEDARLWAAELAGLPTDA---KFYDLLPRRRGW 238 >gi|242280848|ref|YP_002992977.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] gi|242123742|gb|ACS81438.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] Length = 293 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 117/203 (57%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + ++G I +S ++ + + RDDS +++ ++SPGG+ + ++ A++++ K Sbjct: 47 IGVVNVQGTITNSLPTVKFLRDLRRDDSVKGVLLRVNSPGGTIAPSQELYHAVKRLAEVK 106 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ +AAS GY + + I+A+ S+ GSIGV +Y ++K+GV + S Sbjct: 107 PIVASFGTVAASGGYYAAAPATKIMASSGSITGSIGVKAEYANFHQLMEKIGVKPVIITS 166 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 MKA SPF+E+ P+ + + ++ ++ FV V+ +R + ++ ++DGR TG E Sbjct: 167 GKMKAAGSPFTELTPEQREYLTALIMDMHNQFVDDVASARKLDREQVEKIADGRAITGRE 226 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 AK++GL+D +GG E+ L AL Sbjct: 227 AKELGLVDRIGGFEDSVTVLKAL 249 >gi|289756812|ref|ZP_06516190.1| protease IV SppA [Mycobacterium tuberculosis T85] gi|289712376|gb|EFD76388.1| protease IV SppA [Mycobacterium tuberculosis T85] Length = 466 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 210 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 269 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 270 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 329 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 330 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 389 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 390 RAKVLAGLDE 399 >gi|196231671|ref|ZP_03130528.1| signal peptide peptidase SppA, 36K type [Chthoniobacter flavus Ellin428] gi|196224143|gb|EDY18656.1| signal peptide peptidase SppA, 36K type [Chthoniobacter flavus Ellin428] Length = 345 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 122/236 (51%), Gaps = 16/236 (6%) Query: 37 HVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A I +RG I S+ +L ++E+ + D+ A+++ + SPGG A ++I Sbjct: 68 KIALIYLRGVISSSEPGALGESMVDDLKIQLEQAATDEKVKAVVLYVDSPGGEVTASDSI 127 Query: 87 FRAIQKVK-----NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + A++KV+ +KPV+ + +AAS GY ISCA ++A ET+L GSIGV+ Q Sbjct: 128 YDAVRKVREGGYGKKKPVVVYMGSLAASGGYYISCAGTWLMANETTLTGSIGVIMQSLNY 187 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 K KLG+ + KS K S ++ + +Q +V +Y FV +V++ R + Sbjct: 188 KELFGKLGLQTVTFKSGQFKDMLSGSRDLTQEERDYIQKMVMDTYGKFVGIVAKERKLNE 247 Query: 202 DKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 D+ L+DGR+ +G +A LI+ G E+ + LG + I+ +P K Sbjct: 248 DELRHGLADGRVISGKDALAAKLINATGEVEDAYAKAMELGNARGATVIRYESPFK 303 >gi|282599624|ref|ZP_05971253.2| signal peptide peptidase SppA [Providencia rustigianii DSM 4541] gi|282567989|gb|EFB73524.1| signal peptide peptidase SppA [Providencia rustigianii DSM 4541] Length = 635 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 78/275 (28%), Positives = 142/275 (51%), Gaps = 17/275 (6%) Query: 21 TVVYFSWSSHVEDNS---PHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 ++ + +SS + + S ++A I ++G I D + + +I +D A Sbjct: 328 SISIYDYSSKIAETSNAAGNIAVIVVQGAIMDGPQTPGIAGGETIAAQIRDARLNDDIKA 387 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGGS A + I + K + KPV+ + MAAS GY IS ++ I+A+ ++ Sbjct: 388 IVLRVNSPGGSVSASDLIRNELAAAKASGKPVVVSMGGMAASGGYWISTPADYIIASPST 447 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + L+ +GV V +SP+ A+ S ++P+ MMQ +++ Y Sbjct: 448 LTGSIGIFGVINTFENSLESIGVYTDGVSTSPL-ADISLTKGISPEFADMMQITIENGYE 506 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LV++SRN + ++ GR+WTG +A +GL+D +G ++ L SI Sbjct: 507 TFIGLVAKSRNKTPAEIDKIAQGRVWTGQDALNIGLVDKLGDFDDAVNKAAELAKVDSIE 566 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 DW P+ F D L +S+ ++ +P + Q+ Sbjct: 567 --LDWMQPE-LSFMDQLILELSNNVQVMMPDVLQS 598 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 15/132 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGS-----AYAGEAI--FRAIQKVKNRKPVITEVH 104 ++++ I + DD T +++ L + G+ AY G+AI F+A + KPV Sbjct: 117 DIVDTIRTAADDDRITGMVLRLDNLAGADQPSIAYIGKAIEQFKA-----SGKPVYAVGD 171 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA-- 162 + S YL S A ++ +A + VG G Y K L+KL VS + K+ Sbjct: 172 SYSQSQYYLASFADDVFIAPHGN-VGVYGFSTNTLYYKSLLEKLKVSSHVFRVGTYKSAV 230 Query: 163 EPSPFSEVNPKA 174 EP ++P+A Sbjct: 231 EPMMRDNMSPEA 242 >gi|218705264|ref|YP_002412783.1| protease 4 [Escherichia coli UMN026] gi|218432361|emb|CAR13251.1| protease IV (signal peptide peptidase) [Escherichia coli UMN026] Length = 618 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + ++ KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARSAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|325578196|ref|ZP_08148331.1| signal peptide peptidase SppA [Haemophilus parainfluenzae ATCC 33392] gi|325159932|gb|EGC72061.1| signal peptide peptidase SppA [Haemophilus parainfluenzae ATCC 33392] Length = 620 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA + + G I D + +++ + + ++ A+++ ++SPGGSA+A E I + Sbjct: 329 VAVVNVEGTIIDGESDEESAGGDTIVKLLRQAYDNEKVKAVVLRVNSPGGSAFASEIIRQ 388 Query: 89 AIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + + K+ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ +P + + K Sbjct: 389 ETENLQKSGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFALFPTFENTIKK 448 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +G+S V ++ + AE S S + + Q +++ Y F+ +VS R + DK + Sbjct: 449 MGMSTDGVATTDL-AETSALSPLGKNTQDIYQLSIENGYDRFLEVVSRGRQLSKDKVDKI 507 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + G++W G +A+K GL+D +G Sbjct: 508 AQGQVWLGQDAQKNGLVDELG 528 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 5/158 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 ++++ I D+ L+++L+ GG + E + +AIQ K + KPVI S Sbjct: 95 DVVQSILSAKDDERIRGLVLNLNDFEGGDLPSLEYVGKAIQSFKESEKPVIAYADNYTQS 154 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 +L S A I + VG G+ ++ Y K L+KL ++ + K+ PF Sbjct: 155 QYFLASFADEIYLNP-IGQVGIQGLRYENLYFKSMLEKLEITPHIFRVGTYKSAVEPFLR 213 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +++P+A MQ + + +++ + +R+I + L Sbjct: 214 DDMSPEARANMQKWLGGMWQNYMQTLMVNRHITANDVL 251 >gi|146311337|ref|YP_001176411.1| protease 4 [Enterobacter sp. 638] gi|145318213|gb|ABP60360.1| signal peptide peptidase SppA, 67K type [Enterobacter sp. 638] Length = 618 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 17/226 (7%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA + G I D +E +I D A+++ ++SPGGS A E I Sbjct: 328 VAVVFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVSASEVIRA 387 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ LD Sbjct: 388 ELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTVENSLDY 447 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LGV V +SP+ A+ S + P+ QMMQ +++ Y F+ LV+ESR ++ + Sbjct: 448 LGVHTDGVATSPL-ADVSVTKSLPPEVSQMMQLTIENGYKRFITLVAESRKSTPEQIDKI 506 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 507 AQGHVWTGQDAKNNGLVDSLGDFDD------AVAKAAELAKLKQWH 546 >gi|293405264|ref|ZP_06649256.1| protease 4 [Escherichia coli FVEC1412] gi|298380907|ref|ZP_06990506.1| protease IV [Escherichia coli FVEC1302] gi|300898997|ref|ZP_07117286.1| signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|291427472|gb|EFF00499.1| protease 4 [Escherichia coli FVEC1412] gi|298278349|gb|EFI19863.1| protease IV [Escherichia coli FVEC1302] gi|300357394|gb|EFJ73264.1| signal peptide peptidase SppA [Escherichia coli MS 198-1] Length = 666 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + ++ KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARSAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|308231619|ref|ZP_07663897.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu001] gi|308369979|ref|ZP_07666834.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu002] gi|308216725|gb|EFO76124.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu001] gi|308325733|gb|EFP14584.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu002] Length = 289 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 33 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 92 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 93 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 152 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG Sbjct: 153 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGG 206 >gi|323488441|ref|ZP_08093688.1| signal peptide peptidase SppA, 36K type [Planococcus donghaensis MPA1U2] gi|323397948|gb|EGA90747.1| signal peptide peptidase SppA, 36K type [Planococcus donghaensis MPA1U2] Length = 337 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 130/266 (48%), Gaps = 26/266 (9%) Query: 33 DNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGG 78 D + VA + + G I+D+ + +E++E I D S A++++++SPGG Sbjct: 57 DFNNRVAVLNVDGVIQDTGDAASFFGTTGYNHSFFMEQLENIKEDASVKAVVLAVNSPGG 116 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 I+ I +++ KP + +AAS GY I+ + I E +L GSIGV+ Sbjct: 117 GVVESAEIYDKITEIQEETGKPFYVSMGAIAASGGYYIAAPAEKIFVNEETLTGSIGVIM 176 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q ++ GV ++KS P K SP ++ ++Q+++D SY FV ++ E Sbjct: 177 QSVNYGELAERYGVDFVTIKSGPYKDIMSPTRDMTEDERALLQEMLDDSYESFVDVIEEG 236 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKD-- 251 R++ ++ ++DGRI G +A +V L D G +E+V + + + LG + + D Sbjct: 237 RSMTEEEVKAVADGRIMNGRQAVEVNLADDFGFEEDVIEQIKTDFDLGNAEVFQYGNDQG 296 Query: 252 WNP-----PKNYWFCDLKNLSISSLL 272 W +++ DL+ IS LL Sbjct: 297 WGSLLSMKVNSFFGNDLETQMISKLL 322 >gi|219556574|ref|ZP_03535650.1| protease IV [Mycobacterium tuberculosis T17] Length = 463 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 207 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 266 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 267 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 326 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 327 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 386 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 387 RAKVLAGLDE 396 >gi|300723417|ref|YP_003712720.1| protease IV, a signal peptide peptidase [Xenorhabdus nematophila ATCC 19061] gi|297629937|emb|CBJ90557.1| protease IV, a signal peptide peptidase [Xenorhabdus nematophila ATCC 19061] Length = 629 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 118/217 (54%), Gaps = 13/217 (5%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI--------FRAIQKVKNRKPVI 100 DS L+E++ + + A+++ ++SPGGS A E I + KN KPV+ Sbjct: 352 DSDALVEQLREARHNPNIKAIVLRVNSPGGSIGASELIRAELVAARYDKENNGKNAKPVV 411 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + +AAS GY IS ++ I+A +L GSIGV + L+ +GV+ + ++P+ Sbjct: 412 VSMGGLAASGGYWISTPADYIIADPNTLTGSIGVFGVLQTFEKTLNYIGVNADGISTTPL 471 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 A+ S +N ++Q ++SSY+ F+ LV+++RN P ++ ++ GR+W G +AKK Sbjct: 472 -ADISATKGLNQAVSDVIQLSIESSYNKFIALVAKARNKPVNEIDNMAQGRVWDGLDAKK 530 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIK-DWNPPK 256 GL+D +G ++ + L +I+ + DW P+ Sbjct: 531 QGLVDQLGDFDDAVKKAAELA---NIKHVSLDWMQPE 564 >gi|297618458|ref|YP_003703617.1| signal peptide peptidase SppA, 36K type [Syntrophothermus lipocalidus DSM 12680] gi|297146295|gb|ADI03052.1| signal peptide peptidase SppA, 36K type [Syntrophothermus lipocalidus DSM 12680] Length = 295 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 123/226 (54%), Gaps = 5/226 (2%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 G ++E++E + + D A+++ + SPGGSA A + I R I+++K + KP++ + Sbjct: 58 GGATQTEEIMEALREAGKRDDIKAVLIRIDSPGGSAVAAQEIAREIERLKKKGKPLVASM 117 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY ++ + + I A + GSIGV+ + ++ ++G+ + +KS K Sbjct: 118 GDVAASGGYWVAASCDEIFANPATTTGSIGVITEQVNLEELFSRMGIETEVIKSGSYKDM 177 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKV 221 S +++P+ ++++++VD Y F+ V + R + D+ ++DGR+ TG +AK++ Sbjct: 178 GSITRKLSPEERKLLEELVDDVYQQFLLQVEKGRRGKMSPDEIRTIADGRVMTGNKAKQI 237 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP--PKNYWFCDLKN 265 GL+D +G + + L ++ + NP P + F L N Sbjct: 238 GLVDHLGNYYDALERTKELANLSGEPQVIELNPQDPFSKVFSQLLN 283 >gi|124003560|ref|ZP_01688409.1| signal peptide peptidase SppA, 67K type [Microscilla marina ATCC 23134] gi|123991129|gb|EAY30581.1| signal peptide peptidase SppA, 67K type [Microscilla marina ATCC 23134] Length = 573 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 16/215 (7%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPG 77 W + ++ +A I G+I ++++ + R + S A+++ ++SPG Sbjct: 278 WEKQQKKSNHRIAVIVADGEIRSGNGRDGIVGAAKIVKALRRARKSKSVKAIVLRVNSPG 337 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA A + ++R I + KPVI + ++AAS GY I+ A + IVA ++ GSIG+ Sbjct: 338 GSALASDIMWREIHLTRKVKPVIASMSDVAASGGYYIAMACDTIVAQPNTITGSIGIFSI 397 Query: 138 YPYVKPFL-DKLGVSIKSVKSSPMKA--EPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 Y + F +KLG++ V + A +PS PF+E + Q++Q ++ Y F Sbjct: 398 YFNLAAFQKNKLGITNDYVNTGKFSALGDPSYPFTEADR---QILQRSIERGYESFTSKA 454 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ R + + ++ GR+W G EAK+ GL+DV+G Sbjct: 455 AKDRGMSLAELKSVASGRVWAGNEAKQNGLVDVLG 489 >gi|320354585|ref|YP_004195924.1| signal peptide peptidase SppA, 67K type [Desulfobulbus propionicus DSM 2032] gi|320123087|gb|ADW18633.1| signal peptide peptidase SppA, 67K type [Desulfobulbus propionicus DSM 2032] Length = 621 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI-QKVKNRKPVITEV 103 GQI + +LI+RI + +D A+++ +++ GGSA A E I + + Q K K V+ + Sbjct: 346 GQI-GADDLIKRIRKARQDQRIKAIVLRITTGGGSALASELIRQELAQAKKEGKIVVVSM 404 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 MAAS GY ++ +++IVAA T+L GSIG+ P V+ L LG+ V ++ + Sbjct: 405 GAMAASGGYWLAADADLIVAAPTTLTGSIGIFGAVPTVEKTLANLGIHGDGVGTTDIAHF 464 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 +P + ++P+ + V Y F+ +V++ R + ++ +++GR+W G A K+GL Sbjct: 465 GNPATTMSPEEETALHMEVMQGYRRFIDIVAQGRKMRPEQVEKIAEGRVWDGTTALKLGL 524 Query: 224 IDVVGGQEE 232 +D +G EE Sbjct: 525 VDKLGNLEE 533 >gi|163801948|ref|ZP_02195845.1| cytoplasmic asparaginase I [Vibrio sp. AND4] gi|159174456|gb|EDP59260.1| cytoplasmic asparaginase I [Vibrio sp. AND4] Length = 616 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 15/226 (6%) Query: 24 YFSWSSHVEDN-SPHVARIAI---RGQIEDSQE--------LIERIERISR-DDSATALI 70 Y+ + + + N +P V IA+ G I D Q+ + + R +R DD A++ Sbjct: 309 YYDYLATMAPNLTPAVDDIAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + + SPGGSA+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T+L Sbjct: 369 LRVDSPGGSAFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + +KLG+S V +SP + + ++ A Q Q ++ Y F Sbjct: 429 GSIGIFSVITTFEKGFNKLGISTDGVGTSPFSGD-GITTGLSDGASQAFQLGIEHGYKRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + LV +R + ++ ++ GR+WTG +A GL+D +G ++ Q Sbjct: 488 ISLVGSNREMSLEEVDKVAQGRVWTGQDAMSFGLVDQMGDFDDAVQ 533 >gi|85373032|ref|YP_457094.1| periplasmic serine protease [Erythrobacter litoralis HTCC2594] gi|84786115|gb|ABC62297.1| periplasmic serine protease [Erythrobacter litoralis HTCC2594] Length = 626 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 11/223 (4%) Query: 22 VVYFSW-SSHVEDNSPH-VARIAIRGQIEDSQ--------ELIERIERISRDDSATALIV 71 Y +W S + D S + + + G+I D + + I + + D LIV Sbjct: 296 TAYDAWLSDNARDTSGSAIGVVTVAGEIVDGEAGPGTAGGDRIAELLDAALSDDLAGLIV 355 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + SPGGS A EAI A+ + K + P+ + +AAS GY +S ++ I A ++ G Sbjct: 356 RVDSPGGSVLASEAIRDAVLRHKAKGIPIAVSMANVAASGGYWVSTPADRIFAEPETITG 415 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ P + + GV+ V ++ + +P + P+ ++Q ++ Y F+ Sbjct: 416 SIGIFAVIPTFENLAAEYGVNADGVATTSLSGQPDLIAGFTPEVDAILQSSIEDGYRDFL 475 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 VSE+R +P ++ + GR+W G A+++GL+D GG EE Sbjct: 476 TRVSEARKLPMERVDAIGQGRVWDGGTARQIGLVDQYGGLEEA 518 >gi|296125359|ref|YP_003632611.1| signal peptide peptidase SppA, 36K type [Brachyspira murdochii DSM 12563] gi|296017175|gb|ADG70412.1| signal peptide peptidase SppA, 36K type [Brachyspira murdochii DSM 12563] Length = 324 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 5/196 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMA 107 ++EL+E E +D A+++ + SPGG+ + E + +Q +K + KP++ MA Sbjct: 65 TEELMEDFEYYLKDPKVKAIVLQVDSPGGALTSCEEALKYLQDLKAKYPKPIVASFRSMA 124 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY +S ++ I A E++L GSIGV+ Q+ V +DK GV + ++KS K SPF Sbjct: 125 ASGGYYMSMIADKIYANESTLTGSIGVISQFFNVSGLMDKYGVKMYTIKSGRNKDSLSPF 184 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLID 225 E + QD+ F +V ++R I ++ + DGR+++G A +VGLID Sbjct: 185 REPREDELAYWQDMTYEFVAQFTNVVEQARGDKIKGNREEIF-DGRVFSGKRALEVGLID 243 Query: 226 VVGGQEEVWQSLYALG 241 +G ++ + LG Sbjct: 244 AIGTLQDAIKDAAKLG 259 >gi|15840132|ref|NP_335169.1| protease IV [Mycobacterium tuberculosis CDC1551] gi|308370480|ref|ZP_07421698.2| protease IV sppA [Mycobacterium tuberculosis SUMu003] gi|308373552|ref|ZP_07432816.2| protease IV sppA [Mycobacterium tuberculosis SUMu005] gi|308375233|ref|ZP_07443216.2| protease IV sppA [Mycobacterium tuberculosis SUMu007] gi|308376479|ref|ZP_07439007.2| protease IV sppA [Mycobacterium tuberculosis SUMu008] gi|308377499|ref|ZP_07479407.2| protease IV sppA [Mycobacterium tuberculosis SUMu009] gi|308378702|ref|ZP_07483598.2| protease IV sppA [Mycobacterium tuberculosis SUMu010] gi|308379848|ref|ZP_07487837.2| protease IV sppA [Mycobacterium tuberculosis SUMu011] gi|13880283|gb|AAK44983.1| protease IV [Mycobacterium tuberculosis CDC1551] gi|308331869|gb|EFP20720.1| protease IV sppA [Mycobacterium tuberculosis SUMu003] gi|308337113|gb|EFP25964.1| protease IV sppA [Mycobacterium tuberculosis SUMu005] gi|308347025|gb|EFP35876.1| protease IV sppA [Mycobacterium tuberculosis SUMu007] gi|308350909|gb|EFP39760.1| protease IV sppA [Mycobacterium tuberculosis SUMu008] gi|308355599|gb|EFP44450.1| protease IV sppA [Mycobacterium tuberculosis SUMu009] gi|308359558|gb|EFP48409.1| protease IV sppA [Mycobacterium tuberculosis SUMu010] gi|308363462|gb|EFP52313.1| protease IV sppA [Mycobacterium tuberculosis SUMu011] Length = 539 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 283 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 342 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 343 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 402 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG Sbjct: 403 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGG 456 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 4 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 63 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 64 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 123 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M +DS + V++SRNI D L+D +A GLID Sbjct: 124 GFTDAHREAVTRM---LDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 180 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 181 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 220 >gi|215429565|ref|ZP_03427484.1| protease IV sppA [Mycobacterium tuberculosis EAS054] gi|289752771|ref|ZP_06512149.1| protease IV SppA [Mycobacterium tuberculosis EAS054] gi|289693358|gb|EFD60787.1| protease IV SppA [Mycobacterium tuberculosis EAS054] Length = 622 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 366 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 425 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 426 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 485 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 486 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 545 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 546 RAKVLAGLDE 555 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 87 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 146 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 147 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 206 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M +DS + V++SRNI D L+D +A GLID Sbjct: 207 GFTDAHREAVTRM---LDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 263 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 264 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 303 >gi|317051685|ref|YP_004112801.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] gi|316946769|gb|ADU66245.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] Length = 326 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 100/179 (55%), Gaps = 2/179 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAA 108 QE++ ++ RD A+I+++ +PGG+ + ++ I++ + PV+ + MA Sbjct: 75 QEVVAHLDMARRDPLIRAVILTVDTPGGTTVDSDILYHEIERFRLETGTPVVVSLMGMAT 134 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS AS++I A ++ GS+G +F P V ++KLG+ + +S +K SPF Sbjct: 135 SGGYYISLASDLITAHPATITGSVGTIFIRPKVHGLMEKLGLEAQVTRSGSLKDMGSPFR 194 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 P +++Q +VD +F+ LV + R + + ++ RI+T ++A +VGLID V Sbjct: 195 PELPAEQELIQQMVDDVNGFFLELVQQRRRLSAEHMADVASARIYTASQALEVGLIDEV 253 >gi|167968282|ref|ZP_02550559.1| protease IV sppA [Mycobacterium tuberculosis H37Ra] gi|215402507|ref|ZP_03414688.1| protease IV sppA [Mycobacterium tuberculosis 02_1987] gi|215410281|ref|ZP_03419089.1| protease IV sppA [Mycobacterium tuberculosis 94_M4241A] gi|254549685|ref|ZP_05140132.1| protease IV sppA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260199734|ref|ZP_05767225.1| protease IV sppA [Mycobacterium tuberculosis T46] gi|260203895|ref|ZP_05771386.1| protease IV sppA [Mycobacterium tuberculosis K85] gi|294996206|ref|ZP_06801897.1| protease IV sppA [Mycobacterium tuberculosis 210] gi|297633223|ref|ZP_06951003.1| protease IV sppA [Mycobacterium tuberculosis KZN 4207] gi|297730203|ref|ZP_06959321.1| protease IV sppA [Mycobacterium tuberculosis KZN R506] gi|306796479|ref|ZP_07434781.1| protease IV sppA [Mycobacterium tuberculosis SUMu006] gi|313657530|ref|ZP_07814410.1| protease IV sppA [Mycobacterium tuberculosis KZN V2475] gi|308343138|gb|EFP31989.1| protease IV sppA [Mycobacterium tuberculosis SUMu006] gi|323720851|gb|EGB29918.1| protease IV sppA [Mycobacterium tuberculosis CDC1551A] Length = 600 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 344 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 403 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 404 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 463 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 464 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 523 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 524 RAKVLAGLDE 533 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 65 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 125 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 184 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M +DS + V++SRNI D L+D +A GLID Sbjct: 185 GFTDAHREAVTRM---LDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 241 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 242 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 281 >gi|224369572|ref|YP_002603736.1| SppA [Desulfobacterium autotrophicum HRM2] gi|223692289|gb|ACN15572.1| SppA [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 2/222 (0%) Query: 13 VMLSLVTLTVVYFS--WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 + +++V T FS S+ + ++ + I G I S+E+ ++++ D + A++ Sbjct: 25 LTVAIVMGTSAMFSSTLSTPFNTDQGNIGIVEIVGVIASSKEVSQQLKDFREDPAIKAIV 84 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG + I+R I K K K VI + +AAS GY + A++ ++A ++ G Sbjct: 85 LRIDSPGGGVGPSQEIYREIIKTKKIKKVIASLGSVAASGGYYAASATDAVIANPGTITG 144 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ +Y ++ ++K+G++ +KS K SP E+ PK ++Q V D + FV Sbjct: 145 SIGVIMEYANLQKIMEKIGLTPVVIKSGEFKDMGSPVREITPKERAILQGVADEVHQQFV 204 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 R V+ R++ + L+DGRI+TG A + L+D +G E+ Sbjct: 205 RDVASGRSLEQAQVEKLADGRIYTGETALDLHLVDRLGNLED 246 >gi|289749231|ref|ZP_06508609.1| protease IV sppA [Mycobacterium tuberculosis T92] gi|289689818|gb|EFD57247.1| protease IV sppA [Mycobacterium tuberculosis T92] Length = 567 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 311 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 370 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 371 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 430 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG Sbjct: 431 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGG 484 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 32 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 91 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 92 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 151 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M +DS + V++SRNI D L+D +A GLID Sbjct: 152 GFTDAHREAVTRM---LDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 208 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 209 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 248 >gi|254284422|ref|ZP_04959390.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR51-B] gi|219680625|gb|EED36974.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR51-B] Length = 590 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 107/184 (58%), Gaps = 1/184 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S+ ++ER+ R + A+++ +++PGGS +A + I +Q+++ + V+ + +A Sbjct: 325 SETVLERLRRTAELPGLEAVVLRINTPGGSVFAADVIREGVQELRAQGLTVVVSMAALAT 384 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ ++ IVA T+L GSIGV +P + D GVS+ V ++ M Sbjct: 385 SGGYYIAAETDHIVAQPTTLTGSIGVFAAFPTFERLFDYAGVSVDGVGTTAMADAFRADR 444 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + +++ V+ +Y F+ +V+E R + ++ +++G +WTG++A ++GL+D +G Sbjct: 445 PLSEGSASVIRQVIAGTYVDFLHIVAEGRGMNVEQVAPIAEGIVWTGSDALEIGLVDSMG 504 Query: 229 GQEE 232 G EE Sbjct: 505 GLEE 508 >gi|332288260|ref|YP_004419112.1| putative protease [Gallibacterium anatis UMN179] gi|330431156|gb|AEC16215.1| putative protease [Gallibacterium anatis UMN179] Length = 619 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 117/204 (57%), Gaps = 11/204 (5%) Query: 35 SPHVARIAIRGQIEDSQ--------ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEA 85 S ++A + + G I D + + I R+ R + +++A A+++ ++SPGGSA+A E Sbjct: 322 SNNIAVLRVEGTIIDGESDDENVGGDTIARLLRQAAENTAVKAVVLRINSPGGSAFASEV 381 Query: 86 IFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++ ++ KPV+ + MAAS GY I+ ++ I+A + ++ GSIG+ + ++ Sbjct: 382 IREEVEHLQQIGKPVVVSMGGMAASGGYWIASTADYIIADKNTITGSIGIFAAFVTLEKS 441 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ VK+SP+ A SPF+ ++ + ++Q ++ Y F+ LV++ R + + Sbjct: 442 LANLGIHSDGVKTSPL-ASMSPFTALSQEYSDVIQMSIEHGYDQFISLVAKGRKLDKSQV 500 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+W G +A K L+D +G Sbjct: 501 DKIAQGRVWLGEDALKYKLVDELG 524 >gi|156975314|ref|YP_001446221.1| protease [Vibrio harveyi ATCC BAA-1116] gi|156526908|gb|ABU71994.1| hypothetical protein VIBHAR_03044 [Vibrio harveyi ATCC BAA-1116] Length = 616 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQE--------LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIF 87 +A + G I D Q+ + + R +R DD A+++ + SPGGSA+A E I Sbjct: 326 DIAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSPGGSAFASEVIR 385 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + Sbjct: 386 NEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFT 445 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+S V +SP + + ++ A Q Q ++ Y F+ LV +R++ D+ Sbjct: 446 KLGISTDGVGTSPFSGDGIT-TGLSDGASQAFQLGIEHGYKRFISLVGSNRDMSLDEVDK 504 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+WTG +A GL+D +G Sbjct: 505 VAQGRVWTGQDAMSFGLVDQMG 526 >gi|15607864|ref|NP_215238.1| protease IV SppA [Mycobacterium tuberculosis H37Rv] gi|31791910|ref|NP_854403.1| protease IV SppA [Mycobacterium bovis AF2122/97] gi|121636646|ref|YP_976869.1| putative protease IV sppA (endopeptidase IV) [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660499|ref|YP_001282022.1| hypothetical protein MRA_0732 [Mycobacterium tuberculosis H37Ra] gi|148821929|ref|YP_001286683.1| protease IV sppA [Mycobacterium tuberculosis F11] gi|224989118|ref|YP_002643805.1| putative protease IV [Mycobacterium bovis BCG str. Tokyo 172] gi|253797667|ref|YP_003030668.1| protease IV sppA [Mycobacterium tuberculosis KZN 1435] gi|254231044|ref|ZP_04924371.1| protease IV sppA [Mycobacterium tuberculosis C] gi|254363670|ref|ZP_04979716.1| protease IV sppA [Mycobacterium tuberculosis str. Haarlem] gi|289442125|ref|ZP_06431869.1| signal peptide peptidase SppA, 67K type [Mycobacterium tuberculosis T46] gi|289552981|ref|ZP_06442191.1| protease IV sppA [Mycobacterium tuberculosis KZN 605] gi|289573332|ref|ZP_06453559.1| protease IV sppA [Mycobacterium tuberculosis K85] gi|289744448|ref|ZP_06503826.1| protease IV sppA [Mycobacterium tuberculosis 02_1987] gi|298524215|ref|ZP_07011624.1| protease IV [Mycobacterium tuberculosis 94_M4241A] gi|308371742|ref|ZP_07426068.2| protease IV sppA [Mycobacterium tuberculosis SUMu004] gi|1806192|emb|CAB06448.1| POSSIBLE PROTEASE IV SPPA (ENDOPEPTIDASE IV) (SIGNAL PEPTIDE PEPTIDASE) [Mycobacterium tuberculosis H37Rv] gi|31617497|emb|CAD93607.1| POSSIBLE PROTEASE IV SPPA (ENDOPEPTIDASE IV) (SIGNAL PEPTIDE PEPTIDASE) [Mycobacterium bovis AF2122/97] gi|121492293|emb|CAL70760.1| Possible protease IV sppA (endopeptidase IV) [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600103|gb|EAY59113.1| protease IV sppA [Mycobacterium tuberculosis C] gi|134149184|gb|EBA41229.1| protease IV sppA [Mycobacterium tuberculosis str. Haarlem] gi|148504651|gb|ABQ72460.1| putative protease IV [Mycobacterium tuberculosis H37Ra] gi|148720456|gb|ABR05081.1| protease IV sppA [Mycobacterium tuberculosis F11] gi|224772231|dbj|BAH25037.1| putative protease IV [Mycobacterium bovis BCG str. Tokyo 172] gi|253319170|gb|ACT23773.1| protease IV sppA [Mycobacterium tuberculosis KZN 1435] gi|289415044|gb|EFD12284.1| signal peptide peptidase SppA, 67K type [Mycobacterium tuberculosis T46] gi|289437613|gb|EFD20106.1| protease IV sppA [Mycobacterium tuberculosis KZN 605] gi|289537763|gb|EFD42341.1| protease IV sppA [Mycobacterium tuberculosis K85] gi|289684976|gb|EFD52464.1| protease IV sppA [Mycobacterium tuberculosis 02_1987] gi|298494009|gb|EFI29303.1| protease IV [Mycobacterium tuberculosis 94_M4241A] gi|308335656|gb|EFP24507.1| protease IV sppA [Mycobacterium tuberculosis SUMu004] gi|326905054|gb|EGE51987.1| protease IV sppA [Mycobacterium tuberculosis W-148] gi|328457448|gb|AEB02871.1| protease IV sppA [Mycobacterium tuberculosis KZN 4207] Length = 623 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 367 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 426 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 427 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 486 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 487 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 546 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 547 RAKVLAGLDE 556 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 88 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 147 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 148 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 207 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M D + W + V++SRNI D L+D +A GLID Sbjct: 208 GFTDAHREAVTRMLDSLQDQV-W--QAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 264 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 265 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 304 >gi|190150587|ref|YP_001969112.1| protease 4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263931|ref|ZP_07545535.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915718|gb|ACE61970.1| protease 4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870796|gb|EFN02536.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 618 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q + + Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIQNG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEINEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++ +R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAHNRKIPAEQVLLDS 253 >gi|303250651|ref|ZP_07336848.1| protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252900|ref|ZP_07534789.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650639|gb|EFL80798.1| protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859689|gb|EFM91713.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 618 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 21/271 (7%) Query: 21 TVVYFSWSSHVED----NSPH-VARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D + H +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q + + Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIQNG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L V+Q Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTEL-VNQR 541 Query: 246 IRKIKDWNPPKNY---WFCDLKNLSISSLLE 273 RK + +++ W D + SLL+ Sbjct: 542 -RKANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + ++D+ T L++ L+ GG + + I I + K KPVI V E + Sbjct: 94 DVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIGNEISEFKKSGKPVIA-VGEQYSQ 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + V + Y K LDK+ + K+ PF Sbjct: 153 PQYYLASFADKIYLNKAGFVDIHALSHSNVYFKTLLDKIEAEPHIFRVGTYKSAVEPFIR 212 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +++ +A Q Q + S +H + ++++R IP ++ L+ S Sbjct: 213 DDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQVLLDS 253 >gi|153833866|ref|ZP_01986533.1| signal peptide peptidase SppA, 67K type [Vibrio harveyi HY01] gi|148869808|gb|EDL68782.1| signal peptide peptidase SppA, 67K type [Vibrio harveyi HY01] Length = 616 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQE--------LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIF 87 +A + G I D Q+ + + R +R DD A+++ + SPGGSA+A E I Sbjct: 326 DIAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSPGGSAFASEVIR 385 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + Sbjct: 386 NEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFT 445 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+S V +SP + + ++ A Q Q ++ Y F+ LV +R++ D+ Sbjct: 446 KLGISTDGVGTSPFSGDGIT-TGLSDGASQAFQLGIEHGYKRFISLVGSNRDMSLDEVDK 504 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+WTG +A GL+D +G Sbjct: 505 VAQGRVWTGQDAMSFGLVDQMG 526 >gi|329298719|ref|ZP_08256055.1| protease 4 [Plautia stali symbiont] Length = 618 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A I G I D +E +I DD A+++ ++SPGGS A EAI Sbjct: 327 NIAVILASGAIMDGEESAGNVGGDTTAAQIRDARLDDKIKAIVLRVNSPGGSVTASEAIR 386 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + KPV+ + MAAS GY IS ++ IVAA ++L GSIG+ V+ L Sbjct: 387 EELAAAHDAGKPVVVSMGGMAASGGYWISTPADYIVAAPSTLTGSIGIFGVINTVENSLS 446 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ S + +A Q+MQ +++ Y FV LV+ SR+ + Sbjct: 447 SIGVHSDGVATSPL-ADVSTTKALPTEAQQLMQLTIENGYRNFVGLVAASRHKTPQQIDA 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG++AK GL+D +G Sbjct: 506 IAQGHVWTGSDAKANGLVDALG 527 >gi|119510440|ref|ZP_01629573.1| Peptidase S49, SppA [Nodularia spumigena CCY9414] gi|119464862|gb|EAW45766.1| Peptidase S49, SppA [Nodularia spumigena CCY9414] Length = 273 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 115/198 (58%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I S + ++E ++ + + AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIAGSTRKRVLEALKTVE-EKKFPALLLRIDSPGGTVGDSQEIYSALKRLR 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K Sbjct: 71 KKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S ++ ++Q+++D SY FV ++E+R++ + +DGRI+T Sbjct: 131 IKSGPYKDILSFDRQLTAPEETILQELIDISYQQFVHTIAEARSLEVETVKTFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A ++G++D +G +E+ Sbjct: 191 GEQALELGVVDRLGTEED 208 >gi|197106190|ref|YP_002131567.1| signal peptide peptidase SppA [Phenylobacterium zucineum HLK1] gi|196479610|gb|ACG79138.1| signal peptide peptidase SppA [Phenylobacterium zucineum HLK1] Length = 590 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 16/232 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 E SP V+ AI S +L + I+R +R S A+++ ++SPGGS A E I A++ Sbjct: 311 EGASPFVSNAAIY-----SDDLADAIQRATRAKSVKAIVLRVNSPGGSDTASEQILDAVR 365 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 K + KPV+ + AAS GY I+ ++ IVA T+L GSIGV + L + GV Sbjct: 366 AAKAKGKPVVVSMSSYAASGGYWIASEASAIVAQPTTLTGSIGVFGGKFALGDALARFGV 425 Query: 151 SIKSVK-SSPMKAE---PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 ++ P PF+ A D + Y F+ V+ RN+P ++ Sbjct: 426 DVRQTDVGGPYTGAFNLAEPFTAPQRAAFSRWMDRI---YANFLERVARGRNLPPERVAE 482 Query: 207 LSDGRIWTGAEAKKVGLIDVVGG---QEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ GR+WTGA+A+++GL+D +GG E ++L L + IR++ P Sbjct: 483 IARGRVWTGAQARELGLVDELGGFYQAVERAKALAGLEGEVQIRRMTPMESP 534 >gi|289446284|ref|ZP_06436028.1| protease IV sppA [Mycobacterium tuberculosis CPHL_A] gi|289419242|gb|EFD16443.1| protease IV sppA [Mycobacterium tuberculosis CPHL_A] Length = 613 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 367 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 426 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 427 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 486 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 487 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 546 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 547 RAKVLAGLDE 556 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 88 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 147 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 148 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 207 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M D + W + V++SRNI D L+D +A GLID Sbjct: 208 GFTDAHREAVTRMLDSLQDQV-W--QAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 264 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 265 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 304 >gi|296270823|ref|YP_003653455.1| signal peptide peptidase SppA, 36K type [Thermobispora bispora DSM 43833] gi|296093610|gb|ADG89562.1| signal peptide peptidase SppA, 36K type [Thermobispora bispora DSM 43833] Length = 563 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 12/234 (5%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 +DD A++ + SPGGS A +AI+R + + KPVI + ++AAS GY +S A+N+ Sbjct: 315 KDDKIKAVVFRVDSPGGSYVASDAIWREVLLTRQAGKPVIVSMGDVAASGGYFVSMAANV 374 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +L GSIGV P + L KLGV+ ++V S E + + + Sbjct: 375 IFAHPGTLTGSIGVYGGKPVISELLGKLGVTSEAVSMGENAEMFSTSREFSAAQWERLNT 434 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +D Y FV V+++R + D L+ GR+WTGA+A + GL+D +GG E+ AL Sbjct: 435 WLDRVYEDFVTKVADARGLSKDHAHELAKGRVWTGADAVRNGLVDELGGLED------AL 488 Query: 241 GVDQSIRKIKDWNPPKNYWFCD-LKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + +S + P + Y + L+ + ED M + +V+ W P Sbjct: 489 ALARSRAGLPATAPVRIYPHLNPLERIRPPESSEDRSAAMARLRVE----AWGP 538 >gi|215425966|ref|ZP_03423885.1| protease IV sppA [Mycobacterium tuberculosis T92] Length = 580 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 324 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 383 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 384 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 443 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 444 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 503 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 504 RAKVLAGLDE 513 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 45 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 104 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 105 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 164 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M +DS + V++SRNI D L+D +A GLID Sbjct: 165 GFTDAHREAVTRM---LDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 221 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 222 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 261 >gi|17545763|ref|NP_519165.1| protease transmembrane protein [Ralstonia solanacearum GMI1000] gi|17428057|emb|CAD14746.1| putative protease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 378 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVT-LTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 +I R+V L ++ L ++ S+ + H A + + G+I + + +E Sbjct: 92 RIFFRFVTLGIIGGLLYLFASFEGETVSSGRHTALVTLDGEIAANTNASADNINASLEAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKYKNIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGTNKGMLDPFSPVAPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTGA+A +GL D +GG + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGAKAVDLGLADGIGGTDFVARNI 331 >gi|57168750|ref|ZP_00367881.1| protease IV (PspA) [Campylobacter coli RM2228] gi|305432508|ref|ZP_07401670.1| signal peptide peptidase SppA [Campylobacter coli JV20] gi|57019797|gb|EAL56480.1| protease IV (PspA) [Campylobacter coli RM2228] gi|304444547|gb|EFM37198.1| signal peptide peptidase SppA [Campylobacter coli JV20] Length = 298 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 107/204 (52%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 ++ RI ++G+I DS EL+E+I +D+ ++ + SPGG+ + AI+ +K + Sbjct: 47 NLERIDLKGEILDSSELLEKIISAKNNDNIKGVLFVIDSPGGAFAPSMELALAIKDLKTK 106 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPVI AS YL +N I+A S +GSIGV+ Q + K+G+ ++++ Sbjct: 107 KPVIAYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSELAKKIGIKEQTIQ 166 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K+ + + + + +Q+++D SY F V++ R++ DK ++ R++ Sbjct: 167 AGEFKSAGTFTRAWSEEEREFLQNLIDESYDLFSEFVAKERDLELDKRKDWANARVFLAQ 226 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 AK +GLID + E + L L Sbjct: 227 NAKDLGLIDELSNYENAKKELQEL 250 >gi|293395880|ref|ZP_06640162.1| signal peptide peptidase SppA [Serratia odorifera DSM 4582] gi|291421817|gb|EFE95064.1| signal peptide peptidase SppA [Serratia odorifera DSM 4582] Length = 622 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 11/213 (5%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLI 114 ++ + D A+++ ++SPGGS A E I + V+ KPV+ + MAAS GY I Sbjct: 359 QLRQARLDPKIKAVVLRVNSPGGSVSASEVIRSELAAVRAAGKPVVVSMGGMAASGGYWI 418 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S +N IVA+ ++L GSIG+ + LD +GV V +SP+ A+ + + P+ Sbjct: 419 STPANYIVASPSTLTGSIGIFGVINTYQDTLDSVGVHTDGVATSPL-ADLAVTKALPPEF 477 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 QMMQ +++ Y F+ LV+ +R + ++ ++ G +WTG +AK GL+D +G ++ Sbjct: 478 AQMMQLNIENGYKNFIDLVAGARKMSPEQVDKIAQGHVWTGGDAKNNGLVDQLGDFDDAV 537 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 Q L K+K W+ WF D +L+ Sbjct: 538 QKAAELA------KLKQWHL---NWFVDSPSLA 561 >gi|241662586|ref|YP_002980946.1| peptidase S49 [Ralstonia pickettii 12D] gi|309781168|ref|ZP_07675905.1| signal peptide peptidase SppA, 36K type [Ralstonia sp. 5_7_47FAA] gi|240864613|gb|ACS62274.1| peptidase S49 [Ralstonia pickettii 12D] gi|308919989|gb|EFP65649.1| signal peptide peptidase SppA, 36K type [Ralstonia sp. 5_7_47FAA] Length = 364 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 +I R+V L L+ + + F S H A + + G+I ++ + ++ Sbjct: 78 RIFFRFVALGLIGVLIYAFASLEGETVSTGRHTAIVTLEGEIAANTNASAENINASLQAA 137 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 138 FADDNTVGVILKINSPGGSPVQAGMINDEIRRLRAKYKKIPLYVVVEEMCASGGYYVAAA 197 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V+P+ Q Sbjct: 198 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGSNKGMLDPFSPVSPQQKQY 257 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q+++D + F+ +V + R L G WTGA+A +GL D +G + V +S+ Sbjct: 258 AQEMLDQVHQQFIDVVKQGRGNRLKDDPTLFTGLFWTGAKAVDLGLADAIGSSDFVARSV 317 >gi|187928004|ref|YP_001898491.1| peptidase S49 [Ralstonia pickettii 12J] gi|187724894|gb|ACD26059.1| peptidase S49 [Ralstonia pickettii 12J] Length = 364 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 +I R+V L L+ + + F S H A + + G+I ++ + ++ Sbjct: 78 RIFFRFVALGLIGVLIYAFASLEGETVSTGRHTAIVTLEGEIAANTNASAENINASLQAA 137 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 138 FADDNTVGVILKINSPGGSPVQAGMINDEIRRLRAKYKKIPLYVVVEEMCASGGYYVAAA 197 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V+P+ Q Sbjct: 198 ADRIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGSNKGMLDPFSPVSPQQKQY 257 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q+++D + F+ +V + R L G WTGA+A +GL D +G + V +S+ Sbjct: 258 AQEMLDQVHQQFIDVVKQGRGNRLKDDPTLFTGLFWTGAKAVDLGLADAIGSSDLVARSV 317 >gi|117618146|ref|YP_857847.1| signal peptide peptidase SppA, 67K type [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559553|gb|ABK36501.1| signal peptide peptidase SppA, 67K type [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 614 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 99/181 (54%), Gaps = 4/181 (2%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAG 111 L + + RDD AL++ + SPGGSA+A E I + +K KPV+ + AAS G Sbjct: 350 LADLLADARRDDKVKALVLRVDSPGGSAFAAEQIRAELLALKQAGKPVVISMGSYAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I A+ T+L GSIGV + + L + GV V ++ + Sbjct: 410 YWISADADKIFASPTTLTGSIGVFGMFATIDKALSQYGVHTDGVGTTDYVG--VGLTRAL 467 Query: 172 PKAV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P+ V Q +Q V+ +Y FV LVS+ R + ++T ++GR+WTG +AK +GL+D G Q Sbjct: 468 PEHVGQAIQLNVEDTYQRFVGLVSKGRGLSPEETEKAAEGRVWTGQDAKALGLVDEFGDQ 527 Query: 231 E 231 E Sbjct: 528 E 528 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 14/185 (7%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAY 81 VE S + + Q+++S EL I + DD AL++ G+++ Sbjct: 64 VEQRSQTDPTVQLLRQVDNSDELPSEIVLSDLLWAIKSAKDDDRIKALVIKPQGLQGTSF 123 Query: 82 AG-EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + + AI K KPVI + + YL++ ++ ++ ++ V G+ Sbjct: 124 SKLQEVASAIDAFKESGKPVIA-MADFYTQGQYLLAAHADHVLLNQSGAVVIEGLGVYQT 182 Query: 140 YVKPFLDKLGVSIKSVKSSPMKA--EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 Y K L+KL ++ K K+ EP E++P++ + Q +D + +V V+E R Sbjct: 183 YYKSALEKLNITPHVFKVGTYKSFVEPYTRDEMSPESKEANQRWLDQLWQSYVADVAEQR 242 Query: 198 NIPYD 202 I D Sbjct: 243 EIEPD 247 >gi|126657415|ref|ZP_01728574.1| Peptidase S49, protease IV [Cyanothece sp. CCY0110] gi|126621402|gb|EAZ92114.1| Peptidase S49, protease IV [Cyanothece sp. CCY0110] Length = 597 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 6/176 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + +I D+ A+++ ++SPGGSA + I R IQ ++ KPVI + +AAS GY I+ Sbjct: 339 LRKIGDDEQVKAVVIRINSPGGSATGSDIILREIQLIQETKPVIISMGNVAASGGYWIAT 398 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV---SIKSVKSSPMKAEPSPFSEVNPK 173 I A ++ GSIGV ++ + G+ ++K+ K + + P +E + Sbjct: 399 GGEHIFAQPNTITGSIGVFGVLLNIQEIANNNGITWDTVKTAKFADLGTATRPKTE---Q 455 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + Q V+ Y F+ V++SRN+ +K ++ GR+W+G AKK+GL+D GG Sbjct: 456 ELAIYQKSVNRIYDLFLEKVAQSRNLSKEKVASIAQGRVWSGEMAKKIGLVDSFGG 511 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 17/220 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-------LIERIERISRDDSATALIVSL 73 +V+ S+ ++D P V IR + D + +I+ IE+ S+DD A+ + Sbjct: 50 SVLVLDLSTQIQDKEPFVN---IRDILSDKDQSVLTLSQVIKNIEKASKDDRIKAIFLDG 106 Query: 74 SSPG-GSAYAGEA-IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 S+ GS YA A I +A+ K K K +I ++ YL S A +IV +V Sbjct: 107 SNANSGSGYASFAEIRQALIKFKESGKKIIAYDITVSEQEYYLTSLADTLIVNP-MGVVE 165 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHW 188 G+ + + LD+ G+ ++ V+ KA PF ++++ + Q ++ ++ + ++ Sbjct: 166 LNGISTEPLFWTGALDRYGIGVQVVRVGEYKAAVEPFIRTQLSEENRQQLEVLLGNIWNN 225 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVV 227 F++ V E R I + ++D + I T EA+K+ LID V Sbjct: 226 FLQKVGEVRKIEANNLQQIADNQGILTPQEAQKLKLIDQV 265 >gi|262089779|gb|ACY24872.1| SppA signal peptide peptidase 67K type [uncultured organism] Length = 590 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 106/188 (56%), Gaps = 7/188 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S+ ++E + ++ DD+ AL++ + S GGSA+A E I + ++ +K P+ + +AA Sbjct: 319 SESMLELLRQVKDDDAIKALVIRIDSGGGSAFASEIIRSEVIALREKKIPIYISMGTVAA 378 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE---PS 165 S GY I+ A + I A T++ GSIGV +P ++ L K+G++ V ++ + Sbjct: 379 SGGYWIATAGDKIWAQPTTITGSIGVFGAFPTLEKSLQKIGINTDGVGTTELAGSMRLDR 438 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P SE K VQM VD+ Y F+ LV+++R ++ G +WTG +AK++GL+D Sbjct: 439 PLSEKASKVVQMG---VDNIYQRFITLVADARKQEVKAIDEIAQGHVWTGNKAKEIGLVD 495 Query: 226 VVGGQEEV 233 +G +V Sbjct: 496 ELGTLNDV 503 >gi|260185606|ref|ZP_05763080.1| protease IV sppA [Mycobacterium tuberculosis CPHL_A] Length = 590 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 344 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 403 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 404 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 463 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 464 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 523 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 524 RAKVLAGLDE 533 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 65 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 125 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 184 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M +DS + V++SRNI D L+D +A GLID Sbjct: 185 GFTDAHREAVTRM---LDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 241 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 242 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 281 >gi|289760851|ref|ZP_06520229.1| protease IV sppA [Mycobacterium tuberculosis GM 1503] gi|289708357|gb|EFD72373.1| protease IV sppA [Mycobacterium tuberculosis GM 1503] Length = 364 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + +AAS GY +S Sbjct: 108 LREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVS 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S + P Sbjct: 168 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQ 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E R + D V++ GR+WTGA+A GL+D +GG + V Sbjct: 228 AHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVR 287 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 288 RAKVLAGLDE 297 >gi|194367369|ref|YP_002029979.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas maltophilia R551-3] gi|194350173|gb|ACF53296.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas maltophilia R551-3] Length = 640 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 10/207 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISRDD-SATALIVSLSSPGGSAYAG 83 D+ P VA + G+I RI R +RDD + ++++ ++SPGG +A Sbjct: 338 DSRPQVAVVVAAGEISGGDLPAGRIGGESTSALLRAARDDENVKSVVLRVNSPGGEVFAS 397 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + ++ KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 398 EQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGMVPNFS 457 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q V++ Y F V+++R P + Sbjct: 458 RALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQSVINKGYADFTGRVADARKKPVE 517 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GR+W+GA+AK+ GL+D GG Sbjct: 518 AVDEVARGRVWSGAQAKERGLVDAFGG 544 >gi|283955512|ref|ZP_06373007.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 1336] gi|283792973|gb|EFC31747.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 1336] Length = 298 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 118/236 (50%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINTKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|332708205|ref|ZP_08428195.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] gi|332353031|gb|EGJ32581.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] Length = 605 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 10/205 (4%) Query: 35 SPH-VARIAIRGQIEDSQELIERI--ERISR-------DDSATALIVSLSSPGGSAYAGE 84 S H +A I G I D Q E++ ER ++ D A+++ ++SPGGSA A E Sbjct: 315 SKHKIAIIYAEGSIVDGQGNFEQVGGERFAKQLRELRLDKDIKAVVLRVNSPGGSATASE 374 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I R ++ ++ KPVI + +AAS GY IS S+ I A ++ GSIGV ++ Sbjct: 375 IIQREVRLIREEKPVIVSMGNVAASGGYWISTYSDRIFAEPNTITGSIGVFGVLFNIQEL 434 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + G++ V++ + S + + + Q +V+ Y F+ V+ESR +P K Sbjct: 435 ANNNGLTWDIVQTGSLADIQSTVRPKTDQELAIYQTMVNQIYDQFIDKVAESRKLPKGKV 494 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GR+W+G +AK++GL+D +GG Sbjct: 495 KDIAQGRVWSGIDAKQIGLVDEIGG 519 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 21/250 (8%) Query: 21 TVVYFSWSSHVEDNSP-----HVARIAIRGQ---IEDSQELIERIERISRDDSATALIVS 72 +V+ F S ++ D +P V + GQ I +++++ +++ ++D AL + Sbjct: 50 SVLVFDLSVNISDTNPTSSTSEVIEEVLSGQQTNIIPLRKVLDTLDKATKDKRIVALYLD 109 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR-----KPVITEVHEMAASAGYLISCASNIIVAAETS 127 S+ G A + +++ R K +I ++ YL S A II+ Sbjct: 110 GSASKTVGNTGLANLKEVREALERFRAAGKKIIAYDVDLGEREYYLSSVADTIILNP-MG 168 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSS 185 +V G+ ++ L K G+ ++ V+ K+ PF +++P++ + ++++D Sbjct: 169 VVEINGLNSAQLFLTGALQKYGIGVQVVRVGKYKSAVEPFLLKQLSPESREQTRELLDDL 228 Query: 186 YHWFVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--- 241 + F+ V +SR I P + + + +EAK GL+D VG +EV +L L Sbjct: 229 WDEFLTTVGKSREITPKTLQAIANTKGMLIASEAKTQGLVDQVGYFDEVIATLKELTGEK 288 Query: 242 -VDQSIRKIK 250 D+S RKIK Sbjct: 289 KKDKSFRKIK 298 >gi|283785012|ref|YP_003364877.1| protease IV [Citrobacter rodentium ICC168] gi|282948466|emb|CBG88055.1| protease IV [Citrobacter rodentium ICC168] Length = 618 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S + D VA + G I D +E +I D A+++ Sbjct: 311 ISYYDYSLNTPADTGSSVAVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L G Sbjct: 371 RVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ LD +GV V +SP+ A+ S + P+ Q+MQ +++ Y F+ Sbjct: 431 SIGIFGVINTVENSLDSIGVHTDGVATSPL-ADISMTKALPPEVQQIMQLSIENGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ESR ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVAESRKSTPEQVDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|148926874|ref|ZP_01810552.1| protease [Campylobacter jejuni subsp. jejuni CG8486] gi|205356450|ref|ZP_03223214.1| protease [Campylobacter jejuni subsp. jejuni CG8421] gi|145844451|gb|EDK21559.1| protease [Campylobacter jejuni subsp. jejuni CG8486] gi|205345637|gb|EDZ32276.1| protease [Campylobacter jejuni subsp. jejuni CG8421] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 118/236 (50%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|90408812|ref|ZP_01216955.1| putative protease IV [Psychromonas sp. CNPT3] gi|90310074|gb|EAS38216.1| putative protease IV [Psychromonas sp. CNPT3] Length = 616 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 97/166 (58%), Gaps = 2/166 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ L SPGGSA A E I + + +K K V+ + ++AS GY I+ A++ IVA T Sbjct: 367 AVVIRLDSPGGSATASEKIRQKVLALKKSGKKVVISMASVSASGGYWIASAADHIVAYPT 426 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ Y + L+KLG+ V ++P+ P ++ ++Q ++ Y Sbjct: 427 TLTGSIGIFALYASAEKALNKLGIYNDGVGTAPLSG-LDPTRALDKDIADLLQMAIEHGY 485 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F+ +VSE R++ + ++ GR+WTG +AK++GL+D +G E+ Sbjct: 486 QQFLTVVSEGRHMSVEDVDKIAQGRVWTGTDAKRLGLVDQLGNLED 531 >gi|269962123|ref|ZP_06176477.1| Protease IV [Vibrio harveyi 1DA3] gi|269833207|gb|EEZ87312.1| Protease IV [Vibrio harveyi 1DA3] Length = 616 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQE--------LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIF 87 +A + G I D Q+ + + R +R DD A+++ + SPGGSA+A E I Sbjct: 326 DIAVVVASGTIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSPGGSAFASEVIR 385 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + + Sbjct: 386 NEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFN 445 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+S V +SP + + ++ A + Q ++ Y F+ LV +R++ D+ Sbjct: 446 KLGISTDGVGTSPFSGDGIT-TGLSTGASEAFQLGIEHGYKRFISLVGSNRDMSLDEVDK 504 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+WTG +A GL+D +G Sbjct: 505 VAQGRVWTGQDALSFGLVDQMG 526 >gi|121613641|ref|YP_999794.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81-176] gi|167004769|ref|ZP_02270527.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81-176] gi|1655731|gb|AAC44524.1| PspA [Campylobacter jejuni subsp. jejuni 81-176] gi|87249010|gb|EAQ71972.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81-176] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 118/236 (50%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|261339471|ref|ZP_05967329.1| signal peptide peptidase SppA [Enterobacter cancerogenus ATCC 35316] gi|288318284|gb|EFC57222.1| signal peptide peptidase SppA [Enterobacter cancerogenus ATCC 35316] Length = 618 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 17/232 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYA 82 +D+ +A + G I D QE +I D A+++ ++SPGGS A Sbjct: 322 DDSGDSIAVVFANGAIMDGQETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVSA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V Sbjct: 382 SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTV 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD LGV V +SP+ A+ S + P+ +MMQ +++ Y F+ LV++SR Sbjct: 442 ENSLDYLGVHTDGVATSPL-ADVSVTKSLPPEVSEMMQLSIENGYKRFITLVADSRKKTP 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++ ++ G +WTG +AK GL+D +G ++ + L K+K W+ Sbjct: 501 EQIDQIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELA------KLKQWH 546 >gi|13540860|ref|NP_110548.1| secreted serine protease (ClpP class) [Thermoplasma volcanium GSS1] gi|14324243|dbj|BAB59171.1| proteinase IV [Thermoplasma volcanium GSS1] gi|215414354|emb|CAT00893.1| signal peptide peptidase-like protein [Thermoplasma volcanium GSS1] Length = 230 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 2/203 (0%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ++ RI I G I + L ++ S LI+ +S GG A + + I ++K++ Sbjct: 2 YLLRINIEGTINYGLYKYLYPALKAAEGKKSIAGLILVFNSGGGDAASSQLIHDLVKKIR 61 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV + + AS Y I+ AS I A +TSL+GSIGV+ P VK ++K+GV + Sbjct: 62 KKKPVYSLALGICASGAYWIASASTKIYAIDTSLIGSIGVISIRPNVKKLMEKIGVDVMV 121 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 KS K SPFSE N + + Q ++D + F R V+E R IP +K +++G +++ Sbjct: 122 YKSGKYKDMTSPFSEPNEEEKSVYQRLLDDIFEKFKRSVAEDRGIPSEKIDEIANGMVYS 181 Query: 215 GAEAKKVGLIDVVGGQEEVWQSL 237 A GLID + +++ L Sbjct: 182 AKMAADNGLIDRIANYDDLVSDL 204 >gi|86154048|ref|ZP_01072249.1| PspA [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842462|gb|EAQ59676.1| PspA [Campylobacter jejuni subsp. jejuni HB93-13] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 118/236 (50%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|239995030|ref|ZP_04715554.1| signal peptide peptidase SppA, 67K type [Alteromonas macleodii ATCC 27126] Length = 621 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 17/211 (8%) Query: 31 VEDNSPHVARIAIRGQIEDSQEL--------IERIERISR-DDSATALIVSLSSPGGSAY 81 +E + VA + +G I D + R+ R +R DD+ A+++ + SPGGSA+ Sbjct: 325 IESDMDKVAIVVAKGTILDGNQKAGTIGGDSTARLLRKARLDDNVKAVVLQIDSPGGSAF 384 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + +++ KPVI + AAS GY I+ +++ I+A+ +++ GSIGV + Sbjct: 385 ASEIIRQEVLQLQQAGKPVIASMSTYAASGGYWIAASTDRIIASPSTITGSIGVFGMFMT 444 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA---VQMMQDVVDSSYHWFVRLVSESR 197 + LD LG+ V S+ E + FS V P A Q++Q V+++Y F+ LVS +R Sbjct: 445 YENSLDYLGIHSDGVGST----ELAGFSTVRPLAPEFGQILQRNVENTYGNFLSLVSNAR 500 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ ++ GR+W G +A ++GL+D +G Sbjct: 501 GMSVEEVDSVAQGRVWIGEDAIELGLVDQLG 531 >gi|121535672|ref|ZP_01667477.1| signal peptide peptidase SppA, 36K type [Thermosinus carboxydivorans Nor1] gi|121305776|gb|EAX46713.1| signal peptide peptidase SppA, 36K type [Thermosinus carboxydivorans Nor1] Length = 308 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 104/170 (61%), Gaps = 2/170 (1%) Query: 61 SRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCAS 118 +RDD+A A+++ ++SPGGSA A + + ++K++ K V+T + ++AAS GY I+ + Sbjct: 74 ARDDAAVRAVVLRINSPGGSAPASQEVGEEVKKLRAAGKIVVTSMGDVAASGGYWIAALT 133 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I A ++ GSIGV Y + K+G+ + +KS P K SP + + ++ Sbjct: 134 DKIYANPATMTGSIGVYIPYANWEELYRKIGIRQEKIKSGPHKDILSPERSMTGEERAII 193 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q +VD Y+ FV +V+E R + + L+DGRI+TG +AK++GL+D +G Sbjct: 194 QAMVDDMYNQFVAVVAEGRKMDPARVRQLADGRIYTGNQAKELGLVDELG 243 >gi|296168584|ref|ZP_06850388.1| protease IV [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896647|gb|EFG76286.1| protease IV [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 594 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DDS +A+++ ++SPGG+ A E+I+R + + + R KPV+ + +AAS GY +S ++ I Sbjct: 344 DDSVSAIVLRVNSPGGTITASESIWREVTRARKRGKPVVASMGAVAASGGYYVSMGADAI 403 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++ GSIGV+ ++ L++LGV +V+++ S + P+ + Sbjct: 404 VANPATVTGSIGVITGKLVIRDLLERLGVGSDTVRTNANADAWSIDAPFTPEQRAHREAE 463 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSLYAL 240 D Y FV+ V+E+RN+ + ++ GRIWTGA+A GL+D +GG + V ++ Sbjct: 464 ADLFYADFVQRVAEARNLTTEAAESVAQGRIWTGADALDRGLVDELGGFRAAVRRAKVLA 523 Query: 241 GVDQ 244 G+D+ Sbjct: 524 GLDE 527 >gi|257869238|ref|ZP_05648891.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803402|gb|EEV32224.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 341 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 17/229 (7%) Query: 33 DNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 D++ + R+ + G I D Q +E + D + ++ ++SPGG Sbjct: 57 DSNNRILRLTLEGTIANTSGGGLFSTEGYDHQLFLEELRAAQEDPTIKGILFEVNSPGGG 116 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I R ++K+K PV + AAS GY +S ++ I A + ++ GSIGV+ Sbjct: 117 VYESAEIAREMKKIKEIGIPVYVSMKNTAASGGYYVSAGADKIFATDETVTGSIGVIMSG 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 LDKLG+ + KS +K S + +++Q VD++Y FV +V+E R Sbjct: 177 LNYSGLLDKLGIEDSTYKSGALKDMGSSTRAATDEDKKVLQTYVDNAYGRFVSIVAEGRG 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + + ++DGRI+ G +A + GL+D +G E+ + +L A DQ + Sbjct: 237 MSEEAVRKIADGRIYDGQQAVENGLVDEIGFPEDAFAALEA---DQGLE 282 >gi|281419691|ref|ZP_06250690.1| signal peptide peptidase SppA [Prevotella copri DSM 18205] gi|281406220|gb|EFB36900.1| signal peptide peptidase SppA [Prevotella copri DSM 18205] Length = 594 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 9/186 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S ++I+ ++ ++ + A+++ ++S GG AYA E I+RA++++ +KPV+ + MAAS Sbjct: 330 STKVIKDLQELADNSQVKAVVLRINSGGGDAYASEQIWRAVKELNKKKPVVVSMGGMAAS 389 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPS--- 165 Y +S + I+A T+L GSIG+ P + KLG VK++ S Sbjct: 390 GAYYMSMGAQYIMAQPTTLTGSIGIFGALPDFSDLMTKKLGFKYDEVKTNRNSTYASAGM 449 Query: 166 --PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 P+S + + MQ+ V+ Y F V+E R + ++ ++ GR+W G +AKK+ L Sbjct: 450 SRPWS---AEEIATMQNYVNRGYSLFRNRVAEGRKMSTEQVEKIAQGRVWLGTDAKKIKL 506 Query: 224 IDVVGG 229 ID GG Sbjct: 507 IDGFGG 512 >gi|86151511|ref|ZP_01069726.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 260.94] gi|157414382|ref|YP_001481638.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81116] gi|315123672|ref|YP_004065676.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841858|gb|EAQ59105.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 260.94] gi|157385346|gb|ABV51661.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81116] gi|307747028|gb|ADN90298.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni M1] gi|315017394|gb|ADT65487.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315930942|gb|EFV09918.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 327] Length = 298 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 118/236 (50%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVVDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|298492790|ref|YP_003722967.1| signal peptide peptidase SppA ['Nostoc azollae' 0708] gi|298234708|gb|ADI65844.1| signal peptide peptidase SppA, 67K type ['Nostoc azollae' 0708] Length = 611 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 10/212 (4%) Query: 28 SSHVEDNSPH-VARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPG 77 S VE NS + +A + G+I D + + +I +D ++++ ++SPG Sbjct: 308 SMGVERNSENKIAVVYAEGEIVDGKGEDGEIGGDRFAKIFNKIRQDQDVKSVVLRINSPG 367 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA E I R I+ + KPVI + ++AAS GY I+ SN I A ++ GSIGV Sbjct: 368 GSATVSEIIQREIKLTRQAKPVIVSMGDVAASGGYWIASDSNRIFAETNTITGSIGVFGL 427 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + G++ +VK++ + +P+ + + Q V+ Y+ F+ V++ R Sbjct: 428 LLNGQKLAKNNGITWDTVKTAQYADNQTVSRPKSPQELALYQRSVNRIYNMFINKVAQGR 487 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +P K ++ GR+W+G AK++GL+D +GG Sbjct: 488 KLPQQKVAEIAQGRVWSGVAAKEIGLVDEIGG 519 >gi|148264257|ref|YP_001230963.1| signal peptide peptidase SppA, 36K type [Geobacter uraniireducens Rf4] gi|146397757|gb|ABQ26390.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Geobacter uraniireducens Rf4] Length = 323 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 4/207 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAAS 109 E+ E +++ +DD +IV ++SPGG+ A + I + K RK PV + + AS Sbjct: 74 EVKEALQKAEKDDDIAGVIVRINSPGGTVTASDIIHHELLAFKARKKVPVYACIMGIGAS 133 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A++ I A T++ GSIGVL V+ L K+GVS +VKS K SPF Sbjct: 134 GGYYVATAADEISAHPTAVTGSIGVLLMRFEVEGLLTKIGVSEHTVKSGDKKDMLSPFRP 193 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 P+ +++QDV++ + FV +V + + +L+DGRI+T +A + LID + Sbjct: 194 ATPEEEKIIQDVINRLFGRFVDVVQARPGNKLERKELEILADGRIYTAEQALQAKLIDRI 253 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNP 254 G ++ ++ G + R I + P Sbjct: 254 GYLDDTVSAVKKAGNIEQARVISYYRP 280 >gi|289642492|ref|ZP_06474636.1| signal peptide peptidase SppA, 36K type [Frankia symbiont of Datisca glomerata] gi|289507666|gb|EFD28621.1| signal peptide peptidase SppA, 36K type [Frankia symbiont of Datisca glomerata] Length = 689 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 1/198 (0%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRK 97 R +RG S L RD+ A + + SPGGS A + I R +++ + + Sbjct: 374 GRAPLRGPAMTSDALTAAFRAAGRDEDVAAAVFRVDSPGGSYVASDLIRREVERFQATGR 433 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV+ + +AAS GY ++ ++ IVA +L GSIGV V+ LDK+GV +V Sbjct: 434 PVVVSMGSVAASGGYFVALGADAIVAHPGTLTGSIGVFGGKQVVRELLDKIGVRFGAVAE 493 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP E +P + + + +D Y FV V+ R + + ++ GR+WTGA+ Sbjct: 494 GENALMTSPRREFSPAERKKLDEFLDRVYEDFVTKVAAGRKMTPEAVHEVARGRVWTGAD 553 Query: 218 AKKVGLIDVVGGQEEVWQ 235 A + GL+DV+ G + + Sbjct: 554 AHERGLVDVLVGLSQACE 571 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 21/198 (10%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA--- 107 + +++ + R DD A LI ++ P G+ A +Q++++ E A Sbjct: 55 RTVVDGLRRAREDDRAATLIARIA-PCGTPLA------RVQEIRDAVIAFREAGGTAFAY 107 Query: 108 ---------ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 + Y ++CA + I A +G GV + P+++ LD+LG+ I+ + Sbjct: 108 ADAFGEFGGGTVPYYLACAFDQIWLAPPGELGLTGVALETPFLRDALDRLGIEIQVGQRH 167 Query: 159 PMKAEPSPFSEVNPKAV--QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K + F E + A + + +V SS V ++ +R + + L D + Sbjct: 168 EYKNAVNTFVERDFTAAHREASERIVVSSLSMIVDGIATARGLSPARVRELIDNAPLSAE 227 Query: 217 EAKKVGLIDVVGGQEEVW 234 +A++ GL+D +G ++EV+ Sbjct: 228 QARRGGLVDRLGYRDEVY 245 >gi|319760562|ref|YP_004124500.1| signal peptide peptidase SppA [Candidatus Blochmannia vafer str. BVAF] gi|318039276|gb|ADV33826.1| signal peptide peptidase SppA [Candidatus Blochmannia vafer str. BVAF] Length = 619 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 24/215 (11%) Query: 31 VEDNSPHVARIAIRGQI----------EDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++N+ +A I I+G I ++ +I + A+I+ ++SPGGS Sbjct: 321 TKNNNNQIAIICIQGTIIHGNNDIAGSTGGDTIVRKIRNARFNPKIKAIILRVNSPGGSV 380 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 +A E I + I +N KP+I + +AAS GY IS +N I+A+ ++L GSIGV Sbjct: 381 HASELIRQEIIATRNSGKPIIVSMGNIAASGGYWISTPANFIIASNSTLTGSIGVFGIIN 440 Query: 140 YVKPFLDKLGVSIKSVKSSPM------KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + LD +GV V +SP+ KA P+ F MMQ V++SY +F++ V Sbjct: 441 TFEDSLDTIGVHSDEVNTSPVANLSIAKALPNEFK-------NMMQLYVNTSYQYFIKTV 493 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ R ++ G IW G +A K GLID +G Sbjct: 494 AKFRCKTITDIDRVAQGHIWLGYDAIKNGLIDKIG 528 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 13/156 (8%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 E+I + + D + T LI+ L + GGS + E I +A+ + KN I + + Sbjct: 97 EIIHILRQAKNDTNITGLILLLKNFSGGSQSSLEYIGKALYEFKNTGKPIYAISDHYDQI 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 YL++ +N I V G+ Y + L L ++ + K+ PF+ Sbjct: 157 QYLLASYANKIYITPQGEVNLRGISTHKLYYQSLLKNLKINTHVFRVGSYKSAIEPFTRD 216 Query: 171 NPKAVQMMQDVVDSSYHW-------FVRLVSESRNI 199 N M V D W +++++S +RNI Sbjct: 217 N-----MSPQVRDEENIWIHQLWDQYLKIISLNRNI 247 >gi|323186216|gb|EFZ71568.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1357] Length = 618 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 120/231 (51%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIE--------RISR-DDSATALIVSLSSPGGSAYAG 83 D + + G I D +E ++ R +R D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGKVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|113954895|ref|YP_731303.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CC9311] gi|113882246|gb|ABI47204.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CC9311] Length = 258 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 141/263 (53%), Gaps = 12/263 (4%) Query: 38 VARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARIAI G I S + +++ ++ + ++ AL++ + SPGG+ + I A+ +++ Sbjct: 1 MARIAIEGAITGSTRRRVLKALKEV-QEREFPALLLRIDSPGGTVGDSQEIHSALLRLRE 59 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+ ++AS G + A+ IV+ ++ GSIGV+ + + LD++GV ++ Sbjct: 60 KGCHVVASFGNISASGGVYVGVAAETIVSNPGTITGSIGVILRGNNLSKLLDRVGVKFET 119 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS K SP + + +++Q ++DSSY FV V+E R + + +DGR+++ Sbjct: 120 VKSGVFKDILSPDRALGAEERELLQALIDSSYEQFVAAVAEGRKLDPSRVREFADGRVFS 179 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLL- 272 GA+AK +GL+D +G +E L +D+ ++ P+ L+ LS S+LL Sbjct: 180 GAQAKDLGLVDELGDEERARVLAAQLADLDEERCRVVTLGKPRKPL---LQGLSGSNLLV 236 Query: 273 --EDTIPLMKQTKVQGLWAVWNP 293 ++ + + + Q LW ++ P Sbjct: 237 RIQELVTVEMELSGQPLW-LFRP 258 >gi|327252883|gb|EGE64537.1| signal peptide peptidase SppA, 67K type [Escherichia coli STEC_7v] Length = 618 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVVTTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + + E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|114776783|ref|ZP_01451826.1| protease IV [Mariprofundus ferrooxydans PV-1] gi|114552869|gb|EAU55300.1| protease IV [Mariprofundus ferrooxydans PV-1] Length = 609 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 116/214 (54%), Gaps = 13/214 (6%) Query: 32 EDNSPHVARIAI---RGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 E H R+ I G I D ++ ++E +++ D++ A+++ + SPGGS Sbjct: 305 EKEHKHAGRVGIIVASGMILDGEQPPGSIGSDTMVEMLQQAREDNAIKAVVLRIDSPGGS 364 Query: 80 AYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A A E I AI ++ K KPV+ + +AAS GY ++ +N I A+ T++ GSIG Sbjct: 365 AQASEEIRTAIMRLQKAGKPVVVSMGGVAASGGYWMAAPANEIWASPTTITGSIGAFGVM 424 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ L++LG+ + ++ + P + P+ ++MQ + Y F+ +V+ R Sbjct: 425 LNLQQGLEQLGIHSDGLGTTTIAGGMRPDRAMPPELSRVMQLTISDVYQHFLSVVASGRK 484 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + +++GR+W+G +A+++GL+D +GG ++ Sbjct: 485 MDKSRVAAIAEGRVWSGLDAQRLGLVDHLGGFDD 518 >gi|300904625|ref|ZP_07122461.1| signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|301303940|ref|ZP_07210058.1| signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|300403456|gb|EFJ86994.1| signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|300840737|gb|EFK68497.1| signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|315257426|gb|EFU37394.1| signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 666 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 28/266 (10%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEEAQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--- 259 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Y+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH--LEYYVDE 601 Query: 260 --FCD--LKNL--SISSLLEDTIPLM 279 F D + N+ S+ ++L DT M Sbjct: 602 PTFFDKVMDNMSGSVRAMLPDTFQAM 627 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKDFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|108757755|ref|YP_631990.1| signal peptide peptidase SppA [Myxococcus xanthus DK 1622] gi|108461635|gb|ABF86820.1| signal peptide peptidase SppA [Myxococcus xanthus DK 1622] Length = 605 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 109/197 (55%), Gaps = 2/197 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G++ S+ +++ + RD + A++V +SSPGG+ A E + A+Q+V +KPVI + Sbjct: 331 GKMATSETVVKALRAAGRDKRSKAVVVYISSPGGTPLASEQMLEAVQRVARKKPVIAYMD 390 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + ASAGY+++ + I +A ++VGSIGV + ++KLGV K+V A Sbjct: 391 RVCASAGYMVAVGAKEIWSAPHAMVGSIGVFAGKFDMSGLMEKLGVH-KTVLVRGQNAAM 449 Query: 165 SPFSE-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 FS P+ ++ V+ Y F+ +V++ R ++ L++GR+++G K VGL Sbjct: 450 LSFSRGFTPQEEATLEAEVEEMYQAFLDIVAKGRGRTKEEIHQLAEGRVYSGVRGKAVGL 509 Query: 224 IDVVGGQEEVWQSLYAL 240 +D V G EE + +L Sbjct: 510 VDQVAGFEEACRHALSL 526 >gi|242398488|ref|YP_002993912.1| Putative protease [Thermococcus sibiricus MM 739] gi|242264881|gb|ACS89563.1| Putative protease [Thermococcus sibiricus MM 739] Length = 335 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 114/203 (56%), Gaps = 3/203 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ E + +A + + G I+++ ++I +I I DD+ +++ + SPGG Sbjct: 83 TNRTEKANVTIAILPVVGPIDETAAFDVISKIREIRNDDNIGGVVLWIESPGGYVGPVIT 142 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I++ ++K+ KP++ MAAS GYLI+CA++ I+A + VGSIGVL+ + ++ Sbjct: 143 IYKELKKLSYEKPIVAYTGGMAASGGYLIACAADKIIADPLAEVGSIGVLYVHYDLEQNY 202 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + GV + K+ K + + ++ + +M+++ V++ + +F+++V E RN+ + T Sbjct: 203 AQNGVKVNVFKTGKYKDTGAEWRDLTEEEREMIKNEVNTYFEYFLQVVGEGRNLDLNTTR 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 DGR+W +E K L+D G Sbjct: 263 KYGDGRVWFASEVKGT-LVDDTG 284 >gi|323968532|gb|EGB63938.1| signal peptide peptidase SppA [Escherichia coli M863] Length = 637 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVVTTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + + E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|320194522|gb|EFW69153.1| Protease IV [Escherichia coli WV_060327] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++ A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSSAAREADSRWIGELWKNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|320181201|gb|EFW56120.1| Protease IV [Shigella boydii ATCC 9905] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKADRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|331683273|ref|ZP_08383874.1| signal peptide peptidase SppA, 67K type [Escherichia coli H299] gi|331079488|gb|EGI50685.1| signal peptide peptidase SppA, 67K type [Escherichia coli H299] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADISITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|115380005|ref|ZP_01467055.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|310820408|ref|YP_003952766.1| Signal peptide peptidase SppA, 36K type [Stigmatella aurantiaca DW4/3-1] gi|115362984|gb|EAU62169.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|309393480|gb|ADO70939.1| Signal peptide peptidase SppA, 36K type [Stigmatella aurantiaca DW4/3-1] Length = 828 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 1/176 (0%) Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 R D + A+++ + S GG A + ++RA+ + K KPVI + ++AAS GY + A+ Sbjct: 571 RAQMDPAVVAIVLRVDSGGGDVLASDLMYRAVLEAKKVKPVIASMGDVAASGGYYAAMAA 630 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + I A T+L GSIGV + P +K L DKLG++ +++ +P+ + P+ + Sbjct: 631 DEIFANPTTLTGSIGVFYLKPALKGLLEDKLGITQQTLPRAPLADLLGLWRPWTPEEQRA 690 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +Q VD++Y F+ +E+R + + L+ GR+W+G +A GL+D +GG E Sbjct: 691 VQAWVDATYDTFITYAAEARKLEKAQVDTLARGRVWSGKDAHARGLVDRLGGLAEA 746 >gi|300917670|ref|ZP_07134319.1| signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300415071|gb|EFJ98381.1| signal peptide peptidase SppA [Escherichia coli MS 115-1] Length = 666 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|293415083|ref|ZP_06657726.1| signal peptide peptidase SppA [Escherichia coli B185] gi|291432731|gb|EFF05710.1| signal peptide peptidase SppA [Escherichia coli B185] Length = 666 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|293446138|ref|ZP_06662560.1| signal peptide peptidase SppA [Escherichia coli B088] gi|300823176|ref|ZP_07103309.1| signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|331677647|ref|ZP_08378322.1| signal peptide peptidase SppA, 67K type [Escherichia coli H591] gi|291322968|gb|EFE62396.1| signal peptide peptidase SppA [Escherichia coli B088] gi|300524330|gb|EFK45399.1| signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|324016441|gb|EGB85660.1| signal peptide peptidase SppA [Escherichia coli MS 117-3] gi|331074107|gb|EGI45427.1| signal peptide peptidase SppA, 67K type [Escherichia coli H591] Length = 666 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ V+ +R IP + ++ GA+ VGL G Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQ--------VFPGAQGLLVGLTKTGG 318 >gi|218554334|ref|YP_002387247.1| protease 4 [Escherichia coli IAI1] gi|218361102|emb|CAQ98685.1| protease IV (signal peptide peptidase) [Escherichia coli IAI1] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|82543829|ref|YP_407776.1| protease 4 [Shigella boydii Sb227] gi|81245240|gb|ABB65948.1| protease IV [Shigella boydii Sb227] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQW 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|301026499|ref|ZP_07189929.1| signal peptide peptidase SppA [Escherichia coli MS 69-1] gi|300395517|gb|EFJ79055.1| signal peptide peptidase SppA [Escherichia coli MS 69-1] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 13/198 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-----VLSDGRIWTGAEAKKVG- 222 +++P A + + + ++ V+ +R IP + VL +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGVL-EGLTKTGGDTAKYAL 277 Query: 223 ---LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 278 ENKLVDALASSAEIEKTL 295 >gi|290475449|ref|YP_003468337.1| protease IV, a signal peptide peptidase [Xenorhabdus bovienii SS-2004] gi|289174770|emb|CBJ81571.1| protease IV, a signal peptide peptidase [Xenorhabdus bovienii SS-2004] Length = 636 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 25/221 (11%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 + ++ ++A I G I D ++ + E++ + + A+++ ++SPGGS A Sbjct: 326 DQSNSNIAVIIAEGAIMDGRQSEGIAGGDTIAEQLREARLNPNIKAIVLRVNSPGGSISA 385 Query: 83 GEAI------FRAIQKVKNR---------KPVITEVHEMAASAGYLISCASNIIVAAETS 127 E I R VKN+ KP++ + +AAS GY IS +N I+A + + Sbjct: 386 SELIRSELVAIREGTTVKNKEGHTVKENQKPIVVSMGGLAASGGYWISTPANYIIADKNT 445 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIGV + L+ LGV+ + + P+ A+ S +NP +MQ ++S YH Sbjct: 446 LTGSIGVFGVLNTYEKGLNYLGVNTDGISTYPL-ADISVTKGINPMFSDVMQLSIESGYH 504 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LV++SR ++ ++ GR+W+G++AKK GL+D +G Sbjct: 505 KFIELVAQSRQKTQNEIKEIAQGRVWSGSDAKKNGLVDQLG 545 >gi|209919128|ref|YP_002293212.1| protease 4 [Escherichia coli SE11] gi|218695325|ref|YP_002402992.1| protease 4 [Escherichia coli 55989] gi|209912387|dbj|BAG77461.1| protease IV [Escherichia coli SE11] gi|218352057|emb|CAU97794.1| protease IV (signal peptide peptidase) [Escherichia coli 55989] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ V+ +R IP + ++ GA+ VGL G Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQ--------VFPGAQGLLVGLTKTGG 270 >gi|39995926|ref|NP_951877.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] gi|39982690|gb|AAR34150.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] gi|298504941|gb|ADI83664.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens KN400] Length = 321 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 4/204 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E + + RD LI+ ++SPGG+ A + I + K R+ PV + + AS GY Sbjct: 79 EVLLKAERDPKVAGLILRINSPGGTVTASDIIRHDLLAFKERRNLPVSACIMGIGASGGY 138 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ A++ I A T+L GSIGVL V+ L K+GV K++KS K SPF P Sbjct: 139 YVATAADGITAHPTALTGSIGVLLMTFNVEGLLGKVGVEEKTIKSGGKKDLLSPFRRATP 198 Query: 173 KAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +++Q V+D + FV +V + L L+DGRI++ A+A GLID +G Sbjct: 199 EEERLVQGVIDQFHGRFVDVVQARPGNRLSRHDLLTLADGRIFSAADALAAGLIDRIGYL 258 Query: 231 EEVWQSLYALGVDQSIRKIKDWNP 254 ++V SL D R + + P Sbjct: 259 DDVIASLRDRIGDPDARVVTYFRP 282 >gi|331663248|ref|ZP_08364158.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA143] gi|331059047|gb|EGI31024.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA143] Length = 622 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADISITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + + E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKTL 299 >gi|323186946|gb|EFZ72264.1| signal peptide peptidase SppA, 67K type [Escherichia coli RN587/1] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKEDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|191171758|ref|ZP_03033305.1| protease 4 [Escherichia coli F11] gi|227885806|ref|ZP_04003611.1| S49 family peptidase IV [Escherichia coli 83972] gi|190908088|gb|EDV67680.1| protease 4 [Escherichia coli F11] gi|227837379|gb|EEJ47845.1| S49 family peptidase IV [Escherichia coli 83972] Length = 622 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKTL 299 >gi|194477179|ref|YP_002049358.1| signal peptide peptidase SppA (protease IV) [Paulinella chromatophora] gi|171192186|gb|ACB43148.1| signal peptide peptidase SppA (protease IV) [Paulinella chromatophora] Length = 276 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 113/205 (55%), Gaps = 2/205 (0%) Query: 38 VARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI + G I +E + + R + + +++ + SPGG+ + I A+ +++N+ Sbjct: 13 IARICLEGPITGVVREWMLSVLRNVEEQRMSGILLRIDSPGGTVGDSQEIHAALLRLRNK 72 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+ ++AS G I A++ IV+ ++ GSIGV+ + + L+++G+ +++ Sbjct: 73 GCKVVASFGNISASGGVYIGVAADKIVSNPGTITGSIGVVLRGNNLAKLLERIGIRFETI 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS K SP ++P ++QD++DSSY+ FV +++ R + DGRI++G Sbjct: 133 KSGIYKDILSPDRALSPAERNVLQDLIDSSYNQFVAAIAQGRGLKESFVREFGDGRIFSG 192 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL 240 A+A +GL+D +G +E Q L L Sbjct: 193 AQALDLGLVDALGDEETALQLLSQL 217 >gi|222033518|emb|CAP76259.1| Protease 4 [Escherichia coli LF82] gi|312946365|gb|ADR27192.1| protease 4 [Escherichia coli O83:H1 str. NRG 857C] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|88859293|ref|ZP_01133933.1| protease IV, a signal peptide peptidase [Pseudoalteromonas tunicata D2] gi|88818310|gb|EAR28125.1| protease IV, a signal peptide peptidase [Pseudoalteromonas tunicata D2] Length = 624 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 DS + R R+ DD A+++ + S GGS +A E I + +K KPVI + +A Sbjct: 349 DSTSALLRKARL--DDKVKAVVLRIDSGGGSMFASELIRAEVLALKAAGKPVIASMSSVA 406 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY I+ A+N I AA +++ GSIG+ + L +LGV V ++ M A SP Sbjct: 407 ASGGYWIASAANEIWAAPSTITGSIGIFGTVMTFENSLARLGVYSDGVSTTEM-AGFSPM 465 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 E+NP+ M+Q ++ Y+ F+ +V+E+R + ++ ++ GR+W +AK++GL+D + Sbjct: 466 RELNPQLGNMIQMSIERGYNRFLTIVAEARGMSIEEVDHIAQGRVWIATQAKELGLVDHL 525 Query: 228 GGQEEVWQS 236 G +++ ++ Sbjct: 526 GNKQDAIEA 534 >gi|187733275|ref|YP_001880563.1| protease 4 [Shigella boydii CDC 3083-94] gi|194428542|ref|ZP_03061081.1| protease 4 [Escherichia coli B171] gi|194433484|ref|ZP_03065762.1| protease 4 [Shigella dysenteriae 1012] gi|260844115|ref|YP_003221893.1| protease IV [Escherichia coli O103:H2 str. 12009] gi|260855631|ref|YP_003229522.1| protease IV [Escherichia coli O26:H11 str. 11368] gi|260868291|ref|YP_003234693.1| protease IV [Escherichia coli O111:H- str. 11128] gi|307310662|ref|ZP_07590308.1| signal peptide peptidase SppA, 67K type [Escherichia coli W] gi|187430267|gb|ACD09541.1| protease 4 [Shigella boydii CDC 3083-94] gi|194413420|gb|EDX29703.1| protease 4 [Escherichia coli B171] gi|194418247|gb|EDX34338.1| protease 4 [Shigella dysenteriae 1012] gi|209768378|gb|ACI82501.1| protease IV [Escherichia coli] gi|257754280|dbj|BAI25782.1| protease IV [Escherichia coli O26:H11 str. 11368] gi|257759262|dbj|BAI30759.1| protease IV [Escherichia coli O103:H2 str. 12009] gi|257764647|dbj|BAI36142.1| protease IV [Escherichia coli O111:H- str. 11128] gi|306908840|gb|EFN39336.1| signal peptide peptidase SppA, 67K type [Escherichia coli W] gi|315061069|gb|ADT75396.1| protease IV (signal peptide peptidase) [Escherichia coli W] gi|320176722|gb|EFW51758.1| Protease IV [Shigella dysenteriae CDC 74-1112] gi|320641615|gb|EFX11003.1| protease 4 [Escherichia coli O157:H7 str. G5101] gi|320646975|gb|EFX15808.1| protease 4 [Escherichia coli O157:H- str. 493-89] gi|320652257|gb|EFX20555.1| protease 4 [Escherichia coli O157:H- str. H 2687] gi|320657858|gb|EFX25620.1| protease 4 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320668330|gb|EFX35157.1| protease 4 [Escherichia coli O157:H7 str. LSU-61] gi|323152988|gb|EFZ39257.1| signal peptide peptidase SppA, 67K type [Escherichia coli EPECa14] gi|323158527|gb|EFZ44542.1| signal peptide peptidase SppA, 67K type [Escherichia coli E128010] gi|323166270|gb|EFZ52045.1| signal peptide peptidase SppA, 67K type [Shigella sonnei 53G] gi|323175160|gb|EFZ60774.1| signal peptide peptidase SppA, 67K type [Escherichia coli LT-68] gi|323180545|gb|EFZ66090.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1180] gi|323948173|gb|EGB44162.1| signal peptide peptidase SppA [Escherichia coli H120] gi|324119252|gb|EGC13140.1| signal peptide peptidase SppA [Escherichia coli E1167] gi|332085809|gb|EGI90973.1| signal peptide peptidase SppA, 67K type [Shigella dysenteriae 155-74] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|320184010|gb|EFW58833.1| Protease IV [Shigella flexneri CDC 796-83] gi|332096360|gb|EGJ01361.1| signal peptide peptidase SppA, 67K type [Shigella boydii 3594-74] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|117623937|ref|YP_852850.1| protease 4 [Escherichia coli APEC O1] gi|218558634|ref|YP_002391547.1| protease 4 [Escherichia coli S88] gi|237705717|ref|ZP_04536198.1| protease IV [Escherichia sp. 3_2_53FAA] gi|115513061|gb|ABJ01136.1| protease IV [Escherichia coli APEC O1] gi|218365403|emb|CAR03126.1| protease IV (signal peptide peptidase) [Escherichia coli S88] gi|226900474|gb|EEH86733.1| protease IV [Escherichia sp. 3_2_53FAA] gi|315286440|gb|EFU45875.1| signal peptide peptidase SppA [Escherichia coli MS 110-3] gi|323952272|gb|EGB48145.1| signal peptide peptidase SppA [Escherichia coli H252] gi|323956534|gb|EGB52275.1| signal peptide peptidase SppA [Escherichia coli H263] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAARETDSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|157161228|ref|YP_001458546.1| protease 4 [Escherichia coli HS] gi|170019887|ref|YP_001724841.1| protease 4 [Escherichia coli ATCC 8739] gi|312969795|ref|ZP_07783978.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1827-70] gi|157066908|gb|ABV06163.1| protease 4 [Escherichia coli HS] gi|169754815|gb|ACA77514.1| signal peptide peptidase SppA, 67K type [Escherichia coli ATCC 8739] gi|310338080|gb|EFQ03169.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1827-70] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|193068967|ref|ZP_03049926.1| protease 4 [Escherichia coli E110019] gi|192957762|gb|EDV88206.1| protease 4 [Escherichia coli E110019] Length = 622 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|90020544|ref|YP_526371.1| translation elongation factor G [Saccharophagus degradans 2-40] gi|89950144|gb|ABD80159.1| signal peptide peptidase SppA, 67K type [Saccharophagus degradans 2-40] Length = 610 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 13/219 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSS 75 F+ + ++ DN + I G I D + + + + +D+S AL++ + S Sbjct: 305 FTPNLNMHDN---IGLIVASGTIYDGRHPEGTIGGDSMADLLREAQKDNSLKALVIRVDS 361 Query: 76 PGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GGSA+A E I + I +K + P+ + +AAS GY I+ A++ I A +L GSIGV Sbjct: 362 GGGSAFASEVIRQEISNLKAKGIPIYISMGSLAASGGYWIATAADEIWATPATLTGSIGV 421 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 YP + LD LG+ + ++ + ++ A +++Q VD+ Y F+ +V+ Sbjct: 422 WGLYPNLTDSLDALGIHTDGIGTTELADVFRTDRPLSNAAEKVLQSGVDNIYSRFLSIVA 481 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++R I ++ ++ GR+W+G AK++GL+D +GG +V Sbjct: 482 DARGISVEQVNEIAQGRVWSGTTAKELGLVDELGGLNDV 520 >gi|74311916|ref|YP_310335.1| protease 4 [Shigella sonnei Ss046] gi|73855393|gb|AAZ88100.1| protease IV, a signal peptide peptidase [Shigella sonnei Ss046] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|26248024|ref|NP_754064.1| protease 4 [Escherichia coli CFT073] gi|91210983|ref|YP_540969.1| protease 4 [Escherichia coli UTI89] gi|110641888|ref|YP_669618.1| protease 4 [Escherichia coli 536] gi|215486982|ref|YP_002329413.1| protease 4 [Escherichia coli O127:H6 str. E2348/69] gi|218699668|ref|YP_002407297.1| protease 4 [Escherichia coli IAI39] gi|300938898|ref|ZP_07153600.1| signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300975717|ref|ZP_07173137.1| signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|300994367|ref|ZP_07180872.1| signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|301050891|ref|ZP_07197742.1| signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|312966966|ref|ZP_07781184.1| signal peptide peptidase SppA, 67K type [Escherichia coli 2362-75] gi|331657804|ref|ZP_08358766.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA206] gi|26108427|gb|AAN80629.1|AE016761_204 Protease IV [Escherichia coli CFT073] gi|91072557|gb|ABE07438.1| protease IV, a signal peptide peptidase [Escherichia coli UTI89] gi|110343480|gb|ABG69717.1| protease IV [Escherichia coli 536] gi|215265054|emb|CAS09441.1| protease IV (signal peptide peptidase) [Escherichia coli O127:H6 str. E2348/69] gi|218369654|emb|CAR17423.1| protease IV (signal peptide peptidase) [Escherichia coli IAI39] gi|294489545|gb|ADE88301.1| protease 4 [Escherichia coli IHE3034] gi|300297410|gb|EFJ53795.1| signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|300308679|gb|EFJ63199.1| signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|300406213|gb|EFJ89751.1| signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|300456158|gb|EFK19651.1| signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|307553787|gb|ADN46562.1| protease IV [Escherichia coli ABU 83972] gi|307626750|gb|ADN71054.1| protease 4 [Escherichia coli UM146] gi|312288430|gb|EFR16332.1| signal peptide peptidase SppA, 67K type [Escherichia coli 2362-75] gi|315290471|gb|EFU49846.1| signal peptide peptidase SppA [Escherichia coli MS 153-1] gi|315299847|gb|EFU59087.1| signal peptide peptidase SppA [Escherichia coli MS 16-3] gi|324007104|gb|EGB76323.1| signal peptide peptidase SppA [Escherichia coli MS 57-2] gi|324011509|gb|EGB80728.1| signal peptide peptidase SppA [Escherichia coli MS 60-1] gi|331056052|gb|EGI28061.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA206] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|218689707|ref|YP_002397919.1| protease 4 [Escherichia coli ED1a] gi|218427271|emb|CAR08161.2| protease IV (signal peptide peptidase) [Escherichia coli ED1a] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|332343487|gb|AEE56821.1| signal peptide peptidase SppA [Escherichia coli UMNK88] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLFPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAPGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|188493917|ref|ZP_03001187.1| signal peptide peptidase SppA, 67K type [Escherichia coli 53638] gi|188489116|gb|EDU64219.1| signal peptide peptidase SppA, 67K type [Escherichia coli 53638] Length = 618 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDNGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|331668455|ref|ZP_08369303.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA271] gi|331063649|gb|EGI35560.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA271] Length = 622 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ V+ +R IP + ++ GA+ VGL G Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQ--------VFPGAQGLLVGLTKTGG 274 >gi|170683467|ref|YP_001743483.1| protease 4 [Escherichia coli SMS-3-5] gi|170521185|gb|ACB19363.1| protease 4 [Escherichia coli SMS-3-5] Length = 622 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|209695598|ref|YP_002263527.1| protease IV (endopeptidase IV) [Aliivibrio salmonicida LFI1238] gi|208009550|emb|CAQ79842.1| protease IV (endopeptidase IV) [Aliivibrio salmonicida LFI1238] Length = 617 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD+ A+++ + SPGGSA+A E I + ++ KPV+ + +AAS GY IS +++ I Sbjct: 362 DDNVKAVVLRVDSPGGSAFASEIIRNEVDALQEAGKPVVISMSSVAASGGYWISASADKI 421 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A T++ GSIG+ + L+K+G+ + +SP ++ Q+MQ Sbjct: 422 IAQPTTITGSIGIFGILTTFEKGLEKMGIHSDGISTSPFNG-IGLTRPLDKDVAQVMQLG 480 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ Y+ F++LVS+ R++ D ++ GR+WTG +A + GLID +G ++ Q+ Sbjct: 481 IEHGYYRFIKLVSDHRDMSLDAVDNVAQGRVWTGKDALEHGLIDQLGDFDDAVQA 535 >gi|193065780|ref|ZP_03046843.1| protease 4 [Escherichia coli E22] gi|192926552|gb|EDV81183.1| protease 4 [Escherichia coli E22] gi|320197951|gb|EFW72559.1| Protease IV [Escherichia coli EC4100B] Length = 622 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|300924815|ref|ZP_07140755.1| signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|301327503|ref|ZP_07220736.1| signal peptide peptidase SppA [Escherichia coli MS 78-1] gi|309793539|ref|ZP_07687966.1| signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|331653170|ref|ZP_08354175.1| signal peptide peptidase SppA, 67K type [Escherichia coli M718] gi|300419022|gb|EFK02333.1| signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|300845934|gb|EFK73694.1| signal peptide peptidase SppA [Escherichia coli MS 78-1] gi|308123126|gb|EFO60388.1| signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|323378358|gb|ADX50626.1| signal peptide peptidase SppA, 67K type [Escherichia coli KO11] gi|331049268|gb|EGI21340.1| signal peptide peptidase SppA, 67K type [Escherichia coli M718] Length = 666 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|172037525|ref|YP_001804026.1| protease IV, 67K long form [Cyanothece sp. ATCC 51142] gi|171698979|gb|ACB51960.1| protease IV, 67K long form [Cyanothece sp. ATCC 51142] Length = 597 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 24/237 (10%) Query: 56 RIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 RI R RD+ A+++ ++SPGGSA A + I R IQ ++ KPVI + +AAS GY I Sbjct: 337 RILRKIRDNEQVKAVVIRINSPGGSATASDIILREIQLIQETKPVIISMGNVAASGGYWI 396 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFSEVN 171 + I A ++ GSIGV ++ + G++ +K+ K + + P +E Sbjct: 397 ATGGEHIFAQPNTITGSIGVFGVLFNIQEIANNNGITWDVVKTGKFADLGTATRPKTE-- 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + Q V+ Y F+ V++SR++ +K + ++ GR+W+G AKK+GL+D GG Sbjct: 455 -QELAIYQKSVNRVYDLFLEKVAKSRDLSKEKVVNIAQGRVWSGETAKKIGLVDSFGG-- 511 Query: 232 EVWQSLYALGVDQSIRKI---KDWNP---PKNYWFCDLKNLSISSLLEDTIPLMKQT 282 +D ++ K KDW P + F + L I L++ I + T Sbjct: 512 ------LGAAIDYAVEKTELGKDWQVEEYPTSQGFAE---LFIKKTLDEDIKITTNT 559 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 109/217 (50%), Gaps = 11/217 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSP 76 +V+ F S+ ++D P V I E S ++I+ IE+ S+DD A+ + S+ Sbjct: 50 SVLVFDLSTEIKDREPLVNIGDILSGKESSVLTLSQVIKNIEKASKDDRIKAIFLDGSNA 109 Query: 77 G-GSAYAGEAIFRA--IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 GS YA + R I+ ++ K +I ++ YL S A +IV L+ G Sbjct: 110 SSGSGYANFSEIRQALIEFKESGKKIIAYDVTISEQEYYLTSLADTLIVNP-MGLMEFNG 168 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 + + ++ L+K G+ ++ V+ K+ EP ++++P+ Q ++ ++ + ++ F++ Sbjct: 169 IGTEPLFLTGALNKYGIGVQVVRVGEYKSGVEPYTRTQLSPENRQQLEVLLGNIWNNFLQ 228 Query: 192 LVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVV 227 V ++R I + ++D + + EAK++ L+D V Sbjct: 229 DVGKTRQIKVNNLQSIADTQGLLYPQEAKELNLVDQV 265 >gi|299067011|emb|CBJ38206.1| Peptidase S49 [Ralstonia solanacearum CMR15] Length = 378 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVT-LTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 +I R+V L ++ L ++ S+ + H A + + G+I + + ++ Sbjct: 92 RIFFRFVTLGIIGGLLYLFASFEGETVSSGRHTALVTLDGEIAANTNASADNINASLDAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKYKDIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGTNKGMLDPFSPVAPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTGA+A +GL D +GG + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGAKAVDLGLADGIGGTDFVARNV 331 >gi|309790773|ref|ZP_07685320.1| signal peptide peptidase SppA, 36K type [Oscillochloris trichoides DG6] gi|308227192|gb|EFO80873.1| signal peptide peptidase SppA, 36K type [Oscillochloris trichoides DG6] Length = 342 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 1/183 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ +I++ ++D A+++ + SPGG A I + K++ K ++ + AAS Sbjct: 98 NDILSQIKQAAKDPLVRAVVLRVDSPGGGVVASSEIHAELVKLREAGKTLVVSMGATAAS 157 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY IS + I A + + GS+GV+ D LG+ KS +K SP E Sbjct: 158 GGYYISAPAERIYANKDTFTGSLGVILSLTNYGEAFDNLGLKSYVYKSGNLKDIGSPLRE 217 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++Q VVD +Y FV ++ E R +P ++ L ++DGRI+TGA+A ++GL+D +G Sbjct: 218 PTAEENAVLQRVVDEAYQGFVDVIVEGRGLPRERVLEIADGRIYTGAQALELGLVDELGN 277 Query: 230 QEE 232 EE Sbjct: 278 LEE 280 >gi|86605621|ref|YP_474384.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] gi|86554163|gb|ABC99121.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] Length = 268 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 124/230 (53%), Gaps = 14/230 (6%) Query: 37 HVARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + RI + G I+ ++E + + + + A+++ + SPGG+ + I+ A+ +++ Sbjct: 13 QIGRIEVTGVIDGRTRERVLKALQEVEERQIPAVVLRIDSPGGTVADSQEIYNALSRLRE 72 Query: 96 RKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 RK ++ +AAS G I+ + IV+ ++ GSIGV+ + ++ LDK+G+S K Sbjct: 73 RKGTRIVASFGNIAASGGVYIAMGAEKIVSNPGTITGSIGVIIRGNNLERLLDKIGISFK 132 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K S E+ P+ ++Q+++D +Y FV+ V+ +R + + +DGRI+ Sbjct: 133 VIKSGPYKDILSFDRELTPEERNILQELIDITYGQFVQTVAAARRLSVNVVKTFADGRIF 192 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 +G +A +G++D +G +E+ L+A + P + FCDL Sbjct: 193 SGEQALHLGVVDRLGTEEDA--RLWAAELS---------GLPPDAKFCDL 231 >gi|186684393|ref|YP_001867589.1| signal peptide peptidase SppA, 36K type [Nostoc punctiforme PCC 73102] gi|186466845|gb|ACC82646.1| signal peptide peptidase SppA, 36K type [Nostoc punctiforme PCC 73102] Length = 273 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + + ++E ++ + + AL++ + SPGG+ + I+ A+++++ Sbjct: 12 QIARIEITGAIAGATRKRVLEALKTVE-EKKFPALLLRIDSPGGTVGDSQEIYSALKRLR 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + IV+ ++ GSIGV+ + ++ L+K+GVS + Sbjct: 71 EKIKIVASFGNISASGGVYIGMGAEHIVSNPGTITGSIGVILRGNNLERLLEKIGVSFQV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S ++ ++Q+++D+SY FV+ V++ R++ + +DGRI+T Sbjct: 131 IKSGPYKDILSFDRQLTQPEENILQELIDTSYQQFVQTVADGRSLTVEAVKSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A ++G++D +G +E+ Sbjct: 191 GQQALELGVVDRLGTEED 208 >gi|331091470|ref|ZP_08340308.1| hypothetical protein HMPREF9477_00951 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404026|gb|EGG83576.1| hypothetical protein HMPREF9477_00951 [Lachnospiraceae bacterium 2_1_46FAA] Length = 327 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 8/180 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF---RAIQKVKNRKPVITEVHEMAA 108 + +E I+R+ D S +++ + SPGG+ Y E ++ + QK NR PV T + AA Sbjct: 85 DTLEYIDRMKEDSSNKGILLRVDSPGGTVYESEELYLKLKEYQKETNR-PVWTYMEHYAA 143 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS S+ I A + GSIGV+ + +KLG+ S+ S K S Sbjct: 144 SGGYYISAPSDKIYANPNTTTGSIGVIISGFDMTGLYEKLGIRSYSITSGKNK----DMS 199 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++N + + Q +VD SY FV +V++ R + ++ L+DGRI++ +AK GL+D +G Sbjct: 200 QMNEEQTAIYQSIVDESYGRFVEIVADGRKMSEEEVRKLADGRIYSAKQAKANGLVDEIG 259 >gi|294673079|ref|YP_003573695.1| signal peptide peptidase SppA, 67K type [Prevotella ruminicola 23] gi|294473747|gb|ADE83136.1| signal peptide peptidase SppA, 67K type [Prevotella ruminicola 23] Length = 626 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 137/275 (49%), Gaps = 25/275 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ S V+ S + + G + + + + +++ DD A++ ++S GGSA A Sbjct: 338 VYYAYGSIVD--SEAMNMLEGGGHCIVGKTVADDLRKLADDDDVKAVVFRVNSGGGSAVA 395 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I A++ +K +KPV+ + AAS GY IS +N I+A T++ GSIG+ P V Sbjct: 396 SEYIRHAVKLIKAKKPVVVSMGGAAASGGYWISSPANYIIAEPTTITGSIGIFGLIPNVS 455 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + DKLG++ VK+ + + + ++ MQ+ ++ Y F+ +V+E R + Sbjct: 456 GLVTDKLGITFDGVKTHQFAGYETELVAGKDTQEIMRQMQNYINRGYQNFLNVVAEGRGL 515 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN----PP 255 ++ + GR+W ++A + L+D +G ++ + L K+++++ P Sbjct: 516 KPEQVNEIGQGRVWLASDALGIKLVDKLGSLDDAVKKAAELA------KLQEYHTAAYPA 569 Query: 256 KNYWFCDLKNL---------SISSLLEDT-IPLMK 280 + WF L N I LL D +PLM+ Sbjct: 570 EPGWFEKLMNKEPKGSYLDGQIRELLGDAYLPLMQ 604 >gi|317503476|ref|ZP_07961513.1| signal peptide peptidase SppA [Prevotella salivae DSM 15606] gi|315665427|gb|EFV05057.1| signal peptide peptidase SppA [Prevotella salivae DSM 15606] Length = 588 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 100/169 (59%), Gaps = 7/169 (4%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ ++S GGSAYA E I+ I +++ KPV+ + AAS GY +SC ++ I+A T+ Sbjct: 345 AVVIRVNSGGGSAYASEQIWHQISELRKVKPVVVSMGGAAASGGYYLSCNADWIIADPTT 404 Query: 128 LVGSIGVLFQYP-YVKPFLDKLGV---SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + GSIG+ +P + + KLG+ +K+ +++ A PF+ P+ + ++Q ++ Sbjct: 405 ITGSIGIFGLFPDWSELLTKKLGIKYAEVKTNRNAVFGASGHPFT---PEQLSLLQQNIN 461 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Y F + V+E R +P ++ GR+W G +A K+ LID +GG ++ Sbjct: 462 RGYMLFKKRVAEGRQLPMYLVEKIAQGRVWLGQDAIKLKLIDQLGGLDD 510 >gi|269965994|ref|ZP_06180086.1| Protease IV [Vibrio alginolyticus 40B] gi|269829390|gb|EEZ83632.1| Protease IV [Vibrio alginolyticus 40B] Length = 616 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 110/201 (54%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQE--------LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + R +R+D A+++ + SPGGSA+A E I Sbjct: 327 IAVVLASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKQAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP+ + + ++ A Q+ Q ++ Y F+ LV E+R++ ++ + Sbjct: 447 LGINTDGVGTSPLSGDGIT-TGLSEGASQVFQLGIEHGYKRFISLVGENRDMSLEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + GR+WTG +A GL+D +G Sbjct: 506 AQGRVWTGQDALSFGLVDQMG 526 >gi|300818408|ref|ZP_07098618.1| signal peptide peptidase SppA [Escherichia coli MS 107-1] gi|300529048|gb|EFK50110.1| signal peptide peptidase SppA [Escherichia coli MS 107-1] Length = 666 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ ++ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTIE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ V+ +R IP + ++ GA+ VGL G Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQ--------VFPGAQGLLVGLTKTGG 318 >gi|86606131|ref|YP_474894.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] gi|86554673|gb|ABC99631.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] Length = 346 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 22/223 (9%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGY 112 ++++ D + A+++ ++SPGG+ + + ++RA+ ++ KPVI + ++AAS GY Sbjct: 75 LDQLREAVEDRAVKAVLLRINSPGGAVGSSQELYRAVTALREAGKPVIAVMEDVAASGGY 134 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ A++ I A +L GSIGV+ LD G+ ++ K+ K SPF P Sbjct: 135 YVASAADKIYANPGTLTGSIGVIISGLNFGKLLDNYGIEPQTFKTGEYKDILSPFRAATP 194 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL---------------------VLSDGR 211 + +++Q++V+ + FVR V+ R DK L+DGR Sbjct: 195 QEQRLLQELVEDTLDQFVRDVARGRQRLPDKGAEKVLDAEMIARRQSLDEARVRQLADGR 254 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 I+TGA+A ++GL+D +GG E + L + D S+ +P Sbjct: 255 IFTGAQAVELGLVDALGGYAEAVEDLRRMTGDPSLSPATARDP 297 >gi|57237078|ref|YP_178090.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni RM1221] gi|57165882|gb|AAW34661.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni RM1221] gi|315057509|gb|ADT71838.1| protease IV (PspA) [Campylobacter jejuni subsp. jejuni S3] Length = 298 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 117/236 (49%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V + R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVVKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|285019630|ref|YP_003377341.1| periplasmic serine protease [Xanthomonas albilineans GPE PC73] gi|283474848|emb|CBA17347.1| putative periplasmic serine protease protein [Xanthomonas albilineans] Length = 630 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 10/207 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAYAG 83 D P VA + G+I ++ RI + DD+ A+++ + SPGG +A Sbjct: 329 DARPQVAVVVAAGEISAGEQPAGRIGGESTVQLLRQAREDDAVKAVVLRVDSPGGEVFAS 388 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + + AAS GY IS +++ I A +++ GSIG+ P + Sbjct: 389 EQIRREVVALKAAGKPVVVSMGDYAASGGYWISMSADRIYADPSTITGSIGIFGMVPNIA 448 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q ++ Y F V+++R + Sbjct: 449 RALDKIGVHTDGVGTTRYAGAFDISRPMDPIVGQLIQSAINKGYADFTGKVAQARGKSVE 508 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GR+W+GA+AK+ GL+D GG Sbjct: 509 AIDQVARGRVWSGAQAKERGLVDAFGG 535 >gi|254445955|ref|ZP_05059431.1| signal peptide peptidase SppA, 67K type [Verrucomicrobiae bacterium DG1235] gi|198260263|gb|EDY84571.1| signal peptide peptidase SppA, 67K type [Verrucomicrobiae bacterium DG1235] Length = 598 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 1/188 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 GQ+ S L I + +DD A+++ ++SPGGSA A E I R ++ K + PV+ + Sbjct: 331 GQVGGSG-LARVIRKARQDDRVKAIVLRVNSPGGSALASEVIQREMRLAKEKMPVVVSMG 389 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY IS ++ I A +L GSIGV+ + + GV+ +VK++ Sbjct: 390 SVAASGGYWISAYADRIFAQPNTLTGSIGVIGVFFNYEELAATHGVNFDTVKTTEHADLM 449 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + F + + ++Q VD Y F+ V+E R + + +++GRIW+GA+A ++GL+ Sbjct: 450 AQFRPKTEREMSLVQRHVDVIYDSFLAKVAEGRGLELEAVAEIAEGRIWSGADALELGLV 509 Query: 225 DVVGGQEE 232 D +GG E Sbjct: 510 DELGGLGE 517 >gi|124022325|ref|YP_001016632.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9303] gi|123962611|gb|ABM77367.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9303] Length = 270 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 133/255 (52%), Gaps = 5/255 (1%) Query: 38 VARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +A I+I G I + + +++ I+ + + AL++ + SPGG+ + I A+ +++ Sbjct: 13 IAHISIDGAISGATRERVLKAIKEVE-EREFPALLLRIDSPGGTVGDSQEIHAALLRLRE 71 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+ ++AS G + A+ IVA ++ GSIGV+ + + L+++G+ ++ Sbjct: 72 KGCHVVASFGNVSASGGVYVGVAAEKIVANPGTITGSIGVILRGNNLSKLLERIGIRFET 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS K SP + + Q++Q ++DSSY FV V+E R++ ++ +DGR+++ Sbjct: 132 VKSGTYKDILSPDRALTAEERQLLQSLIDSSYEQFVNAVAEGRHLSAEEVRNFADGRVFS 191 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 GA+A ++GLID +G +E + L +D++ + PK L + S L Sbjct: 192 GAQAHELGLIDELGDEEHARKLAAKLADLDEANTQTLKLGRPKKRLAGFLPGSKLLSKLA 251 Query: 274 DTIPLMKQTKVQGLW 288 + + L Q LW Sbjct: 252 ELLNLELGNSGQVLW 266 >gi|82776787|ref|YP_403136.1| protease 4 [Shigella dysenteriae Sd197] gi|81240935|gb|ABB61645.1| protease IV [Shigella dysenteriae Sd197] Length = 618 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVTKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNAVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|71892212|ref|YP_277945.1| protease IV [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796318|gb|AAZ41069.1| protease IV [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 625 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 19/209 (9%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I I G I D ++ +I D A+++ ++SPGGS A E I Sbjct: 335 IAIICINGPIVDGPDIPGSIGGDTIAHKIRSARFDPKIKAIVLRVNSPGGSVNASELIRL 394 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + V++ KPV+ + +AAS GY IS +N+I+A+ +++ GSIG+ + LD Sbjct: 395 ELIAVRDSGKPVVVSMGGIAASGGYWISTPANVIIASNSTITGSIGIFGIINTFEKSLDT 454 Query: 148 LGVSIKSVKSSPMK----AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +G+ V +SP+ P P +N MMQ V++SYH+F+ V+ESR + Sbjct: 455 IGIHSDGVNTSPISNISITTPLPTEYIN-----MMQLYVNTSYHYFINTVAESRCKTTED 509 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ G +W G +A K GLID +G ++ Sbjct: 510 IHKIAQGHVWLGYDAIKNGLIDNIGDLDD 538 >gi|71278898|ref|YP_269300.1| signal peptide peptidase SppA, 67K type [Colwellia psychrerythraea 34H] gi|71144638|gb|AAZ25111.1| signal peptide peptidase SppA, 67K type [Colwellia psychrerythraea 34H] Length = 637 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 111/207 (53%), Gaps = 11/207 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 E + VA I +G I D + + + + +D A+++ + SPGGSAYA Sbjct: 330 EKSHDKVAIIVAKGTILDGTQKPGTIGGDSTAKLLRKARNNDDVKAVVLRVDSPGGSAYA 389 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + ++ +K KPV+ + AAS GY IS ++ I AA +++ GSIG+ Sbjct: 390 SEIIRQEVELLKKAGKPVVASMGTYAASGGYWISAPADKIYAAPSTITGSIGIFGMMMTF 449 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L K+G+ V ++ + A SP + P + Q ++ Y F++LV+ +R++ Sbjct: 450 EDTLSKMGIYTDGVGTTDI-AGFSPTQALTPGMANLFQLSINRGYQEFIQLVATNRDMTL 508 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ ++ GR+W+G +AK++GL+D +G Sbjct: 509 EEVDAIAQGRVWSGKKAKELGLVDELG 535 >gi|306814983|ref|ZP_07449139.1| protease 4 [Escherichia coli NC101] gi|305851631|gb|EFM52084.1| protease 4 [Escherichia coli NC101] Length = 618 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+ +R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVANARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|54309756|ref|YP_130776.1| putative protease IV [Photobacterium profundum SS9] gi|46914194|emb|CAG20974.1| putative protease IV [Photobacterium profundum SS9] Length = 617 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 16/187 (8%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 DS + R R+ DD A+I+ + SPGGSA+A E I + +K KPV+ + +A Sbjct: 348 DSTAALLRDARL--DDDIKAVILRVDSPGGSAFASEVIRNEVDALKQAGKPVVVSMSSVA 405 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS +++ I+A T++ GSIG+ + L+K+GV V ++P F Sbjct: 406 ASGGYWISASADRIIAQPTTITGSIGIFAILTTFEKGLEKMGVYSDGVGTTP-------F 458 Query: 168 SEVN-----PKAV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 S V P+ V Q+ Q V+ Y F+ LVS+ RN+ ++ ++ GR+WTG +A ++ Sbjct: 459 SGVGVTRELPEGVGQVFQLGVEHGYKRFISLVSQYRNMSLEQADKIAQGRVWTGQDAMEL 518 Query: 222 GLIDVVG 228 GL+D +G Sbjct: 519 GLVDQLG 525 >gi|224418348|ref|ZP_03656354.1| protease IV (PspA) [Helicobacter canadensis MIT 98-5491] gi|313141879|ref|ZP_07804072.1| protease IV [Helicobacter canadensis MIT 98-5491] gi|313130910|gb|EFR48527.1| protease IV [Helicobacter canadensis MIT 98-5491] Length = 291 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 125/245 (51%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F++K K L + + V+ F SS + +VARI ++G I S +E + ++ Sbjct: 11 LDFIMKYFKA----LVFLLIVVLIFMPSSSENSSLANVARIDLKGMIIQSDSFLEELSKL 66 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + + +++ + SPGG+ I A+++++++KP++ AS YL ++ Sbjct: 67 ENNPNIKGVLLVIDSPGGTIPPSVEISEAVKRMRSKKPIVAYAQGSMASGSYLAGVWADR 126 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A + +LVGSIGV+ V +KLG+ + +K+ K + N +M++ Sbjct: 127 IIANKGALVGSIGVILNGVDVSELAEKLGIKTQILKAGIYKEAGTFMRPWNQAEEEMLKG 186 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ Y FV V +RN+ K + GR+++ + A K+GL+D + E ++L+ L Sbjct: 187 LIKEQYEMFVSEVVAARNLEITKEGEFAQGRVFSASNALKLGLVDSISSIYEAQKTLFEL 246 Query: 241 GVDQS 245 Q+ Sbjct: 247 AKIQN 251 >gi|269102166|ref|ZP_06154863.1| protease IV [Photobacterium damselae subsp. damselae CIP 102761] gi|268162064|gb|EEZ40560.1| protease IV [Photobacterium damselae subsp. damselae CIP 102761] Length = 617 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 17/222 (7%) Query: 22 VVYFSWSSHVED-NSPHVARIAI---RGQIEDSQE---------LIERIERISRDDSATA 68 + Y+ + + + D N P +IA+ G I D + E + D++ A Sbjct: 307 ISYYDYLASLTDINVPSKNKIAVVIASGAIIDGPQRPGTTGGDTTAELLREARFDNNVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + + K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 367 VILRVDSPGGSAFASELIRNEVDALQKAGKPVVVSMSSVAASGGYWISSSADKIIANPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV-QMMQDVVDSSY 186 + GSIG+ + L+KLG+ V ++P + P+ V ++ Q VD Y Sbjct: 427 ITGSIGIFAVMTTFEKGLNKLGIYNDGVGTTPFAG--VGVTRALPQGVGEIFQLGVDHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LVS+ R++ + ++ GR+WTGA+AK++GL+D +G Sbjct: 485 QRFIGLVSKYRHMSLAQVDKIAQGRVWTGADAKRLGLVDELG 526 >gi|189502064|ref|YP_001957781.1| hypothetical protein Aasi_0656 [Candidatus Amoebophilus asiaticus 5a2] gi|189497505|gb|ACE06052.1| hypothetical protein Aasi_0656 [Candidatus Amoebophilus asiaticus 5a2] Length = 513 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 17/231 (7%) Query: 18 VTLTVVYFSWSSHVEDNSPHVA----RIAI---RGQIEDSQE---------LIERIERIS 61 V + Y + ++ ++ PH RIA+ G I D + + + ++ Sbjct: 280 VATKINYIDFDTYHKNKQPHTKQHNNRIAVLIASGAIVDKEIGPNYITTSIFVRMLRKLR 339 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D A+++ ++SPGGSA A + I++ + + KP++ + ++AAS GY ++ + I Sbjct: 340 EDPDVKAIVLRINSPGGSALASDTIWKELMLTRACKPIVASMSDIAASGGYYLAAGCDYI 399 Query: 122 VAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 +A T++ GSIG+ Y V L +KLG+ VK+SP SP + ++Q Sbjct: 400 LAHPTTITGSIGIYGLYFDVHALLKNKLGIVGDVVKTSPSADIFSPVRPFSEHEKNIIQQ 459 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++S Y F+ V+ R + L++GR+W+G+ AK+ GL+D +GG E Sbjct: 460 HIESGYDNFLDKVATGRQMKKVDVARLAEGRVWSGSLAKEHGLVDQLGGLE 510 >gi|218708935|ref|YP_002416556.1| protease IV [Vibrio splendidus LGP32] gi|218321954|emb|CAV17952.1| Protease IV (Endopeptidase IV) [Vibrio splendidus LGP32] Length = 616 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 6/175 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEAIKQAGKPVVVSMSSLAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPK 173 ++ I+A T+L GSIG+ + L+ +GV V +SP + SE Sbjct: 415 MGADKILAQPTTLTGSIGIFSVITTFEKGLNDIGVYTDGVGTSPFSGLGITTGLSEGAKD 474 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 A QM +++ Y F+ LV E+R + D ++ GR+WTG +A + GL+D +G Sbjct: 475 AFQMG---IENGYRRFISLVGENRGMEVDAVDKIAQGRVWTGQDAIEKGLVDEIG 526 >gi|171463178|ref|YP_001797291.1| peptidase S49 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192716|gb|ACB43677.1| peptidase S49 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 313 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 9/239 (3%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERIS 61 ++ T V++S V L++ F H A + + G+I S ++ + Sbjct: 36 RVLTLLVIVS-VLLSIFDFHLPGKGMGVEKHTALVTLEGEISSSSMANAMDINSSLLSAF 94 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCAS 118 ++ + +++ ++SPGG I I +++ KP V ++ AS GY ++ AS Sbjct: 95 ENEHSVGVVLRINSPGGFPVQAGMINDEIHRLRKLYPSKPFYVVVEDICASGGYYVAVAS 154 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+ + SLVGSIGV+ + +DKLGV+ + + S K PFS+ NPK V+M+ Sbjct: 155 DQILVDKASLVGSIGVIMEGFGFTGLMDKLGVTRRMITSGSNKGMLDPFSKENPKQVEMV 214 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++D + F+ +V E R L GRIW G +A K+GL D G + V + + Sbjct: 215 KTMIDEIHQQFIAVVKEGRGDRLKDMPDLFSGRIWNGEQAVKIGLADGYGTVDTVARDI 273 >gi|291282945|ref|YP_003499763.1| Protease 4 [Escherichia coli O55:H7 str. CB9615] gi|209768384|gb|ACI82504.1| protease IV [Escherichia coli] gi|290762818|gb|ADD56779.1| Protease 4 [Escherichia coli O55:H7 str. CB9615] gi|320658432|gb|EFX26126.1| protease 4 [Escherichia coli O55:H7 str. USDA 5905] Length = 618 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ + + Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIKNGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|118474707|ref|YP_892637.1| signal peptide peptidase SppA, 36K type [Campylobacter fetus subsp. fetus 82-40] gi|118413933|gb|ABK82353.1| signal peptide peptidase SppA, 36K type [Campylobacter fetus subsp. fetus 82-40] Length = 287 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 6/240 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +FV + K+ +V L +V L +V S S + ++ I+++G I D E++ +I Sbjct: 15 FKFVNEYFKS-FVFLLIVILIIVN-SGKSEI----ANLTEISLKGAIIDESEILSQIYEA 68 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D +++++ SPGGS I AI+ + + KPVI AS Y S +N Sbjct: 69 KNDSFIKGVLLNIDSPGGSMAPSVQISDAIKDLASIKPVIAYASGTMASGSYYSSIWANK 128 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A S +GSIGV+ Q P V+ KLGVS +++K+ K + N +Q Sbjct: 129 IYANRGSFIGSIGVIVQSPNVEELAKKLGVSTQTIKAGKYKEAGTFIRGWNEDEKNELQS 188 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ SY F V+ +RN+ DK + ++ R++ +AK VGLID V EV L L Sbjct: 189 LVNRSYEMFYTDVAMARNLDIDKKDIWANARVFLAPDAKSVGLIDDVKSYFEVKSELELL 248 >gi|15802177|ref|NP_288199.1| protease 4 [Escherichia coli O157:H7 EDL933] gi|12515791|gb|AAG56752.1|AE005399_6 protease IV, a signal peptide peptidase [Escherichia coli O157:H7 str. EDL933] Length = 618 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVZ 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G +WTG +AK GL+D +G Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLG 527 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|261886139|ref|ZP_06010178.1| signal peptide peptidase SppA, 36K type [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 287 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 5/245 (2%) Query: 1 MEFVLKKIKTRYVML-----SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIE 55 ++F+ KI + + S V L +V + + ++ I+++G I D E++ Sbjct: 4 LKFIFSKIAAIFKFVNEYFKSFVFLLIVILIIVNSGKSEIANLTEISLKGAIIDESEILS 63 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +I D +++++ SPGGS I AI+ + + KPVI AS Y S Sbjct: 64 QIYEAKNDSFIKGVLLNIDSPGGSMAPSVQISDAIKDLASIKPVIAYASGTMASGSYYSS 123 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +N I A S +GSIGV+ Q P V+ KLGVS +++K+ K + N Sbjct: 124 IWANKIYANRGSFIGSIGVIVQSPNVEELAKKLGVSTQTIKAGKYKEAGTFIRGWNEDEK 183 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q +V+ SY F V+ +RN+ DK + ++ R++ +AK VGLID V EV Sbjct: 184 NELQSLVNRSYEMFYTDVAMARNLDIDKKDIWANARVFLAPDAKSVGLIDDVKSYFEVKS 243 Query: 236 SLYAL 240 L L Sbjct: 244 ELELL 248 >gi|145297988|ref|YP_001140829.1| signal peptide peptidase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850760|gb|ABO89081.1| signal peptide peptidase [Aeromonas salmonicida subsp. salmonicida A449] Length = 614 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 10/194 (5%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 RDD A+++ + SPGGSA+A E I + +K KPV+ + AAS GY IS ++ Sbjct: 359 RDDKVKAVVLRVDSPGGSAFAAEQIRAELLALKQAGKPVVISMGSYAASGGYWISADADK 418 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV-QMMQ 179 I A+ T+L GSIGV + + L + G+ V ++ + P+ V Q +Q Sbjct: 419 IFASPTTLTGSIGVFGMFATIDKALSQYGIHTDGVGTTDYVG--VGLTRALPEHVGQAIQ 476 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ +Y FV LVS+ R + + ++GR+WTG +AK +GL+D G QE+ A Sbjct: 477 LSVEDTYQRFVGLVSKGRGLSPQEAEKAAEGRVWTGQDAKALGLVDEFGNQED------A 530 Query: 240 LGVDQSIRKIKDWN 253 + ++ +K+W Sbjct: 531 IKAAATLANLKEWQ 544 >gi|323978052|gb|EGB73138.1| signal peptide peptidase SppA [Escherichia coli TW10509] Length = 622 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITKALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G +WTG +AK GL+D +G Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLG 531 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + + E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|309788853|ref|ZP_07683448.1| signal peptide peptidase SppA, 67K type [Shigella dysenteriae 1617] gi|308923124|gb|EFP68636.1| signal peptide peptidase SppA, 67K type [Shigella dysenteriae 1617] Length = 594 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 299 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 358 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 359 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 418 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 419 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 477 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 478 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVTKAAELAKVKQWH 522 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 75 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 134 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 135 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 194 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 195 DMSPAAREADSRWIGELWQNYLNAVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 254 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 255 NKLVDALASSAEIEKAL 271 >gi|223936754|ref|ZP_03628664.1| signal peptide peptidase SppA, 36K type [bacterium Ellin514] gi|223894605|gb|EEF61056.1| signal peptide peptidase SppA, 36K type [bacterium Ellin514] Length = 354 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 16/203 (7%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVIT 101 +G I + E++ R DD A+I+ ++SPGG A + I AI K + ++KPV+ Sbjct: 83 QGSIGMVSSIKEQLRRAKADDLVKAVILRVNSPGGEVLASDEIANAITKFRTESKKPVVV 142 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS GY +S + IVA E ++ GSIGV+ + LDK+GV + KS K Sbjct: 143 SMGSLAASGGYYVSAPCDWIVANELTITGSIGVIMHGFNYRSLLDKVGVRPEVYKSGKFK 202 Query: 162 ----AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY--DKTLVLS------- 208 SP EV P+ +M+Q ++D +++ F +V RN Y + LS Sbjct: 203 DMLSGTKSP-EEVLPEERKMVQALIDETFNKFKDVVRSGRNAAYKAHQGRKLSSDWEDYA 261 Query: 209 DGRIWTGAEAKKVGLIDVVGGQE 231 DGRI +G EA+K+G +D VG E Sbjct: 262 DGRILSGKEAEKLGFVDQVGDLE 284 >gi|237748404|ref|ZP_04578884.1| peptidase U7 family [Oxalobacter formigenes OXCC13] gi|229379766|gb|EEO29857.1| peptidase U7 family [Oxalobacter formigenes OXCC13] Length = 315 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 120/235 (51%), Gaps = 13/235 (5%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSP---HVARIAIRGQIEDS-----QELIERIERIS 61 T +++ V ++ S+SS ++ P H A + IRG I+ S +I+ +++ Sbjct: 35 TTIILVIFVIFSIKSLSFSS--KETVPVQKHTAMVEIRGTIDSSGNSSAANIIKALDKAY 92 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + AT +I+ ++SPGGS I+ R +++V KP+ V E+ AS GY ++ A+ Sbjct: 93 DEPLATGVILKINSPGGSPVQAGMIYDEIRRLREVHPDKPLYVVVEELCASGGYYVAAAA 152 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I + SLVGSIGV+ V + KLGV + + + K PFS P+ VQ Sbjct: 153 DKIFVDKASLVGSIGVMINGFGVTGLMQKLGVERRLLTAGEYKGFLDPFSPQTPQQVQYA 212 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q +++ + F+ +V + R + + G ++ G EA K+GL D +G E V Sbjct: 213 QSMLNQIHQQFIEVVRQGRGDRLKENREIYSGLVFLGPEAIKMGLADELGTVESV 267 >gi|304413097|ref|ZP_07394570.1| protease IV (signal peptide peptidase) [Candidatus Regiella insecticola LSR1] gi|304283940|gb|EFL92333.1| protease IV (signal peptide peptidase) [Candidatus Regiella insecticola LSR1] Length = 607 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 17/208 (8%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNII 121 D A+I+ ++SPGGSA A E I + ++ KP++ + MAAS GY +S +N I Sbjct: 359 DPKIKAVILRVNSPGGSASASEVIRAELVALRRANKPLVVSMGGMAASGGYWVSTPANYI 418 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A+ ++L GSIG+ + LD +GV V +SP+ A+ + + P+ QMM+ Sbjct: 419 IASPSTLTGSIGIFGVINTFENSLDNVGVHSDGVATSPL-ADVAITKALPPEFSQMMKMT 477 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ Y F+ LV+ +R + ++ GR+WTG++A++ GL+D +G Sbjct: 478 IEHGYQTFIELVATARKKTIAQMDEVAQGRVWTGSDAQQRGLVDQLG------------D 525 Query: 242 VDQSIRKIKDWNPPKNY---WFCDLKNL 266 D +++K+ + K Y WF + NL Sbjct: 526 FDDAVKKVAELAKLKQYTLQWFSEQPNL 553 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASA 110 E++E + + D++ T +++SL++ G+ + I +A+ + +N I + E + A Sbjct: 96 EIVETLRQAKSDNNITGIVLSLNNLAGADQPSLQYIGKALSEFRNSGKPIYAIGESYSQA 155 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ +N I A V G Y K LDKL VS + K+ P Sbjct: 156 QYYLASFANKIYLAPQGSVQLHGFSTNTLYYKSLLDKLKVSTHIFRVGTYKSAVEP 211 >gi|91223668|ref|ZP_01258933.1| protease IV [Vibrio alginolyticus 12G01] gi|91191754|gb|EAS78018.1| protease IV [Vibrio alginolyticus 12G01] Length = 616 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQE--------LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + R +R+D A+++ + SPGGSA+A E I Sbjct: 327 IAVVLASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKQAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q+ Q ++ Y F+ LV E+R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDGIT-TGLSEGASQVFQLGIEHGYKRFISLVGENRDMSLEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + GR+WTG +A GL+D +G Sbjct: 506 AQGRVWTGQDALSFGLVDQMG 526 >gi|332090582|gb|EGI95679.1| signal peptide peptidase SppA, 67K type [Shigella boydii 5216-82] Length = 618 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G +WTG +AK GL+D +G Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLG 527 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|209963904|ref|YP_002296819.1| signal peptide peptidase SppA, 67K type [Rhodospirillum centenum SW] gi|209957370|gb|ACI98006.1| signal peptide peptidase SppA, 67K type [Rhodospirillum centenum SW] Length = 595 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 7/171 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D S A++ ++SPGGSA E + RA+++ + + KPVI + ++AAS GY +S ++ I Sbjct: 338 DSSVKAILFRVNSPGGSAVGSEVVRRAVKRAREQGKPVIVSMGDLAASGGYWVSMDADRI 397 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSPFSEVNPKAVQMM 178 VA + GSIGVL D LGV+ +++ M P++ P + Sbjct: 398 VAQPGTFTGSIGVLGGKLVTSGLTDMLGVNYGMTSRGRNATMWTTQQPYT---PAELDRR 454 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++D Y F VS RN+P +K ++ GR+WTG +AK++GL+D +GG Sbjct: 455 AALLDDIYAQFTTGVSAGRNLPLEKVQEVAKGRVWTGRQAKEIGLVDALGG 505 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 27/203 (13%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ ++R +RD LI G+A G A + ++ R + + A Sbjct: 72 HDVVATLDRAARDPRVKGLIAR----AGTAEGGVATLQELRDAVERFRAAGKFALVHAET 127 Query: 111 ---------GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS--------IK 153 Y ++ A + I VG G+L + P ++ L+KL + K Sbjct: 128 FGEFSPGMQSYYLATAFDEIWLQPVGTVGITGILSERPLLRGTLEKLKIEPQIDKRYEYK 187 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + M+ EP+P +E +M + ++ Y V ++ R +P D D Sbjct: 188 TAAEQFMEREPTPANE------EMTESLIGDLYEQMVAGIAADRKLPIDAVNAAVDRAPL 241 Query: 214 TGAEAKKVGLIDVVGGQEEVWQS 236 EA ++ L+D +G +E+ ++ Sbjct: 242 LDKEALELKLVDRLGYYDELVET 264 >gi|83859154|ref|ZP_00952675.1| putative protease IV [Oceanicaulis alexandrii HTCC2633] gi|83852601|gb|EAP90454.1| putative protease IV [Oceanicaulis alexandrii HTCC2633] Length = 623 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 1/179 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYL 113 E I R DD A+++ + S GGSA+A E I ++ + K VI + +AAS GY Sbjct: 354 ELIRRARLDDDVRAIVLRIDSGGGSAFASELIREELEMARLEGKIVIASMGGVAASGGYW 413 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ ++ I A T++ GSIG+ P + L ++GV + + +PS F V + Sbjct: 414 IATPAHEIWAEPTTITGSIGIFGFIPTFEDSLAEIGVYEDGIALTETARQPSQFGGVTEE 473 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++Q +++ Y F+ +V+ESRN+ D+ ++ GRIWTG +A GL+D +GG +E Sbjct: 474 WDTILQSSIEAGYERFLSIVAESRNMTRDEVDAVAQGRIWTGQQAFDRGLVDQLGGYDE 532 >gi|183981078|ref|YP_001849369.1| protease IV, Ssp [Mycobacterium marinum M] gi|183174404|gb|ACC39514.1| protease iv, Ssp [Mycobacterium marinum M] Length = 600 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 104/178 (58%), Gaps = 9/178 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DD +A+++ + SPGGS A E I+R +Q+ ++R KPV+ + +AAS GY +S Sbjct: 344 LREVAADDEVSAIVLRVDSPGGSVTASETIWREVQRARDRGKPVVASMGSIAASGGYYVS 403 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP----SPFSEVN 171 ++ IVA ++ GSIGV+ V+ D+LGV ++++++ A+ +PF++ Sbjct: 404 MGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSETLRTN-ANADAWSIDAPFTDEQ 462 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D+ Y FV V+ RN+ + ++ GR+WTGA+A + GL+D +GG Sbjct: 463 RARREAEADMF---YTDFVERVARGRNLRTEDVDAVARGRVWTGADALERGLVDELGG 517 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 10/196 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + + R + D LI + P A + + AI KP + + Sbjct: 69 RDAVAALHRGAEDPRVAGLIARVQLPPAPIGAVQELREAIAAFSAVKPSVAWAETYPGTL 128 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A I + G IG +++ LDK+G+ + V K+ F+E Sbjct: 129 SYYLATAFREIWMQPSGEAGLIGFASNAMFLRDALDKVGIEAQFVARGEYKSAADLFTED 188 Query: 170 ----VNPKAV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 N +AV +M++ + D + V++SR I L+D EA GLI Sbjct: 189 GYTDANREAVTRMLESLQDQVWQ----AVAQSRQIDAGVLDELADKAPLLRDEALSSGLI 244 Query: 225 DVVGGQEEVWQSLYAL 240 D +G ++E + + L Sbjct: 245 DRIGFRDEAYARIAEL 260 >gi|299139693|ref|ZP_07032866.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX8] gi|298598317|gb|EFI54482.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX8] Length = 351 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +S +A I + G I D+ ++ +++++ DD+ A+I+ + SPGG A A + I+ + ++ Sbjct: 94 DSDSIAVIDVSGVILDADKVDKQLQKFGDDDNVKAIILHIDSPGGGAAASQEIYHEVLRI 153 Query: 94 KN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + K ++ + + AS Y I+ A + I A S+VGS+GV+ ++ L + Sbjct: 154 RQEKHKKIVASIESVGASGAYYIASACDKIYANPASVVGSVGVIMEWTNYGDLLRWAKMK 213 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + +K P ++ PK Q +VD+ Y F+ V+ R++ DK L+ G+ Sbjct: 214 NVVIHAGELKDAGDPTRDLTPKEEAYFQSLVDNMYVQFIHDVATGRHVGDDKIKPLATGQ 273 Query: 212 IWTGAEAKKVGLIDVVGG 229 +WTG +A +GLID GG Sbjct: 274 VWTGEQALPLGLIDAQGG 291 >gi|15831726|ref|NP_310499.1| protease 4 [Escherichia coli O157:H7 str. Sakai] gi|168749412|ref|ZP_02774434.1| protease 4 [Escherichia coli O157:H7 str. EC4113] gi|168762162|ref|ZP_02787169.1| protease 4 [Escherichia coli O157:H7 str. EC4501] gi|195937452|ref|ZP_03082834.1| protease 4 [Escherichia coli O157:H7 str. EC4024] gi|208810557|ref|ZP_03252433.1| protease 4 [Escherichia coli O157:H7 str. EC4206] gi|209400845|ref|YP_002270837.1| protease 4 [Escherichia coli O157:H7 str. EC4115] gi|254793384|ref|YP_003078221.1| protease 4 [Escherichia coli O157:H7 str. TW14359] gi|261227739|ref|ZP_05942020.1| protease 4 [Escherichia coli O157:H7 str. FRIK2000] gi|261258095|ref|ZP_05950628.1| protease 4 [Escherichia coli O157:H7 str. FRIK966] gi|13361939|dbj|BAB35895.1| protease IV [Escherichia coli O157:H7 str. Sakai] gi|188016236|gb|EDU54358.1| protease 4 [Escherichia coli O157:H7 str. EC4113] gi|189367493|gb|EDU85909.1| protease 4 [Escherichia coli O157:H7 str. EC4501] gi|208725073|gb|EDZ74780.1| protease 4 [Escherichia coli O157:H7 str. EC4206] gi|209162245|gb|ACI39678.1| protease 4 [Escherichia coli O157:H7 str. EC4115] gi|209768380|gb|ACI82502.1| protease IV [Escherichia coli] gi|209768382|gb|ACI82503.1| protease IV [Escherichia coli] gi|209768386|gb|ACI82505.1| protease IV [Escherichia coli] gi|254592784|gb|ACT72145.1| protease IV (signal peptide peptidase) [Escherichia coli O157:H7 str. TW14359] gi|320188454|gb|EFW63116.1| Protease IV [Escherichia coli O157:H7 str. EC1212] gi|326342134|gb|EGD65915.1| Protease IV [Escherichia coli O157:H7 str. 1044] Length = 618 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G +WTG +AK GL+D +G Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLG 527 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|262393686|ref|YP_003285540.1| protease IV [Vibrio sp. Ex25] gi|262337280|gb|ACY51075.1| protease IV [Vibrio sp. Ex25] Length = 616 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQE--------LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + R +R+D A+++ + SPGGSA+A E I Sbjct: 327 IAVVLASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKQAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q+ Q ++ Y F+ LV E+R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDGIT-TGLSDGASQVFQLGIEHGYKRFISLVGENRDMSLEEVDNV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + GR+WTG +A GL+D +G Sbjct: 506 AQGRVWTGQDALSFGLVDQMG 526 >gi|238786163|ref|ZP_04630115.1| Protease 4 [Yersinia bercovieri ATCC 43970] gi|238712932|gb|EEQ04992.1| Protease 4 [Yersinia bercovieri ATCC 43970] Length = 281 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 123/236 (52%), Gaps = 13/236 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 15 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRSELSALRAANKPLVVSMGGMAASGG 74 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L+ +GV V +SP+ A+ S + Sbjct: 75 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLESIGVHTDGVATSPL-ADISITKNLP 133 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 134 PEFSQMMQINIENGYKTFIDLVATSRHKTVEQVDQIAQGHVWIGFDAKSNGLVDQLGDFD 193 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQ 285 + + + L K+K W + WF D +LS I + ++ M T +Q Sbjct: 194 DAVKKVAELA------KLKTW---QLNWFIDEPSLSDLIFGQMSASVQAMLPTAIQ 240 >gi|332297292|ref|YP_004439214.1| signal peptide peptidase SppA, 36K type [Treponema brennaborense DSM 12168] gi|332180395|gb|AEE16083.1| signal peptide peptidase SppA, 36K type [Treponema brennaborense DSM 12168] Length = 370 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 107/200 (53%), Gaps = 9/200 (4%) Query: 37 HVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 ++A ++I G IE D Q L++ I ++ D +++ + SPGG Y + ++ + Sbjct: 90 YLAVVSIEGVIEEKNDTYDQQWLLDTIGALAADSKNVGILLYIDSPGGGVYQSDEVYLEL 149 Query: 91 QKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDK 147 K K PV+ + +AAS GY I+CA++ ++A +L GSIGV+ Q + +DK Sbjct: 150 VKYKETTGNPVLAYLGPLAASGGYYIACAADYLIANRNTLTGSIGVISGQSVDLSALMDK 209 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ + + + K S + + +MQ + D Y F +V+ESR + ++ L Sbjct: 210 YGIKMNTFTAGRNKDMLSINRPLTEEQRSIMQSIADECYDQFTGIVAESRGLDIEQVTAL 269 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 +DGR++T A+A + GLID + Sbjct: 270 ADGRVYTAAQALEHGLIDEI 289 >gi|87303026|ref|ZP_01085830.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 5701] gi|87282522|gb|EAQ74481.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 5701] Length = 270 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 133/259 (51%), Gaps = 4/259 (1%) Query: 38 VARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARIAI G I ++E + + R + AL++ + SPGG+ + I AI +++++ Sbjct: 13 MARIAIEGAISGPTRERVVKALRQVEEREFPALLLRIDSPGGTVGDSQEIHAAIGRLRSK 72 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+ ++AS G + A+ IVA ++ GSIGV+ + + L+++G+S ++V Sbjct: 73 GCRVVASFGNISASGGVYVGVAAEKIVANPGTITGSIGVILRGNNISKLLERIGISFETV 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS K SP + ++Q ++DSSY FV V+ R + + +DGR+++G Sbjct: 133 KSGLYKDILSPDRALTADERALLQGLIDSSYSQFVEAVATGRGLNESEVRGFADGRVFSG 192 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 A+A +GLID +G +E + L G+D++ + + P + L++ L+ Sbjct: 193 AQAIALGLIDELGDEEHARRLAARLAGLDETKTQPVIFGKPPKRLAGLIPGLNLLGGLQQ 252 Query: 275 TIPLMKQTKVQGLWAVWNP 293 + + Q LW +W P Sbjct: 253 ALSMELAWCGQPLW-LWRP 270 >gi|284032927|ref|YP_003382858.1| signal peptide peptidase SppA, 36K type [Kribbella flavida DSM 17836] gi|283812220|gb|ADB34059.1| signal peptide peptidase SppA, 36K type [Kribbella flavida DSM 17836] Length = 552 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 104/187 (55%), Gaps = 1/187 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S + + ++ DD A+++ + SPGGS A +AI + ++++ KPVI + +AA Sbjct: 293 SDTITAALRAVAADDKVKAVVLRIDSPGGSYVASDAIRHEVLRLRSTGKPVIASMGSVAA 352 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ++ ++++VA ++ GSIGVL V+ L ++G++ ++V S Sbjct: 353 SGGYFVAMPADVVVAQPGTITGSIGVLSGKGVVRDALGRIGITQQAVSEGTNARMYSAQE 412 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E +P+ + +++ +D Y FV +E R + D+ L+ GR+WTGA+A + L+D +G Sbjct: 413 EFSPQQWERLEETLDRIYADFVAKAAEDRGLGVDELEALARGRVWTGADAHRHQLVDELG 472 Query: 229 GQEEVWQ 235 G E Q Sbjct: 473 GFEHALQ 479 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/228 (20%), Positives = 92/228 (40%), Gaps = 8/228 (3%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQ-IEDSQELIERIERISRDDSATALIVSLSSP 76 +T V+ + V + P A+R + + +EL+ + + + D+ L+ + P Sbjct: 1 MTGIVLELDLTRGVLETPPGSPLAAVRARHLPTVRELVVGLRKAAEDEQVVGLVAHVGGP 60 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG-----YLISCASNIIVAAETSLVGS 131 S + + A+ + E AG Y ++ A + I + +G Sbjct: 61 ALSLAQVQELRTAVVGFRAAGKRAVAWSESFGEAGGGTVPYYLATAFDEIWVQPSGELGI 120 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWF 189 GV Q +V+ LDK GV + K K F+E + A +M + +S+Y Sbjct: 121 TGVSVQATFVRGALDKAGVIPQFGKRREYKTAVDTFTEKEMTGPAREMAARLAESAYEQL 180 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V ++ R + ++ L D ++ GL+D +G + +V+ L Sbjct: 181 VEGIAGERELSVERVRELVDNAPLAAEAGREAGLVDRLGYRSDVYDEL 228 >gi|284921686|emb|CBG34758.1| protease IV [Escherichia coli 042] Length = 618 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + ++ KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARSAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + +A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITKALPQEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQRLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|170768773|ref|ZP_02903226.1| protease 4 [Escherichia albertii TW07627] gi|170122321|gb|EDS91252.1| protease 4 [Escherichia albertii TW07627] Length = 618 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRSELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+ +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R + Sbjct: 443 NSLNSIGVHTDGVSTSPL-ADISITKALPPEAQQMMQLSIENGYKRFITLVADARKSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKLKQWH 546 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + + E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L DG TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLDGLTKTGGDTAKYALD 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|296102810|ref|YP_003612956.1| protease 4 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057269|gb|ADF62007.1| protease 4 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 618 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 116/232 (50%), Gaps = 17/232 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYA 82 +++ VA + G I D QE +I D A+++ ++SPGGS A Sbjct: 322 DESGDSVAVVFANGAIMDGQETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVSA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V Sbjct: 382 SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVINTV 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD LGV V +SP+ A+ S + P+ +MMQ +++ Y F+ LV++SR Sbjct: 442 ENSLDYLGVHTDGVATSPL-ADVSVTKSLPPEVSEMMQLSIENGYKRFITLVADSRKKTP 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ + L K+K W+ Sbjct: 501 QQIDEIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELA------KLKQWH 546 >gi|187776034|ref|ZP_02992803.1| protease 4 [Escherichia coli O157:H7 str. EC4196] gi|189010434|ref|ZP_03006318.1| protease 4 [Escherichia coli O157:H7 str. EC4076] gi|189402336|ref|ZP_03006680.1| protease 4 [Escherichia coli O157:H7 str. EC4401] gi|189403499|ref|ZP_03007105.1| protease 4 [Escherichia coli O157:H7 str. EC4486] gi|189405098|ref|ZP_03007686.1| protease 4 [Escherichia coli O157:H7 str. EC869] gi|189406058|ref|ZP_03008051.1| protease 4 [Escherichia coli O157:H7 str. EC508] gi|208816614|ref|ZP_03257734.1| protease 4 [Escherichia coli O157:H7 str. EC4045] gi|208818606|ref|ZP_03258926.1| protease 4 [Escherichia coli O157:H7 str. EC4042] gi|217328805|ref|ZP_03444886.1| protease 4 [Escherichia coli O157:H7 str. TW14588] gi|187769467|gb|EDU33311.1| protease 4 [Escherichia coli O157:H7 str. EC4196] gi|189000232|gb|EDU69218.1| protease 4 [Escherichia coli O157:H7 str. EC4076] gi|189356179|gb|EDU74598.1| protease 4 [Escherichia coli O157:H7 str. EC4401] gi|189360401|gb|EDU78820.1| protease 4 [Escherichia coli O157:H7 str. EC4486] gi|189372021|gb|EDU90437.1| protease 4 [Escherichia coli O157:H7 str. EC869] gi|189376761|gb|EDU95177.1| protease 4 [Escherichia coli O157:H7 str. EC508] gi|208730957|gb|EDZ79646.1| protease 4 [Escherichia coli O157:H7 str. EC4045] gi|208738729|gb|EDZ86411.1| protease 4 [Escherichia coli O157:H7 str. EC4042] gi|217318152|gb|EEC26579.1| protease 4 [Escherichia coli O157:H7 str. TW14588] gi|326343685|gb|EGD67447.1| Protease IV [Escherichia coli O157:H7 str. 1125] Length = 622 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G +WTG +AK GL+D +G Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLG 531 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|186681712|ref|YP_001864908.1| signal peptide peptidase SppA, 67K type [Nostoc punctiforme PCC 73102] gi|186464164|gb|ACC79965.1| signal peptide peptidase SppA, 67K type [Nostoc punctiforme PCC 73102] Length = 611 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 95/171 (55%) Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++ +D A+++ ++SPGGSA A E + R ++ + KPV+ + ++AAS GY I+ S Sbjct: 349 KLRQDKDVKAVVLRINSPGGSATAAEVMQREVKLTREVKPVVVSMGDVAASGGYWIASDS 408 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I A ++ GSIGV + G++ SVK+ + +P+ + + Sbjct: 409 NRIFAEPNTITGSIGVFGLLFNGEKLASDNGITWDSVKTGTYADSQTVSRPKSPQELALY 468 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 Q V+ Y+ F+ VS+ R +P K ++ GR+W+G AK++GL+D +GG Sbjct: 469 QRSVNRIYNMFLNKVSQGRKLPEQKVAEIAQGRVWSGVAAKEIGLVDEIGG 519 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 19/247 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARI---AIRGQIEDSQ----ELIERIERISRDDSATALIV-- 71 +V+ F S + D+ P + I G ++D + +++E +E+ RD + + Sbjct: 51 SVLVFDLSMKITDSEPSSDELFQNTISG-VDDERMALRKVVETLEKARRDPRIVGIYLDS 109 Query: 72 -SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 S S G YA + I +A+++ + I + Y +S ++ IV ++ Sbjct: 110 TSASQAGNVGYASLKEIRKALEEFRASGKKIVAYGSDWSEKEYYLSSVADSIVLNPLGMM 169 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYH 187 G+ Q ++ L K G+ ++ V+ K PF +++P+ + Q ++D + Sbjct: 170 EVNGLSSQPMFLAGALQKYGIGVQVVRVGKFKGAVEPFILKKLSPENREQTQKLLDDVWG 229 Query: 188 WFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGV---- 242 + V SR I ++ ++D + + +AK GL+D V +EV L L Sbjct: 230 EWRTTVGASRKIEPNQLQAIADSQAVLEATQAKTSGLVDRVAYPDEVVSDLKKLTNSDKD 289 Query: 243 DQSIRKI 249 D++ R+I Sbjct: 290 DKTFRQI 296 >gi|52425162|ref|YP_088299.1| SppA protein [Mannheimia succiniciproducens MBEL55E] gi|52307214|gb|AAU37714.1| SppA protein [Mannheimia succiniciproducens MBEL55E] Length = 608 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 110/201 (54%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I I G I D + + + + + +D + A+++ ++SPGGSA+A E I + Sbjct: 311 IAVINIEGTIVDGETNEQGVGGDSIAQLLRKAYKDKNVKAVVLRVNSPGGSAFASEVIRQ 370 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++ KPV+ + MAAS GY IS ++ IVA + +L GSIG+ P ++ + K Sbjct: 371 EAENLQTAGKPVVVSMGAMAASGGYWISSTADYIVADKNTLTGSIGIFAVLPTLENTIKK 430 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+S V +S + PS FS + + +Q ++ Y F+ +VS+ R++ + + Sbjct: 431 AGISADGVTTSAL-VSPSGFSPLTAELKDSLQLQIEHGYERFLSVVSKGRSLTKQQVDNV 489 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + GR+W G +A K+ L+D +G Sbjct: 490 AQGRVWLGEDAYKMKLVDELG 510 >gi|33866416|ref|NP_897975.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 8102] gi|33633194|emb|CAE08399.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 8102] Length = 270 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 118/223 (52%), Gaps = 2/223 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ + I A+ +++ + V+ ++AS G I A+ IVA Sbjct: 44 ALLLRIDSPGGTVGDSQEIHAALLRLREKGCRVVASFGNISASGGVYIGVAAESIVANPG 103 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ + + +++G+ +VKS K SP ++P+ ++Q+++DSSY Sbjct: 104 TITGSIGVILRGNDLSKVFERIGIRFDTVKSGVYKDILSPDRPLSPEERALLQELIDSSY 163 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQS 245 FVR+V+E R++ + +DGR+++G +AK +GL+D +G ++ + L +D++ Sbjct: 164 GQFVRVVAEGRSLTEETVRGFADGRVFSGEQAKTLGLVDELGDEDHARRLAARLADLDET 223 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + P+ L + +LL+ + L Q LW Sbjct: 224 TTRPVTLGKPRKKLMNLLPGSQLIALLQQRLSLELMGSGQVLW 266 >gi|315929657|gb|EFV08835.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 305] Length = 281 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 109/213 (51%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S++ N ++ RI ++G+I DS ++E+I D + ++ + SPGG+ + Sbjct: 38 SANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELA 97 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+ +K +KPV+ AS YL +N I+A S +GSIGV+ Q + +K Sbjct: 98 LAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANK 157 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ +++++ K+ + N +Q ++D SY F V++ R + +K Sbjct: 158 LGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQW 217 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ R++ A+AK++GLID + E + L L Sbjct: 218 ANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|90410825|ref|ZP_01218840.1| putative protease IV [Photobacterium profundum 3TCK] gi|90328456|gb|EAS44754.1| putative protease IV [Photobacterium profundum 3TCK] Length = 617 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 16/187 (8%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 DS + R R+ DD A+I+ + SPGGSA+A E I + +K KPV+ + +A Sbjct: 348 DSTAALLRDARL--DDDIKAVILRVDSPGGSAFASEIIRNEVDALKQAGKPVVVSMSSVA 405 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS +++ I+A T++ GSIG+ + L+K+GV V + +PF Sbjct: 406 ASGGYWISASADRIIAQPTTITGSIGIFAILTTFEKGLEKMGVYSDGVGT-------TPF 458 Query: 168 SEVN-----PKAV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 S V P+ V Q+ Q V+ Y F+ LVS+ RN+ ++ ++ GR+WTG +A ++ Sbjct: 459 SGVGVTRELPEGVGQVFQLGVEHGYKRFIGLVSQYRNMSLEQADKIAQGRVWTGQDAMEL 518 Query: 222 GLIDVVG 228 GL+D +G Sbjct: 519 GLVDQLG 525 >gi|33519890|ref|NP_878722.1| protease IV, a signal peptide peptidase [Candidatus Blochmannia floridanus] gi|33504235|emb|CAD83498.1| protease IV, a signal peptide peptidase [Candidatus Blochmannia floridanus] Length = 625 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 26/220 (11%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSS 75 S+ + ++ +A I I+G I D + +I D ++I+ ++S Sbjct: 319 SNKQQHDNNQIAIICIQGTIIDGVNSNNISGSVGGDTIAYQIRNARFDPKIQSIILRINS 378 Query: 76 PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGGS +A E I + I +N KPVI + +AAS GY I+ +N I+A+ +++ GSIGV Sbjct: 379 PGGSVHASELIRQEIIATRNSGKPVIVSMGNIAASGGYWIATPANFIIASNSTITGSIGV 438 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 ++ LD +GV V +SP+ KA P F + MQ VD+SY + Sbjct: 439 FGIINTLEESLDAIGVHNDEVSTSPIANLSVAKALPVEFKNI-------MQLYVDTSYQY 491 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F++ V++ R ++ G IWTG++A K GLID +G Sbjct: 492 FIKTVAKFRCKTIADLDQIAQGHIWTGSDAIKHGLIDKIG 531 >gi|225175869|ref|ZP_03729862.1| signal peptide peptidase SppA, 36K type [Dethiobacter alkaliphilus AHT 1] gi|225168793|gb|EEG77594.1| signal peptide peptidase SppA, 36K type [Dethiobacter alkaliphilus AHT 1] Length = 304 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 117/200 (58%), Gaps = 8/200 (4%) Query: 37 HVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 H+ I + GQI+ ++++I +++ + D A+++ ++SPGG+ A + ++ Sbjct: 47 HLEGIIMDGQIQPLFGAPGGTRQIIGQLQDAAADRDVAAVVLRINSPGGTPAASQEVYNE 106 Query: 90 IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q++K + KPV+ V EMAAS GY I+ A++ IVA S+ GSIGV+ + + L Sbjct: 107 VQRLKESGKPVVVSVGEMAASGGYWIASAADEIVANPASVTGSIGVIMETTNFVELYEML 166 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + KS K S ++ +++Q +VD + FV +V+ R++ + L ++ Sbjct: 167 GIESEVFKSGQYKDMGSAARPLSDDEREIIQSMVDDIFQQFVDVVASGRSLDREAVLEVA 226 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 DGRI+TG +AK++GL+D +G Sbjct: 227 DGRIFTGRQAKELGLVDRLG 246 >gi|88706603|ref|ZP_01104306.1| protease IV [Congregibacter litoralis KT71] gi|88699099|gb|EAQ96215.1| protease IV [Congregibacter litoralis KT71] Length = 598 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ +++ GGS +A E I I+++ K PV+ + +AAS GY I+ A++ I A T Sbjct: 348 AIVLRVTTGGGSVFASEIIRAEIERIRKTGMPVVVSMGSVAASGGYYIATAADRIFATPT 407 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 SL GSIGV +P V+ L K GV + ++ + P +NP +Q VD Y Sbjct: 408 SLTGSIGVFAAFPTVERLLAKGGVQTDGLGTTELAGALRPDRALNPALADTLQQSVDHIY 467 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LVSESR+I L+ GR+ + +A + GLID +G Sbjct: 468 RQFLGLVSESRSIDLVTLDALAQGRVLSARDALEAGLIDGLG 509 >gi|323498312|ref|ZP_08103314.1| protease IV [Vibrio sinaloensis DSM 21326] gi|323316740|gb|EGA69749.1| protease IV [Vibrio sinaloensis DSM 21326] Length = 616 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 11/204 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEILALKEAGKPVVASMSSVAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +++ IVA T+L GSIG+ + L++LGV V ++P + + A Sbjct: 415 TSADRIVAQPTTLTGSIGIFSVITTFEKGLNELGVYTDGVGTTPFSGVGVT-TGLTEGAA 473 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + Q ++ Y F LVS SR IP + ++ GR+WTG +A +GL+D +G ++ Sbjct: 474 EAFQLGIEHGYKRFTDLVSSSREIPAAQMDNIAQGRVWTGQDALNLGLVDNIGDFDD--- 530 Query: 236 SLYALGVDQSIRKIKDWNPPKNYW 259 A+ + + ++ D+N YW Sbjct: 531 ---AVKLAAELAELTDYNL---YW 548 >gi|256018039|ref|ZP_05431904.1| protease 4 [Shigella sp. D9] gi|332279079|ref|ZP_08391492.1| protease IV (signal peptide peptidase) [Shigella sp. D9] gi|332101431|gb|EGJ04777.1| protease IV (signal peptide peptidase) [Shigella sp. D9] Length = 618 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KP + + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPAVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVNLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|271969371|ref|YP_003343567.1| signal peptide peptidase SppA, 67K type [Streptosporangium roseum DSM 43021] gi|270512546|gb|ACZ90824.1| signal peptide peptidase SppA, 67K type [Streptosporangium roseum DSM 43021] Length = 566 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 10/200 (5%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFR-AIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 RD+ A++ + SPGGS A +AI+R + K KP++ + ++AAS GY++S A++ Sbjct: 318 RDEHVKAVVFRVDSPGGSYVASDAIWREVVLTRKAGKPIVVSMGDLAASGGYMVSMAADA 377 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSPFSEVNPKAVQM 177 IVA +L GSIGV + L+K+GVS ++V ++ M + + FSE V Sbjct: 378 IVAQPGTLTGSIGVFGGKAVIGGLLEKIGVSSETVGEGANAGMFSSTNAFSEAQWARVNA 437 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE---VW 234 D V Y FV V+E R + ++ L+ GR+WTGA+A GL+D +GG ++ + Sbjct: 438 WLDRV---YEDFVNKVAEGRGLSRERAHELAKGRVWTGADAHAHGLVDELGGLQDALALA 494 Query: 235 QSLYALGVDQSIRKIKDWNP 254 + L D +R +P Sbjct: 495 RRKAGLAADAPVRAYPRLSP 514 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 5/141 (3%) Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A + Y + A + + VG GV + +++ L KLGV + + K + Sbjct: 114 AGTVPYYLGSAFERVYLQPSGDVGLTGVAMEQRFLRGALGKLGVEYQMGQRHEYKTAANT 173 Query: 167 FSE---VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 F++ +P + M + +S V V+E R + K L D + GAEA + GL Sbjct: 174 FTQDHMTDPHR-ESMGRITESVTEQIVAGVAEGRGLEPTKVRKLIDEGPFIGAEAVEAGL 232 Query: 224 IDVVGGQEEVWQSL-YALGVD 243 +D + ++EV+ + A+G D Sbjct: 233 VDRMAYRDEVYDEVKQAVGDD 253 >gi|152979231|ref|YP_001344860.1| signal peptide peptidase SppA, 67K type [Actinobacillus succinogenes 130Z] gi|150840954|gb|ABR74925.1| signal peptide peptidase SppA, 67K type [Actinobacillus succinogenes 130Z] Length = 625 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 110/202 (54%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A + + G I D + +++ +++ D+ AL++ ++SPGGSA+A E I Sbjct: 329 NIAVVNVEGTIIDGESDDQNVGGDTVVKLLQQAQTDERIKALVLRVNSPGGSAFASEKIR 388 Query: 88 RAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + + K KPV+ + MAAS GY IS ++ IVA + +L GSIG+ +P + Sbjct: 389 QELTALQKQGKPVVVSMGGMAASGGYWISSTADYIVADKNTLTGSIGIFAMFPTFEKTAK 448 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV+ + +SP+ A+ S + + Q ++ Y F+R+VSE R + ++ Sbjct: 449 NIGVTADGISTSPL-ADISSLESPSKVVKDVYQLEIEHGYDEFLRVVSEGRRLDKEQVDQ 507 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G++W G +A K L+D +G Sbjct: 508 VAQGQVWLGQDAAKYHLVDALG 529 >gi|86149662|ref|ZP_01067892.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597632|ref|ZP_01100865.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 84-25] gi|218561753|ref|YP_002343532.1| protease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839930|gb|EAQ57189.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni CF93-6] gi|88189936|gb|EAQ93912.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 84-25] gi|112359459|emb|CAL34242.1| protease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925364|gb|ADC27716.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni IA3902] Length = 298 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 109/213 (51%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S++ N ++ RI ++G+I DS ++E+I D + ++ + SPGG+ + Sbjct: 38 SANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELA 97 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+ +K +KPV+ AS YL +N I+A S +GSIGV+ Q + +K Sbjct: 98 LAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANK 157 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ +++++ K+ + N +Q ++D SY F V++ R + +K Sbjct: 158 LGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQW 217 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ R++ A+AK++GLID + E + L L Sbjct: 218 ANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|254362448|ref|ZP_04978557.1| S49 family peptidase IV [Mannheimia haemolytica PHL213] gi|261494115|ref|ZP_05990618.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496044|ref|ZP_05992454.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094037|gb|EDN74953.1| S49 family peptidase IV [Mannheimia haemolytica PHL213] gi|261308294|gb|EEY09587.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310281|gb|EEY11481.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 618 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 33/283 (11%) Query: 31 VEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAY 81 E N+P +A + + G I S+ L++ +++ D + LI+ ++SPGGSA Sbjct: 317 AEVNAPKIAVVNVEGAIAGGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAV 376 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + ++ + KPV+ + MAAS GY I+ S+ I+A+ +L GSIG+ Sbjct: 377 ASELIRQEVEAFQQAGKPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVT 436 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LGVS + +S + A+ + + + +++Q +++ Y F+ LVS R +P Sbjct: 437 FEKTAKNLGVSEDGIATSAL-AQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMP 495 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN--- 257 + ++ G++W G +A K GL+D +G + +L L ++Q K + N PK Sbjct: 496 KEVVDKVAQGQVWLGTDALKHGLVDELGNFNVAYNALSEL-INQ---KREAENQPKVEQF 551 Query: 258 --YWFCDLKNLSISSLLED-------------TIPLMKQTKVQ 285 WF + + +L D +PL+KQ + Q Sbjct: 552 GLQWFAEQDDSLFGTLARDFKAQLQFSVANWLDLPLLKQPQQQ 594 >gi|238794514|ref|ZP_04638123.1| Protease 4 [Yersinia intermedia ATCC 29909] gi|238726197|gb|EEQ17742.1| Protease 4 [Yersinia intermedia ATCC 29909] Length = 616 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRSELAALRAANKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L+ +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLESIGVHTDGVATSPL-ADISVTKNLP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWLGIDAKNNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + + + L K+K W + WF D +LS Sbjct: 529 DAVKKVAELA------KLKTW---QLNWFVDEPSLS 555 >gi|227501017|ref|ZP_03931066.1| S49 family peptidase [Anaerococcus tetradius ATCC 35098] gi|227216790|gb|EEI82188.1| S49 family peptidase [Anaerococcus tetradius ATCC 35098] Length = 327 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 109/183 (59%), Gaps = 2/183 (1%) Query: 48 EDSQELIERIERISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHE 105 +D+ + + + ++DD +I++++SPGGS YA E I AI+ +K K PV T + + Sbjct: 75 DDANDFVVSELKDAKDDPLVKGVILNVNSPGGSVYASERIANAIKALKKAKKPVYTVMGQ 134 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 MAAS GY IS +N I A+ + GSIGV+ Q ++ DK G+ +++ + MK S Sbjct: 135 MAASGGYYISAPTNRIYASNETWTGSIGVIIQSYSLQGLFDKYGIKEQNITTGKMKDAGS 194 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++N + + Q +V+S++ FV++V E R + + ++DGR++ G++A +GL+D Sbjct: 195 QGRDMNKEEKEYFQGLVNSAFDRFVKIVVEGRGLSEKEVRKIADGRVYDGSQALSLGLVD 254 Query: 226 VVG 228 +G Sbjct: 255 KIG 257 >gi|156743028|ref|YP_001433157.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] gi|156234356|gb|ABU59139.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] Length = 348 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 4/226 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++L+ +I + D A+++ + SPGGS A ++ ++K++ + KP++ + +AAS Sbjct: 104 EQLLSQIRTAANDSRVKAVVLRVDSPGGSVVASNELYVELKKLREKGKPLVISMGSIAAS 163 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY IS A I A +L GS+GV+ ++LG+ KS K SP Sbjct: 164 GGYYISMAGERIYANPDTLTGSLGVIVSLLNYDEAFERLGLREYVYKSGDFKDIGSPLRP 223 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 P+ + +VD +Y F+ ++ E R + + + L+DGRI+TG +AK +GLID +G Sbjct: 224 PQPEEEAIWNALVDEAYQGFIDVIVEGRGMERTEVIRLADGRIYTGRQAKALGLIDELGN 283 Query: 230 QEEVWQSLYALG--VDQSIRKIKDWNPPKNYWFCDL-KNLSISSLL 272 E+ + L D I + + +N + +L +NL S L Sbjct: 284 LEDAIEGAKELAGLTDALIVRYRSFNTLRELLQANLEQNLQPSDPL 329 >gi|330911571|gb|EGH40081.1| protease 4 [Escherichia coli AA86] Length = 622 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEVQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKTL 299 >gi|260772423|ref|ZP_05881339.1| protease IV [Vibrio metschnikovii CIP 69.14] gi|260611562|gb|EEX36765.1| protease IV [Vibrio metschnikovii CIP 69.14] Length = 616 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 2/180 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + +D A+I+ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNNDQVKAVILRVDSPGGSAFASEVIRNEIEALKAAGKPVVASMSSLAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +++ IVA T+L GSIG+ + L+ LG+ V +SP + +N K Sbjct: 415 MSADHIVAQPTTLTGSIGIFSVITTFEKGLNHLGIYTDGVGTSPFSG-VGVTTGLNEKVK 473 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q +++ Y F+ LVSE R + ++ ++ G +WT +A++ GL+D +G ++ Q Sbjct: 474 DAIQMGIENGYQRFISLVSEQRGLSIEEVDKIAQGHVWTAKDAQQAGLVDTLGDFDDAVQ 533 >gi|148980157|ref|ZP_01815908.1| protease IV [Vibrionales bacterium SWAT-3] gi|145961375|gb|EDK26682.1| protease IV [Vibrionales bacterium SWAT-3] Length = 607 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 6/187 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 346 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEAIKQAGKPVVVSMSSLAASGGYWIS 405 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPK 173 ++ I+A T+L GSIG+ + L+ +GV V +SP + +E Sbjct: 406 MGADKILAQPTTLTGSIGIFSVITTFEKGLNDIGVYTDGVGTSPFSGLGITTGLTEGAKD 465 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 A QM ++ Y F+ LV E+R + D ++ GR+WTG +A + GL+D +G ++ Sbjct: 466 AFQMG---IEHGYRRFIGLVGENRGMDVDAVDKIAQGRVWTGQDAMQNGLVDEIGDFDDA 522 Query: 234 WQSLYAL 240 S +L Sbjct: 523 IASAASL 529 >gi|84393631|ref|ZP_00992383.1| protease IV [Vibrio splendidus 12B01] gi|84375772|gb|EAP92667.1| protease IV [Vibrio splendidus 12B01] Length = 616 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 6/175 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEAIKQAGKPVVVSMSSLAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPK 173 ++ I+A T+L GSIG+ + L+ +GV V +SP + S+ Sbjct: 415 MGADKILAQPTTLTGSIGIFSVITTFEKGLNDIGVYTDGVGTSPFSGLGITTGLSDGAKD 474 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 A QM +++ Y F+ LV E+R + D ++ GR+WTG +A + GL+D +G Sbjct: 475 AFQMG---IENGYRRFISLVGENRGMEVDAVDKIAQGRVWTGQDAIQKGLVDEIG 526 >gi|281178836|dbj|BAI55166.1| protease IV [Escherichia coli SE15] Length = 618 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEVQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKTL 295 >gi|225012275|ref|ZP_03702712.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-2A] gi|225003830|gb|EEG41803.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-2A] Length = 588 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 124/243 (51%), Gaps = 17/243 (6%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +E ++ ++ D+ A+++ + SPGG+A + ++RAI+K+K +KPV+ + +AAS GY Sbjct: 331 FVETLKELAEDEWIKAVVIRVESPGGNALTSDLLWRAIEKLKTKKPVLVSMGNVAASGGY 390 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ ++ I A ++ GSIGV P + +K+G+ ++V++ S F + Sbjct: 391 YIAAGADQIFADPLTITGSIGVFASLPNIYGMTEKIGIHAETVETHQNALGYSFFQPLTE 450 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++++Y+ F + V + R + + L+ GR+W+G +A VGL+D +GG ++ Sbjct: 451 SFKIRTIKSIENTYNTFKQRVIKGRGLTSETVEALAQGRVWSGKQALSVGLVDHLGGLQD 510 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI--PLMKQTKVQGLWAV 290 A+ + I+++N F + + S+L I PL K T W Sbjct: 511 ------AIEAAAEVANIENYNTIDYPKFEE----DLESILSGAIPSPLSKAT-----WMH 555 Query: 291 WNP 293 W P Sbjct: 556 WVP 558 >gi|56460437|ref|YP_155718.1| periplasmic serine protease [Idiomarina loihiensis L2TR] gi|56179447|gb|AAV82169.1| Periplasmic serine protease, ClpP family [Idiomarina loihiensis L2TR] Length = 616 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 115/202 (56%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQEL--------IERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIF 87 +A + RGQI + + ++ R +R++ T A+++ + SPGGSA+A E I Sbjct: 324 QIAVVVARGQIVNGSQKAGMIGGDSTAKLIREARNNKQTKAIVLRIDSPGGSAFASEIIR 383 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + I + K PV+ + +AAS GY I+ ++ IVAA T++ GSIGV ++ L Sbjct: 384 QEILQAKEAGIPVVASMSTVAASGGYWIAADADKIVAAPTTITGSIGVFGLLMTLEDSLA 443 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV +V ++ ++ +P E+ +++Q V+++Y F+ +VS++RN+ D Sbjct: 444 AIGVHSDTVSTTEIQG-LNPLEEMTEYQKKLVQSSVEATYEDFLTIVSKARNMSRDDVHE 502 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ GRIWTG +A + GL+D +G Sbjct: 503 VAQGRIWTGKQAMERGLVDQLG 524 >gi|34764084|ref|ZP_00144963.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886138|gb|EAA23435.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 263 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ + E +E++ +D A+++ ++SPGGSA + I ++++ KPV + Sbjct: 10 GEEYNVSETLEKLNIAKENDKIKAVVLRVNSPGGSALTSDIIAEKVKELAEEKPVYVSMS 69 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY IS +N I ++ GSIGV+ P + GV+I+ + E Sbjct: 70 SVAASGGYYISANANKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKISD----GEY 125 Query: 165 SPFSEVNPKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 S V+ + + +S+ Y F+ +VS+ R I +K +++GRIWTG EA K+ Sbjct: 126 SDLYSVDSFTEKKYNKIYNSNLKVYEDFLNVVSKGRKIDKEKLKTIAEGRIWTGDEAIKI 185 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSI 246 GL D +GG E ++YAL D + Sbjct: 186 GLADEIGGLNE---TIYALAEDNDM 207 >gi|315927751|gb|EFV07078.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 298 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 109/213 (51%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S++ N ++ RI ++G+I DS ++E+I D + ++ + SPGG+ + Sbjct: 38 SANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELA 97 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+ +K +KPV+ AS YL +N I+A S +GSIGV+ Q + +K Sbjct: 98 LAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANK 157 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ +++++ K+ + N +Q ++D SY F V++ R + +K Sbjct: 158 LGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQW 217 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ R++ A+AK++GLID + E + L L Sbjct: 218 ANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|262277441|ref|ZP_06055234.1| peptidase family S49 [alpha proteobacterium HIMB114] gi|262224544|gb|EEY75003.1| peptidase family S49 [alpha proteobacterium HIMB114] Length = 268 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 17/219 (7%) Query: 36 PHVARIAIRGQIED-----------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 P VA I + G I + S E I I++ +A+ +S++SPGGS Sbjct: 7 PQVAHIRLSGVIGNVGRFQQGMSLSSHEKI--IKKAFNQKKLSAVAISINSPGGSPVQSH 64 Query: 85 AIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ I+++ K V IT ++AAS GY+++CA + I A +S+VGSIGV++ +K Sbjct: 65 LIYSLIRRLAEEKKVKVITFAEDVAASGGYMLACAGDEIYANPSSIVGSIGVIYSSFGLK 124 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIP 200 + K+G+ + + K+ PF + P+ ++ ++ + + F+ LV SR I Sbjct: 125 ELIKKIGIERRVHTAGKNKSTLDPFMDEKPEDIERLKKIQLDLHDQFISLVKNSRKDKIS 184 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 DK L G W+G ++K++GL+D +G E+V Q + Sbjct: 185 SDKDDQLFTGEFWSGIQSKELGLVDGLGNMEDVIQEKFG 223 >gi|322436182|ref|YP_004218394.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX9] gi|321163909|gb|ADW69614.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX9] Length = 353 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 2/194 (1%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-- 95 +A I I G I D+ ++ ++ + D S A+I+ ++SPGG A A + I+ + +V+ Sbjct: 100 IAVIDIDGVILDADKVDSQLRKFGDDSSVKAIILHINSPGGGAAASQEIYHEVLRVRQEK 159 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 K ++ V + AS Y I+ A + I A + S+VGSIGV+ ++ + + + Sbjct: 160 HKKIVASVESVGASGAYYIASACDKIYANQASVVGSIGVIMEWTNYGDLMKWAKLKPVVI 219 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + +K P ++ PK Q + D+ Y FVR V+ R+ +K L+ G++WTG Sbjct: 220 HAGELKDAGDPSRDMTPKEAAYFQALTDNMYGQFVRDVAAGRHTSTEKIQPLATGQVWTG 279 Query: 216 AEAKKVGLIDVVGG 229 ++ +GLID +GG Sbjct: 280 EQSLPLGLIDKIGG 293 >gi|254456509|ref|ZP_05069938.1| Clp protease [Candidatus Pelagibacter sp. HTCC7211] gi|207083511|gb|EDZ60937.1| Clp protease [Candidatus Pelagibacter sp. HTCC7211] Length = 268 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 13/232 (5%) Query: 38 VARIAIRGQIEDSQELIERIERISRDD---------SATALIVSLSSPGGSAYAGEAIFR 88 VA + + G I ++ + + I+ +++ A + ++++SPGGS I+ Sbjct: 11 VAHLKLNGVIGNAGKFKQGIDFAGQEEVIKKAFSLKKAHTVAITINSPGGSPVQSHLIYS 70 Query: 89 AIQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I++ KN+K VI ++AAS GYLISCA + I A +S++GSIGV++ + Sbjct: 71 FIRQEAKKNKKKVIVFAEDVAASGGYLISCAGDEIYANSSSIIGSIGVIYSSFGFTELIK 130 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+GV + + K+ PF E + ++ ++ + + F+ +V +SR + DK+ V Sbjct: 131 KIGVERRVHTAGKNKSTLDPFLEEKNEDIERLKKIQIDLHKDFIDVVEKSRGLKLDKSGV 190 Query: 207 -LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQSIRKIKDWNPPK 256 L G W+G++AK +GLID +G EV + + V + K K W K Sbjct: 191 ELFSGEFWSGSKAKDLGLIDGIGNAHEVLKEKFGDDVIIKKFEKTKGWLSQK 242 >gi|331647259|ref|ZP_08348353.1| signal peptide peptidase SppA, 67K type [Escherichia coli M605] gi|331044042|gb|EGI16178.1| signal peptide peptidase SppA, 67K type [Escherichia coli M605] Length = 622 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEVQQMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E ++L Sbjct: 283 NKLVDALASSAEFEKTL 299 >gi|152980027|ref|YP_001353040.1| U7 family peptidase [Janthinobacterium sp. Marseille] gi|151280104|gb|ABR88514.1| peptidase U7 family [Janthinobacterium sp. Marseille] Length = 334 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 18/248 (7%) Query: 4 VLKKIKTRY---VMLSLVTLTVVYFS-WSS------HVEDNSPHVARIAIRGQIE----- 48 LK+ + R + VT+ ++ F+ W S +E+ PH A I I G IE Sbjct: 39 TLKEQRARRRWGIFFKFVTVALIAFALWMSFGPSVGDMENVGPHTALIKIDGTIEAKGAG 98 Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHE 105 D+ +I + + D + LI+ ++SPGGS I + +++ + KP+ V+E Sbjct: 99 DADSVISALTKAYADPGSVGLILQINSPGGSPVQAGIINDEMTRLRKKYPQKPLYVVVNE 158 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 M AS GY I+ A++ I + SLVGSIGVL ++KLGV + + + K Sbjct: 159 MCASGGYYIAVAADRIYVNKASLVGSIGVLMDGFGFTGTMEKLGVERRMLTAGNNKGFMD 218 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PFS QD+++ + F+ +V + R +T G +WTGA++ ++GL D Sbjct: 219 PFSPQTETQKHYAQDMLNEIHQQFIDVVRKGRGKRLKETPETFSGLVWTGAKSIELGLAD 278 Query: 226 VVGGQEEV 233 G E V Sbjct: 279 GFGTVESV 286 >gi|312194538|ref|YP_004014599.1| peptidase S49 [Frankia sp. EuI1c] gi|311225874|gb|ADP78729.1| peptidase S49 [Frankia sp. EuI1c] Length = 827 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 7/175 (4%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNI 120 +D A + + SPGGS A + + R +++ + +PVI + +AAS GY ++ A++ Sbjct: 525 KDPDIAAAVFRVDSPGGSYVASDLVRREVERFRATGRPVIVSMGAVAASGGYFVALAADT 584 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP---MKAEPSPFSEVNPKAVQM 177 IVA ++L GSIGV + LDKLGV+I V M + PFS P Sbjct: 585 IVANPSTLTGSIGVYGGKQVISGLLDKLGVAIGEVAQGEHALMMSARRPFS---PGERAK 641 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + +D Y FV V+ SR +P ++ L+ GR+WTGA+A + GL+D +GG E Sbjct: 642 LDEFLDRVYADFVGKVATSRAMPLERADELARGRVWTGADAHRHGLVDELGGLER 696 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ++CA + I A +G GV P+++ LD+LGV+ + K + F E Sbjct: 120 YYLACAFDQIWLAPPGDLGLTGVASHTPFLRDALDRLGVAAELGARHEYKNAVNTFVERG 179 Query: 172 PKA--VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 A ++ VV+SS + + R +P D+ L D + A + GL+D +G Sbjct: 180 FTAEHLEATTRVVESSADEIIAGIVAGRRLPADRVRRLVDAGPLSAQVALRTGLVDRLGY 239 Query: 230 QEEVW 234 ++EV+ Sbjct: 240 RDEVY 244 >gi|307110504|gb|EFN58740.1| hypothetical protein CHLNCDRAFT_34059 [Chlorella variabilis] Length = 610 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 5/204 (2%) Query: 59 RISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R D A A ++ + SPGGSA A EAI R + V KPV+ + +AAS GY I+ Sbjct: 328 RAARQDPAVKACVLRVDSPGGSAAASEAIHREVSLVVGAGKPVVVSMGNVAASGGYYIAT 387 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ IVA +L GSIGVL L + GVS++ V A SP + + Sbjct: 388 AASKIVAQPGTLTGSIGVLAGKLVCDAALREYGVSVEVVTVGRSAAAMSPLTPFTRHQRR 447 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE---EV 233 +++ +D++Y F + V+E R + + L+ GR+WTG +A + GL+D +GG + E+ Sbjct: 448 RVEEFMDATYALFKQRVAEGRGLKPEAVAKLAKGRVWTGEQAVEAGLVDQLGGLQAAVEL 507 Query: 234 WQSLYALGVDQSIRKIKDWNPPKN 257 + L +++ +++ P K Sbjct: 508 AKREAGLPLEEGAVELRQAYPEKK 531 >gi|86148498|ref|ZP_01066787.1| protease IV [Vibrio sp. MED222] gi|85833738|gb|EAQ51907.1| protease IV [Vibrio sp. MED222] Length = 616 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 6/175 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + DD A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 355 LRQARNDDKVKAVVLRVDSPGGSAFASEVIRNEIEAIKQAGKPVVVSMSSLAASGGYWIS 414 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPK 173 ++ I+A T+L GSIG+ + L+ +GV V +SP + S+ Sbjct: 415 MGADKILAQPTTLTGSIGIFSVITTFEKGLNDIGVYTDGVGTSPFSGLGITTGLSDGAKD 474 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 A QM +++ Y F+ LV E+R + D ++ GR+WTG +A + GL+D +G Sbjct: 475 AFQMG---IENGYRRFISLVGENRGMEVDTVDKIAQGRVWTGQDAIEKGLVDEIG 526 >gi|304396127|ref|ZP_07378009.1| signal peptide peptidase SppA, 67K type [Pantoea sp. aB] gi|304356496|gb|EFM20861.1| signal peptide peptidase SppA, 67K type [Pantoea sp. aB] Length = 620 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 12/251 (4%) Query: 37 HVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A + G I D +E +I D A+I+ ++SPGGS A EAI Sbjct: 329 NIAVVMASGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIILRVNSPGGSVTASEAIR 388 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + KP++ + MAAS GY IS ++ IVA ++L GSIG+ ++ LD Sbjct: 389 EELAAAQAAGKPIVVSMGGMAASGGYWISTPASYIVANPSTLTGSIGIFGVINTLENSLD 448 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ S + + QMMQ +++ Y FV LV++SR+ ++ Sbjct: 449 SIGVHTDGVATSPL-ADISTTKALPAEVQQMMQLTIENGYRNFVGLVAKSRHKTPEQIDA 507 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G +WTG++AK GL+D +G ++ + L VD+ + +P N Sbjct: 508 IAQGHVWTGSDAKANGLVDALGDFDDAVKKAGELAKVDKPMLSWYQDDPSFLDMMLSQMN 567 Query: 266 LSISSLLEDTI 276 S+ ++L DT+ Sbjct: 568 ASVQAVLPDTL 578 >gi|149910099|ref|ZP_01898746.1| putative protease IV [Moritella sp. PE36] gi|149806824|gb|EDM66786.1| putative protease IV [Moritella sp. PE36] Length = 620 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 11/214 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V I GQI D + L + + + D+ AL++ + SPGGSA+A E I Sbjct: 329 PGVGIIFANGQILDGNQPPGAIGGKSLTKLLLQAKDDEQIKALVLRIDSPGGSAFASEQI 388 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 A+ ++K KPVI + +AAS GY I+ A++ I A T++ GSIG+ + + L Sbjct: 389 RTALLELKKSGKPVIVSMGSVAASGGYWIASAADEIWAKPTTITGSIGIFGLFATTEKLL 448 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+G+ V ++ S E+ Q++Q V++ Y F+ +V+E R + ++ Sbjct: 449 AKMGIYSDGVGTTDFTG-LSVNRELPEHMAQIIQMTVENGYSNFLTVVAEGRGMTTEEVD 507 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ GR+WTG +A +GLID +G ++ S A Sbjct: 508 KIAQGRVWTGRDALNLGLIDNLGNLDDAIASAAA 541 >gi|87123710|ref|ZP_01079560.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. RS9917] gi|86168279|gb|EAQ69536.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. RS9917] Length = 272 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ + I A+ +++++ V+ ++AS G + AS +IV+ Sbjct: 47 ALLLRIDSPGGTVGDSQEIHAALLRLRDKGCRVVASFGNISASGGVYVGVASEMIVSNPG 106 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ + + L+++G+ ++VKS K SP ++ + ++Q ++DSSY Sbjct: 107 TITGSIGVILRGNNLSKLLERVGIRFETVKSGAYKDILSPDRALSAEERDLLQSLIDSSY 166 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 FV+ V++ R + D +DGR+++GA+AK++GL+D +G +E Sbjct: 167 EQFVQAVAQGRQLEPDVVRQFADGRVFSGAQAKELGLVDALGDEE 211 >gi|294785166|ref|ZP_06750454.1| protease IV [Fusobacterium sp. 3_1_27] gi|294486880|gb|EFG34242.1| protease IV [Fusobacterium sp. 3_1_27] Length = 578 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E +E++ +D A+++ ++SPGGSA + I ++++ KPV + +AAS G Sbjct: 332 ETLEKLNIAKENDKIKAVVLRVNSPGGSALTSDIIAEKVKELAEEKPVYVSMSSVAASGG 391 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I ++ GSIGV+ P + GV+I+ + E S V+ Sbjct: 392 YYISANANKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKISD----GEYSDLYSVD 447 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +S+ Y F+ +VS+ R I +K +++GRIWTG EA K+GL D +G Sbjct: 448 SFTEKKYNKIYNSNLKVYEDFLNVVSKGRKIDKEKLKTIAEGRIWTGDEAIKIGLADEIG 507 Query: 229 GQEEVWQSLYALGVDQSI 246 G E ++YAL D + Sbjct: 508 GLNE---TIYALAEDNDM 522 >gi|237742266|ref|ZP_04572747.1| protease IV [Fusobacterium sp. 4_1_13] gi|256845537|ref|ZP_05550995.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] gi|229429914|gb|EEO40126.1| protease IV [Fusobacterium sp. 4_1_13] gi|256719096|gb|EEU32651.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] Length = 578 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E +E++ +D A+++ ++SPGGSA + I ++++ KPV + +AAS G Sbjct: 332 ETLEKLNIAKENDKIKAVVLRVNSPGGSALTSDIIAEKVKELAEEKPVYVSMSSVAASGG 391 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I ++ GSIGV+ P + GV+I+ + E S V+ Sbjct: 392 YYISANANKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKISD----GEYSDLYSVD 447 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +S+ Y F+ +VS+ R I +K +++GRIWTG EA K+GL D +G Sbjct: 448 SFTEKKYNKIYNSNLKVYEDFLNVVSKGRKIDKEKLKTIAEGRIWTGDEAIKIGLADEIG 507 Query: 229 GQEEVWQSLYALGVDQSI 246 G E ++YAL D + Sbjct: 508 GLNE---TIYALAEDNDM 522 >gi|271500691|ref|YP_003333716.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech586] gi|270344246|gb|ACZ77011.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech586] Length = 616 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 11/220 (5%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATAL 69 T +Y ++ +S +A + G I D +E +I D A+ Sbjct: 307 NFTSIYDYTTTPPATSSNEIAVVFASGTIIDGKETPGYVGGDTTAAQIRDARLDPKVKAI 366 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++SPGGS A E I + + KPVI + MAAS GY IS +N I+A+ +L Sbjct: 367 ILRVNSPGGSVTASELIRSELMAARQAGKPVIVSMGGMAASGGYWISTPANTIIASPNTL 426 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ + LD +GV V +SP+ A+ S + P+ Q+MQ ++ Y Sbjct: 427 TGSIGIFGVVTTFENALDSIGVHTDGVATSPL-ADLSQTKTLPPQVSQLMQLSIERGYQN 485 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LV++SR + ++ G +W G++AK GL+D +G Sbjct: 486 FISLVAQSRQKTPQEVDAIAQGHVWVGSDAKANGLVDQLG 525 >gi|254786960|ref|YP_003074389.1| signal peptide peptidase SppA, 67K type [Teredinibacter turnerae T7901] gi|237686224|gb|ACR13488.1| signal peptide peptidase SppA, 67K type [Teredinibacter turnerae T7901] Length = 618 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 120/228 (52%), Gaps = 4/228 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAA 108 S L E I R DDS A+++ + S GGSA+A E I + I K+ KPV + MAA Sbjct: 342 SASLTELIRRARDDDSIAAIVLRIDSGGGSAFASEVIRQEILNTRKSGKPVYISMGSMAA 401 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ++ A + I A ++L GSIGV P + L+KLGV V ++ + P Sbjct: 402 SGGYWVASAGDEIWATPSTLTGSIGVWGLIPNLANALNKLGVHSDGVGTTELADIYHPDR 461 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ A Q++Q ++ Y F+ +V+E+R+ ++ GR+W+G A +GL+D +G Sbjct: 462 PLSAPAKQLIQSGINDVYDHFLNIVAEARDSDPASVHEIAQGRVWSGEAAASLGLVDKLG 521 Query: 229 GQEEVWQSLYA-LGVDQ-SIRKIK-DWNPPKNYWFCDLKNLSISSLLE 273 + ++ +G +++IK + P + ++ +S+S L++ Sbjct: 522 TLHDTLDAVAEHIGAGSYRVKQIKRELTPTEEIMHALMQEVSVSGLVD 569 >gi|188533707|ref|YP_001907504.1| protease 4 [Erwinia tasmaniensis Et1/99] gi|188028749|emb|CAO96611.1| Protease IV [Erwinia tasmaniensis Et1/99] Length = 618 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQELIERIE--------RISR-DDSATALIVSLSSPGGSAYAGEAIF 87 +VA I G I D +E + R +R D A++ ++SPGGS A E I Sbjct: 327 NVAVILASGAIMDGEEAPGSVGADTTALEIRSARLDPKIKAIVFRVNSPGGSVTASETIR 386 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + K+ KPV+ + MAAS GY +S +N ++A+ +L GSIG+ V+ LD Sbjct: 387 EELAAAKDAGKPVVVSMGGMAASGGYWVSTPANYVIASPATLTGSIGIFGVINTVENSLD 446 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ + + + QMMQ +D Y F+ LV++SRN + Sbjct: 447 AIGVHTDGVATSPL-ADVASTKALPSEVQQMMQLSIDKGYQNFIGLVAKSRNKTPVEIDR 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG +AK GL+D +G Sbjct: 506 IAQGHVWTGNDAKANGLVDALG 527 >gi|330007634|ref|ZP_08305981.1| signal peptide peptidase SppA [Klebsiella sp. MS 92-3] gi|328535428|gb|EGF61902.1| signal peptide peptidase SppA [Klebsiella sp. MS 92-3] Length = 617 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 19/237 (8%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D +A I G I D +E +I D A+++ ++SPGGS A Sbjct: 322 DQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIVLRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + K KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ Sbjct: 382 EIIREELAAAKTAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +GV V +SP+ A+ S + P+ Q+MQ +++ Y F+ LV+ +R + Sbjct: 442 NTLGSIGVHTDGVATSPL-ADVSSTKALPPEVQQLMQLSIENGYQRFITLVANARKSTPE 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 K ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ NY+ Sbjct: 501 KIDQIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLKTWH--LNYY 549 >gi|300691993|ref|YP_003752988.1| peptidase S49 [Ralstonia solanacearum PSI07] gi|299079053|emb|CBJ51715.1| Peptidase S49 [Ralstonia solanacearum PSI07] Length = 378 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVT-LTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 +I R+V L+++ L V S+ + H A + + G+I + + +E Sbjct: 92 RIFFRFVTLAIIGGLLYVLASFEGETVSSGRHTALVTLDGEIAANTNASADNINASLEAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKYKNIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGTNKGMLDPFSPVPPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTGA+A ++GL D +G + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGAKAVELGLADGIGSADFVARNV 331 >gi|168008373|ref|XP_001756881.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691752|gb|EDQ78112.1| predicted protein [Physcomitrella patens subsp. patens] Length = 534 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 6/194 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 R+ + G+ S IERI + A+I+ + S GG A A + ++R I+ + RKP Sbjct: 301 GRLGVSGEGIVSDSFIERIRFVREAKQFKAVIIRIDSGGGDALASDLMWREIKLLAERKP 360 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSV 155 VI + ++AAS GY ++ A+ +++A ++ GSIGV+ + +++G + I Sbjct: 361 VIASMADVAASGGYYMAMAAGVVLAEPLTITGSIGVVTAKFNLATLYERVGFAKEIISRG 420 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K + + A+ PFS P+ ++ ++Y F +ESR++P +K ++ GR+WTG Sbjct: 421 KFAELDADQRPFS---PEEENFFKESAMNAYTSFRNKAAESRSMPIEKLEEVAQGRVWTG 477 Query: 216 AEAKKVGLIDVVGG 229 A GL+D +GG Sbjct: 478 KAALDRGLVDTLGG 491 >gi|218779085|ref|YP_002430403.1| signal peptide peptidase SppA, 36K type [Desulfatibacillum alkenivorans AK-01] gi|218760469|gb|ACL02935.1| signal peptide peptidase SppA, 36K type [Desulfatibacillum alkenivorans AK-01] Length = 324 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 101/179 (56%), Gaps = 2/179 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAA 108 QE++ ++ DD+ A+++ + SPGG+A A + ++ I++ K + K V+ +AA Sbjct: 72 QEVVSQLRMAEEDDAVKAVVIKVDSPGGTATASDILYHEIKEFKEKTGKKVMCVFMNVAA 131 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY +S ++ IVA TS+ GS+GV+ P K +DK+GV ++ KS K SPF Sbjct: 132 SGGYYMSLPADRIVAHPTSITGSVGVIMVQPAFKDLMDKVGVGMRVSKSGRNKDMGSPFR 191 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + V+++ V++ FV V + RN+ + + RI+ ++A ++GLID V Sbjct: 192 DPTDEEVRLLNGVINDLAEQFVGHVKDHRNLTPEALEEVRTARIFVASKALELGLIDEV 250 >gi|238757018|ref|ZP_04618206.1| Protease 4 [Yersinia aldovae ATCC 35236] gi|238704848|gb|EEP97377.1| Protease 4 [Yersinia aldovae ATCC 35236] Length = 616 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+++ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVVLRVNSPGGSVSASELIRSELTALRAANKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L+ +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNTLESIGVHTDGVATSPL-ADISITKNLP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFAQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGVDAKSNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + + + L ++K W + WF D +LS Sbjct: 529 DAVKKVAELA------QLKTW---QLNWFIDEPSLS 555 >gi|332993393|gb|AEF03448.1| signal peptide peptidase SppA, 67K type [Alteromonas sp. SN2] Length = 621 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 107/182 (58%), Gaps = 9/182 (4%) Query: 56 RIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 R+ R +R D++ A+++ + SPGGS E I + + ++KN KPV+ + AAS GY Sbjct: 358 RLLRKARLDENVKAVVLQIDSPGGSTLGSEIIRQEVLELKNAGKPVVVSMSTYAASGGYW 417 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ ++ I A+ +++ GSIGV + + LD LG+ V S+ E + FS V P Sbjct: 418 IAANADRIFASPSTITGSIGVFGMFMTYENSLDYLGIHSDGVGSN----ELAGFSAVRPL 473 Query: 174 A---VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 A Q++Q V++SY F+ LVS +R++ D+ ++ GR+W G +A ++GL+D +G Sbjct: 474 APEFGQILQRNVETSYGNFLSLVSNARDMTVDEVDDVAQGRVWIGTDALELGLVDELGTL 533 Query: 231 EE 232 E+ Sbjct: 534 ED 535 >gi|288917963|ref|ZP_06412322.1| signal peptide peptidase SppA, 36K type [Frankia sp. EUN1f] gi|288350618|gb|EFC84836.1| signal peptide peptidase SppA, 36K type [Frankia sp. EUN1f] Length = 692 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 1/169 (0%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNI 120 RD S A + + SPGGS A + + R I++ + +PVI + +AAS GY ++ ++ Sbjct: 395 RDSSVAAAVFRVDSPGGSYVASDVVRREIERFRATGRPVIVSMGAVAASGGYFVALGGDL 454 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +L GSIGV V+ LDK+G+ +V + SP +++ Sbjct: 455 IVANPGTLTGSIGVFGGKQVVRDLLDKVGIGFGAVAAGENALMMSPRQSFTEAERAKLEE 514 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +D Y FV V+++R + + + L+ GR+WTGA+A + GL+D +GG Sbjct: 515 FLDRVYADFVGKVAQARRMSHAEAHELARGRVWTGADAHRHGLVDELGG 563 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 33/207 (15%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +E+++ + R +RDD A L+ ++ AG +Q+V++ V E AS Sbjct: 46 REVVDGLRRAARDDRAKVLVAHIA-------AGGMPLARVQEVRD------AVAEFRASG 92 Query: 111 G------------------YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 G Y ++CA + I A VG GV + P+++ LD+LGVS+ Sbjct: 93 GVTFAYADTFGEFGGGTVAYYLACAFDEIWLAPPGDVGLTGVAMETPFLREALDRLGVSV 152 Query: 153 KSVKSSPMKAEPSPFSEVN--PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + K + E + P + + +VDS V VS R + D+ + D Sbjct: 153 EIGQRHEYKNAVNTLVERDFTPAHREALGRIVDSCAEQVVAEVSARRGLSPDQVRRMIDD 212 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +G A + GL+D +G ++E + + Sbjct: 213 APMSGRAALEAGLVDRIGYRDEAYDQV 239 >gi|114569418|ref|YP_756098.1| signal peptide peptidase SppA, 36K type [Maricaulis maris MCS10] gi|114339880|gb|ABI65160.1| signal peptide peptidase SppA, 36K type [Maricaulis maris MCS10] Length = 595 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 11/200 (5%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E I + D+S A+++ + SPGGSA A + ++ AI + + KPVI + MAAS GY Sbjct: 333 EAILAAADDNSVRAIVIRVDSPGGSAIASDQVWHAITRAREAGKPVIVSMASMAASGGYY 392 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK-----SSPMKAEPSPFS 168 I+ ++ ++A ET+L GSIGVL ++ D +G++ +++ ++ A+ Sbjct: 393 IAAPADYVLAHETTLTGSIGVLGGKIVLEGTFDLVGLNAETIAVGGEYATAFSAQQEWTD 452 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 M D+ D F + V++ R++P ++ L ++ GRIWTGA+A +GL+D +G Sbjct: 453 SQRAAYRSQMSDIYDD----FTQRVADGRDLPLERVLEIARGRIWTGAQALDLGLVDEIG 508 Query: 229 G-QEEVWQSLYALGVDQSIR 247 G ++ + + G+D R Sbjct: 509 GLRDAIGAARQFAGIDAEAR 528 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 27/193 (13%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVH--EMAA 108 EL+ +ER DD L + + G S A E + AI+ + K V+T E + Sbjct: 81 ELVRTLERAESDDRVAGLFIRANEFGMSPGAAEELRGAIEDFRAAGKFVVTHAQGFEGTS 140 Query: 109 SAGYLISCASNII------------VAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSV 155 GY S+ I +A+ET +G + F P + F + G + Sbjct: 141 VTGYFAVSGSDQIWLQDTTSFTAAGLASETMFLGGLFAHFDAVPQFEQFHEYKGAANTYT 200 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +S F+E + +A + + S Y V ++E R + D + + T Sbjct: 201 QSD--------FTEAHREAT---ESFLGSIYDTAVLRIAEDRGLQADALRAMFESAPHTA 249 Query: 216 AEAKKVGLIDVVG 228 EA+ +GLID +G Sbjct: 250 EEAQSLGLIDQLG 262 >gi|167854498|ref|ZP_02477279.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Haemophilus parasuis 29755] gi|167854253|gb|EDS25486.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Haemophilus parasuis 29755] Length = 621 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 124/233 (53%), Gaps = 7/233 (3%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVH 104 ++ S +++ + + DD +++ ++SPGGSA A E I + ++ ++ KPV+ + Sbjct: 344 EVAGSDTIVKLLRKAREDDDVRGVVLRINSPGGSAMASELIRQEVEDLQQAGKPVVASMG 403 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 MAAS GY I+ S+ I+A+ T+L GSIG+ + KLGV+ V +SP A+ Sbjct: 404 GMAASGGYWIAATSDKIIASPTTLTGSIGIFGLAVSFEKTAKKLGVNEDGVSTSPF-AQQ 462 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + ++ + +++Q +++ Y F+ LVS+ R + ++ G++W G A + GL+ Sbjct: 463 TALKSLSKEQSELIQISIENGYDRFLELVSKGRKMSKGDVDKVAQGQVWLGESAFEKGLV 522 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---WFCDLKNLSISSLLED 274 D +G ++ + +L L ++ RK K + + W D + IS ++ D Sbjct: 523 DELGDFDDAYHALTILINEK--RKAKGETEIERFSTQWLIDESDDLISQVMRD 573 >gi|255322018|ref|ZP_05363168.1| signal peptide peptidase SppA, 36K type [Campylobacter showae RM3277] gi|255301122|gb|EET80389.1| signal peptide peptidase SppA, 36K type [Campylobacter showae RM3277] Length = 289 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 121/228 (53%), Gaps = 8/228 (3%) Query: 4 VLKKIKTRY-VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 + + I T + ML L+ + +++FS N P++ +I + G I D+ E +E+IE + Sbjct: 14 IFRFINTYFKAMLFLLIVFLIFFSGKGE-SVNPPNLTQINLSGAIMDAGEALEKIEAARK 72 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + +++ + SPGG+ + A++ ++ KPV+ S Y +N I+ Sbjct: 73 DGNIKGVLLYIDSPGGALAPSVELHLAVKNLRAAKPVVAYAGGSMTSGSYYAGAGANKIL 132 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS---PFSEVNPKAVQMMQ 179 A + +GSIGV+ Q K+GVS + VK+ K + P+S++ + +Q Sbjct: 133 ANPGAFIGSIGVIMQGADASELAAKIGVSQQVVKAGEYKEAGTFLRPWSKIER---EQLQ 189 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V++SY FV V+ RN+ +K+ ++ R++ ++A K+GLID V Sbjct: 190 ELVNASYEMFVSDVAADRNLDANKSKEWANARVFLASDAAKLGLIDEV 237 >gi|240167730|ref|ZP_04746389.1| protease IV, Ssp [Mycobacterium kansasii ATCC 12478] Length = 596 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 109/190 (57%), Gaps = 2/190 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ + SPGGS A E I+R +++ + R K V+ + +AAS GY +S Sbjct: 340 LREVAADDSISAIVLRVDSPGGSVTASETIWREVKRARRRGKHVVASMGAVAASGGYYVS 399 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ IVA ++ GSIGV+ V+ ++LGV ++++++ S P+ Sbjct: 400 MAADAIVANPGTITGSIGVITGKLVVRDLKERLGVGSETLRTNANADAWSIDEPFTPEQR 459 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVW 234 + D Y FV V+E RN+ + V++ GR+WTGA+A + GL+D +GG + V Sbjct: 460 ARREAEADLFYGDFVARVAEGRNLSTEAVDVVARGRVWTGADALERGLVDELGGFRTAVR 519 Query: 235 QSLYALGVDQ 244 ++ G+D+ Sbjct: 520 RAKILAGLDE 529 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 11/216 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D +I + P A A + + AI KP + + Sbjct: 65 RDAVAAIHRAAEDPRVAGMIARVQLPPSPAGAVQELREAIAAFSAVKPSVAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A I + VG IG +++ LDK G+ + V K+ + F+E Sbjct: 125 SYYLASAFREIWLQPSGSVGLIGFASNAMFLRDALDKAGIEAEVVTRGEYKSAANLFTED 184 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M + + S W V+ESR I D L+D EA GLID Sbjct: 185 GYTDAHREAVTRMLESLQSQV-WHA--VAESRRIDVDVLNELADRAPLLRDEAVASGLID 241 Query: 226 VVGGQEEVWQSLYAL-GVDQ-SIRKIK-DWNPPKNY 258 +G ++EV+ + L G++ S+ + D PP+ Y Sbjct: 242 RIGFRDEVYARIAELVGIEGVSLESVDTDEKPPRMY 277 >gi|268589452|ref|ZP_06123673.1| signal peptide peptidase SppA [Providencia rettgeri DSM 1131] gi|291315117|gb|EFE55570.1| signal peptide peptidase SppA [Providencia rettgeri DSM 1131] Length = 618 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 15/218 (6%) Query: 25 FSWSSHVEDN----SPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIV 71 + +S+ + D S ++A I ++G I D + + +I DD+ A+++ Sbjct: 314 YDYSTKIADTNANQSGNIAVIVVQGAIMDGPQTAGIAGGDTIAAQIRDARLDDNIKAIVL 373 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A + I + KPV+ + MAAS GY +S ++ I+A+ +L G Sbjct: 374 RVNSPGGSVSASDLIRSELASAHAAGKPVVVSMGGMAASGGYWVSTPADYIIASPNTLTG 433 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + LD +GV V +SP+ A+ S ++P+ MMQ +++ Y F+ Sbjct: 434 SIGIFGVINTFEKSLDSIGVYTDGVSTSPL-ADISLTKGISPQFADMMQITIENGYETFI 492 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 LV++SR+ + ++ GR+W G +A K GL+D +G Sbjct: 493 GLVAKSRHKTPAEIDQIAQGRVWIGQDALKNGLVDQLG 530 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 19/174 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGS-----AYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++++ I + DD T +++ L G+ AY G +AI + K+ + + Sbjct: 99 DIVDTIRTAANDDRITGMVLRLDDLAGADQPSLAYIG----KAINEFKSSGKQVYAIGNS 154 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS--IKSVKSSPMKAEP 164 + Y ++ ++ I VG G Y K L+KL VS I V + EP Sbjct: 155 YNQSQYYLASYADEIYLTPQGAVGVYGFATNGLYYKSLLEKLKVSSHIFRVGTYKSAVEP 214 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 E++P+A + +D+ ++ ++ ++++RN + +I+ GA+A Sbjct: 215 LMRDEMSPEARLANKQWLDALWNNYLTEIAKNRNT--------TSTQIFPGADA 260 >gi|205374508|ref|ZP_03227304.1| signal peptide peptidase [Bacillus coahuilensis m4-4] Length = 336 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 114/219 (52%), Gaps = 16/219 (7%) Query: 35 SPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSA 80 S +A + + G I+D+ ++ ++++E I D + +++ ++SPGG Sbjct: 59 SKRIAVLEVNGVIQDTGDVASFFESPTYNHRQFMDQLEVIKEDKTIQGVVLRVNSPGGGT 118 Query: 81 YAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I + + ++K PV + +AAS GY IS ++ I A +L GS+GV+ Q Sbjct: 119 AESAQIHQKLVELKEEAEIPVYVSMGSIAASGGYYISAPADKIFAMGETLTGSLGVIMQS 178 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ GV + ++KS P K SP EV + ++Q ++D+SY FV +++ R+ Sbjct: 179 LNYSGLAEEYGVEMVTIKSGPYKDILSPTREVTEEERNILQSMIDNSYEAFVDVIATGRD 238 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + ++DGRI+ G +AK+ LID G E+ ++L Sbjct: 239 MSEAEVKRIADGRIYDGYQAKENNLIDEFGYYEDALEAL 277 >gi|307544582|ref|YP_003897061.1| peptidase [Halomonas elongata DSM 2581] gi|307216606|emb|CBV41876.1| putative peptidase [Halomonas elongata DSM 2581] Length = 361 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 7/211 (3%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGS 79 F+ VE PH+ + + G I+ + +IE IER + A A+++ + SPGGS Sbjct: 97 FAAQGPVEAKGPHLGVVEVEGVIDRESPASASRVIEGIERAWKAPGAKAVVLHIDSPGGS 156 Query: 80 AYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I+ + +++ KP+I V ++ AS Y I+ A++ IVAA SLVGSIGV+ Sbjct: 157 PVQSQRIYDEVMRLRESGDKPIIAVVEDIGASGAYYIASAADEIVAAPASLVGSIGVIHA 216 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + +LG+ + + K PF+++ P + Q+V+ +++ F+ V R Sbjct: 217 GFGFEQAIQRLGIERRVFTAGENKDFLDPFTDIEPSQQRFWQEVLATTHKQFIDDVKAGR 276 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 L G IWTG +A +GL+D +G Sbjct: 277 GDRLADDERLFSGLIWTGEQALDLGLVDRLG 307 >gi|251771849|gb|EES52423.1| signal peptide peptidase SppA, 36K type [Leptospirillum ferrodiazotrophum] Length = 334 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 2/221 (0%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 T VV+ + D + G+ + + L +E+ RD A+++ + SPGG Sbjct: 51 TEKVVFLPIHGFIGDQEKKGGTPLLGGKTDQVRLLDRELEKARRDPHVRAIVLDIDSPGG 110 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S A + ++ I + R PVI ++ AS Y + ++ + A TS+VGSIGV+ Sbjct: 111 SVTASDRLYHKILLFRQRTKIPVIAFFGDLGASGAYYTAMGADEVWARPTSVVGSIGVMI 170 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ + K+GV+ ++V S K SPF E+ P+ ++ + +V Y F+ +V Sbjct: 171 ANVGVEGLMKKVGVTDRTVASGAEKEMGSPFREMTPEDRRIFEGLVADFYATFLEVVERG 230 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + + L+DGR++T +A GL+D VG + ++ L Sbjct: 231 RRMEANHLRPLADGRVFTARQALADGLLDRVGYRSDLIDHL 271 >gi|116072773|ref|ZP_01470039.1| Peptidase S49, SppA [Synechococcus sp. BL107] gi|116064660|gb|EAU70420.1| Peptidase S49, SppA [Synechococcus sp. BL107] Length = 270 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 112/202 (55%), Gaps = 4/202 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI + G I + Q +++ + + R + AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARIVVEGPINGATRQRVLKALLEVKRRE-FPALLLRIDSPGGTVGDSQEIHAALLRLR 70 Query: 95 -NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 N V+ ++AS G I + IV+ ++ GSIGV+ + + +++G+ Sbjct: 71 ENGCRVVASFGNISASGGVYIGVGAEKIVSNPGTITGSIGVILRGNDLSRVFERIGIRFD 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP +NP+ ++QD++DSSY FV +V++ RN+ + +DGR++ Sbjct: 131 TVKSGKFKDILSPDRALNPEERALLQDLIDSSYSQFVGVVAKGRNLTEETVKTFADGRVF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQ 235 +G +A +GL+D +G ++ + Sbjct: 191 SGEQALSLGLVDELGDEDHALR 212 >gi|238788465|ref|ZP_04632258.1| Protease 4 [Yersinia frederiksenii ATCC 33641] gi|238723378|gb|EEQ15025.1| Protease 4 [Yersinia frederiksenii ATCC 33641] Length = 624 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 358 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRSELAALRAANKPLVVSMGGMAASGG 417 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A S ++ Sbjct: 418 YWISTPANYIIANPSTLTGSIGIFGVINTFQNSLESIGVHTDGVATSPL-ANVSMTKDLP 476 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 477 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGMDAKNNGLVDQLGDFD 536 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + + L K+K W + WF D +LS Sbjct: 537 DAVNKVAELA------KLKTW---QLNWFVDEPSLS 563 >gi|222478889|ref|YP_002565126.1| signal peptide peptidase SppA, 36K type [Halorubrum lacusprofundi ATCC 49239] gi|222451791|gb|ACM56056.1| signal peptide peptidase SppA, 36K type [Halorubrum lacusprofundi ATCC 49239] Length = 311 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 3/191 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++E+IE D+ AL+V L++PGG + I RA P + + AS Sbjct: 73 ADDVVEQIEAADEDEDVEALVVELNTPGGEVLPSDDIRRAAADFDG--PTLAYATDTCAS 130 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A + SLVGSIGV+ P DKLG+S + + K P E Sbjct: 131 GGYWIASGCDELWARDASLVGSIGVVGSRPNAAGLADKLGISYEQFTAGEYKDAGVPLRE 190 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +Q ++D Y FV VSE R++ + + ++ R++ G++A ++GL+D +G Sbjct: 191 IEEDEREYLQGIIDGYYEQFVETVSEGRDMDP-EAIRETEARVYLGSDAAEIGLVDELGT 249 Query: 230 QEEVWQSLYAL 240 +++V L L Sbjct: 250 EDDVEDRLEEL 260 >gi|237809431|ref|YP_002893871.1| signal peptide peptidase SppA, 67K type [Tolumonas auensis DSM 9187] gi|237501692|gb|ACQ94285.1| signal peptide peptidase SppA, 67K type [Tolumonas auensis DSM 9187] Length = 616 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N P V + G I D + L ++I D AL++ + SPGGSA+A E Sbjct: 323 NKPQVGLLVAAGAIVDGMSQPGTINGEALAKQIRTAMYDSKIKALVLRIDSPGGSAFAAE 382 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I A+ K + KP++ + MAAS GY I+ ++ I A ++ GSIGV + + Sbjct: 383 QIRTALLAFKASGKPLVVSMGSMAASGGYWIAADADKIYAEPVTITGSIGVFGMFLTAEK 442 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV + ++ SP + Q++Q V+++Y F+ LV+E R + ++ Sbjct: 443 ALNSLGVHTDGLGTTDFTG-ISPTQPLPDHIKQIVQLNVENTYQRFLDLVAEGRGMTPEQ 501 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+W G +AKK+GL+D +G Sbjct: 502 VDKVAQGRVWIGTDAKKLGLVDELG 526 >gi|149188174|ref|ZP_01866469.1| protease IV [Vibrio shilonii AK1] gi|148838162|gb|EDL55104.1| protease IV [Vibrio shilonii AK1] Length = 617 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 15/204 (7%) Query: 37 HVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 VA I G I D ++ +++ +DS ++++ + SPGGSA+A E I Sbjct: 327 QVAVIVASGTIMDGEQPRGTVGGDTTAALLKQARENDSVKSVVLRVDSPGGSAFASEVIR 386 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q +++ KPV+ + +AAS GY IS +N I+A T++ GSIG+ + L+ Sbjct: 387 NEVQALRDAGKPVVVSMSSVAASGGYWISMNANKIMAQPTTITGSIGIFSVVTTFEKGLN 446 Query: 147 KLGVSIKSVKSSPMK--AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +G++ V +SP + SE KA QM +++ Y F+ LV+ +RN+ Sbjct: 447 NIGINTDGVGTSPFSGVGVTTGISEGASKAFQMG---IENGYKRFITLVANNRNMSVTDV 503 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+WTG +A + GL+D +G Sbjct: 504 DSVAQGRVWTGKDALERGLVDQIG 527 >gi|87242919|gb|ABD33956.1| protease IV [uncultured bacterium] Length = 172 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 6/150 (4%) Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPF 144 ++R + ++K +KP I + + AAS GY ISCA+N I A T+L GSIG+ Y K F Sbjct: 1 MWREVVRLKEKKPAIVSMGDYAASGGYYISCAANRIFADPTTLTGSIGIFGMMYSGEKLF 60 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEV-----NPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + LG++ VK++ M + V N ++MQ+ V+ Y FV +E R + Sbjct: 61 TETLGLNFDVVKTNKMADLGASLGPVLTRPLNASEQELMQNYVNRGYKLFVNRCAEGRKM 120 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +++GR+WTGA AK +GL+D +GG Sbjct: 121 STEAIEKVAEGRVWTGAMAKDLGLVDQLGG 150 >gi|238894259|ref|YP_002918993.1| protease 4 [Klebsiella pneumoniae NTUH-K2044] gi|238546575|dbj|BAH62926.1| protease IV, a signal peptide peptidase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 617 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 19/237 (8%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D +A I G I D +E +I D A+++ ++SPGGS A Sbjct: 322 DQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIVLRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + K KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ Sbjct: 382 EIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +GV V +SP+ A+ S + P+ Q+MQ +++ Y F+ LV+ +R + Sbjct: 442 NTLGSIGVHTDGVATSPL-ADVSSTKALPPEVQQLMQLSIENGYQRFITLVANARKSTPE 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 K ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ NY+ Sbjct: 501 KIDQIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLKTWH--LNYY 549 >gi|296282880|ref|ZP_06860878.1| periplasmic serine protease [Citromicrobium bathyomarinum JL354] Length = 628 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 1/162 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 L+V + SPGGS A EAI AI + K + PV + +AAS GY +S ++ I A Sbjct: 352 GLVVRVDSPGGSVLASEAIREAILRHKAKGIPVAVSMANVAASGGYWVSTPADRIFAEPE 411 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIG+ P + K+GVS V ++P+ +P NP+ Q++Q +++ Y Sbjct: 412 TITGSIGIFAVLPTFEKLASKVGVSADGVSTTPLSGQPDFVGGFNPETEQILQASIENGY 471 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ +V++SR + + GR+W G A++ GL+D G Sbjct: 472 DRFLGIVAKSRGKTPAQIDAIGQGRVWDGGTARQNGLVDQFG 513 >gi|152969758|ref|YP_001334867.1| protease 4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954607|gb|ABR76637.1| protease IV, a signal peptide peptidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 617 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 19/237 (8%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D +A I G I D +E +I D A+++ ++SPGGS A Sbjct: 322 DQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIVLRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + K KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ Sbjct: 382 EIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +GV V +SP+ A+ S + P+ Q+MQ +++ Y F+ LV+ +R + Sbjct: 442 NTLGSIGVHTDGVATSPL-ADVSSTKALPPEVQQLMQLSIENGYQRFITLVANARKSTPE 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 K ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ NY+ Sbjct: 501 KIDQIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLKTWH--LNYY 549 >gi|90579232|ref|ZP_01235042.1| putative protease IV [Vibrio angustum S14] gi|90440065|gb|EAS65246.1| putative protease IV [Vibrio angustum S14] Length = 615 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 17/222 (7%) Query: 22 VVYFSWSSH-VEDNSPHVARIAI---RGQIEDSQ--------ELIERIERISR-DDSATA 68 + Y+ + S V+D P ++A+ G I D + + I + R +R D+ + Sbjct: 306 ISYYDYLSMLVDDQKPSNNKVAVVVASGAIVDGKSSQGTAGGDTIAALLRKARFDNDVKS 365 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 366 VILRVDSPGGSAFASEVIRNEVDALKAAGKPVVVSMSSVAASGGYWISSSADKIIAQPTT 425 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV-QMMQDVVDSSY 186 + GSIG+ + L+KLGV V ++P + P+ V ++ Q VD+ Y Sbjct: 426 ITGSIGIFAILTTFEKSLEKLGVYSDGVGTTPFSG--VGVTRALPENVGKVFQLGVDNGY 483 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LVS+ R++ ++ ++ GR+WTG +AK+ GL+D +G Sbjct: 484 QRFIGLVSKYRHMSLEQADKIAQGRVWTGKDAKERGLVDELG 525 >gi|257076483|ref|ZP_05570844.1| putative signal peptide peptidase SppA [Ferroplasma acidarmanus fer1] Length = 239 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 4/212 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I + + AL++ ++S GG A A E ++ + K+ ++KPV + + AS Y ++C++ Sbjct: 27 IEKKNKVKALLLIINSGGGDANATEILYNQLMKISSKKPVYALIEGIGASGAYWLACSAE 86 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A TSLVGSIGV+ P FLD LG+ ++ K K SPF + + + Sbjct: 87 KIFAMRTSLVGSIGVISMSPDFSEFLDTLGIKMRINKVGKYKDINSPFRPMTEEENAIYN 146 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +++ Y F V + RN+ D ++ G +++ +AKK GLID + E V L A Sbjct: 147 NIMKDVYSVFREEVKKRRNLGEDIMEEIATGLVFSAEQAKKNGLIDGIANLETVVDELKA 206 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 SI+ + PK + L ++S ++ Sbjct: 207 KTGTNSIKNL----TPKRPFISRLMSMSFEAI 234 >gi|318605561|emb|CBY27059.1| protease IV [Yersinia enterocolitica subsp. palearctica Y11] Length = 617 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 13/236 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A S ++ Sbjct: 410 YWISTPANYIIANPSTLTGSIGIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ +R+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVASARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQ 285 + + + L K+K W + WF D +LS I + ++ M T +Q Sbjct: 529 DAVKKVAELA------KLKTW---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQ 575 >gi|251789811|ref|YP_003004532.1| signal peptide peptidase SppA, 67K type [Dickeya zeae Ech1591] gi|247538432|gb|ACT07053.1| signal peptide peptidase SppA, 67K type [Dickeya zeae Ech1591] Length = 616 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 2/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A+I+ ++SPGGS A E I + + KPV+ + MAAS GY +S +N+I Sbjct: 360 DPKVKAIILRVNSPGGSVTASELIRSELMAARQAGKPVVVSMGGMAASGGYWVSTPANVI 419 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A+ ++L GSIG+ + LD +GV V +SP+ A+ S + +A Q+MQ Sbjct: 420 IASPSTLTGSIGIFGVVTTFENALDSIGVHTDGVATSPL-ADLSQTKALPSQASQLMQIS 478 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ Y F+ LV++SR + ++ G +W G++AK GL+D +G Sbjct: 479 IERGYQNFISLVAQSRRKTTQEVDAIAQGHVWVGSDAKTNGLVDQLG 525 >gi|332161920|ref|YP_004298497.1| protease 4 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666150|gb|ADZ42794.1| protease 4 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 617 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 13/236 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A S ++ Sbjct: 410 YWISTPANYIIANPSTLTGSIGIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ +R+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVASARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQ 285 + + + L K+K W + WF D +LS I + ++ M T +Q Sbjct: 529 DAVKKVAELA------KLKTW---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQ 575 >gi|330830951|ref|YP_004393903.1| signal peptide peptidase SppA, 67K type [Aeromonas veronii B565] gi|328806087|gb|AEB51286.1| Signal peptide peptidase SppA, 67K type [Aeromonas veronii B565] Length = 614 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 20/199 (10%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 RDD A+++ + SPGGSA+A E I + +K KPV+ + AAS GY IS ++ Sbjct: 359 RDDQVKAVVLRVDSPGGSAFAAEQIRAELLALKQAGKPVVVSMGSYAASGGYWISADADK 418 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS------PMKAEPSPFSEVNPKA 174 I A+ T+L GSIGV + + L + GV V ++ P +A P Sbjct: 419 IFASPTTLTGSIGVFGMFATIDKALAQFGVHTDGVGTTDYVGVGPTRALPDHVG------ 472 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q +Q V+ +Y F+ LVS+ R + ++ ++GR+WTG +AK +GL+D G ++ Sbjct: 473 -QAIQLSVEDTYQRFIGLVSKGRGLSPEEAEKAAEGRVWTGEDAKALGLVDEFGNLDD-- 529 Query: 235 QSLYALGVDQSIRKIKDWN 253 A+ + +K+W Sbjct: 530 ----AIKAAAELANLKEWQ 544 >gi|253773279|ref|YP_003036110.1| protease 4 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161824|ref|YP_003044932.1| protease 4 [Escherichia coli B str. REL606] gi|297519580|ref|ZP_06937966.1| protease 4 [Escherichia coli OP50] gi|242377487|emb|CAQ32240.1| protease IV, subunit of protease IV, a signal peptide peptidase [Escherichia coli BL21(DE3)] gi|253324323|gb|ACT28925.1| signal peptide peptidase SppA, 67K type [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973725|gb|ACT39396.1| protease IV (signal peptide peptidase) [Escherichia coli B str. REL606] gi|253977919|gb|ACT43589.1| protease IV (signal peptide peptidase) [Escherichia coli BL21(DE3)] gi|309701988|emb|CBJ01302.1| protease IV [Escherichia coli ETEC H10407] Length = 618 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|262043079|ref|ZP_06016219.1| signal peptide peptidase SppA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039567|gb|EEW40698.1| signal peptide peptidase SppA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 617 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 19/237 (8%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D +A I G I D +E +I D A+++ ++SPGGS A Sbjct: 322 DQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIVLRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + K KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ Sbjct: 382 EIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +GV V +SP+ A+ S + P+ Q+MQ +++ Y F+ LV+ +R + Sbjct: 442 NTLGSIGVHTDGVATSPL-ADVSSTKALPPEVQQLMQLSIENGYQRFITLVANARKSTPE 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 K ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ NY+ Sbjct: 501 KIDQIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLKTWH--LNYY 549 >gi|206577621|ref|YP_002239066.1| protease 4 [Klebsiella pneumoniae 342] gi|288935968|ref|YP_003440027.1| signal peptide peptidase SppA, 67K type [Klebsiella variicola At-22] gi|290512774|ref|ZP_06552139.1| signal peptide peptidase SppA, 67K type [Klebsiella sp. 1_1_55] gi|206566679|gb|ACI08455.1| protease 4 [Klebsiella pneumoniae 342] gi|288890677|gb|ADC58995.1| signal peptide peptidase SppA, 67K type [Klebsiella variicola At-22] gi|289774657|gb|EFD82660.1| signal peptide peptidase SppA, 67K type [Klebsiella sp. 1_1_55] Length = 617 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 19/237 (8%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D +A I G I D +E +I D A+++ ++SPGGS A Sbjct: 322 DEGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIVLRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + K KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ Sbjct: 382 EIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +GV V +SP+ A+ S + P+ Q+MQ +++ Y F+ LV+ +R + Sbjct: 442 NTLGSIGVHTDGVATSPL-ADVSSTKALPPEVQQLMQLSIENGYQRFITLVANARKSTPE 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 K ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ NY+ Sbjct: 501 KIDQIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLKTWH--LNYY 549 >gi|300951371|ref|ZP_07165213.1| signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|300958660|ref|ZP_07170784.1| signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|301647962|ref|ZP_07247737.1| signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|331642370|ref|ZP_08343505.1| signal peptide peptidase SppA, 67K type [Escherichia coli H736] gi|300314711|gb|EFJ64495.1| signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|300449361|gb|EFK12981.1| signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|301073933|gb|EFK88739.1| signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|331039168|gb|EGI11388.1| signal peptide peptidase SppA, 67K type [Escherichia coli H736] Length = 666 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|198245686|ref|YP_002215831.1| protease 4 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940202|gb|ACH77535.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623578|gb|EGE29923.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 618 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RINSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|16129720|ref|NP_416280.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. MG1655] gi|89108605|ref|AP_002385.1| protease IV [Escherichia coli str. K-12 substr. W3110] gi|170081423|ref|YP_001730743.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. DH10B] gi|238900980|ref|YP_002926776.1| protease IV (signal peptide peptidase) [Escherichia coli BW2952] gi|256022570|ref|ZP_05436435.1| protease 4 [Escherichia sp. 4_1_40B] gi|307138425|ref|ZP_07497781.1| protease 4 [Escherichia coli H736] gi|34395936|sp|P08395|SPPA_ECOLI RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase gi|1742877|dbj|BAA15557.1| protease IV [Escherichia coli str. K12 substr. W3110] gi|1788064|gb|AAC74836.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. MG1655] gi|169889258|gb|ACB02965.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. DH10B] gi|238863289|gb|ACR65287.1| protease IV (signal peptide peptidase) [Escherichia coli BW2952] gi|260449112|gb|ACX39534.1| signal peptide peptidase SppA, 67K type [Escherichia coli DH1] gi|315136407|dbj|BAJ43566.1| protease 4 [Escherichia coli DH1] gi|323940567|gb|EGB36758.1| signal peptide peptidase SppA [Escherichia coli E482] Length = 618 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|123442511|ref|YP_001006488.1| protease 4 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089472|emb|CAL12320.1| protease IV [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 616 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 13/236 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A S ++ Sbjct: 410 YWISTPANYIIANPSTLTGSIGIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ +R+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQ 285 + + + L K+K W + WF D +LS I + ++ M T +Q Sbjct: 529 DAVKKVAELA------KLKTW---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQ 575 >gi|317011567|gb|ADU85314.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori SouthAfrica7] Length = 292 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS N P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSNPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVEDLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDANHYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|253572823|ref|ZP_04850222.1| protease IV [Bacteroides sp. 1_1_6] gi|251837555|gb|EES65647.1| protease IV [Bacteroides sp. 1_1_6] Length = 491 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 86/148 (58%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I + ++ D+ A+++ ++SPGGSA+A E I+ A++++K KPVI + + AAS G Sbjct: 335 KVIRDLRKLKDDEDVKAVVLRVNSPGGSAFASEQIWHAVKELKTEKPVIVSMGDYAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ISC ++ IVA T+L GSIG+ P VK +K+G++ VK++ + N Sbjct: 395 YYISCVADTIVAEPTTLTGSIGIFGMVPNVKELSEKIGLTYDVVKTNKFSDFGNIMRPFN 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +MQ ++ Y FV +E R++ Sbjct: 455 QDEKTLMQMMITQGYDTFVNRCAEGRHM 482 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ I++ +++ + + S G S + + I A+ K I + Sbjct: 84 DILSSIKKAKENENIKGIYLQASMLGTSYASLQEIRNALLDFKESGKFIIAYGDSYTQGL 143 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF +E Sbjct: 144 YYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFISTE 203 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKVGLIDVV 227 ++P + + ++S + VS SR++P D L+D + + E+ + GL D + Sbjct: 204 MSPANREQVTAFINSIWGQVTEGVSASRSLPVDSLNALADRMLMFYPAEESVQCGLADTL 263 >gi|167552353|ref|ZP_02346106.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322985|gb|EDZ10824.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 618 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RINSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|15827982|ref|NP_302245.1| protease IV, signal peptide peptidase [Mycobacterium leprae TN] gi|221230459|ref|YP_002503875.1| protease IV, signal peptide peptidase [Mycobacterium leprae Br4923] gi|2344854|emb|CAB11456.1| endopeptidase IV [Mycobacterium leprae] gi|13093535|emb|CAC30793.1| protease IV, signal peptide peptidase [Mycobacterium leprae] gi|219933566|emb|CAR71935.1| protease IV, signal peptide peptidase [Mycobacterium leprae Br4923] Length = 602 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + ++ DDS +A+++ ++SPGGS A E I+R +++ ++R KPV+ + +AAS GY +S Sbjct: 346 LREVAADDSVSAIVLRVNSPGGSVTASETIWREVKRARDRGKPVVVSMGAVAASGGYYVS 405 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA ++ GSIGV+ ++ +LGV +V+++ S P+ Sbjct: 406 VGADEIVANPGTITGSIGVITGKLVIRDLKGRLGVGSDTVRTNANADAWSANVPFTPEQH 465 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D Y F+ V+E R + D ++ GRIWTGA+A + GL+D +GG Sbjct: 466 THREAEADLCYADFLERVAEGRGMTTDAVDDVARGRIWTGADALERGLVDELGG 519 >gi|219872141|ref|YP_002476516.1| protease IV, signal peptide peptidase [Haemophilus parasuis SH0165] gi|219692345|gb|ACL33568.1| protease IV, signal peptide peptidase [Haemophilus parasuis SH0165] Length = 621 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 124/233 (53%), Gaps = 7/233 (3%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVH 104 ++ S +++ + + DD +++ ++SPGGSA A E I + ++ ++ KPV+ + Sbjct: 344 EVAGSDTIVKLLRKAREDDDVRGVVLRINSPGGSAMASELIRQEVEDLQQAGKPVVASMG 403 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 MAAS GY I+ S+ I+A+ T+L GSIG+ + KLGV+ V +SP A+ Sbjct: 404 GMAASGGYWIAATSDKIIASPTTLTGSIGIFALAVSFEKTAKKLGVNEDGVSTSPF-AQQ 462 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + ++ + +++Q +++ Y F+ LVS+ R + ++ G++W G A + GL+ Sbjct: 463 TALKPLSKEQSELIQISIENGYGRFLELVSKGRKMSKGDVDKVAQGQVWLGESAFEKGLV 522 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---WFCDLKNLSISSLLED 274 D +G ++ + +L L ++ RK K + + W D + IS ++ D Sbjct: 523 DELGDFDDAYHALTILINEK--RKAKGETEIERFSTQWLIDESDDLISQVMRD 573 >gi|194438574|ref|ZP_03070663.1| protease 4 [Escherichia coli 101-1] gi|194422584|gb|EDX38582.1| protease 4 [Escherichia coli 101-1] gi|323937024|gb|EGB33304.1| signal peptide peptidase SppA [Escherichia coli E1520] gi|323962014|gb|EGB57612.1| signal peptide peptidase SppA [Escherichia coli H489] gi|323972549|gb|EGB67753.1| signal peptide peptidase SppA [Escherichia coli TA007] Length = 622 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|89073275|ref|ZP_01159805.1| putative protease IV [Photobacterium sp. SKA34] gi|89050985|gb|EAR56449.1| putative protease IV [Photobacterium sp. SKA34] Length = 615 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 120/222 (54%), Gaps = 17/222 (7%) Query: 22 VVYFSWSSH-VEDNSP---HVARIAIRGQIEDSQ--------ELIERIERISR-DDSATA 68 + Y+ + S V+D P VA I G I D + + I + R +R D+ + Sbjct: 306 ISYYDYLSMLVDDQKPSDNKVAVIVASGAIVDGKSSQGTAGGDTIAALLRKARFDNDVKS 365 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 366 VILRVDSPGGSAFASEVIRNEVDALKAAGKPVVVSMSSVAASGGYWISSSADKIIAQPTT 425 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV-QMMQDVVDSSY 186 + GSIG+ + L+KLGV V ++P + P+ + ++ Q VD+ Y Sbjct: 426 ITGSIGIFAILTTFEKSLEKLGVYSDGVGTTPFSG--VGVTRALPENIGKVFQLGVDNGY 483 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LVS+ R++ ++ ++ GR+WTG +AK+ GL+D +G Sbjct: 484 QRFIGLVSKYRHMSLEQADKIAQGRVWTGKDAKERGLVDELG 525 >gi|330861582|emb|CBX71777.1| protease 4 [Yersinia enterocolitica W22703] Length = 510 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 13/236 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 243 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGG 302 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A S ++ Sbjct: 303 YWISTPANYIIANPSTLTGSIGIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLP 361 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ +R+ ++ ++ G +W G +AK GL+D +G + Sbjct: 362 PEFSQMMQINIENGYKTFIDLVASARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFD 421 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQ 285 + + + L K+K W + WF D +LS I + ++ M T +Q Sbjct: 422 DAVKKVAELA------KLKTW---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQ 468 >gi|321223920|gb|EFX48983.1| Protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 618 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 25/276 (9%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLETPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN-------PPKNYWFCDLKNLSISSLLEDTIPLM 279 W+ P D S+ ++L +TI M Sbjct: 544 QWHLDYYQDEPTVLDMVMDSMTGSVRAMLPETIQAM 579 >gi|154623593|dbj|BAF74800.1| protease IV homologue [Enterococcus faecium] Length = 344 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%) Query: 30 HVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSP 76 H ++ + ++++ G I D+ Q + ++++I D + +++ ++SP Sbjct: 57 HEGASNKKIVKLSVNGVIADTGESNLFSREQYTHQNFLTQLKKIQEDTALNGVLLEVNSP 116 Query: 77 GGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GG Y I + + +K P+ T + AAS GY IS + I A E + GSIGV+ Sbjct: 117 GGGIYESAEIAKEMANIKKLDIPIYTALKNTAASGGYYISAGPDKISATEETTTGSIGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 L+ LGV+ + S +K P + + + +++Q+ V S+Y FV +V++ Sbjct: 177 ISGLNYSGLLENLGVTDATYTSRALKDMMPPQHKPSEEENKVIQEFVMSAYDRFVNVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 RN+ + L+DGRI+ G +A + GL+D +G E+ SL Sbjct: 237 GRNMDTNAVKELADGRIYDGNQAVENGLVDQIGYSEDALDSL 278 >gi|308185198|ref|YP_003929331.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori SJM180] gi|308061118|gb|ADO03014.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori SJM180] Length = 292 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS N P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSNPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|260597600|ref|YP_003210171.1| protease 4 [Cronobacter turicensis z3032] gi|260216777|emb|CBA30223.1| Protease 4 [Cronobacter turicensis z3032] Length = 616 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 2/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A+++ ++SPGGS A E I + + K KP++ + MAAS GY IS ++ I Sbjct: 360 DPKVKAIVLRVNSPGGSVTASETIRQELAAAKEAGKPIVVSMGGMAASGGYWISTPASYI 419 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++L GSIG+ V+ LD +GV V +SP+ A+ S + P+ ++MQ Sbjct: 420 VANPSTLTGSIGIFGVINTVENSLDSIGVHTDGVATSPL-ADVSVTKALPPEVQKLMQLT 478 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++ Y F+ LV++SR+ + ++ G +WTG +AK+ GL+D +G Sbjct: 479 IENGYQRFIGLVAQSRHKTPQQIDQIAQGHVWTGEDAKQNGLVDSLG 525 >gi|301020953|ref|ZP_07185005.1| signal peptide peptidase SppA [Escherichia coli MS 196-1] gi|299881708|gb|EFI89919.1| signal peptide peptidase SppA [Escherichia coli MS 196-1] Length = 622 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 327 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 387 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 447 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 505 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 506 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 550 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 103 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 162 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 163 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 222 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 223 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 282 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 283 NKLVDALASSAEIEKAL 299 >gi|333018733|gb|EGK38026.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-227] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + K V+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLNVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|291617657|ref|YP_003520399.1| SppA [Pantoea ananatis LMG 20103] gi|291152687|gb|ADD77271.1| SppA [Pantoea ananatis LMG 20103] Length = 624 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAI- 86 ++A I G I D E +I D A+I+ ++SPGGS A EAI Sbjct: 333 NIAVIMASGAIMDGDETPGNVGGDTTAAQIRDARLDPKIKAIILRVNSPGGSVTASEAIR 392 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 KP++ + MAAS GY IS ++ I+A+ ++L GSIG+ ++ L Sbjct: 393 AELAAAKAAGKPIVVSMGGMAASGGYWISTPASYIIASPSTLTGSIGIFGVINTLENSLA 452 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ + + P+ Q+MQ +++ YH FV LV+ SR+ ++ Sbjct: 453 SIGVHTDGVATSPL-ADVASTKALPPEVQQLMQLTIENGYHNFVGLVAASRHKTPEQIDA 511 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG++AK GL+D +G Sbjct: 512 IAQGHVWTGSDAKANGLVDALG 533 >gi|229543532|ref|ZP_04432592.1| signal peptide peptidase SppA, 36K type [Bacillus coagulans 36D1] gi|229327952|gb|EEN93627.1| signal peptide peptidase SppA, 36K type [Bacillus coagulans 36D1] Length = 338 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 97/182 (53%), Gaps = 2/182 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEM 106 + Q +E +++ +D +I+ ++SPGG I + ++K +K + + Sbjct: 87 NHQSFLEELDQAKKDSDVKGIILHINSPGGGVAESAEIHHHLMEIKKDTKKKIYVSMGPT 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS Y IS +N I A+ +L GS+GV+ + K G+ +KS K SP Sbjct: 147 CASGAYYISTPANKIFASPETLTGSLGVIMESVNYGKLAKKYGIDFPVIKSGEYKDIMSP 206 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++ +M+Q +V++SY+ FV+++SE R+IP ++ ++DGR++ G +A + LID Sbjct: 207 YRDMTKSEKEMLQKMVNNSYNGFVKVISEGRHIPKEQVRKIADGRVYDGKQALDLHLIDK 266 Query: 227 VG 228 G Sbjct: 267 YG 268 >gi|158312662|ref|YP_001505170.1| signal peptide peptidase SppA, 36K type [Frankia sp. EAN1pec] gi|158108067|gb|ABW10264.1| signal peptide peptidase SppA, 36K type [Frankia sp. EAN1pec] Length = 651 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 1/169 (0%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 RD S A + + SPGGS A + + R I++ ++ +PV+ + +AAS GY ++ A ++ Sbjct: 386 RDPSVAAAVFRVESPGGSYVASDVVRREIERFRSTGRPVVVSMGSVAASGGYFVALAGDV 445 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +L GSIGV V+ DK+G+ +V + SP + + Sbjct: 446 IVANPGTLTGSIGVFGGKQVVRDLFDKVGIGFGAVAAGENALMMSPRQPFTQAGRAKLDE 505 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +D Y FV V+++R + + L+ GR+WTGA+A + GL+D +GG Sbjct: 506 FLDRVYADFVDKVAQARRMSHGDAHELARGRVWTGADAHRHGLVDELGG 554 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 2/126 (1%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ++CA + I A +G GV + P+V+ LD+LGV+++ + K + E + Sbjct: 120 YYLACAFDEIWLAPPGDLGLTGVAMETPFVRDALDRLGVTVEIGQRHEYKNAVNTLVERD 179 Query: 172 --PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 P + + +VDSS V +++SR + D+ + D G A GL+D +G Sbjct: 180 FTPAHREALARIVDSSAEQIVAGIAQSRGLSADQVRRMIDIAPLAGHVALSAGLVDRIGY 239 Query: 230 QEEVWQ 235 ++E+++ Sbjct: 240 RDEIYE 245 >gi|300930753|ref|ZP_07146126.1| signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300461386|gb|EFK24879.1| signal peptide peptidase SppA [Escherichia coli MS 187-1] Length = 666 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 371 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 430 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 431 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 490 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 491 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLNIENGYKRFITLVADARHSTPE 549 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 550 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 594 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 147 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 206 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 207 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 266 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 267 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 326 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 327 NKLVDALASSAEIEKAL 343 >gi|62179887|ref|YP_216304.1| protease 4 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127520|gb|AAX65223.1| protease IV, a signal peptide peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|327394084|dbj|BAK11506.1| protease IV SppA [Pantoea ananatis AJ13355] Length = 624 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAI- 86 ++A I G I D E +I D A+I+ ++SPGGS A EAI Sbjct: 333 NIAVIMASGAIMDGDETPGNVGGDTTAAQIRDARLDPKIKAIILRVNSPGGSVTASEAIR 392 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 KP++ + MAAS GY IS ++ I+A+ ++L GSIG+ ++ L Sbjct: 393 AELAAAKAAGKPIVVSMGGMAASGGYWISTPASYIIASPSTLTGSIGIFGVINTLENSLA 452 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ + + P+ Q+MQ +++ YH FV LV+ SR+ ++ Sbjct: 453 SIGVHTDGVATSPL-ADVASTKALPPEVQQLMQLTIENGYHNFVGLVAASRHKTPEQIDA 511 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG++AK GL+D +G Sbjct: 512 IAQGHVWTGSDAKANGLVDALG 533 >gi|255594924|ref|XP_002536196.1| Protease, putative [Ricinus communis] gi|223520527|gb|EEF26187.1| Protease, putative [Ricinus communis] Length = 572 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 12/211 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L + + + DD A+++ + S GGSA+A E I + + +++ KPV+ + +AAS G Sbjct: 300 LSDLLRQARDDDDVKAVVLRVDSEGGSAFASEIIRQQLLELQAADKPVVVSMGSVAASGG 359 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +++ + A ++ GSIG+ +P V L KLGV V ++ + V+ Sbjct: 360 YWISASADEVWATPATITGSIGIFGAFPTVDKSLAKLGVHTDGVGTTAIADAFRVDRPVS 419 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P +Q +++ Y F+ +V+E R + + G++W G++A+++GL+D +GG E Sbjct: 420 PAVAGAIQSGIEAGYQRFLTVVAEGREMDKAAVDKIGQGQVWAGSDAQRIGLVDHLGGLE 479 Query: 232 EVWQSLYALGVDQSIRKIKDWN-----PPKN 257 + A+G + ++KD+ PP++ Sbjct: 480 D------AVGAAAKLAELKDYQQELIEPPRS 504 >gi|270262164|ref|ZP_06190436.1| protease 4 [Serratia odorifera 4Rx13] gi|270044040|gb|EFA17132.1| protease 4 [Serratia odorifera 4Rx13] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 11/206 (5%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D S A++ ++SPGGS A E I + V+ KPV+ + MAAS GY +S ++ I Sbjct: 362 DPSIKAVVFRVNSPGGSVSASEVIRSELAAVRAAGKPVVVSMGGMAASGGYWVSTPADYI 421 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A+ ++L GSIG+ + LD +GV V +SP+ A+ + + P+ QMMQ Sbjct: 422 IASPSTLTGSIGIFGVINTYEQTLDSIGVHTDGVATSPL-ADLAVTKALPPEFSQMMQLN 480 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +++ Y F+ LV++SR + + ++ G +W G++AK GL+D +G ++ + L Sbjct: 481 IENGYKNFIDLVAKSRKMTPQQVDQIAQGHVWLGSDAKANGLVDQLGDFDDAVKKAAELA 540 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLS 267 K+K W + WF D +L+ Sbjct: 541 ------KLKQW---QLNWFVDTPSLT 557 >gi|168244402|ref|ZP_02669334.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449756|ref|YP_002045301.1| protease 4 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408060|gb|ACF68279.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336810|gb|EDZ23574.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 25/276 (9%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN-------PPKNYWFCDLKNLSISSLLEDTIPLM 279 W+ P D S+ ++L +TI M Sbjct: 544 QWHLDYYQDEPTVLDMVMDSMTGSVRAMLPETIQAM 579 >gi|30062971|ref|NP_837142.1| protease 4 [Shigella flexneri 2a str. 2457T] gi|56479902|ref|NP_707347.2| protease 4 [Shigella flexneri 2a str. 301] gi|110805427|ref|YP_688947.1| protease 4 [Shigella flexneri 5 str. 8401] gi|30041220|gb|AAP16949.1| protease IV, a signal peptide peptidase [Shigella flexneri 2a str. 2457T] gi|56383453|gb|AAN43054.2| protease IV, a signal peptide peptidase [Shigella flexneri 2a str. 301] gi|110614975|gb|ABF03642.1| protease IV, a signal peptide peptidase [Shigella flexneri 5 str. 8401] gi|281600872|gb|ADA73856.1| putative Periplasmic serine proteases (ClpP class) [Shigella flexneri 2002017] gi|313649199|gb|EFS13633.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 2a str. 2457T] gi|332758842|gb|EGJ89157.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 2747-71] gi|332759159|gb|EGJ89468.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-671] gi|332767154|gb|EGJ97349.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 2930-71] gi|333003711|gb|EGK23247.1| signal peptide peptidase SppA, 67K type [Shigella flexneri VA-6] gi|333004305|gb|EGK23836.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-218] gi|333018322|gb|EGK37621.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-304] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + K V+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|322616683|gb|EFY13592.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619801|gb|EFY16675.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622369|gb|EFY19214.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627893|gb|EFY24683.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633009|gb|EFY29752.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636745|gb|EFY33448.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641229|gb|EFY37870.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645218|gb|EFY41747.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650160|gb|EFY46574.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655734|gb|EFY52036.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660059|gb|EFY56298.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665374|gb|EFY61562.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669639|gb|EFY65786.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673558|gb|EFY69660.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677484|gb|EFY73548.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679851|gb|EFY75890.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687323|gb|EFY83295.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192441|gb|EFZ77671.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199518|gb|EFZ84611.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204132|gb|EFZ89146.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208750|gb|EFZ93688.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210920|gb|EFZ95784.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217726|gb|EGA02441.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220281|gb|EGA04736.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223877|gb|EGA08177.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229529|gb|EGA13652.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232752|gb|EGA16848.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240209|gb|EGA24253.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242803|gb|EGA26824.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249119|gb|EGA33038.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254380|gb|EGA38197.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257169|gb|EGA40872.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263510|gb|EGA47038.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267077|gb|EGA50562.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272181|gb|EGA55595.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|161614303|ref|YP_001588268.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363667|gb|ABX67435.1| hypothetical protein SPAB_02048 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|34557816|ref|NP_907631.1| protease IV (PspA) [Wolinella succinogenes DSM 1740] gi|34483534|emb|CAE10531.1| PROTEASE IV (PSPA) [Wolinella succinogenes] Length = 290 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 6/278 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +EFV + K +L LV + ++ + N ++A I+++G I + +E +ERI Sbjct: 16 LEFVTRYFKA---LLFLVIVVWIFGANEGSSAINETNLAEISLKGAILNPDSFLEELERI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 +++ + SPGG+ I I+++ + PV+ + AS GY S Sbjct: 73 ESLPRLAGVLLVVDSPGGAIAPSVEISEEIKRLSAKVPVVVYAQGVMASGGYYAGIWSKR 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A + SL+GSIGV+F V K+G+ +++K+ K + N ++ Sbjct: 133 IIANKGSLIGSIGVIFNGADVSELASKIGIKTQTIKAGKYKEAGTFMRPWNEDEEGEIKR 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V Y FV V+E+R + + + + ++GR+++ EA ++GLID +G + + ++L L Sbjct: 193 LVRKQYEMFVLDVAEARGLDQEVSPLYAEGRVFSATEALELGLIDQIGIKSDAKRALEEL 252 Query: 241 -GVDQSIRKIKD-WNPPKNYWFCDLKNLSISSLLEDTI 276 GV + + K+ W W L +S+LL I Sbjct: 253 SGVKEPLWLQKEPWEKYMERWMSQ-ATLQLSTLLASGI 289 >gi|168233210|ref|ZP_02658268.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469685|ref|ZP_03075669.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|200389848|ref|ZP_03216459.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194456049|gb|EDX44888.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|199602293|gb|EDZ00839.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205332636|gb|EDZ19400.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|16764646|ref|NP_460261.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991889|ref|ZP_02572988.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262148|ref|ZP_03162222.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16419812|gb|AAL20220.1| protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240403|gb|EDY23023.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329812|gb|EDZ16576.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246504|emb|CBG24314.1| protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993167|gb|ACY88052.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157832|emb|CBW17326.1| protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912281|dbj|BAJ36255.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323129566|gb|ADX16996.1| signal peptide peptidase SppA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988183|gb|AEF07166.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 25/276 (9%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN-------PPKNYWFCDLKNLSISSLLEDTIPLM 279 W+ P D S+ ++L +TI M Sbjct: 544 QWHLDYYQDEPTVLDMVMDSMTGSVRAMLPETIQAM 579 >gi|333006817|gb|EGK26314.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-272] Length = 614 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 319 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 378 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + K V+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 379 EVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 438 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 439 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 498 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 542 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 95 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 154 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 155 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLNVSTHVFRVGTYKSAVEPFIRD 214 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 215 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 274 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 275 NKLVDALASSAEIEKAL 291 >gi|168263890|ref|ZP_02685863.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347569|gb|EDZ34200.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 25/276 (9%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN-------PPKNYWFCDLKNLSISSLLEDTIPLM 279 W+ P D S+ ++L +TI M Sbjct: 544 QWHLDYYQDEPTVLDMVMDSMTGSVRAMLPETIQAM 579 >gi|213427777|ref|ZP_03360527.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|224584189|ref|YP_002637987.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468716|gb|ACN46546.1| protease IV [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322714354|gb|EFZ05925.1| protease IV [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|16760600|ref|NP_456217.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141640|ref|NP_804982.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413719|ref|YP_150794.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168463310|ref|ZP_02697241.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821937|ref|ZP_02833937.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443380|ref|YP_002040552.1| protease 4 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197250444|ref|YP_002146744.1| protease 4 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362642|ref|YP_002142279.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|207857196|ref|YP_002243847.1| protease 4 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213028304|ref|ZP_03342751.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213162980|ref|ZP_03348690.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213647253|ref|ZP_03377306.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850391|ref|ZP_03381289.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238910887|ref|ZP_04654724.1| protease 4 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829513|ref|ZP_06547115.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81514303|sp|Q8Z6F3|SPPA_SALTI RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase gi|25290100|pir||AB0711 protease IV (EC 3.4.21.-) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502896|emb|CAD02059.1| protease IV [Salmonella enterica subsp. enterica serovar Typhi] gi|29137268|gb|AAO68831.1| protease IV [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127976|gb|AAV77482.1| protease IV [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194402043|gb|ACF62265.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195634238|gb|EDX52590.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094119|emb|CAR59619.1| protease IV [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214147|gb|ACH51544.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205341603|gb|EDZ28367.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708999|emb|CAR33329.1| protease IV [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320086223|emb|CBY95997.1| protease IV [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 618 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|328474533|gb|EGF45338.1| protease IV [Vibrio parahaemolyticus 10329] Length = 616 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQE--------LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + R +R+D A+++ + SPGGSA+A E I Sbjct: 327 IAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKKAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q Q ++ Y F+ LV +R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDGIT-TGLSEGASQAFQLGIEHGYKRFISLVGSNRDMTVEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + GR+WTG +A GL+D +G Sbjct: 506 AQGRVWTGQDALSFGLVDQMG 526 >gi|86742603|ref|YP_483003.1| signal peptide peptidase A [Frankia sp. CcI3] gi|86569465|gb|ABD13274.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Frankia sp. CcI3] Length = 682 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 1/161 (0%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 + +SSPGGS A + + R ++ + + +P+I + ++AAS GY ++ AS+ IVA +L Sbjct: 410 VFRVSSPGGSYVASDLVRREAERFRASGRPLIVSMGDVAASGGYFVALASDAIVANPGTL 469 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV + LDK+GV +V SP P + +++ +D Y Sbjct: 470 TGSIGVFAGKQVISGLLDKVGVGFGAVAEGEHALMMSPRRPFTPGEREKLEEFLDRVYAD 529 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 FV V+ +R + D+ L+ GR+WTGA+A GL+DV+GG Sbjct: 530 FVDKVAVARGLSRDQAHQLARGRVWTGADAHAHGLVDVLGG 570 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 +A Y ++CA + I A G G+ + P+++ LD+LG+S++ + K + Sbjct: 115 GGTAPYYLACAFDEIWLAPPGDCGLTGLGMEAPFLRGALDRLGISVEIGQRYEYKNAVNT 174 Query: 167 FSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 E P ++ + +++SS V ++E R + D+ L D G+ A GL+ Sbjct: 175 LVERDFTPAHLEAVSRIIESSSDQIVAGIAEGRGLSTDRVRRLIDLGPLAGSVALDTGLV 234 Query: 225 DVVGGQEEVWQS 236 D +G ++EV+ + Sbjct: 235 DRLGYRDEVYAA 246 >gi|308062696|gb|ADO04584.1| protease IV (PspA) [Helicobacter pylori Cuz20] Length = 292 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESTPSEPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y +N Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQANE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|111225578|ref|YP_716372.1| endopeptidase IV [Frankia alni ACN14a] gi|111153110|emb|CAJ64857.1| Endopeptidase IV (Protease IV, signal peptide peptidase) [Frankia alni ACN14a] Length = 772 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 1/169 (0%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNI 120 RD+ A + ++SPGGS A + + R ++ + + +P++ + ++AAS GY +S A+++ Sbjct: 459 RDEDVAAAVFRVNSPGGSYVASDLVRREAERFRASGRPLVVSMGDVAASGGYFVSLAADL 518 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +L GSIGV V+ LDK+GV +V SP + +++ Sbjct: 519 IVANPGTLTGSIGVFAGKQVVRELLDKVGVGFGAVAEGEHALMMSPRRPFTVGEREKLEE 578 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +D Y FV V+ +R + D+ L+ GR+WTGA+A GL+D +GG Sbjct: 579 FLDRVYADFVDKVAAARRLTRDQVHELARGRVWTGADAHAYGLVDELGG 627 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 2/125 (1%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ++CA + I A + G G+ + P+++ LD+LGV+++ + K + E + Sbjct: 120 YYLACAFDEIWLAPSGDCGLTGLGMETPFLRGALDRLGVAVEIGQRYEYKNAVNTLVERD 179 Query: 172 --PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 P ++ + +++SS V +++ R +P D+ L D G+ A VGL+D +G Sbjct: 180 FTPAHLEAVSRIIESSSEQVVAGIAQGRRMPADRVRRLIDLGPLAGSVALDVGLVDRLGY 239 Query: 230 QEEVW 234 ++EV+ Sbjct: 240 RDEVY 244 >gi|28898926|ref|NP_798531.1| protease IV [Vibrio parahaemolyticus RIMD 2210633] gi|153838581|ref|ZP_01991248.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ3810] gi|260363623|ref|ZP_05776430.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus K5030] gi|260878875|ref|ZP_05891230.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AN-5034] gi|260896203|ref|ZP_05904699.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus Peru-466] gi|260900719|ref|ZP_05909114.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ4037] gi|28807145|dbj|BAC60415.1| protease IV [Vibrio parahaemolyticus RIMD 2210633] gi|149748046|gb|EDM58905.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ3810] gi|308088812|gb|EFO38507.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus Peru-466] gi|308094244|gb|EFO43939.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AN-5034] gi|308109743|gb|EFO47283.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ4037] gi|308115086|gb|EFO52626.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus K5030] Length = 616 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQE--------LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + R +R+D A+++ + SPGGSA+A E I Sbjct: 327 IAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKKAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q Q ++ Y F+ LV +R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDGIT-TGLSEGASQAFQLGIEHGYKRFISLVGSNRDMTVEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + GR+WTG +A GL+D +G Sbjct: 506 AQGRVWTGQDALSFGLVDQMG 526 >gi|324113514|gb|EGC07489.1| signal peptide peptidase SppA [Escherichia fergusonii B253] Length = 618 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 15/221 (6%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A+++ ++SPGGS A E I + K KPV+ + MAAS GY IS +N I Sbjct: 362 DPKVKAIVLRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYI 421 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A ++L GSIG+ V+ LD +GV V +SP+ A S + + QMMQ Sbjct: 422 IANPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPL-ANMSVTQSLPTEVQQMMQLS 480 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ Sbjct: 481 IENGYKRFITLVADARKSTPEQVDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVA 534 Query: 242 VDQSIRKIKDWNPPKNYW-----FCDLKNLSISSLLEDTIP 277 + K+K W+ NY+ F D+ S+S + +P Sbjct: 535 KAAELAKLKQWS--INYYQDEPTFFDMVVDSMSGSVRAMLP 573 >gi|238797349|ref|ZP_04640849.1| Protease 4 [Yersinia mollaretii ATCC 43969] gi|238718780|gb|EEQ10596.1| Protease 4 [Yersinia mollaretii ATCC 43969] Length = 598 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 23/222 (10%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ +KP++ + MAAS G Sbjct: 332 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRSELSALRAAKKPLVVSMGGMAASGG 391 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPS 165 Y IS +N IVA+ ++L GSIG+ + L+ +GV V +SP+ K PS Sbjct: 392 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLESIGVHTDGVATSPLADISITKDLPS 451 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 FS QMMQ +++ Y FV LV+ SR+ ++ ++ G +W G +AK GL+D Sbjct: 452 EFS-------QMMQINIENGYKTFVDLVATSRHKTPEQVDQIAQGHVWIGFDAKNNGLVD 504 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 +G ++ + + L ++K W + WF D +LS Sbjct: 505 QLGDFDDAVKKVAELA------QLKTW---QLNWFIDEPSLS 537 >gi|92113719|ref|YP_573647.1| signal peptide peptidase SppA, 36K type [Chromohalobacter salexigens DSM 3043] gi|91796809|gb|ABE58948.1| signal peptide peptidase SppA, 36K type [Chromohalobacter salexigens DSM 3043] Length = 357 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 13/232 (5%) Query: 7 KIKTRYVMLSLV------TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-IERIER 59 K+ R+V +L+ T V+F+ PH+ + ++G I+ E ERI Sbjct: 69 KLFFRFVFAALIAASLAMTTYAVFFAGRDMTGAAGPHLGVVEVQGVIDAQGEASAERIIE 128 Query: 60 ISRDD----SATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYL 113 RD S+ +++ ++SPGGS + ++ ++++ + KPV+ + ++ AS Y Sbjct: 129 GLRDAWKAPSSRGVVLHINSPGGSPVQSQRVYDEVRRLAAQGDKPVVAVIEDIGASGAYY 188 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 ++ A++ I A+ SLVGSIGV++ ++ +DK+GV + S KA PFS + + Sbjct: 189 MASAADDIYASPASLVGSIGVIYSGFGLQEAIDKVGVERRVFTSGDNKAFLDPFSPIRDE 248 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q V+D+++ F+ V R D L G IWTG +A +GL+D Sbjct: 249 QRAFWQTVLDTTHRQFIDDVKAGRGERLDDDPRLFSGLIWTGEQALGLGLVD 300 >gi|204927902|ref|ZP_03219103.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323244|gb|EDZ08440.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 618 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|168238961|ref|ZP_02664019.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736488|ref|YP_002114312.1| protease 4 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711990|gb|ACF91211.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288303|gb|EDY27688.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 618 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D S T +++ L + G + I +A+++ ++ I V E + Sbjct: 99 DIVNAIRQAKDDRSITGIVLDLKNFTGADQPSMRYIGKALREFRDSGKPIFAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ VS +R I S +++ GA+A GL V G Sbjct: 219 DMSPAAREADSHWIGELWQNYLHTVSANRQI--------SPQQLFPGAQAIIDGLTSVGG 270 >gi|138896331|ref|YP_001126784.1| Signal peptide peptidase [Geobacillus thermodenitrificans NG80-2] gi|134267844|gb|ABO68039.1| Signal peptide peptidase [Geobacillus thermodenitrificans NG80-2] Length = 341 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 19/228 (8%) Query: 20 LTVVYFSWSSHV-EDNSP--HVARIAIRGQIEDS--------------QELIERIERISR 62 L+++ S+S V ED P + + + G IED+ Q ++ I+++ Sbjct: 47 LSLMEDSFSEEVIEDGDPLKKIVVLEVNGVIEDTGEAETFFSSSFYNHQAFLKMIKQVKE 106 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFR--AIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 DDS A+++ ++SPGG + K + +KP+ + MAAS GY I+ A + Sbjct: 107 DDSVKAIVLRINSPGGGVVESAEVHNQLLKLKKETKKPIYVSMGAMAASGGYYIATAGDK 166 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A+ ++ GSIGV+ Q + K GV + ++KS P K +P ++ +++Q Sbjct: 167 LFASPETITGSIGVIMQSINYEGLAKKYGVELVTIKSGPYKDIMNPARKMTDAEQEILQR 226 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++ SY FV ++ E R + + L+DGRI+ G +AK + LID G Sbjct: 227 LINQSYEGFVDVIVEGRKLSEEAVRKLADGRIYNGRQAKALQLIDEFG 274 >gi|161525359|ref|YP_001580371.1| peptidase S49 [Burkholderia multivorans ATCC 17616] gi|189349904|ref|YP_001945532.1| protease IV [Burkholderia multivorans ATCC 17616] gi|160342788|gb|ABX15874.1| peptidase S49 [Burkholderia multivorans ATCC 17616] gi|189333926|dbj|BAG42996.1| protease IV [Burkholderia multivorans ATCC 17616] Length = 330 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L+ L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLAVFLLLAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFEDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDSVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|317492301|ref|ZP_07950730.1| signal peptide peptidase SppA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919640|gb|EFV40970.1| signal peptide peptidase SppA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 443 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 14/168 (8%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ ++SPGGS A E I + + KPV+ + +AAS GY IS ++ IVA+ + Sbjct: 192 AIVLRVNSPGGSVSASEVIRSELAAARAAGKPVVVSMGGLAASGGYWISTPADYIVASPS 251 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPSPFSEVNPKAVQMMQD 180 +L GSIG+ + LD +GV V +SP+ K P FS QMMQ Sbjct: 252 TLTGSIGIFGVINTFENTLDSIGVHTDGVATSPLADLTVTKPLPEAFS-------QMMQI 304 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++ Y+ F+ LV+++RN ++ ++ GR+W G++AKK GL+D +G Sbjct: 305 NIENGYNNFINLVAKARNKTPEQVDAIAQGRVWLGSDAKKNGLVDQLG 352 >gi|218548665|ref|YP_002382456.1| protease 4 [Escherichia fergusonii ATCC 35469] gi|218356206|emb|CAQ88823.1| protease IV (signal peptide peptidase) [Escherichia fergusonii ATCC 35469] Length = 711 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 15/221 (6%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A+++ ++SPGGS A E I + K KPV+ + MAAS GY IS +N I Sbjct: 455 DPKVKAIVLRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYI 514 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A ++L GSIG+ V+ LD +GV V +SP+ A S + + QMMQ Sbjct: 515 IANPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPL-ANMSVTQSLPTEVQQMMQLS 573 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ Sbjct: 574 IENGYKRFITLVADARKSTPEQVDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVA 627 Query: 242 VDQSIRKIKDWNPPKNYW-----FCDLKNLSISSLLEDTIP 277 + K+K W+ NY+ F D+ S+S + +P Sbjct: 628 KAAELAKLKQWS--INYYQDEPTFFDMVVDSMSGSVRAMLP 666 >gi|158521750|ref|YP_001529620.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] gi|158510576|gb|ABW67543.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] Length = 319 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 17/219 (7%) Query: 31 VEDNSPH-VARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSS 75 +E + P +A +++ G I D E + ++ D S AL++ ++S Sbjct: 26 LEGSGPQKIAMVSVNGAITDKPTRDFMSRNHPGMLDEFVAQLALAKEDPSIKALVLKVNS 85 Query: 76 PGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG+ A + +++ + K + KPV+ + ++AAS GY IS ++ I+A T+L GS+G Sbjct: 86 PGGTITASDIMYKELMDFKQQTGKPVVAALMDVAASGGYYISLPADHILAHPTTLTGSVG 145 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+F P V +DKLG+ +K KS K SPF + + + ++D F LV Sbjct: 146 VIFVTPRVSGLMDKLGLDMKIRKSGKHKDMGSPFRDTTAEEDALFDGIIDDMAGRFAGLV 205 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + R + RI+T +A GL+D VG E+ Sbjct: 206 EKHRADQKPDMEKIKTARIFTADDALSAGLVDQVGYLED 244 >gi|310825614|ref|YP_003957972.1| Signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|309398686|gb|ADO76145.1| Signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] Length = 598 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + S D A++ + SPGGS A + + R +Q+ + + KPVI + AAS GY +S Sbjct: 328 LRKASEDKEVKAILFRVDSPGGSYVASDTVRREVQRAREKGKPVIVSMATYAASGGYFVS 387 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA +L GSIGV F KLG++ +++ S S+ P+ Sbjct: 388 MGADKIVAQPGTLTGSIGVYGGKMVTADFWAKLGINFETISLGKDATLYSTDSDFTPEQQ 447 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +D Y F + +E R++P +K ++ GR+WTG +AK++GL+D +GG Sbjct: 448 AKNDASLDRVYTDFTQKAAEGRHLPLEKLQAVARGRVWTGEDAKELGLVDELGG 501 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 6/181 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE--AIFRAIQKVKNRKPVITEVHEMAA 108 ++++E +E+ ++D +L+V + PGG A A E +A + + T+ Sbjct: 72 RDVVEALEKAAQDKRVKSLLVHIDQPGGVAVAQELRDAVKAFRASGKKAVAFTDTFGEGG 131 Query: 109 SA--GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 SA Y ++ A + I + V G+ + P+ + KLGV + + K + Sbjct: 132 SATGAYYLATAFDEIYIQPSGDVTLTGIAMETPFARDAFAKLGVQPRIGQRYEYKNAVNT 191 Query: 167 FSEVNPKAV--QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 ++E A + + + S + VR ++E R + D+ L D G A + L+ Sbjct: 192 YTEQGYTAAHREATEKFLGSLFGQLVRGIAEGRKLSEDEVKGLIDRAPLLGQAALEAKLV 251 Query: 225 D 225 D Sbjct: 252 D 252 >gi|253827669|ref|ZP_04870554.1| protease IV [Helicobacter canadensis MIT 98-5491] gi|253511075|gb|EES89734.1| protease IV [Helicobacter canadensis MIT 98-5491] Length = 277 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 118/231 (51%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 L + + V+ F SS + +VARI ++G I S +E + ++ + + +++ + Sbjct: 7 LVFLLIVVLIFMPSSSENSSLANVARIDLKGMIIQSDSFLEELSKLENNPNIKGVLLVID 66 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG+ I A+++++++KP++ AS YL ++ I+A + +LVGSIGV Sbjct: 67 SPGGTIPPSVEISEAVKRMRSKKPIVAYAQGSMASGSYLAGVWADRIIANKGALVGSIGV 126 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + V +KLG+ + +K+ K + N +M++ ++ Y FV V Sbjct: 127 ILNGVDVSELAEKLGIKTQILKAGIYKEAGTFMRPWNQAEEEMLKGLIKEQYEMFVSEVV 186 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 +RN+ K + GR+++ + A K+GL+D + E ++L+ L Q+ Sbjct: 187 AARNLEITKEGEFAQGRVFSASNALKLGLVDSISSIYEAQKTLFELAKIQN 237 >gi|294054568|ref|YP_003548226.1| signal peptide peptidase SppA, 67K type [Coraliomargarita akajimensis DSM 45221] gi|293613901|gb|ADE54056.1| signal peptide peptidase SppA, 67K type [Coraliomargarita akajimensis DSM 45221] Length = 603 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 94/177 (53%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L + + R+ D A+++ ++SPGGSA A E I R +++ KP+I + AAS GY Sbjct: 342 LAQELRRLRNDSEVKAVVLRVNSPGGSAVASEIIQRETRRLAAEKPLIVSMGSYAASGGY 401 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS ++ IVA ++ GSIGV ++ KL + VK++P S Sbjct: 402 WISAYADSIVAQPYTITGSIGVFGLVFNIQEAAAKLAIQFDGVKTAPFADIHSLSRPRTE 461 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + ++Q D Y FV V++ R + K L++GR+W+G A+++ L+D +GG Sbjct: 462 EEMALIQQFTDEIYTAFVDRVADGRALETSKVRELAEGRVWSGLRAQQLALVDHIGG 518 >gi|325497076|gb|EGC94935.1| protease 4 [Escherichia fergusonii ECD227] Length = 594 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 15/221 (6%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A+++ ++SPGGS A E I + K KPV+ + MAAS GY IS +N I Sbjct: 338 DPKVKAIVLRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYI 397 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A ++L GSIG+ V+ LD +GV V +SP+ A S + + QMMQ Sbjct: 398 IANPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPL-ANMSVTQSLPTEVQQMMQLS 456 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ Sbjct: 457 IENGYKRFITLVADARKSTPEQVDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVA 510 Query: 242 VDQSIRKIKDWNPPKNYW-----FCDLKNLSISSLLEDTIP 277 + K+K W+ NY+ F D+ S+S + +P Sbjct: 511 KAAELAKLKQWS--INYYQDEPTFFDMVVDSMSGSVRAMLP 549 >gi|282879549|ref|ZP_06288280.1| signal peptide peptidase SppA, 67K type [Prevotella timonensis CRIS 5C-B1] gi|281306497|gb|EFA98526.1| signal peptide peptidase SppA, 67K type [Prevotella timonensis CRIS 5C-B1] Length = 589 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 1/163 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++S GGSAYA E ++ I ++K +KPV+ + MAAS GY +SC +N IVA T+ Sbjct: 347 GVVLRINSGGGSAYASEQMWHQIAELKKKKPVVVSMGGMAASGGYYMSCNANWIVAQPTT 406 Query: 128 LVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 L GSIG+ P L KLG+ VK++ S +N + + + +D Y Sbjct: 407 LTGSIGIFGMIPDRSQLLTQKLGIKFDEVKTNRNALMGSNARPMNEEEIGYLTRYIDRGY 466 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + F + V++ R + ++ ++ G ++ G +A K+ L+D +GG Sbjct: 467 NLFRKRVADGRKMSINQVEEIAQGHVFLGQDALKIKLVDELGG 509 >gi|33863632|ref|NP_895192.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9313] gi|33635215|emb|CAE21540.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9313] Length = 270 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 2/223 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ + I A+ +++ + V+ ++AS G + A+ IVA Sbjct: 44 ALLLRIDSPGGTVGDSQEIHAALLRLREKGCHVVASFGNVSASGGVYVGVAAEKIVANPG 103 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ + + L+++G+ ++VKS K SP + + Q++Q ++DSSY Sbjct: 104 TITGSIGVILRGNNLSKLLERIGIRFETVKSGTYKDILSPDRALTAEERQLLQSLIDSSY 163 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQS 245 FV V+E R++ ++ +DGR+++G +A ++GL+D +G +E + L +D++ Sbjct: 164 EQFVNAVAEGRHLSAEEVRNFADGRVFSGTQAHELGLVDELGDEEHARKLAAKLADLDEA 223 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + PK L + S L + + L Q LW Sbjct: 224 NTQTIKLGRPKKRIAGFLPGSKLLSKLAEFLNLELGNNGQVLW 266 >gi|289208372|ref|YP_003460438.1| peptidase S49 [Thioalkalivibrio sp. K90mix] gi|288944003|gb|ADC71702.1| peptidase S49 [Thioalkalivibrio sp. K90mix] Length = 321 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 14/254 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSA 80 +W + HVA + + G I S +EL + ++R D A+++ ++S GGS Sbjct: 61 AWFEDDREPEEHVAVVEVDGLIASSARANAEELNKTLKRAFEADGTRAVMLRINSGGGSP 120 Query: 81 YAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 AI I ++K+ PV V ++ ASA Y I+ A++ I A++ S+VGSIGV Sbjct: 121 VQAAAIHDEILRLKDEHEDIPVYAVVTDIGASAAYYIAVAADEIYASQASMVGSIGVRLD 180 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 V L+ +GV + S KA PF ++ V + D++D + FV +V + R Sbjct: 181 SFGVVDLLENIGVERRLFTSGENKALLDPFLPLDEGHVSHIHDLMDGLHQQFVDVVRQGR 240 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + L DG IWTG A +GLID +G + V + + + K+ + P ++ Sbjct: 241 GDRLAENEELFDGLIWTGQRAVDLGLIDGLGTDQSVARDVIG------VEKMVTFKPRRS 294 Query: 258 YWFCDLKNLSISSL 271 ++L +S+L Sbjct: 295 ALQLLFEDLGMSAL 308 >gi|115375108|ref|ZP_01462376.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|115367854|gb|EAU66821.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] Length = 587 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + + S D A++ + SPGGS A + + R +Q+ + + KPVI + AAS GY +S Sbjct: 317 LRKASEDKEVKAILFRVDSPGGSYVASDTVRREVQRAREKGKPVIVSMATYAASGGYFVS 376 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ IVA +L GSIGV F KLG++ +++ S S+ P+ Sbjct: 377 MGADKIVAQPGTLTGSIGVYGGKMVTADFWAKLGINFETISLGKDATLYSTDSDFTPEQQ 436 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +D Y F + +E R++P +K ++ GR+WTG +AK++GL+D +GG Sbjct: 437 AKNDASLDRVYTDFTQKAAEGRHLPLEKLQAVARGRVWTGEDAKELGLVDELGG 490 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 6/181 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE--AIFRAIQKVKNRKPVITEVHEMAA 108 ++++E +E+ ++D +L+V + PGG A A E +A + + T+ Sbjct: 61 RDVVEALEKAAQDKRVKSLLVHIDQPGGVAVAQELRDAVKAFRASGKKAVAFTDTFGEGG 120 Query: 109 SA--GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 SA Y ++ A + I + V G+ + P+ + KLGV + + K + Sbjct: 121 SATGAYYLATAFDEIYIQPSGDVTLTGIAMETPFARDAFAKLGVQPRIGQRYEYKNAVNT 180 Query: 167 FSEVNPKAV--QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 ++E A + + + S + VR ++E R + D+ L D G A + L+ Sbjct: 181 YTEQGYTAAHREATEKFLGSLFGQLVRGIAEGRKLSEDEVKGLIDRAPLLGQAALEAKLV 240 Query: 225 D 225 D Sbjct: 241 D 241 >gi|332762480|gb|EGJ92745.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 4343-70] Length = 594 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 299 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 358 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + K V+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 359 EVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 418 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 419 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 477 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 478 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 522 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 75 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 134 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 135 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 194 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 195 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 254 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 255 NKLVDALASSAEIEKAL 271 >gi|109898682|ref|YP_661937.1| signal peptide peptidase SppA, 67K type [Pseudoalteromonas atlantica T6c] gi|109700963|gb|ABG40883.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pseudoalteromonas atlantica T6c] Length = 620 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + + DDS ++++ + SPGGSA+A E I + I+ +K KPV+ + AAS GY Sbjct: 358 ELLRKARLDDSIKSVVLYVDSPGGSAFASEIIRQEIENLKAAGKPVVALMSTYAASGGYW 417 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I AA +++ GSIG+ + + LD LGV V ++ A ++PK Sbjct: 418 ISASADEIWAAPSTITGSIGIFGMFVSFENTLDYLGVHTDGVGTTDF-AGMGITRGIDPK 476 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q++Q ++ Y F+ LV+E R++ + ++ GR+W G A K+ L+D +G Sbjct: 477 MGQVLQRSIEHGYDQFISLVAEERHMSKESVDNIAQGRVWIGETALKLNLVDHLG 531 >gi|332527653|ref|ZP_08403699.1| protease IV [Rubrivivax benzoatilyticus JA2] gi|332112056|gb|EGJ12032.1| protease IV [Rubrivivax benzoatilyticus JA2] Length = 604 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 100/174 (57%), Gaps = 1/174 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 + R DD+ A+++ ++SPGGSA+ E I R ++ + KPV+ + ++AAS G+ IS Sbjct: 340 VRRARDDDAVRAIVLRVNSPGGSAFGSELIRRELELARAAGKPVVVSMGDVAASGGFWIS 399 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +++ IVA ++ GSIGV+ P + L++LG+ + ++S P + ++ + Sbjct: 400 TSADEIVADPATITGSIGVIAVLPTAERALERLGLHTEGYRTSWAVDAYDPRAPLDARTE 459 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 Q++Q + Y F+ V+ +R ++ + GR+W+GA+A+ GL+D GG Sbjct: 460 QVLQSSIGHVYGQFLERVATARKTTPERIDEIGQGRVWSGAQARVRGLVDRTGG 513 >gi|118487709|gb|ABK95679.1| unknown [Populus trichocarpa] Length = 625 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 351 EQLIEKIRQARESKKYKAAIIRIDSPGGDALASDLMWREIRLLAESKPVIASMSDVAASG 410 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPSP 166 GY ++ A++ IVA +L GSIGV+ + +K+G + + + + A+ P Sbjct: 411 GYYMAMAADTIVAENLTLTGSIGVVTGKFSLGKLYEKIGFNKEIISRGKYAELLAADQRP 470 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P ++ ++Y F + SR++P DK ++ GR+WTG +A GL+D Sbjct: 471 ---LRPDEAELFAKSAQNAYEQFRDKAAFSRSMPVDKMEEVAQGRVWTGQDAASRGLVDA 527 Query: 227 VGG 229 +GG Sbjct: 528 IGG 530 >gi|147868|gb|AAA24648.1| protease IV [Escherichia coli] Length = 618 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|153004053|ref|YP_001378378.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] gi|152027626|gb|ABS25394.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] Length = 831 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 10/194 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I ++ + ++ R + D + A+++ + SPGG A + I+R +Q+ + RKPVI + ++ Sbjct: 566 IAGAETISAQLRRAADDSAVKAIVLRVDSPGGDGVASDRIWREVQRARRRKPVIASMGDL 625 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GYL + ++ I+A ++L GSIGV P + L KLGV + + + E + Sbjct: 626 AASGGYLAAVGADEILAEPSTLTGSIGVFALKPDLSGLLSKLGVG----RDATARGENAQ 681 Query: 167 FSEV-----NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + V P+ + ++ +D Y FV V+E R + ++ GR+WTG +A++ Sbjct: 682 LTSVAKPWAGPERAAVERE-IDRFYAHFVARVAEGRKLDPAVVETVAAGRVWTGRQAQER 740 Query: 222 GLIDVVGGQEEVWQ 235 L+D +G E+ Q Sbjct: 741 HLVDRLGSLEDALQ 754 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 3/185 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ + L+ R+ D A+ V + G A E + A+ +++ RKPV+ + Sbjct: 318 GEPDPYGRLLRRLGEARDDPEVAAIAVRIEGLGLGAGRAEELRGALARIRERKPVLAYL- 376 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + Y I+ A+ + A S + G+ +VK L +LGV+ + VK K P Sbjct: 377 AGGGTTEYWIASAATALAAQPGSTLFVNGLSTSTLFVKDTLARLGVAFEVVKRGAYKTAP 436 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P S+ +P+A ++ V+D Y V V+ +R +P ++ L D ++ +A++ G Sbjct: 437 EPLVRSDASPEAREVTASVLDDLYARIVADVAAARRLPEERVRALVDRGLFGAEDAQREG 496 Query: 223 LIDVV 227 L+D V Sbjct: 497 LLDAV 501 >gi|283833434|ref|ZP_06353175.1| signal peptide peptidase SppA [Citrobacter youngae ATCC 29220] gi|291071088|gb|EFE09197.1| signal peptide peptidase SppA [Citrobacter youngae ATCC 29220] Length = 618 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + I G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGESIGVIFANGAIMDGEETPGNVGGDTTAAQIREARLDPKVKAIVLRVNSPGGSVSAS 382 Query: 84 EAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLTGSIGIFGVINTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ LV+++R + Sbjct: 443 NSLDSIGVHTDGVATSPL-ADISITKALPPEVQQMMQLSIENGYKRFITLVADARKTTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKLKQWH 546 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 13/181 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T +++ L + G+ + I +A+++ ++ KPV + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGADQPSMQYIGKALREFRDSGKPVFAVGDNFSQG 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 YL S A+ I ++ + S V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIYLSPQGS-VDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIR 217 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +++P A + + + ++ V+ +R IP + ++ GA+A GL V Sbjct: 218 DDMSPAAREADSRWIGELWQNYLDTVAANRQIPAQQ--------VFPGAQAMLDGLTKVD 269 Query: 228 G 228 G Sbjct: 270 G 270 >gi|224135361|ref|XP_002322054.1| predicted protein [Populus trichocarpa] gi|222869050|gb|EEF06181.1| predicted protein [Populus trichocarpa] Length = 691 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++LIE+I + A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 417 EQLIEKIRQARESKKYKAAIIRIDSPGGDALASDLMWREIRLLAESKPVIASMSDVAASG 476 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPSP 166 GY ++ A++ IVA +L GSIGV+ + +K+G + + + + A+ P Sbjct: 477 GYYMAMAADTIVAENLTLTGSIGVVTGKFSLGKLYEKIGFNKEIISRGKYAELLAADQRP 536 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P ++ ++Y F + SR++P DK ++ GR+WTG +A GL+D Sbjct: 537 ---LRPDEAELFAKSAQNAYEQFRDKAAFSRSMPVDKMEEVAQGRVWTGQDAASRGLVDA 593 Query: 227 VGG 229 +GG Sbjct: 594 IGG 596 >gi|163311063|pdb|3BF0|A Chain A, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals gi|163311064|pdb|3BF0|B Chain B, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals gi|163311065|pdb|3BF0|C Chain C, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals gi|163311066|pdb|3BF0|D Chain D, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals Length = 593 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 298 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 357 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 358 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 417 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A MMQ +++ Y F+ LV+++R+ + Sbjct: 418 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPE 476 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 477 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 521 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 74 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 133 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 134 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 193 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 194 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 253 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 254 NKLVDALASSAEIEKAL 270 >gi|237731223|ref|ZP_04561704.1| protease 4 [Citrobacter sp. 30_2] gi|226906762|gb|EEH92680.1| protease 4 [Citrobacter sp. 30_2] Length = 618 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 V Y+ +S D + + G I D +E +I D A+++ Sbjct: 311 VSYYDYSLKTPADTGDSIGVVFANGAIMDGEETPGNVGGDTTAAQIREARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I KPV+ + MAAS GY IS ++ IVA ++L G Sbjct: 371 RVNSPGGSVSASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ Sbjct: 431 SIGIFGVINTVENSLDSIGVHTDGVATSPL-ADISITKALPPEVQQMMQLSIENGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKTTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 13/181 (7%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T +++ L + G + + I +A+++ ++ KPV + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGADQPSMQYIGKALREFRDSGKPVFAVGDNFSQG 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 YL S A+ I ++ + S V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIYLSPQGS-VDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIR 217 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +++P A + + + ++ V+ +R IP + ++ GA+A GL V Sbjct: 218 DDMSPAAREADSRWIGELWQNYLDTVAANRQIPAQQ--------VFPGAQAMLDGLTKVD 269 Query: 228 G 228 G Sbjct: 270 G 270 >gi|261840109|gb|ACX99874.1| protease IV, 36K short form [Helicobacter pylori 52] Length = 292 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 128/241 (53%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS V P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESVPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|221214108|ref|ZP_03587081.1| peptidase S49 [Burkholderia multivorans CGD1] gi|221166285|gb|EED98758.1| peptidase S49 [Burkholderia multivorans CGD1] Length = 330 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L+ L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLAVFLLLAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFEDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDSVAR 283 Query: 236 SL 237 + Sbjct: 284 EV 285 >gi|157158760|ref|YP_001463065.1| protease 4 [Escherichia coli E24377A] gi|157080790|gb|ABV20498.1| protease 4 [Escherichia coli E24377A] Length = 618 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 323 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + K V+ + MAAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 383 EVIRAELAAARAAGKLVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A QMMQ +++ Y F+ LV+++R+ + Sbjct: 443 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPE 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 502 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 546 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + GG + + I +A+++ ++ + V E + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 +++P A + + + ++ V+ +R IP + L +G TG + K Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALE 278 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 279 NKLVDALASSAEIEKAL 295 >gi|326789880|ref|YP_004307701.1| signal peptide peptidase SppA, 36K type [Clostridium lentocellum DSM 5427] gi|326540644|gb|ADZ82503.1| signal peptide peptidase SppA, 36K type [Clostridium lentocellum DSM 5427] Length = 315 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 102/186 (54%), Gaps = 5/186 (2%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAG 111 I RI + D + + ++SPGG Y + ++ +++ K +PV + + AAS G Sbjct: 73 INRINELMYDKQNKGIFLYVNSPGGGIYESDELYLKLKEYKEVTERPVYAYMAQTAASGG 132 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A++ I A ++ GSIGV+ + LG+ +++ S KA +P ++ Sbjct: 133 LYVCMAADKIYANRMTMTGSIGVIMSMTDTTGLQELLGIKTENIVSGENKAMGNPLTD-- 190 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + Q++Q ++D SY+ FV +V+E+R++ K L+DGR+++ +AK +GLID VG E Sbjct: 191 -EQRQILQTMIDESYNIFVDVVAENRSLTEAKVKELADGRVYSALQAKDLGLIDEVGSVE 249 Query: 232 EVWQSL 237 + ++ Sbjct: 250 DAMHAM 255 >gi|317152403|ref|YP_004120451.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] gi|316942654|gb|ADU61705.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] Length = 329 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 2/200 (1%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVI 100 +R QEL+ + D +++++ SPGG+ A + ++ I K R K V+ Sbjct: 69 LRSTPSQVQELVSALALAEADTEVKGVVLAIDSPGGTTTASDILYHEIADFKQRTGKKVV 128 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + ++AAS GY + ++ I+A T++ GS+GV+F P + DK+GV ++ KS Sbjct: 129 VAMFDVAASGGYYAALPADWILAHPTTITGSVGVVFMRPKLHGLFDKIGVDVEVSKSGED 188 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K SPF P+ + Q ++D F+ LV++ R + ++ R++T +A Sbjct: 189 KDMGSPFRPTTPEEAALFQAIIDDYAARFLALVAKHRALTPQNMALVRTARVFTANQALA 248 Query: 221 VGLIDVVGGQEEVWQSLYAL 240 GL+D VG ++ + AL Sbjct: 249 AGLVDQVGYIQDAFARARAL 268 >gi|258621243|ref|ZP_05716277.1| Protease IV [Vibrio mimicus VM573] gi|258586631|gb|EEW11346.1| Protease IV [Vibrio mimicus VM573] Length = 616 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 22 VVYFSWSSHVE----DNSPHVARIAIRGQIEDSQE--------LIERIERISRDDS-ATA 68 + Y+ + + V+ + + +A + G I D + + + R +R+DS A Sbjct: 307 ISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSS 185 L GSIG+ + L+ LG+ V ++P + + ++ A+Q+ +++ Sbjct: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGVTTGLTQGAKDAIQLG---IENG 483 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 484 YQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 >gi|67925053|ref|ZP_00518433.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Crocosphaera watsonii WH 8501] gi|67853100|gb|EAM48479.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Crocosphaera watsonii WH 8501] Length = 596 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 114/219 (52%), Gaps = 16/219 (7%) Query: 38 VARIAIRGQIEDSQELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 V + R QI S+ E+I R I D A+++ ++SPGGSA + I R +Q ++ + Sbjct: 320 VDGVGTREQIGTSR--FEKILRKIREDKQVKAVVLRINSPGGSATGSDIILREVQLIQEK 377 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IK 153 KPVI + +AAS GY I+ I A ++ GSIGV ++ + G++ +K Sbjct: 378 KPVIISMGNVAASGGYWIATGGEHIFAQPNTITGSIGVFGLLFNIQEVANNNGITWDVVK 437 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + K + + P +E + + + Q V+ Y F+ V+ESR++ +K ++ G++W Sbjct: 438 TGKFADLGTVRRPKTE---QELAIYQKSVNRVYDLFLEKVAESRDLAKEKVADIAQGKVW 494 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA-----LGVDQSIR 247 +G AK +GL+D GG + Q YA LG D I+ Sbjct: 495 SGKTAKNIGLVDSFGGLDAAIQ--YAVEQAELGTDWEIK 531 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 17/220 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-------ELIERIERISRDDSATALIVSL 73 +V+ S+ + D P V I + D Q ++++ IE+ S+D A+ + Sbjct: 49 SVLVLDLSTEIRDREPMVN---ISDILSDRQRSVLTLNQVVKNIEKASKDSRIEAIFLDG 105 Query: 74 SSP-GGSAYAGEAIFR-AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 S+ GS YA A R A+ K K K +I + YL S A +IV L+ Sbjct: 106 SNASAGSGYANFAEIREALIKFKESGKKIIAYDVTLTEQEYYLTSLADTLIVHP-MGLME 164 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EPSPFSEVNPKAVQMMQDVVDSSYHW 188 G+ + + DK G+ ++ V+ K+ EP +E++ + Q +Q ++ S ++ Sbjct: 165 LNGIGTESLFWTGAFDKYGIGVQVVRVGDYKSAVEPYTRTELSAENRQQLQVLLGSIWNN 224 Query: 189 FVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +++ V ESR I P D V + + EA+ + LID + Sbjct: 225 YLQEVGESRQINPNDLQKVADNQGVLVPEEAQNLKLIDQI 264 >gi|269127810|ref|YP_003301180.1| signal peptide peptidase SppA, 67K type [Thermomonospora curvata DSM 43183] gi|268312768|gb|ACY99142.1| signal peptide peptidase SppA, 67K type [Thermomonospora curvata DSM 43183] Length = 570 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 1/165 (0%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 RD+ A++ ++SPGGSA A +AI+R + + KPVI + ++AAS GY ++ A+++ Sbjct: 324 RDERIKAIVFRVNSPGGSAVASDAIWREVVLARRAGKPVIVSMGDVAASGGYYVAMAADV 383 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA ++ GSIGV+ + L+++GV + SV S + +P + + Sbjct: 384 IVAQPGTITGSIGVVTGKAVLSGLLERIGVGMGSVTDGEHALMYSAIKDFSPSEWERINA 443 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +D Y F V+E R + + L+ GR+WTGA+AK+ GL+D Sbjct: 444 SLDHIYENFTAKVAEGRGLSRRRVEELARGRVWTGADAKEHGLVD 488 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 2/125 (1%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE-- 169 Y ++ A + + T VG GV + P+++ L+K G+ + K + F E Sbjct: 118 YYLASAFDRVYLQPTGEVGLTGVALEEPFLRGALEKAGIEPRFAARHEYKTVANMFMERA 177 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 P+ + Q +VDS+ +++ R + ++ L D AEA + GL+D + Sbjct: 178 YTPEHRESSQRLVDSAGRQLAEGIAQGRGLTVERVRELIDRGPLLAAEALEAGLVDRLAY 237 Query: 230 QEEVW 234 ++EV+ Sbjct: 238 RDEVY 242 >gi|124026360|ref|YP_001015476.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. NATL1A] gi|123961428|gb|ABM76211.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. NATL1A] Length = 269 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 111/198 (56%), Gaps = 2/198 (1%) Query: 37 HVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I ++++++ + + + AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARICIEGPINSETRKIVLKALKQIEEREFPALLLRIDSPGGTVGDSQEIHSALLRLRE 71 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+ ++AS G I + IVA ++ GSIGV+ + + L+K+G+ ++ Sbjct: 72 KGCHVVASFGNISASGGVYIGVGAEKIVANPGTITGSIGVILRGNNLSKLLEKVGIKFET 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS K SP ++ + ++Q ++DSSY FV VS+ RN+ + +DGR++T Sbjct: 132 VKSGIYKDILSPDRPLSTEERALLQSLIDSSYEQFVLAVSKGRNLTPEVVKSFADGRVFT 191 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +AK+ GL+D +G + + Sbjct: 192 GEQAKEFGLVDEIGDEND 209 >gi|72382638|ref|YP_291993.1| signal peptide peptidase A [Prochlorococcus marinus str. NATL2A] gi|72002488|gb|AAZ58290.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Prochlorococcus marinus str. NATL2A] Length = 269 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 111/198 (56%), Gaps = 2/198 (1%) Query: 37 HVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I ++++++ + + + AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARICIEGPINSETRKIVLKALKQIEEREFPALLLRIDSPGGTVGDSQEIHSALLRLRE 71 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+ ++AS G I + IVA ++ GSIGV+ + + L+K+G+ ++ Sbjct: 72 KGCHVVASFGNISASGGVYIGVGAEKIVANPGTITGSIGVILRGNNLSKLLEKVGIKFET 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS K SP ++ + ++Q ++DSSY FV VS+ RN+ + +DGR++T Sbjct: 132 VKSGIYKDILSPDRPLSTEERALLQSLIDSSYEQFVLAVSKGRNLTPEVVKSFADGRVFT 191 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +AK+ GL+D +G + + Sbjct: 192 GEQAKEFGLVDEIGDEND 209 >gi|221201332|ref|ZP_03574371.1| peptidase S49 [Burkholderia multivorans CGD2M] gi|221208812|ref|ZP_03581810.1| peptidase S49 [Burkholderia multivorans CGD2] gi|221171268|gb|EEE03717.1| peptidase S49 [Burkholderia multivorans CGD2] gi|221178600|gb|EEE11008.1| peptidase S49 [Burkholderia multivorans CGD2M] Length = 330 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L+ L ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLAVFLLFAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFEDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDSVAR 283 Query: 236 SL 237 + Sbjct: 284 EV 285 >gi|296122406|ref|YP_003630184.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] gi|296014746|gb|ADG67985.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] Length = 338 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 127/236 (53%), Gaps = 15/236 (6%) Query: 24 YFSWSSHVED-----NSPHVARIAI---RGQIED--SQELIERIERISRDDSATALIVSL 73 YF+ S V + NS RIA+ G I ++ +I +IE + D+ +++++ Sbjct: 47 YFARSPEVSERFLSGNSSTTQRIAVLRVSGTIMPPLTERIIRQIEVAAEDERVKGVLLTI 106 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI---IVAAETSLVG 130 SPGG I+ A++K++ +KP+ ++ +AAS GY I+ + I A T+ G Sbjct: 107 DSPGGFVADSHQIYHALEKLRAKKPISIQMKRLAASGGYYIAMGAGTKGQIFAEPTTWTG 166 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + ++K+GVS +K+ K SPF + ++ +++++ S+ F+ Sbjct: 167 SIGVIIPRYDMSELVEKIGVSSDPLKTGEFKDALSPFHPLTEAERKVWEEILNQSFEQFI 226 Query: 191 RLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQ 244 L+ +R+ + ++ L+ G+I+T +A+ G+ID +G +E+ +L +L +DQ Sbjct: 227 ELIDTNRDTLDREQARKLATGQIYTARDARANGMIDEIGFEEDALAALQKSLKLDQ 282 >gi|71083320|ref|YP_266039.1| S49 family peptidase [Candidatus Pelagibacter ubique HTCC1062] gi|91762250|ref|ZP_01264215.1| Peptidase family S49 [Candidatus Pelagibacter ubique HTCC1002] gi|71062433|gb|AAZ21436.1| Peptidase family S49 [Candidatus Pelagibacter ubique HTCC1062] gi|91718052|gb|EAS84702.1| Peptidase family S49 [Candidatus Pelagibacter ubique HTCC1002] Length = 268 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 8/203 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI--QKVKNRKPVITEVHEMAA 108 +E+IE+ + + A A+ ++++SPGGS I++ I Q KN+ VI ++AA Sbjct: 36 EEIIEKAFSLKK---AKAVAITINSPGGSPVQSHLIYKFIRAQAKKNKIKVIVFAEDVAA 92 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GYLI+CA + I A +S++GSIGV++ + K+GV + + K+ PF Sbjct: 93 SGGYLIACAGDEIYANSSSIIGSIGVIYSSFGFTELIKKIGVERRVHTAGKNKSSLDPFQ 152 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVV 227 E + ++ ++++ + F+++V ESR K + L G W G+++K++GLID + Sbjct: 153 EEKSEDIERLKNIQLDLHKDFIKVVEESRGSKLKKDGIELFSGEFWAGSKSKELGLIDGL 212 Query: 228 GGQEEVWQSLYALGVDQSIRKIK 250 G E+ + + G D I+K + Sbjct: 213 GNANEILKEKF--GEDVIIKKFE 233 >gi|196249953|ref|ZP_03148648.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. G11MC16] gi|196210467|gb|EDY05231.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. G11MC16] Length = 335 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 19/228 (8%) Query: 20 LTVVYFSWSSHV-EDNSP--HVARIAIRGQIEDS--------------QELIERIERISR 62 L+++ S+S V ED P + + + G IED+ Q ++ I+++ Sbjct: 41 LSLMEDSFSEEVIEDGDPLKKIVVLEVNGVIEDTGEAETFFSSSFYNHQAFLKMIKQVKE 100 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFR--AIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 DDS A+++ ++SPGG + K + +KP+ + MAAS GY I+ A + Sbjct: 101 DDSVKAIVLRINSPGGGVVESAEVHNQLLKLKKETKKPIYVSMGAMAASGGYYIATAGDK 160 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A+ ++ GSIGV+ Q + K GV + ++KS P K +P ++ +++Q Sbjct: 161 LFASPETITGSIGVIMQSINYEGLAKKYGVELVTIKSGPYKDIMNPARKMTDAEQEILQR 220 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++ SY FV ++ E R + + L+DGRI+ G +AK + LID G Sbjct: 221 LINQSYEGFVDVIVEGRKLSEEAVRKLADGRIYDGRQAKALQLIDEFG 268 >gi|326795267|ref|YP_004313087.1| peptidase S49 [Marinomonas mediterranea MMB-1] gi|326546031|gb|ADZ91251.1| peptidase S49 [Marinomonas mediterranea MMB-1] Length = 367 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 115/232 (49%), Gaps = 15/232 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+V L L+ V +S SS VED VA I +RG I D+ E IE Sbjct: 88 KIFFRFVGLFLIVGIFVGWSASSVVEDAALTGDSVALIPMRGTIGAGLDIDADEYSLLIE 147 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-----PVITEVHEMAASAGYL 113 D A+++ ++SPGGS ++ + + RK P+I V +MAAS GY Sbjct: 148 DAYADARTKAVVIKMNSPGGSPVHSGILYDLL--MSKRKSYPDIPLIVVVSDMAASGGYY 205 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I A + SLVGSIGV+ L+ +GV ++ + KA PFS + P Sbjct: 206 IASAADEIYADKASLVGSIGVVSPGFDASGLLESIGVERRTFTAGEDKAFLDPFSPMTPS 265 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 A Q Q V+DS++ F+ V + R L G ++TG +A GLID Sbjct: 266 AAQKWQSVLDSTHKQFIEAVKKGRGDRLSLERDLFTGMVFTGEQAVSYGLID 317 >gi|257459261|ref|ZP_05624378.1| signal peptide peptidase SppA, 36K type [Campylobacter gracilis RM3268] gi|257443360|gb|EEV18486.1| signal peptide peptidase SppA, 36K type [Campylobacter gracilis RM3268] Length = 290 Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 6/229 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + ++A++++ G I D E++E+IE + D++ +++ + SPGG+ I AI Sbjct: 41 AQQKGANLAQLSLSGAIMDDSEILEKIEALKNDEAIKGVLLLIDSPGGALSPSVEISLAI 100 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + + +RKPV+ AS YL ++ I A S +GSIGV+ Q V KLG Sbjct: 101 KSLNSRKPVVAYAKGTMASGSYLGGVWASKIYANPGSFIGSIGVIMQGLDVSEAAAKLGF 160 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + VK+ +K + + + +Q +VD SY F R V+++R++ K ++ Sbjct: 161 AEQIVKAGELKEAGTMMRKWSDAERASLQALVDESYELFTREVAQARSLDIRKRDTWANA 220 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNY 258 R++ + AK VGLID VG ++ +L A GV I W P Y Sbjct: 221 RVFLASGAKGVGLIDEVGSLDDAKSALVKASGVADPI-----WQEPSAY 264 >gi|313499938|gb|ADR61304.1| Signal peptide peptidase SppA, 36K type [Pseudomonas putida BIRD-1] Length = 329 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 12/236 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + ++ L ++ H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 +DD A+++ ++SPGGS ++ I++++ P I + ++ AS Y I+ Sbjct: 103 EAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A++ I A + SLVGSIGV Y +V ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGT-MEKLGVERRAYTSGEHKAFLDPFSPEKPEE 221 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + Q V+D+++ F+ +V + R + + L G IW+G +AK +GL+D +G Sbjct: 222 TRFWQGVLDTTHQQFIAMVKQGRGERLKDKQHPELFSGLIWSGEQAKALGLVDGLG 277 >gi|242062658|ref|XP_002452618.1| hypothetical protein SORBIDRAFT_04g029200 [Sorghum bicolor] gi|241932449|gb|EES05594.1| hypothetical protein SORBIDRAFT_04g029200 [Sorghum bicolor] Length = 672 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 106/182 (58%), Gaps = 3/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + + A+I+ + SPGG A A + ++R I+ + N KPV+ + ++AAS Sbjct: 396 AEQLIEKIRTVRESEKYKAVILRIDSPGGDALASDLMWREIRLLANSKPVVASMSDVAAS 455 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+ +IVA + +L GSIGV+ ++ F +++ + K + S AE + + Sbjct: 456 GGYYMAMAAPVIVAEKLTLTGSIGVVTGKFCLQKFYERIDFN-KEILSKGRYAELNAADQ 514 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ +++ GR+W+G +A GL+D V Sbjct: 515 RPLRPDEAELFEKSAQNAYALFRDKAAMSRSMSVDQMEIVAQGRVWSGHDAFSRGLVDSV 574 Query: 228 GG 229 GG Sbjct: 575 GG 576 >gi|134095273|ref|YP_001100348.1| putative signal peptide peptidase [Herminiimonas arsenicoxydans] gi|133739176|emb|CAL62225.1| Putative peptidase S49 [Herminiimonas arsenicoxydans] Length = 334 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 15/236 (6%) Query: 13 VMLSLVTLTVVYFS-WSSH------VEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 + TL ++ F+ W+S +E+ PH A I I G IE D++ +I + + Sbjct: 51 IFFKFTTLLLIAFALWTSFGPSVSDMENVGPHTALIKIEGTIEAKGAGDAETVISALTKA 110 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCA 117 D + LI+ ++SPGGS I I +++ + KP+ V+E+ AS GY I+ A Sbjct: 111 YADPGSVGLILQINSPGGSPVQAGIINDEITRLRKKYPKKPLYVVVNEICASGGYYIASA 170 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL ++KLGV + + + K PFS K + Sbjct: 171 ADRIYVNKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPQTEKQKEY 230 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q +++ + F+ +V R +T + G W+GA++ ++GL D G E V Sbjct: 231 AQGMLNEIHQQFIDVVRTGRGKRLKETPEIFSGLFWSGAKSVELGLADGFGTVESV 286 >gi|159903808|ref|YP_001551152.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9211] gi|159888984|gb|ABX09198.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9211] Length = 269 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 109/194 (56%), Gaps = 2/194 (1%) Query: 37 HVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI I G I D+++L + + + AL+V + SPGG+ + I A+ +++ Sbjct: 12 RMARIIIDGAINGDTRKLFLKAVKQVEEREFPALLVRIDSPGGTVGDSQEIHAALLRLRE 71 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+ ++AS G + A+ IVA ++ GSIGV+ + + L+K+G+ ++ Sbjct: 72 SGCHVVASFGNISASGGVYVGVAAEKIVANPGTITGSIGVILRGNNLSKLLEKIGIKFET 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS K SP ++ + +++Q ++DSSY FV V++ R + + +DGR++T Sbjct: 132 VKSGLYKDILSPDRALSKEERELLQSLIDSSYGQFVEAVAKGRGLSEEVVRGFADGRVFT 191 Query: 215 GAEAKKVGLIDVVG 228 G +A+++GL+D +G Sbjct: 192 GTQARELGLVDELG 205 >gi|298491184|ref|YP_003721361.1| signal peptide peptidase SppA ['Nostoc azollae' 0708] gi|298233102|gb|ADI64238.1| signal peptide peptidase SppA, 36K type ['Nostoc azollae' 0708] Length = 273 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 111/198 (56%), Gaps = 3/198 (1%) Query: 37 HVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I + ++E ++ + + L++ + SPGG+ + I+ A++++ Sbjct: 12 QIARIEITGVIAGATRTRVLEALKTVE-EKKFPGLLLRIDSPGGTVGDSQEIYSALKRLG 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + ++ ++AS G I + I++ ++ GSIGV+ + ++ L+K+GVS K Sbjct: 71 KKTKIVASFGNISASGGVYIGMGAEHIMSNPGTITGSIGVILRGNNLERLLEKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ ++Q ++D SY FV+ ++E+R + + +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTEAEENILQQLIDVSYQQFVQTIAEARYLAVETVKGFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEE 232 G +A ++G++D +G +E+ Sbjct: 191 GEQAVELGVVDRLGTEED 208 >gi|197285358|ref|YP_002151230.1| protease IV [Proteus mirabilis HI4320] gi|227355792|ref|ZP_03840185.1| protease IV (signal peptide peptidase) [Proteus mirabilis ATCC 29906] gi|194682845|emb|CAR43150.1| protease IV (signal peptide peptidase) [Proteus mirabilis HI4320] gi|227164111|gb|EEI49008.1| protease IV (signal peptide peptidase) [Proteus mirabilis ATCC 29906] Length = 618 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 33/245 (13%) Query: 32 EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYA 82 E+ ++A + ++G I D + + +I + + + AL++ ++SPGGS A Sbjct: 325 ENEDGNIAVVVVQGAIIDGESIPGSAGGSTIANQIRQARLNPNIRALVLRVNSPGGSVSA 384 Query: 83 GEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I I K +K V+ + MAAS GY IS ++ I+A+ ++L GSIG+ Sbjct: 385 SEQIRSEIAAFKQEKKHVVVSMGGMAASGGYWISTPASKIIASPSTLTGSIGIFGVINTF 444 Query: 142 KPFLDKLGVSIKSVKSSPMKAE------PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L+ +GV V +SP+ P FSE + Q ++S Y F++LV+E Sbjct: 445 ENSLESIGVHSDGVSTSPLAGLSVTNKLPEDFSE-------LFQLNIESGYKTFLKLVAE 497 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK----D 251 SRN + ++ GR+W G +AK+VGL+D G ++ A+ ++ KIK D Sbjct: 498 SRNKTPAQVDRIAQGRVWVGVDAKQVGLVDEFGDFDD------AINAAATMAKIKQPVID 551 Query: 252 WNPPK 256 W P+ Sbjct: 552 WMKPE 556 >gi|149920473|ref|ZP_01908941.1| SppA [Plesiocystis pacifica SIR-1] gi|149818654|gb|EDM78099.1| SppA [Plesiocystis pacifica SIR-1] Length = 683 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 14/222 (6%) Query: 34 NSPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGS 79 PHVA + G I D S +L+ ++RI+ DD+ A+++ + S GGS Sbjct: 370 TEPHVAIVYAVGNIIDGKGQGALGATSEIASGQLVPVLDRIAADDAVAAVVLRVDSGGGS 429 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E I+ A++++K KPV+ + +AAS GY IS +N IVA ++ GSIGV+ Sbjct: 430 ALASEQIWHAVERLKANKPVVVSMAGVAASGGYYISAGANHIVAEPNTITGSIGVVGGKL 489 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L + GV +VK SP + + ++ +Y F+ V+ R++ Sbjct: 490 AMGEALSRWGVETFTVKKGARANLWSPMDTWTEEERAAIYATMEETYEVFLSRVAAGRSM 549 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 D ++ GR+WTGA+AK+ GL+D +GG E LG Sbjct: 550 DRDGVHAIAQGRVWTGADAKERGLVDELGGIEVALAKAAELG 591 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 6/219 (2%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + VE P + G ++ L++ ++ ++ +D LI+ + + G E + Sbjct: 112 AEVEGVDPLAMVLGGGGSTLQTRALLDELDELAAEDEVRGLILRVGNLGMDMARAEELRA 171 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + + K + I E +A Y + A + + A V G + ++K LDKL Sbjct: 172 GLLEFKATERSIYCHAETLDNASYYLLSACDELSMAPVGTVAIPGPIATPIHLKGLLDKL 231 Query: 149 GVSIKSVKSSPMK--AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 GV + K AEP +P+ ++ ++ V+D ++ V ++ R ++ Sbjct: 232 GVQPDFLHVGAFKGAAEPLTRDAPSPEMIETLEAVIDKAHGTMVEGIASGRKRSPEEVSA 291 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 D ++T +AK+ GLID V +VW+ A D + Sbjct: 292 WIDEALYTTEKAKQAGLIDRV----DVWERYLADATDAA 326 >gi|213417443|ref|ZP_03350585.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 543 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 12/218 (5%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 LV+++R ++ ++ G +WTG +AK GL+D +G Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLG 527 >gi|148549012|ref|YP_001269114.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida F1] gi|148513070|gb|ABQ79930.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida F1] Length = 329 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 12/206 (5%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ H A + +RG I D + +++ + +DD A+++ ++SPGGS ++ Sbjct: 73 SASHTALVEVRGVIADQEAASADNIVKSLREAFKDDKTKAVVMRINSPGGSPVQAGYVYD 132 Query: 89 AIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPF 144 I++++ P I + ++ AS Y I+ A++ I A + SLVGSIGV Y +V Sbjct: 133 EIRRLRAEYPAIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTAAGYGFVGA- 191 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLGV ++ S KA PFS P+ + Q V+D+++ F+ +V + R + Sbjct: 192 MEKLGVERRAYTSGEHKAFLDPFSPEKPEETRFWQGVLDTTHQQFIAMVKQGRGERLKDK 251 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + L G IW+G +AK +GL+D +G Sbjct: 252 EHPELFSGLIWSGEQAKALGLVDGLG 277 >gi|308064188|gb|ADO06075.1| protease IV (PspA) [Helicobacter pylori Sat464] Length = 292 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSEPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P Q +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKQFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|254432478|ref|ZP_05046181.1| signal peptide peptidase SppA, 36K type [Cyanobium sp. PCC 7001] gi|197626931|gb|EDY39490.1| signal peptide peptidase SppA, 36K type [Cyanobium sp. PCC 7001] Length = 270 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 118/225 (52%), Gaps = 4/225 (1%) Query: 38 VARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARIAI G I ++ + + R AL++ + SPGG+ + I A+ +++ + Sbjct: 13 MARIAIEGPIGGGTRTRVLKALRQVEQRECPALLLRIDSPGGTVGDSQEIHAALMRLRQK 72 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+ ++AS G I A+ IVA S+ GSIGV+ + + L+++GVS ++V Sbjct: 73 GCRVVASFGNISASGGVYIGVAAEKIVANPGSITGSIGVILRGNNLSKLLERIGVSFETV 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS K SP + ++Q ++DSSY FV V+E R + + +DGR+++G Sbjct: 133 KSGLYKDILSPDRALTEAERGLLQSLIDSSYGQFVAAVAEGRGLEEEAVRSFADGRVFSG 192 Query: 216 AEAKKVGLIDVVG-GQEEVWQSLYALGVD-QSIRKIKDWNPPKNY 258 A+A ++GL+D +G + + G+D + R I PP+ + Sbjct: 193 AQALELGLVDSLGDEEAARRLAAELAGLDVEKTRPITFGAPPRRF 237 >gi|254423024|ref|ZP_05036742.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7335] gi|196190513|gb|EDX85477.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7335] Length = 615 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 98/180 (54%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+ L + + DD A+++ ++SPGGSA A E I ++ + + KP++ + + AAS Sbjct: 350 SEGLSATLRDMREDDDIKAVVLRVNSPGGSATASEIIANEVRLLADEKPLVVSMGDYAAS 409 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+I+ I+A+ T++ GSIGV + ++ G++ VK++ + + Sbjct: 410 GGYMIAAPGAKILASPTTITGSIGVYGLLLNFQEIANENGITWDDVKTAQLAGMGTVSRP 469 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +++ QD VD+ Y F LV+E R+I + ++ GR+WTG EA L+D +GG Sbjct: 470 KTASELKVQQDYVDTLYTRFTSLVAEGRDISMARVGQVAQGRVWTGEEAINADLVDELGG 529 >gi|330446548|ref|ZP_08310200.1| signal peptide peptidase SppA, 67K type [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490739|dbj|GAA04697.1| signal peptide peptidase SppA, 67K type [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 587 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 119/222 (53%), Gaps = 17/222 (7%) Query: 22 VVYFSWSSH-VEDNSPHVARIAI---RGQIEDSQ--------ELIERIERISR-DDSATA 68 + Y+ + S V+D P ++A+ G I D + + I + R +R D + Sbjct: 278 ISYYDYLSMLVDDQEPSKNKVAVVVASGAIVDGKSSQGTAGGDTIAGLLRKARFDKDVKS 337 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 338 VILRVDSPGGSAFASEVIRNEVDALKEAGKPVVVSMSSVAASGGYWISSSASKIIAQPTT 397 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV-QMMQDVVDSSY 186 + GSIG+ + L+KLGV V ++P + P+ + ++ Q VD+ Y Sbjct: 398 ITGSIGIFAILTTFEKSLEKLGVYSDGVGTTPFAG--VGVTRALPENIAKIFQMGVDNGY 455 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ LVS+ R++ ++ ++ GR+WTG +AK GL+D +G Sbjct: 456 QRFIGLVSKYRHMSLEQADKIAQGRVWTGKDAKARGLVDELG 497 >gi|229521906|ref|ZP_04411323.1| protease IV [Vibrio cholerae TM 11079-80] gi|229340831|gb|EEO05836.1| protease IV [Vibrio cholerae TM 11079-80] Length = 616 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 3/172 (1%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I ++ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRHEVEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + + A + Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGMT-TGLTQGAKE 474 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 475 AIQLGIEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 >gi|238763177|ref|ZP_04624143.1| Protease 4 [Yersinia kristensenii ATCC 33638] gi|238698676|gb|EEP91427.1| Protease 4 [Yersinia kristensenii ATCC 33638] Length = 624 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 358 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGG 417 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A S ++ Sbjct: 418 YWISTPANYIIANPSTLTGSIGIFGVINTFQNTLESIGVHTDGVATSPL-ANISVTKDLP 476 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ +R+ ++ ++ G +W G +AK GL+D +G + Sbjct: 477 PEFSQMMQINIENGYKTFIDLVATARHKTPEQVDQIAQGHVWIGMDAKNNGLVDQLGDFD 536 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + + + L ++K W + WF D +LS Sbjct: 537 DAVKKVAELA------QLKTW---QLNWFVDEPSLS 563 >gi|169630869|ref|YP_001704518.1| protease IV SppA [Mycobacterium abscessus ATCC 19977] gi|169242836|emb|CAM63864.1| Possible protease IV SppA (endopeptidase IV) [Mycobacterium abscessus] Length = 583 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 10/192 (5%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DDS A+++ + SPGGS E I+R + + + KPV+ + +A S GY ++ +++ I Sbjct: 333 DDSVAAIVLRVDSPGGSVNGSETIWREVVRAREAGKPVVVSMGSVAGSGGYYVAMSADAI 392 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMM 178 +A ++ GSIGVL K +KLGV S++++ + PF++ + ++ Sbjct: 393 IANPGTVTGSIGVLTGKFITKGLKEKLGVGSDSLRTNANADAWSSNEPFTD---EQRDLV 449 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV---WQ 235 + +D Y FV+ V++ RN+ D ++ GRIW+G +A + GL+D +GG E + Sbjct: 450 EAEIDMHYEDFVQRVADGRNLTVDAVKAVAQGRIWSGKDALEHGLVDELGGFREAVAKAK 509 Query: 236 SLYALGVDQSIR 247 L +G D ++R Sbjct: 510 QLADIGADDNVR 521 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 47/210 (22%), Positives = 84/210 (40%), Gaps = 7/210 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + I I R D LI + P +A A + + AI+ KP + ++ Sbjct: 62 RHTIAAIHRAIEDPRVAGLIARVQIPPAAAGAVQELRAAIEAFSAVKPSLAWSETYPSTL 121 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ A + + VG IG + +++ LDK GV + + K+ + F+E Sbjct: 122 AYYLASAFGEVWMQPSGTVGLIGFAAKGTFLRGALDKAGVEAQFLTRGQYKSAANLFTED 181 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q D +++S V+ SR + + L+D +A GL+D +G Sbjct: 182 GYTDAQREADGRLLESLSEQVRDSVAVSRKLDPAEVDALADRAPLRRTDAVAGGLVDRIG 241 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 ++E + + L I D +PP Y Sbjct: 242 YRDEAYARIGEL-----IGLQDDRDPPLLY 266 >gi|268678929|ref|YP_003303360.1| signal peptide peptidase SppA, 36K type [Sulfurospirillum deleyianum DSM 6946] gi|268616960|gb|ACZ11325.1| signal peptide peptidase SppA, 36K type [Sulfurospirillum deleyianum DSM 6946] Length = 286 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 108/202 (53%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + S E +P++A + + G+I + +E++E I++ D++ +++ + SPGG+ + Sbjct: 36 FGSQDELKTPNLAIVKLEGEILNVEEILENIDKAQNDENIKGVLLHVDSPGGALAPSIEL 95 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 A++++ +KPV+ S Y S SN I+A + +GSIGVLFQ P V Sbjct: 96 SMAVKRLAEKKPVVAYAGGSMTSGSYYASIWSNYIIANPGAFIGSIGVLFQAPNVAELAK 155 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+S + + + K + E K +++++D +Y FV+ V+ +R + K Sbjct: 156 KLGISEQVLSAGEYKQMGTFTREWTQKERGALKNLIDDAYDLFVKDVATARGLNLAKPDE 215 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ +++ ++A V LID +G Sbjct: 216 FANAQVFIASKALNVHLIDEIG 237 >gi|294140831|ref|YP_003556809.1| signal peptide peptidase SppA, 67K type [Shewanella violacea DSS12] gi|293327300|dbj|BAJ02031.1| signal peptide peptidase SppA, 67K type [Shewanella violacea DSS12] Length = 613 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 5/186 (2%) Query: 45 GQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 GQI +S L+ R R DD+ A+++ + SPGGSA+A E I + + +K KPV+ Sbjct: 344 GQIGGESTSLLLRKARF--DDNVKAVVLRVDSPGGSAFASEQIRQEVLALKTAGKPVVVS 401 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + AAS GY IS +++ I A T+L GSIG+ + L LG+ V +S A Sbjct: 402 MGSYAASGGYWISASADYIYATPTTLTGSIGIFGMITTFEDSLSSLGIHTDGVATSEW-A 460 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S + P ++Q ++ YH F+ LV+ RN+ ++ ++ GR+W+G +A +G Sbjct: 461 GISVAKGLTPAIKSVIQRHIERGYHDFISLVATERNMSLEEVDNIAQGRVWSGRKALDLG 520 Query: 223 LIDVVG 228 LID +G Sbjct: 521 LIDELG 526 >gi|238751644|ref|ZP_04613134.1| Protease 4 [Yersinia rohdei ATCC 43380] gi|238710206|gb|EEQ02434.1| Protease 4 [Yersinia rohdei ATCC 43380] Length = 616 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRSELAALRAANKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N I+A ++L GSIG+ + L+ +GV V +SP+ A + ++ Sbjct: 410 YWISTPANYIIANPSTLTGSIGIFGVINTFQNSLESIGVHTDGVATSPL-ANVTVTKDLP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ +R+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATARHKTPEQVDQIAQGHVWIGLDAKNNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + + + L K+K W + WF D +LS Sbjct: 529 DAVKKVAELA------KLKTW---QLNWFVDEPSLS 555 >gi|258626525|ref|ZP_05721365.1| Protease IV [Vibrio mimicus VM603] gi|258581236|gb|EEW06145.1| Protease IV [Vibrio mimicus VM603] Length = 642 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 22 VVYFSWSSHVE----DNSPHVARIAIRGQIEDSQE--------LIERIERISRDDS-ATA 68 + Y+ + + V+ + + +A + G I D + + + R +R+DS A Sbjct: 333 ISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKA 392 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+ Sbjct: 393 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 452 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSS 185 L GSIG+ + L+ LG+ V ++P + + ++ A+Q+ ++ Sbjct: 453 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGVTTGLTQGAKDAIQLG---IEHG 509 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 510 YQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 552 >gi|121591501|ref|ZP_01678769.1| protease IV [Vibrio cholerae 2740-80] gi|121546642|gb|EAX56829.1| protease IV [Vibrio cholerae 2740-80] Length = 605 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEQFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|157370962|ref|YP_001478951.1| protease 4 [Serratia proteamaculans 568] gi|157322726|gb|ABV41823.1| signal peptide peptidase SppA, 67K type [Serratia proteamaculans 568] Length = 618 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 12/211 (5%) Query: 59 RISRDDSA-TALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R D A A+I ++SPGGS A E I + V+ KPV+ + MAAS GY +S Sbjct: 357 RQARLDPAIKAVIFRVNSPGGSVSASEVIRSELAAVRAAGKPVVVSMGGMAASGGYWVST 416 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 ++ I+A+ ++L GSIG+ + LD +GV V +SP+ A+ + + P+ Q Sbjct: 417 PADYIIASPSTLTGSIGIFGVINTYEQTLDSIGVHTDGVATSPL-ADLAVTKALPPEFSQ 475 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 MMQ ++ Y F+ LV++SR + + ++ G +W G++AK GL+D +G ++ + Sbjct: 476 MMQLNIEKGYQNFIDLVAKSRKMTPQQVDQIAQGHVWLGSDAKTNGLVDQLGDFDDAVKK 535 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 L ++K W + WF D +L+ Sbjct: 536 AAELA------QLKQW---QLNWFVDTPSLT 557 >gi|325106984|ref|YP_004268052.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] gi|324967252|gb|ADY58030.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] Length = 631 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 104/182 (57%), Gaps = 8/182 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++ +++ I + + +D A+++ ++SPGGSA A + I++A+++V KP + + ++A S Sbjct: 366 AESMVDTIRKANENDRVKAIVLRVNSPGGSALASDLIWKALEEVD--KPFVVSMGDVAGS 423 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSP 166 GY IS ++ I ++ GSIGV+ + +KLG++ V K+S + P Sbjct: 424 GGYYISMGADYIFVEPGTITGSIGVVGGKLAFEGLFNKLGITTSVVSRGKNSGALSATVP 483 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 FSE KA+Q M + V Y F R +E R++ + L+ GRI++G A ++GL+D Sbjct: 484 FSESERKAMQKMMNEV---YEIFTRKAAEGRDMELARLKELAGGRIYSGERAVEIGLVDE 540 Query: 227 VG 228 VG Sbjct: 541 VG 542 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 3/186 (1%) Query: 45 GQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 G++ +S ++ ER+E+ + DD +++ + +P I AI KV+ + Sbjct: 93 GEVTESLNKIEERLEKATNDDGIQGVVLKIDNPIVKLGTIHEIRHAIAKVRKAGKKVHAQ 152 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK-- 161 E A + LI+ A + I E+ ++ G+ + + K LDKL + ++ K Sbjct: 153 LETAMLSDLLIASACDEITMPESGMLLITGLRAEVGFYKNLLDKLEIEADILRVGKFKSA 212 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 AEP +E++P+ Q +++++D Y + V+ ++ESR + + D + A KV Sbjct: 213 AEPYTRTEMSPEFRQELEELLDDQYGYIVKTLAESRGLTEQQVTDAIDSGPHSAETAVKV 272 Query: 222 GLIDVV 227 GLID V Sbjct: 273 GLIDAV 278 >gi|262404348|ref|ZP_06080903.1| protease IV [Vibrio sp. RC586] gi|262349380|gb|EEY98518.1| protease IV [Vibrio sp. RC586] Length = 616 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE--------LIERIERISRDDS-ATA 68 V Y+ + + ++ N + +A + G I D + + + R +R+DS A Sbjct: 307 VSYYEYKASIQPNPLTDASDIAVVVASGAIMDGSQPRGTVGGDTLAGLLREARNDSNVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSS 185 L GSIG+ + L+ LG+ V ++P + + ++ A+Q+ ++ Sbjct: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGVTTGLTQGAKDAIQLG---IEHG 483 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y F+ LV+E R++ ++ GR+WT +A+ +GL+D +G Sbjct: 484 YQRFISLVAEKRSMTVKAVDEIAQGRVWTAQDAQTLGLVDQLG 526 >gi|229524006|ref|ZP_04413411.1| protease IV [Vibrio cholerae bv. albensis VL426] gi|229337587|gb|EEO02604.1| protease IV [Vibrio cholerae bv. albensis VL426] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQWKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|153829820|ref|ZP_01982487.1| protease IV [Vibrio cholerae 623-39] gi|148874679|gb|EDL72814.1| protease IV [Vibrio cholerae 623-39] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 25/204 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLSDGRIWT-------- 214 + M +S+ W +L V+ +R I KTL S + T Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEQFVTQLKEVNGD 268 Query: 215 -GAEAKKVGLIDVVGGQEEVWQSL 237 A +KKVGL+D + +++V Q+L Sbjct: 269 LAALSKKVGLVDELATRQQVRQTL 292 >gi|297579498|ref|ZP_06941426.1| protease IV [Vibrio cholerae RC385] gi|297537092|gb|EFH75925.1| protease IV [Vibrio cholerae RC385] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|229528985|ref|ZP_04418375.1| protease IV [Vibrio cholerae 12129(1)] gi|229332759|gb|EEN98245.1| protease IV [Vibrio cholerae 12129(1)] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 >gi|15641996|ref|NP_231628.1| protease IV [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730094|ref|ZP_01682498.1| protease IV [Vibrio cholerae V52] gi|147673256|ref|YP_001217520.1| protease IV [Vibrio cholerae O395] gi|153217088|ref|ZP_01950852.1| protease IV [Vibrio cholerae 1587] gi|153820012|ref|ZP_01972679.1| protease IV [Vibrio cholerae NCTC 8457] gi|153823324|ref|ZP_01975991.1| protease IV [Vibrio cholerae B33] gi|227082121|ref|YP_002810672.1| protease IV [Vibrio cholerae M66-2] gi|229507917|ref|ZP_04397422.1| protease IV [Vibrio cholerae BX 330286] gi|229511848|ref|ZP_04401327.1| protease IV [Vibrio cholerae B33] gi|229518984|ref|ZP_04408427.1| protease IV [Vibrio cholerae RC9] gi|229607462|ref|YP_002878110.1| protease IV [Vibrio cholerae MJ-1236] gi|254849080|ref|ZP_05238430.1| protease IV [Vibrio cholerae MO10] gi|255745257|ref|ZP_05419206.1| protease IV [Vibrio cholera CIRS 101] gi|262155982|ref|ZP_06029102.1| protease IV [Vibrio cholerae INDRE 91/1] gi|262167944|ref|ZP_06035644.1| protease IV [Vibrio cholerae RC27] gi|298497974|ref|ZP_07007781.1| signal peptide peptidase SppA, 67K type [Vibrio cholerae MAK 757] gi|9656536|gb|AAF95142.1| protease IV [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628165|gb|EAX60694.1| protease IV [Vibrio cholerae V52] gi|124113890|gb|EAY32710.1| protease IV [Vibrio cholerae 1587] gi|126509448|gb|EAZ72042.1| protease IV [Vibrio cholerae NCTC 8457] gi|126519158|gb|EAZ76381.1| protease IV [Vibrio cholerae B33] gi|146315139|gb|ABQ19678.1| protease IV [Vibrio cholerae O395] gi|227010009|gb|ACP06221.1| protease IV [Vibrio cholerae M66-2] gi|227013891|gb|ACP10101.1| protease IV [Vibrio cholerae O395] gi|229343673|gb|EEO08648.1| protease IV [Vibrio cholerae RC9] gi|229351813|gb|EEO16754.1| protease IV [Vibrio cholerae B33] gi|229355422|gb|EEO20343.1| protease IV [Vibrio cholerae BX 330286] gi|229370117|gb|ACQ60540.1| protease IV [Vibrio cholerae MJ-1236] gi|254844785|gb|EET23199.1| protease IV [Vibrio cholerae MO10] gi|255737087|gb|EET92483.1| protease IV [Vibrio cholera CIRS 101] gi|262023671|gb|EEY42372.1| protease IV [Vibrio cholerae RC27] gi|262030160|gb|EEY48804.1| protease IV [Vibrio cholerae INDRE 91/1] gi|297542307|gb|EFH78357.1| signal peptide peptidase SppA, 67K type [Vibrio cholerae MAK 757] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEQFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|327484530|gb|AEA78937.1| Protease IV [Vibrio cholerae LMA3894-4] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|229515373|ref|ZP_04404833.1| protease IV [Vibrio cholerae TMA 21] gi|229348078|gb|EEO13037.1| protease IV [Vibrio cholerae TMA 21] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|26988637|ref|NP_744062.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida KT2440] gi|24983418|gb|AAN67526.1|AE016381_3 peptidase, putative [Pseudomonas putida KT2440] Length = 329 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 12/206 (5%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ H A + +RG I D + +++ + +DD A+++ ++SPGGS ++ Sbjct: 73 SASHTALVEVRGVIADQEAASADNIVKSLREAFKDDKTKAVVMRINSPGGSPVQAGYVYD 132 Query: 89 AIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPF 144 I++++ P I + ++ AS Y I+ A++ I A + SLVGSIGV Y +V Sbjct: 133 EIRRLRAEYPAIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTAAGYGFVGT- 191 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLGV ++ S KA PFS P+ + Q V+D+++ F+ +V + R + Sbjct: 192 MEKLGVERRAYTSGEHKAFLDPFSPEKPEETRFWQGVLDTTHRQFIAMVKQGRGERLKDK 251 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + L G IW+G +AK +GL+D +G Sbjct: 252 EHPELFSGLIWSGEQAKALGLVDGLG 277 >gi|254286923|ref|ZP_04961875.1| protease IV [Vibrio cholerae AM-19226] gi|150423073|gb|EDN15022.1| protease IV [Vibrio cholerae AM-19226] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|119505648|ref|ZP_01627718.1| protease IV [marine gamma proteobacterium HTCC2080] gi|119458460|gb|EAW39565.1| protease IV [marine gamma proteobacterium HTCC2080] Length = 611 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 10/221 (4%) Query: 30 HVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSA 80 +E+ P +A I I G++ S ++ ++ER A+++ ++SPGGS Sbjct: 318 EIEETKPRIAVIPIEGELIPGESGRGFAGSDTVVSQLERALEQPDLRAVVLRINSPGGSV 377 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 +A E I + I ++K PV+ + +AAS GY I+ ++ I+A +++ GSIGV +P Sbjct: 378 FASEVIRQKILEIKAADLPVVASMGAVAASGGYYIAADADEILAQPSTITGSIGVFAAFP 437 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V+ GV+ V +S + + V+ +++ ++ Y FV LV+ R Sbjct: 438 TVEKLYQWAGVTSDGVSTSSLATAARVDTGVSDTGRRIINSMISKVYDDFVTLVALGRGK 497 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ ++ GR+W+G +A VGL+D +GG + S L Sbjct: 498 TWEEINSVAGGRVWSGEDALSVGLVDNLGGLQAALDSAAGL 538 >gi|262171018|ref|ZP_06038696.1| protease IV [Vibrio mimicus MB-451] gi|261892094|gb|EEY38080.1| protease IV [Vibrio mimicus MB-451] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 22 VVYFSWSSHVE----DNSPHVARIAIRGQIEDSQE--------LIERIERISRDDS-ATA 68 + Y+ + + V+ + + +A + G I D + + + R +R+DS A Sbjct: 307 ISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSS 185 L GSIG+ + L+ LG+ V ++P + + ++ A+Q+ ++ Sbjct: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGVTTGLTQGAKDAIQLG---IEHG 483 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 484 YQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 >gi|153826825|ref|ZP_01979492.1| protease IV [Vibrio cholerae MZO-2] gi|149739346|gb|EDM53592.1| protease IV [Vibrio cholerae MZO-2] Length = 616 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L+ LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVCQTL 292 >gi|205352978|ref|YP_002226779.1| protease 4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272759|emb|CAR37677.1| protease IV [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628052|gb|EGE34395.1| protease 4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 618 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D +A I G I D +E +I D +++ Sbjct: 311 ISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKTIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L G Sbjct: 371 RVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ L +GV V +SP+ A+ S ++P+ QMMQ ++ Y F+ Sbjct: 431 SIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTKALSPEVQQMMQLSIEYGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R ++ ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD------AVAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 >gi|297181012|gb|ADI17213.1| periplasmic serine proteases (clpp class) [uncultured delta proteobacterium HF0070_10I02] Length = 524 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 105/184 (57%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G++ S +++ IE ++ ++ A++++++SPGGSA A + I R++ +K +KPV+ + Sbjct: 251 GRVIASDDVVPVIEELTDNEQIKAVVLAVNSPGGSALASDLISRSVMALKEKKPVLASMG 310 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY IS ++ I A + ++ GSIGV+ + L KLGV + +P Sbjct: 311 NVAASGGYYISAEAHEIWAHKATITGSIGVVGGKLVLGSALGKLGVHSSWMGPAPDPGLL 370 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +P + +P+ + + + Y F+ +V+ R D+ ++ GR+WTG++A GL+ Sbjct: 371 APHTRFHPEQRRRFRASLRRVYDRFISIVASGRGKTTDEIEPVAQGRVWTGSQAMDNGLV 430 Query: 225 DVVG 228 D +G Sbjct: 431 DSLG 434 >gi|262166101|ref|ZP_06033838.1| protease IV [Vibrio mimicus VM223] gi|262025817|gb|EEY44485.1| protease IV [Vibrio mimicus VM223] Length = 616 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 22 VVYFSWSSHVE----DNSPHVARIAIRGQIEDSQE--------LIERIERISRDDS-ATA 68 + Y+ + + V+ + + +A + G I D + + + R +R+DS A Sbjct: 307 ISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSS 185 L GSIG+ + L+ LG+ V ++P + + ++ A+Q+ ++ Sbjct: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGVTTGLTQGAKDAIQLG---IEHG 483 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 484 YQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 >gi|320539622|ref|ZP_08039286.1| protease IV (signal peptide peptidase) [Serratia symbiotica str. Tucson] gi|320030234|gb|EFW12249.1| protease IV (signal peptide peptidase) [Serratia symbiotica str. Tucson] Length = 618 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 12/224 (5%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 G + D E + ++ D A+++ ++SPGGS A E I + +++ KPV+ + Sbjct: 345 GTVGDDTTAAE-LRQVRLDPIIKAVVLRVNSPGGSVSASEVIRAELAEIRAAGKPVVVSM 403 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 MAAS GY IS ++ I+A+ ++L GSIG+ + LD +GV V +SP+ A+ Sbjct: 404 GGMAASGGYWISTPADYIIASPSTLTGSIGIFGIINTYERTLDSIGVHTDGVATSPL-AD 462 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + + P Q+MQ ++ Y F+ LV+++R + + ++ G +W G++AK GL Sbjct: 463 ITATKALPPAFSQIMQLSIEHGYKNFIDLVAKARKMVPQQVDQIAQGHVWLGSDAKANGL 522 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 +D +G ++ + + L K+K W K WF D +L+ Sbjct: 523 VDQLGDFDDAVKKVAELA------KLKQW---KLNWFVDTPSLT 557 >gi|301167932|emb|CBW27517.1| putative protease [Bacteriovorax marinus SJ] Length = 359 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 116/230 (50%), Gaps = 14/230 (6%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNS---PHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 +++ T TV F+ S V D+ +A I + G I ++E +E +E+ +D S A+ Sbjct: 68 ILMVFATFTVKVFNDESKVFDSQNKRGQIAVIEVSGPIMQAKETVELLEKAEKDKSVKAI 127 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR----------KPVITEVHEMAASAGYLISCASN 119 I+ ++SPGG+ + I+ I+++ + KP+ +AAS GY + A+ Sbjct: 128 ILRINSPGGAVGPTQEIYEEIRRIDSAYNPEDKTASGKPIYASFDAIAASGGYYLGAAAR 187 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ +L GSIGV+ + + + V VK+ K SP + + +M Sbjct: 188 KIYASPGTLTGSIGVIMNFTDLSKVFEYFKVKQTPVKAGKYKDIGSPHRSMTNEESGLMN 247 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVG 228 ++ + F+R + +R K ++ L+ G+I++G EAK++GL+D +G Sbjct: 248 KMIQVVHKQFMRDIEATRKEKLTKEILELAQGQIFSGEEAKELGLVDELG 297 >gi|153801836|ref|ZP_01956422.1| protease IV [Vibrio cholerae MZO-3] gi|124122608|gb|EAY41351.1| protease IV [Vibrio cholerae MZO-3] Length = 556 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 7/174 (4%) Query: 59 RISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R +R+DS A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS Sbjct: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKTAGKPVVVSMSSLAASGGYWISM 415 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKA 174 +++ IVA T+L GSIG+ + L LG+ V ++P + + ++ A Sbjct: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLSNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q+ ++ Y F+ LV+E R + L+ GR+WT +A+ +GL+D +G Sbjct: 476 IQLG---IEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEQFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|242277502|ref|YP_002989631.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] gi|242120396|gb|ACS78092.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] Length = 322 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 103/180 (57%), Gaps = 2/180 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAA 108 QE+ R++ + DD AL++ ++SPGGS A + ++ I + K + VI + ++AA Sbjct: 72 QEVSSRLKLAAEDDKIKALVLKINSPGGSVTASDILYNEIVRFKEKTGAKVIVNMMDVAA 131 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY +S ++ I+A T+L GSIGV+F P V+ +DK+GVS++ KS K PF Sbjct: 132 SGGYYVSLPADHIMAHPTTLTGSIGVIFIRPKVEGLMDKIGVSVEVSKSGRNKDMGFPFK 191 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+ +++ D++ F LV + R+I D+ + ++++ AKK GL+D +G Sbjct: 192 PDTPEQKKIIDDIIKDYADRFQGLVKKHRSISDDQLNTIFTAQVFSAQGAKKAGLVDSLG 251 >gi|242347949|ref|YP_002995510.1| peptidase family S49 family protein [Aeromonas hydrophila] gi|224831768|gb|ACN66899.1| peptidase family S49 family protein [Aeromonas hydrophila] Length = 319 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W S + +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS Sbjct: 62 WQS-TKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAVVLRINSPGGSPV 120 Query: 82 AGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ +A++ + K V + ++ AS GY I+ A++ I A SLVGSIGV+ Sbjct: 121 QAGRIYEEVKALRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG 180 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +DKLG+ +++ S KA PFS + + V+ ++ F+ V R Sbjct: 181 FGFTGLMDKLGIERRAITSGEHKALLDPFSPLTSDMKTFWEGVLSKTHQQFIERVKAGRG 240 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + G +W G +AK +GLID +G Sbjct: 241 DRLKDDQEVFSGLLWNGEQAKDIGLIDGLG 270 >gi|315498282|ref|YP_004087086.1| signal peptide peptidase sppa, 67k type [Asticcacaulis excentricus CB 48] gi|315416294|gb|ADU12935.1| signal peptide peptidase SppA, 67K type [Asticcacaulis excentricus CB 48] Length = 592 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 8/172 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNII 121 +D A++ +SSPGGS A E I RA+ K + KPV+ + + AAS GY +S ++ I Sbjct: 336 NDKVKAIVFRVSSPGGSDTASEQISRALAYAKKSGKPVVVSMGDYAASGGYWVSAGASAI 395 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV----KSSPMKAEPSPFSEVNPKAVQM 177 VA T+L GSIGV + + GV + + + + + PF++ K Q Sbjct: 396 VANPTTLTGSIGVYGGKMAIGEAASRFGVDFRQIGVGSEYAGAYSAGKPFTD---KQTQA 452 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +D+ Y+ F+ V+E R + ++ ++ GR+WTGA+AK++GL+D GG Sbjct: 453 ISNWMDTIYNAFIGHVAEGRKLAPERVREIAKGRVWTGAQAKQLGLVDETGG 504 >gi|157962074|ref|YP_001502108.1| signal peptide peptidase SppA [Shewanella pealeana ATCC 700345] gi|157847074|gb|ABV87573.1| signal peptide peptidase SppA, 67K type [Shewanella pealeana ATCC 700345] Length = 613 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 100/175 (57%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYL 113 E + + DDS A+++ + SPGGSA+A E I + + +K KPV+ + AAS GY Sbjct: 353 ELLRKARFDDSIKAVVLRVDSPGGSAFASEQIRQEVLALKAANKPVVVSMGSYAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L +GV V +S A S ++P+ Sbjct: 413 ISASADYIYATPTTLTGSIGIFGMITTFEDSLASIGVHTDGVGTSEW-AGFSVTKGLSPQ 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ Y+ F+ LV++ R++ D+ ++ GR+WTG +A ++GL+D +G Sbjct: 472 IQAVIQRHIERGYYDFISLVAKERDMSLDQVDSIAQGRVWTGRKALELGLVDGLG 526 >gi|149175995|ref|ZP_01854612.1| SppA [Planctomyces maris DSM 8797] gi|148845149|gb|EDL59495.1| SppA [Planctomyces maris DSM 8797] Length = 343 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 119/226 (52%), Gaps = 6/226 (2%) Query: 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +A I+I G I ++ ++E I+ D +++ + SPGG I+ + + Sbjct: 73 SDKIAIISITGTIMPPFTERILESIKTAHEDKQVKGILLEIDSPGGLVADSHQIYHRLVE 132 Query: 93 VKNRKPVITEVHEMAASAGYLISCAS---NIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ +KP++ + MAAS GY ++ + +I A T+ GS+GV+ + +K+G Sbjct: 133 LRKKKPIVVSMKRMAASGGYYVAMGAGEEGVIFAEPTTWTGSLGVIIPRFDLSGLAEKVG 192 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 V +K+ K +PF E+ + + ++D SY F+ +++++R ++ Y++ L+ Sbjct: 193 VVSDPLKTGEFKDALNPFREMTQRERDIWDHILDESYQRFLNIITDNRKDLDYEQVKKLA 252 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 G+I+ +A++ GLID +G QE+ L + + +R I+ +P Sbjct: 253 TGQIYPATDARENGLIDEIGYQEDALARLQEMTNLKKVRVIRYRHP 298 >gi|254818384|ref|ZP_05223385.1| hypothetical protein MintA_00577 [Mycobacterium intracellulare ATCC 13950] Length = 595 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 103/171 (60%), Gaps = 7/171 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DDS +A++V ++SPGGS A E ++R ++K + R KPV+ + +AAS GY I+ A++ + Sbjct: 345 DDSVSAIVVRVNSPGGSVTASETLWREVKKARKRGKPVVASMGSVAASGGYYIAVAADAV 404 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMM 178 VA+ ++ GSIGVL ++ L +LGV +V+++ A +PF+ P+ Sbjct: 405 VASPATITGSIGVLTGKLVIRDLLGRLGVGSDTVRTNANADAWAIDTPFT---PEQRAHR 461 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D Y FV V++ RN+ D ++ GR+WTGA+A + GL+D +GG Sbjct: 462 EAEADLLYADFVARVADGRNLTKDAVDRVARGRVWTGADALERGLVDELGG 512 >gi|261209833|ref|ZP_05924135.1| protease IV [Vibrio sp. RC341] gi|260841131|gb|EEX67651.1| protease IV [Vibrio sp. RC341] Length = 616 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 15/207 (7%) Query: 34 NSPHVARIAIRGQIEDSQE--------LIERIERISRDDS-ATALIVSLSSPGGSAYAGE 84 N+ +A + G I D + + + R +R+DS A+++ + SPGGSA+A E Sbjct: 323 NASDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASE 382 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + Sbjct: 383 VIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEK 442 Query: 144 FLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L+ LG+ V ++P + + ++ A+Q+ ++ Y F+ LV+E R + Sbjct: 443 GLNNLGIYTDGVGTTPFSGQGVTTGLTQGAKDAIQLG---IEHGYQRFISLVAEKRGMTL 499 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+WT +A+ +GL+D +G Sbjct: 500 KAVDDIAQGRVWTAQDAQTLGLVDQLG 526 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 +++E + D++ T L+++L P + I +AI + K + KPV S Sbjct: 96 DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL S A I +A + +++ G Y K L+KL V+ + K+ PF Sbjct: 156 QYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVR 214 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL-------VSESRNIPYDKTLVLS-----------DGR 211 + M +S+ W +L V+ +R I KTL S +G Sbjct: 215 DD-----MSDAARESASRWLTQLWSAYVDDVAANRQIEI-KTLTPSMEEFVAQLKEVNGD 268 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 + A +KKVGL+D + +++V Q+L Sbjct: 269 L--AALSKKVGLVDELATRQQVRQTL 292 >gi|57241950|ref|ZP_00369890.1| protease IV (PspA) [Campylobacter upsaliensis RM3195] gi|57017142|gb|EAL53923.1| protease IV (PspA) [Campylobacter upsaliensis RM3195] Length = 293 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 107/204 (52%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 ++ RI ++G+I D+ ++E+I D + ++ + SPGG+ + AI+ +K + Sbjct: 45 NLERIDLKGEILDTGAVLEKIINAKNDPNIKGVLFFIDSPGGAFAPSMELALAIKDLKAQ 104 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPVI+ V AS YL A + I A + +GSIGV+ Q + K+GV +++K Sbjct: 105 KPVISYVAGTMASGSYLAGVAVDKIYANPAAFIGSIGVIAQGMNISELAQKIGVKEQTIK 164 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K + E + + +Q ++++SY FV V++ R + D+ +D R++ Sbjct: 165 AGTFKEAGTFTREWSEEERAYLQRLINNSYMLFVEFVAKERGLKVDEKEKWADARVFLAN 224 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 EAK +GLID + E+ + L L Sbjct: 225 EAKNLGLIDSLSNYEQAKKELEIL 248 >gi|300311214|ref|YP_003775306.1| periplasmic serine protease [Herbaspirillum seropedicae SmR1] gi|300073999|gb|ADJ63398.1| periplasmic serine protease (ClpP class) protein [Herbaspirillum seropedicae SmR1] Length = 343 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 12/229 (5%) Query: 11 RYVMLSLVTLTV-VYFSWSSHVEDN--SPHVARIAIRGQIEDSQE-----LIERIERISR 62 R +L++V L V + F+++ +E+ PH A + I+G I+ + +I +++ Sbjct: 63 RIALLAVVVLGVWMAFTFN-RIENEPLGPHTALVEIKGAIDSEGQGSAGVVIPALDKAFA 121 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCASN 119 + + +I+ ++SPGGS I I +++ +KP+ V E+ AS GY I+ A++ Sbjct: 122 ANDSVGVILKINSPGGSPVQAGMINDEITRLRKQYPKKPIYVVVEEVCASGGYYIAAAAD 181 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I + SLVGS+GVL +DKLGV + + + K+ PFS +PK + Q Sbjct: 182 KIFVNKASLVGSVGVLMDGFGFTGLMDKLGVERRLLTAGENKSFLDPFSPQSPKQREYAQ 241 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + F+ +V + R +T G +WTG++A ++GL D G Sbjct: 242 SMLQEIHQQFIEVVRQGRGARLKETPDTFSGLVWTGSKAVELGLADGFG 290 >gi|292488447|ref|YP_003531329.1| protease IV [Erwinia amylovora CFBP1430] gi|292899636|ref|YP_003539005.1| protease IV [Erwinia amylovora ATCC 49946] gi|291199484|emb|CBJ46601.1| protease IV [Erwinia amylovora ATCC 49946] gi|291553876|emb|CBA20921.1| protease IV [Erwinia amylovora CFBP1430] gi|312172589|emb|CBX80845.1| protease IV [Erwinia amylovora ATCC BAA-2158] Length = 617 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 13/214 (6%) Query: 27 WSSHVEDNSP--HVARIAIRGQIEDSQELIERIE--------RISR-DDSATALIVSLSS 75 + V+D+S +VA I G I D +E + R +R D A++ ++S Sbjct: 314 YDYQVKDSSSDGNVAVILASGAIADGEETPGSVGGDTTALQIRAARLDPKIKAIVFRVNS 373 Query: 76 PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGGS A E I + K+ KPV+ + MAAS GY +S ++ I+A+ +L GSIG+ Sbjct: 374 PGGSVTASETIREELAAAKDAGKPVVVSMGGMAASGGYWVSTPADYIIASPNTLTGSIGI 433 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 V+ L+ +GV V +SP+ A+ + + + QM Q +D Y F+ LV+ Sbjct: 434 FSVINTVENSLEAIGVHTDGVSTSPL-ADVASTRALPAEVQQMTQLSIDKGYQNFIDLVA 492 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +SR+ + ++ G +WTG++AK GLID +G Sbjct: 493 KSRHKTPGEIDQIAQGHVWTGSDAKANGLIDALG 526 >gi|281418096|ref|ZP_06249116.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum JW20] gi|281409498|gb|EFB39756.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum JW20] Length = 326 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 20/237 (8%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +P++ +++ G I DS +E ++ IE + S +++ ++SPGG Y Sbjct: 49 TPYIGVVSVEGTIMDSNSTTSFLSNGYNHKETLKLIEDMKNSASNKGILLYVNSPGGGVY 108 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + ++ +++ K +PV T + A S GY IS AS+ + + + GSIGV+ Sbjct: 109 ESDELYLKLKEYKEETGRPVWTYMSNQACSGGYYISMASDKVFSNRNAWTGSIGVIISLT 168 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K D LG+ + S KA + E+ + ++Q +VD +Y FV +V+E R + Sbjct: 169 NLKGLYDNLGIKGIYITSGRNKAMGAADLELTDEQRDILQSLVDEAYEQFVEIVAEGRKM 228 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ ++DGRI + +A ++ LID + +EV ++ A + +K + P K Sbjct: 229 TVEEVKRIADGRILSAKQALELNLIDEIATYDEVKEAFSA-----ELGNVKIYTPKK 280 >gi|125973935|ref|YP_001037845.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum ATCC 27405] gi|256005058|ref|ZP_05430029.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum DSM 2360] gi|125714160|gb|ABN52652.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Clostridium thermocellum ATCC 27405] gi|255991026|gb|EEU01137.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum DSM 2360] gi|316939864|gb|ADU73898.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum DSM 1313] Length = 326 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 20/237 (8%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +P++ +++ G I DS +E ++ IE + S +++ ++SPGG Y Sbjct: 49 TPYIGVVSVEGTIMDSNSTTSFLSNGYNHKETLKLIEDMKNSASNKGILLYVNSPGGGVY 108 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + ++ +++ K +PV T + A S GY IS AS+ + + + GSIGV+ Sbjct: 109 ESDELYLKLKEYKEETGRPVWTYMSNQACSGGYYISMASDKVFSNRNAWTGSIGVIISLT 168 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K D LG+ + S KA + E+ + ++Q +VD +Y FV +V+E R + Sbjct: 169 NLKGLYDNLGIKGIYITSGRNKAMGAADLELTDEQRDILQSLVDEAYEQFVEIVAEGRKM 228 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ ++DGRI + +A ++ LID + +EV ++ A + +K + P K Sbjct: 229 TVEEVKRIADGRILSAKQALELNLIDEIATYDEVKEAFSA-----ELGNVKIYTPKK 280 >gi|149176651|ref|ZP_01855263.1| Periplasmic serine protease [Planctomyces maris DSM 8797] gi|148844530|gb|EDL58881.1| Periplasmic serine protease [Planctomyces maris DSM 8797] Length = 603 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 + G + S I+ + + + DD A++V + SPGGSA A + ++RA+++ KP++ Sbjct: 330 LGGNVLGSDTFIKAVHKAADDDQVKAIVVRVDSPGGSALASDLMWRALEEAG--KPIVVS 387 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++AAS GY IS + I A +L GSIGV+ ++ K+G++ + Sbjct: 388 MGDVAASGGYYISMGAERIFAEPGTLTGSIGVVGGKLAIEGLYKKIGITTSVISRGSNSG 447 Query: 163 EPSP---FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 SP F+E AV M + + Y F + R + Y+K L+ GR++TG A Sbjct: 448 TFSPLNGFTESERVAVTGMLNAI---YKQFTEKAAAGRKMDYNKLEALARGRVYTGEMAL 504 Query: 220 KVGLIDVVGGQEEVWQSLYALG 241 K+GL+D +G +E LG Sbjct: 505 KLGLVDQLGTLDEAIDHARKLG 526 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%) Query: 48 EDSQELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 E +++ R+E+ S D S T +++ + G A E + +AIQKV+ + E Sbjct: 67 ESLSKVVSRLEKASEDKSLTGVVLHFKGTELGWAKLNE-LRQAIQKVRKSDKKVFAWIET 125 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV--SIKSVKSSPMKAEP 164 + YLI+ A + IV E++ + +G+ + + K D L + I V AEP Sbjct: 126 GMTKDYLIASACDQIVMPESASLILLGLRAEVSFYKNLFDILDIKPDILRVGKYKSAAEP 185 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +E++ + M+ ++D+ + ++S SR + +K +G + AEAKK+GLI Sbjct: 186 YTRTEMSEAFREEMEALLDNYFGQITGMISASRGLSAEKVEAAINGGPYMAAEAKKLGLI 245 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDW 252 D + ++++ + L ++ IK + Sbjct: 246 DHIAYEDQLPKLLTGEDSKNEVKLIKKY 273 >gi|317182638|dbj|BAJ60422.1| protease IV [Helicobacter pylori F57] Length = 292 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSTPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGIMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|308187053|ref|YP_003931184.1| protease IV [Pantoea vagans C9-1] gi|308057563|gb|ADO09735.1| protease IV [Pantoea vagans C9-1] Length = 620 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A + G I D +E +I D A+I+ ++SPGGS A EAI Sbjct: 329 NIAVVMASGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIILRVNSPGGSVTASEAIR 388 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + KP++ + MAAS GY IS ++ IVA ++L GSIG+ ++ LD Sbjct: 389 EELAAAQAAGKPIVVSMGGMAASGGYWISTPASYIVANPSTLTGSIGIFGVINTLENSLD 448 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ S + + Q+M +++ Y FV LV++SR+ ++ Sbjct: 449 SIGVHTDGVATSPL-ADISTTKALPAEVQQLMHLTIENGYRNFVGLVAKSRHKTPEQIDA 507 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG++AK GL+D +G Sbjct: 508 IAQGHVWTGSDAKANGLVDALG 529 >gi|253989459|ref|YP_003040815.1| protease 4 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780909|emb|CAQ84071.1| protease iv (endopeptidase iv) (signal peptide peptidase) [Photorhabdus asymbiotica] Length = 618 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 30/271 (11%) Query: 37 HVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A I +G I D Q+ +I + DD+ A+++ ++SPGGS A + I Sbjct: 327 NIAVIVAQGAIIDGQQASGMVGGDTTAAQIRQARLDDNIKAVVLRVNSPGGSVSASDVIR 386 Query: 88 RAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++ KPV+ + MAAS GY IS +N I+A +++L GSIG+ + LD Sbjct: 387 TELAALRAANKPVVVSMGGMAASGGYWISTPANYIIANQSTLTGSIGIFGVITTYENSLD 446 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +G+ V ++P+ A+ S ++ + ++MQ +++ Y F+ LV+++RN ++ Sbjct: 447 HVGIHTDGVSTTPL-ADISFTKGLSKEFSELMQLNIENGYKNFIGLVADARNKTPEEVDK 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK----DWNPPKNYWFCD 262 ++ G +W G +AK GL+D +G ++ A+ + K+ DW P+ Sbjct: 506 IAQGHVWIGNDAKTNGLVDQLGDFDD------AVAKAAELAKLDKPELDWMQPE------ 553 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 +S S LL + + Q ++ W P Sbjct: 554 ---MSFSELLINQLTATTQARIPEAIQAWLP 581 >gi|159476306|ref|XP_001696252.1| signal peptide peptidase [Chlamydomonas reinhardtii] gi|158282477|gb|EDP08229.1| signal peptide peptidase [Chlamydomonas reinhardtii] Length = 744 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 112/196 (57%), Gaps = 1/196 (0%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVH 104 Q+ D+ +L ++ ++ D A++V ++SPGGSA A ++I+ +Q+++ KPV+ + Sbjct: 431 QVIDATKLSAQLNQLLEDPDVRAVVVRVNSPGGSALASDSIYHELQRLRAAGKPVVVSMG 490 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY I+ A++ +VA ++ GSIGV+ V L+ +GV + V Sbjct: 491 DVAASGGYYIAAAADAVVAQPGTVTGSIGVVAGKINVGRTLEDVGVRSEGVTVGRNADML 550 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 SPF+ + P+ ++ +VD Y F+ V++SR P + L+ GR++TG +A +GL+ Sbjct: 551 SPFTGLAPEQAAQVEALVDHVYDDFLDKVAKSRGRPVSEVRQLAKGRVYTGQQAYDIGLV 610 Query: 225 DVVGGQEEVWQSLYAL 240 D +GG E AL Sbjct: 611 DQLGGLEAAVSRAKAL 626 >gi|317178138|dbj|BAJ55927.1| protease IV [Helicobacter pylori F16] Length = 292 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + ++RI Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDRI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ +A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKI 239 >gi|120402354|ref|YP_952183.1| signal peptide peptidase SppA, 67K type [Mycobacterium vanbaalenii PYR-1] gi|119955172|gb|ABM12177.1| signal peptide peptidase SppA, 67K type [Mycobacterium vanbaalenii PYR-1] Length = 594 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 23/210 (10%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++ + SPGGS E I+R + + + R KPV+ + +AAS GY +S A++ IVA ++ Sbjct: 351 VLRVDSPGGSVTGSETIWREVVRTRERGKPVVASMGAVAASGGYYVSMAADAIVANPGTI 410 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP----SPFSEVNPKAVQMMQDVVDS 184 GSIGVL + D+LGV +V+++ A+ +PF++ V+ D+ Sbjct: 411 TGSIGVLTGKLVARELKDRLGVGSDTVRTN-ANADAWSINAPFTDEQQAHVEAEADLF-- 467 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSLYALGVD 243 Y FV+ V+E R++ + ++ GR+WTGA+A + GL+D +GG + + ++ G+D Sbjct: 468 -YRDFVQRVAEGRHLSVEAVEQVARGRVWTGADALERGLVDELGGLRTAIRRAKVLAGID 526 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + R +++NL SSLL+ Sbjct: 527 EDTR-------------VEVENLPSSSLLD 543 >gi|255541922|ref|XP_002512025.1| Protease, putative [Ricinus communis] gi|223549205|gb|EEF50694.1| Protease, putative [Ricinus communis] Length = 578 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 7/183 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ IE+I ++ A I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 304 EQFIEKIRQVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLAETKPVIASMSDVAASG 363 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPSP 166 GY ++ A+ IVA +L GSIGV+ + +K+G + + + + AE P Sbjct: 364 GYYMAMAAGAIVAENLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAELLAAEQRP 423 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P ++ ++Y F + SR++P +K ++ GR+WTG +A GL+D Sbjct: 424 ---LRPDEAELFARSAQNAYQQFRDKAAFSRSMPVNKMEEVAQGRVWTGKDAASRGLVDA 480 Query: 227 VGG 229 +GG Sbjct: 481 IGG 483 >gi|54297662|ref|YP_124031.1| hypothetical protein lpp1713 [Legionella pneumophila str. Paris] gi|53751447|emb|CAH12865.1| hypothetical protein lpp1713 [Legionella pneumophila str. Paris] Length = 318 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 25/290 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ + +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRTIILVVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASA 110 + IE+ R ALIV ++SPGGS E I+ +Q K+ KP I +M ASA Sbjct: 90 TKGIEKAYRSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ ++ I A+ S+VGSIGVL+ + +V L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDA-LQKLGISRRLQTSGVNKAFLDPFSP 208 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 209 TTEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALANGLIDGYAS 268 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 ++ + + I I D+ +N + KNL + + D +P++ Sbjct: 269 SGQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVI 310 >gi|254779946|ref|YP_003058053.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori B38] gi|254001859|emb|CAX30109.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori B38] Length = 292 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESTPSTPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKI 239 >gi|78185347|ref|YP_377782.1| peptidase S49, SppA [Synechococcus sp. CC9902] gi|78169641|gb|ABB26738.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Synechococcus sp. CC9902] Length = 270 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 120/225 (53%), Gaps = 6/225 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI + G I + Q +++ + + R + AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARIVVEGPINGATRQRVLKALLEVKRRE-FPALLLRIDSPGGTVGDSQEIHAALLRLR 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V+ ++AS G I + IV+ ++ GSIGV+ + + +++G+ Sbjct: 71 EKGCRVVASFGNISASGGVYIGVGAEKIVSNPGTITGSIGVILRGNDLSRVFERIGIRFD 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP +NP+ ++Q ++DSSY FV +V++ RN+ + +DGR++ Sbjct: 131 TVKSGKFKDILSPDRALNPEERALLQGLIDSSYSQFVGVVAKGRNLTEETVKTFADGRVF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQ-SIRKIKDWNPPK 256 +G +A +GL+D +G ++ + L +DQ IR I P + Sbjct: 191 SGEQALSLGLVDELGDEDHALRLAAQLADLDQDDIRPITLGKPRR 235 >gi|182419438|ref|ZP_02950690.1| periplasmic serine protease [Clostridium butyricum 5521] gi|237666922|ref|ZP_04526907.1| signal peptide peptidase SppA, 36K type [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376769|gb|EDT74341.1| periplasmic serine protease [Clostridium butyricum 5521] gi|237658121|gb|EEP55676.1| signal peptide peptidase SppA, 36K type [Clostridium butyricum E4 str. BoNT E BL5262] Length = 331 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 2/181 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 + ++ + I+ + + +S +I+ ++SPGG Y + ++ +++ K + +PV T + Sbjct: 84 NHKKTLSYIDSMIKSNSNKGIILYVNSPGGGVYESDELYLKLKEYKEKTGRPVWTYMSSR 143 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A S GY IS AS+ I A GSIGV+ VK DKLG+ + S P KA S Sbjct: 144 ACSGGYYISMASDKIYANRNCWTGSIGVITSLVNVKGLYDKLGIEEIDITSGPNKAMGSS 203 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E+ + ++Q +VD +Y F +V+E R++ + ++DGR+++ +A ++GLID Sbjct: 204 GREMTDEQRAILQSLVDEAYDQFAGIVAEGRHMDIETVKPIADGRVYSANQALQLGLIDN 263 Query: 227 V 227 V Sbjct: 264 V 264 >gi|296491980|ref|YP_003662447.1| peptidase S49 SppA [Xenorhabdus nematophila ATCC 19061] gi|289176867|emb|CBJ93038.1| Peptidase S49, SppA [Xenorhabdus nematophila ATCC 19061] Length = 325 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 35 SPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF-- 87 +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS I+ Sbjct: 75 APHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAVVLRINSPGGSPVQAGRIYEE 134 Query: 88 -RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +A + + K V + ++ AS GY I+ +++ I A SLVGSIGV+ +D Sbjct: 135 VKAQRALHPEKKVYAIIDDIGASGGYYIASSADEIYADRASLVGSIGVISSGFGFTGLMD 194 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ +++ S KA PFS + + V+ ++ F+ V R Sbjct: 195 KLGIERRAITSGEHKALLDPFSPLTADMKTFWEGVLSKTHQQFIERVKAGRGERLKDDQK 254 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + G +W G +AK++GLID +GG V Sbjct: 255 VFSGLLWNGEQAKEIGLIDGLGGLNSV 281 >gi|296121657|ref|YP_003629435.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] gi|296013997|gb|ADG67236.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] Length = 649 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 129/240 (53%), Gaps = 14/240 (5%) Query: 22 VVYFSW--SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++Y S S+ NSP + G++ S+ I+ + ++ DD+ A+++ + SPGGS Sbjct: 356 ILYASGMISTGSSQNSP------LSGEVLGSETFIKAVRQLRDDDTVKAVVLRIDSPGGS 409 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A + ++ ++ +K +KP++ + ++A S GY I+ + I AA ++ GSIGV+ Sbjct: 410 ALASDLMWHELELLKAKKPLVASMSDVAGSGGYYIAMGTQKIYAAPGTVTGSIGVVGGKV 469 Query: 140 YVKPFLDKLGVSI---KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ +KLG+++ + K+S + + + F+E +A +++ + + Y F + Sbjct: 470 ALEKLYNKLGINVVVLERGKNSGVLSTTTGFTESQREATRLLMNEI---YEQFTSKAAAG 526 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + + L+ GRI++G A ++GL+D +G E+ + AL ++ K++ PK Sbjct: 527 RKMEVAQLEKLARGRIYSGNRALEIGLVDEIGTLEDAIKGAIALAKIENPAKLERLELPK 586 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%) Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A + YL++ A + IV E +++ GV + + K L K+ V + V+ K+ P Sbjct: 170 ADTTAYLLASACDKIVMPEPAMLMIPGVRAEVWFYKEMLSKIDVEPEVVRIGEFKSAGEP 229 Query: 167 FS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 ++ +++P+ + M +++D Y V ++ESR IP DK L D ++T +AK GL+ Sbjct: 230 YTRKDMSPEFKKEMDELLDDVYSQIVSTIAESRKIPADKVRELIDTAVFTSEKAKSAGLL 289 Query: 225 DVV 227 D V Sbjct: 290 DEV 292 >gi|55377494|ref|YP_135344.1| signal peptide peptidase SppA [Haloarcula marismortui ATCC 43049] gi|55230219|gb|AAV45638.1| putative signal peptide peptidase SppA [Haloarcula marismortui ATCC 43049] Length = 331 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 7/209 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++E+IER D + AL++ L++PGG E I A ++ P I ++ AS Sbjct: 94 ADDIVEQIERADSDRGSEALLLKLNTPGGEIVPSEDIRIAAEQFDG--PTIAYATDVCAS 151 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A E S+VGSIGV+ K D++G+S + + K P E Sbjct: 152 GGYDIAAGCDELWAREGSIVGSIGVVGSRVNAKELADRVGLSYEQFTAGEYKDAGVPLKE 211 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +Q +VD Y F+ V+E R + + L ++ RI+ G EA++ GL+D +G Sbjct: 212 MTADEREYLQSIVDDYYDQFIDTVAEGREMDA-EALKDTEARIFLGDEAEERGLVDRLGT 270 Query: 230 QEEVWQSL-YALGVDQSIRKIKDWNPPKN 257 +++V SL LG D + IK++ P + Sbjct: 271 RDDVEASLEQRLGEDVT---IKEYEPERG 296 >gi|54294636|ref|YP_127051.1| hypothetical protein lpl1713 [Legionella pneumophila str. Lens] gi|53754468|emb|CAH15952.1| hypothetical protein lpl1713 [Legionella pneumophila str. Lens] Length = 318 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 25/290 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ + +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRAIILVVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASA 110 + IE+ R ALIV ++SPGGS E I+ +Q K+ KP I +M ASA Sbjct: 90 TKGIEKAYRSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ ++ I A+ S+VGSIGVL+ + +V L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDA-LQKLGISRRLQTSGVNKAFLDPFSP 208 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 209 TTEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALANGLIDGYAS 268 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 ++ + + I I D+ +N + KNL + + D +P++ Sbjct: 269 SGQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVI 310 >gi|296329047|ref|ZP_06871553.1| signal peptide peptidase SppA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153851|gb|EFG94663.1| signal peptide peptidase SppA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 589 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 24/239 (10%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALI 70 Y+ S V+ N+ V I + G I +SQ E +E++ ++ A++ Sbjct: 303 YYKEGSMVDSNNI-VYVIPLEGDIVESQTEVFSGEENINVSETLEKLNIAKENNKVKAVV 361 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++SPGGSA + I + ++++ KPV + +AAS GY IS ++ I ++ G Sbjct: 362 LRVNSPGGSALTSDIIAKKVKELAEEKPVYVSMSSVAASGGYYISTNAHKIFVDRNTITG 421 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS---YH 187 SIGV+ P + GV+I+ + E S + + + +S+ Y Sbjct: 422 SIGVVSILPDFSKLITDNGVNIEKISD----GEYSDLYSADSFTEKKYNKIYNSNLKVYE 477 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ +VS+ R I +K +++GRIWTG EA K+GL D +GG E ++YA+ D ++ Sbjct: 478 DFLSVVSKGRRIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNE---TIYAIAEDNNM 533 >gi|157146039|ref|YP_001453358.1| protease 4 [Citrobacter koseri ATCC BAA-895] gi|157083244|gb|ABV12922.1| hypothetical protein CKO_01793 [Citrobacter koseri ATCC BAA-895] Length = 618 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 18/243 (7%) Query: 22 VVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 + Y+ +S D + + G I D +E +I D A+++ Sbjct: 311 ISYYDYSLKTPADTGDGIGVVFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I KPV+ + MAAS GY IS ++ IVA ++L G Sbjct: 371 RVNSPGGSVSASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ LD +GV V +SP+ A+ S + P+ QMMQ +++ Y F+ Sbjct: 431 SIGIFGVINTVENSLDSIGVHTDGVATSPL-ADVSVTKSLPPEVQQMMQLSIENGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+++R + ++ G +WTG +AK GL+D +G ++ A+ + K+K Sbjct: 490 TLVADARKSTPAQIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AIAKAAELAKLK 543 Query: 251 DWN 253 W+ Sbjct: 544 QWH 546 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + G + + I +A+++ ++ + V + + Sbjct: 99 DIVNTIRQAKDDRNITGIVMDLKNFAGADQPSMQYIGKALREFRDSGKPVFAVGDSYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ V+ +R IP + ++ GA+A GL V G Sbjct: 219 DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQ--------VFPGAQAMLDGLSKVDG 270 >gi|153948435|ref|YP_001400955.1| protease 4 [Yersinia pseudotuberculosis IP 31758] gi|152959930|gb|ABS47391.1| signal peptide peptidase SppA, 67K type [Yersinia pseudotuberculosis IP 31758] Length = 616 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 529 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 555 >gi|307130936|ref|YP_003882952.1| protease IV (signal peptide peptidase) [Dickeya dadantii 3937] gi|306528465|gb|ADM98395.1| protease IV (signal peptide peptidase) [Dickeya dadantii 3937] Length = 616 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D +E +I D A+++ ++SPGGS A E Sbjct: 322 NANEIAVVFASGTIVDGKETPGYVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + + KPV+ + MAAS GY IS +N I+A+ ++L GSIG+ + Sbjct: 382 LIRSELAAARQAGKPVVVSMGGMAASGGYWISTPANAIIASPSTLTGSIGIFGVVTTFEN 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD +GV V +SP+ A S + +A Q+MQ ++ Y F+ LV+ESR + Sbjct: 442 SLDSIGVHTDGVATSPLAAL-SQTKALPTEASQLMQLNIERGYQNFISLVAESRKKTPQE 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G++AK GL+D +G Sbjct: 501 VDEIAQGHVWVGSDAKTNGLVDQLG 525 >gi|77360352|ref|YP_339927.1| protease IV, a signal peptide peptidase [Pseudoalteromonas haloplanktis TAC125] gi|76875263|emb|CAI86484.1| protease IV, a signal peptide peptidase [Pseudoalteromonas haloplanktis TAC125] Length = 621 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 30/276 (10%) Query: 15 LSLVTLTVVYFSWSSHVEDN--SPHVARIAIRGQIEDSQELIERIE--------RISR-D 63 LSLV VV+ DN + VA + RG I D + I R +R D Sbjct: 308 LSLVKPPVVF--------DNPMTEKVAVVVARGTIVDGERKAGEIGGDSTAALLRNARLD 359 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIV 122 D A+++ + S GGS +A E I + +K KPVI + +AAS GY I+ A+N I Sbjct: 360 DKVKAVVLRIDSGGGSMFASEVIRAEVLALKAAGKPVIASMSSVAASGGYWIASAANEIW 419 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP---KAVQMMQ 179 AA +++ GSIGV + + L LGV V ++ M + FS P K Q++Q Sbjct: 420 AAPSTITGSIGVFGTFMTFENTLSNLGVYSDGVATTDM----AGFSITRPLDDKMAQVIQ 475 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ +Y F+ +V+++RN+ ++ ++ GR+W A+A+++GLID +G +++ ++ A Sbjct: 476 MSVEEAYGRFLDVVADARNMTPEQVDNIAQGRVWIAAKAQELGLIDKLGDKQDAIKAAAA 535 Query: 240 LGVDQ--SIRKIKDWNPPKNYWFCD-LKNLSISSLL 272 L ++ IK P+ D L N S+ S+L Sbjct: 536 LAKLNHYDVKTIKQSLSPQQKMIQDILGNASVKSML 571 >gi|22126048|ref|NP_669471.1| protease 4 [Yersinia pestis KIM 10] gi|108807515|ref|YP_651431.1| protease 4 [Yersinia pestis Antiqua] gi|108811791|ref|YP_647558.1| protease 4 [Yersinia pestis Nepal516] gi|149365915|ref|ZP_01887950.1| protease IV [Yersinia pestis CA88-4125] gi|165927734|ref|ZP_02223566.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. F1991016] gi|165939383|ref|ZP_02227931.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. IP275] gi|166009364|ref|ZP_02230262.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. E1979001] gi|166210495|ref|ZP_02236530.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. B42003004] gi|167401415|ref|ZP_02306912.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419969|ref|ZP_02311722.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426564|ref|ZP_02318317.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929262|ref|YP_002347137.1| protease 4 [Yersinia pestis CO92] gi|229897580|ref|ZP_04512736.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898225|ref|ZP_04513373.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. India 195] gi|229902086|ref|ZP_04517207.1| protease IV (signal peptide peptidase) [Yersinia pestis Nepal516] gi|270490735|ref|ZP_06207809.1| signal peptide peptidase SppA, 67K type [Yersinia pestis KIM D27] gi|294503792|ref|YP_003567854.1| protease IV [Yersinia pestis Z176003] gi|21959000|gb|AAM85722.1|AE013819_8 protease IV, a signal peptide peptidase [Yersinia pestis KIM 10] gi|108775439|gb|ABG17958.1| protease IV [Yersinia pestis Nepal516] gi|108779428|gb|ABG13486.1| protease IV [Yersinia pestis Antiqua] gi|115347873|emb|CAL20793.1| protease IV [Yersinia pestis CO92] gi|149292328|gb|EDM42402.1| protease IV [Yersinia pestis CA88-4125] gi|165912724|gb|EDR31353.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. IP275] gi|165920348|gb|EDR37625.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. F1991016] gi|165991919|gb|EDR44220.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. E1979001] gi|166207675|gb|EDR52155.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. B42003004] gi|166961664|gb|EDR57685.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049111|gb|EDR60519.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054440|gb|EDR64252.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680982|gb|EEO77077.1| protease IV (signal peptide peptidase) [Yersinia pestis Nepal516] gi|229688791|gb|EEO80859.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. India 195] gi|229693917|gb|EEO83966.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. PEXU2] gi|262365774|gb|ACY62331.1| protease IV [Yersinia pestis D182038] gi|270339239|gb|EFA50016.1| signal peptide peptidase SppA, 67K type [Yersinia pestis KIM D27] gi|294354251|gb|ADE64592.1| protease IV [Yersinia pestis Z176003] Length = 616 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 529 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 555 >gi|207108687|ref|ZP_03242849.1| signal peptide protease IV [Helicobacter pylori HPKX_438_CA4C1] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 125/241 (51%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ML L+ L V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS--FMLLLIVL--VFFSAKESTPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|170024325|ref|YP_001720830.1| protease 4 [Yersinia pseudotuberculosis YPIII] gi|169750859|gb|ACA68377.1| signal peptide peptidase SppA, 67K type [Yersinia pseudotuberculosis YPIII] Length = 616 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 529 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 555 >gi|45441763|ref|NP_993302.1| protease 4 [Yersinia pestis biovar Microtus str. 91001] gi|162421479|ref|YP_001606775.1| protease 4 [Yersinia pestis Angola] gi|229894836|ref|ZP_04510016.1| protease IV (signal peptide peptidase) [Yersinia pestis Pestoides A] gi|45436625|gb|AAS62179.1| protease IV [Yersinia pestis biovar Microtus str. 91001] gi|162354294|gb|ABX88242.1| signal peptide peptidase SppA, 67K type [Yersinia pestis Angola] gi|229702309|gb|EEO90328.1| protease IV (signal peptide peptidase) [Yersinia pestis Pestoides A] Length = 616 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 529 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 555 >gi|51596414|ref|YP_070605.1| protease 4 [Yersinia pseudotuberculosis IP 32953] gi|145598269|ref|YP_001162345.1| protease 4 [Yersinia pestis Pestoides F] gi|186895459|ref|YP_001872571.1| protease 4 [Yersinia pseudotuberculosis PB1/+] gi|51589696|emb|CAH21326.1| protease IV [Yersinia pseudotuberculosis IP 32953] gi|145209965|gb|ABP39372.1| protease IV [Yersinia pestis Pestoides F] gi|186698485|gb|ACC89114.1| signal peptide peptidase SppA, 67K type [Yersinia pseudotuberculosis PB1/+] Length = 616 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 350 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 409 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 410 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 468 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 469 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 528 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 529 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 555 >gi|149275724|ref|ZP_01881869.1| protease IV [Pedobacter sp. BAL39] gi|149233152|gb|EDM38526.1| protease IV [Pedobacter sp. BAL39] Length = 591 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 5/189 (2%) Query: 45 GQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 G+ D Q ERI R R D S A+++ ++SPGGSA A + I+R I K KPVI Sbjct: 323 GEGSDEQIGSERISRTIRKARSDSSVKAIVLRVNSPGGSALASDVIWREIVLAKKVKPVI 382 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSP 159 +AAS GY I CA++ I ++ GSIGV P + L+K LG++ VK+ Sbjct: 383 ASFGNVAASGGYYIGCAADSIFVQPNTITGSIGVFGVIPNFQKLLNKELGITFDGVKTGT 442 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 S + ++Q+ V+ +Y F+ V++ R + GR+W G +A Sbjct: 443 YADIMSVNRPLTAGERFIIQNEVNRTYDGFITRVADGRKRSKSYIDSIGGGRVWVGTDAV 502 Query: 220 KVGLIDVVG 228 ++GL D G Sbjct: 503 RLGLADRTG 511 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 22/214 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-----KNRKPVITEVHEM 106 ++I+ ++ D++ + +++SSP AG A + I+ K+RK +I Sbjct: 86 DIIKALDAAKTDNNIRCVYLNVSSPN----AGFANMKEIRDAMIDFRKSRKKIIAYSEVY 141 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + A YL S A I + E +L G+ + + K L+KLG+ + ++ K+ P Sbjct: 142 SQGAYYLASAADKIYLNPEGALEFK-GLSSEIMFFKGALEKLGIEAQIIRVGTYKSAVEP 200 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGL 223 F +++ K + + ++ Y F+ +S SR I D ++D +I +A K L Sbjct: 201 FINDKMSDKNREQVTVYLNGLYRTFLGGISASREIDADSLYAIADQYKIQQPNDALKYKL 260 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +D + +++V + L +K+ D +P N Sbjct: 261 VDQLAYKDKVLEEL---------KKLSDTDPSDN 285 >gi|153951329|ref|YP_001397333.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. doylei 269.97] gi|152938775|gb|ABS43516.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. doylei 269.97] Length = 298 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 116/236 (49%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILVPSANSSSKLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +K V+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKSVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERVLDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 >gi|262362087|gb|ACY58808.1| protease IV [Yersinia pestis D106004] Length = 579 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 313 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 372 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 373 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 431 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 432 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 491 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 492 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 518 >gi|217034551|ref|ZP_03439960.1| hypothetical protein HP9810_874g8 [Helicobacter pylori 98-10] gi|216942971|gb|EEC22454.1| hypothetical protein HP9810_874g8 [Helicobacter pylori 98-10] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESTPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|315585821|gb|ADU40202.1| signal peptide peptidase SppA [Helicobacter pylori 35A] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|262274575|ref|ZP_06052386.1| protease IV [Grimontia hollisae CIP 101886] gi|262221138|gb|EEY72452.1| protease IV [Grimontia hollisae CIP 101886] Length = 618 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 107/198 (54%), Gaps = 20/198 (10%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 +D+ A+++ + SPGGSA+A E I + +K KPV+ + +AAS GY IS ++N I Sbjct: 361 NDAIKAVVLRVDSPGGSAFASEVIRNEVDALKKAGKPVVVSMSSVAASGGYWISSSANRI 420 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPSPFSEVNPKAV 175 +A T++ GSIG+ + L K GV + ++P +A P S++ Sbjct: 421 LAQPTTITGSIGIFGILTTFEDVLAKYGVYNDGIGTTPFAGVGVTRALPDEISDI----- 475 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 MQ +++ Y F+ LV+ RN+ + ++ GR+WTG +A K GL+D +G ++ Sbjct: 476 --MQLGIENGYQRFIGLVASERNLSLEDVDQVAQGRVWTGYDAMKRGLVDQMGDFDD--- 530 Query: 236 SLYALGVDQSIRKIKDWN 253 A+ V + K+++++ Sbjct: 531 ---AIAVAAELAKVEEYS 545 >gi|332674201|gb|AEE71018.1| signal peptide peptidase SppA [Helicobacter pylori 83] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|297380616|gb|ADI35503.1| signal peptide peptidase SppA, 36K type [Helicobacter pylori v225d] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESTPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|317181116|dbj|BAJ58902.1| protease IV [Helicobacter pylori F32] Length = 292 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|258624166|ref|ZP_05719116.1| Periplasmic serine protease [Vibrio mimicus VM603] gi|258583597|gb|EEW08396.1| Periplasmic serine protease [Vibrio mimicus VM603] Length = 319 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W S + +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS Sbjct: 62 WQS-AKAGAPHTAYINIRGEIAAGTLADTDHLIPSIQAAFDNPNSQAIVLRINSPGGSPV 120 Query: 82 AGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ +A + + K V + ++ AS GY I+ A++ I A SLVGSIGV+ Sbjct: 121 QAGRIYDEVKAQRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG 180 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +DKLG+ +++ S KA PFS + + + V+ ++ F+ V R Sbjct: 181 FGFTGLMDKLGIERRAITSGEHKALLDPFSPLTSDMKKFWEGVLSKTHQQFIERVKAGRG 240 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + G +W G +AK +GLID +G Sbjct: 241 DRLKDDPEVFSGLLWNGEQAKDIGLIDGLG 270 >gi|167470630|ref|ZP_02335334.1| protease 4 [Yersinia pestis FV-1] Length = 586 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MAAS G Sbjct: 320 LAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGG 379 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +N IVA+ ++L GSIG+ + L +GV V +SP+ A+ S + Sbjct: 380 YWISTPANYIVASPSTLTGSIGIFGVINTFQNSLASIGVHTDGVATSPL-ADVSLTKALP 438 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D +G + Sbjct: 439 PEFSQMMQINIENGYKTFIDLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFD 498 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + A+ + K+K W + WF D +LS Sbjct: 499 D------AVKKAAELAKLKTW---QLNWFVDEPSLS 525 >gi|15612393|ref|NP_224046.1| putative protease IV [Helicobacter pylori J99] gi|4155951|gb|AAD06917.1| putative PROTEASE IV [Helicobacter pylori J99] Length = 292 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 123/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ +A K+ LID + Sbjct: 192 NLVNEQYQMFVDDVAKARKLNAKDYKDFAEGKVFSAQKALKLKLIDKI 239 >gi|19704606|ref|NP_604168.1| protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714902|gb|AAL95467.1| Protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 565 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 24/239 (10%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALI 70 Y+ S V+ N+ V I + G I +SQ E +E++ ++ A++ Sbjct: 279 YYKEGSMVDSNNI-VYVIPLEGDIVESQTEVFSGEENINVSETLEKLNIAKENNKVKAVV 337 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++SPGGSA + I + ++++ KPV + +AAS GY IS ++ I ++ G Sbjct: 338 LRVNSPGGSALTSDIIAKKVKELAEEKPVYVSMSSVAASGGYYISTNAHKIFVDRNTITG 397 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS---YH 187 SIGV+ P + GV+I+ + E S + + + +S+ Y Sbjct: 398 SIGVVSILPDFSKLITDNGVNIEKISD----GEYSDLYSADSFTEKKYNKIYNSNLKVYE 453 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ +VS+ R I +K +++GRIWTG EA K+GL D +GG E ++YA+ D ++ Sbjct: 454 DFLSVVSKGRRIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNE---TIYAIAEDNNM 509 >gi|300704627|ref|YP_003746230.1| peptidase s49 [Ralstonia solanacearum CFBP2957] gi|299072291|emb|CBJ43624.1| Peptidase S49 [Ralstonia solanacearum CFBP2957] Length = 350 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 +I R+V L ++ + F S+ + H A +A+ G+I ++ + +E Sbjct: 64 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVALDGEIAANTNASAENINASLEAA 123 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 124 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 183 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 184 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 243 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D VG + V +++ Sbjct: 244 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGVGSADFVARNV 303 >gi|227326088|ref|ZP_03830112.1| protease 4 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 616 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D E +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANTIISSASTLTGSIGIFGVITTFED 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ A+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPL-ADLSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G++AK+ GL+D +G Sbjct: 501 IDQIAQGHVWVGSDAKENGLVDQIG 525 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 28/223 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I + DD+ T +++ LS G + + I +A+++ ++ I V + + Sbjct: 97 DIVDSIRQAKSDDNITGMVLDLSDFTGADQPSLQYIGKALREFRDSGKPIYAVGDSYNQS 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N + V G Y K LDKL V+ + K+ P+ Sbjct: 157 QYYLASFANTVSLTPQGSVDLHGFATNNLYFKSMLDKLKVTTNIFRVGTYKSAVEPYLRD 216 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A +++ + ++ VS +R I + +++ GA + GL V G Sbjct: 217 DMSPAARDADGRWINALWQQYLNTVSANRQI--------TPQQLFPGATSIIAGLQAVQG 268 Query: 229 GQEEVWQSLYALG------------VDQSIRKIKDWNPPKNYW 259 YAL +QS+ K WN KN + Sbjct: 269 DTAR-----YALDNKLVDEVASRSVTEQSLVKAFGWNSQKNNF 306 >gi|208435302|ref|YP_002266968.1| signal peptide protease IV [Helicobacter pylori G27] gi|208433231|gb|ACI28102.1| signal peptide protease IV [Helicobacter pylori G27] Length = 292 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 123/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ +A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKI 239 >gi|14591350|ref|NP_143428.1| protease IV [Pyrococcus horikoshii OT3] gi|3257998|dbj|BAA30681.1| 334aa long hypothetical protease IV [Pyrococcus horikoshii OT3] Length = 334 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 7/209 (3%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYA 82 F S +V + VA + I G I+D L IE I RI +D+ ++V + SPGG Sbjct: 77 FIASRNVTYTNVTVAILPIFGPIDDESALNVIEVIRRIRENDTIKGVLVWIESPGGFVGP 136 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ ++K+ KPVI V A S GY I+CA+ IVA + VGSIGV++ + + Sbjct: 137 VREIYIELKKLDYIKPVIAYVSGYAYSGGYYIACAAKEIVANPLADVGSIGVIYVHFNAE 196 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + + G+ ++ K+ P K + + ++ P+ +++Q + + ++ F+++VSE RN+ + Sbjct: 197 KYYEMNGIEVEVFKTGPYKDMGADWRKLTPEERKIVQTQIQTYFNDFLQVVSEGRNMTVE 256 Query: 203 KTLVLSDGRIW-----TGAEAKKVGLIDV 226 + GR W G K+G +D+ Sbjct: 257 DVKKFATGRTWFAKDVNGTLVDKLGDLDL 285 >gi|317010195|gb|ADU80775.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori India7] Length = 292 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGIMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKI 239 >gi|302782103|ref|XP_002972825.1| hypothetical protein SELMODRAFT_173134 [Selaginella moellendorffii] gi|300159426|gb|EFJ26046.1| hypothetical protein SELMODRAFT_173134 [Selaginella moellendorffii] Length = 559 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 99/183 (54%), Gaps = 6/183 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S IE+I ++ + A+++ + SPGG A A + ++R ++ + +KPVI + ++AAS Sbjct: 289 SDTFIEQIRQVREAKNFKAVVLRIDSPGGDALASDLMWRELRLLAAKKPVIASMVDVAAS 348 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSP 166 GY ++ A+ +IVA +L GSIGV+ + +++G + I K + + AE P Sbjct: 349 GGYYMAMAAGVIVAERLTLTGSIGVVTGKLNLGKLYERVGFTKEVISRGKFAELDAEQRP 408 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F P+ + ++Y F + SR++ +K ++ GR+WTG A GL+D Sbjct: 409 F---RPEEAEFFGKSAKTAYKRFRDTAALSRSMQIEKMEEVAQGRVWTGKAAAARGLVDT 465 Query: 227 VGG 229 +GG Sbjct: 466 LGG 468 >gi|197119483|ref|YP_002139910.1| peptidase S49 family peptidase [Geobacter bemidjiensis Bem] gi|197088843|gb|ACH40114.1| peptidase, S49 family [Geobacter bemidjiensis Bem] Length = 293 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 124/229 (54%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 ++L L + VV + V + ++G I D QE + ++ + +D+ A+++ Sbjct: 17 LLLFLFCVGVVKVLLNDGDSLKGDGVGLVELKGLIVDGQETVRQLRELKKDERVKAVVLR 76 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I+ A++ V K V+ + +AAS GY + + +I A ++ GSI Sbjct: 77 IDSPGGVVGPSQEIYAAVKGVAKVKKVVVSMGSVAASGGYYAAAPATLIYANPGTITGSI 136 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL ++ ++ +DK+G+ ++K+ K SP ++ + M+Q V+DS++ F++ Sbjct: 137 GVLMKFSNIEGLMDKVGLKAFTIKTGKFKDVGSPVRTMSDEERGMLQGVIDSTHQQFIKA 196 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V+E R +P ++ ++DGRI++G +A L+D +G ++ + LG Sbjct: 197 VAEGRKLPVEQVRAIADGRIFSGEQALAAKLVDRIGTLQDAVEEAGRLG 245 >gi|254302877|ref|ZP_04970235.1| possible S49 family peptidase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323069|gb|EDK88319.1| possible S49 family peptidase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 589 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 23/232 (9%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPG 77 ++D++ + I + G I +SQ E +E++ D A+++ ++SPG Sbjct: 309 MDDSNNIIYVIPLEGDIVESQTEVFAGEENINVSETLEKLNIAKESDKVKAVVLRVNSPG 368 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA + I ++++ KPV + +AAS GY IS +N I ++ GSIGV+ Sbjct: 369 GSALTSDIIAEKVKELAEEKPVYVSMSSVAASGGYYISANANKIFVDRNTITGSIGVVSI 428 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS---YHWFVRLVS 194 P + GV+I+ + + E S + + + +S+ Y F+ +VS Sbjct: 429 LPDFSKLITDNGVNIEKIS----EGEYSDLYSSDSFTEKKYNKIYNSNLKVYEDFLNVVS 484 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + R I +K +++GRIWTG EA K+GL D +GG + ++YAL D + Sbjct: 485 KGRKIDKEKLKTIAEGRIWTGDEAIKIGLADEIGG---LNATIYALAEDNDM 533 >gi|227111464|ref|ZP_03825120.1| protease 4 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 616 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D E +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFED 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ A+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLENLGVHTDGVATSPL-ADLSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G++AK+ GL+D +G Sbjct: 501 IDQIAQGHVWVGSDAKENGLVDQIG 525 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 28/223 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I + DD+ T +++ LS G + + I +A+++ ++ I V + + Sbjct: 97 DIVDSIRQAKNDDNITGMVLDLSDFTGADQPSLQYIGKALREFRDSGKPIYAVGDSYNQS 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N + V G Y K LDKL V+ + K+ P+ Sbjct: 157 QYYLASFANTVSLTPQGSVDLHGFATNNLYFKSMLDKLKVTTNIFRVGTYKSAVEPYLRD 216 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A +++ + ++ VS +R I + +++ GA GL V G Sbjct: 217 DMSPAARDADGRWINALWQQYLNTVSANRQI--------TPQQLFPGATNIIAGLQAVQG 268 Query: 229 GQEEVWQSLYALG------------VDQSIRKIKDWNPPKNYW 259 YAL +QS+ K WN KN + Sbjct: 269 DTAR-----YALDNKLVDEVASRSVTEQSLVKAFGWNSQKNNF 306 >gi|257388867|ref|YP_003178640.1| signal peptide peptidase SppA, 36K type [Halomicrobium mukohataei DSM 12286] gi|257171174|gb|ACV48933.1| signal peptide peptidase SppA, 36K type [Halomicrobium mukohataei DSM 12286] Length = 331 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++++E+IER D + AL+V L++PGG E I A ++ P + ++ AS Sbjct: 94 AEDIVEQIERADDDSAVDALLVELNTPGGEIVPSEDIRLAAERFDG--PTVGYATDVCAS 151 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A E S+VGSIGV+ K D++G+S + + K +P E Sbjct: 152 GGYDIAAGCDELWAREGSIVGSIGVIGSRVNAKELADRVGLSYEQFTAGTFKDAGTPLKE 211 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +Q +VD Y FV V+E R + + ++ RI+ G+EA ++GL+D +G Sbjct: 212 FEQEEREYLQSIVDDYYEQFVDTVAEGRELDA-AEIRDTEARIFLGSEAHELGLVDEIGT 270 Query: 230 QEEVWQSL 237 + +V L Sbjct: 271 RRDVEAKL 278 >gi|254468276|ref|ZP_05081682.1| peptidase S49 [beta proteobacterium KB13] gi|207087086|gb|EDZ64369.1| peptidase S49 [beta proteobacterium KB13] Length = 316 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 3/183 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHE 105 ++++ I+ +++ ++D LIVS++SPGGS I I+++K KP+ V + Sbjct: 82 NAEDAIKSLQKAMKNDGTKGLIVSINSPGGSPVQSAMINDEIKRLKLIYPEKPIKVVVED 141 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + AS GY I+ A++ I A ++S+VGSIGVL ++KLG+ + + + K Sbjct: 142 VCASGGYFIAVAADDIYANKSSIVGSIGVLMNGFGFDQAIEKLGIERRLMTAGKNKGILD 201 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF ++P + +Q ++D + F+ V E R + + G W G A K+GLID Sbjct: 202 PFQPIDPTHRKHVQQLLDEVHQQFITAVKEGRGDRLSEDQSIFSGLFWNGESAYKLGLID 261 Query: 226 VVG 228 G Sbjct: 262 GFG 264 >gi|210135599|ref|YP_002302038.1| signal peptide protease IV [Helicobacter pylori P12] gi|210133567|gb|ACJ08558.1| signal peptide protease IV [Helicobacter pylori P12] Length = 292 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKI 239 >gi|167645285|ref|YP_001682948.1| signal peptide peptidase SppA, 67K type [Caulobacter sp. K31] gi|167347715|gb|ABZ70450.1| signal peptide peptidase SppA, 67K type [Caulobacter sp. K31] Length = 595 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 5/198 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNII 121 D A++ +SSPGGS A E I A++ K KPV+ + AAS GY IS ++ I Sbjct: 340 DKDVKAIVFRVSSPGGSDTASEQILAAVKAARKAGKPVVVSMGTYAASGGYWISSGASAI 399 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE-VNPKAVQMMQD 180 VA T+L GSIGV + L + GV + V A E P Sbjct: 400 VAEPTTLTGSIGVFGGKFALGEALARFGVDTRQVHVGGDYAGAFGTGEGFTPDQRAKFSA 459 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV---WQSL 237 +D Y FV V+E R++P ++ ++ GR+WTG +AK++GL+D +GG E +SL Sbjct: 460 WMDRIYAGFVGRVAEGRHLPPERVREIAKGRVWTGVQAKQLGLVDELGGFYEAVEKAKSL 519 Query: 238 YALGVDQSIRKIKDWNPP 255 L + ++KI N P Sbjct: 520 AGLKGEVKLKKIGASNSP 537 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 18/221 (8%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI-- 86 S E +P A GQ ++E + R D+ A++V L G + + + + Sbjct: 54 SDQESQNPFAAFSGGGGQ--SVMSIVETLRRAETDEKVKAVLVRLPEGGMAPASADELRL 111 Query: 87 ----FRAIQKVKNRKPVITEVHEMAASA----GYLISCASNIIVAAETSLVGSIGVLFQY 138 FRA+ K KP+ + S Y++ A++ S + ++G + Sbjct: 112 AFKHFRAVGK----KPIFAHSQGLYPSGLVTSTYMLGAAASEFWMQPDSSLQAVGAASEE 167 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + K F DK GV + + K +P+ S+ P + + S Y + ++ Sbjct: 168 MFFKRFFDKYGVKAEYEQRYEYKNAVNPYLYSDYTPAHRESTLSWMGSVYTSALTTAAQD 227 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 R + + + ++ EAK GLID VG +EV ++ Sbjct: 228 RKVDPAALVKTIEAGPYSAEEAKAKGLIDRVGQVKEVQDAM 268 >gi|218961332|ref|YP_001741107.1| putative Acid phosphatase [Candidatus Cloacamonas acidaminovorans] gi|167729989|emb|CAO80901.1| putative Acid phosphatase [Candidatus Cloacamonas acidaminovorans] Length = 819 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 11/203 (5%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITE 102 GQ + ++ I + +D +I+ + S GGSA A + I R ++ K +N+KP++ Sbjct: 549 GQKIAQETSVDLIRKARKDKQYKGIILRVDSGGGSAQASDIILRELELAKTENKKPIVVS 608 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + AAS GY ISC ++ I+A ++L GSIGV+ K+ V+ +VK K Sbjct: 609 MGGTAASGGYYISCNADKIIAEPSTLTGSIGVVGLMFNGTDMFQKIKVNWDTVK----KG 664 Query: 163 EPSPFSEVN----PKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAE 217 E + +N + QM+ +++ Y FV V R N+ ++ + GR+WTG + Sbjct: 665 EHADMVSINRPWTEEEKQMVIRNIENCYDDFVMKVDAGRPNMTLEQVKQYAQGRVWTGEQ 724 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A+K+GL+D +GG E+ +S+ L Sbjct: 725 AQKIGLVDELGGLEKAKESMSEL 747 >gi|149186505|ref|ZP_01864817.1| periplasmic serine protease [Erythrobacter sp. SD-21] gi|148829732|gb|EDL48171.1| periplasmic serine protease [Erythrobacter sp. SD-21] Length = 626 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 16/198 (8%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNII 121 D L+V + SPGGSA A E I AI + K + PV + +AAS GY ++ ++ I Sbjct: 347 DQDFAGLVVRVDSPGGSALASEEIRNAILRHKAKDIPVAVSMANVAASGGYWVATPADRI 406 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++ GSIG+ P + +GV+ V++ P+ +P P + P+ +++Q Sbjct: 407 FAEPETITGSIGIFALIPTFEDAAASIGVNSDGVQTGPLSGQPDPIAGFTPEVDRILQAS 466 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ----------- 230 ++ Y F+ V+ +R + ++ + GR+W G A+++ L+D GG Sbjct: 467 IEDGYTDFLTRVANARQMTLEQVDRVGQGRVWDGGTARQIRLVDEYGGMADALEWVAAQA 526 Query: 231 ---EEVWQSLYALGVDQS 245 +E W ++Y LG D+S Sbjct: 527 QLGDEKWSAVY-LGDDRS 543 >gi|90417463|ref|ZP_01225386.1| signal peptide peptidase SppA [marine gamma proteobacterium HTCC2207] gi|90330704|gb|EAS45983.1| signal peptide peptidase SppA [marine gamma proteobacterium HTCC2207] Length = 616 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 10/209 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSA 80 +V P +A + G I D + L E I +D A+++ + SPGGSA Sbjct: 318 NVNKGRPEIAVVVASGSIIDGNQPEGTIGGDTLAEMFSAIEDEDQVKAVVLRVDSPGGSA 377 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 +A + I +I ++ + PV+ + AAS GY I+ S+ I+A T++ GSIGV P Sbjct: 378 FASDVIRDSIASLRKKNIPVVISMGSYAASGGYWIATESDKILALSTTITGSIGVFGVIP 437 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L +G+ V ++ + + P+A +MQ V+ Y F+ LV+++R Sbjct: 438 TFEDSLSAMGIYSDGVGTTNIAGMMQLSRAMTPEAEMIMQSGVEHVYGRFLTLVADARES 497 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ GR+WTG +A ++GLID +G Sbjct: 498 TPSAIHKIAQGRVWTGKKALELGLIDELG 526 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 13/199 (6%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 +++++ ++ D+ T +++ GGS E I A+Q+ K KP+I + Sbjct: 91 RDMVQALDHAQYDERITHVLLDTDYISGGSIAKLEEISAALQRFKQSGKPIIAIGDNFSQ 150 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 S +L + A II+ S++ + G Y K LDKL +++ + K+ PF Sbjct: 151 SQYFLAAHADEIIMNPLGSVMLT-GFGSYSSYYKEALDKLKINVHIFRVGKYKSAVEPFL 209 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP--------YDKTLVLSDGRIWTGAEA 218 + ++ +A +D++DS + ++ V + R +P + L L++ A A Sbjct: 210 GTGMSEEARADRRDLLDSLWQFYTSRVEQLRGLPKGALNDLANNMHLKLAEENGDIAALA 269 Query: 219 KKVGLIDVVGGQEEVWQSL 237 + GL+D + + E L Sbjct: 270 LQQGLVDRIATRSETKAHL 288 >gi|254252862|ref|ZP_04946180.1| Periplasmic serine protease [Burkholderia dolosa AUO158] gi|124895471|gb|EAY69351.1| Periplasmic serine protease [Burkholderia dolosa AUO158] Length = 331 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I ++ ++ ++ Sbjct: 45 KIFFRFAFLGVFLLLAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANADDINTALD 104 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 105 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIKRLRAKYPDKPLYVVVTDMCASGGYYIA 164 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 165 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 224 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 225 AHAQELLDQVHAQFIKAVKDGRGKRLRETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 284 Query: 236 SL 237 + Sbjct: 285 DV 286 >gi|52841976|ref|YP_095775.1| signal peptide peptidase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629087|gb|AAU27828.1| signal peptide peptidase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 318 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 25/290 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRAIILAVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASA 110 + IE+ R ALIV ++SPGGS E I+ +Q K+ KP I +M ASA Sbjct: 90 TKGIEKAYRSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ ++ I A+ S+VGSIGVL+ + +V L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDA-LQKLGISRRLQTSGVNKAFLDPFSP 208 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 209 TTEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALASGLIDGYAS 268 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 ++ + + I I D+ +N + KNL + + D +P++ Sbjct: 269 SGQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVI 310 >gi|315638324|ref|ZP_07893504.1| signal peptide peptidase SppA [Campylobacter upsaliensis JV21] gi|315481591|gb|EFU72215.1| signal peptide peptidase SppA [Campylobacter upsaliensis JV21] Length = 293 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 107/204 (52%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 ++ RI ++G+I D+ ++E+I D + ++ + SPGG+ + AI+ +K + Sbjct: 45 NLERIDLKGEILDTGAVLEKIINAKNDPNIKGVLFFIDSPGGAFAPSMELALAIKDLKAQ 104 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPVI+ AS YL A++ I A + +GSIGV+ Q + K+G+ +++K Sbjct: 105 KPVISYAAGTMASGSYLAGVAADKIYANPAAFIGSIGVIAQGMNISELAQKIGIKEQTIK 164 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K + E + + +Q ++++SY FV V++ R + D+ +D R++ Sbjct: 165 AGTFKEAGTFTREWSEEERAYLQRLINNSYMLFVEFVAKERGLKVDEKEKWADARVFLAN 224 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 EAK +GLID + E+ + L L Sbjct: 225 EAKNLGLIDSLSNYEQAKKELEIL 248 >gi|193212213|ref|YP_001998166.1| signal peptide peptidase SppA, 67K type [Chlorobaculum parvum NCIB 8327] gi|193085690|gb|ACF10966.1| signal peptide peptidase SppA, 67K type [Chlorobaculum parvum NCIB 8327] Length = 578 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 18/234 (7%) Query: 20 LTVVYFSWSSHVEDNSPH-----VARIAIRGQI--------EDSQEL----IERIERISR 62 L V S+ S D PH +A I I G I D +E+ + R + Sbjct: 258 LVVNAGSYLSSTGDLEPHGTGNRIAVITINGLIVGDSIAGMGDDEEIDVASVRRAVDAAL 317 Query: 63 DDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DDS A+++ + SPGG A A ++ +++ +KP++ + AAS GY+++ A+N I Sbjct: 318 DDSKVKAIVLRIDSPGGEALAASSMLELLEEAAQKKPLVASMSGSAASGGYMVALAANKI 377 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++ GSIGV P L+K G+ + + +PF + A + + Sbjct: 378 YAQPLTVTGSIGVFALKPDFSGLLEKTGIHREVLTRGRFADAYTPFKPFDDAAFRKFVET 437 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Y F V++SR++ ++ ++ GR+W+G A +VGL+D +GG + Q Sbjct: 438 TGHIYEDFTGKVAKSRHLTAEQVEAVAGGRVWSGKRAVEVGLVDEIGGLNDAVQ 491 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/197 (18%), Positives = 85/197 (43%), Gaps = 22/197 (11%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS------------------QELIERIERISRDDSAT 67 SWS + + V R+ ++GQIE+ + L+ ++R D Sbjct: 17 SWSDKLPER--FVLRVPVKGQIEERSPDSGLFSFGQRAEPLSLEALMTILDRAQSDKRVE 74 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++++ + S + + +I ++ +T + A YL++ A + I+ + S Sbjct: 75 SVLLDIDGLSTSTAKIQELSSSIDALRKSGKKVTALLRTPADKDYLLAVACDSIIVQKNS 134 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSS 185 + G + + L KLG+ ++ + K+ P++ +P+++Q + ++D S Sbjct: 135 WMQLDGFKAELFFFAEPLKKLGIGFQAAQWKKYKSAIEPYTRNSPSPESLQELNSLLDDS 194 Query: 186 YHWFVRLVSESRNIPYD 202 + ++ V+ R+I D Sbjct: 195 WANYLDQVARRRHIGRD 211 >gi|188528198|ref|YP_001910885.1| protease IV (PspA) [Helicobacter pylori Shi470] gi|188144438|gb|ACD48855.1| protease IV (PspA) [Helicobacter pylori Shi470] Length = 292 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|167623955|ref|YP_001674249.1| signal peptide peptidase SppA [Shewanella halifaxensis HAW-EB4] gi|167353977|gb|ABZ76590.1| signal peptide peptidase SppA, 67K type [Shewanella halifaxensis HAW-EB4] Length = 613 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYL 113 E + + DDS A+++ + SPGGSA+A E I + + +K KP+I + AAS GY Sbjct: 353 ELLRQARFDDSVKAVVLRVDSPGGSAFASEEIRQEVLAIKAANKPIIVSMGSYAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L +GV V +S A S ++P+ Sbjct: 413 ISASADYIYATPTTLTGSIGIFGMVTTFEDSLASIGVHTDGVGTSEW-AGFSVTKGLSPQ 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ Y F+ LV+ R++ D ++ GR+WTG +A ++GL+D +G Sbjct: 472 IQAIIQRHIERGYQDFISLVASERDMSLDYVDSIAQGRVWTGRKALELGLVDGLG 526 >gi|163748928|ref|ZP_02156179.1| signal peptide peptidase SppA, 67K type [Shewanella benthica KT99] gi|161331304|gb|EDQ02192.1| signal peptide peptidase SppA, 67K type [Shewanella benthica KT99] Length = 615 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 5/186 (2%) Query: 45 GQIEDSQELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 GQI E ++ R +R DD A+++ + SPGGSA+A E I + + +K KPV+ Sbjct: 346 GQI--GGESTSQLLRKARFDDKIKAVVLRVDSPGGSAFASEQIRQEVLALKTAGKPVVVS 403 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + AAS GY IS +++ I A T+L GSIG+ + L LG+ V +S A Sbjct: 404 MGSYAASGGYWISASADYIYATPTTLTGSIGIFGMITTFEDSLSSLGIHTDGVATSQW-A 462 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S + P+ ++Q ++ YH F+ LV++ R++ + ++ GR+W+G +A ++G Sbjct: 463 GISVAKGLTPEIKSVIQRHIERGYHDFISLVAKERDMSLEDVDAIAQGRVWSGRKALELG 522 Query: 223 LIDVVG 228 LID +G Sbjct: 523 LIDELG 528 >gi|317013199|gb|ADU83807.1| protease IV (PspA) [Helicobacter pylori Lithuania75] Length = 292 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSTPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ +A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLNAKDYKDFAEGKVFSAQKALKLKLIDKI 239 >gi|118602039|ref|YP_908739.1| peptidase [Photobacterium damselae subsp. piscicida] gi|118614779|ref|YP_908562.1| peptidase [Photobacterium damselae subsp. piscicida] gi|134044555|ref|YP_001101707.1| signal peptide peptidase SppA domain-containing protein [Yersinia ruckeri] gi|134044941|ref|YP_001102082.1| signal peptide peptidase SppA domain-containing protein [Yersinia pestis biovar Orientalis str. IP275] gi|134047167|ref|YP_001101892.1| signal peptide peptidase SppA domain-containing protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|229516096|ref|ZP_04405546.1| hypothetical protein VCC_000110 [Vibrio cholerae RC9] gi|300925750|ref|ZP_07141608.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|118596870|dbj|BAF38174.1| peptidase [Photobacterium damselae subsp. piscicida] gi|118597048|dbj|BAF38351.1| peptidase [Photobacterium damselae subsp. piscicida] gi|133904918|gb|ABO40935.1| signal peptide peptidase SppA domain protein [Yersinia ruckeri] gi|133905086|gb|ABO41101.1| signal peptide peptidase SppA domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|133905475|gb|ABO42237.1| signal peptide peptidase SppA domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|229346876|gb|EEO11844.1| hypothetical protein VCC_000110 [Vibrio cholerae RC9] gi|300418172|gb|EFK01483.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|324007588|gb|EGB76807.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2] Length = 325 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W S + +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS Sbjct: 68 WQS-AKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAIVLRINSPGGSPV 126 Query: 82 AGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ +A + + K V + ++ AS GY I+ A++ I A SLVGSIGV+ Sbjct: 127 QAGRIYDEVKAQRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG 186 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +DKLG+ +++ S KA PFS + + + V+ ++ F+ V R Sbjct: 187 FGFTGLMDKLGIERRAITSGEHKALLDPFSPLTSDMKKFWEGVLSKTHQQFIERVKAGRG 246 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + G +W G +AK +GLID +G Sbjct: 247 DRLKDDPEVFSGLLWNGEQAKDIGLIDGLG 276 >gi|167586612|ref|ZP_02379000.1| peptidase S49 [Burkholderia ubonensis Bu] Length = 330 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS + + H A + I G+I ++ ++ + Sbjct: 45 KIFFRFAFLGVFLLLAFALIDFSSDAKFSTSGRHTAVVTIDGEIAAGVNANADDINTALN 104 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 105 AAFDDDGTVGVVLQINSPGGSPVQAGMVYDEIKRLRAKYPGKPLYVVVTDMCASGGYYIA 164 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL ++KLG+ + S K PFS PK Sbjct: 165 AAADRIYVDKASIVGSIGVLMDGFGFTGLMNKLGIQRRLHTSGENKGFYDPFSPETPKMD 224 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG + ++GL D G + V + Sbjct: 225 THAQALLDQVHAQFIKAVKDGRGARLHETPDMFSGLFWTGEKGVELGLADGFGTTDSVAR 284 Query: 236 SL 237 + Sbjct: 285 DV 286 >gi|50121267|ref|YP_050434.1| protease 4 [Pectobacterium atrosepticum SCRI1043] gi|49611793|emb|CAG75242.1| protease IV [Pectobacterium atrosepticum SCRI1043] Length = 616 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D E +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMSLRMAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFED 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ A+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPL-ADLSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G++AK+ GL+D +G Sbjct: 501 INEIAQGHVWVGSDAKENGLVDQIG 525 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 28/223 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I + DD+ T +++ LS G + + I +A+++ ++ I V + + Sbjct: 97 DIVDSIRQAKGDDNITGMVLDLSDFTGADQPSLQYIGKALREFRDSGKPIYAVGDSYNQS 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N + V G Y K LDKL V+ + K+ P+ Sbjct: 157 QYYLASFANTVSLTPQGSVDLHGFATNNLYFKSMLDKLKVTTNIFRVGTYKSAVEPYLRD 216 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A +++ + ++ VS +R I + +++ GA + GL V G Sbjct: 217 DMSPAARDADGRWINALWQQYLNTVSANRQI--------TPQQLFPGATSIIAGLQAVQG 268 Query: 229 GQEEVWQSLYALG------------VDQSIRKIKDWNPPKNYW 259 YAL +QS+ K WN KN + Sbjct: 269 DTAR-----YALDNKLVDEVASRSVTEQSLVKTFGWNNQKNNF 306 >gi|21674462|ref|NP_662527.1| protease IV [Chlorobium tepidum TLS] gi|21647650|gb|AAM72869.1| protease IV [Chlorobium tepidum TLS] Length = 597 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 1/217 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G D + E ++ D A+++ + SPGG A A + + + K +KP++ + Sbjct: 320 GDGTDVATVKEALQTAIDDLKVKAIVLRIDSPGGDALAASTMLELLNEAKAKKPIVASMS 379 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY+++ A + I A ++ GSIGV P + L+K G+ + + Sbjct: 380 GLAASGGYMVALAGDKIFAEPLTITGSIGVFSLKPDLSSLLEKTGIRREVLIRGRFADAE 439 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +PF + + + ++ + Y F+ V++ R++ + ++ GR+W+G A +VGLI Sbjct: 440 TPFRAFDDASFRKFVELTGTVYEDFIAKVAKGRHMTPAQVDAVAGGRVWSGKRALEVGLI 499 Query: 225 DVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWF 260 D +GG + Q L GV + ++ + P + W Sbjct: 500 DQIGGLGDAVQEAKKLAGVKKEVKPALLYLPAQKTWL 536 >gi|261838709|gb|ACX98475.1| signal peptide protease IV [Helicobacter pylori 51] Length = 292 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESTPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|170726647|ref|YP_001760673.1| signal peptide peptidase SppA [Shewanella woodyi ATCC 51908] gi|169811994|gb|ACA86578.1| signal peptide peptidase SppA, 67K type [Shewanella woodyi ATCC 51908] Length = 613 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + + DD A+++ + SPGGSA+A E I + + +K KPV+ + AAS GY Sbjct: 353 ELLRKARFDDQVKAVVLRVDSPGGSAFASEQIRQEVLALKTAGKPVVVSMGSYAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L +G+ V +S A S + P Sbjct: 413 ISASADYIYATPTTLTGSIGIFGMITTFEDSLSSIGIHTDGVATSEW-AGISVAKGLTPG 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q V+ YH F+ LV+ R++ D ++ GR+W+G +A +GL+D +G Sbjct: 472 IKDVIQRHVERGYHDFISLVANERDMSLDDVDSIAQGRVWSGRKALSLGLVDELG 526 >gi|261821537|ref|YP_003259643.1| protease 4 [Pectobacterium wasabiae WPP163] gi|261605550|gb|ACX88036.1| signal peptide peptidase SppA, 67K type [Pectobacterium wasabiae WPP163] Length = 616 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D E +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFED 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ A+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPL-ADLSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G++AK+ GL+D +G Sbjct: 501 IDQIAQGHVWVGSDAKENGLVDQIG 525 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 92/223 (41%), Gaps = 28/223 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I + DD+ T +++ LS G + + I +A+++ ++ I V + + Sbjct: 97 DIVDSIRQAKSDDNITGIVLDLSDFTGADQPSMQYIGKALREFRDSGKPIYAVGDSYNQS 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N + V G Y K LDKL V+ + K+ P+ Sbjct: 157 QYYLASFANTVSLTPQGSVDLHGFATNNLYFKSMLDKLKVTTNIFRVGTYKSAVEPYLRD 216 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A +++ + ++ VS +R I + +++ GA GL V G Sbjct: 217 DMSPAARDADGRWINALWQQYLNTVSANRQI--------TPQQLFPGATNILAGLQAVQG 268 Query: 229 GQEEVWQSLYALG------------VDQSIRKIKDWNPPKNYW 259 YAL +QS+ K+ WN KN++ Sbjct: 269 DTAR-----YALDNKLVDEVASRSVTEQSLVKVFGWNNQKNHF 306 >gi|269121370|ref|YP_003309547.1| signal peptide peptidase SppA, 36K type [Sebaldella termitidis ATCC 33386] gi|268615248|gb|ACZ09616.1| signal peptide peptidase SppA, 36K type [Sebaldella termitidis ATCC 33386] Length = 584 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 102/183 (55%), Gaps = 2/183 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E+I+++ + ++ +++ ++SPGGSA + E I++ ++ PV + AAS GY I Sbjct: 334 EKIKQLKKVNNLKGVVLRINSPGGSALSAELIYQMFSEMP--VPVYVSMGSTAASGGYYI 391 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A + I A ++++ GS+GV+ P +K LG+ S+ PF +++ ++ Sbjct: 392 AMAGDKIFADKSTITGSVGVVSTIPKIKKAAGNLGIDSSSITKGKYSDLYDPFVDLSEES 451 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++ + +Y F V ++R I DK + G++W G EAK++GL+D +G ++ Sbjct: 452 TERLRTSMQDTYKEFKSRVEKNRGISADKLEEYAQGKVWLGDEAKEIGLVDQIGSLDDTI 511 Query: 235 QSL 237 Q++ Sbjct: 512 QAM 514 >gi|165937987|ref|ZP_02226547.1| peptidase [Yersinia pestis biovar Orientalis str. IP275] gi|165914010|gb|EDR32627.1| peptidase [Yersinia pestis biovar Orientalis str. IP275] gi|327536450|gb|AEA95283.1| peptidase-like protein [Salmonella enterica subsp. enterica serovar Dublin] Length = 319 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W S + +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS Sbjct: 62 WQS-AKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAIVLRINSPGGSPV 120 Query: 82 AGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ +A + + K V + ++ AS GY I+ A++ I A SLVGSIGV+ Sbjct: 121 QAGRIYDEVKAQRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG 180 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +DKLG+ +++ S KA PFS + + + V+ ++ F+ V R Sbjct: 181 FGFTGLMDKLGIERRAITSGEHKALLDPFSPLTSDMKKFWEGVLSKTHQQFIERVKAGRG 240 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + G +W G +AK +GLID +G Sbjct: 241 DRLKDDPEVFSGLLWNGEQAKDIGLIDGLG 270 >gi|302805296|ref|XP_002984399.1| hypothetical protein SELMODRAFT_156630 [Selaginella moellendorffii] gi|300147787|gb|EFJ14449.1| hypothetical protein SELMODRAFT_156630 [Selaginella moellendorffii] Length = 559 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 99/183 (54%), Gaps = 6/183 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S IE+I ++ + A+++ + SPGG A A + ++R ++ + +KPVI + ++AAS Sbjct: 289 SDAFIEQIRQVREAKNFKAVVLRIDSPGGDALASDLMWRELRLLAAKKPVIASMVDVAAS 348 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSP 166 GY ++ A+ +IVA +L GSIGV+ + +++G + I K + + AE P Sbjct: 349 GGYYMAMAAGVIVAERLTLTGSIGVVTGKLNLGKLYERVGFTKEVISRGKFAELDAEQRP 408 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F P+ + ++Y F + SR++ +K ++ GR+WTG A GL+D Sbjct: 409 F---RPEEAEFFGKSAKTAYKRFRDTAALSRSMQIEKMEEVAQGRVWTGKAAAARGLVDT 465 Query: 227 VGG 229 +GG Sbjct: 466 LGG 468 >gi|317048414|ref|YP_004116062.1| signal peptide peptidase SppA, 67K type [Pantoea sp. At-9b] gi|316950031|gb|ADU69506.1| signal peptide peptidase SppA, 67K type [Pantoea sp. At-9b] Length = 618 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQELIERIE--------RISR-DDSATALIVSLSSPGGSAYAGEAIF 87 ++A + G I D +E + R +R D A+I+ ++SPGGS A EAI Sbjct: 327 NIAVVMASGAIMDGEETAGNVGGDTTAAQIRDARLDPKIKAIILRVNSPGGSVTASEAIR 386 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ L Sbjct: 387 EELAAAHAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVENSLS 446 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ A+ + + + Q+MQ +++ Y FV LV+ SR+ ++ Sbjct: 447 TIGVHTDGVATSPL-ADVATTKALPTEVQQLMQLTIENGYRNFVGLVAASRHKTPEQINE 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +WTG++AK GL+D +G Sbjct: 506 IAQGHVWTGSDAKANGLVDALG 527 >gi|308183529|ref|YP_003927656.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori PeCan4] gi|308065714|gb|ADO07606.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori PeCan4] Length = 292 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ A K+ LID + Sbjct: 192 NLVNEQYQMFVDDVAKARKLNAKDYKDFAEGKVFSAQNALKLKLIDKI 239 >gi|269138839|ref|YP_003295540.1| periplasmic serine protease (ClpP class), protease IV [Edwardsiella tarda EIB202] gi|267984500|gb|ACY84329.1| periplasmic serine protease (ClpP class), protease IV [Edwardsiella tarda EIB202] gi|304558830|gb|ADM41494.1| Protease IV [Edwardsiella tarda FL6-60] Length = 617 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 15/215 (6%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLI 114 +I + D + A+I+ ++SPGGS A E I A+ ++ KPV+ + +AAS GY I Sbjct: 354 QIRQARLDPAIRAIILRVNSPGGSVTASEEIRSALAAARDAGKPVVVSMGGLAASGGYWI 413 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S +N I+A+ ++L GSIG+ + L +LGV V +SP+ + ++ P++ Sbjct: 414 STPANAIIASPSTLTGSIGIFGVINTFEKPLSQLGVYTDGVATSPLA--DTALTKALPQS 471 Query: 175 V-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEE 232 V +MQ +++ Y F+ LV+ +R+ + ++ GR+W G +AK GL+D +G + Sbjct: 472 VSDLMQLTIENGYQRFISLVATARHKTPAQIDSIAQGRVWLGVDAKANGLVDRLGDFDDA 531 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 V Q+ G+ Q P+ W+ D + S Sbjct: 532 VSQAATLAGIKQ----------PQLRWYVDNPSFS 556 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 24/198 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGS-----AYAGEAI--FRAIQKVKNRKPVITEVH 104 +L+E + + D + T L++SL++ G+ Y G+A+ FRA + KP++ V Sbjct: 98 DLVETLRQAKSDPNITGLVLSLNNFAGADQPSLQYIGKALAEFRA-----SGKPILA-VG 151 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA-- 162 E A Y ++ +N I + VG G+ Y K LDKL VS + K+ Sbjct: 152 ESYTQAQYFLASYANKIYLSPQGSVGLQGMATNNLYYKSLLDKLDVSTHIFRVGTYKSAV 211 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 EP +++P+A ++ ++ ++ V+ +R+ L+ +++ GAE G Sbjct: 212 EPLMRDQMSPQARSADSQWLNGMWNNYLATVAANRH--------LTPEQVFPGAEQMLKG 263 Query: 223 LIDVVGGQEEVWQSLYAL 240 L GG + L+ L Sbjct: 264 L-QATGGDMAQYAVLHRL 280 >gi|226939994|ref|YP_002795067.1| SohB [Laribacter hongkongensis HLHK9] gi|226714920|gb|ACO74058.1| SohB [Laribacter hongkongensis HLHK9] Length = 312 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 14/229 (6%) Query: 11 RYVMLSLVTLTVV--YFSWSSHVEDN-----SPHVARIAIRGQIEDSQELIERI----ER 59 R L+++ L + + SW + D+ PH A I I G I + + +I + Sbjct: 32 RLTWLAVILLVALPLFASWFGNSNDSLPAGGRPHAAVIDINGVINNENDSARKISDGLKN 91 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 +D + +I+ +SPGGS + I++ K P V+ V E+ AS Y I+ Sbjct: 92 AYKDPNTRGIILRANSPGGSPVLSGMAYDEIRRQKTLHPDIPVLVAVEEVCASGCYYIAS 151 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + S+VGSIGVL + ++KLG+ + S K PFS P V Sbjct: 152 AADKIFANQASIVGSIGVLSEGFGFTGAMEKLGIERRLATSGRDKGMGDPFSPQTPAQVS 211 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 M Q+++D+ + F+ V + R L GR+W G++A +GLID Sbjct: 212 MRQELLDTIHGQFITAVRQGRGKRLKTGEDLFTGRVWVGSQAVPLGLID 260 >gi|237640201|ref|YP_002891056.1| peptidase S49 family protein [Escherichia coli] gi|237809921|ref|YP_002894360.1| peptidase S49 family protein [Escherichia coli] gi|237810110|ref|YP_002894549.1| peptidase S49 family protein [Salmonella enterica] gi|229561420|gb|ACQ77623.1| peptidase S49 family protein [Escherichia coli] gi|229561594|gb|ACQ77796.1| peptidase S49 family protein [Salmonella enterica] gi|229561776|gb|ACQ77977.1| peptidase S49 family protein [Escherichia coli] gi|332144543|dbj|BAK19763.1| peptidase S49 family protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 302 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W S + +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS Sbjct: 45 WQS-AKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAIVLRINSPGGSPV 103 Query: 82 AGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ +A + + K V + ++ AS GY I+ A++ I A SLVGSIGV+ Sbjct: 104 QAGRIYDEVKAQRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG 163 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +DKLG+ +++ S KA PFS + + + V+ ++ F+ V R Sbjct: 164 FGFTGLMDKLGIERRAITSGEHKALLDPFSPLTSDMKKFWEGVLSKTHQQFIERVKAGRG 223 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + G +W G +AK +GLID +G Sbjct: 224 DRLKDDPEVFSGLLWNGEQAKDIGLIDGLG 253 >gi|302383896|ref|YP_003819719.1| signal peptide peptidase SppA, 67K type [Brevundimonas subvibrioides ATCC 15264] gi|302194524|gb|ADL02096.1| signal peptide peptidase SppA, 67K type [Brevundimonas subvibrioides ATCC 15264] Length = 591 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 6/215 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S + E I D S A++ +SSPGGS A E I A++ K KPV+ + + AA Sbjct: 324 SDDTAEAIYDAIEDKSVKAIVFRVSSPGGSPEASEQILAAVRAAKAAGKPVVVSMGDYAA 383 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP-SPF 167 S GY IS +N IVA ++L GSIGV V L + GV ++ + A+ +P Sbjct: 384 SGGYWISSEANWIVAQPSTLTGSIGVFGGKFVVSEALGRFGVDLRGLSIGGDYADAFAPS 443 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +D +Y FV+ VS R +P + ++ GR+WTGA+ K +GL+D + Sbjct: 444 QSFTTTQRAAFSASMDRTYEEFVQRVSTGRRLPIARVREIARGRVWTGAQGKTLGLVDQL 503 Query: 228 GGQEEV---WQSLYALGVDQSIRKIKDWNPPKNYW 259 GG E + L + D S+R K + P++ W Sbjct: 504 GGLTEAIGKARELANIPADTSVR-FKRFPTPQSPW 537 >gi|108762546|ref|YP_635601.1| signal peptide peptidase SppA, 67K type [Myxococcus xanthus DK 1622] gi|108466426|gb|ABF91611.1| signal peptide peptidase SppA, 67K type [Myxococcus xanthus DK 1622] Length = 680 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 1/186 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 GQ ++ + + + + D A++ + SPGGS A + + R +Q+ K KPVI + Sbjct: 400 GQSMGAESVAAALRKATEDSRVKAIVFRVDSPGGSYVASDTVRREVQRAKEAGKPVIVTM 459 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 AAS GY ++ ++ IVA +L GSIGV F +KLGV+ SV + Sbjct: 460 GSYAASGGYFVAMEADRIVAHPGTLTGSIGVYAGKFVTAGFWEKLGVNFDSVAAGKNAEM 519 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 ++ P+ M +D Y F + SR +P +K L+ GR+WTG +A GL Sbjct: 520 FGSDADYTPEQQARMDASLDRIYADFTTRAAASRKLPLEKLQSLAKGRVWTGEDALAHGL 579 Query: 224 IDVVGG 229 +D +GG Sbjct: 580 VDALGG 585 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 8/194 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVI--TEVHEM 106 ++++E +E+ D +L+V + PG A A + + A++ + K +K V E+ Sbjct: 156 RDVVEALEKAGDDARVKSLLVRIGHPGTPA-ATQELRDAVKAFRAKGKKAVAYSDSFGEL 214 Query: 107 AASA-GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 S GY ++ A + I + V G+ F+ P+ + +LGV+ + K + Sbjct: 215 GNSTLGYYLASAFDEIYIQPSGDVNINGLAFELPFAREAFTRLGVTPRYFARYEYKNAIN 274 Query: 166 PFSEVNPKA--VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 ++E + A + + +S + VR ++E R + D L D EA + L Sbjct: 275 SYTEQDFTAPHREATEGFTNSLFGQIVRGIAEDRGLTEDVVRGLIDKAPLMAQEAMEAKL 334 Query: 224 IDVVGGQEEVWQSL 237 + + ++EV L Sbjct: 335 VTGLRYRDEVLGGL 348 >gi|332306361|ref|YP_004434212.1| signal peptide peptidase SppA, 67K type [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173690|gb|AEE22944.1| signal peptide peptidase SppA, 67K type [Glaciecola agarilytica 4H-3-7+YE-5] Length = 619 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 15/211 (7%) Query: 30 HVEDNSPHVARIAIRGQI-----------EDSQELIERIERISRDDSATALIVSLSSPGG 78 H++ N V + +G I DS + R R+ DDS ++++ + SPGG Sbjct: 323 HLDTNVDKVGVVVAKGTILNGDQKPGTVGGDSTANLLRKARL--DDSIKSVVLYVDSPGG 380 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SA+A E I + I+ +K KPV+ + AAS GY IS +++ I AA +++ GSIG+ Sbjct: 381 SAFASEIIRQEIENLKAAGKPVVALMSTYAASGGYWISASADEIWAAPSTITGSIGIFGM 440 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + LD LGV V ++ A ++PK Q++Q ++ Y F+ LV++ R Sbjct: 441 FVSFENTLDYLGVHTDGVGTTDF-AGMGITRGIDPKMGQVLQRSIEHGYDQFISLVADER 499 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + ++ GR+W G A + L+D +G Sbjct: 500 HMSKEDVDSIAQGRVWIGETALSLNLVDHLG 530 >gi|294789451|ref|ZP_06754688.1| signal peptide peptidase SppA, 36K type [Simonsiella muelleri ATCC 29453] gi|294482664|gb|EFG30354.1| signal peptide peptidase SppA, 36K type [Simonsiella muelleri ATCC 29453] Length = 335 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 29/268 (10%) Query: 37 HVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 H A I + G I +++ L + +E ++ A A+I+ +SPGGS F+ + Sbjct: 84 HTAVINLTGVIGGNEDVNHVEILRDGLEEAFKNKHAKAIIIHANSPGGSPVVSNVAFQEV 143 Query: 91 QKVKN---RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++KN KPV + +M AS Y I+ A++ I A +SLVGSIGV+ +DK Sbjct: 144 MRLKNMEKTKPVYVVIGDMCASGCYYIASAADKIYADPSSLVGSIGVIGSSFDATGLMDK 203 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTL 205 LGV + + K PFS P+ V + Q +++ + F++ V R + + Sbjct: 204 LGVKRRQRIAGNNKGMGDPFSPETPEQVAIWQQMLNQIHAEFIKAVKLGRGNKLKEQQNP 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD-QSIRKIKDWNPPKNYWFCDLK 264 L GR++TG E+K VGLID G ++Y++ D K+ D+ P +N Sbjct: 264 DLFSGRVYTGLESKNVGLIDEFG-------NVYSVARDVVKAPKLVDYTPEQN------- 309 Query: 265 NLSISSLLEDTIPLMKQTKVQG-LWAVW 291 ++SL+ + TK++ L +VW Sbjct: 310 --DLASLISRGLGAKMNTKLESWLNSVW 335 >gi|293390212|ref|ZP_06634546.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950746|gb|EFE00865.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D7S-1] Length = 626 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 D +A + + G I D + + I + R + DD A+++ ++SPGGSA+A Sbjct: 323 DTKNKIAVVNVEGAIIDGETDEENVGGDTIANLLRKAYDDKDVKAVVLRVNSPGGSAFAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P + Sbjct: 383 EIIRQELSHLQQAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTFE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GVS VK+S + A S FS ++ + ++Q ++ Y F+ VS+ R++ Sbjct: 443 KTIKKIGVSADGVKTSDL-ALGSAFSPLSSELNDVLQLEIEHGYDEFLTKVSQGRHLSKA 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G++W G+EA + L+D +G Sbjct: 502 QVDKIAQGQVWLGSEAIEHKLLDELG 527 >gi|260494226|ref|ZP_05814357.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] gi|260198372|gb|EEW95888.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] Length = 589 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E +E++ +D A+++ ++SPGGSA + I I+++ + KPV + +AAS G Sbjct: 343 ETLEKLNIAKENDKIKAVVLRINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGG 402 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I ++ GSIGV+ P + GV+I+ + + E S + Sbjct: 403 YYISANADKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKIS----EGEYSDLYSSD 458 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +S+ Y F+ +VS++R I +K +++GRIWTG EA K+GL D +G Sbjct: 459 TFTEKKYNKIYNSNLKVYDDFLNVVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIG 518 Query: 229 GQEEVWQSLYALGVDQSI 246 G E ++Y + D + Sbjct: 519 GLNE---AIYGIAEDNDM 533 >gi|242239399|ref|YP_002987580.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech703] gi|242131456|gb|ACS85758.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech703] Length = 617 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 26/246 (10%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 +S +A I G I D E ++I D A+++ ++SPGGS A E Sbjct: 323 DSNEIAVIFANGTIVDGPETPGFVGGDTTADQIREARLDPKIKAVVLRVNSPGGSVSASE 382 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + V+ KPV+ + MAAS GY IS ++ I+A+ ++L GSIG+ + Sbjct: 383 LIRAELAAVRQAGKPVVVSMGGMAASGGYWISTPASAIIASPSTLTGSIGIFGVLTTFEN 442 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD +GV V +SP+ A+ + + + Q+MQ ++ Y FV LV++SR + Sbjct: 443 SLDSVGVHTDGVATSPL-ADLAETKGLPSETAQLMQINIERGYKTFVSLVAQSRKKTPED 501 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---WF 260 ++ G +W G++AK GL+D +G D +++K D ++Y WF Sbjct: 502 VDAIAQGHVWIGSDAKANGLVDQLG------------DFDDAVKKAADLAGLEHYQLSWF 549 Query: 261 CDLKNL 266 + +L Sbjct: 550 TENADL 555 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 15/219 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I + D++ T +++ LS G+ + I +A+++ ++ I + + A Sbjct: 98 DIVDTIRQAKDDNNITGMVMDLSDFSGADQPSLQYIGKALREFRDAGKPIFAIGDNFTQA 157 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I V G Y K LDKL VS + K+ PF Sbjct: 158 QYYLASFANKIYLTPQGNVDLHGFATNNLYYKTLLDKLKVSTHIFRVGTYKSAVEPFIRD 217 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-----RIWTGAEAK---K 220 +++P A + V + ++ V+ +R I + +DG R G A+ + Sbjct: 218 DMSPAAREADSRWVSLLWQNYLNTVAANRQITAQQLFPGADGLLKNLRAVEGDTARYALE 277 Query: 221 VGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNY 258 L+D V + + QSL A G D K K++N Y Sbjct: 278 NKLVDEVATRPAIEQSLVKAFGWDA---KNKNFNATSIY 313 >gi|15646044|ref|NP_208226.1| protease IV (PspA) [Helicobacter pylori 26695] gi|2314611|gb|AAD08477.1| protease IV (PspA) [Helicobacter pylori 26695] Length = 292 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ +A K+ LID + Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKI 239 >gi|323345102|ref|ZP_08085326.1| signal peptide peptidase SppA [Prevotella oralis ATCC 33269] gi|323094372|gb|EFZ36949.1| signal peptide peptidase SppA [Prevotella oralis ATCC 33269] Length = 589 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 5/209 (2%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VYF+ + V++ + + + QI S + + +E++ DD A+++ ++S GG AYA Sbjct: 304 VYFAQGTIVQNAAAGL--FSQSAQIV-STTVCKDLEQLMNDDDVKAVVIRVNSGGGDAYA 360 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-YV 141 E I+ + K+K +KPV+ + + AAS Y +SC ++ IVA T+L GSIG+ P Y Sbjct: 361 SEQIWHQVAKLKTKKPVVISMGDYAASGAYYMSCVADWIVAQPTTLTGSIGIFGVIPDYS 420 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSE-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 KLGV VK++ + + +N + + V+ Y F + V++ R + Sbjct: 421 GLVTQKLGVKFDEVKTNKNSGFGNILARPLNADEIGYLTAYVNRGYQLFRKRVADGRRMS 480 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ G +W G +A L+D +GG Sbjct: 481 VPQVEKIAQGHVWLGQDALINRLVDQLGG 509 >gi|253688357|ref|YP_003017547.1| signal peptide peptidase SppA, 67K type [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754935|gb|ACT13011.1| signal peptide peptidase SppA, 67K type [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 616 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D E +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFEN 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ A+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPL-ADLSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G++AK+ GL+D +G Sbjct: 501 IDQIAQGHVWVGSDAKENGLVDQIG 525 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 28/223 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I + DD+ T +++ LS G + + I +A+++ ++ I V + + Sbjct: 97 DIVDSIRQAKSDDNITGMVLDLSDFTGADQPSLQYIGKALREFRDSGKPIYAVGDSYNQS 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N + V G Y K LDKL V+ + K+ P+ Sbjct: 157 QYYLASFANTVSLTPQGSVDLHGFATNNLYFKSMLDKLKVTTNIFRVGTYKSAVEPYLRD 216 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A +++ + ++ VS +R I + +++ GA GL V G Sbjct: 217 DMSPAARDADGRWINALWQQYLNTVSANRQI--------TPQQLFPGAAGIIAGLQSVQG 268 Query: 229 GQEEVWQSLYALG------------VDQSIRKIKDWNPPKNYW 259 YAL +QS+ K WN KN + Sbjct: 269 DTAR-----YALDNKLVDEVASRSMTEQSLVKAFGWNSQKNNF 306 >gi|328949857|ref|YP_004367192.1| signal peptide peptidase SppA, 36K type [Marinithermus hydrothermalis DSM 14884] gi|328450181|gb|AEB11082.1| signal peptide peptidase SppA, 36K type [Marinithermus hydrothermalis DSM 14884] Length = 544 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 1/192 (0%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIV-SLSSPGGSAYAGEAIFRAIQKVKNRKPV 99 + I G + E + R R++ D TA IV + SPGGSA A + I R + ++K KPV Sbjct: 292 LPILGGDQAGSESLLRALRLAEADPKTAAIVLYVDSPGGSALASDLILREVARIKKTKPV 351 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + +AAS GY ++C + IVAA T+L GSIGV+ + ++ F + G++ +++ Sbjct: 352 VAVLGPVAASGGYYVACQATRIVAAPTTLTGSIGVVTLFGILEEFNHRYGLNPEAITLGR 411 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 + + ++Q ++ Y FV V E R + + + GR+W G +A Sbjct: 412 FAELGTSRRAPTEEERALIQRYIEEVYARFVARVVEGRGLEPARVDEIGRGRVWAGQDAL 471 Query: 220 KVGLIDVVGGQE 231 ++GL+D +G E Sbjct: 472 ELGLVDELGDVE 483 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA----------LIVSLSSPGGSA 80 +E P+ AR G+I +E E +E+++ A A I L +P G+ Sbjct: 34 LEIGGPYPARRPT-GRIWGFEERAETLEQLTEKLQALAQAPWVEGVVLRIEGLRAPYGTV 92 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIV--AAETSLVGSIGVLFQ 137 +A + A+Q++++ K + + + S+ YL S A I V +AE SL +G+ Sbjct: 93 FA---LREAVQRLRDAGKQTLAYLTRVDFSSYYLASAAQTIAVPESAEFSL---LGLKLS 146 Query: 138 YPYVKPFLDKLGV-----SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 +VK FLD+ G+ +I+ KS+ S SE N + +++ + F + Sbjct: 147 VTFVKDFLDRYGIRFEKQAIREYKSAGDNLVHSRMSEAN---REQYTTLLERFFEVFAQA 203 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E+R + D I + EA+ GL+D V ++E+ Q + Q R + Sbjct: 204 VAEARGVDPQTVRDWIDAGITSAKEAQARGLVDRVAYEDELIQKHH-----QPYRAAARF 258 Query: 253 NPPKNYWFC 261 PPK F Sbjct: 259 LPPKLRVFS 267 >gi|256027690|ref|ZP_05441524.1| protease IV [Fusobacterium sp. D11] Length = 589 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E +E++ +D A+++ ++SPGGSA + I I+++ + KPV + +AAS G Sbjct: 343 ETLEKLNIAKENDKIKAVVLRINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGG 402 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I ++ GSIGV+ P + GV+I+ + + E S + Sbjct: 403 YYISANADKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKIS----EGEYSDLYSSD 458 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +S+ Y F+ +VS++R I +K +++GRIWTG EA K+GL D +G Sbjct: 459 TFTEKKYNKIYNSNLKVYDDFLNVVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIG 518 Query: 229 GQEEVWQSLYALGVDQSI 246 G E ++Y + D + Sbjct: 519 GLNE---AIYGIAEDNDM 533 >gi|260435894|ref|ZP_05789864.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. WH 8109] gi|260413768|gb|EEX07064.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. WH 8109] Length = 275 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ + I A+ +++ + V+ ++AS G I A+ IVA Sbjct: 49 ALLLRIDSPGGTVGDSQEIHAALLRLREQGCRVVASFGNISASGGVYIGVAAEKIVANPG 108 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ + + +K+G+ +VKS P K SP ++ ++Q+++DSSY Sbjct: 109 TITGSIGVILRGNDLSRVFEKIGIRFDTVKSGPFKDILSPDRPLSDAERALLQELIDSSY 168 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 FV +V+ RN+ + +DGR+++G +A+ +GL+D +G ++ Sbjct: 169 GQFVGVVARGRNLELETVKCFADGRVFSGEQAQALGLVDELGDEDH 214 >gi|108563786|ref|YP_628102.1| signal peptide protease IV [Helicobacter pylori HPAG1] gi|107837559|gb|ABF85428.1| signal peptide protease IV [Helicobacter pylori HPAG1] Length = 292 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 126/241 (52%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I + + + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSTDDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|149920043|ref|ZP_01908517.1| signal peptide peptidase SppA, 36K type [Plesiocystis pacifica SIR-1] gi|149819140|gb|EDM78576.1| signal peptide peptidase SppA, 36K type [Plesiocystis pacifica SIR-1] Length = 884 Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 15/211 (7%) Query: 37 HVARIAIRGQIED---------------SQELIERIERISRDDSATALIVSLSSPGGSAY 81 HVA + I G I+D + L + I + D A++V + SPGGS Sbjct: 569 HVAVLHIDGTIDDGISLHVPILDIDVSGAASLTKTIAALRDDPDVRAIVVRVDSPGGSVK 628 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I A+ + KPV+ + AAS GY ++ A I A T+L GSIG+ + Sbjct: 629 GAQDIAHALDLAREVKPVVISMGNQAASGGYWVATAGQYIYADATTLTGSIGIFYPKFDF 688 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FLD+ GV + SV A S + + + + +SY F+ V+E+R + Sbjct: 689 SEFLDRYGVGVDSVAIGDRAAMRSMWLANSDADREAAMRGIRASYDRFIVRVAEARAMTP 748 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ ++ GR+W+G A +VGL+D GG E Sbjct: 749 EQADAVARGRVWSGVRALEVGLVDRYGGLYE 779 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 9/203 (4%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI++ G+ +D E++ + ++R L+ S G A E + A+ + + Sbjct: 338 QVTRISLAGKSDDRDLAEVVWTFDGLARRGPGVILLEVDGSDFGLAQL-EEVREAVLRYR 396 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + E A++ Y ++ + + I A + GVL Y L +LGV + Sbjct: 397 AQGGKVVAYLEGASTFEYFLAASCDRIYAHPQQGLELRGVLRNTFYFGELLGRLGVRAEF 456 Query: 155 VKSSPMKAEPSPFSEVNPKA--VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--DG 210 V+ + K P S P A + + V +++ VRL+ SR D +V D Sbjct: 457 VRVAEYKGTPERASRGEPSAPVARANRAYVTDTWNHVVRLIGHSR--ARDPAVVSEWIDR 514 Query: 211 RIWTGAEAKKVGLIDVVGGQEEV 233 +WT +A+++GLI+ + EE+ Sbjct: 515 AVWTPEDARRMGLIEGLAWPEEL 537 >gi|78212133|ref|YP_380912.1| signal peptide peptidase A [Synechococcus sp. CC9605] gi|78196592|gb|ABB34357.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. CC9605] Length = 273 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 96/166 (57%), Gaps = 1/166 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ + I A+ +++ + V+ ++AS G I A+ IVA Sbjct: 47 ALLLRIDSPGGTVGDSQEIHAALLRLREQGCRVVASFGNISASGGVYIGVAAEKIVANPG 106 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ + + +K+G+ +VKS P K SP ++ ++Q+++DSSY Sbjct: 107 TITGSIGVILRGNDLSRVFEKIGIRFDTVKSGPFKDILSPDRPLSDAERALLQELIDSSY 166 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 FV +V++ RN+ + +DGR+++G +A+ +GL+D +G ++ Sbjct: 167 GQFVGVVAQGRNLELETVKRFADGRVFSGEQAQALGLVDELGDEDH 212 >gi|309796456|ref|ZP_07690864.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308119961|gb|EFO57223.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 325 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W S + +PH A I IRG+I D+ LI I+ + ++ A+++ ++SPGGS Sbjct: 68 WQS-AKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAVVLRINSPGGSPV 126 Query: 82 AGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ +A + + K V + ++ AS GY I+ A++ I A SLVGSIGV+ Sbjct: 127 QAGRIYEEVKAQRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG 186 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +D+LG+ +++ S KA PFS + + + V+ ++ F+ V R Sbjct: 187 FGFTGLMDRLGIERRAITSGEHKALLDPFSPLTSDMKKFWEGVLSKTHQQFIERVKAGRG 246 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + G +W G +AK++GLID +G Sbjct: 247 DRLKDAPEVFSGLLWNGEQAKEIGLIDGLG 276 >gi|254491611|ref|ZP_05104790.1| peptidase, S49 (protease IV) family [Methylophaga thiooxidans DMS010] gi|224463089|gb|EEF79359.1| peptidase, S49 (protease IV) family [Methylophaga thiooxydans DMS010] Length = 327 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 14/255 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSA 66 +++L LV ++ F + H A I I G I E ++ I ++A Sbjct: 54 FILLYLVAFLILSFKPAGLKTVTDAHTALIDINGVIAADAEANADAVVTGIREAFDSETA 113 Query: 67 TALIVSLSSPGGSAYAGEAI---FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 LI+ L++PGGS I R +QK K PV V ++ AS GY I+ A++ I A Sbjct: 114 KGLILRLNTPGGSPVQAGIINDEIRRLQKEKPDFPVYAVVQDVCASGGYYIAVAADEIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S+VGSIGV ++K+GV +S+ + KA PF + V D++D Sbjct: 174 DKASIVGSIGVRMDSFGFTEAIEKIGVERRSLTAGENKAFLDPFLPMKAADVDHAHDMLD 233 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + + F+ +V E R L G W+G +A ++GLID + +V + L +G + Sbjct: 234 NIHQQFITVVKEGRGERLKDNDELFSGLFWSGEQALELGLIDGLASSSKVAREL--IGAE 291 Query: 244 QSIRKIKDWNPPKNY 258 I D+ P NY Sbjct: 292 DII----DYTPRPNY 302 >gi|289765650|ref|ZP_06525028.1| protease IV [Fusobacterium sp. D11] gi|289717205|gb|EFD81217.1| protease IV [Fusobacterium sp. D11] Length = 578 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E +E++ +D A+++ ++SPGGSA + I I+++ + KPV + +AAS G Sbjct: 332 ETLEKLNIAKENDKIKAVVLRINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGG 391 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I ++ GSIGV+ P + GV+I+ + + E S + Sbjct: 392 YYISANADKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKIS----EGEYSDLYSSD 447 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +S+ Y F+ +VS++R I +K +++GRIWTG EA K+GL D +G Sbjct: 448 TFTEKKYNKIYNSNLKVYDDFLNVVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIG 507 Query: 229 GQEEVWQSLYALGVDQSI 246 G E ++Y + D + Sbjct: 508 GLNE---AIYGIAEDNDM 522 >gi|237752037|ref|ZP_04582517.1| protease IV [Helicobacter winghamensis ATCC BAA-430] gi|229376604|gb|EEO26695.1| protease IV [Helicobacter winghamensis ATCC BAA-430] Length = 293 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 118/228 (51%), Gaps = 4/228 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +EFV K +K ++ L+ + +++ S V +++ +VARI + G I S ++ +E + Sbjct: 11 LEFVGKHLKA---LIFLLVVVLIFMSKQEKVLEDA-NVARIDLYGAILQSDTFLQELESL 66 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 ++ +++ + SPGG+ I AI++V + PV+ AS YL ++ Sbjct: 67 EKNPHLKGILLVIDSPGGAIAPSVEISEAIKRVNFKIPVVAYAQGAMASGSYLAGVWADS 126 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +++GSIGV+ + K+G++ +++K+ K +P N + +M++D Sbjct: 127 IVANRGAMLGSIGVIINGMDLSELAKKVGIAPQTIKAGIYKEAGTPMRSWNKEEERMLKD 186 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +V Y FV V +R + + + GRI + A ++GL+D VG Sbjct: 187 LVQEQYWMFVEEVVNARKLDIAQEPNFAQGRILSAKNAFELGLVDKVG 234 >gi|167032494|ref|YP_001667725.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida GB-1] gi|166858982|gb|ABY97389.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida GB-1] Length = 329 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 119/236 (50%), Gaps = 12/236 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + ++ L ++ H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILVLFTPLMDMDKAASRSASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P I + ++ AS Y I+ Sbjct: 103 DAFKDSKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVISDLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A++ I A + SLVGSIGV Y +V ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGT-MEKLGVERRAYTSGEHKAFLDPFSPEKPEE 221 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + Q V+D++++ F+ +V + R + + L G +W+G +AK +GL+D +G Sbjct: 222 TRFWQGVLDTTHNQFIAMVKQGRGERLKDKEHPELFSGLVWSGEQAKALGLVDGLG 277 >gi|91789506|ref|YP_550458.1| peptidase S49 [Polaromonas sp. JS666] gi|91698731|gb|ABE45560.1| peptidase S49 [Polaromonas sp. JS666] Length = 361 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 11/208 (5%) Query: 35 SPHVARIAIRGQI----EDSQELIERIERIS-RDDSATALIVSLSSPGGS----AYAGEA 85 +PH A + I+G+I + S E + R + DD A A+++ ++SPGGS + Sbjct: 110 APHTAVVEIKGEIAAGADASAEFVNAALRAAFEDDGAKAVVLLINSPGGSPVQAGMMNDE 169 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I R K+K++KPV V E ASA Y I+ A++ I + S+VGSIGVL + Sbjct: 170 ILRL--KIKHKKPVYAVVEESCASAAYYIAVAADKIYVDKASIVGSIGVLMDGFGFTGLM 227 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DKLGV + + + K PFS + K Q ++D + F+ +V R + Sbjct: 228 DKLGVERRLLTAGENKGFLDPFSPQSDKQRVYAQAMLDQIHQQFITVVKAGRGKRLKEMP 287 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + G W+G +A ++GL D +GG E V Sbjct: 288 EMFSGLFWSGQQAVELGLADQLGGLEYV 315 >gi|223041110|ref|ZP_03611365.1| signal peptide peptidase SppA, 36K type [Campylobacter rectus RM3267] gi|222877604|gb|EEF12730.1| signal peptide peptidase SppA, 36K type [Campylobacter rectus RM3267] Length = 288 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 109/197 (55%), Gaps = 6/197 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N P++A+I + G I D+ + +E I+ S+D++ +++ + SPGG+ ++ A++ + Sbjct: 44 NPPNLAQINLTGAIIDAHKALEEIDSASKDEAIKGVLLYIDSPGGALAPSVELYTAVKNL 103 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + +KPVI AS Y +++ I+A + +GSIGV+ Q + K+GVS + Sbjct: 104 RAKKPVIAYAGGSMASGSYYAGVSADKILANPGAFIGSIGVIMQGADLSELAAKIGVSQQ 163 Query: 154 SVKSSPMKAEPS---PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 VK+ K + P+SEV + +Q +V++SY FV V+ +R + K ++ Sbjct: 164 IVKAGEYKEAGTFLRPWSEVEKR---QLQSLVNASYAMFVSDVATARKLDVTKRDEWANA 220 Query: 211 RIWTGAEAKKVGLIDVV 227 R++ +A K+GLID V Sbjct: 221 RVFLARDAAKLGLIDEV 237 >gi|254513823|ref|ZP_05125884.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR5-3] gi|219676066|gb|EED32431.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR5-3] Length = 587 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 8/228 (3%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ +++ GGS +A E I I +++ PV+ + +AAS GY I+ A++ I+A T Sbjct: 339 AIVLRVNTGGGSVFASEIIRAEIARIRQAGTPVVVSMGSVAASGGYYIATAADRIIATPT 398 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV +P V+ L K G+ V ++ + P ++P ++Q VD Y Sbjct: 399 TITGSIGVFAAFPTVERLLAKGGIHTDGVGTTGLAGGLRPDRALDPAVSDVLQQSVDDLY 458 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQS 245 F++LVS+ R+I + ++ GR+ + +A + GL+D +G + Q L G Q Sbjct: 459 AQFLQLVSQGRSIDMETLDSIAQGRVLSARDALEAGLVDGLGSLDYAVQEAATLAGFSQD 518 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + P + L+ LS + + + + V GL +W P Sbjct: 519 DYNVISIMPEFSSRDLLLQQLS------ERMGVSRLLAVPGLALLWGP 560 >gi|313618717|gb|EFR90640.1| putative signal peptide peptidase SppA [Listeria innocua FSL S4-378] Length = 206 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 3/146 (2%) Query: 94 KNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVS 151 K RK P + MAAS GY IS ++ I A++ +L GS+GV+ Q Y Y + + KLGVS Sbjct: 3 KERKIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVIMQGYDYSE-LMKKLGVS 61 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 ++KS K S + ++MQ ++D SY+ FV++V+ R + ++ ++DGR Sbjct: 62 DNTIKSGAYKDIMSGTRPMTDDEKKIMQSMIDDSYNEFVKVVATGRGMSEEQVRKIADGR 121 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 I+ G +AK+ GLID G QE+ ++L Sbjct: 122 IYDGRQAKENGLIDAFGYQEDALEAL 147 >gi|148359293|ref|YP_001250500.1| signal peptide peptidase [Legionella pneumophila str. Corby] gi|296107340|ref|YP_003619040.1| signal peptide peptidase [Legionella pneumophila 2300/99 Alcoy] gi|148281066|gb|ABQ55154.1| signal peptide peptidase [Legionella pneumophila str. Corby] gi|295649241|gb|ADG25088.1| signal peptide peptidase [Legionella pneumophila 2300/99 Alcoy] gi|307610447|emb|CBX00018.1| hypothetical protein LPW_17741 [Legionella pneumophila 130b] Length = 318 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 25/290 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ + +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRAIILVVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASA 110 + IE+ + ALIV ++SPGGS E I+ +Q K+ KP I +M ASA Sbjct: 90 TKGIEKAYKSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ ++ I A+ S+VGSIGVL+ + +V L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDA-LQKLGISRRLQTSGVNKAFLDPFSP 208 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 209 TTEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALANGLIDGYAS 268 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 ++ + + I I D+ +N + KNL + + D +P++ Sbjct: 269 SGQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVI 310 >gi|225619707|ref|YP_002720964.1| periplasmic serine protease SppA [Brachyspira hyodysenteriae WA1] gi|225214526|gb|ACN83260.1| SppA, Periplasmic serine proteases (ClpP class) [Brachyspira hyodysenteriae WA1] Length = 268 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 10/223 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMA 107 +++LI E + A+++ + SPGGS + E + ++ +K + KP++ MA Sbjct: 9 TEKLISDFEYYFKHPKVKAIVLQVDSPGGSLTSCEEALKYLKDLKKKYPKPIVASFRSMA 68 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS ++ I A E++L GSIGV+ Q+ V +DK G+ + ++KS K SPF Sbjct: 69 ASGGYYISMIADKIYANESTLTGSIGVISQFFNVSELMDKYGIKMYTIKSGRNKDSLSPF 128 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLID 225 E + QD+ D F +V +SR I ++ + DGR+++G +A +VGLID Sbjct: 129 REPREDELAYWQDMTDEFVGQFTNVVEQSRGDKIKGNREDIF-DGRVFSGKKALEVGLID 187 Query: 226 VVGGQEEVWQSLYALGVDQS-----IRKIKDWNPPKNYWFCDL 263 +G + + +G + I+K K+ N N F ++ Sbjct: 188 SIGTLNDAVKDAAEMGGIEDEEPYIIKKPKEKNDVFNLLFANI 230 >gi|221134873|ref|ZP_03561176.1| signal peptide peptidase SppA, 67K type [Glaciecola sp. HTCC2999] Length = 544 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 122/219 (55%), Gaps = 8/219 (3%) Query: 56 RIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 R+ R +R DD+ A+++ + SPGGSA+A E I + ++++++ KPV+ + AAS GY Sbjct: 282 RLLRKARLDDNVKAVVMHVDSPGGSAFASEIIRQEVEELRHAGKPVVALMGTYAASGGYW 341 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I+A+ +++ GSIG+ + L LGV V+++ + ++ P Sbjct: 342 ISASADKIIASPSTITGSIGIFGMLMTYEESLAYLGVYSDGVQTTEFGF--NSLAKTLPD 399 Query: 174 AV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ ++Q ++ Y F+ LV+E+RN+ ++ ++ GR+W G A ++GL+D +G E Sbjct: 400 SLGNLIQRNIERGYEKFITLVAENRNMTLEQVDSIAQGRVWIGTTALELGLVDELGTLNE 459 Query: 233 VWQSLYALG--VDQSIRKIKDWNPPKNYWFCD-LKNLSI 268 S L D + I+ PK + + L+N S+ Sbjct: 460 ALSSAAELAELTDYEVTYIERTLSPKEQFIQELLRNASV 498 >gi|238754912|ref|ZP_04616262.1| Protease 4 [Yersinia ruckeri ATCC 29473] gi|238706923|gb|EEP99290.1| Protease 4 [Yersinia ruckeri ATCC 29473] Length = 616 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 17/204 (8%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ ++SPGGS A E I + ++ KP++ + MAAS GY +S +N I+A+ + Sbjct: 365 AVVLRVNSPGGSVSASELIRSELVALRAANKPLVVSMGGMAASGGYWVSTPANYIIASPS 424 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LGV V +SP+ A+ S + P+ Q+MQ +++ Y Sbjct: 425 TLTGSIGIFGVINTYQDSLETLGVHTDGVATSPL-ADVSVTKNLPPEFSQIMQISIENGY 483 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV LV+ SR+ ++ ++ G +W G +AK GL+D +G D ++ Sbjct: 484 KNFVDLVATSRHKTPEQVDEIAQGHVWLGLDAKNNGLVDQLG------------DFDDAV 531 Query: 247 RKIKDWNPPKNY---WFCDLKNLS 267 +K + K Y WF D N + Sbjct: 532 KKAAELAKLKTYQINWFVDQPNFA 555 >gi|118616594|ref|YP_904926.1| protease IV, Ssp [Mycobacterium ulcerans Agy99] gi|118568704|gb|ABL03455.1| protease iv, Ssp [Mycobacterium ulcerans Agy99] Length = 600 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 9/172 (5%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 DD +A+++ + SPGGS A E I+R +Q+ ++R K V+ + +AAS GY +S ++ I Sbjct: 350 DDEVSAIVLRVDSPGGSVTASETIWREVQRARDRGKSVVASMGSIAASGGYYVSMGADAI 409 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP----SPFSEVNPKAVQM 177 VA ++ GSIGV+ V+ D+LGV ++++++ A+ +PF++ + Sbjct: 410 VANPGTITGSIGVITGKLVVRDLKDRLGVGSETLRTN-ANADAWSIDAPFTDEQRARREA 468 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D+ Y F V+ RN+ + ++ GR+WTGA+A + GL+D +GG Sbjct: 469 EADMF---YTDFAERVARGRNLRTEDVDAVARGRVWTGADALERGLVDELGG 517 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + + R + D LI + P A +A+ AI KP + + Sbjct: 69 RDAVAALHRGAEDPRVGGLIARVQLPPAPIGAVQALREAIAAFSAVKPSVAWAETYPGTL 128 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A I + G IG ++ LDK+G+ + V K+ F+E Sbjct: 129 SYYLATAFREIWMQPSGEAGLIGFASNAMFLCDALDKVGIEAQFVARGEYKSAADLFTED 188 Query: 170 ----VNPKAV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 N +AV +M++ + D ++H V++SR I L+D EA GLI Sbjct: 189 GYTDANREAVTRMLESLQDQAWH----AVAQSRQIDAGVLDELADKAPLLRDEALSSGLI 244 Query: 225 DVVGGQEEVWQSLYAL 240 D +G ++E + + L Sbjct: 245 DRIGFRDEAYARIAEL 260 >gi|237738354|ref|ZP_04568835.1| protease IV [Fusobacterium mortiferum ATCC 9817] gi|229420234|gb|EEO35281.1| protease IV [Fusobacterium mortiferum ATCC 9817] Length = 572 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 102/197 (51%), Gaps = 3/197 (1%) Query: 44 RGQIEDS---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 RG I +S +++ I++ ++ + +++ L+SPGGSA A I +Q+ KP+ Sbjct: 318 RGGIGNSITPEKINSEIDKALKNPNIKGIVLRLNSPGGSALASNLIHHKLQEANKIKPIY 377 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + +AAS GY ++ A I A S+ GSIGV+ P + K+ V+++SVK Sbjct: 378 VSIGGVAASGGYYMASAGQKIFADNESITGSIGVVSLIPNFNELMKKIDVNVESVKKGEY 437 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 S + N K + + Y+ F+ +V++ RN+ + ++ G++W G E K+ Sbjct: 438 SDLFSLTKDFNGKDREKIYASSVKVYNEFLDVVAQGRNLNREYVHSIAQGKVWLGEEGKE 497 Query: 221 VGLIDVVGGQEEVWQSL 237 + L+D +GG E SL Sbjct: 498 IDLVDEIGGIENAISSL 514 >gi|262039165|ref|ZP_06012485.1| signal peptide peptidase SppA, 67K type [Leptotrichia goodfellowii F0264] gi|261746781|gb|EEY34300.1| signal peptide peptidase SppA, 67K type [Leptotrichia goodfellowii F0264] Length = 595 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 102/185 (55%), Gaps = 2/185 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + E+++ +S+ +++ ++SPGGSA A E I++ + K+ PV + E+AAS GY Sbjct: 337 MAEKLKELSKIKDLKGVVLRVNSPGGSALASEMIYQMLSKI--NVPVYVSMSEVAASGGY 394 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS + + A + ++ GSIGV+ +P +K GV+ S+ PF ++ Sbjct: 395 YISMSGKKVFANDATITGSIGVVSMFPKFYNAQNKYGVTSNSISKGKYTDTFDPFVPLSA 454 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ + + ++++Y F VS++RN+ + G+IW G+EAKK+ L+D + +E Sbjct: 455 ESRNKIIESMNATYDEFKSRVSKNRNMAPQVLENYAQGKIWLGSEAKKINLVDGIATLDE 514 Query: 233 VWQSL 237 ++L Sbjct: 515 TVKTL 519 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/183 (18%), Positives = 84/183 (45%), Gaps = 7/183 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++ +E I +D+ +I++L S+ E I + +Q++KN+ + + Sbjct: 89 DVLNSLEDIKNNDNIKGVIINLDQTNISSVKSEEISKKLQEIKNKNKKVYAFGAYMDNNN 148 Query: 112 YLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ +N I+V + + V G + Y K L +GV ++ V+ K+ ++ Sbjct: 149 YPLASVANEIIMVPSASGSVSLAGYHYSDLYYKKLLSNVGVDMEVVRIGDFKSYGENYTS 208 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSDGRIWTGAEAKKVGLI 224 ++ + +++S ++ F+ VS++R + +K ++ D T + A+ + Sbjct: 209 DTMSSGLRNELTRILESRFNSFLDKVSKARRLDKNKLNADILNGDNTNLTPSAARDKNFV 268 Query: 225 DVV 227 D + Sbjct: 269 DTL 271 >gi|238897852|ref|YP_002923531.1| protease IV, a signal peptide peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465609|gb|ACQ67383.1| protease IV, a signal peptide peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 614 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 24/254 (9%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N +A I + G I D ++ I + + A+I+ ++SPGGS A E Sbjct: 325 NDHQIAVIFVNGMITDGLKTPNNVGGEDAAYEIRQARLNPKIKAVILRVNSPGGSVSASE 384 Query: 85 AIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + + +KP++ + + AS GY IS ++ I+A+ ++L GSIG+ + Sbjct: 385 LIRSELATLHEAKKPLVVSMGGLGASGGYWISTPADYIIASPSTLTGSIGIFGVINTFEN 444 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L +GVS V +SP+ ++ S ++P+ ++MQ V++ Y FV+LV+ +R+ + Sbjct: 445 SLKSIGVSTDGVSTSPL-SDISITKNLSPEFSKIMQMNVENGYKTFVKLVAAARHQDPKQ 503 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+WTG +AK GLID +G D ++ K + KNY Sbjct: 504 IDSIAQGRVWTGLDAKNNGLIDQLG------------DFDDAVEKAAELANLKNYQLYQF 551 Query: 264 KN-LSISSLLEDTI 276 + L+ +L D I Sbjct: 552 GDQLNFRDMLFDQI 565 >gi|330815967|ref|YP_004359672.1| Peptidase, U7 family protein [Burkholderia gladioli BSR3] gi|327368360|gb|AEA59716.1| Peptidase, U7 family protein [Burkholderia gladioli BSR3] Length = 338 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 120/241 (49%), Gaps = 10/241 (4%) Query: 7 KIKTRYV-MLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R++ ++ V L F +S + +S H A + I G+I +++++ ++ Sbjct: 54 RIAFRFLWLIVFVVLVFALFDFSGDGKLSSSRHTALVTIDGEIAAGTNANAEDINSALDD 113 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 114 AFEDSGTVGVVLRINSPGGSPVQAGIVYDEIRRLRKKYPSKPLYVVVSDMCASGGYYIAS 173 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLGV + S K PFS PK + Sbjct: 174 AADKIYVNQASIVGSIGVLMDGFGFTGLMDKLGVQRRLHTSGENKGFFDPFSPETPKMDE 233 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 234 HAQAMLDEIHAQFIQAVKDGRGKRLHESPEIFSGLFWTGAKSVELGLADGFGTTDTVARD 293 Query: 237 L 237 + Sbjct: 294 V 294 >gi|152996263|ref|YP_001341098.1| signal peptide peptidase SppA, 36K type [Marinomonas sp. MWYL1] gi|150837187|gb|ABR71163.1| signal peptide peptidase SppA, 36K type [Marinomonas sp. MWYL1] Length = 339 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 122/233 (52%), Gaps = 17/233 (7%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIE-----DSQELIERIE 58 +I R+ L++ V + S+ +D S VA I +RG I +S E + ++ Sbjct: 60 RIFFRFTTLAIFLAVVGGWFAKSNFQDVSLEGDIVAMIPMRGVIGADNEIESSEFVGLLD 119 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ-KVKNRK--PVITEVHEMAASAGYLIS 115 ++ +++ ++SPGGS I+ AI+ K +N PV+ V +MAAS GY I+ Sbjct: 120 AAYQNSRLKGVVIEMNSPGGSPVHSGIIYDAIRAKEQNYPDIPVLVVVEDMAASGGYYIA 179 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A+N I A + SLVGSIGV+ L+K+GV ++ + KA PF+ + +A Sbjct: 180 SAANEIYADKASLVGSIGVISSGFDASNLLEKIGVERRTFTAGRNKAFLDPFAPMTEEAK 239 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLID 225 Q V+D ++ F+ V E R D+ ++ D G ++TG++A K+GLID Sbjct: 240 VKWQAVLDETHQQFINAVKEGRG---DRLVITDDVFSGMVFTGSQAIKIGLID 289 >gi|294635913|ref|ZP_06714359.1| signal peptide peptidase SppA [Edwardsiella tarda ATCC 23685] gi|291090759|gb|EFE23320.1| signal peptide peptidase SppA [Edwardsiella tarda ATCC 23685] Length = 617 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 112/211 (53%), Gaps = 15/211 (7%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 +I + D + A+I+ ++SPGGS A E I + ++ KPV+ + +AAS GY Sbjct: 353 NQIRQARLDPAIRAIILRVNSPGGSVTASEEIRSELAAARSAGKPVVVSMGGLAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +N I+A+ T+L GSIG+ + L+KLGV V +S + + ++ P+ Sbjct: 413 ISTPANYIIASPTTLTGSIGIFGVINTFEKPLNKLGVYTDGVATSSLA--DTALTKALPQ 470 Query: 174 AV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QE 231 +V +MQ + + Y F+ LV+E+R+ ++ ++ GR+W G +AK GL+D +G + Sbjct: 471 SVSDLMQLTIANGYQRFINLVAEARHKTPEQVDQIAQGRVWLGIDAKANGLVDQLGDFDD 530 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 V ++ G+ Q P+ W+ D Sbjct: 531 AVAKAAQLAGIKQ----------PRLQWYVD 551 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 18/171 (10%) Query: 41 IAIRGQIEDSQELIERIE--RISRDDSA-TALIVSLSSPGGS-----AYAGEAI--FRAI 90 + +RG L + ++ R ++DD+ T L++SL++ G+ Y G+A+ FRA Sbjct: 84 LGMRGNTLQENSLFDLVDTLRQAKDDANITGLVLSLNNFVGADQPSLRYLGKALSEFRA- 142 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + KP+I V E + A Y ++ ++ I + V G+ Y K LDKL V Sbjct: 143 ----SGKPIIA-VGESYSQAQYFLASYADKIYLSPQGSVALQGMATNNLYYKSLLDKLDV 197 Query: 151 SIKSVKSSPMKA--EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 S + K+ EP +++P+A ++ + ++ V+ +R++ Sbjct: 198 STHIFRVGTYKSAVEPLMRDQMSPQARSADSQWLNGMWDNYLTTVAANRHL 248 >gi|325275823|ref|ZP_08141688.1| signal peptide peptidase SppA, 36K type [Pseudomonas sp. TJI-51] gi|324099042|gb|EGB97023.1| signal peptide peptidase SppA, 36K type [Pseudomonas sp. TJI-51] Length = 329 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 110/206 (53%), Gaps = 12/206 (5%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + H A + +RG I D + +++ + +D A+++ ++SPGGS ++ Sbjct: 73 GASHTALVEVRGVIADQEAASADNIVKSLREAFKDSKTKAVVMRINSPGGSPVQAGYVYD 132 Query: 89 AIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPF 144 I++++ P I + ++ AS Y I+ A++ I A + SLVGSIGV Y +V Sbjct: 133 EIRRLRAEYPAIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTAAGYGFVGT- 191 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLGV ++ S KA PFS P+ + Q V+D++++ F+ +V + R + Sbjct: 192 MEKLGVERRAYTSGEHKAFLDPFSPEKPEETRFWQGVLDTTHNQFIAMVKQGRGERLKDK 251 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + L G +W+G +AK +GL+D +G Sbjct: 252 EHPELFSGLVWSGEQAKALGLVDGLG 277 >gi|307822687|ref|ZP_07652918.1| signal peptide peptidase SppA, 36K type [Methylobacter tundripaludum SV96] gi|307736291|gb|EFO07137.1| signal peptide peptidase SppA, 36K type [Methylobacter tundripaludum SV96] Length = 321 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 8/213 (3%) Query: 33 DNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 D+ H A I + G I + +E +IE + +D +I+ +SPGGS ++ Sbjct: 68 DSKDHTAVIDVVGMIAEGKEANADSIIESLRNAVKDKHTKGIILHANSPGGSPVQSSYVY 127 Query: 88 RAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+K+K P + V ++ AS Y I AS+ I +SLVGSIGVL Sbjct: 128 EEIRKIKKEHPELPIYAVVSDICASGCYFIVSASDKIFVNPSSLVGSIGVLMDGFGFVDG 187 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + KLGV + + KA PFS Q +Q +++ + F+ V R + Sbjct: 188 MQKLGVERRLFTAGAHKAMLDPFSPSKEDETQYIQSLLNQVHQQFIGAVKAGRGDRLKEN 247 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + G +WTG E K+G++D VG Q+ V + L Sbjct: 248 PDMFSGLVWTGEEGVKLGIVDGVGNQDYVAKEL 280 >gi|145517316|ref|XP_001444541.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411963|emb|CAK77144.1| unnamed protein product [Paramecium tetraurelia] Length = 239 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 9/209 (4%) Query: 36 PHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ-- 91 P + I + G I+ ++ +++++I + + AL V ++SPGG + I + + Sbjct: 11 PRIPIIRLSGVIKQKSGDKIQDQLDKI-KSKNLCALAVLINSPGGLPVQSDIICQKLNLF 69 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K K+ P+ T ++AAS GY + C + + A ++SLVGS+GV+ Q+ +K L+KLG+ Sbjct: 70 KQKHNIPIYTFAEDVAASGGYFVLCIGDKVFADQSSLVGSVGVISQWHGIKKALEKLGIE 129 Query: 152 IKSVKSSPMKAE--PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 K + S+ E S FSE NP+ D ++ ++ F+ V R D+ + ++ Sbjct: 130 AKFLSSNDQIHEVVNSAFSEFNPQGATQWVDKLEYTHQMFIDHVKSYRKNIVDQNVFKAE 189 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ G +AK++GLID G EEV L+ Sbjct: 190 --VYNGEQAKQLGLIDDFGNYEEVLNKLH 216 >gi|238919550|ref|YP_002933065.1| signal peptide peptidase SppA, 67K type, [Edwardsiella ictaluri 93-146] gi|238869119|gb|ACR68830.1| signal peptide peptidase SppA, 67K type, putative [Edwardsiella ictaluri 93-146] Length = 617 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 15/215 (6%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLI 114 +I + D + A+I+ ++SPGGS A E I A+ ++ KPV+ + +AAS GY I Sbjct: 354 QIRQARLDPAIRAIILRVNSPGGSVTASEEIRSALAAARDAGKPVVVSMGGLAASGGYWI 413 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S +N IVA+ ++L GSIG+ + L LGV V +SP+ + ++ P++ Sbjct: 414 STPANTIVASPSTLTGSIGIFGVINTFEKPLGLLGVYTDGVATSPLA--DTALTKALPQS 471 Query: 175 V-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEE 232 V +MQ +++ Y F+ LV+ +R+ + ++ GR+W G +AK GL+D +G + Sbjct: 472 VSDLMQLTIENGYQRFISLVATARHKTPAQIDNIAQGRVWLGVDAKANGLVDRLGDFDDA 531 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 V Q+ G+ Q P+ W+ D + S Sbjct: 532 VSQAATLAGIKQ----------PQLQWYVDNPSFS 556 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 15/157 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGS-----AYAGEAI--FRAIQKVKNRKPVITEVH 104 +L++ + + D + T L++SL++ G+ Y G+A+ FRA + KP++ V Sbjct: 98 DLVDTLRQAKSDPNITGLVLSLNNFAGADQPSLQYIGKALSEFRA-----SGKPILA-VG 151 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA-- 162 E A Y ++ ++ I + VG G+ Y K LDKL VS + K+ Sbjct: 152 ENYTQAQYFLASYADKIYLSPQGSVGLQGMATNNLYYKSLLDKLDVSTHIFRVGTYKSAV 211 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 EP +++P+A ++ + ++ +V+ +R++ Sbjct: 212 EPLMRDQMSPQARSADSQWLNGMWSNYLTIVATNRHL 248 >gi|238026598|ref|YP_002910829.1| peptidase, U7 family protein [Burkholderia glumae BGR1] gi|237875792|gb|ACR28125.1| Peptidase, U7 family protein [Burkholderia glumae BGR1] Length = 330 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 10/241 (4%) Query: 7 KIKTRYV-MLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R++ ++++V + + F +S + +S H A ++I G+I ++ ++ ++ Sbjct: 46 RIAFRFLWLIAVVAIMLAVFDFSGDGKLSSSRHTALVSIDGEIAAGNSANADDINSALDD 105 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 106 AFDDSGTVGVVLHINSPGGSPVQAGIVYDEIRRLRKKYPSKPLYVVVSDMCASGGYYIAA 165 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLGV + S K PFS PK + Sbjct: 166 AADRIYVNKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFYDPFSPETPKMDE 225 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F++ V + R + + G WTGA++ ++GL D G + V + Sbjct: 226 HAQSMLDEIHAQFIQAVKDGRGKRLHDSPDIFSGLFWTGAKSVELGLADGFGTTDSVARD 285 Query: 237 L 237 + Sbjct: 286 V 286 >gi|317179610|dbj|BAJ57398.1| protease IV [Helicobacter pylori F30] Length = 292 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 125/241 (51%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++R + ++G++++ A K+ LID + ++ L Sbjct: 192 NLVNEQYQMFVDDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|218888246|ref|YP_002437567.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759200|gb|ACL10099.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 335 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 7/250 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAA 108 QE++ ++ + D A+IV++ SPGG A + ++ + + + R + V+ + + AA Sbjct: 82 QEVVAQLRLAAEDPDVKAVIVAIDSPGGGVTASDVLYHELMRHRERTGQKVVALMMDTAA 141 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY + A++ IVA +++ GSIGV+F P V +DK+GV KS K SPF Sbjct: 142 SGGYYTALAADRIVAHPSTVTGSIGVIFLRPEVAGLMDKIGVRAVVSKSGEHKDMGSPFR 201 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E + + Q ++ F LV E R + +D RI T +A GL+D +G Sbjct: 202 EGTDEERALFQSIIADMNGRFQGLVRERRPASHGHEAAFADARILTARQALAAGLVDRIG 261 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPP----KNYWFCDLKNLSIS-SLLEDTIPLMKQTK 283 E+ +L +R + P Y S +L++ +P M Sbjct: 262 YFEDALAETASLTGTSDLRVVTYRREPLPGATEYATATTPAGSGRMALIDLGLPGMDAAS 321 Query: 284 VQGLWAVWNP 293 G +W P Sbjct: 322 RAGFHYLWLP 331 >gi|127512869|ref|YP_001094066.1| signal peptide peptidase SppA, 67K type [Shewanella loihica PV-4] gi|126638164|gb|ABO23807.1| signal peptide peptidase SppA, 67K type [Shewanella loihica PV-4] Length = 613 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 2/171 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNII 121 DD A+++ + SPGGSA+A E I + + +K KPV+ + AAS GY IS +++ I Sbjct: 361 DDKVKAVVLRVDSPGGSAFASEQIRQEVLALKAANKPVVVSMGTYAASGGYWISASADYI 420 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A T+L GSIG+ + L +LG+ V +S A S ++ + +++Q Sbjct: 421 YATPTTLTGSIGIFGMMTTFEDSLAELGIHTDGVSTSGWTAFSST-QGISDELKEIIQRH 479 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ Y F+ LVSE R + ++ ++ GR+W+G A ++GL+D +G E+ Sbjct: 480 IERGYQDFISLVSEERGMKPEEVDKIAQGRVWSGKRALELGLVDELGDLEQ 530 >gi|261378542|ref|ZP_05983115.1| signal peptide peptidase SppA [Neisseria cinerea ATCC 14685] gi|269145092|gb|EEZ71510.1| signal peptide peptidase SppA [Neisseria cinerea ATCC 14685] Length = 328 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 10/209 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +E N+PH A + + G+I + E L + +E ++ A A+I+ +SPGGS Sbjct: 72 RLEGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIIIRANSPGGSPVVSN 131 Query: 85 AIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 F I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ Sbjct: 132 TAFEEIRRLKAQHPNIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDA 191 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--I 199 ++K+GV + + K PFS P+ ++ ++++ + F++ V R + Sbjct: 192 TELMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKAGRGSRL 251 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + GR++TGA+A+KVGLID +G Sbjct: 252 KFQQYPDVFSGRVYTGADAQKVGLIDGLG 280 >gi|37523775|ref|NP_927152.1| protease IV [Gloeobacter violaceus PCC 7421] gi|35214780|dbj|BAC92147.1| protease IV [Gloeobacter violaceus PCC 7421] Length = 632 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 100/185 (54%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G ++ S+ LI+ + R + A+++ ++SPGG+ + + R +++++ +KPV+ + Sbjct: 368 GPVQGSEPLIKALREAGRREDIKAVVMRVNSPGGAGLGCDLVRREVERLRAKKPVVVSMG 427 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + AAS GY I+ ++ IVA ++ GSIG+ P V+ L ++ + K Sbjct: 428 DSAASGGYWIAMDASAIVAQPSTQTGSIGIFAVIPNVEQLNRDLTLTPEVFKRGARADVL 487 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S +NP+ ++ + SSY FV L ++ RN + L+ GR W G +A ++GL+ Sbjct: 488 SGNRPLNPEEAKIFDQELLSSYRRFVALAAKGRNKTVPQMEALAQGRTWLGRKALELGLV 547 Query: 225 DVVGG 229 D +GG Sbjct: 548 DRLGG 552 >gi|85059328|ref|YP_455030.1| protease 4 [Sodalis glossinidius str. 'morsitans'] gi|84779848|dbj|BAE74625.1| protease IV [Sodalis glossinidius str. 'morsitans'] Length = 616 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 14/181 (7%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 ++I D A++ ++SPGGS A E I + + KPV+ + +AAS GY Sbjct: 351 DQIRDARMDPDIKAIVFRVNSPGGSVTASEVIRSELAAARAAGKPVVISMGGIAASGGYW 410 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPSPF 167 +S +N I+A+ ++L GSIG+ V+ LD +GV V +SP+ K P+ F Sbjct: 411 VSTPANYIIASASTLTGSIGIFGVVNTVENSLDSIGVHTDGVATSPLADVSLTKTLPAEF 470 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 S QMMQ V++ Y F+ LV++SR+ ++ + G +W G++A + GL+D V Sbjct: 471 S-------QMMQLSVENGYRNFITLVAQSRHKTPEEIDKIGQGHVWIGSDAVQNGLVDRV 523 Query: 228 G 228 G Sbjct: 524 G 524 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 6/142 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ + + D + T L++SL G+ A E I +A+++ ++ I V + + A Sbjct: 96 DVVDTLRQAKGDANITGLVLSLKDFAGADQASLEYIGKALREFRDSSKPIYAVGDSYSQA 155 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ +N I V G+ Y K LDKL V+ + K+ PF Sbjct: 156 QYYLASYANKIYLTPQGAVDLHGIATNNLYYKTLLDKLKVNSHIFRVGTYKSAVEPFLRD 215 Query: 171 NPKAVQMMQDVVDSSYHWFVRL 192 N M D ++ W +L Sbjct: 216 N-----MSDDAREADSRWVGQL 232 >gi|225455748|ref|XP_002268894.1| PREDICTED: similar to SPPA (signal peptide peptidase); protease IV/ serine-type endopeptidase [Vitis vinifera] Length = 686 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++ IE+I + A+I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 411 SEQFIEKIRSVRDSKRYKAVIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAAS 470 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM----KAEPS 165 GY ++ + IVA +L GSIGV+ + +K+G + + + AE Sbjct: 471 GGYYMAMGAGTIVAENLTLTGSIGVVTGKFNLGTLYEKIGFNKEIISRGRFAELTAAEQR 530 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF P ++ ++Y F + SR++ DK + GR+WTG +A GL+D Sbjct: 531 PF---RPDEAELFAKSAQNAYKQFRDKAAFSRSMAVDKMEENAQGRVWTGKDAASRGLVD 587 Query: 226 VVGG 229 +GG Sbjct: 588 AIGG 591 >gi|226326247|ref|ZP_03801765.1| hypothetical protein PROPEN_00089 [Proteus penneri ATCC 35198] gi|225205325|gb|EEG87679.1| hypothetical protein PROPEN_00089 [Proteus penneri ATCC 35198] Length = 404 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 11/211 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGG 78 SS ++ ++A + ++G I D + + +I + D + AL++ ++SPGG Sbjct: 107 SSLPANDEGNIAVVVVQGAIIDGESIPGSAGGTTIANQIRQARLDPNIKALVLRVNSPGG 166 Query: 79 SAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S A E I + K +K V+ + +AAS GY IS +N I+A+ ++L GSIG+ Sbjct: 167 SVSASEQIRSEVAAFKQQKKHVVVSMGGLAASGGYWISTPANKIIASPSTLTGSIGIFGV 226 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L+ +GV V +SP+ A S +++ + +++Q ++S Y F+ LV+ESR Sbjct: 227 INTFENSLESIGVYTDGVTTSPL-AGLSVTNKLPEEFAELLQLNIESGYKTFIHLVAESR 285 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ GR+W G +AK VGL+D G Sbjct: 286 KKTPAQIDRIAQGRVWVGIDAKNVGLVDEFG 316 >gi|317014847|gb|ADU82283.1| putative protease IV [Helicobacter pylori Gambia94/24] Length = 292 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ +A + LID + Sbjct: 192 NLVNEQYQMFVDDVAKARKLNAKDYKDFAEGKVFSAQKALNLKLIDKI 239 >gi|148656516|ref|YP_001276721.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] gi|148568626|gb|ABQ90771.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] Length = 342 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 1/187 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++L+ +I + D A+++ + SPGGS A ++ ++K+++R K ++ + +AAS Sbjct: 98 EQLLSQIRTAANDSRVKAVVLRVDSPGGSVVASNELYVELKKLRDRGKHLVISMGTVAAS 157 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY IS A I A +L GS+GV+ ++LG+ KS +K SP Sbjct: 158 GGYYISMAGERIYANPDTLTGSLGVIVSLLNYDEAFERLGLREYVYKSGDLKDIGSPLRP 217 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +V+ +Y FV ++ E R + + + L+DGRI+TG +AK +GLID +G Sbjct: 218 PTSEEEAVWNALVNEAYQGFVDVIVEGRGMERTEVIRLADGRIYTGRQAKALGLIDELGN 277 Query: 230 QEEVWQS 236 E+ + Sbjct: 278 LEDAIEG 284 >gi|118467630|ref|YP_885858.1| signal peptide peptidase SppA, 67K type [Mycobacterium smegmatis str. MC2 155] gi|118168917|gb|ABK69813.1| signal peptide peptidase SppA, 67K type [Mycobacterium smegmatis str. MC2 155] Length = 594 Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 7/163 (4%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + + SPGGS E ++R + + ++ KPV+ + +AAS GY +S A++ IVA ++ Sbjct: 352 LRVDSPGGSVTGSETVWREVVRTRDAGKPVVASMGAVAASGGYYVSMAADEIVANAGTIT 411 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMMQDVVDSSY 186 GSIGVL + DKLGV +V+++ + +PF++ V+ D++ Y Sbjct: 412 GSIGVLTGKFVSRELKDKLGVGSDAVRTNANADAWSTNAPFTDEQHARVEAEADLL---Y 468 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 FV +E R +P ++ L+ GR+WTG++AK+ GL+D VGG Sbjct: 469 RDFVERAAEGRKLPIEEMESLARGRVWTGSDAKERGLVDHVGG 511 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 3/211 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + DD LI + P + + + AI RKP + + Sbjct: 65 RQAVAAIHRAAEDDRVAGLIARVQLPAAAPGPVQELRDAIVAFGERKPTVAWAETYPGTM 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ A I VG IG +++ LDK G+ + + K+ + F+E Sbjct: 125 SYYLASAFREIWMQPAGSVGLIGFATNATFLRDALDKAGIEAQFIARGEYKSAANVFTEG 184 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + D +++S + +++SR + D L+D A GL+D +G Sbjct: 185 SYTEPHREADARLIESLQEQVWQGIAQSRGLDPDTINTLADQAPLLREAAVTAGLVDRIG 244 Query: 229 GQEEVWQSLYAL-GVDQSIRKIKDWNPPKNY 258 ++E ++ + L G ++ D PP+ + Sbjct: 245 FRDEAYKRIGELAGGPENTDADHDDAPPRLF 275 >gi|319788342|ref|YP_004147817.1| signal peptide peptidase SppA, 67K type [Pseudoxanthomonas suwonensis 11-1] gi|317466854|gb|ADV28586.1| signal peptide peptidase SppA, 67K type [Pseudoxanthomonas suwonensis 11-1] Length = 635 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 10/207 (4%) Query: 33 DNSPHVARIAIRGQIEDSQ--------ELIERIERISRDDSA-TALIVSLSSPGGSAYAG 83 D P VA + G+I E + R +R+D A+++ + SPGG +A Sbjct: 335 DKRPQVAVVVAEGEITGGDQPAGTIGGESTSALLRQAREDEDIKAVVLRVDSPGGEVFAS 394 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 395 EQIRREVALLKAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGLVPNFT 454 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P+ +++Q V++ Y F+ V+++R + Sbjct: 455 RTLDKIGVHTDGVGTTRYAGAFDVTRPLDPEVGRVIQSVINKGYADFIGKVADARERSVE 514 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ GR+W+GA+A GL+D +GG Sbjct: 515 DIDQVARGRVWSGAQALDRGLVDAMGG 541 >gi|162448648|ref|YP_001611015.1| protease IV [Sorangium cellulosum 'So ce 56'] gi|161159230|emb|CAN90535.1| protease IV [Sorangium cellulosum 'So ce 56'] Length = 602 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Query: 31 VEDNSPHVARIAIRGQIEDSQE-LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +E + V+R RG S+E L+ + ++ +I+ + SPGGSA A + I Sbjct: 325 IEVHGAIVSRARFRGASLASEERLVASLRAARQNPRVQGVILHVDSPGGSALASDRIHHE 384 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + ++ KPV+ + +AAS GY ++ A++ IVA ++ GSIGV+ + P L++LG Sbjct: 385 VTRLAEVKPVVACLSNVAASGGYYVAAAAHAIVAQPQTITGSIGVVSARFALGPLLERLG 444 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 VS VK SP +++ +++ +D+ Y F+R+V+ R P ++ L+ Sbjct: 445 VSTDVVKRGARADLFSPSRKLDEGERAVVERELDAIYAAFLRVVARGRRRPVEEIEPLAQ 504 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+++GA+A+ GL+D++GG E L Sbjct: 505 GRVYSGADAQARGLVDMLGGFERALHEL 532 >gi|42522622|ref|NP_968002.1| signal peptide peptidase [Bdellovibrio bacteriovorus HD100] gi|39575154|emb|CAE78995.1| signal peptide peptidase [Bdellovibrio bacteriovorus HD100] Length = 322 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 2/215 (0%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS 75 +L+ ++ +F + + + G I + ++ I+ +++ DD A+++S++S Sbjct: 21 ALLKMSGDFFGSEDKRVTAKNTILHLEMNGVILNGKKFIKNLKKYRDDDKVKAILISINS 80 Query: 76 PGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGGS + +F I++V++ +KPV+ + AS Y + A + IV A +LVGSIG Sbjct: 81 PGGSVGPSQELFAEIKRVRDEIKKPVVCVSTGVMASGAYYAAVACDKIVVAPGALVGSIG 140 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ ++ ++ D +S S+ S K + + + + Q ++D Y F V Sbjct: 141 VIMEFANLEKLYDWAKISRYSITSGKFKDSGAEYRPMREDERSLFQSMIDEVYAQFKGTV 200 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + R + + +DGR++TGA A KVG D G Sbjct: 201 ATERKLKEEVVAEYADGRVFTGATAVKVGFADQEG 235 >gi|310778441|ref|YP_003966774.1| signal peptide peptidase SppA, 67K type [Ilyobacter polytropus DSM 2926] gi|309747764|gb|ADO82426.1| signal peptide peptidase SppA, 67K type [Ilyobacter polytropus DSM 2926] Length = 578 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 2/171 (1%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 RD + +++ + SPGGSA A E I I+ ++ KPV + +AS GY IS + + I Sbjct: 337 RDKNVVGIVLRIDSPGGSALASEVINAKIRSIE--KPVYVSMGGTSASGGYYISASGDRI 394 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++ GSIGV+ P V KLG+ I+SV+ + S + + + + Sbjct: 395 FAERDTITGSIGVVSLVPDVSELAGKLGIKIESVQKGKLSGIYSITDGMTKGERERIYES 454 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Y F VS RNIP + L+ GR+W G EA + GL+D +GG ++ Sbjct: 455 SSKIYSEFKERVSSGRNIPMSQMESLAGGRVWLGEEALEKGLVDGIGGLQD 505 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 5/169 (2%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 I G+ + ++ +++ D LI+ + S + E + R I++ + + Sbjct: 73 FTIEGEKVNFYNMLNYLDKGKNDQRIDGLILKVDSVALNRAQVEELGRKIKEYREVGKKV 132 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGS--IGVLFQYPYVKPFLDKLGVSIKSVKSS 158 + Y ++ ++ I+ + GS G + PY+K DK+G+ + Sbjct: 133 YAFSRGFQNRNYSLAVNADEIIMPPSRGAGSNISGYFMELPYMKRLSDKIGIKYDVIHVG 192 Query: 159 PMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+ + E++P+ + + ++D Y+ FV+ VS SRNI ++TL Sbjct: 193 DYKSYGENYVREEMSPEFRENITRLLDRIYYNFVQDVSVSRNID-ERTL 240 >gi|23015704|ref|ZP_00055473.1| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 560 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 +Q + E DD A++ + SPGGS A + + + + + KPV+ + AA Sbjct: 324 AQTVAEAFRDAVDDDKVKAILFRVDSPGGSYTASDTVHHEVARARAAGKPVVVSMGNYAA 383 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ++ ++ I+AA ++ GSIGV ++ F KLG+S ++ S Sbjct: 384 SGGYFVAMGADRIIAAPGTITGSIGVFTGKVVLEDFWKKLGISWDQMQRGDNAGIWSANQ 443 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+A + ++D Y F S++RN+ + L+ GR+WTGA+AK+ GL+D +G Sbjct: 444 PFTPQAKARIDALLDHIYADFTGKASQARNLDAARMDKLARGRVWTGADAKESGLVDGLG 503 Query: 229 GQEEVWQSL 237 G E L Sbjct: 504 GWTEALAQL 512 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 13/205 (6%) Query: 51 QELIERIERISRDDSATALIVSL--SSPGGSAYAGEAIFR-AIQKVKNRKPVITEVHEMA 107 ++ +E ++R + D T L ++ SS G AG R A+ + + E Sbjct: 76 RQTVEALDRAALDSRVTGLFATMGHSSLG---LAGRQDLRDAVIRFRASGKSAVLFAETM 132 Query: 108 ASAG-----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 G Y ++ A + + + VG G+ + P++K LD LG+ + K+ Sbjct: 133 GEGGSGTLDYYLAAAFSQVWLQPSGDVGLTGLWVESPFIKGTLDLLGMKAQFSGRHEYKS 192 Query: 163 EPSPFSEVN--PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 F+E P + + ++DS + ++ +R +P D+ L + +EA Sbjct: 193 AIDMFTETGFTPAHRENLGRLLDSWSEQIISGIAANRGLPEDRVRDLMGKGPFLASEALN 252 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQS 245 L+D VG +++ W+ + +G D++ Sbjct: 253 AKLVDKVGYRDQAWEIVAGIGTDKA 277 >gi|52548349|gb|AAU82198.1| protease IV [uncultured archaeon GZfos11H11] Length = 251 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 2/179 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I+ IE + +I ++SPGG+ +A + I I+ + KP I V E AS Y Sbjct: 37 IIKDIEEVENKRKIKTVIFEINSPGGTPFASKEIATCIENMD--KPAIAWVREYGASGAY 94 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A + IVA E S VGSIG + P + + K G+ ++++++ K P+ + Sbjct: 95 WIASACDEIVADELSTVGSIGAMSIRPDIGELMKKFGIDVETLRTGIYKGMGLPYEKPTE 154 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++M+ +D F+ V+++R + K LS +++ G EAK++GLID +GG+E Sbjct: 155 EERELMKKELDEIQDNFLNAVAKNRKLDDAKMKELSTAKVYLGREAKEMGLIDHLGGKE 213 >gi|83748461|ref|ZP_00945483.1| protease IV [Ralstonia solanacearum UW551] gi|83724872|gb|EAP72028.1| protease IV [Ralstonia solanacearum UW551] Length = 378 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERI 60 +I R+V L ++ + F S+ + H A +++ G+I S + + +E Sbjct: 92 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVSLDGEIAASTNASAENINASLEAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D +G + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGIGSADFVARNV 331 >gi|119472416|ref|ZP_01614534.1| protease IV, a signal peptide peptidase [Alteromonadales bacterium TW-7] gi|119444938|gb|EAW26236.1| protease IV, a signal peptide peptidase [Alteromonadales bacterium TW-7] Length = 621 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/229 (32%), Positives = 121/229 (52%), Gaps = 21/229 (9%) Query: 15 LSLVTLTVVYFSWSSHVEDN--SPHVARIAIRGQIEDSQELIERIE--------RISR-D 63 LSLV VV+ DN + VA + RG I D + I R +R D Sbjct: 308 LSLVKPPVVF--------DNPITEKVAVVVARGTIVDGERRAGEIGGDSTAALLRKARLD 359 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIV 122 D A+++ + S GGS +A E I + +K KPVI + +AAS GY I+ A+N I Sbjct: 360 DKVKAVVLRIDSGGGSMFASEVIRAEVLALKAAGKPVIASMSSVAASGGYWIASAANEIW 419 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA +++ GSIGV + + L K+GV V ++ M A S +N K Q++Q V Sbjct: 420 AAPSTITGSIGVFGTFMTFENTLSKIGVYSDGVATTEM-AGFSVTRPLNEKMAQVIQMSV 478 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + +Y F+ +V+++R + ++ ++ GR+W ++A ++GLID +G ++ Sbjct: 479 EEAYGRFLNVVAQARGMTPEEVDAIAQGRVWIASQALELGLIDKLGDKQ 527 >gi|212635276|ref|YP_002311801.1| peptidase S49, SppA 67 kDa type:peptidase S49, SppA [Shewanella piezotolerans WP3] gi|212556760|gb|ACJ29214.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Shewanella piezotolerans WP3] Length = 613 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 98/175 (56%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYL 113 E + + DDS A+++ + SPGGSA+A E I + + +K KP++ + AAS GY Sbjct: 353 ELLRKARFDDSIKAVVLRVDSPGGSAFASEQIRQEVLALKAANKPIVVSMGSYAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L +GV V +S A S ++P+ Sbjct: 413 ISASADYIYATPTTLTGSIGIFGMVTTFEDSLASIGVHTDGVATSDW-AGFSVTKGISPQ 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ Y F+ LV+ R++ ++ ++ GR+WTG +A ++GL+D +G Sbjct: 472 ISAVIQRHIERGYKDFISLVATERDMTLEQVDNIAQGRVWTGRKALELGLVDGIG 526 >gi|253699780|ref|YP_003020969.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M21] gi|251774630|gb|ACT17211.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M21] Length = 293 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 114/204 (55%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V + ++G I D QE + ++ + +D A+++ + SPGG + I A++ V K Sbjct: 42 VGLVELKGPIIDGQETVRQLRELKKDKRVKAVVLRIDSPGGVVGPSQEIHAAVKGVAKVK 101 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ + +AAS GY + + +I A ++ GSIGVL ++ ++ +DK+G+ ++K+ Sbjct: 102 KVVVSMGSVAASGGYYAAAPATLIYANPGTITGSIGVLMKFSNIEGLMDKVGLKAFTIKT 161 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++ + M+Q V+DS++ F+R V+E R +P ++ ++DGRI++G + Sbjct: 162 GKFKDVGSPARTMSDEERGMLQGVIDSTHQQFIRAVAEGRKLPVEQVRAIADGRIFSGEQ 221 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG 241 A L+D +G ++ + LG Sbjct: 222 ALAAKLVDRIGTLQDAVEEAGRLG 245 >gi|52549671|gb|AAU83520.1| protease IV [uncultured archaeon GZfos30H9] Length = 251 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 2/179 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 LI+ IE A++ ++SPGG+ +A + I I+ + KP I V E AAS Y Sbjct: 37 LIKDIEEAEIKRKIKAVLFEINSPGGTPFASKEIATCIENMD--KPAIAWVREYAASGAY 94 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A + IVA E S VGSIG + P + + K G+ ++++++ K P+ ++ Sbjct: 95 WIASACDEIVADELSTVGSIGAMSIRPDIGELMKKFGIEVETLRTGIYKGLGLPYEKLTE 154 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++M+ +D F+ V+++R + K LS +++ G EAK +GLID +GG+E Sbjct: 155 EERELMKKELDEIQDNFLNAVAKNRKLDDVKMKELSTAKVYLGREAKDMGLIDHLGGKE 213 >gi|207743609|ref|YP_002260001.1| protease protein [Ralstonia solanacearum IPO1609] gi|206595008|emb|CAQ61935.1| protease protein [Ralstonia solanacearum IPO1609] Length = 416 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERI 60 +I R+V L ++ + F S+ + H A +++ G+I S + + +E Sbjct: 130 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVSLDGEIAASTNASAENINASLEAA 189 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 190 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 249 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 250 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 309 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D +G + V +++ Sbjct: 310 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGIGSADFVARNV 369 >gi|109948135|ref|YP_665363.1| protease IV [Helicobacter acinonychis str. Sheeba] gi|109715356|emb|CAK00364.1| protease IV [Helicobacter acinonychis str. Sheeba] Length = 292 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 125/241 (51%), Gaps = 6/241 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I ++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSTPPNLAKLYLNGAIFSTEYFNKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKIPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKDFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++V+ Y FV V+++RN+ ++G++++ +A + LID + ++ L Sbjct: 192 NLVNEQYQMFVNDVAKARNLNPKDYKNFAEGKVFSAQKALSLKLIDKISTIKQAQNRLME 251 Query: 240 L 240 L Sbjct: 252 L 252 >gi|297734121|emb|CBI15368.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 7/184 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++ IE+I + A+I+ + SPGG A A + ++R I+ + KPVI + ++AAS Sbjct: 150 SEQFIEKIRSVRDSKRYKAVIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAAS 209 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM----KAEPS 165 GY ++ + IVA +L GSIGV+ + +K+G + + + AE Sbjct: 210 GGYYMAMGAGTIVAENLTLTGSIGVVTGKFNLGTLYEKIGFNKEIISRGRFAELTAAEQR 269 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PF P ++ ++Y F + SR++ DK + GR+WTG +A GL+D Sbjct: 270 PF---RPDEAELFAKSAQNAYKQFRDKAAFSRSMAVDKMEENAQGRVWTGKDAASRGLVD 326 Query: 226 VVGG 229 +GG Sbjct: 327 AIGG 330 >gi|329769509|ref|ZP_08260919.1| hypothetical protein HMPREF0433_00683 [Gemella sanguinis M325] gi|328838724|gb|EGF88322.1| hypothetical protein HMPREF0433_00683 [Gemella sanguinis M325] Length = 322 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 101/181 (55%), Gaps = 2/181 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I +I+ S D + A+++S+++PGG Y I+ A++ + K V + + A S GY Sbjct: 86 IINQIKVASADPNVKAILLSVNTPGGGVYETAEIYNALKN--SGKDVYVAMKKQATSGGY 143 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS A+ I A + GSIGV+ Y + FL++ G+ ++++S KA ++ Sbjct: 144 YISMAAKKIYANSETTTGSIGVIMSYVSAQKFLNEHGIKQETIRSGDQKAIGGLAEDLPE 203 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ Q+ +Y FV+ ++E RN+ D+ L+DGR ++G +A + L+D +G ++E Sbjct: 204 STRKIYQEQNKEAYDRFVKAIAEGRNMSEDEVKKLADGRTYSGKQAVENKLVDKIGTEDE 263 Query: 233 V 233 + Sbjct: 264 L 264 >gi|319760105|ref|YP_004124044.1| peptidase S49 [Alicycliphilus denitrificans BC] gi|317119711|gb|ADV02199.1| peptidase S49 [Alicycliphilus denitrificans BC] Length = 315 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 37 HVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI--FR 88 HV I I G I ++ + + + + DDSA+A+++ + SPGGS + I F Sbjct: 63 HVPVIRIEGGIAGDSTKINADSVNKLLAKAFDDDSASAVVLYIDSPGGSPAEADRIGSFI 122 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A +K + KP+ + M ASAGY+I+ + I A++ SL+GSIG + + K+ Sbjct: 123 ARKKQETGKPLYSVCANMCASAGYMIAMHGDEIYASKYSLIGSIGAILSSWNFSQAIGKV 182 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + S +KA +P++ V V+ Q++VD F V R + L Sbjct: 183 GVQHNAYASGKLKAMLNPYAPVKAGDVEKAQELVDGMGKVFAEQVRFYRKGKLTSKVDLF 242 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G +W+G EAK GL+DV+G ++V Sbjct: 243 TGEVWSGEEAKTYGLVDVIGTLDDV 267 >gi|315126527|ref|YP_004068530.1| protease IV, a signal peptide peptidase [Pseudoalteromonas sp. SM9913] gi|315015041|gb|ADT68379.1| protease IV, a signal peptide peptidase [Pseudoalteromonas sp. SM9913] Length = 621 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 14/215 (6%) Query: 31 VEDNSPHVARIAI---RGQIEDSQELIERIE--------RISR-DDSATALIVSLSSPGG 78 +E ++P ++A+ +G I D + I R +R DD A+++ + S GG Sbjct: 315 IEFDNPMTEKVAVVVAKGTIVDGERRAGEIGGDSTAALLRKARLDDKVKAVVLRIDSGGG 374 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S +A E I + +K KPVI + +AAS GY I+ A+N I AA +++ GSIGV Sbjct: 375 SMFASEVIRAEVLALKAAGKPVIASMSSVAASGGYWIASAANEIWAAPSTITGSIGVFGT 434 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + L K+GV V ++ + A S +N K +++Q V+ +Y F+ +V+E+R Sbjct: 435 FMTFEDTLAKIGVYSDGVATTEL-AGFSITRPLNEKMAKVIQMSVEEAYGRFLDVVAEAR 493 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 N+ ++ ++ GR+W ++A+++GL+D +G +++ Sbjct: 494 NMTPEQVDKIAQGRVWIASQAQELGLVDKLGNKQD 528 >gi|217032126|ref|ZP_03437626.1| hypothetical protein HPB128_16g86 [Helicobacter pylori B128] gi|298735604|ref|YP_003728127.1| protease IV [Helicobacter pylori B8] gi|216946274|gb|EEC24882.1| hypothetical protein HPB128_16g86 [Helicobacter pylori B128] gi|298354791|emb|CBI65663.1| protease IV [Helicobacter pylori B8] Length = 292 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 121/228 (53%), Gaps = 6/228 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ +V+L +V +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS-FVLLLIV---LVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + ++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYVSKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++V+ Y FV V+++R + ++G++++ A K+ LID + Sbjct: 192 NLVNEQYQMFVDDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKI 239 >gi|148241743|ref|YP_001226900.1| periplasmic serine proteases (ClpP class) [Synechococcus sp. RCC307] gi|147850053|emb|CAK27547.1| Periplasmic serine proteases (ClpP class) [Synechococcus sp. RCC307] Length = 261 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 104/178 (58%), Gaps = 2/178 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 L++ + SPGG+ + I +A+ +++ V+ ++AS G + CA++ IVA + Sbjct: 45 LLLRIDSPGGTVGDSQEIHQALLRLRESGCQVVASYGNISASGGVYVGCAADRIVANAGT 104 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIGV+ + ++ L+++G+ ++VKS K SP ++ ++Q ++DSSY Sbjct: 105 ITGSIGVILRGNNLEKLLERVGIRFETVKSGLYKDILSPDKPLSEGERSILQALIDSSYS 164 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 FV V++ R + + +DGR+++GA+A ++G++D++G ++ + L G+D+ Sbjct: 165 QFVAAVAQGRKLSEETVRTFADGRVFSGAQALELGMVDLLGDEDTARREAARLAGLDE 222 >gi|126433677|ref|YP_001069368.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. JLS] gi|126233477|gb|ABN96877.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. JLS] Length = 593 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 7/171 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNII 121 D +A+++ + SPGGS E I+R + + + PV+ + +AAS GY +S ++ I Sbjct: 343 DKDVSAIVLRVESPGGSVTGSETIWREVLRTREGGTPVVASMGAVAASGGYYVSMGADAI 402 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMM 178 VA ++ GSIGV+ + D+LGV SV+++ + SPF++ V+ Sbjct: 403 VANPGTITGSIGVVTGKLVARELKDRLGVGSDSVRTNANADAWSANSPFTDEQQAHVEAE 462 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D+ Y FV V++ R + D+ ++ GR+WTGA+AK GL+D +GG Sbjct: 463 ADLF---YTDFVERVADGRGLSVDEVAEVARGRVWTGADAKDRGLVDELGG 510 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 2/192 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I R + DD LI + A + + AI +KP + + Sbjct: 65 RQVVAAIHRAADDDRVAGLIARVQISAAPAAPVQELREAIAAFSAKKPSVAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ A + + VG +G +++ LDK G+ + K+ + F++ Sbjct: 125 SYYLASAFREVWMQPSGTVGLVGFATSALFLRDALDKAGIQAQFTARGEYKSAANLFTQD 184 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + D +++S + V+ESR + D L+D A GL+D +G Sbjct: 185 SYTEPHREADSRLIESLNQQVLTAVAESRKLNPDDIDALADKAPLLRDAAVDGGLVDRIG 244 Query: 229 GQEEVWQSLYAL 240 ++E + + L Sbjct: 245 FRDEAYARVAEL 256 >gi|258652617|ref|YP_003201773.1| signal peptide peptidase SppA, 36K type [Nakamurella multipartita DSM 44233] gi|258555842|gb|ACV78784.1| signal peptide peptidase SppA, 36K type [Nakamurella multipartita DSM 44233] Length = 561 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 19/221 (8%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDS-------------ATALIVSLSSPGGSAYAG 83 HVA + I+G I+ + + R + D+ A A+++ + SPGGSA A Sbjct: 273 HVALVTIQGTIDSGRSRRGLMGRTAGSDTVGAALRAAAADERARAVVLRVDSPGGSAVAS 332 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I+R + ++ KPVI + +AAS GY ++C ++ IVA +L GSIGV V+ Sbjct: 333 ETIWREVCLLQRAKPVIVAMGAVAASGGYYVACPADRIVALPATLTGSIGVFGGKVVVQE 392 Query: 144 FLDKLGVSIKSVKSSP---MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + +LG+S SV+ M + PF E + D + Y FV V++ R Sbjct: 393 LMTRLGLSAGSVQRGAHARMFSSRRPFDEDEKTNLAAGLDAI---YDDFVGKVAQGRGRS 449 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + ++ GR+WTG +A GL+D +GG + + A G Sbjct: 450 TGQIEAVARGRVWTGRDAVAAGLVDELGGLRDAVRLARARG 490 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 14/145 (9%) Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS--------I 152 T + A AGY+++ A + + VG +GV + +++ LDKLG+ Sbjct: 97 TFAEQPGAMAGYVLATAFDELWLQPGGEVGLLGVALETTFLRGSLDKLGLQPQLDQRHEY 156 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K+ + M+ E ++ + +A + VV S + V +++ R + + L DG Sbjct: 157 KNAADTIMRTE---YTRAHREA---LDRVVGSVFDDAVEAIAQGRRLDPAQVRTLVDGGP 210 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSL 237 A+ GL+D +G ++E ++ Sbjct: 211 TLAPAARDAGLVDRLGYRDEALAAM 235 >gi|218962159|ref|YP_001741934.1| putative protease IV (signal peptide peptidase) [Candidatus Cloacamonas acidaminovorans] gi|167730816|emb|CAO81728.1| putative protease IV (signal peptide peptidase) [Candidatus Cloacamonas acidaminovorans] Length = 571 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 94/172 (54%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 I++I + A+++ ++SPGGSA E I++ + K+K P++ + AAS GY ISC Sbjct: 323 IKQIHQHKDIKAVVLRINSPGGSALESELIYQQLLKLKREYPLVVSMGGTAASGGYYISC 382 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A + ++A +L GSIGV+ P + K+GV +++K SP +P ++ Sbjct: 383 AGDYLIADPGTLTGSIGVIGLIPEMAGLGKKIGVRSQTLKYGKFAGALSPLEHYDPALIE 442 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ ++Y+ F + V +R I + +++GRI++ +A LID +G Sbjct: 443 SLKRSSTATYNEFKQRVMTARKISPENIEAVAEGRIFSAEDALTHKLIDEIG 494 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 11/212 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAAS 109 QE+ +I+ ++D+ +++ + A E + AI K+ KPV+ Sbjct: 74 QEICAKIKLAAKDERIKGILLQPQMIMTNYPALEEMSLAIGTFQKSGKPVLAFGENFTQG 133 Query: 110 AGYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 L SCA I + S ++ GV + K LDKLG+ + ++S K PFS Sbjct: 134 DYLLASCADKIYMEPSASAGLALQGVSANMLFYKEMLDKLGIKMHILQSGEYKGAGEPFS 193 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGL 223 E++ + + + Y+ + LV+++R + + + + R + +AK++ L Sbjct: 194 QTELSKGTRENIDAALYDIYNHLLSLVAQNRKLETTQVKDIFEKRDDFFLSAEKAKELKL 253 Query: 224 IDVVGGQEEVWQSLYALGVDQ-SIRKIKDWNP 254 ID ++E+ +S LG+++ + KI +++P Sbjct: 254 IDYAMSRDEMLKS---LGLEEDNFMKIANYSP 282 >gi|207725234|ref|YP_002255630.1| protease protein [Ralstonia solanacearum MolK2] gi|206590468|emb|CAQ37430.1| protease protein [Ralstonia solanacearum MolK2] Length = 414 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 9/240 (3%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERI 60 +I R+V L ++ + F S+ + H A +++ G+I S + + +E Sbjct: 128 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVSLDGEIAASTNASAENINASLEAA 187 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 188 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 247 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 248 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 307 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D +G + V +++ Sbjct: 308 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGIGSADFVARNV 367 >gi|313127075|ref|YP_004037345.1| signal peptide peptidase a [Halogeometricum borinquense DSM 11551] gi|312293440|gb|ADQ67900.1| signal peptide peptidase A [Halogeometricum borinquense DSM 11551] Length = 330 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 4/219 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 R+ R S +++E+I+ + D + L+V L++PGG+ + I RA+ + P Sbjct: 81 GRLPTRPGGASSDDVVEQIQTAADDGAVDGLLVRLNTPGGAVLPSDDIRRAVAEFDG--P 138 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 I + AS GY I+ + I A + S+VGSIGV+ V D+LGVS + + Sbjct: 139 TIAYATDTCASGGYWIASGCDEIWAHDVSIVGSIGVIGSSVNVHELADRLGVSYERFAAG 198 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K + E + + +Q +VD Y FV V+E R + D + ++ R++ G+ A Sbjct: 199 KYKDAGTALKEPSADEREYLQGLVDDYYDDFVERVAEGREMDPD-AIRDTEARVYLGSRA 257 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++GL+D +G +++V L A +D ++++ P +N Sbjct: 258 HELGLVDELGTRDDVLDRLAAR-LDVESVSVREFTPSEN 295 >gi|83310697|ref|YP_420961.1| periplasmic serine protease [Magnetospirillum magneticum AMB-1] gi|82945538|dbj|BAE50402.1| Periplasmic serine protease [Magnetospirillum magneticum AMB-1] Length = 582 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 11/234 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAA 108 SQ + E DD+ ++ + SPGGS A + + +++ K K V+ + AA Sbjct: 325 SQTVAEAFRDAVDDDAVKVILFRVDSPGGSYIASDTVHHEVERARKAGKKVVVSMGNYAA 384 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPS 165 S GY ++ ++ I+AA ++ GSIGV + F KLG+S + ++ M + Sbjct: 385 SGGYFVAMGADRIIAAPGTITGSIGVFTGKVVLDEFWKKLGISWDEMHRGDNAGMWSANQ 444 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 PFS +A + ++D Y F S +RN+ + L+ GRIWTGA+AK+ GL+D Sbjct: 445 PFSS---QAKARIDTLLDHIYADFTGKASAARNLDAARMDKLARGRIWTGADAKQSGLVD 501 Query: 226 VVGGQEEVWQSLYALG---VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 +GG E + +G VD+++ + ++ P+ W ++L S+ E I Sbjct: 502 GLGGWAEALSQVRQVGGLKVDETL-TLVEFPRPRKPWQVLAESLGGGSVAERRI 554 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 11/204 (5%) Query: 51 QELIERIERISRDDSATALIVSLS-SPGGSAYAGEAIFR-AIQKVK-NRKPVITEVHEMA 107 ++++E ++R + D + + +L SP G AG R A+ + + + KP + + Sbjct: 78 RQVVEALDRAAADSRVSGVFATLGHSPLG--LAGRQDLRDAVARFRASGKPAVLFAETLG 135 Query: 108 ASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 Y ++ A + + + VG G+ + P++K LD LG+ + K+ Sbjct: 136 EGGSGTLDYYLATAFSQVWLQPSGDVGLTGLWVESPFIKGTLDLLGIKAQFSGRHEYKSA 195 Query: 164 PSPFSEVN--PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 F+E P + + ++DS V ++ +R +P + L + +EA Sbjct: 196 IDMFTETGFTPAHRENLGRLLDSWSEQIVAGIAAARGLPEPQVRELMGKGPFLASEALAA 255 Query: 222 GLIDVVGGQEEVWQSLYALGVDQS 245 L+D VG ++E W + +G D++ Sbjct: 256 RLVDKVGYRDEAWGMIAGIGKDKA 279 >gi|157164394|ref|YP_001467221.1| signal peptide peptidase SppA, 36K type [Campylobacter concisus 13826] gi|157101431|gb|EAT99328.2| signal peptide peptidase SppA, 36K type [Campylobacter concisus 13826] Length = 287 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 102/193 (52%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P++ARI I G I D+ E+++ +E+ D + +++ + SPGG+ + A++++K Sbjct: 44 PNLARIDITGTIVDTSEILDELEKARLDSNIKGVLLYIDSPGGALSPSVELAMAVKRLKE 103 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 K V+ AS Y ++ I+A + +GSIGV+ Q ++ LGVS + V Sbjct: 104 SKKVLAYAAGNMASGSYYAGVNADAIIANPGAFIGSIGVIMQGANIENLAKNLGVSEQVV 163 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ K + + + + +Q +V+ +Y FV V+E+RN+ K ++ R++ Sbjct: 164 KAGEFKEAGTFMRSWSKQERESLQGLVNDAYMLFVSDVAEARNLDIKKKDEWANARVFLA 223 Query: 216 AEAKKVGLIDVVG 228 A K+GLID +G Sbjct: 224 HNALKMGLIDSLG 236 >gi|108798015|ref|YP_638212.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. MCS] gi|119867110|ref|YP_937062.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. KMS] gi|108768434|gb|ABG07156.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. MCS] gi|119693199|gb|ABL90272.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. KMS] Length = 593 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 7/171 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNII 121 D +A+++ + SPGGS E I+R + + + PV+ + +AAS GY +S ++ I Sbjct: 343 DKDVSAIVLRVESPGGSVTGSETIWREVLRTREGGTPVVASMGAVAASGGYYVSMGADAI 402 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMM 178 VA ++ GSIGV+ + D+LGV SV+++ + SPF++ V+ Sbjct: 403 VANPGTITGSIGVVTGKLVARELKDRLGVGSDSVRTNANADAWSANSPFTDEQQAHVEAE 462 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D+ Y FV V++ R + D+ ++ GR+WTGA+AK GL+D +GG Sbjct: 463 ADLF---YTDFVERVADGRGLSVDEVAEVARGRVWTGADAKDRGLVDELGG 510 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 2/192 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I R + DD LI + A + + AI +KP + + Sbjct: 65 RQVVAAIHRAADDDRVAGLIARVQISAAPAAPVQELREAIAAFGAKKPSVAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ A + + VG +G +++ LDK G+ + K+ + F++ Sbjct: 125 SYYLASAFREVWMQPSGTVGLVGFATSALFLRDALDKAGIQAQFTARGEYKSAANLFTQD 184 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + D +++S + V+ESR + D L+D A GL+D +G Sbjct: 185 SYTEPHREADSRLIESLNQQVLTAVAESRKLNPDDIDALADKAPLLRDAAVGGGLVDRIG 244 Query: 229 GQEEVWQSLYAL 240 ++E + + L Sbjct: 245 FRDEAYARVAEL 256 >gi|260220733|emb|CBA28590.1| hypothetical protein Csp_A07920 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 345 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 7/202 (3%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++PH A ++I G+I E ++ + D A A+++ ++SPGGS I Sbjct: 93 STPHTAVVSIHGEIASGNEASAEVVVASVRAAFEDQGAKAVVLLINSPGGSPVQAGIIND 152 Query: 89 AIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I ++K ++KPV V E ASA Y I+ A++ I + S+VGSIGVL ++ Sbjct: 153 EIHRLKALHKKPVYAVVEETCASAAYYIAVAADEIYVDKASIVGSIGVLMDGFGFTGLME 212 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS K Q ++D + F+ +V E R +T Sbjct: 213 KLGVERRLLTAGENKGFLDPFSPQTDKQRVFAQAMLDQIHQQFIGVVKEGRGKRLKETPD 272 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 + G WTG +A +GL D +G Sbjct: 273 MFSGLFWTGQQAIDLGLADKLG 294 >gi|315230248|ref|YP_004070684.1| protease IV [Thermococcus barophilus MP] gi|315183276|gb|ADT83461.1| protease IV [Thermococcus barophilus MP] Length = 338 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 109/193 (56%), Gaps = 3/193 (1%) Query: 38 VARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +A + I G I+++ L + +I +I ++S +++ + SPGG I++ ++K+ Sbjct: 96 IAILPIMGPIDENMALDVVSKIRQIKENESIGGVLLWIESPGGYVGPVRVIYKELKKLSY 155 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ A S GY I+CA++ I+A + VGSIGVL+ + ++ + + G+ + Sbjct: 156 SKPVVAYTGGYADSGGYFIACAADKIIADPLAEVGSIGVLYVHYDLEQYYAQNGIKVNVF 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ K + + ++ P+ +M+++++D+ + F+++VSE R++ + T + G+ W Sbjct: 216 KTGKYKDMGAEWRDLTPEEREMIKNIIDTYFQDFLQVVSEGRHLDMNTTKKYATGQTWFA 275 Query: 216 AEAKKVGLIDVVG 228 + K + L+D G Sbjct: 276 TDVKGI-LVDDTG 287 >gi|163761019|ref|ZP_02168097.1| proteinase sohB [Hoeflea phototrophica DFL-43] gi|162281800|gb|EDQ32093.1| proteinase sohB [Hoeflea phototrophica DFL-43] Length = 285 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 2/185 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 + R D A A+ + ++SPGGS I++ I+ + + K V+ V ++AAS GY+I Sbjct: 48 LARAFADKQAPAVAIMINSPGGSPVQSRLIYKRIRDLAEEKDKKVLMFVEDVAASGGYMI 107 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I+A +S+VGSIGV+ +DK+GV + + K+ PF NP+ Sbjct: 108 ACAGDEIIADPSSVVGSIGVISAGFGFTGLIDKIGVERRVYTAGENKSLLDPFKPENPED 167 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++++ + F+ LV +SR + GR WTG K++GL+D +G Sbjct: 168 IAYLKELQLDIHKVFIDLVKDSRGARLKDDPDMFTGRFWTGQRGKELGLVDDLGDLRATL 227 Query: 235 QSLYA 239 ++ Y Sbjct: 228 RARYG 232 >gi|258544038|ref|ZP_05704272.1| 36K family signal peptide peptidase SppA [Cardiobacterium hominis ATCC 15826] gi|258520666|gb|EEV89525.1| 36K family signal peptide peptidase SppA [Cardiobacterium hominis ATCC 15826] Length = 319 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H+A ++++G I ++ ++I +E+ ++ A A+I+ ++S GGS A++RA++ Sbjct: 64 HLAVVSVQGMIASDMEANADDIISGLEKAFKNPMAEAVILDINSGGGSPVQSGAVYRAVK 123 Query: 92 KVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K+ + PV + ++ AS Y I+ +++ I A S+VGSIGV+ + L KL Sbjct: 124 RLKSERSDLPVYAVIADVGASGAYYIAASADEIYADPASIVGSIGVISYGLGYRDLLGKL 183 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + + K + ++P V MQ ++D+ + F++ V + R +T + Sbjct: 184 GLDARVFTAGEHKNFLAGDKPLDPNEVAHMQALLDNMHAQFIKAVRDGRGERLKETPEMF 243 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 G WTG +A+ +GLID +G + + + Y Sbjct: 244 SGLFWTGEQAQPLGLIDALGDKNTLRNAKY 273 >gi|255532961|ref|YP_003093333.1| signal peptide peptidase SppA, 67K type [Pedobacter heparinus DSM 2366] gi|255345945|gb|ACU05271.1| signal peptide peptidase SppA, 67K type [Pedobacter heparinus DSM 2366] Length = 590 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 5/189 (2%) Query: 45 GQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 G D Q ERI + R D A+++ ++SPGGSA A + I+R I K KPVI Sbjct: 322 GDGSDHQIGSERISKAIRKARLDTDIKAVVLRVNSPGGSALASDVIWREIVLTKKIKPVI 381 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSP 159 ++AAS GY I+CA++ I ++ GSIGV P + K F DKLG++ VK+ Sbjct: 382 ASFGDVAASGGYYIACAADSIFVQPNTITGSIGVFGIIPNFQKLFNDKLGITFDGVKTGK 441 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 S + ++Q+ V+ Y F+ V++ R + GR+W G +A Sbjct: 442 YADIMSVDRPMTAGERLIVQNDVNRVYDSFITRVADGRKRTKAYIDSIGGGRVWVGTDAV 501 Query: 220 KVGLIDVVG 228 ++GL D G Sbjct: 502 RIGLADRTG 510 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 17/215 (7%) Query: 38 VARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 ++R+ + G ED ++I +++ DD+ + ++++SP AG A R I+ Sbjct: 68 LSRLPLVGSDEDKSIGFNDVIRALQKAKTDDNIKCVYINVTSP----QAGFATMREIRDA 123 Query: 94 -----KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K +I A YL S A I + E +L G+ + + K LDKL Sbjct: 124 LIDFKTSKKKIIAYSEVYTQGAYYLASAADKIYLNPEGALEFK-GLKSETMFFKGALDKL 182 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 G+ + V+ K+ PF +++ K + + + Y F+ +++SRNI + Sbjct: 183 GIEAQIVRVGNYKSAVEPFFAEKMSDKNREQVTAYLHGLYDTFLEGIAKSRNISTETLYQ 242 Query: 207 LSDG-RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++D +I +A ++D + ++++ L L Sbjct: 243 IADDYKIRQPQDAVAYKMVDELKYKDQIIDELKTL 277 >gi|237744193|ref|ZP_04574674.1| protease IV [Fusobacterium sp. 7_1] gi|229431422|gb|EEO41634.1| protease IV [Fusobacterium sp. 7_1] Length = 578 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E +E++ ++ A+++ ++SPGGSA + I I+++ + KPV + +AAS G Sbjct: 332 ETLEKLNIAKENNKIKAVVLRINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGG 391 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I ++ GSIGV+ P + GV+I+ + + E S + Sbjct: 392 YYISANADKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKIS----EGEYSDLYSSD 447 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +S+ Y F+ +VS++R I +K +++GRIWTG EA K+GL D +G Sbjct: 448 TFTEKKYNKIYNSNLKVYDDFLNVVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIG 507 Query: 229 GQEEVWQSLYALGVDQSI 246 G E ++Y + D + Sbjct: 508 GLNE---AIYGIAEDNDM 522 >gi|83718579|ref|YP_442246.1| peptidase, U7 family protein [Burkholderia thailandensis E264] gi|257138439|ref|ZP_05586701.1| peptidase, U7 family protein [Burkholderia thailandensis E264] gi|83652404|gb|ABC36467.1| peptidase, U7 family protein [Burkholderia thailandensis E264] Length = 333 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D S H A + I G+I +++++ Sbjct: 48 RIFFRFAFLAV--LGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTA 105 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 106 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 165 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 166 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFFDPFSPETPK 225 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 226 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDSV 285 Query: 234 WQSL 237 + + Sbjct: 286 ARDV 289 >gi|261867920|ref|YP_003255842.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413252|gb|ACX82623.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D11S-1] Length = 626 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAG 83 D +A + + G I D + + I + R + DD A+++ ++SPGGSA+A Sbjct: 323 DTKNKIAVVNVEGAIIDGETDEENVGGDTIANLLRKAYDDKDVKAVVLRVNSPGGSAFAS 382 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P + Sbjct: 383 EIIRQELSHLQQAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTFE 442 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GVS VK+S + A S F ++ + ++Q ++ Y F+ VS+ R++ Sbjct: 443 KTIKKIGVSADGVKTSDL-ALGSAFLPLSSELNDVLQLEIEHGYDEFLTKVSQGRHLSKA 501 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G++W G+EA + L+D +G Sbjct: 502 QVDKIAQGQVWLGSEAIEHKLVDELG 527 >gi|219886303|gb|ACL53526.1| unknown [Zea mays] Length = 565 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + + A+I+ + SPGG A A + ++R I+ + N KPV+ + ++AAS Sbjct: 289 AEQLIEKIRTVRESEKYKAVILRIDSPGGDALASDLMWREIRLLANSKPVVASMSDVAAS 348 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+ +IVA + +L GSIGV+ ++ +++ + K + S AE + + Sbjct: 349 GGYYMAMAAPVIVAEKLTLTGSIGVVTGKFCLQKLYERIDFN-KEIISKGRYAELNVNDQ 407 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ ++ GR+W+G +A GL+D V Sbjct: 408 RPLRPDEAELFEKSAQNAYALFRDKAAMSRSMSVDQMESVAQGRVWSGHDAFSRGLVDSV 467 Query: 228 GG 229 GG Sbjct: 468 GG 469 >gi|104780778|ref|YP_607276.1| peptidase SppA [Pseudomonas entomophila L48] gi|95109765|emb|CAK14470.1| putative peptidase SppA [Pseudomonas entomophila L48] Length = 327 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 12/236 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + ++ L + H A + +RG I D + +++ + Sbjct: 41 IFFKLLTFVYLFGMLALFTPLMDVDKAASRSGSHTALVEVRGVIADQEPASADNIVKSLR 100 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P I + ++ AS Y I+ Sbjct: 101 EAFKDSKTKAVVMRINSPGGSPVQAGYVYDEIRRLRGEYPAIKLYAVITDLGASGAYYIA 160 Query: 116 CASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A++ I A + SLVGSIGV Y +V + KLGV ++ + KA PFS P+ Sbjct: 161 SAADEIYADKASLVGSIGVTAAGYGFVGA-MGKLGVERRTYTAGEHKAFLDPFSPQKPEE 219 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q V+D+++ F+ +V + R + + L G IW+G +AK++GL+D +G Sbjct: 220 TAFWQGVLDTTHRQFIAVVKQGRGERLKDKEHPELFSGLIWSGEQAKELGLVDGLG 275 >gi|157375448|ref|YP_001474048.1| acid phosphatase [Shewanella sediminis HAW-EB3] gi|157317822|gb|ABV36920.1| Acid phosphatase [Shewanella sediminis HAW-EB3] Length = 612 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 5/186 (2%) Query: 45 GQIEDSQELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 GQI E ++ R +R D+ A+++ + SPGGSA+A E I + + +K KPV+ Sbjct: 344 GQI--GGESTSKLLRKARFDEQVKAVVLRVDSPGGSAFASEQIRQEVLALKTAGKPVVVS 401 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + AAS GY IS +++ I A T+L GSIG+ + L +G+ V +S A Sbjct: 402 MGSYAASGGYWISASADYIYATPTTLTGSIGIFGMVTTFEDSLSSIGIHTDGVATSDW-A 460 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S + P+ ++Q ++ YH F+ LV+ R + D ++ GR+W+G +A ++G Sbjct: 461 GISVTKGLTPEIKSVIQRHIERGYHDFISLVATERGMSLDDVDNIAQGRVWSGKKAVELG 520 Query: 223 LIDVVG 228 L+D +G Sbjct: 521 LVDELG 526 >gi|71907637|ref|YP_285224.1| peptidase S49 [Dechloromonas aromatica RCB] gi|71847258|gb|AAZ46754.1| Peptidase S49 [Dechloromonas aromatica RCB] Length = 320 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 10/234 (4%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSA 66 +V L +V + VV W + E H A + + G IE +++ L+ + + +A Sbjct: 44 FVYLLVVLIAVV--DWGAGAEHQERHTAMVNLTGVIEAKGEANAENLVAALNSAFDEKNA 101 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVA 123 +I+ ++SPGGS I I++++ + KP+ V +M AS GY ++ A++ I Sbjct: 102 VGIILRINSPGGSPVQAGIINDEIRRLRGKYPAKPLYAVVEDMCASGGYYVAAAADNIYV 161 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S+VGSIGVL +DK GV + + + K PFS P+ Q +++ Sbjct: 162 NKASIVGSIGVLMDGFGFTGTMDKAGVERRLLTAGENKGFLDPFSPQAPQHKAHAQLLLN 221 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + F+ +V R +T + G +WTGA++ ++GL D G + V + + Sbjct: 222 DIHKQFIDVVKAGRGKRLKETPEMFSGLMWTGAQSIQLGLADDFGSVDSVARDI 275 >gi|32490856|ref|NP_871110.1| protease 4 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166062|dbj|BAC24253.1| sppA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 615 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 14/180 (7%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLI 114 +I++ D + +L+V ++SPGGS A E I + KN KPV+ + +AAS GY I Sbjct: 353 QIKQARLDPNIKSLVVRINSPGGSVNASEIIRSELDATKNMGKPVVVSMGGIAASGGYWI 412 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPSPFS 168 S +N I++ +L GSIG+ ++ L+ +G+ V +SP+ K PS F Sbjct: 413 STPANYIISNPDTLTGSIGIFGIINTIESTLESIGIYSDGVSTSPLANINIAKKLPSEF- 471 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ M+ ++++ Y+ F+ LVS+SRN + + G +W G +A K GL+D +G Sbjct: 472 ------LEKMKLIIENGYYNFLSLVSKSRNKTIKEVDKIGQGHVWIGTDALKKGLVDKLG 525 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D++ T L++ L GS + I +A+++ K I + + + A Sbjct: 97 DIVYAIRKAKDDNNITGLVLYLKDFAGSDQTSLQYIGKALKEFKKTGKPIYSIGDNYSQA 156 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EPSPFS 168 Y ++ SNII +V G+ Y K FL KL ++ + K+ EP Sbjct: 157 QYFLASYSNIIYLNPQGMVDLHGISTNNFYYKTFLKKLKINTHVFRVGNYKSAVEPVLRD 216 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-----VLSDGRIWTGAEAK---K 220 ++ +A + + + + ++ ++S +RNI ++ +L +I G A+ K Sbjct: 217 NMSDEAKEDDKRWIQKLWRSYLNVISINRNIKIEEIFPNVKEILEKLKIVKGNTAEFALK 276 Query: 221 VGLIDVVGGQEEVWQSL 237 L+D + E+ + + Sbjct: 277 NNLVDKIESNPEIEKEM 293 >gi|72160983|ref|YP_288640.1| signal peptide peptidase A [Thermobifida fusca YX] gi|71914715|gb|AAZ54617.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Thermobifida fusca YX] Length = 569 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 7/174 (4%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFR-AIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 +D + A++ ++SPGGS A + I+R + + PV+ + ++A S GY I+ +++ Sbjct: 322 KDPNVRAVVFRVNSPGGSYTASDVIWREVVLTSQAGTPVVVSMGDVAGSGGYFIAAGADV 381 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFSEVNPKAVQM 177 I+A ++ GSIGV+ + L KLGV+ I S + M + PFSE + V Sbjct: 382 IIAQPGTITGSIGVVVGKAVLSTMLAKLGVTSDWIDSGNHAGMFSPNRPFSESEWERVNT 441 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 M D + Y FV V+E R + D+ ++ GRIWTG +A + GL+D VGG E Sbjct: 442 MLDHI---YDDFVGKVAEGRKMTRDQVHEVAKGRIWTGQDACERGLVDEVGGLE 492 >gi|332535711|ref|ZP_08411463.1| protease IV [Pseudoalteromonas haloplanktis ANT/505] gi|332034886|gb|EGI71415.1| protease IV [Pseudoalteromonas haloplanktis ANT/505] Length = 588 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 4/185 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 DS + R R+ DD A+++ + S GGS +A E I + +K KPVI + +A Sbjct: 314 DSTAALLRKARL--DDKVKAVVLRIDSGGGSMFASEVIRAEVLALKAAGKPVIASMSSVA 371 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY I+ A+N I AA +++ GSIGV + + L K+GV V ++ M A S Sbjct: 372 ASGGYWIASAANEIWAAPSTITGSIGVFGTFMTFEKTLSKIGVYSDGVATTEM-AGFSIT 430 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +N K Q++Q V+ +Y F+ +V+++RN+ ++ ++ GR+W ++A ++GL+D + Sbjct: 431 RPLNEKMGQVIQMNVEEAYGRFLNVVADARNMTPEQVDKIAQGRVWIASQALELGLVDKL 490 Query: 228 GGQEE 232 G +++ Sbjct: 491 GDKQD 495 >gi|332525765|ref|ZP_08401912.1| peptidase S49 [Rubrivivax benzoatilyticus JA2] gi|332109322|gb|EGJ10245.1| peptidase S49 [Rubrivivax benzoatilyticus JA2] Length = 331 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 14/255 (5%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + PH A + +RG+I E L+ + D A A+++ ++SPGGS + Sbjct: 79 SRPHTALVEVRGEIAPGSEASAELLVSALRSAFEDQGAQAVVLRINSPGGSPVQAGIVND 138 Query: 89 AIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++K ++K V V EM AS Y I+ A++ I + SLVGSIGVL +D Sbjct: 139 EIRRLKVLHQKKVYAVVEEMCASGAYYIAVAADEIYVDKASLVGSIGVLMDGFGFTGLMD 198 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ + + + K P+S N + + ++D + F+ +V + R +T Sbjct: 199 KLGIERRLLTAGENKGMLDPYSPQNEQQTAYAKAMIDQIHQQFIAVVRQGRGKRLQETPE 258 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 G W G EA ++GL D +G + V + + + D+ P +N K Sbjct: 259 TFSGLFWNGEEAVRLGLADKMGNLDYVAREVV------KAEDVVDYTPRENVAERLAKRF 312 Query: 267 SISSLLEDTIPLMKQ 281 +++ E + M+Q Sbjct: 313 G-AAMGEGAVKAMRQ 326 >gi|167581132|ref|ZP_02374006.1| peptidase, U7 family protein [Burkholderia thailandensis TXDOH] Length = 305 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D S H A + I G+I +++++ Sbjct: 20 RIFFRFAFLAV--LGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTA 77 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 78 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 137 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 138 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFFDPFSPETPK 197 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 198 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDSV 257 Query: 234 WQSL 237 + + Sbjct: 258 ARDV 261 >gi|288924896|ref|ZP_06418832.1| signal peptide peptidase SppA, 67K type [Prevotella buccae D17] gi|288338086|gb|EFC76436.1| signal peptide peptidase SppA, 67K type [Prevotella buccae D17] Length = 596 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 7/172 (4%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ ++S GG AYA E ++R ++ + +KPV+ + MAAS Y +S + +VA T+ Sbjct: 347 AVVLRINSGGGDAYASEQLWRQVKLLNAKKPVVVSMSGMAASGAYYMSMGARWLVAQPTT 406 Query: 128 LVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV------NPKAVQMMQD 180 L GSIG+ P + + + KLG+ K++ M P V N +Q+ Sbjct: 407 LTGSIGIFACLPDFSELYNQKLGIRFDEEKTNEMATFSYPIGMVPMARHFNATEATAIQN 466 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V+ Y F + V+E R + + ++ GR+W G +A ++ LID +GG EE Sbjct: 467 YVNRGYVLFRQRVAEGRKMKTAQVEDVAQGRVWLGTDALRLKLIDQLGGLEE 518 >gi|238020513|ref|ZP_04600939.1| hypothetical protein GCWU000324_00395 [Kingella oralis ATCC 51147] gi|237867493|gb|EEP68499.1| hypothetical protein GCWU000324_00395 [Kingella oralis ATCC 51147] Length = 333 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 11/204 (5%) Query: 36 PHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 PH A + ++G I + E L E +E ++++ A+++ +SPGGS F Sbjct: 81 PHTAVVNLKGVIGGNDEHDQVKILREGMEAAYKNNNVKAILLRANSPGGSPVVSNIAFEE 140 Query: 90 IQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++K PV ++ AS Y I+ A++ I A +SL+GSIGV+ V + Sbjct: 141 IRRMKREHADIPVYVVAEDVCASGCYYIAAAADKIYADPSSLMGSIGVIGSSFDVTELMQ 200 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+GV + + K PF+ +P+ + Q ++D + F++ V E RN ++ Sbjct: 201 KIGVKRRVRIAGDNKGMGDPFTPESPEQQAIFQQMLDQVHAEFIKSVREGRNGKLNEKAY 260 Query: 207 --LSDGRIWTGAEAKKVGLIDVVG 228 L GR++TG EAKK GL+D +G Sbjct: 261 PDLFSGRVFTGIEAKKAGLVDDLG 284 >gi|37526445|ref|NP_929789.1| protease 4 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785876|emb|CAE14927.1| protease IV (endopeptidase IV) (signal peptide peptidase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 621 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 109/202 (53%), Gaps = 11/202 (5%) Query: 37 HVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A I +G I D Q+ +I + DD+ A+I+ ++SPGGS A + I Sbjct: 330 NIAVIVAQGAIVDGQQTQGMVGGDTTAAQIRQARLDDNIKAVILRVNSPGGSVSASDVIR 389 Query: 88 RAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++ KPV+ + MAAS GY I+ +N I+A +++L GSIG+ + L+ Sbjct: 390 TELAALRATNKPVVVSMGGMAASGGYWIATPANYIIANQSTLTGSIGIFGVITTYENSLE 449 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +G+ V ++P+ A S ++ + +MQ +++ Y+ F+ LV+ SR+ ++ Sbjct: 450 HIGIHTDGVSTTPL-AGISVTKGLSKEFSALMQLNIENGYNNFIGLVATSRHKTREEVDN 508 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 ++ G +W G +AK GL+D +G Sbjct: 509 IAQGHVWIGHDAKTNGLVDQLG 530 >gi|329851486|ref|ZP_08266243.1| signal peptide peptidase SppA, 67K type [Asticcacaulis biprosthecum C19] gi|328840332|gb|EGF89904.1| signal peptide peptidase SppA, 67K type [Asticcacaulis biprosthecum C19] Length = 593 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 11/211 (5%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 +D A++ +SSPGGS A I A++ K KPV+ + + AAS GY I+ ++ Sbjct: 332 KDPKVKAIVFRVSSPGGSDTASAQIAEAMKDAKEAGKPVVVSMGDYAASGGYWIASGASA 391 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV---NPKAVQM 177 IVA ++L GSIGV + L + GV IK + E FSE +P Sbjct: 392 IVANPSTLTGSIGVFGGKFAIGDALARFGVDIKDIHVGGDYTEV--FSEAKGFSPTQRAA 449 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG---QEEVW 234 + +D Y+ F+ V+ RN+P DK L+ GR+WTGA+A + L+D GG + Sbjct: 450 LSSWIDQIYNSFITHVAAGRNLPEDKVRELAKGRVWTGAQAVEHRLVDKAGGFYAAVDTA 509 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 +SL + +R ++ P K F + N Sbjct: 510 KSLAKIDASAQVRLVR--YPSKPSMFGGVSN 538 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 11/220 (5%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVIT 101 + G + E++ + R + D A+ + L G S A E I AI V+ KPVI Sbjct: 64 LTGSTLSTVEVVTTLHRAADDPKVKAVFMRLPEGGMSPAAAEEIREAIIYVRRASKPVIA 123 Query: 102 EVHEMAAS----AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + S + Y++ +S+ + S G+ + K DK G+S + + Sbjct: 124 HSQGLYPSGMVISSYMLGASSSELWMQPRSSFQVTGISSSEMFFKDAFDKYGISAQYEQR 183 Query: 158 SPMKAEPSP--FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--DGRIW 213 + K +P +++ P+ + + S Y + ++ R + DKT+V + + + Sbjct: 184 AEFKNAVNPYLYNDFTPEHREATLSWMGSIYQSMIGNIASDRRL--DKTVVQTTLEAGPY 241 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +A ++GLI +G + Q+ G + + + D++ Sbjct: 242 GAEKALELGLITHLGQVHDAEQAALKRGTNAKVMSLADYS 281 >gi|300728472|ref|ZP_07061832.1| signal peptide peptidase SppA, 67K type [Prevotella bryantii B14] gi|299774273|gb|EFI70905.1| signal peptide peptidase SppA, 67K type [Prevotella bryantii B14] Length = 593 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 18/219 (8%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + +E ++ DD A+++ ++S GG AYA E I+ ++K+ +KPV+ + MAAS Sbjct: 328 ASKVCKDLEDMANDDRIKAVVLRINSGGGDAYASEQIWHYVKKLNAQKPVVVSMSGMAAS 387 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA----EP 164 Y +S + IVA T+ GSIG+ P + KLG+ + ++ P Sbjct: 388 GAYYMSMGARWIVAQPTTETGSIGIFAAIPDFSGLMTQKLGIKFDEIGTNKNSTFSMNNP 447 Query: 165 SPFSE-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 P + N + +Q VD Y F + V++ R + ++ ++ G ++ G +A K+ L Sbjct: 448 IPMARPYNEDEAKALQRYVDRGYDLFCQRVADGRKLSVNQVHEVAQGHVFLGTDAIKLKL 507 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 +D +G +D +I+K + KNY+ D Sbjct: 508 VDQLG------------SMDDAIQKAASFAKLKNYYTVD 534 >gi|162456619|ref|YP_001618986.1| protease IV [Sorangium cellulosum 'So ce 56'] gi|161167201|emb|CAN98506.1| Protease IV [Sorangium cellulosum 'So ce 56'] Length = 896 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 91/185 (49%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + R D S A+++ + + GGS A + I R KP++ + AAS GY S Sbjct: 612 LRRAREDQSVRAVVLRVETGGGSTLAADVILREAILTARVKPLVVSMGSSAASGGYYASV 671 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A I A+ +S+ GSIGV + V L KLGVSI++ +SSP S + + Sbjct: 672 AGAPIFASRSSITGSIGVFYGKVDVTGLLQKLGVSIETFRSSPRADAESLYRPYTDDERE 731 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + V Y FV + E+R++ ++ L G++WTGA+A + LID +GG + Sbjct: 732 QLGVKVKQFYDRFVARIVENRHMKAEEVDALGRGQVWTGAQALERRLIDRLGGLRQAIAE 791 Query: 237 LYALG 241 LG Sbjct: 792 ARRLG 796 >gi|268323790|emb|CBH37378.1| putative protease, peptidase S49 family [uncultured archaeon] Length = 251 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 2/187 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + S LI+ IE A+I ++SPGG+ +A + I I+K+ KP I V Sbjct: 29 GLMAASTVLIKDIEEAENKRKIKAVIFEINSPGGTPFASKEIATCIEKMD--KPAIAWVR 86 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E AAS Y I+ A + IVA E S VGSIG + P + + K G+ I+++++ K Sbjct: 87 EYAASGAYWIASACDEIVADELSTVGSIGAMSIRPDIGELMKKFGIDIETLRTGSYKGLG 146 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 P+ + + ++++ +D F+ V+++R + K LS +++ G EAK +GLI Sbjct: 147 LPYEKPTEEERELLKKELDEIQDNFLNAVAKNRKLDDAKMKELSSAKVYLGREAKDMGLI 206 Query: 225 DVVGGQE 231 D +GG+E Sbjct: 207 DHLGGKE 213 >gi|116749395|ref|YP_846082.1| signal peptide peptidase SppA, 36K type [Syntrophobacter fumaroxidans MPOB] gi|116698459|gb|ABK17647.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Syntrophobacter fumaroxidans MPOB] Length = 329 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 2/180 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAA 108 QE++ ++++ +D + A+++ + S GGS A + ++ I + K R ++ + AA Sbjct: 74 QEIVSQLKKAEKDKTVKAVLLKVDSSGGSVSASDILYHEIMEFKRRSGAKLVAVLMGTAA 133 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY I+ ++ IVA +++ GS+GV+F P V +DK+G+ ++ KS K SPF Sbjct: 134 SGGYYIALPADSIVAHPSTITGSVGVIFIRPKVTGLMDKIGLEVEVDKSGRNKDMGSPFR 193 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + Q++Q ++D F+ L R + +S R++ EA ++GL+D VG Sbjct: 194 KTTAEEQQILQHLIDELARKFIDLTVAHRRLEPAALADVSTARVYLAEEALRLGLVDKVG 253 >gi|116331019|ref|YP_800737.1| Signal peptide peptidase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124708|gb|ABJ75979.1| Signal peptide peptidase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 583 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 10/184 (5%) Query: 62 RDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 RD+S+ A+++ + SPGGSA+ E +++ I K++ +KPV V ++AS GY +SC ++ Sbjct: 325 RDESSVKAVVLEVDSPGGSAFVSELLYQEILKLQKKKPVYAYVQNVSASGGYYLSCGASK 384 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A+ +VGSIG L +K F KLGV+ V + S + ++P++ ++M+ Sbjct: 385 IYASPYGIVGSIGSLSLRLDLKNFYSKLGVTKDRVGFYKYRDLLSEYGPIHPESRKLMRQ 444 Query: 181 VVDSSYHWFVRLVSESRNIP---YDKTLVLSDGRIWTGAEAKKVGLI----DVVGGQEEV 233 + S F + V+++R IP DK GR++T + K +I D +G E++ Sbjct: 445 EIKESEGLFYKRVADARKIPISTLDKR--FGQGRVFTSSRFLKEKMIDSITDFLGLLEDI 502 Query: 234 WQSL 237 Q L Sbjct: 503 KQEL 506 >gi|116328293|ref|YP_798013.1| Signal peptide peptidase (protease IV) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121037|gb|ABJ79080.1| Signal peptide peptidase (protease IV) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 582 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 10/184 (5%) Query: 62 RDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 RD+S+ A+++ + SPGGSA+ E +++ I K++ +KPV V ++AS GY +SC ++ Sbjct: 325 RDESSVKAVVLEVDSPGGSAFVSELLYQEILKLQKKKPVYAYVQNVSASGGYYLSCGASK 384 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A+ +VGSIG L +K F KLGV+ V + S + ++P++ ++M+ Sbjct: 385 IYASPYGIVGSIGSLSLRLDLKNFYSKLGVTKDRVGFYKYRDLLSEYGPIHPESRKLMRQ 444 Query: 181 VVDSSYHWFVRLVSESRNIP---YDKTLVLSDGRIWTGAEAKKVGLI----DVVGGQEEV 233 + S F + V+++R IP DK GR++T + K +I D +G E++ Sbjct: 445 EIKESEGLFYKRVADARKIPISTLDKR--FGQGRVFTSSRFLKEKMIDSITDFLGLLEDI 502 Query: 234 WQSL 237 Q L Sbjct: 503 KQEL 506 >gi|125583549|gb|EAZ24480.1| hypothetical protein OsJ_08238 [Oryza sativa Japonica Group] Length = 684 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + + A+I+ + SPGG A A + ++R I+ + + KPV+ + ++AAS Sbjct: 408 AEQLIEKIRTVRESEKYKAVILRIDSPGGDALASDLMWREIRLLADTKPVVASMSDVAAS 467 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+ +IVA + +L GSIGV+ ++ +++ + K + S AE + + Sbjct: 468 GGYYMAMAAPVIVAEKLTLTGSIGVVTGKFILQKLYERIDFN-KEIISKGRYAELNAADQ 526 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ ++ GR+W+G +A GL+D + Sbjct: 527 RPLRPDEAELFEKSAQNAYALFRDKAAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSL 586 Query: 228 GG 229 GG Sbjct: 587 GG 588 >gi|15602536|ref|NP_245608.1| hypothetical protein PM0671 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720949|gb|AAK02755.1| SppA [Pasteurella multocida subsp. multocida str. Pm70] Length = 627 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 11/207 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYA 82 E+ +A + + G I D + + I R+ R + DD + A+I+ ++SPGGSA+A Sbjct: 324 EEGQYKIAVVNVEGAIIDGESDEHEVGGDTIARLLRQAHDDDNVKAVILRVNSPGGSAFA 383 Query: 83 GEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + ++ KPV+ + MAAS GY IS ++ I+A + ++ GSIG+ +P Sbjct: 384 SEIIRQEVDNLQALGKPVVVSMGAMAASGGYWISSTADYIIADKNTITGSIGIFALFPTF 443 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L K+G+S V +S + + + + ++Q ++S Y F+ +VS R + Sbjct: 444 EKTLKKVGISADGVSTSALSSSSRFSGLSSEMS-DILQLEIESGYDKFLSVVSRGRGMTV 502 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ ++ G+IW G EA K L+D +G Sbjct: 503 EEVDKVAQGKIWLGEEAVKHNLVDELG 529 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 12/185 (6%) Query: 26 SWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS-PGGSAYAG 83 SW +++ ++ HV R QI + +++ I+ +DD + L++ L+ G A Sbjct: 77 SWQKALKELDNQHVPR-----QIS-TFDIVYMIDHAKKDDRISGLVLDLNFFEGADLPAL 130 Query: 84 EAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E + + I K ++KPVI + S YL++ ++ I V G+ + Y K Sbjct: 131 EYVGQTINAFKESQKPVIAFADNLGQSQ-YLLASYADEIYINPIGQVDITGLRQENLYFK 189 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L+ L V+ + K+ PF ++P+A + + + + +H + ++V+++R I Sbjct: 190 SMLENLDVTAHIFRVGTYKSAVEPFLRDNMSPEAKTDLSEWLGAMWHNYKQIVAKNRQID 249 Query: 201 YDKTL 205 D L Sbjct: 250 PDDVL 254 >gi|85713271|ref|ZP_01044295.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] gi|85692915|gb|EAQ30889.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] Length = 562 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 13/245 (5%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAY 81 E +A + RGQI + + I + D+ A+++ + SPGGS + Sbjct: 267 AESKKDQIAVVVARGQIVNGTQRAGMIGGDSTAALLRKAGEDERTKAVVLRIDSPGGSGF 326 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + I ++K + PVI + +AAS GY I+ ++ I AA T++ GSIGV Sbjct: 327 ASEIIRQEILQLKEKGIPVIASMSSVAASGGYWIAAEADEIWAAPTTITGSIGVFGLVMT 386 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 ++ +GV SV ++ +++ + ++ +++Q ++ Y +F+ +V+E+RN+ Sbjct: 387 LEDSAAAIGVHSDSVSTTEIES-LNTLEGISDSQARILQRSTENFYQFFITMVAEARNMT 445 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--VDQSIRKIKDWNPPKNY 258 + ++ GRIWTG +A + GL+D +G ++ Q+ D ++ I P+ Sbjct: 446 PEAVDDVAQGRIWTGRQALERGLVDNLGDFDDAIQAAAKRADLNDYTVNTITQDLSPQQQ 505 Query: 259 WFCDL 263 +F +L Sbjct: 506 FFANL 510 >gi|125540982|gb|EAY87377.1| hypothetical protein OsI_08780 [Oryza sativa Indica Group] Length = 684 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + + A+I+ + SPGG A A + ++R I+ + + KPV+ + ++AAS Sbjct: 408 AEQLIEKIRTVRESEKYKAVILRIDSPGGDALASDLMWREIRLLADTKPVVASMSDVAAS 467 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+ +IVA + +L GSIGV+ ++ +++ + K + S AE + + Sbjct: 468 GGYYMAMAAPVIVAEKLTLTGSIGVVTGKFILQKLYERIDFN-KEIISKGRYAELNAADQ 526 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ ++ GR+W+G +A GL+D + Sbjct: 527 RPLRPDEAELFEKSAQNAYALFRDKAAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSL 586 Query: 228 GG 229 GG Sbjct: 587 GG 588 >gi|91203949|emb|CAJ71602.1| similar to signal peptide peptidase [Candidatus Kuenenia stuttgartiensis] Length = 328 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 106/189 (56%), Gaps = 13/189 (6%) Query: 53 LIERIERISR----------DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVI 100 L E ++ +SR D A+++ ++SPGG A + ++ I + K +K VI Sbjct: 71 LTEELDMVSRVKEELTLAKMDKQVKAILLRINSPGGKVTASDMMYYEIMRFKEETKKKVI 130 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + ++ AS GY ++ +++ I+A T++ GSIGV+ ++ L K+G++ SVK+ Sbjct: 131 ACIMDIGASGGYYVAASADKIIAHPTTVTGSIGVIMINLSIEGLLQKVGIADASVKTGEH 190 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAK 219 K SP ++ + ++ +++++ Y F+ ++ E+R I +K L+DGRI++ +A Sbjct: 191 KDMGSPLKKMTEEDRRIFSEILNAMYERFLCVIEENREGISMEKIRELADGRIYSAQQAL 250 Query: 220 KVGLIDVVG 228 + GLID +G Sbjct: 251 ENGLIDQIG 259 >gi|330798433|ref|XP_003287257.1| hypothetical protein DICPUDRAFT_78124 [Dictyostelium purpureum] gi|325082717|gb|EGC36190.1| hypothetical protein DICPUDRAFT_78124 [Dictyostelium purpureum] Length = 639 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 6/193 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S L+ I +D A+I+ ++S GGS A + + I+ K K ++ + A Sbjct: 344 SDSLVLAIRSAVQDKDVKAIILRVNSGGGSYIASDLVHHEIEAAKKAGKKIVVSMGTYCA 403 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP--MKAEPSP 166 S GY I+C ++ I+A +L GSIGVL ++P K+GV+ ++ +P K + Sbjct: 404 SGGYFIACNADKIIALGATLTGSIGVLTAKFNLQPMWKKIGVTFDDLRLNPDGTKDNATY 463 Query: 167 FSEV---NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 FS + N K + + + +D Y F VS+ R + D+ ++ GR+WTG++A GL Sbjct: 464 FSSLHNYNEKQLSDVNNYLDFIYEDFTSKVSKGRRLTRDQVEEIARGRVWTGSQALDNGL 523 Query: 224 IDVVGGQEEVWQS 236 +D +GG +E ++ Sbjct: 524 VDKIGGIKEAIEA 536 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 12/198 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR----AIQKVKNRKPVITEVHEM 106 ++++E +E+ S D LIV L + + FR A +K R V T+ Sbjct: 89 KDILESLEKASTDKKIIGLIVKLGGENQLSLSNIQEFRNAVQAFKKSGKRAVVFTDSFTE 148 Query: 107 AAS--AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 S A Y ++ A + + V I + + +VK L+KLGV ++ K+ Sbjct: 149 VGSGIARYYLASAFTDVYMSPAGTVNLINSQYDFAFVKGTLEKLGVVPDALTRKEYKSAL 208 Query: 165 SPFSEVNPKAVQM----MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 + S +N K + M + S Y + +S+ R + D+ L + ++ +A Sbjct: 209 N--SLINEKLTEAEKESMNAIFKSLYDQIILDISKDRGLTVDQVNGLFETGPFSADKALV 266 Query: 221 VGLIDVVGGQEEVWQSLY 238 LID +EV+ + Y Sbjct: 267 NKLIDATLYSDEVYTTTY 284 >gi|290980063|ref|XP_002672752.1| predicted protein [Naegleria gruberi] gi|284086331|gb|EFC40008.1| predicted protein [Naegleria gruberi] Length = 660 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 114/234 (48%), Gaps = 14/234 (5%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEM 106 +S +++ I + +D +++ + SPGG A E I R I+ + +++K V+ + + Sbjct: 367 NSNVIVDAIYKARKDKEVKVILIRVDSPGGEVSASEVIRREIELARTEDKKKVVISMGGL 426 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD-KLGVSIKSVKSSPMKAEPS 165 AAS GY IS + IV ++ GSIGV+ Y+ F KLGV+ SV +S S Sbjct: 427 AASGGYWISLPGDKIVCNPFTITGSIGVIMGKLYLGDFFSKKLGVTNDSVSTSKNAGLLS 486 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLI 224 F N + +++ ++ D Y F+ VSE RNI D ++ G+++ G AK + L+ Sbjct: 487 QFERANDQQMEIFNNLADDFYDSFLEKVSERRNISKDDLKNNIAKGKVYLGNSAKALNLV 546 Query: 225 DVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 D VG Y AL V + + +K N P F K I SLL P Sbjct: 547 DSVG-------DFYDALQVAKELAGMK--NEPHIVVFHPKKKSVIESLLNTQSP 591 >gi|254448114|ref|ZP_05061577.1| peptidase S49 [gamma proteobacterium HTCC5015] gi|198262240|gb|EDY86522.1| peptidase S49 [gamma proteobacterium HTCC5015] Length = 318 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 18/242 (7%) Query: 14 MLSLVTLTVVYF----SWSSHVEDN---SPHVARIAIRGQIEDSQE-----LIERIERIS 61 ML+L+ LTV+ +W + N HVA + + G I + L+ + Sbjct: 37 MLTLLYLTVLILVSSGAWQFSGKSNPIKGEHVAVVQVNGIIAPDSDASADMLVPAMRDAM 96 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCAS 118 +++A AL++ ++SPGGS E ++ I ++++ KPV + ++ AS Y I+ A+ Sbjct: 97 ENENAKALLLRINSPGGSPVQSELVYSEILRLRSEYPEKPVYAVIEDIGASGAYYIASAA 156 Query: 119 NIIVAAETSLVGSIGVL--FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 I A E+S+VGSIGV + +VK L+KLGV + S KA PF + ++ Sbjct: 157 ENIYAIESSIVGSIGVTSGGSFGFVKA-LEKLGVERRIYTSGENKAFLDPFLPEKQQDIE 215 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + +++S + F++ V++ R L G +WTG E+ ++GLID G + + Sbjct: 216 RYESMLNSVHQQFIKAVTDERGERLKDDGELFSGYVWTGEESLELGLIDGFGDMRGIARE 275 Query: 237 LY 238 ++ Sbjct: 276 MF 277 >gi|325660920|ref|ZP_08149547.1| hypothetical protein HMPREF0490_00279 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472427|gb|EGC75638.1| hypothetical protein HMPREF0490_00279 [Lachnospiraceae bacterium 4_1_37FAA] Length = 339 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 21/209 (10%) Query: 36 PHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSPGGSA 80 P++ +A+ G I++ ++ I+R+ D+ +++ + SPGG+ Sbjct: 67 PYIGIVAVEGTIQEQTSSNGIFDTVAGYQHDTTLDYIDRMMEDEKNQGILLRVDSPGGTV 126 Query: 81 YAGEAIFRAI--QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y E ++R + K + +PV T + AAS GY IS S+ I A + GSIGV+ Sbjct: 127 YESEELYRKLVAYKEETGRPVWTYMEHYAASGGYYISAPSDKIYANPNTTTGSIGVIMSG 186 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +KLG+ S+ S K S++ + + + Q VD S+ FV +V++ R Sbjct: 187 YDMSGLYEKLGIRSVSITSGKNK----DMSKLTEEQIAIYQSSVDESFDRFVEIVADGRK 242 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + ++DGR +T +AK GLID + Sbjct: 243 MTEETVREIADGRTYTAKQAKANGLIDEI 271 >gi|115448437|ref|NP_001047998.1| Os02g0728100 [Oryza sativa Japonica Group] gi|46390611|dbj|BAD16095.1| putative protease IV [Oryza sativa Japonica Group] gi|113537529|dbj|BAF09912.1| Os02g0728100 [Oryza sativa Japonica Group] Length = 674 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + + A+I+ + SPGG A A + ++R I+ + + KPV+ + ++AAS Sbjct: 398 AEQLIEKIRTVRESEKYKAVILRIDSPGGDALASDLMWREIRLLADTKPVVASMSDVAAS 457 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+ +IVA + +L GSIGV+ ++ +++ + K + S AE + + Sbjct: 458 GGYYMAMAAPVIVAEKLTLTGSIGVVTGKFILQKLYERIDFN-KEIISKGRYAELNAADQ 516 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ ++ GR+W+G +A GL+D + Sbjct: 517 RPLRPDEAELFEKSAQNAYALFRDKAAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSL 576 Query: 228 GG 229 GG Sbjct: 577 GG 578 >gi|116073506|ref|ZP_01470768.1| Periplasmic serine protease (ClpP class) [Synechococcus sp. RS9916] gi|116068811|gb|EAU74563.1| Periplasmic serine protease (ClpP class) [Synechococcus sp. RS9916] Length = 269 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 1/222 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ + I A+ +++ + V+ ++AS G I A+ IV+ Sbjct: 44 ALLLRIDSPGGTVGDSQEIHAALLRLREKGCHVVASFGNISASGGVYIGVAAEKIVSNPG 103 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + GSIGV+ + + L+++G+ ++VKS K SP ++ +++Q ++DSSY Sbjct: 104 CITGSIGVILRGNNLSKLLERVGIRFETVKSGAYKDILSPDRALSADERELLQALIDSSY 163 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV V+E R + D +DGR+++GA+ K++GL+D +G +E L Sbjct: 164 AQFVDAVAEGRGLSPDTVRKFADGRVFSGAQGKELGLVDELGDEERARALAAELADLDED 223 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 K PK L S+ + L + + Q LW Sbjct: 224 CKPITLGKPKKKLLASLPGSSVVARLAEMLETELSHSGQALW 265 >gi|226496121|ref|NP_001146232.1| hypothetical protein LOC100279804 [Zea mays] gi|224028317|gb|ACN33234.1| unknown [Zea mays] Length = 672 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++LIE+I + + A+I+ + SPGG A A + ++R I+ + N KPV+ + ++AAS Sbjct: 396 AEQLIEKIRTVRESEKYKAVILRIDSPGGDALASDLMWREIRLLANSKPVVASMSDVAAS 455 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+ +IVA + +L GSIGV+ ++ +++ + K + S AE + + Sbjct: 456 GGYYMAMAAPVIVAEKLTLTGSIGVVTGKFCLQKLYERIDFN-KEIISKGRYAELNVNDQ 514 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ ++ GR+W+G +A GL+D V Sbjct: 515 RPLRPDEAELFEKSAQNAYALFRDKAAMSRSMSVDQMESVAQGRVWSGHDAFSRGLVDSV 574 Query: 228 GG 229 GG Sbjct: 575 GG 576 >gi|120598749|ref|YP_963323.1| signal peptide peptidase SppA, 67K type [Shewanella sp. W3-18-1] gi|146293174|ref|YP_001183598.1| signal peptide peptidase SppA, 67K type [Shewanella putrefaciens CN-32] gi|120558842|gb|ABM24769.1| signal peptide peptidase SppA, 67K type [Shewanella sp. W3-18-1] gi|145564864|gb|ABP75799.1| signal peptide peptidase SppA, 67K type [Shewanella putrefaciens CN-32] gi|319426314|gb|ADV54388.1| signal peptide peptidase SppA, 67K type [Shewanella putrefaciens 200] Length = 615 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 2/179 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + + D AL++ + SPGGSA+A E I + + +K KPV+ + +AAS GY Sbjct: 353 ELLRKARFDKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSMGSLAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + LD +G+ V +S A S ++ Sbjct: 413 ISASADYIFATPTTLTGSIGIFGMITTFEDSLDSIGIHTDGVSTSEW-AGLSVTRTLSSS 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++Q ++ Y F+ LV++ RN+ ++ ++ GR+W+G +A ++GL+D +G +E Sbjct: 472 VEAVIQRHIERGYLNFISLVAKERNMTLEQVDSIAQGRVWSGKKALELGLVDELGDIDE 530 >gi|78776884|ref|YP_393199.1| peptidase S49, SppA [Sulfurimonas denitrificans DSM 1251] gi|78497424|gb|ABB43964.1| Peptidase S49, SppA [Sulfurimonas denitrificans DSM 1251] Length = 289 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 116/226 (51%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F +K I+ + + V + + F+ S + ++ +I + G I + E++++I+ + Sbjct: 13 FTMKFIQEHFKAMIFVLILFLIFAPQSKEDLKPNNLEQINLVGPIMEVSEVLKQIDDAAA 72 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + +++++ SPGG+ I AI++ + KPVI AS Y S ++ I+ Sbjct: 73 NHFVKGILLNVDSPGGAVAPSIEIAYAIKRARESKPVIVYASGTIASGSYYASIWADEII 132 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A S+VGSIGV+ Q V + K+G+ +SV++ K + E + V+ Sbjct: 133 ANPGSMVGSIGVIMQGADVSELMSKIGIKSQSVQAGKYKKVGASDREWTEYEKNELNKVI 192 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Y F + V+++R + +K ++ I+T ++AK+VGL+D +G Sbjct: 193 QGTYELFTKDVADARGLDINKRDFYANAHIFTASQAKEVGLVDTLG 238 >gi|329768602|ref|ZP_08260088.1| hypothetical protein HMPREF0428_01785 [Gemella haemolysans M341] gi|328836476|gb|EGF86137.1| hypothetical protein HMPREF0428_01785 [Gemella haemolysans M341] Length = 327 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ-------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 D+S + +I+I G+I ++ +I+ + + A+++S++SPGG Y Sbjct: 64 DSSQVIQKISIEGEINSEMTNTYSRGSVLNQIKEAKGNPNVKAILLSVNSPGGGVYETAE 123 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISC-ASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ A++ + K V + + AAS GY +S A I V ET+ GS+GV+ Y + F Sbjct: 124 LYNALKN--SGKDVYVSMKKTAASGGYYVSTPAKKIFVNTETT-TGSLGVIMSYVSAQKF 180 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ G+ ++V+S KA ++ +++Q+ +Y FV+ ++E R++ D+ Sbjct: 181 LNDHGIKQETVRSGDQKAVGGLTEDLPESTRKILQEQNKEAYERFVKAIAEGRHLSEDEV 240 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 L+DGR +TG +A L D +G ++E+ Sbjct: 241 KKLADGRTYTGTQAVANKLADKIGTEDEL 269 >gi|313681597|ref|YP_004059335.1| signal peptide peptidase sppa, 36k type [Sulfuricurvum kujiense DSM 16994] gi|313154457|gb|ADR33135.1| signal peptide peptidase SppA, 36K type [Sulfuricurvum kujiense DSM 16994] Length = 290 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQELIERIERISRD 63 LK I+ + LV L V++ S +PH + +IA+ G I D+ ++ +I+ + Sbjct: 16 LKFIQEHFKATVLV-LIVLWLIIPSSENGITPHNLQKIALSGPILDATPIVAQIDEAREN 74 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D ++ S+ SPGG+ I AI+++ KP + + AS GY N I+A Sbjct: 75 DGIKGVLFSIDSPGGAVAPSVEIAYAIKRLSETKPTVVYAAGIMASGGYYSGIWGNEIIA 134 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S++GSIGV+ + + ++K+GV + V + K + E + + V+D Sbjct: 135 NPGSMIGSIGVIMEGADISGLMEKVGVKTQVVHAGTYKQVGTFDREWSAAERAELNKVID 194 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +Y FV V+ +R + ++ +D I+T +AKK GL+D +G + + + + Sbjct: 195 GTYSMFVVDVARARKLDPLRSGEYADAHIFTALQAKKAGLVDSIGVEYDAKKRV------ 248 Query: 244 QSIRKIKD--WNP--PKNYWF 260 + + K+KD WN P + +F Sbjct: 249 EELSKVKDPTWNKEDPMDRFF 269 >gi|331085365|ref|ZP_08334451.1| hypothetical protein HMPREF0987_00754 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408148|gb|EGG87638.1| hypothetical protein HMPREF0987_00754 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 329 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 21/209 (10%) Query: 36 PHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSPGGSA 80 P++ +A+ G I++ ++ I+R+ D+ +++ + SPGG+ Sbjct: 57 PYIGIVAVEGTIQEQTSSDSIFDTVAGYQHDITLDYIDRMMEDEKNQGILLRVDSPGGTV 116 Query: 81 YAGEAIFRAI--QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y E ++R + K + +PV T + AAS GY IS S+ I A + GSIGV+ Sbjct: 117 YESEELYRKLVAYKEETGRPVWTYMEHYAASGGYYISAPSDKIYANPNTTTGSIGVIMSG 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +KLG+ S+ S K S++ + + + Q VD S+ FV +V++ R Sbjct: 177 YDMSGLYEKLGIRSVSITSGKNK----DMSKLTEEQIAIYQSSVDESFDRFVEIVADGRK 232 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + ++DGR +T +AK GLID + Sbjct: 233 MTEETVREIADGRTYTAKQAKANGLIDEI 261 >gi|322371200|ref|ZP_08045752.1| signal peptide peptidase SppA, 36K type [Haladaptatus paucihalophilus DX253] gi|320549190|gb|EFW90852.1| signal peptide peptidase SppA, 36K type [Haladaptatus paucihalophilus DX253] Length = 341 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 117/222 (52%), Gaps = 5/222 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++ +I+R + D++A L++ L++PGG E I A ++ P + ++ AS Sbjct: 99 TDDIVTQIDRANDDENANGLLLRLNTPGGEVVPSEDIRLAAERFDG--PTVAYATDVCAS 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A E SLVGSIGV+ +++G+S + + + K P E Sbjct: 157 GGYWIASGCDELFAREASLVGSIGVIGSRVNAAELAERVGLSYERLAAGKYKDAGIPLKE 216 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ +Q ++D Y FV V+ R++ +T+ ++ R++ G +A+++GL+D +G Sbjct: 217 LDGDERDYLQGIIDGMYDDFVERVTTGRDLD-PETVRETEARVYLGDDAERIGLVDELGT 275 Query: 230 QEEVWQSLYA-LGVDQ-SIRKIKDWNPPKNYWFCDLKNLSIS 269 +E+V L LGV + S+R+ + P + + ++ S Sbjct: 276 REDVEARLAERLGVPEVSVREFEPSQPLRRRLNLGARGIAYS 317 >gi|256829567|ref|YP_003158295.1| signal peptide peptidase SppA, 67K type [Desulfomicrobium baculatum DSM 4028] gi|256578743|gb|ACU89879.1| signal peptide peptidase SppA, 67K type [Desulfomicrobium baculatum DSM 4028] Length = 611 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 1/192 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S+ + E + +D + A+++ L SPGGSA A E I I + + KPV+ + +AA Sbjct: 345 SESIAELFQMARQDPTVLAVVLRLDSPGGSAAASEEIHHEIARTQEAGKPVVVSMGSVAA 404 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y I+ +N IVAA T+L GSIG+ +P + LG++ + ++P+ +P Sbjct: 405 SGAYWIAAGANRIVAAPTTLTGSIGIFAAFPTFEDTAMNLGITTDGIGTTPLADLGNPLR 464 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ ++ + + ++ Y F+ V+ R +P + GR++ G EA L+D +G Sbjct: 465 PLSAQSERAIGHLLRFGYDLFIDRVASGRRLPAADVENSAQGRVFLGQEALSRKLVDQLG 524 Query: 229 GQEEVWQSLYAL 240 ++ ++ +L Sbjct: 525 DLDDALKTAASL 536 >gi|118602719|ref|YP_903934.1| peptidase S49 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567658|gb|ABL02463.1| peptidase S49 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 315 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 22/265 (8%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHV------------EDNSPHVARIAIRGQIE- 48 EFV + R + L V YF + S++ + SP VA + + G I+ Sbjct: 15 EFVRQNKSKRRWRIIFSLLFVGYFYFVSYIGVSGSGILETVLKKESPFVAEVVLSGTIQS 74 Query: 49 ----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITE 102 D+ E IE + ++A A+I+ ++SPGGS I++AI + K + K + Sbjct: 75 SGSIDADEAIELLHSAFESENAKAVILRINSPGGSPVQSSRIYKAIVRFKKQFDKKIYVV 134 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++ AS Y I A++ I A E+S++GSIGV+ + KLG+ + + K Sbjct: 135 IEDICASGCYYIVSAADEIYADESSIIGSIGVVMSSFGAVDAIKKLGIKRRLYTAGKYKG 194 Query: 163 EPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 FS + K + +Q ++D S+ F+ V R K L G IW G E+ K+ Sbjct: 195 LLDSFSPEDEKTLMHIQTSILDKSHQNFINAVKAGRGNKLSKHKDLFTGLIWLGQESNKL 254 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSI 246 GLID G + + + + +G+D I Sbjct: 255 GLID--GIADANYIAKHIIGIDSRI 277 >gi|332878311|ref|ZP_08446037.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683762|gb|EGJ56633.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 588 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 90/178 (50%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I + + +D A+++ ++SPGG A A E + R I + +K V + AAS Sbjct: 330 ETIIAALRKAVKDKEIKAIVLRINSPGGDALASELMHREIALARKQKKVYVSMGNYAASG 389 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+C + I A S+ GSIGV P GV+ ++V + P + S F + Sbjct: 390 GYYIACNAERIFAEAGSITGSIGVFGALPNASVLAKNWGVNAETVSTHPNALQYSYFQKP 449 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + V+ M + V+ Y F+ V+E R + ++ GR+W+G EA GL+D +G Sbjct: 450 SEHFVKEMTESVEQIYKVFLSRVAEGRGKTVAEIDSIAQGRVWSGKEALAKGLVDELG 507 >gi|297618683|ref|YP_003706788.1| signal peptide peptidase SppA, 36K type [Methanococcus voltae A3] gi|297377660|gb|ADI35815.1| signal peptide peptidase SppA, 36K type [Methanococcus voltae A3] Length = 367 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 103/180 (57%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D + I+ ++ ++ +I+ ++SPGGS+ A + I++V +KPV+ + M A Sbjct: 114 DVYDYIDWLDEAEKNPDIKGVIIKINSPGGSSIASTKLAEKIEEVSQKKPVVAYIEAMGA 173 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y + ++ IVA + +LVGSIGV + +DK+GV+ +K K SP+ Sbjct: 174 SAAYGAAASTGYIVAEKEALVGSIGVRMDILHYYGLMDKIGVNSTVIKGGEYKDIGSPYR 233 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + +M+Q +V++SY FV ++ RN+ Y++ L+ G+++ G +A ++GL+D G Sbjct: 234 PMTEEEQEMLQKIVNNSYVDFVSQIARDRNMTYEEANELAQGKVYDGRDALQLGLVDENG 293 >gi|225569105|ref|ZP_03778130.1| hypothetical protein CLOHYLEM_05185 [Clostridium hylemonae DSM 15053] gi|225161904|gb|EEG74523.1| hypothetical protein CLOHYLEM_05185 [Clostridium hylemonae DSM 15053] Length = 325 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 20/216 (9%) Query: 34 NSPHVARIAIRGQIEDSQ--------------ELIERIERISRDDSATALIVSLSSPGGS 79 NS ++A + + G I++ +E I+ + D T +++ + SPGG+ Sbjct: 52 NSDYIAVVKVEGTIQEQTASSLFETAEGYQHTTTMEYIDFLMSDSDNTGILLYVDSPGGT 111 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y E +++ + + K+ +P+ + AAS GY +S A++ I A ++ GSIGV+ Sbjct: 112 VYESEELYQKLNEYKDATGRPIWGYMAHYAASGGYYVSMAADNIYANPNTVTGSIGVIMA 171 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + +KLG+ S+ S K S+++ + + Q VD S+ FV +V++ R Sbjct: 172 GYDMSGLYEKLGIRYVSITSGKNK----DSSKLDEDQIAIYQTQVDESFGRFVDIVADGR 227 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ D+ L+DGR +T +AK+ GLID + E++ Sbjct: 228 DMSSDEVKKLADGRTYTAKQAKENGLIDNISLYEDI 263 >gi|108758821|ref|YP_630700.1| signal peptide peptidase SppA, 36K type [Myxococcus xanthus DK 1622] gi|108462701|gb|ABF87886.1| signal peptide peptidase SppA, 36K type [Myxococcus xanthus DK 1622] Length = 832 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 1/192 (0%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 ++ ++ +I +E+ D S A++V + S GG A ++ A+ + KPV+ + + Sbjct: 560 RLAGAETVIRALEQAQSDPSVAAIVVRVDSGGGEVLASHLMYEAVMEAAKHKPVVASMGD 619 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEP 164 MAAS GY + ++ + A T+L GSIGV + P V+ L LGV +S+ +P+ Sbjct: 620 MAASGGYYAAIGAHEVFALPTTLTGSIGVFYIKPAVEGLLSGLLGVHQESLTRAPLADIL 679 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + P+ + Q D+SY F+ V+ R + K ++ GR+W+G +A GL+ Sbjct: 680 DVWRPWTPEEQEAAQAWADASYDSFITEVALRRRMDKAKVDEVARGRVWSGQDALARGLV 739 Query: 225 DVVGGQEEVWQS 236 D +GG E S Sbjct: 740 DKLGGLLEAVDS 751 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 30/150 (20%), Positives = 65/150 (43%), Gaps = 3/150 (2%) Query: 57 IERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 ++ ++DD ++V + S PG S E + +A+ +++ + V GY ++ Sbjct: 325 LDLATQDDRLAGVVVKMESLPGVSWGKAEELRQALLRLRASGKRVMAVVLSTDDLGYFVA 384 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK-- 173 A++ I A + S++ G+ ++KLGV + K P S P Sbjct: 385 SAADRIYALQESILYINGLAVHLQTYGGTMEKLGVHWDVARVGRFKTAPEQLSRTEPSDA 444 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +++ +D+ + + V E R +P ++ Sbjct: 445 SLESTNAYLDTEVAVYEKAVQEGRKVPVER 474 >gi|27228584|ref|NP_758634.1| putative peptidase [Pseudomonas resinovorans] gi|219857006|ref|YP_002474038.1| probable peptidase [Pseudomonas sp. CA10] Length = 349 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 120/230 (52%), Gaps = 14/230 (6%) Query: 36 PHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 P A+I +RG I D +E L + + +++ A+I+ ++SPGGS ++ + Sbjct: 95 PVTAKIKVRGVIADGEEASAENLKRSLGKAFENENTKAVILEINSPGGSPVQAGHVYDEV 154 Query: 91 QKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLD 146 ++++ P V + ++ AS GY I+ A++ I A + SLVGSIGV + YV+ + Sbjct: 155 RRLRALHPDTKVYAVITDLGASGGYYIASAADEIFADKASLVGSIGVTAASFGYVE-LMQ 213 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKT 204 KLGV ++ S KA F NP+ + + V+ ++++ F+R V R + + Sbjct: 214 KLGVERRAYTSGEHKAFLDQFQPQNPEERKFWEGVLKTTHNQFIRSVEAGRGDRLKAKEN 273 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 L G IWTG +A +GL+D +G + V + + +GV + + + NP Sbjct: 274 PDLYSGLIWTGEQAVGLGLVDRLGDSDYVAREV--VGVSKIVDFTRKQNP 321 >gi|171057279|ref|YP_001789628.1| peptidase S49 [Leptothrix cholodnii SP-6] gi|170774724|gb|ACB32863.1| peptidase S49 [Leptothrix cholodnii SP-6] Length = 340 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 13/231 (5%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N PH A + +RG+I E L+ + D A A+++ ++SPGGS I Sbjct: 88 NGPHTALVELRGEIAVDTEASADVLLSGLRSAFEDSGAQAVVIRINSPGGSPVQAGIIHD 147 Query: 89 AIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I K K+ K V V E AS Y ++ A++ I + S+VGSIGVL ++ Sbjct: 148 EILRLKAKHDKEVYAVVEESCASGAYYVAVAADSIYVDKASIVGSIGVLMDGFGFTSLME 207 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS ++ Q ++D + F+++V + R +T Sbjct: 208 KLGVERRMITAGSNKGMLDPFSPLSESQRAFAQSMLDQIHQQFIKVVKDGRGERLKETPE 267 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 G W+G EA + GL D G E V + + ++ D+ P +N Sbjct: 268 TFSGLFWSGEEAVRQGLADGFGNLEFVAREIV------KAEEVIDYTPHEN 312 >gi|328797928|dbj|BAH10025.2| probable peptidase [Pseudomonas putida] gi|328797942|dbj|BAC41612.2| probable peptidase [Pseudomonas resinovorans] Length = 311 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 121/234 (51%), Gaps = 14/234 (5%) Query: 36 PHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 P A+I +RG I D +E L + + +++ A+I+ ++SPGGS ++ + Sbjct: 57 PVTAKIKVRGVIADGEEASAENLKRSLGKAFENENTKAVILEINSPGGSPVQAGHVYDEV 116 Query: 91 QKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLD 146 ++++ P V + ++ AS GY I+ A++ I A + SLVGSIGV + YV+ + Sbjct: 117 RRLRALHPDTKVYAVITDLGASGGYYIASAADEIFADKASLVGSIGVTAASFGYVE-LMQ 175 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKT 204 KLGV ++ S KA F NP+ + + V+ ++++ F+R V R + + Sbjct: 176 KLGVERRAYTSGEHKAFLDQFQPQNPEERKFWEGVLKTTHNQFIRSVEAGRGDRLKAKEN 235 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L G IWTG +A +GL+D +G + V + + +GV + + + NP + Sbjct: 236 PDLYSGLIWTGEQAVGLGLVDRLGDSDYVAREV--VGVSKIVDFTRKQNPLDRF 287 >gi|217420954|ref|ZP_03452459.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 576] gi|254184191|ref|ZP_04890781.1| peptidase, U7 family protein [Burkholderia pseudomallei 1655] gi|184214722|gb|EDU11765.1| peptidase, U7 family protein [Burkholderia pseudomallei 1655] gi|217396366|gb|EEC36383.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 576] Length = 333 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L V+ F++ S D S H A + I G+I +++++ Sbjct: 48 RIFFRFAFLAV--LGVLAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTA 105 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 106 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 165 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 166 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 225 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 226 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 285 Query: 234 WQSL 237 + + Sbjct: 286 ARDV 289 >gi|163795884|ref|ZP_02189848.1| dihydropyrimidinase [alpha proteobacterium BAL199] gi|159178917|gb|EDP63453.1| dihydropyrimidinase [alpha proteobacterium BAL199] Length = 583 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 7/188 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASA 110 ++ E ++ + D + A+I+ +SSPGGS A + + I +++ PVI +AAS Sbjct: 321 QITETVDEVLADKAVRAVILRISSPGGSYVASDTMRHDIGRLRAAGLPVIASFANIAASG 380 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSPF 167 GY + ++ I+A +L GSIG + LDKL V+I V +++ M + PF Sbjct: 381 GYFAALPADHIIAHPATLTGSIGAVGGKVSGSGLLDKLEVAIDRVEVGRNAGMFSSTRPF 440 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + Q ++ ++D Y F V E+R + + ++ GRIWTG +A++VGL+D + Sbjct: 441 TS---DQRQHLRRMLDDIYADFAGKVGEARRLSPGEIDAVARGRIWTGEDAQRVGLVDGL 497 Query: 228 GGQEEVWQ 235 GG E Q Sbjct: 498 GGYAEAMQ 505 >gi|24214911|ref|NP_712392.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|24195940|gb|AAN49410.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] Length = 579 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 1/174 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E ++ + ++ S A+I+ + SPGGSA+ E +++ I K++ +KPV + ++AS GY + Sbjct: 321 EALKELKKESSVKAVILEVDSPGGSAFVSELLYQEILKLQKKKPVYAYIQNISASGGYYL 380 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 SC ++ I A+ +VGSIG + +K KLG++ V + S + ++P++ Sbjct: 381 SCGASKIYASPYGIVGSIGSISIRFDLKNLYSKLGITKDRVGFYKYRDLLSEYGPIHPES 440 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++M+ + S F + VS+SR IP D G+++T ++ K +ID + Sbjct: 441 KKLMEQEIKESEGLFYKRVSDSRKIPISDLDKRFGQGKVFTSSQFLKERMIDSI 494 >gi|251792410|ref|YP_003007136.1| signal peptide peptidase SppA, 67K type [Aggregatibacter aphrophilus NJ8700] gi|247533803|gb|ACS97049.1| signal peptide peptidase SppA, 67K type [Aggregatibacter aphrophilus NJ8700] Length = 628 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 11/206 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ--------ELIERIERISRDDSAT-ALIVSLSSPGGSAYAG 83 D +A + + G I D + + I ++ R + DD +++ ++SPGGSA+A Sbjct: 324 DTENKIAVVNVEGAIIDGESDEDNVGGDTIAKLLRQAYDDKKVKGVVLRVNSPGGSAFAS 383 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + ++ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P + Sbjct: 384 EVIRQELTHLQQAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTFE 443 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K+GV+ VK+S + FS ++ ++Q ++ Y F+ VSE R++ + Sbjct: 444 KTIKKIGVTADGVKTSDLTL-GLLFSPLSSPLNDVIQLEIEHGYDQFLTKVSEGRHLTKE 502 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ G++W G+EA + L+D +G Sbjct: 503 QVDRIAQGQVWLGSEALEHKLVDELG 528 >gi|45657584|ref|YP_001670.1| protease IV [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600823|gb|AAS70307.1| protease IV [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 579 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 1/174 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E ++ + ++ S A+I+ + SPGGSA+ E +++ I K++ +KPV + ++AS GY + Sbjct: 321 EALKELKKESSVKAVILEVDSPGGSAFVSELLYQEILKLQKKKPVYAYIQNISASGGYYL 380 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 SC ++ I A+ +VGSIG + +K KLG++ V + S + ++P++ Sbjct: 381 SCGASKIYASPYGIVGSIGSISIRFDLKNLYSKLGITKDRVGFYKYRDLLSEYGPIHPES 440 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++M+ + S F + VS+SR IP D G+++T ++ K +ID + Sbjct: 441 KKLMEQEIKESEGLFYKRVSDSRKIPISDLDKRFGQGKVFTSSQFLKERMIDSI 494 >gi|217973227|ref|YP_002357978.1| signal peptide peptidase SppA [Shewanella baltica OS223] gi|217498362|gb|ACK46555.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS223] Length = 615 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 GQI + E + + D AL++ + SPGGSA+A E I + + +K KPV+ + Sbjct: 344 GQI-GGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSM 402 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS GY IS +++ I A T+L GSIG+ + L +GV V +S A Sbjct: 403 GSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASIGVHTDGVSTSEW-AG 461 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S ++P+ ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL Sbjct: 462 LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQVDKIAQGRVWSGKKALELGL 521 Query: 224 IDVVGGQEE 232 +D +G +E Sbjct: 522 VDELGDLDE 530 >gi|18977955|ref|NP_579312.1| protease IV [Pyrococcus furiosus DSM 3638] gi|18893729|gb|AAL81707.1| protease iv [Pyrococcus furiosus DSM 3638] Length = 329 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 107/199 (53%), Gaps = 3/199 (1%) Query: 32 EDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 E + +A + I G I+++ E+++++E I D S +++ + SPGG AI++ Sbjct: 81 ETANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGVLLWIDSPGGYIGPVRAIYKE 140 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++++ KP++ + A S GY I+C ++ I+A + VGSIGV++ + + + + G Sbjct: 141 VKELAYIKPIVAYISGYATSGGYYIACGADKIIADPYAQVGSIGVIYVHFNAQKYYEMNG 200 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++ K+ P K + + + P+ +++Q +D + F+ +V E RN+ K +D Sbjct: 201 IEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTFLDVVMEGRNLNETKVKEYAD 260 Query: 210 GRIWTGAEAKKVGLIDVVG 228 GR W E LID +G Sbjct: 261 GRAWFAYEVNGT-LIDDIG 278 >gi|160875523|ref|YP_001554839.1| signal peptide peptidase SppA [Shewanella baltica OS195] gi|160861045|gb|ABX49579.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS195] gi|315267710|gb|ADT94563.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS678] Length = 615 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 GQI + E + + D AL++ + SPGGSA+A E I + + +K KPV+ + Sbjct: 344 GQI-GGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSM 402 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS GY IS +++ I A T+L GSIG+ + L +GV V +S A Sbjct: 403 GSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASIGVHTDGVSTSEW-AG 461 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S ++P+ ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL Sbjct: 462 LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQVDKIAQGRVWSGKKALELGL 521 Query: 224 IDVVGGQEE 232 +D +G +E Sbjct: 522 VDELGDLDE 530 >gi|294494857|ref|YP_003541350.1| signal peptide peptidase A [Methanohalophilus mahii DSM 5219] gi|292665856|gb|ADE35705.1| signal peptide peptidase A [Methanohalophilus mahii DSM 5219] Length = 372 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 119/222 (53%), Gaps = 12/222 (5%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------EDSQELIERIERISRDDSAT 67 + ++Y++ ++ VA I I+G + S+++ I + DDS Sbjct: 90 SFAIIYYAAGGDFYPDNDRVAVIYIQGTMLTGSVPSGLGYATSEDISSSIRKAVDDDSVK 149 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ ++S GGS A E I I+K + PV+T + ++AASA Y +S ++++IVA Sbjct: 150 AIVLRVNSGGGSGSASEEINTEIRKAQQAGVPVVTSMGDVAASAAYHVSSSTDLIVANRN 209 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV++ + + + ++ G+ KS K + ++ + + V+ SY Sbjct: 210 TMTGSIGVIWTFRNMSAYYEEEGIDFHVAKSGEFKDMGGTWRGLSDEEKEYADRVIMESY 269 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + FV+ V++ RN+ + ++DGRI+TG AK++GLID G Sbjct: 270 NLFVQDVAQGRNMTVSEVKDIADGRIYTGVSAKRIGLIDEYG 311 >gi|78189660|ref|YP_379998.1| peptidase S49, protease IV [Chlorobium chlorochromatii CaD3] gi|78171859|gb|ABB28955.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium chlorochromatii CaD3] Length = 601 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D + +E + S A+++ + SPGG A A I + I +K ++ + +AA Sbjct: 326 DVATMQHSLEAALENKSVKAIVLRIDSPGGEAIASADILQMINAAATKKTLVVSMSGVAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY+++ IVA ++ GSIGV P ++ +K+G+ + + SPF+ Sbjct: 386 SGGYMVALGGKTIVAHPLTITGSIGVYALKPTIQGLAEKVGLQREVITRGRFADATSPFT 445 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +A Y+ F+ V+ SR + ++ GR+WTG+ AK+VGL+D +G Sbjct: 446 PLEGEAYNKFVASAGDVYNDFISKVATSRRMKVTAVDSVAGGRVWTGSRAKQVGLVDRMG 505 Query: 229 G 229 G Sbjct: 506 G 506 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/178 (17%), Positives = 85/178 (47%), Gaps = 3/178 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 QE++ + ++D+ + +++ L + + A+ V+ + ++ A + Sbjct: 78 QEVLFVLHEAAKDEQVSEVLLQLDGVEAAPAKIAEVRAAVADVRRKGKKVSAFLYRAEDS 137 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 YL++ A++ I+ + + G+ + + L+KLG+++++ + K+ PF+ Sbjct: 138 DYLLATAADTIIMQRGASLLLDGLKAESLFYTGTLNKLGITVQAAQWKEYKSGIEPFTRT 197 Query: 171 NP--KAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLID 225 + + + + ++D Y+ ++ VSE R I ++++ + + AK +GL+D Sbjct: 198 SASKEYREQINMLLDDVYNNYLSAVSERRKISRSAFEAIINNEALLSAERAKALGLVD 255 >gi|315634116|ref|ZP_07889405.1| signal peptide peptidase SppA [Aggregatibacter segnis ATCC 33393] gi|315477366|gb|EFU68109.1| signal peptide peptidase SppA [Aggregatibacter segnis ATCC 33393] Length = 628 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 38 VARIAIRGQIEDSQ--------ELIERIERISRDD-SATALIVSLSSPGGSAYAGEAIFR 88 +A + + G I D + + I + R + DD +++ ++SPGGSA+A E I + Sbjct: 329 IAVVNVEGAIVDGESDEENAGGDTIAMLLRQAHDDKDVKGVVLRVNSPGGSAFASEIIRQ 388 Query: 89 AIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + + K KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P + + K Sbjct: 389 EVTHLQKAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTFENTIKK 448 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GVS VK+S + A S S ++ + ++Q ++ Y F+ VSE R++ + + Sbjct: 449 IGVSADGVKTSDL-ALGSLLSPLSAELNDVLQLEIEHGYDQFLTKVSEGRHLTKAQVDKV 507 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 + G++W G+EA L+D +G Sbjct: 508 AQGQVWLGSEALAHKLVDELG 528 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 11/156 (7%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++I I+ ++DD L++ L+ GG + E + AI+ K+ K VI S Sbjct: 97 DVIYAIDAAAQDDKVKGLVLDLNYFQGGDLPSLEYVGEAIENFKDSGKQVIAYSDSYNQS 156 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 +L S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 157 QYFLASYADEIYM----NPIGSVSIEGLAQETLYYKEMLDKLDVNPHVFRVGTYKSAVEP 212 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 F ++++P+A +Q +++ + + V+ +R+IP Sbjct: 213 FLRNDMSPEARANLQRWLNTMWENYTAQVAINRDIP 248 >gi|113868537|ref|YP_727026.1| periplasmic serine protease (ClpP class) [Ralstonia eutropha H16] gi|113527313|emb|CAJ93658.1| periplasmic serine protease (ClpP class) [Ralstonia eutropha H16] Length = 394 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 11/233 (4%) Query: 7 KIKTRYV---MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 +I R+V +L+L+ +T+ F + + H A + + G+I ++ + ++ Sbjct: 108 RIFFRFVGLALLALILVTLFDFKGDGAISTSGRHTAMVTLEGEIAAGTPASAESINASLQ 167 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 D +A +I+ ++SPGGS I IQ+++ KP V E+ AS GY ++ Sbjct: 168 AAFADGNAAGVILKINSPGGSPVQAGIINDEIQRLRTLYPSKPFYVVVEEICASGGYYVA 227 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 228 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPKQK 287 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ + F+ +V E R L G W+G A ++GL D +G Sbjct: 288 AFAEAMLKQIHQQFIDVVKEGRGDRLKDDPELFSGLFWSGERAVELGLADGLG 340 >gi|52549905|gb|AAU83754.1| protease IV [uncultured archaeon GZfos33H6] Length = 251 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 2/164 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+I ++SPGG+ +A + I I+ + KP I V E AAS Y I+ A + IVA E S Sbjct: 52 AVIFEINSPGGTPFASKEIATCIENID--KPAIAWVREYAASGAYWIASACDEIVADELS 109 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 VGSIG + P + + K G+ I+++++ K P+ ++ + ++++ +D Sbjct: 110 TVGSIGAMSIRPDIGELMKKFGIDIETLRTGRYKGMGLPYEKLTEEERELLKKELDEIQD 169 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 F+ V+++R + K LS +++ G EAK++GLID +GG+E Sbjct: 170 NFLNAVAKNRKLDESKMKELSTAKVYLGREAKEMGLIDHLGGKE 213 >gi|171319456|ref|ZP_02908560.1| peptidase S49 [Burkholderia ambifaria MEX-5] gi|171095307|gb|EDT40290.1| peptidase S49 [Burkholderia ambifaria MEX-5] Length = 330 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS S H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSSDSKFTSGGHHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKHPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V E R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKEGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|297622896|ref|YP_003704330.1| peptidase S49 [Truepera radiovictrix DSM 17093] gi|297164076|gb|ADI13787.1| peptidase S49 [Truepera radiovictrix DSM 17093] Length = 546 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 94/186 (50%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 + G+ ++ L+ DD A++ ++S GGSA A + I+R + +++ +KPV+ Sbjct: 298 VGGKQAGAETLLRAFRAAEADDGVAAVVFYVNSGGGSALASDLIWREVVRLRRKKPVVAV 357 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + E+AAS G+ + ++ ++A T+L GSIGVL ++ F + G ++++ Sbjct: 358 MGEVAASGGFYVLTHADHVIAGATTLTGSIGVLTGKFVLEEFNRRYGFHPEAIRRGRFAL 417 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 SP + + Y F V+ R +P + L+ GR+WTG +A+ G Sbjct: 418 AMSPAHPFTDDERALQARAIAEVYARFTERVAAGRKLPLGRVEELAGGRVWTGRDAQARG 477 Query: 223 LIDVVG 228 L+D +G Sbjct: 478 LVDELG 483 >gi|315607923|ref|ZP_07882916.1| signal peptide peptidase SppA [Prevotella buccae ATCC 33574] gi|315250392|gb|EFU30388.1| signal peptide peptidase SppA [Prevotella buccae ATCC 33574] Length = 596 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ ++S GG AYA E ++R ++ + +KPV+ + MAAS Y +S + +VA T+ Sbjct: 347 AVVLRINSGGGDAYASEQLWRQVKLLNAKKPVVVSMSGMAASGAYYMSMGARWLVAQPTT 406 Query: 128 LVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV------NPKAVQMMQD 180 L GSIG+ P + + + KLG+ K++ M P V N +Q+ Sbjct: 407 LTGSIGIFACLPDFSELYNQKLGIRFDEEKTNEMATFSYPIGMVPMARHFNATEATAIQN 466 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V+ Y F + V+E R + + ++ GR+W G +A + L+D +GG EE Sbjct: 467 YVNRGYVLFRQRVAEGRKMKTAQVEDVAQGRVWLGTDALHLKLVDQLGGLEE 518 >gi|304408856|ref|ZP_07390477.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS183] gi|307302859|ref|ZP_07582614.1| signal peptide peptidase SppA, 67K type [Shewanella baltica BA175] gi|304352677|gb|EFM17074.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS183] gi|306913219|gb|EFN43641.1| signal peptide peptidase SppA, 67K type [Shewanella baltica BA175] Length = 615 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 GQI + E + + D AL++ + SPGGSA+A E I + + +K KPV+ + Sbjct: 344 GQI-GGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSM 402 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS GY IS +++ I A T+L GSIG+ + L +GV V +S A Sbjct: 403 GSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASIGVHTDGVSTSEW-AG 461 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S ++P+ ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL Sbjct: 462 LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQVDKIAQGRVWSGKKALELGL 521 Query: 224 IDVVGGQEE 232 +D +G +E Sbjct: 522 VDELGDLDE 530 >gi|329570276|gb|EGG52014.1| signal peptide peptidase SppA [Enterococcus faecalis TX1467] Length = 184 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 79/140 (56%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ T AAS GY IS S+ I A E + GSIGV+ L+KLGVS + KS Sbjct: 10 PIYTAFKNTAASGGYYISAGSDKIFATEETTTGSIGVIISGLNYSGLLEKLGVSDATYKS 69 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 +K SP + + + +++Q+ V S+Y FV +V++ RN+ + L+DGRI+ G + Sbjct: 70 GELKDMMSPQHKPSEEEKKVIQEFVMSAYDRFVNIVAKGRNMDTNAVKELADGRIYDGNQ 129 Query: 218 AKKVGLIDVVGGQEEVWQSL 237 A + GL+D +G E+ SL Sbjct: 130 AVENGLVDQIGYSEDALDSL 149 >gi|332971034|gb|EGK10005.1| signal peptide peptidase SppA [Kingella kingae ATCC 23330] Length = 336 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%) Query: 34 NSPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + PH A + + G+I S++ L E ++ R+ +A A+I+ +SPGGS F Sbjct: 82 HQPHTAVVKLTGEIGGSEQRNQVDILREGMQAAYRNPNAKAIIIHANSPGGSPVVSNIAF 141 Query: 88 RAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +++++ PV +M AS Y I+ A++ I A +SL+GSIGV+ Sbjct: 142 AEVRRMRAEHKNIPVYVVAQDMCASGCYYIAAAADKIFADPSSLMGSIGVIGSSFDATGL 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLG+ + + K PF+ +P+ + Q ++D + F++ V + R + Sbjct: 202 MEKLGIQRRVRIAGNNKGMGDPFTAESPEQQAIWQQMLDQIHGEFIQAVKQGRGNRLQEK 261 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + L GRI+TG EAKK GL+D +G Sbjct: 262 QYPDLFSGRIFTGIEAKKAGLVDDLG 287 >gi|56964512|ref|YP_176243.1| signal peptidase SppA [Bacillus clausii KSM-K16] gi|56910755|dbj|BAD65282.1| signal peptidase SppA [Bacillus clausii KSM-K16] Length = 328 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 2/163 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+++ SPGG I A+ + + KPV + MAAS GY ++ + I A Sbjct: 99 GIIIAVDSPGGGVLESAEIHDAVIEAQENYGKPVYISMGSMAASGGYYLAAPAEQIFAYP 158 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +L GSIGV+ + LDK+GV KS P K S + +++Q +VD Sbjct: 159 QTLTGSIGVIMSSLNITELLDKIGVEETVYKSGPYKDMMSGTRPPTEEEDEILQSIVDEY 218 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y FV +++ R + ++ L DGRI+TG +A + GLID +G Sbjct: 219 YDEFVEVIANGRGMDEERVRELGDGRIYTGRQALEAGLIDELG 261 >gi|269468535|gb|EEZ80189.1| periplasmic serine protease, ClpP class [uncultured SUP05 cluster bacterium] Length = 320 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 133/266 (50%), Gaps = 24/266 (9%) Query: 2 EFVLK-KIKTRYVMLSLVTLTVVYFSWSSHV------------EDNSPHVARIAIRGQIE 48 EFV + K +TR+ M+ L L V YF + S++ + SP A + + G I+ Sbjct: 20 EFVRQNKTRTRWRMV-LTLLFVGYFGFISYLSIEQSDLLEEVLKKESPFAAEVVLSGTIQ 78 Query: 49 DSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVIT 101 S E+ +E + + ++ A+I+ L+SPGGS I++ I ++K + K + Sbjct: 79 TSGEINADDALELLNDAFKAKNSKAVILRLNSPGGSPVQSSQIYQGILRLKKQHNKKLYV 138 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + ++ AS Y I+ +++ I A E+S+VGSIGV+ + KLG+ + + K Sbjct: 139 VIDDVCASGCYYIAASADAIYADESSIVGSIGVVISSFGAVEAIKKLGIERRLYTAGKHK 198 Query: 162 AEPSPFSEVNPKA-VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 FS+ + A V + ++++D S+ F+ + +R L G IW G +A+K Sbjct: 199 GLLDAFSDEDKTAIVHIKKNILDKSHQNFINAIKATRGDKLSDHPDLFSGLIWLGKDAEK 258 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSI 246 +GLID + + V + +GVD + Sbjct: 259 LGLIDGIADADYVASEI--IGVDARV 282 >gi|241889101|ref|ZP_04776405.1| putative signal peptide peptidase SppA [Gemella haemolysans ATCC 10379] gi|241864350|gb|EER68728.1| putative signal peptide peptidase SppA [Gemella haemolysans ATCC 10379] Length = 325 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 D+S + +I+I G+I ++ +I+ + + A+++S++SPGG Y Sbjct: 62 DSSEVIQKISIDGEINAEMTNTYSRGSVLNQIKEAKGNPNVKAILLSVNSPGGGVYETAE 121 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISC-ASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ A++ + K V + + AAS GY +S A I V ET+ GS+GV+ Y + F Sbjct: 122 LYNALKN--SGKDVYVSMKKTAASGGYYVSTPAKKIFVNTETT-TGSLGVIMSYVSAQKF 178 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ G+ ++++S KA ++ +++Q+ +Y FV+ ++E R++ D+ Sbjct: 179 LNDHGIKQETIRSGEQKAVGGLTEDLPESTRKILQEQNKEAYERFVKAIAEGRHLSEDEV 238 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 L+DGR +TG +A L D VG ++E+ Sbjct: 239 KKLADGRTYTGTQAVANKLADKVGTEDEL 267 >gi|126174276|ref|YP_001050425.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS155] gi|125997481|gb|ABN61556.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS155] Length = 615 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 GQI + E + + D AL++ + SPGGSA+A E I + + +K KPV+ + Sbjct: 344 GQI-GGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSM 402 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS GY IS +++ I A T+L GSIG+ + L +GV V +S A Sbjct: 403 GSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASIGVHTDGVSTSEW-AG 461 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S ++P+ ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL Sbjct: 462 LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQVDKIAQGRVWSGKKALELGL 521 Query: 224 IDVVGGQEE 232 +D +G +E Sbjct: 522 VDELGDLDE 530 >gi|330975218|gb|EGH75284.1| peptidase S49, SppA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 332 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVNALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|305663247|ref|YP_003859535.1| signal peptide peptidase SppA, 36K type [Ignisphaera aggregans DSM 17230] gi|304377816|gb|ADM27655.1| signal peptide peptidase SppA, 36K type [Ignisphaera aggregans DSM 17230] Length = 319 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 15/234 (6%) Query: 35 SPHVARIAIRGQIEDSQELI-----------ERIERISRDDSATALIVSLSSPGGSAYAG 83 +P++A I + G I+ Q L E + +I D A A++V ++SPGG+ A Sbjct: 35 TPYIALIELHGTIDYEQPLFSGSTITPKTVSELVNKILSDPYAKAVVVVVNSPGGTMAAF 94 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I+ ++K+ + K VI + +AAS GYLI+ + I+A ++ +GS+G + V Sbjct: 95 E-IYSILKKLSSEKIVIVYITNIAASGGYLIALPAREIIANPSATIGSVGAIATIINVHN 153 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L KLG+++ VKS +K S + E ++ ++ +VDS + F+ V E R Sbjct: 154 LLQKLGINVTIVKSGELKDVGSMYRETTETDIETIKSLVDSIANEFIEKVIECRGNKIKN 213 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKDWNP 254 + ++ EAK++GLID +G + + L L I++I+ P Sbjct: 214 ISEIRRAGVYPAREAKELGLIDDIGDLDYAINRARQLAGLPPTTPIKRIEPTKP 267 >gi|119356392|ref|YP_911036.1| signal peptide peptidase A [Chlorobium phaeobacteroides DSM 266] gi|119353741|gb|ABL64612.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium phaeobacteroides DSM 266] Length = 601 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 2/239 (0%) Query: 51 QELIERIERISRDD-SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L++R ++ D+ AL++ + SPGG A A + + +KP++ + +AAS Sbjct: 328 EKLLQRSLEVALDNRDVKALVLRIDSPGGDALASADMLEMLYFAAKKKPIVVSMSGVAAS 387 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+ + A N I A ++ GSIGV P + ++K G+ + V S F Sbjct: 388 GGYMAALAGNKIFAEPLTITGSIGVYALKPEISGLVEKTGLQREVVTRGRYADATSLFKP 447 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ A YH FV V+ SR + + ++ GR+W+G A + GLID +GG Sbjct: 448 LDKDAYDKFVAASGDVYHDFVSKVATSRKMRWAAADSVAGGRVWSGKRALQAGLIDSLGG 507 Query: 230 QEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + LG +D++ + + P + W L S +KQ + L Sbjct: 508 LHDAIREAQILGKIDKTKKPRILFYPERKSWMESLAEGDFSGFSRSVTIALKQRLIHEL 566 >gi|134295145|ref|YP_001118880.1| peptidase S49 [Burkholderia vietnamiensis G4] gi|134138302|gb|ABO54045.1| peptidase S49 [Burkholderia vietnamiensis G4] Length = 329 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 12/242 (4%) Query: 7 KIKTRYVML---SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L +L+ ++ FS S + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFALLAFALIDFSGDSKFS-SGRHTALVTIDGEIAAGTNANAEDINTALD 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ KP+ V ++ AS GY I+ Sbjct: 103 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRKTYPDKPLYVVVTDICASGGYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 163 SAADKIFVDKASIVGSIGVLMDGFGFTGLMSKLGVERRLHTSGENKGFYDPFSPETPKMD 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 223 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 282 Query: 236 SL 237 + Sbjct: 283 DV 284 >gi|239831270|ref|ZP_04679599.1| Na(+)/H(+) antiporter nhaA [Ochrobactrum intermedium LMG 3301] gi|239823537|gb|EEQ95105.1| Na(+)/H(+) antiporter nhaA [Ochrobactrum intermedium LMG 3301] Length = 290 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 15/246 (6%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +SL+SPGGS I+R I+ + +++K V V ++AAS GY+I Sbjct: 49 LEKAFTDKEAPAVAISLNSPGGSPVQSRLIYRRIRDLAAEHQKKVFIFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ ++ + + F+ +V E R + L G WTG +A+++GLID +G Sbjct: 166 KADIERLKSLQLEIHETFIDMVKERRGAKLAEDQDLFTGLFWTGIKAQQLGLIDGLGDMR 225 Query: 232 EVWQSLYALG-----VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + Y V+Q + P + +L+ SI++ L D L+ + + Sbjct: 226 SFLRKTYGDKVKLKLVEQKRSLLGRKVPGVDMALANLEPASIAAHLGDG--LLSVAEEKA 283 Query: 287 LWAVWN 292 LWA + Sbjct: 284 LWARYG 289 >gi|284164633|ref|YP_003402912.1| signal peptide peptidase SppA, 36K type [Haloterrigena turkmenica DSM 5511] gi|284014288|gb|ADB60239.1| signal peptide peptidase SppA, 36K type [Haloterrigena turkmenica DSM 5511] Length = 331 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 5/189 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++++I+R DDS AL+V L++PGG + I A ++ P I ++ AS Sbjct: 95 ADDIVDQIDRADEDDSVDALLVKLNTPGGEVVPSDDIRLAAERFDG--PTIAYATDVCAS 152 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A E S+VGSIGV+ +K+G+S + + K +P E Sbjct: 153 GGYWIASGCDELWAREGSIVGSIGVIGSRVNASDLAEKVGLSYERFAAGDYKDAGTPLKE 212 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVVG 228 ++ +Q ++D Y FV VS+ R++ D V ++ RI+ G +A+++ L+D +G Sbjct: 213 MDEDERAYLQGLIDDYYDTFVERVSDGRDL--DSEFVRDTEARIYLGEQARELELVDRLG 270 Query: 229 GQEEVWQSL 237 + E+ L Sbjct: 271 TRREIEDEL 279 >gi|188586361|ref|YP_001917906.1| Acid phosphatase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351048|gb|ACB85318.1| Acid phosphatase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 566 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 107/219 (48%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 + LV + + S N P + I G+ + E++ ++ + +IV + Sbjct: 288 VGLVKIEGMIIDGRSKAPQNYPPIPIPLIAGERAGDLTITEQLRKLGANPKIKGIIVFID 347 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA A E+I I+ + +KPVI + E AAS GY ++ ++ IV+ T+L GSIGV Sbjct: 348 SGGGSALASESIAYTIRSITRQKPVIALLGEKAASGGYYVASQADYIVSYPTTLTGSIGV 407 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L+KL ++ + + N + + MQ+ + +Y+ F+ V Sbjct: 408 VAGKAVNTNLLNKLLINREINVRGNSREMFYSHRVFNDREREKMQEGLMRTYNLFLERVC 467 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 E R + + ++ G++WTG +A GL+D +GG EE Sbjct: 468 EGRKMTKAQLDPIAKGKVWTGEQALAKGLVDELGGFEET 506 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 94/196 (47%), Gaps = 4/196 (2%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L ++++ IS D T +++ ++ + + A++ +KN + + +++GY Sbjct: 63 LKKQLKTISNDPRLTGVVLKQTNFNIPYTYLDEVIDALKILKNNNKKLYSWAKNYSTSGY 122 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF---SE 169 ++ + I + +G L + ++K L++LG+ K SP K S F S Sbjct: 123 FLASYCDEIFLQPGGKIDELGFLNESFFLKDALNQLGIEFDIFKISPYKT-ASDFLIRSN 181 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +A +M Q +++S Y F+ +S R + L + +T E+ ++GLID + G Sbjct: 182 SSKEAREMNQWIMNSIYDNFINNISWGRKKTKQEMEELVNNAPYTDNESLELGLIDKILG 241 Query: 230 QEEVWQSLYALGVDQS 245 +E++ + L L +S Sbjct: 242 EEDLVKFLKPLDKKES 257 >gi|166032602|ref|ZP_02235431.1| hypothetical protein DORFOR_02317 [Dorea formicigenerans ATCC 27755] gi|166026959|gb|EDR45716.1| hypothetical protein DORFOR_02317 [Dorea formicigenerans ATCC 27755] Length = 325 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 7/194 (3%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAG 111 ++ I+ + D +++ + SPGG+ Y E + + + K +P+ T + AAS G Sbjct: 86 MDYIDNLMDDSDNKGILLYVDSPGGAVYESEELHDKLIEYKETTGRPIWTYMAHYAASGG 145 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y+ S + I A + ++ GSIGV+ + +KLG+ S+ S K S++ Sbjct: 146 YMTSVTGDKIYANKNTVTGSIGVIMSGYDMSGLYEKLGIRYVSITSGVNK----DSSKLT 201 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + V + Q VD Y FV +V++ R++ D+ L+DGR +T +AK GLID + + Sbjct: 202 DEQVAIYQSQVDECYQEFVNIVADGRDMSADQVKALADGRTYTAKQAKANGLIDEIATYQ 261 Query: 232 EVWQSLYA-LGVDQ 244 +V + + LGVD+ Sbjct: 262 DVMNQMASELGVDE 275 >gi|330985586|gb|EGH83689.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. lachrymans str. M301315] Length = 332 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF + Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKAEETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|302187284|ref|ZP_07263957.1| peptidase S49, SppA [Pseudomonas syringae pv. syringae 642] Length = 332 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|289671962|ref|ZP_06492852.1| peptidase S49, SppA [Pseudomonas syringae pv. syringae FF5] Length = 332 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|121605973|ref|YP_983302.1| peptidase S49 [Polaromonas naphthalenivorans CJ2] gi|120594942|gb|ABM38381.1| peptidase S49 [Polaromonas naphthalenivorans CJ2] Length = 360 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 12/225 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNS-PHVARIAIRGQIED----SQELIERIERIS-RDDSAT 67 +L + L + + V D S PH A + I+G+I + S E + R + D+ + Sbjct: 87 LLFFIILLWMALQRGTPVTDASVPHTAVVEIKGEIAEGADASAEFVNAALRTAFEDEGSK 146 Query: 68 ALIVSLSSPGGS----AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 A+++ ++SPGGS + I R K K++KPV V E ASA Y I+ +++ I Sbjct: 147 AIVLLINSPGGSPVQAGMMNDEILRL--KTKHKKPVYAVVEESCASAAYYIAVSADQIFV 204 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S+VGSIGVL +DKLGV + + + K PFS + K Q ++D Sbjct: 205 DKASIVGSIGVLMDSFGFSGLMDKLGVERRLLTAGENKGFLDPFSPQSDKQRAFAQAMLD 264 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ +V R +T + G W G +A ++GL D +G Sbjct: 265 QIHQQFIAVVKAGRGKRLKETPEMFTGLFWNGQQAVELGLADHLG 309 >gi|322378926|ref|ZP_08053342.1| protease IV (PspA) [Helicobacter suis HS1] gi|321148668|gb|EFX43152.1| protease IV (PspA) [Helicobacter suis HS1] Length = 292 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 105/202 (51%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P++A++ + G I +S+ ++I +I ++ S ++ + SPGG+ A + + + Sbjct: 50 PNLAKLYLYGPIFESESFQDQINKILQNPSIKGALLMIDSPGGTISASVELSDMVASLAK 109 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + PV+ V + AS Y ++ I A +L+GSIGV+F + P +DKLG+ + V Sbjct: 110 KMPVVAYVRGVMASGSYYAGMMASKIYANRGALIGSIGVIFSGVNIAPLMDKLGIKTQGV 169 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K + E P+ Q + +++ Y FV V+++R++ T ++G+I++ Sbjct: 170 AKGAYKEVGTFMREWTPQEKQYLNGLLNEQYGMFVSDVAKARHLDPKDTPAFAEGKIFSA 229 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 +A + LID V +E ++L Sbjct: 230 KQALFLKLIDRVSTYDEAIKAL 251 >gi|254804075|ref|YP_003082296.1| putative ClpP class peptidase [Neisseria meningitidis alpha14] gi|254667617|emb|CBA03394.1| putative ClpP class peptidase [Neisseria meningitidis alpha14] Length = 328 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+I+ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A+KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADAQKVGLVDGLG 280 >gi|167837368|ref|ZP_02464251.1| peptidase, U7 family protein [Burkholderia thailandensis MSMB43] Length = 333 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 13/234 (5%) Query: 17 LVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIERIERISRDDSA 66 LV L + F++ S D S H A + I G+I +++++ ++ D Sbjct: 56 LVVLGALAFAFLSVSGDGSKLASGRHTAVVTIEGEIAASTNANAEDINTALDSAFEDSGT 115 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVA 123 +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ A++ I Sbjct: 116 VGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPGKPLYVVVSDMCASGGYYIAAAADKIYV 175 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S+VGSIGVL + KLGV + S K PFS PK Q ++D Sbjct: 176 DKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMDAHAQAMLD 235 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + F++ V + R ++ + G WTGA++ ++GL D G + V + + Sbjct: 236 QIHEQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVARDV 289 >gi|206559379|ref|YP_002230140.1| family S49 serine peptidase [Burkholderia cenocepacia J2315] gi|206561219|ref|YP_002231984.1| family S49 serine peptidase [Burkholderia cenocepacia J2315] gi|198035417|emb|CAR51293.1| serine peptidase, family S49 [Burkholderia cenocepacia J2315] gi|198037261|emb|CAR53183.1| serine peptidase, family S49 [Burkholderia cenocepacia J2315] Length = 330 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L+ L+ ++ FS S + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLAVFVLLAFALIDFSSDSKFSSSGRHTALVTIDGEIAAGVNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTVGVVLRINSPGGSPVQAGMVYDEIRRLRKKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|53804454|ref|YP_113935.1| signal peptide peptidase SppA [Methylococcus capsulatus str. Bath] gi|53758215|gb|AAU92506.1| putative signal peptide peptidase SppA [Methylococcus capsulatus str. Bath] Length = 327 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 8/209 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A + + G I D+ +IE + + +++ +++PGGS ++ I+ Sbjct: 77 HTAVVDVTGTIAEGGETDADTIIEGLREAAEAKGVKGIVLRMNTPGGSPVQSAYVYDEIR 136 Query: 92 KVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K P V V ++ AS GY I+ A++ I S+VGSIGV+ L+KL Sbjct: 137 RIKKEHPALPVYAVVTDVCASGGYYIASATDRIFVNPASIVGSIGVIMNGFGFVGTLEKL 196 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + + KA PF V+P Q +Q ++++ + F+ V R + Sbjct: 197 GVERRVMTAGDHKAILDPFGPVDPVEKQHVQRLLNTVHQQFIAAVKAGRGDRLKDRPEIF 256 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G +WTGAE ++GL+D VG EV +++ Sbjct: 257 SGLVWTGAEGIELGLVDAVGELHEVAETV 285 >gi|170720705|ref|YP_001748393.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida W619] gi|169758708|gb|ACA72024.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida W619] Length = 341 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 119/236 (50%), Gaps = 12/236 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + ++ L + + ++ H A + +RG I D + L++ + Sbjct: 55 IFFKLLTFVYLFGVLALFLPWTDMDKAASRSASHTALVEVRGVIADQEAASADNLVKSLR 114 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P I + ++ AS Y I+ Sbjct: 115 EAFKDPKTKAVVMRINSPGGSPVQAGYVYDEIRRLRGEYPDIKLYAVIADLGASGAYYIA 174 Query: 116 CASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A++ I A + SLVGSIGV Y +V ++KLGV ++ + KA PFS P+ Sbjct: 175 SAADEIYADKASLVGSIGVTAAGYGFVGS-MEKLGVERRTYTAGEHKAFLDPFSPEKPEE 233 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q V+++++ F+ +V + R + + L G +W+G +AK +GL+D +G Sbjct: 234 RAFWQGVLNTTHQQFIAMVKQGRGDRLKDKEHPELFSGLVWSGEQAKALGLVDGLG 289 >gi|297583628|ref|YP_003699408.1| signal peptide peptidase SppA, 36K type [Bacillus selenitireducens MLS10] gi|297142085|gb|ADH98842.1| signal peptide peptidase SppA, 36K type [Bacillus selenitireducens MLS10] Length = 328 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 3/192 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 D ++ + ++E + +I+ +++PGG + + I ++ KPV + Sbjct: 80 DHRQTLRQLEYAAESTDIYGVILQVNTPGGGVVESDELHNRIVAIQEEFDKPVYAVMGGQ 139 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS ++ I A + GSIGV+ Q V ++ GVS+++ S K SP Sbjct: 140 AASGGYYISAPADKIYANAQTFTGSIGVIIQSLNVAGLAEEWGVSLETFTSGEFKDILSP 199 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 EV +++ ++V SY FV +V R N+ D+ L+DGRI+TG +A + GL+D Sbjct: 200 TKEVTDDERELLNEIVMDSYEQFVDVVDNGRENLSRDEVYELADGRIFTGNQAVENGLVD 259 Query: 226 VVGGQEEVWQSL 237 +G ++ + + Sbjct: 260 EIGNRDAAIEDM 271 >gi|313608567|gb|EFR84447.1| putative signal peptide peptidase SppA [Listeria monocytogenes FSL F2-208] Length = 203 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVK 156 P + MAAS GY IS ++ I A++ S+GV+ Q Y Y + F+ KLGVS ++K Sbjct: 5 PFYVSMGSMAASGGYYISAPADKIFASKEXXXXSLGVIMQGYDYSE-FMKKLGVSDNTIK 63 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S K S + ++MQ ++D SY+ FV++V++ R + +K ++DGRI+ G Sbjct: 64 SGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAKGRGMSAEKVRKIADGRIYDGR 123 Query: 217 EAKKVGLIDVVGGQEEVWQSL 237 +AK+ GLID G QE+ ++L Sbjct: 124 QAKENGLIDEFGYQEDALEAL 144 >gi|260890698|ref|ZP_05901961.1| protease IV [Leptotrichia hofstadii F0254] gi|260859576|gb|EEX74076.1| protease IV [Leptotrichia hofstadii F0254] Length = 510 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 129/251 (51%), Gaps = 17/251 (6%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +++++E+ + + +++ ++S GGSA A E I++ + K+ P+ + + AAS GY Sbjct: 251 ILQKVEKAMQTKNLKGIVLRVNSGGGSALASEIIYQELTKL--NIPIYVSMSDTAASGGY 308 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSPFSE 169 IS A N + A ++ GSIGV+ P + DK GV SV K S + +P SE Sbjct: 309 YISMAGNKVFANNATITGSIGVVSMIPKLYNAQDKYGVHSNSVSKGKYSDINDSFAPLSE 368 Query: 170 VN-PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + K Q M++ +Y F VS++R I + + G+IW G EAK + L+D + Sbjct: 369 ESRAKITQSMEE----TYKEFKSRVSKNRKIDENTLENYAQGKIWLGDEAKNINLVDGIA 424 Query: 229 GQEEVWQSL---YALGVDQSIRKI---KDWNPP-KNYWFCDLKNLSISSLLEDTIPLMKQ 281 +EV + + L D ++ I +D++ K++ + S+S+ L+ IP +K+ Sbjct: 425 SLDEVIKIMAKDLGLRKDYAVESIYLEEDFSQKLKSFTNMVTEKFSLSTQLQKNIPQVKK 484 Query: 282 TKVQGLWAVWN 292 + +AV N Sbjct: 485 VFNEYDFAVQN 495 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 31/162 (19%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++++ ++ I + +I++L + + E + + +++K + +A Sbjct: 2 DILQSLDDIKNNSQVKGVIIALDTIDLPSSKIEELSKKFEELKANNKKVYAFGAYITNAN 61 Query: 112 YLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA--EPSPF 167 Y ++ +N ++V + ++ + G + Y K DKLG+S++ V+ K+ E Sbjct: 62 YKLAAIANEVVMVPSTSASLDLTGYHYSDIYYKGLFDKLGISMEVVRIGNYKSYGENYTG 121 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +E+ P+ + ++++ Y+ F+ +S++R I DK + SD Sbjct: 122 NEMTPELRSELTRILENRYNKFITDISKNRKI--DKNTLNSD 161 >gi|261400468|ref|ZP_05986593.1| signal peptide peptidase SppA [Neisseria lactamica ATCC 23970] gi|269209727|gb|EEZ76182.1| signal peptide peptidase SppA [Neisseria lactamica ATCC 23970] Length = 328 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A+KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADAQKVGLVDGLG 280 >gi|298486214|ref|ZP_07004277.1| Probable peptidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159221|gb|EFI00279.1| Probable peptidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 332 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|149925005|ref|ZP_01913327.1| peptidase S49, protease IV:Peptidase S49, SppA [Plesiocystis pacifica SIR-1] gi|149814120|gb|EDM73741.1| peptidase S49, protease IV:Peptidase S49, SppA [Plesiocystis pacifica SIR-1] Length = 887 Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 10/184 (5%) Query: 59 RISRDDSA-TALIVSLSSPGGSAYAGEAIFRAI--------QKVKNRKPVITEVHEMAAS 109 R R DSA +++ + S GGSA+A E ++R + + K P++ + ++AAS Sbjct: 609 RALRGDSACKGIVLRVDSGGGSAFASEVMWREVALTREAWEKDKKGSPPIVVSMSDVAAS 668 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV-KSSPMKAEPSPFS 168 GY + ++ I A ++ GSIGV++ + V LD LGV++ + + SP + + Sbjct: 669 GGYYVPVGADTIFAEPLTITGSIGVVYMHYDVSGLLDMLGVNVDRIERGSPAIDANAIWQ 728 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +P+ ++ Q ++ +Y F+ VS R + + + G +W+G AK +GLID G Sbjct: 729 PWSPEQLERQQKGIEQTYDLFLSRVSGGRGMTKEAINEVGRGHVWSGKRAKDIGLIDEFG 788 Query: 229 GQEE 232 G E Sbjct: 789 GLRE 792 Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 92/223 (41%), Gaps = 10/223 (4%) Query: 47 IEDSQELIERIERISRDDSA---TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 I + + LI + R+ R ++A + L++ G AG+ + A+++V++ + Sbjct: 346 IGNQRTLIATLRRLERAEAAGERSILLIKADGFGMGWAAGQELRDALRRVRDAGGHVYAY 405 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 E + Y I+ + + ++G+ + + K L K+GV ++SV K+ Sbjct: 406 AEQPNTRDYWIASVAEKVYVHPAGRFATVGLGARRLFYKDALAKIGVQVQSVHIDEYKSA 465 Query: 164 PSPFSEVNPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 F+ + Q ++D ++ + ++++R + EA Sbjct: 466 HESFTRSSRSDYDREQRTALLDDTWDTVLYDIAQARGMSISAVADTIFESPLGPQEAVDA 525 Query: 222 GLIDVVGGQEEVWQSL-----YALGVDQSIRKIKDWNPPKNYW 259 G D + ++EV ++L + GV S+R+ P + W Sbjct: 526 GFADAITHRDEVLETLGEQLDESGGVVVSLRRFAPTTPERETW 568 >gi|24373967|ref|NP_718010.1| signal peptide peptidase SppA, 67K type [Shewanella oneidensis MR-1] gi|24348413|gb|AAN55454.1|AE015683_1 signal peptide peptidase SppA, 67K type [Shewanella oneidensis MR-1] Length = 614 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 5/186 (2%) Query: 45 GQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 GQI DS + R R D AL++ + SPGGSA+A E I + + +K KPV+ Sbjct: 344 GQIGGDSTADLLRKARF--DKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVS 401 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + +AAS GY IS +++ I A T+L GSIG+ + L LG+ V +S A Sbjct: 402 MGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASLGIHTDGVSTSEW-A 460 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S ++P+ ++Q ++ Y F+ LV++ R I ++ ++ GR+W+G +A ++G Sbjct: 461 GLSVTRTLSPQIESVIQRHIERGYLDFISLVAKERKISLEQVDKIAQGRVWSGKKALELG 520 Query: 223 LIDVVG 228 L+D +G Sbjct: 521 LVDELG 526 >gi|114799830|ref|YP_761326.1| signal peptide peptidase SppA, 67K type [Hyphomonas neptunium ATCC 15444] gi|114740004|gb|ABI78129.1| signal peptide peptidase SppA, 67K type [Hyphomonas neptunium ATCC 15444] Length = 592 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASN 119 + D+ A++ + SPGGS A + I+RA+++ K KPV+ + AAS GY +S ++ Sbjct: 334 AEDEDVKAIVFRVDSPGGSPTASDQIWRAVERAKEAGKPVVVSMGAYAASGGYYVSTGAD 393 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP---SPFSEVNPKAVQ 176 I+A +L GSIG+ + +K+GV+ SV A SPF+E V+ Sbjct: 394 AILANRATLTGSIGIFGGKLALDGTFNKIGVTFDSVTVGGDFASAWGTSPFTETQEAEVK 453 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + Y F+ V R++ YD+ ++ GR+WTG A + GL+D +G Sbjct: 454 AS---LKRGYDRFLNHVGAGRDMTYDEVHEVARGRVWTGEAALQQGLVDEIG 502 >gi|110597071|ref|ZP_01385360.1| signal peptide peptidase SppA, 67K type:signal peptide peptidase SppA, 36K type [Chlorobium ferrooxidans DSM 13031] gi|110341262|gb|EAT59727.1| signal peptide peptidase SppA, 67K type:signal peptide peptidase SppA, 36K type [Chlorobium ferrooxidans DSM 13031] Length = 602 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 88/185 (47%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ D + L ++ D AL++ + SPGG A A + + + +KP++ + Sbjct: 324 GEGVDVESLKHSLDAALDDKKVKALVLRIDSPGGDALASAEMLQMLDSAAVKKPLVVSMS 383 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY+ + A + A+ ++ GSIGV P + + K G+ V + Sbjct: 384 GVAASGGYMAALAGKTVFASPLTITGSIGVYALKPEISALVAKTGLGRDVVTRGRLADAN 443 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 SPF ++ +A Q Y F+ V+ SR +P ++ GR+W+G A K GL+ Sbjct: 444 SPFKPLDKEAYQKFVAASGEIYDDFIGKVARSRRMPLTAVDSVAGGRVWSGTRALKAGLV 503 Query: 225 DVVGG 229 D GG Sbjct: 504 DRTGG 508 >gi|330973864|gb|EGH73930.1| peptidase S49, SppA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 332 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|313669287|ref|YP_004049571.1| protease [Neisseria lactamica ST-640] gi|313006749|emb|CBN88219.1| putative protease [Neisseria lactamica 020-06] Length = 328 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A+KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADAQKVGLVDGLG 280 >gi|309379804|emb|CBX21580.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 328 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A+KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADAQKVGLVDGLG 280 >gi|152985915|ref|YP_001347560.1| putative peptidase [Pseudomonas aeruginosa PA7] gi|150961073|gb|ABR83098.1| probable peptidase [Pseudomonas aeruginosa PA7] Length = 326 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 11/234 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIER 59 K + Y+ + L+ + + S H A I ++G I D + ++ + Sbjct: 42 FKSLTFLYLFVVLLAFSP-FASLEKSASRGGSHTALIEVKGMIADDEPASADNIVTALRA 100 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 101 AFEDEGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIAS 160 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV L+KLGV + S K+ PF P+ Q Sbjct: 161 AADQIYADKASLVGSIGVTAASFGFVGTLEKLGVERRVYTSGEHKSFLDPFQPQKPEETQ 220 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q V+D+++ F+ V + R + D L G +W+G +A ++GLID +G Sbjct: 221 FWQQVLDTTHKQFIDSVKKGRGDRLKVDGHPELFSGLVWSGEQALQLGLIDGLG 274 >gi|330952680|gb|EGH52940.1| peptidase S49, SppA [Pseudomonas syringae Cit 7] Length = 332 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|257487556|ref|ZP_05641597.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331012625|gb|EGH92681.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 332 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|300711899|ref|YP_003737713.1| signal peptide peptidase SppA, 36K type [Halalkalicoccus jeotgali B3] gi|299125582|gb|ADJ15921.1| signal peptide peptidase SppA, 36K type [Halalkalicoccus jeotgali B3] Length = 331 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 11/222 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++E+IE + D L+V L++PGG + I RAI V P I ++ S Sbjct: 94 TDDVVEQIEAAADDGDVEGLLVKLNTPGGEVVPSDDIRRAI--VAFEGPAIAYTTDVCGS 151 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + ++A E SLVGSIGV+ +++G+S + + K P E Sbjct: 152 GGYWIASGCDELLAREASLVGSIGVIGSRVNAAALAERVGLSYERFAAGEFKDAGVPLRE 211 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ +Q ++D Y FV V+E R + ++ ++ R++ G EA ++GL+D +G Sbjct: 212 MDDHERAYLQGLIDDFYGQFVERVAEGRELSEEEVRA-TEARVYVGEEALELGLVDALGT 270 Query: 230 QEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +E+ L L +D +R + P + + LSI S Sbjct: 271 REDAEDRLADLLDIDPEVRA---FEPDQGM----MARLSIGS 305 >gi|257126290|ref|YP_003164404.1| signal peptide peptidase SppA, 36K type [Leptotrichia buccalis C-1013-b] gi|257050229|gb|ACV39413.1| signal peptide peptidase SppA, 36K type [Leptotrichia buccalis C-1013-b] Length = 549 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 2/183 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++E + + L++ ++SPGGSA E I++ ++K+ P+ + ++ AS GY I Sbjct: 310 EKLEELKEIKNLKGLVLRINSPGGSALVSEKIYKKLKKL--TVPIYVSMGDLCASGGYYI 367 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + + A +L GSIGV+ YP V + KL V+++ +PF E+ + Sbjct: 368 ATTGKKLFANNFTLTGSIGVVMMYPEVVGTMKKLDVNLEGFGKGAGFDMLNPFEELGEDS 427 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + + ++ Y F V +R + ++ ++ GR+W G+EAK + L+D +G E+ Sbjct: 428 KEKLIHNMNEVYGEFKEHVMVARGMNDEELEKIAQGRVWLGSEAKNINLVDEIGTLEDCI 487 Query: 235 QSL 237 +++ Sbjct: 488 KAM 490 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 8/202 (3%) Query: 38 VARIAIRGQIEDSQ-ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 VA A++G+ + S ++++ + ++ D + +I+ + + E I + K+K Sbjct: 57 VAMPALKGKEKLSYYQILQGLNNLAEDKNIKKVIIDVDKLNLTLSQLEEISKIFDKIKKN 116 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI--GVLFQYPYVKPFLDKLGVSIKS 154 K V+ + + + Y + +N I +T I G L + Y+K FL+K G+ + Sbjct: 117 KEVVA-IGTLFEESRYRQAMLANKIFMFDTRQSTLIFRGYLHKEFYLKSFLEKFGIRMNV 175 Query: 155 VKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + K FS +++ + + ++++ D + FV LV R + +LS I Sbjct: 176 LHIGDYKVAGEKFSHNQMSEEKKESIKNIKDKVFEDFVELVKSKRGTDIENE-ILSGNLI 234 Query: 213 WTG-AEAKKVGLIDVVGGQEEV 233 + G +A + LID V +E+ Sbjct: 235 FAGKKKALEYKLIDGVADYDEI 256 >gi|71737114|ref|YP_273878.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557667|gb|AAZ36878.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325305|gb|EFW81372.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. B076] gi|320327710|gb|EFW83718.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. race 4] Length = 332 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTRGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|66044886|ref|YP_234727.1| peptidase S49, SppA [Pseudomonas syringae pv. syringae B728a] gi|63255593|gb|AAY36689.1| Peptidase S49, SppA [Pseudomonas syringae pv. syringae B728a] Length = 332 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|153853725|ref|ZP_01995081.1| hypothetical protein DORLON_01072 [Dorea longicatena DSM 13814] gi|149753475|gb|EDM63406.1| hypothetical protein DORLON_01072 [Dorea longicatena DSM 13814] Length = 327 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 96/173 (55%), Gaps = 6/173 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLI 114 I+ + D + +++ + SPGG+ Y E +++ +++ K ++P+ + AAS GY++ Sbjct: 91 IDELMDDSNNKGILLYVDSPGGTVYESEELYQKLKEYKETTKRPIWDYMAHYAASGGYMV 150 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S AS+ I A + GSIGV+ + KLG+ S+ S K + S F++ + Sbjct: 151 SMASDKIYANSNTTTGSIGVIMSGYDMSGLYKKLGIRYVSITSGKNK-DSSKFTD---EQ 206 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + QD ++ +Y FV +V++ R++ + L+DGR +T +AK GLID + Sbjct: 207 IAIYQDQINEAYEEFVNIVADGRDMSVEDVKKLADGRTYTAKQAKNNGLIDEI 259 >gi|328544962|ref|YP_004305071.1| peptidase, S49 (Protease IV) family [polymorphum gilvum SL003B-26A1] gi|326414704|gb|ADZ71767.1| Peptidase, S49 (Protease IV) family [Polymorphum gilvum SL003B-26A1] Length = 285 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 4/187 (2%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASN 119 R A ALI++ SPGGS IFR I+ + K++K V+ + ++AAS GY+++ A + Sbjct: 55 RKAPAVALIIN--SPGGSPVQSRLIFRRIRDLAEKHKKDVLVFIEDVAASGGYMLALAGD 112 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA S+VGSIGV+ +DK+GV + + KA PF NP+ V ++ Sbjct: 113 EIVADPASIVGSIGVVSAGFGFTGLIDKIGVERRVYTAGEKKAILDPFRPENPEDVAHLK 172 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R L G+ WTG A+ +GL+D +G V + Y Sbjct: 173 ALQHEIHEIFIDMVRERRGDILADNPDLFSGQFWTGRTARDLGLVDSLGDLSAVLRRRYG 232 Query: 240 LGVDQSI 246 V+ + Sbjct: 233 EAVEPRL 239 >gi|257125230|ref|YP_003163344.1| signal peptide peptidase SppA, 67K type [Leptotrichia buccalis C-1013-b] gi|257049169|gb|ACV38353.1| signal peptide peptidase SppA, 67K type [Leptotrichia buccalis C-1013-b] Length = 594 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 39/262 (14%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++++IE+ ++ + +++ ++S GGSA A E I++ + K+K PV + + AAS GY Sbjct: 335 ILQKIEKATQTKNLKGIVLRVNSGGGSALASEVIYQELSKLK--IPVYVSMADTAASGGY 392 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV---SIKSVKSSPMKAEPSPFSE 169 IS A + A ++ GSIGV+ P + DK GV SI + S + +P SE Sbjct: 393 YISTAGKKVFANSATITGSIGVVSMLPKLYNAQDKYGVRSNSISKGRYSDINDSFAPLSE 452 Query: 170 VN-PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + K Q M++ +Y F VS++R I + + G+IW G EAK + L+D + Sbjct: 453 ESRAKISQSMEE----TYKEFKSRVSKNRKIDENTLENYAQGKIWLGDEAKDIKLVDGIA 508 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNY----------WFCDLKNLS--------ISS 270 +EV + + KD N KNY + LK+LS +S+ Sbjct: 509 SLDEVIKIM-----------AKDLNLRKNYAVENIYLEEDFSQKLKSLSNMITAKFNLSA 557 Query: 271 LLEDTIPLMKQTKVQGLWAVWN 292 LE +IP K+ + +A+ N Sbjct: 558 QLEKSIPQAKKAFNEYDFAMQN 579 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 37/183 (20%), Positives = 89/183 (48%), Gaps = 11/183 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASA 110 +++ ++ I ++ ++++L + S+ E + + +++K N K V + S Sbjct: 86 DILNSLDDIKNNNQVKGVVIALDTINLSSAKIEELIKKFEELKANNKKVYAFGAYITNSN 145 Query: 111 GYLISCASNII-VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 L S A ++ V + ++ + G + Y K DK+GV+++ V+ K+ + Sbjct: 146 YKLASIADEVVMVPSASASLDLTGYHYSDLYYKGLFDKIGVNMEVVRIGNYKSYGEEYIG 205 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRI--WTGAEAKKVG 222 +++ P+ + ++++ Y+ F+ V+++R + DK + +D G I T A+ G Sbjct: 206 NDMTPELRSELTRILENRYNKFITDVAKNRKV--DKNALNNDIVNGNITNLTPFSARDKG 263 Query: 223 LID 225 L+D Sbjct: 264 LVD 266 >gi|113970247|ref|YP_734040.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-4] gi|113884931|gb|ABI38983.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-4] Length = 614 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + + D AL++ + SPGGSA+A E I + + +K KPV+ + +AAS GY Sbjct: 353 ELLRKARFDKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSMGSLAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L LG+ V +S A S ++P+ Sbjct: 413 ISASADYIFATPTTLTGSIGIFGMITTFEDSLASLGIHTDGVSTSEW-AGLSVTRTLSPQ 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL+D +G Sbjct: 472 IESVIQRHIERGYLDFISLVAKERKMTLEQVDSIAQGRVWSGKKALELGLVDELG 526 >gi|325133299|gb|EGC55965.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M13399] Length = 328 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A+KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADAQKVGLVDGLG 280 >gi|260890123|ref|ZP_05901386.1| hypothetical protein GCWU000323_01285 [Leptotrichia hofstadii F0254] gi|260860146|gb|EEX74646.1| signal peptide peptidase SppA, 36K type [Leptotrichia hofstadii F0254] Length = 262 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 98/187 (52%), Gaps = 2/187 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + + E++E + + L++ ++SPGGSA E I++ ++K+ P+ + ++ AS Sbjct: 19 ENVCEKLEELKEIKNLKGLVLRINSPGGSALVSEKIYKKLKKL--TVPIYVSMGDVCASG 76 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+ + A +L GSIGV+ YP V + KL ++++ +PF ++ Sbjct: 77 GYYIATTGKKLFANNFTLTGSIGVVMMYPEVTGTMKKLDINLEGFGKGAGFDMLNPFEKL 136 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + + + ++ Y F V +R + ++ ++ GR+W G+EAK + L+D +G Sbjct: 137 GEDSKEKLIHNMNEVYGEFKEHVMVARGMNDEELEKIAQGRVWLGSEAKNINLVDEIGTL 196 Query: 231 EEVWQSL 237 E+ +S+ Sbjct: 197 EDCIKSM 203 >gi|126438593|ref|YP_001059819.1| peptidase, U7 family protein [Burkholderia pseudomallei 668] gi|126218086|gb|ABN81592.1| peptidase, U7 family protein [Burkholderia pseudomallei 668] Length = 333 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D S H A + I G+I +++++ Sbjct: 48 RIFFRFAFLAV--LGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTA 105 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 106 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 165 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 166 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 225 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 226 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 285 Query: 234 WQSL 237 + + Sbjct: 286 ARDV 289 >gi|148244822|ref|YP_001219516.1| peptidase S49 [Candidatus Vesicomyosocius okutanii HA] gi|146326649|dbj|BAF61792.1| peptidase S49 [Candidatus Vesicomyosocius okutanii HA] Length = 319 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 10/227 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++ ++ SP VA + + G I+ D+ E IE + + ++A A+I+ ++SPGGS Sbjct: 53 NTALKKESPFVAEVVLSGTIQSSGSIDADETIELLYSAFKLENAKAIILRINSPGGSPVQ 112 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 I++AI ++K + K V ++ AS Y I+ A++ I A E+S++GSIGV+ Sbjct: 113 SSRIYKAIIRLKKQFDKKFYVVVEDVCASGCYYIASAADEIYADESSIIGSIGVIMSSFG 172 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNI 199 + KLG+ + + K FS N K + +Q V+D + F+ V R Sbjct: 173 AVDAIKKLGIKRRLYTAGKYKGLLDSFSPENEKILAHIQIHVLDKLHQNFINAVKAGRGN 232 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 K L G IW G +A K+GLID + V + + +G+D + Sbjct: 233 RLSKHKDLFTGLIWLGQDANKLGLIDGIADTNYVAKHI--IGIDSRV 277 >gi|237813214|ref|YP_002897665.1| peptidase, U7 family protein [Burkholderia pseudomallei MSHR346] gi|237504696|gb|ACQ97014.1| peptidase, U7 family protein [Burkholderia pseudomallei MSHR346] Length = 305 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D S H A + I G+I +++++ Sbjct: 20 RIFFRFAFLAV--LGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTA 77 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 78 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 137 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 138 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 197 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 198 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 257 Query: 234 WQSL 237 + + Sbjct: 258 ARDV 261 >gi|304312941|ref|YP_003812539.1| Peptidase S49 [gamma proteobacterium HdN1] gi|301798674|emb|CBL46906.1| Peptidase S49 [gamma proteobacterium HdN1] Length = 335 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 14/228 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSA 66 Y ++L +V + S + +S HV + + G I D+ ++ + ++R + ++ Sbjct: 58 YFFVALAMFSVNWDSGEDSMGASSDHVGVVDLDGMIMAGGDNDADQISKGLQRAFKAQNS 117 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP------VITEVHEMAASAGYLISCASNI 120 A+++ ++SPGGS I+R I++++ + P VIT+V AS Y ++ A++ Sbjct: 118 KAVLLRINSPGGSPVQSATIYREIKRLRAKYPSKKLYAVITDV---GASGAYYVAAAADE 174 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +SLVGSIGV+ + ++KLG+ + + S KA PFS + P + Sbjct: 175 IYADPSSLVGSIGVISEGFGFVGGMEKLGIERRLITSGKNKAFLDPFSPLAPAHKAYFSE 234 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V++ + F+ V + R + + G +W+G +A +GLID G Sbjct: 235 VLNVVHQQFINAVKDGRGDRLKDSPDMFSGLVWSGEQALPLGLIDGYG 282 >gi|117920409|ref|YP_869601.1| signal peptide peptidase SppA, 67K type [Shewanella sp. ANA-3] gi|117612741|gb|ABK48195.1| signal peptide peptidase SppA, 67K type [Shewanella sp. ANA-3] Length = 614 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + + D AL++ + SPGGSA+A E I + + +K KPV+ + +AAS GY Sbjct: 353 ELLRKARFDKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSMGSLAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L LG+ V +S A S ++P+ Sbjct: 413 ISASADYIFATPTTLTGSIGIFGMITTFEDSLASLGIHTDGVSTSEW-AGLSVTRTLSPQ 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL+D +G Sbjct: 472 IESVIQRHIERGYLDFISLVAKERKMTLEQVDSIAQGRVWSGKKALELGLVDELG 526 >gi|114047564|ref|YP_738114.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-7] gi|113889006|gb|ABI43057.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-7] Length = 614 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 E + + D AL++ + SPGGSA+A E I + + +K KPV+ + +AAS GY Sbjct: 353 ELLRKARFDKHIKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSMGSLAASGGYW 412 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS +++ I A T+L GSIG+ + L LG+ V +S A S ++P+ Sbjct: 413 ISASADYIFATPTTLTGSIGIFGMITTFEDSLASLGIHTDGVSTSEW-AGLSVTRTLSPQ 471 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++GL+D +G Sbjct: 472 IESVIQRHIERGYLDFISLVAKERKMTLEQVDRIAQGRVWSGKKALELGLVDELG 526 >gi|307109116|gb|EFN57354.1| hypothetical protein CHLNCDRAFT_57181 [Chlorella variabilis] Length = 707 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 9/204 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S E+I ++ + ++ + A+++ + SPGG A A + ++R ++++ KPV+ + ++AAS Sbjct: 387 SGEVIAQLRSVKKNKNVAAVVLRIDSPGGEALASDLMWREVRELAKTKPVVASMADVAAS 446 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSP 166 GY ++ A + IVA ++ GSIGV+ +K +KLG + +++ K + + AE Sbjct: 447 GGYYMAMACSKIVAEPLTITGSIGVVTGKFNLKSLYEKLGYAKENISKGKYAQLLAENKK 506 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F+ P+ + +Y F + SR + + ++ GR+W+G A +GL+D Sbjct: 507 FT---PEEEALFDASATHAYESFRDKAALSRGMSVEAMQEVAQGRVWSGQRAATLGLVDA 563 Query: 227 VGGQEEVWQ---SLYALGVDQSIR 247 VGG Q L D+ +R Sbjct: 564 VGGISRALQLAKQAAGLAADEGVR 587 >gi|320103655|ref|YP_004179246.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] gi|319750937|gb|ADV62697.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] Length = 369 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 8/245 (3%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGY 112 E++ +RD + A++V ++SPGG A +A++R +Q + + RKP + + ++ A GY Sbjct: 115 EKLAAAARDPTIMAVVVRINSPGGGVAATDALWREVQSFRSRTRKPTVAAIIDVGAGGGY 174 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ + IVAA +++G IGV+ VK + + V +S+K+ S ++ Sbjct: 175 YLAAGCDRIVAAPGAIIGGIGVVLNLYNVKDLMAQFNVFSQSIKAGDKIDLGSSVEPLDD 234 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 ++ Q++Q++ D + F ++V R P + L DGRI + A ++GLID +G Sbjct: 235 ESRQLLQEMADEYHERFKQVVRRGRPGLTPQAEPLAF-DGRIMSARRALELGLIDEIGHL 293 Query: 231 EEVWQSLYAL-GVDQSIRKIKDWNPPKNY-WFCDLKNLSI-SSLLEDTIPLMKQTKVQGL 287 E+ + L GV ++ + Y + N I + LL +IP +++ K+ G Sbjct: 294 EDALATARTLAGVPDAVPVLFRRRGDAAYSLYAVTPNTPIQNQLLPFSIPGVERAKLPGF 353 Query: 288 WAVWN 292 +W Sbjct: 354 LYLWQ 358 >gi|110667987|ref|YP_657798.1| signal peptide peptidase [Haloquadratum walsbyi DSM 16790] gi|109625734|emb|CAJ52167.1| probable signal peptide peptidase [Haloquadratum walsbyi DSM 16790] Length = 319 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 3/191 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++ERIE DD+ AL+V L++PGG + I RA ++ P I + AS Sbjct: 81 ADDIVERIEDADDDDAIEALLVELNTPGGEVLPSDDIRRA--AIEFDGPTIAYATDTCAS 138 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A + SL+GSIGV+ P DKLG+S + + K P E Sbjct: 139 GGYWIASGCDEMWARDVSLIGSIGVVGSRPNASGLADKLGISYEQFTAGEYKDAGVPLRE 198 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +Q +VD Y FV VSE R++ ++ + ++ RI+ G +A ++GLID +G Sbjct: 199 IEDGEREYLQSIVDGYYDQFVETVSEGRDMDPEQ-IRDTEARIYLGNDALEIGLIDELGT 257 Query: 230 QEEVWQSLYAL 240 +++V + L Sbjct: 258 EDDVKDRIENL 268 >gi|257468386|ref|ZP_05632480.1| protease IV [Fusobacterium ulcerans ATCC 49185] gi|317062659|ref|ZP_07927144.1| protease IV [Fusobacterium ulcerans ATCC 49185] gi|313688335|gb|EFS25170.1| protease IV [Fusobacterium ulcerans ATCC 49185] Length = 584 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 91/185 (49%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 LIE I + +DD +++ ++SPGGSA + I I + KP+ + +AAS GY Sbjct: 340 LIEEINKALKDDGVKGIVLRINSPGGSALSANIISNKIIEANKIKPIYVSIGGVAASGGY 399 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ + I A + SL GSIGV+ P +K L + +++ VK S + + Sbjct: 400 YLAASGEKIYADKESLTGSIGVVSIIPNIKKMLGNVSINVDEVKKGEYSDIYSMVKDFDA 459 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + Y+ F+ VS R + ++ G++W G EA ++GL+D +GG E+ Sbjct: 460 DKRDKLYASNLKVYNEFIDTVSFGRKLNRQHVEKIAQGKVWLGEEALELGLVDEIGGLED 519 Query: 233 VWQSL 237 + L Sbjct: 520 TVKGL 524 Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust. Identities = 36/197 (18%), Positives = 85/197 (43%), Gaps = 21/197 (10%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 +RGQ + +++ + + RD + +++ L + ++ E + + + +K K + Sbjct: 80 LRGQDTNFFSMLKTFDYLERDSNIKGVVLKLDNLSLNSAQVEELGKKLDSLKKNKKEVYS 139 Query: 103 VHEMAASAGYLISCASNII-----VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 MA + Y ++ S+ I ++A ++ G G L Y K D++G+ + Sbjct: 140 YMTMADNRNYSLAIKSDHIFMPPAMSAPVNITGYYGELM---YYKLLADRMGIEFNVIHV 196 Query: 158 SPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KA ++ ++ + + ++ + + Y FV ++ R + +D + +I G Sbjct: 197 GDYKAYGENLTKEHISKEYKENIERMYNKKYANFVNNITVERKVNHD----FINEKILNG 252 Query: 216 -------AEAKKVGLID 225 + KK+ LID Sbjct: 253 DLMASEPNQMKKLNLID 269 >gi|317496118|ref|ZP_07954478.1| signal peptide peptidase SppA [Gemella moribillum M424] gi|316913693|gb|EFV35179.1| signal peptide peptidase SppA [Gemella moribillum M424] Length = 323 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 110/211 (52%), Gaps = 10/211 (4%) Query: 31 VEDNSPH-VARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 V+ NS + +I+I G+I +I +I+ + + A+++S+++PGG Y Sbjct: 57 VDGNSDETIQKISIEGEIGAEMTNTYSRASIINQIKEAKSNSNVKAILLSVNTPGGGVYE 116 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 ++ ++ + K V + + A S GY +S A+ I A + GS+GV+ + + Sbjct: 117 TAELYNELKN--SGKDVYVSMKKQATSGGYYVSMAAKKIFANTETTTGSLGVIMSFVSAQ 174 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +L+ G+ ++++S KA ++ ++ Q+ +Y FV+ +++ RN+ D Sbjct: 175 KYLNDHGIKQETIRSGEQKAIGGLLEDLPESTRKIYQEQNKEAYDRFVKAIAQGRNMSED 234 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + L+DGR +TG +A + LID +G +E++ Sbjct: 235 EVRKLADGRTYTGTQAVENKLIDKIGTEEDL 265 >gi|289624530|ref|ZP_06457484.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649341|ref|ZP_06480684.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. aesculi str. 2250] gi|330869275|gb|EGH03984.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 332 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLYPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|170700222|ref|ZP_02891238.1| peptidase S49 [Burkholderia ambifaria IOP40-10] gi|170134855|gb|EDT03167.1| peptidase S49 [Burkholderia ambifaria IOP40-10] Length = 330 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSSDAKFSAGGHHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q++++ + F++ V E R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLNQVHAQFIKAVKEGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|304388757|ref|ZP_07370815.1| probable protease [Neisseria meningitidis ATCC 13091] gi|304337321|gb|EFM03497.1| probable protease [Neisseria meningitidis ATCC 13091] Length = 328 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+I+ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|308390209|gb|ADO32529.1| putative protease [Neisseria meningitidis alpha710] Length = 328 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 10/214 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGSRLKFQQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + GR++TGA+A KVGL+D +G V Q + Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLGNIYSVAQDV 289 >gi|218890829|ref|YP_002439693.1| putative peptidase [Pseudomonas aeruginosa LESB58] gi|218771052|emb|CAW26817.1| probable peptidase [Pseudomonas aeruginosa LESB58] Length = 326 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 16/230 (6%) Query: 15 LSLVTLTVVYFSWS------SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRD 63 L+ + L VV ++S + H A I ++G I D + ++ + +D Sbjct: 45 LTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALRAAFKD 104 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNI 120 + +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ A++ Sbjct: 105 EGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIASAADQ 164 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A + SLVGSIGV ++KLGV + S K+ PF P+ Q Q Sbjct: 165 IYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEETQFWQQ 224 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+D+++ F+ V + R + + L G +W+G +A ++GLID +G Sbjct: 225 VLDTTHKQFIDSVKKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLG 274 >gi|107022191|ref|YP_620518.1| peptidase S49 [Burkholderia cenocepacia AU 1054] gi|116689137|ref|YP_834760.1| peptidase S49 [Burkholderia cenocepacia HI2424] gi|170732425|ref|YP_001764372.1| peptidase S49 [Burkholderia cenocepacia MC0-3] gi|254245930|ref|ZP_04939251.1| Periplasmic serine protease (ClpP class) [Burkholderia cenocepacia PC184] gi|105892380|gb|ABF75545.1| peptidase S49 [Burkholderia cenocepacia AU 1054] gi|116647226|gb|ABK07867.1| peptidase S49 [Burkholderia cenocepacia HI2424] gi|124870706|gb|EAY62422.1| Periplasmic serine protease (ClpP class) [Burkholderia cenocepacia PC184] gi|169815667|gb|ACA90250.1| peptidase S49 [Burkholderia cenocepacia MC0-3] Length = 330 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS S + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLGVFVLLAFALIDFSSDSKFSSSGRHTALVTIDGEIAAGVNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTVGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|224825741|ref|ZP_03698845.1| peptidase S49 [Lutiella nitroferrum 2002] gi|224601965|gb|EEG08144.1| peptidase S49 [Lutiella nitroferrum 2002] Length = 312 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 7/199 (3%) Query: 37 HVARIAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 H A + ++G I+ +++LI + RD + +I+ +SPGGS ++ I++ Sbjct: 65 HTATLQLKGVIDSDNDTAEKLITGLNDAYRDKNTRGIIIQANSPGGSPVLSGMVYDEIRR 124 Query: 93 VKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 K P I V E+ AS Y I+ A++ I + S++GSIGVL ++KLG Sbjct: 125 QKKLHPAIPLYVVVEEVCASGCYYIAAAADKIFVDKASIIGSIGVLSDGFGFTGVMEKLG 184 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V + S KA PFS +NPK + Q ++D + F+ V + R L Sbjct: 185 VERRLKTSGENKAMGDPFSPLNPKQEAIRQQLLDDIHQQFISAVKDGRGARLHNDPELFS 244 Query: 210 GRIWTGAEAKKVGLIDVVG 228 G IW G ++ +GL D G Sbjct: 245 GLIWLGTKSIPLGLADGYG 263 >gi|119503764|ref|ZP_01625846.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2080] gi|119460272|gb|EAW41365.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2080] Length = 609 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 21/246 (8%) Query: 21 TVVYFSWSSHVEDN---SPH-VARIAIRGQIEDSQ---------ELIERIERISRDDSAT 67 T+ Y ++ + D+ S H +A I G I + + ++++I + D+ Sbjct: 305 TISYGKYAKQISDDYLDSGHQIAVITAEGVIREGEISPGVAGANGVVKQIRKAHEDEDTK 364 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 A++ ++SPGGS A E + + K + VI + + AAS G IS ++ I A T Sbjct: 365 AIVFRVNSPGGSIIASEMMRDELLAAKRKGIKVIVSMGDYAASGGVYISTPADYIFAEPT 424 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P ++ +D +GV+ V +S P ++ ++ ++Y Sbjct: 425 TITGSIGVAIALPTLENAMDYIGVNFDGVVTSKHGGW-DPTQAIDDDLDKIFASWGSAAY 483 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ V+ESR+ YD ++ GR+W AK +GL+D +GG ++ AL S+ Sbjct: 484 DRFINFVAESRSQTYDDIKAVAGGRVWIATSAKDIGLVDEIGGIDD------ALTYAASL 537 Query: 247 RKIKDW 252 +++D+ Sbjct: 538 AELEDY 543 >gi|325207025|gb|ADZ02478.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M04-240196] Length = 328 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 10/214 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGSRLKFQQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + GR++TGA+A KVGL+D +G V Q + Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLGNIYSVAQDV 289 >gi|49083774|gb|AAT51140.1| PA2973 [synthetic construct] Length = 327 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 16/230 (6%) Query: 15 LSLVTLTVVYFSWS------SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRD 63 L+ + L VV ++S + H A I ++G I D + ++ + +D Sbjct: 45 LTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALRAAFKD 104 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNI 120 + +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ A++ Sbjct: 105 EGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIASAADQ 164 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A + SLVGSIGV ++KLGV + S K+ PF P+ Q Q Sbjct: 165 IYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEETQFWQQ 224 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+D+++ F+ V + R + + L G +W+G +A ++GLID +G Sbjct: 225 VLDTTHKQFIDSVEKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLG 274 >gi|304322140|ref|YP_003855783.1| protease IV, a signal peptide peptidase [Parvularcula bermudensis HTCC2503] gi|303301042|gb|ADM10641.1| protease IV, a signal peptide peptidase [Parvularcula bermudensis HTCC2503] Length = 643 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 11/219 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 S D +A + + G I D E + ++R A+++ + SPGGS Sbjct: 337 SDPHDKDDKIAVVTVAGAIVDGDERSGAAGGDAVALELKRARTRKDVKAVVLRVDSPGGS 396 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A E I + VK KPVI + +AAS GY IS ++ I ++ ++ GSIGV + Sbjct: 397 VFASEVIRDEVLAVKAAGKPVIVSMGSLAASGGYWISANADEIWSSPVTITGSIGVFSFF 456 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV-QMMQDVVDSSYHWFVRLVSESR 197 P + ++G+S V ++P+ + P+A +++Q V+ Y F+ LV+E R Sbjct: 457 PTFEESFAEIGISTDGVGTTPLTGIYATGVGPLPEAYGEIIQASVEEIYGRFLGLVAEGR 516 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + D ++ GR+W+G +A+++GL+D +G ++ S Sbjct: 517 EMTPDGVDSIAQGRVWSGLDAQRLGLVDRLGTLDDALAS 555 >gi|330813966|ref|YP_004358205.1| macromolecule degradation protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487061|gb|AEA81466.1| macromolecule degradation protein [Candidatus Pelagibacter sp. IMCC9063] Length = 267 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAE 125 A+ ++++SPGGS ++ I+K+ + K V IT ++AAS GY+++CA + I A Sbjct: 48 AVAITINSPGGSPVQSHLLYSLIRKLADEKKVKVITFAEDVAASGGYMLACAGDEIYANA 107 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +S++GSIGV++ + + K GV + + K+ PF E P+ +Q ++ + + Sbjct: 108 SSILGSIGVIYSGFGFQELIKKAGVERRVHTAGTSKSILDPFVEEKPEDIQKLKAIQEEL 167 Query: 186 YHWFVRLVSESR----NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F+ LV SR + DK L G W G+++K++GLID +G +V + + Sbjct: 168 HKEFILLVKNSRKGKITLADDK---LFTGEFWAGSKSKELGLIDGIGNMFQVIEDQFGKD 224 Query: 242 VD-QSIRKIKDWNPPK 256 V ++ K + W K Sbjct: 225 VKVKNFEKQEGWLKKK 240 >gi|15598169|ref|NP_251663.1| peptidase [Pseudomonas aeruginosa PAO1] gi|107102522|ref|ZP_01366440.1| hypothetical protein PaerPA_01003586 [Pseudomonas aeruginosa PACS2] gi|116050975|ref|YP_790200.1| putative peptidase [Pseudomonas aeruginosa UCBPP-PA14] gi|254235947|ref|ZP_04929270.1| hypothetical protein PACG_01902 [Pseudomonas aeruginosa C3719] gi|254241681|ref|ZP_04935003.1| hypothetical protein PA2G_02387 [Pseudomonas aeruginosa 2192] gi|296388534|ref|ZP_06878009.1| putative peptidase [Pseudomonas aeruginosa PAb1] gi|313108158|ref|ZP_07794293.1| putative peptidase [Pseudomonas aeruginosa 39016] gi|9949072|gb|AAG06361.1|AE004723_5 probable peptidase [Pseudomonas aeruginosa PAO1] gi|115586196|gb|ABJ12211.1| putative peptidase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167878|gb|EAZ53389.1| hypothetical protein PACG_01902 [Pseudomonas aeruginosa C3719] gi|126195059|gb|EAZ59122.1| hypothetical protein PA2G_02387 [Pseudomonas aeruginosa 2192] gi|310880795|gb|EFQ39389.1| putative peptidase [Pseudomonas aeruginosa 39016] Length = 326 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 16/230 (6%) Query: 15 LSLVTLTVVYFSWS------SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRD 63 L+ + L VV ++S + H A I ++G I D + ++ + +D Sbjct: 45 LTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALRAAFKD 104 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNI 120 + +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ A++ Sbjct: 105 EGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIASAADQ 164 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A + SLVGSIGV ++KLGV + S K+ PF P+ Q Q Sbjct: 165 IYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEETQFWQQ 224 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+D+++ F+ V + R + + L G +W+G +A ++GLID +G Sbjct: 225 VLDTTHKQFIDSVKKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLG 274 >gi|121635773|ref|YP_976018.1| putative protease [Neisseria meningitidis FAM18] gi|120867479|emb|CAM11256.1| putative protease [Neisseria meningitidis FAM18] gi|325131359|gb|EGC54070.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M6190] gi|325137388|gb|EGC59976.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis ES14902] Length = 328 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYADSSSIVGSIGVIGSSFDATELM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|325141318|gb|EGC63806.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis 961-5945] gi|325199204|gb|ADY94660.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis G2136] Length = 328 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYADSSSIVGSIGVIGSSFDATELM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|296313748|ref|ZP_06863689.1| signal peptide peptidase SppA [Neisseria polysaccharea ATCC 43768] gi|296839673|gb|EFH23611.1| signal peptide peptidase SppA [Neisseria polysaccharea ATCC 43768] Length = 328 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 10/214 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + GR++TGA+A KVGL+D +G V Q + Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLGNIYSVAQDV 289 >gi|254428559|ref|ZP_05042266.1| peptidase, S49 (protease IV) family [Alcanivorax sp. DG881] gi|196194728|gb|EDX89687.1| peptidase, S49 (protease IV) family [Alcanivorax sp. DG881] Length = 324 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 20/242 (8%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSA 66 ++ L + + V+ S V HV + + G I Q+ ++ + R ++ Sbjct: 45 FIYLFTLLVMVIPGKTGSAVTMAEEHVGIVDVNGVIAPDQDASADLIVTGLTRAFEAENT 104 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 TA+++ ++SPGGS ++ AI++++ P V + ++ AS Y I+ A++ I A Sbjct: 105 TAVLLKINSPGGSPVQSNQVYNAIKRLRAEYPDKKVYAAITDVGASGAYFIASAADEIYA 164 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S+VGSIGV+ ++ DKLGV + + + K PFS + P + +Q ++D Sbjct: 165 DPASIVGSIGVIMAGFGLEQAADKLGVERRVLTAGENKDLMDPFSPIQPAHRKHVQTMLD 224 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLID----------VVGGQE 231 + F+ V E R + D L G WTG A +GLID V GQE Sbjct: 225 DIHQQFITAVKEGRGDRLKVDSHPELFSGLFWTGERALDLGLIDGLMSPGQVIREVAGQE 284 Query: 232 EV 233 E+ Sbjct: 285 EM 286 >gi|48477283|ref|YP_022989.1| putative signal peptide peptidase SppA [Picrophilus torridus DSM 9790] gi|48429931|gb|AAT42796.1| putative signal peptide peptidase SppA [Picrophilus torridus DSM 9790] Length = 247 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 5/191 (2%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 LI+ ++S GG A A E ++ + V KPV + + AS Y ++CA+ I A TS Sbjct: 35 GLILIINSGGGDANATEILYNKLLDVSKSKPVYALIEGIGASGAYWLACAARKIYAMSTS 94 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ P V FL+ LG+ ++ K K SPF +N ++ +++++ + Sbjct: 95 IVGSIGVISISPDVSDFLENLGIKMRINKIGKYKDINSPFRHMNEDENEIFKELLNDVFL 154 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F V + RN+ D+ + G +++ + + LID +G + V L A+ D +I+ Sbjct: 155 RFREEVKKRRNLTDDEINDTATGLVFSARQGLERKLIDGIGTFDTV---LNAIKNDNNIK 211 Query: 248 --KIKDWNPPK 256 KIK+ P K Sbjct: 212 TAKIKNLTPRK 222 >gi|161870990|ref|YP_001600170.1| protease IV [Neisseria meningitidis 053442] gi|161596543|gb|ABX74203.1| protease IV [Neisseria meningitidis 053442] Length = 303 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 51 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 110 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 111 EIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYADSSSIVGSIGVIGSSFDATELM 170 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 171 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 230 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 231 YPDVFSGRVYTGADALKVGLVDGLG 255 >gi|269123729|ref|YP_003306306.1| signal peptide peptidase SppA, 36K type [Streptobacillus moniliformis DSM 12112] gi|268315055|gb|ACZ01429.1| signal peptide peptidase SppA, 36K type [Streptobacillus moniliformis DSM 12112] Length = 547 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 3/184 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 ++ E+ + +++ ++SPGGSA + I+ I+K + PV + +AAS GY I Sbjct: 293 QKFEKAEKTKGIKGIVIRINSPGGSAIEAKQIYNRIRK--SEVPVYISIGNIAASGGYYI 350 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S A N I +SL GSIGV+ P L+KLG++I V+ SP+ ++ + Sbjct: 351 SSAGNKIFINPSSLTGSIGVVSIMPKYSAALNKLGINIDGVEKGKYSNLLSPYKDLTDEE 410 Query: 175 VQMMQDVVDSSYHWFVR-LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q ++S Y F ++ ++ + + ++ G+IW G+EA K+ L++ GG ++ Sbjct: 411 RNIYQRKLESIYSEFKNDILKNNKKLTSESLEEVAQGKIWLGSEAIKLNLVNEFGGLQDT 470 Query: 234 WQSL 237 +L Sbjct: 471 INAL 474 >gi|53720054|ref|YP_109040.1| peptidase [Burkholderia pseudomallei K96243] gi|53725724|ref|YP_102320.1| peptidase, U7 family protein [Burkholderia mallei ATCC 23344] gi|76810646|ref|YP_334296.1| peptidase [Burkholderia pseudomallei 1710b] gi|126451071|ref|YP_001081348.1| peptidase, U7 family protein [Burkholderia mallei NCTC 10247] gi|126452303|ref|YP_001067106.1| peptidase, U7 family protein [Burkholderia pseudomallei 1106a] gi|254177667|ref|ZP_04884322.1| peptidase, U7 family protein [Burkholderia mallei ATCC 10399] gi|254191226|ref|ZP_04897730.1| peptidase, U7 family protein [Burkholderia pseudomallei Pasteur 52237] gi|254195901|ref|ZP_04902327.1| peptidase, U7 family protein [Burkholderia pseudomallei S13] gi|254199213|ref|ZP_04905579.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei FMH] gi|254205520|ref|ZP_04911872.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei JHU] gi|254261915|ref|ZP_04952969.1| peptidase, U7 family protein [Burkholderia pseudomallei 1710a] gi|254296852|ref|ZP_04964305.1| peptidase, U7 family protein [Burkholderia pseudomallei 406e] gi|254357687|ref|ZP_04973960.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei 2002721280] gi|52210468|emb|CAH36451.1| family S49 unassigned peptidase [Burkholderia pseudomallei K96243] gi|52429147|gb|AAU49740.1| peptidase, U7 family protein [Burkholderia mallei ATCC 23344] gi|76580099|gb|ABA49574.1| family S49 unassigned peptidase [Burkholderia pseudomallei 1710b] gi|126225945|gb|ABN89485.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 1106a] gi|126243941|gb|ABO07034.1| peptidase, U7 family protein [Burkholderia mallei NCTC 10247] gi|147748809|gb|EDK55883.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei FMH] gi|147752963|gb|EDK60028.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei JHU] gi|148026814|gb|EDK84835.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei 2002721280] gi|157807338|gb|EDO84508.1| peptidase, U7 family protein [Burkholderia pseudomallei 406e] gi|157938898|gb|EDO94568.1| peptidase, U7 family protein [Burkholderia pseudomallei Pasteur 52237] gi|160698706|gb|EDP88676.1| peptidase, U7 family protein [Burkholderia mallei ATCC 10399] gi|169652646|gb|EDS85339.1| peptidase, U7 family protein [Burkholderia pseudomallei S13] gi|254220604|gb|EET09988.1| peptidase, U7 family protein [Burkholderia pseudomallei 1710a] Length = 333 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D H A + I G+I +++++ Sbjct: 48 RIFFRFAFLAV--LGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTA 105 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 106 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 165 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 166 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 225 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 226 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 285 Query: 234 WQSL 237 + + Sbjct: 286 ARDV 289 >gi|121598392|ref|YP_993790.1| peptidase, U7 family protein [Burkholderia mallei SAVP1] gi|251767265|ref|ZP_04820039.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei PRL-20] gi|121227202|gb|ABM49720.1| peptidase, U7 family protein [Burkholderia mallei SAVP1] gi|243063309|gb|EES45495.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei PRL-20] Length = 333 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D H A + I G+I +++++ Sbjct: 48 RIFFRFAFLAV--LGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTA 105 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 106 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 165 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 166 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 225 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 226 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 285 Query: 234 WQSL 237 + + Sbjct: 286 ARDV 289 >gi|170740974|ref|YP_001769629.1| peptidase S49 [Methylobacterium sp. 4-46] gi|168195248|gb|ACA17195.1| peptidase S49 [Methylobacterium sp. 4-46] Length = 287 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 4/176 (2%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVA 123 A AL+++ SPGGSA I I+ + K PV+ V ++AAS GY+I+CA++ IVA Sbjct: 63 AVALVIN--SPGGSAAQSHLIHHRIRALAEEKKLPVLAFVEDVAASGGYMIACAADEIVA 120 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +SLVGSIGV+ + L++LGV + + P KA PF +P V ++ + Sbjct: 121 DPSSLVGSIGVVSAGFGFQGLLERLGVERRVHTTGPSKAMLDPFRPEDPADVARLKGIQA 180 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 F LV R + L G +W+G +A +GL+D +G V ++ Y Sbjct: 181 DIQALFTDLVRARRPSLSGEPADLFSGAVWSGRQALALGLVDALGDLRGVLRARYG 236 >gi|23009603|ref|ZP_00050591.1| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 320 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 12/204 (5%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNI 120 D +A ALI+ +SPGGS IFR I+ + K V V + AAS GY+I+CA++ Sbjct: 60 DVAAVALII--NSPGGSPVQSHLIFRRIRALAAEKKVKVFAFVEDAAASGGYMIACAADE 117 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA SLVGSIGV+ ++++G+ + KA PF NP+ + +++ Sbjct: 118 IVADPASLVGSIGVVSAGFGFDRLIERIGIERRVHTQGEAKAMLDPFRPENPQDIARLKE 177 Query: 181 VVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F LV E R + D+ L G +WTG +A +GL+D +G + Y Sbjct: 178 IQADVQALFTGLVRERRPTLTADRDLF--TGAVWTGRQALDLGLVDALGDLRGTLRERY- 234 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDL 263 G D +R I + + W L Sbjct: 235 -GEDVELRLIAET---RGSWLARL 254 >gi|325143533|gb|EGC65854.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240013] Length = 328 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADSSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|253998978|ref|YP_003051041.1| peptidase S49 [Methylovorus sp. SIP3-4] gi|313201082|ref|YP_004039740.1| peptidase s49 [Methylovorus sp. MP688] gi|253985657|gb|ACT50514.1| peptidase S49 [Methylovorus sp. SIP3-4] gi|312440398|gb|ADQ84504.1| peptidase S49 [Methylovorus sp. MP688] Length = 316 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 8/212 (3%) Query: 34 NSPHVARIAIRGQI-EDSQ----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 NS H A I I G I D Q ++I +E + +I+ ++SPGGS I Sbjct: 63 NSDHTAIIDIYGVIGSDDQVSADDVIGSLESAYENKHTKGIILRINSPGGSPVQAGIIND 122 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I + + P V V ++ AS GY I+ A++ I + S+VGSIGVL + Sbjct: 123 EIHRQRKLHPNIPVYAVVEDICASGGYYIAVAADKIFVDKASIVGSIGVLMDGFGFTGIM 182 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DK+GV + + + KA PFS VNPK + Q +++ + F+ +V E R +T Sbjct: 183 DKVGVERRLLTAGENKAILDPFSPVNPKHKEYAQSMLNQIHQQFIAVVREGRGKRLKETD 242 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G W+G + ++GL D G + V + + Sbjct: 243 DTFSGLFWSGETSVQMGLADGFGSSDYVAREI 274 >gi|34497270|ref|NP_901485.1| serine protease [Chromobacterium violaceum ATCC 12472] gi|34103126|gb|AAQ59489.1| serine protease [Chromobacterium violaceum ATCC 12472] Length = 312 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 7/202 (3%) Query: 34 NSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 H A I + G I E +++I ++ RD +I+ +SPGGS ++ Sbjct: 62 GGGHTAVIELDGAISSENETGKKMISALDHAFRDKGTKGVIIDANSPGGSPVLSGMVYDE 121 Query: 90 IQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++K PV V E+ AS Y I+ A++ I + S+VGSIGVL ++ Sbjct: 122 IRRLKKLHADIPVYVVVSEVCASGCYYIAAAADKIFVDKASIVGSIGVLSDGFGFTGAME 181 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ + + KA PFS NPK + Q ++D +H F++ V R K Sbjct: 182 KLGIDRRLKTAGENKAMGDPFSPPNPKHDAIRQQLLDDIHHQFIQAVETGRGQRLKKDAQ 241 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 G +W G +A +GL D G Sbjct: 242 TFSGMVWLGEKAIPLGLADGYG 263 >gi|67641118|ref|ZP_00439903.1| peptidase, U7 family protein [Burkholderia mallei GB8 horse 4] gi|226199956|ref|ZP_03795506.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei Pakistan 9] gi|242315612|ref|ZP_04814628.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 1106b] gi|225928012|gb|EEH24049.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei Pakistan 9] gi|238521982|gb|EEP85429.1| peptidase, U7 family protein [Burkholderia mallei GB8 horse 4] gi|242138851|gb|EES25253.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 1106b] Length = 305 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D H A + I G+I +++++ Sbjct: 20 RIFFRFAFLAV--LGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTA 77 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 78 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 137 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 138 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 197 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 198 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 257 Query: 234 WQSL 237 + + Sbjct: 258 ARDV 261 >gi|319408201|emb|CBI81854.1| protease [Bartonella schoenbuchensis R1] Length = 283 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 23/234 (9%) Query: 41 IAIRGQIEDSQELIERIERISR----------DDSATALIVSLSSPGGSAYAGEAIFRAI 90 + + G I DS + R + R D A A+++ ++SPGGS IF+ I Sbjct: 23 VRLHGAIMDSNSFMARTLSLGRCAPLLDKAFADKKAPAVVLIINSPGGSPVQSRLIFQRI 82 Query: 91 QKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFL 145 + + N K V+ + ++AAS GY+I+CA + I A +S+VGSIGV+ F +P + L Sbjct: 83 RDLANEKNKQVLVFIEDVAASGGYMIACAGDEIFADPSSVVGSIGVVSASFGFPEL---L 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF V+ ++ + + F+ LV E R Sbjct: 140 KKIGVERRVYTAGKNKVVLDPFQPEKKMGVEHLKSLQLEVHQTFIDLVKERRASKLSDDS 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + G W+G + ++GL+D +G V + + G D +R I +P K+++ Sbjct: 200 DIFTGMFWSGKKGVELGLVDQLGDVRSVIKDRF--GYDTKLRLI---SPSKSFF 248 >gi|254673921|emb|CBA09705.1| signal peptide peptidase SppA, 36K type [Neisseria meningitidis alpha275] Length = 328 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|322380240|ref|ZP_08054461.1| protease IV (PspA) [Helicobacter suis HS5] gi|321147318|gb|EFX41997.1| protease IV (PspA) [Helicobacter suis HS5] Length = 292 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 104/202 (51%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P++A++ + G I +S+ ++I +I ++ S ++ + SPGG+ A + + + Sbjct: 50 PNLAKLYLYGPIFESESFQDQINKILQNPSIKGALLMIDSPGGTISASVELSDMVASLAK 109 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + PV+ V + AS Y ++ I A +L+GSIGV+F + P +DKLG+ + V Sbjct: 110 KMPVVAYVRGVMASGSYYAGMMASKIYANRGALIGSIGVIFSGVNIAPLMDKLGIKTQGV 169 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K + E P+ Q + +++ Y FV V+++R++ ++G+I++ Sbjct: 170 AKGAYKEVGTFMREWTPQEKQYLNGLLNEQYGMFVSDVAKARHLDPKDAPAFAEGKIFSA 229 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 +A + LID V +E ++L Sbjct: 230 KQALFLKLIDRVSTYDEAIKAL 251 >gi|325266561|ref|ZP_08133238.1| signal peptide peptidase SppA [Kingella denitrificans ATCC 33394] gi|324982004|gb|EGC17639.1| signal peptide peptidase SppA [Kingella denitrificans ATCC 33394] Length = 336 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 28/258 (10%) Query: 35 SPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 PH A I + G I L + +E R+ + A+I+ +SPGGS F Sbjct: 83 GPHTAVIDLNGTIGGDNRISQVDMLRQGMEAAYRNKNVRAIIIHANSPGGSPVVSNTAFS 142 Query: 89 AIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K PV +M AS Y I+ A++ I A +SLVGSIGV+ + Sbjct: 143 EIRRIKAEHANIPVYVVAKDMCASGCYYIAAAADKIFADPSSLVGSIGVIGSSFDATGLI 202 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLG+ + + K PF P+ + Q++++ + F++ V E R K L Sbjct: 203 EKLGIRRRVRIAGDNKGMGDPFVPETPEQQAIWQNMLNQIHGEFIKAVREGRG----KRL 258 Query: 206 V------LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD-QSIRKIKDWNPPKNY 258 + + GRI+TG +AKK GLID G ++Y++ D + ++ P KN Sbjct: 259 MEKEFPDMFSGRIFTGIDAKKAGLIDDFG-------NVYSVARDVVKAPNLVNYTPEKND 311 Query: 259 WFCDLKNLSISSLLEDTI 276 L N +++ +E+T+ Sbjct: 312 -LASLLNRHLNNQMEETV 328 >gi|325205076|gb|ADZ00530.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240355] Length = 328 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+I+ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S++GSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIIGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|172060050|ref|YP_001807702.1| peptidase S49 [Burkholderia ambifaria MC40-6] gi|171992567|gb|ACB63486.1| peptidase S49 [Burkholderia ambifaria MC40-6] Length = 330 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSDDAKFASTGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKYPNKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|291060353|gb|ADD73088.1| signal peptide peptidase SppA, 67K type [Treponema pallidum subsp. pallidum str. Chicago] Length = 598 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 100/173 (57%), Gaps = 4/173 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNI 120 D A+++ + S GG +A E I RA+ + K +KPVI + +AAS Y ++ A++ Sbjct: 354 DPDIKAVVLRIDSGGGEVFASERIRRALARAKRRGKKPVIVSMGAIAASGAYWVASAADY 413 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKL-GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ ++ GSIGVL P + FL++ G+++ SV+ ++ +PS + MQ Sbjct: 414 IFASPYTITGSIGVLSVLPTFETFLERYAGITVDSVQVHGVR-QPSLLRSGTAEDTARMQ 472 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V ++Y F+ +VS RN+ D+ +++GRI+ G +A +GL+D +GG +E Sbjct: 473 LDVMATYRTFLSVVSAGRNLTLDRVAAVAEGRIYAGEDAVSLGLVDALGGLDE 525 >gi|194290172|ref|YP_002006079.1| signal peptide peptidase, s49 family [Cupriavidus taiwanensis LMG 19424] gi|193224007|emb|CAQ70016.1| Putative signal peptide peptidase, S49 family [Cupriavidus taiwanensis LMG 19424] Length = 398 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 8/233 (3%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATA 68 +L L+ V F + + H A + + G+I ++ + ++ D +A Sbjct: 122 LLVLILFAVFDFKGDGTITASGRHTAMVTLEGEIAAGTPASAEAINASLQAAFADSNAAG 181 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGS I I +++ KP+ V E+ AS GY ++ A++ I + Sbjct: 182 VILKINSPGGSPVQAGIINDEIHRLRGLYPSKPLYVVVEEICASGGYYVAAAADKIYVDK 241 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S+VGSIGVL +DKLGV + S K PFS PK + ++ Sbjct: 242 ASIVGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPKQKAFAEAMLKQI 301 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + F+ +V E R L G W+G + +GL D +G E V + L+ Sbjct: 302 HQQFIDVVKEGRGDRLKDDPELFSGLFWSGERSVALGLADGLGSAEYVARDLF 354 >gi|15639981|ref|NP_219434.1| protease IV (sppA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189026220|ref|YP_001933992.1| protease IV [Treponema pallidum subsp. pallidum SS14] gi|3323323|gb|AAC26585.1| protease IV (sppA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018795|gb|ACD71413.1| protease IV [Treponema pallidum subsp. pallidum SS14] Length = 598 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 100/173 (57%), Gaps = 4/173 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNI 120 D A+++ + S GG +A E I RA+ + K +KPVI + +AAS Y ++ A++ Sbjct: 354 DPDIKAVVLRIDSGGGEVFASERIRRALARAKRRGKKPVIVSMGAIAASGAYWVASAADY 413 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKL-GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ ++ GSIGVL P + FL++ G+++ SV+ ++ +PS + MQ Sbjct: 414 IFASPYTITGSIGVLSVLPTFETFLERYAGITVDSVQVHGVR-QPSLLRSGTAEDTARMQ 472 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V ++Y F+ +VS RN+ D+ +++GRI+ G +A +GL+D +GG +E Sbjct: 473 LDVMATYRTFLSVVSAGRNLTLDRVAAVAEGRIYAGEDAVSLGLVDALGGLDE 525 >gi|269124167|ref|YP_003306744.1| peptidase S49 [Streptobacillus moniliformis DSM 12112] gi|268315493|gb|ACZ01867.1| peptidase S49 [Streptobacillus moniliformis DSM 12112] Length = 552 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 105/191 (54%), Gaps = 10/191 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++E+IE + + +I+ ++SPGGSA E I++ ++ + P+ + +AAS Sbjct: 307 DDMLEKIESLQEIKNLKGVILRINSPGGSALESERIYKELKNLD--VPIFISMSSVAASG 364 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS---SPMKAEPSPF 167 GY IS + + +++ GSIGV+ YP +K+G++I++V S + + P Sbjct: 365 GYYISTVAKKVFLNPSTITGSIGVVSMYPTFDEISNKVGLNIETVNSGVATEIFDLKQPL 424 Query: 168 S-EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + E+ K +Q M+DV Y F + V +R + + ++ G+IW G EA ++GL D Sbjct: 425 TDELREKLIQSMRDV----YIEFKKHVMTARVMTDEGLEKIAQGKIWLGNEAVEIGLADK 480 Query: 227 VGGQEEVWQSL 237 +GG ++ ++L Sbjct: 481 IGGFDDCLKAL 491 >gi|120609865|ref|YP_969543.1| peptidase S49 [Acidovorax citrulli AAC00-1] gi|120588329|gb|ABM31769.1| peptidase S49 [Acidovorax citrulli AAC00-1] Length = 350 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 7/202 (3%) Query: 34 NSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 ++PH A + I+G+I E S E + R + +DS + A+++ ++SPGGS I Sbjct: 97 STPHTAVVDIKGEIASGAEASAEFVVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIIND 156 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I ++K + KPV V E ASA Y I+ ++ I + S+VGSIGVL ++ Sbjct: 157 EILRLKAKYNKPVYAVVEETCASAAYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTME 216 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS ++ K Q ++D + F+++V + R T Sbjct: 217 KLGVERRLLTAGENKGFLDPFSPMSEKQRTYAQAMLDQIHQQFIQVVQKGRGDRLKPTAD 276 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 G WTG +A +GL D +G Sbjct: 277 TFSGLFWTGQQAVDMGLADHLG 298 >gi|218767314|ref|YP_002341826.1| putative protease [Neisseria meningitidis Z2491] gi|121051322|emb|CAM07607.1| putative protease [Neisseria meningitidis Z2491] gi|319409577|emb|CBY89869.1| putative peptidase [Neisseria meningitidis WUE 2594] gi|325129241|gb|EGC52080.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis OX99.30304] Length = 328 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|325135353|gb|EGC57974.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M0579] gi|325203104|gb|ADY98558.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240149] gi|325208973|gb|ADZ04425.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis NZ-05/33] Length = 328 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 13/227 (5%) Query: 15 LSLVTLTVVYFSWSS---HVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSA 66 L LV L F + N+PH A + + G+I + E L + +E ++ A Sbjct: 54 LILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S++GSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F++ V R + + + + GR++TGA+A KVGL+D +G Sbjct: 234 GIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLVDGLG 280 >gi|115351045|ref|YP_772884.1| peptidase S49 [Burkholderia ambifaria AMMD] gi|115281033|gb|ABI86550.1| peptidase S49 [Burkholderia ambifaria AMMD] Length = 330 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I + +++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSNDAKFASTGRHTALVTIDGEIAAGTNANGEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKYPNKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|15677940|ref|NP_275112.1| putative protease [Neisseria meningitidis MC58] gi|7227382|gb|AAF42435.1| putative protease [Neisseria meningitidis MC58] gi|261393443|emb|CAX51088.1| putative peptidase [Neisseria meningitidis 8013] gi|316984012|gb|EFV62991.1| peptidase family S49 family protein [Neisseria meningitidis H44/76] gi|325127273|gb|EGC50210.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis N1568] gi|325139441|gb|EGC61981.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis CU385] gi|325201167|gb|ADY96622.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis H44/76] Length = 328 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|124386100|ref|YP_001028745.1| peptidase, U7 family protein [Burkholderia mallei NCTC 10229] gi|124294120|gb|ABN03389.1| peptidase, U7 family [Burkholderia mallei NCTC 10229] Length = 333 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D H A + I G+I +++++ Sbjct: 48 RIFFRFAFLAV--LGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTA 105 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 106 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 165 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 166 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 225 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 226 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 285 Query: 234 WQSL 237 + + Sbjct: 286 ARDV 289 >gi|253582352|ref|ZP_04859575.1| protease IV [Fusobacterium varium ATCC 27725] gi|251835891|gb|EES64429.1| protease IV [Fusobacterium varium ATCC 27725] Length = 584 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 8/189 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +IE I + +DD+ +++ ++SPGGSA A I I + KP+ + + AS GY Sbjct: 340 MIEEINKALKDDTVKGIVLRINSPGGSALAANIISNKIVEANGIKPIYVSIGGVGASGGY 399 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP-FSEVN 171 I+ + I A + SL GSIGV+ P +K L + +++ VK K E S +S V Sbjct: 400 YIASVTEKIYADKDSLTGSIGVVSIIPNIKKMLGNVSINVDEVK----KGEYSDIYSMVK 455 Query: 172 PKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + S+ Y+ F+ VS R + ++ G++W G EA ++GL+D +G Sbjct: 456 DFDKDKRDKLYASNLKVYNEFLDTVSFGRKLNRQHVERIAQGKVWLGEEALELGLVDEIG 515 Query: 229 GQEEVWQSL 237 G E + L Sbjct: 516 GLENAIKGL 524 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/193 (18%), Positives = 82/193 (42%), Gaps = 13/193 (6%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 ++GQ + ++ + I RD + +++ L + + E + + I +K K + Sbjct: 80 LKGQDTNFFSMLRAFDSIERDGNIKGVVLKLDNLSLDSAQIEEVGKKIDNLKKSKKEVYS 139 Query: 103 VHEMAASAGYLISCASNII-----VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 M + Y ++ SN I ++A ++ G G L Y K D+LG+ + Sbjct: 140 YMTMVNNRNYSLAIKSNQIFMPPTMSAPVNITGYYGELMYY---KLLADRLGIEFNVIHV 196 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD---KTLVLSDGRI 212 KA ++ + + ++ + + Y+ FV ++ R + +D + ++ D + Sbjct: 197 GDYKAYGENLIKEHISKEYKENIERMYNRKYNNFVNNIAAERKVNHDFINEKILNGDLMV 256 Query: 213 WTGAEAKKVGLID 225 + KK+ L+D Sbjct: 257 SEPNQMKKLNLVD 269 >gi|78065699|ref|YP_368468.1| peptidase S49 [Burkholderia sp. 383] gi|77966444|gb|ABB07824.1| Peptidase S49 [Burkholderia sp. 383] Length = 330 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 11/242 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L+ L ++ FS S + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLAVFVLFAFALIDFSSDSKFSSSGRHTALVTIDGEIAAGVNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRAKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SL 237 + Sbjct: 284 DV 285 >gi|167761166|ref|ZP_02433293.1| hypothetical protein CLOSCI_03571 [Clostridium scindens ATCC 35704] gi|167660832|gb|EDS04962.1| hypothetical protein CLOSCI_03571 [Clostridium scindens ATCC 35704] Length = 325 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 20/219 (9%) Query: 35 SPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSA 80 S ++A + + G I++ Q +E I+ + D + +++ + SPGG+ Sbjct: 53 SDYIAIVRVEGTIQEQASTGIFDIPEGYQHQTTMEYIDDLMEDSNNKGILLYVDSPGGTV 112 Query: 81 YAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y E ++ ++ K +PV + AAS GY++S AS+ I A ++ GSIGV+ Sbjct: 113 YESEELYLKLKDYKEATGRPVWDYMAHYAASGGYMVSMASDKIYANSNTVTGSIGVIMSG 172 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +KLG+ S+ S K S++ + + + Q+ VD Y+ FV +V+E R Sbjct: 173 FDMTGLYEKLGIRYFSITSGEYKDS----SQMTDEQMAIYQEQVDEYYNKFVSIVAEGRG 228 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + L+DGR +T +A GLID + E++ ++ Sbjct: 229 MSEEAVRGLADGRTYTAEQAIDNGLIDSISSFEDMQAAM 267 >gi|325523003|gb|EGD01426.1| protease IV [Burkholderia sp. TJI49] Length = 261 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 11/218 (5%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L+ L+ ++ FS + + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLAVLVLLAFALIDFSSDAKFSSSGRHTALVTIDGEIAAGTNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRAKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMDKLGVQRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 Q+++D + F++ V + R +T + G W Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFW 261 >gi|59802274|ref|YP_208986.1| putative protease [Neisseria gonorrhoeae FA 1090] gi|194099771|ref|YP_002002906.1| putative protease [Neisseria gonorrhoeae NCCP11945] gi|239999952|ref|ZP_04719876.1| putative protease [Neisseria gonorrhoeae 35/02] gi|240017669|ref|ZP_04724209.1| putative protease [Neisseria gonorrhoeae FA6140] gi|240081852|ref|ZP_04726395.1| putative protease [Neisseria gonorrhoeae FA19] gi|240114129|ref|ZP_04728619.1| putative protease [Neisseria gonorrhoeae MS11] gi|240116769|ref|ZP_04730831.1| putative protease [Neisseria gonorrhoeae PID18] gi|240118995|ref|ZP_04733057.1| putative protease [Neisseria gonorrhoeae PID1] gi|240122467|ref|ZP_04735423.1| putative protease [Neisseria gonorrhoeae PID332] gi|240126684|ref|ZP_04739570.1| putative protease [Neisseria gonorrhoeae SK-92-679] gi|240127179|ref|ZP_04739840.1| putative protease [Neisseria gonorrhoeae SK-93-1035] gi|254493478|ref|ZP_05106649.1| protease [Neisseria gonorrhoeae 1291] gi|260441561|ref|ZP_05795377.1| putative protease [Neisseria gonorrhoeae DGI2] gi|268595758|ref|ZP_06129925.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268597949|ref|ZP_06132116.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268600201|ref|ZP_06134368.1| protease [Neisseria gonorrhoeae MS11] gi|268602442|ref|ZP_06136609.1| protease [Neisseria gonorrhoeae PID18] gi|268604710|ref|ZP_06138877.1| protease [Neisseria gonorrhoeae PID1] gi|268681058|ref|ZP_06147920.1| protease [Neisseria gonorrhoeae PID332] gi|268685263|ref|ZP_06152125.1| protease [Neisseria gonorrhoeae SK-92-679] gi|268685537|ref|ZP_06152399.1| protease [Neisseria gonorrhoeae SK-93-1035] gi|291044926|ref|ZP_06570635.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293398003|ref|ZP_06642209.1| protease IV [Neisseria gonorrhoeae F62] gi|59719169|gb|AAW90574.1| putative protease [Neisseria gonorrhoeae FA 1090] gi|193935061|gb|ACF30885.1| putative protease [Neisseria gonorrhoeae NCCP11945] gi|226512518|gb|EEH61863.1| protease [Neisseria gonorrhoeae 1291] gi|268549147|gb|EEZ44565.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268551737|gb|EEZ46756.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268584332|gb|EEZ49008.1| protease [Neisseria gonorrhoeae MS11] gi|268586573|gb|EEZ51249.1| protease [Neisseria gonorrhoeae PID18] gi|268588841|gb|EEZ53517.1| protease [Neisseria gonorrhoeae PID1] gi|268621342|gb|EEZ53742.1| protease [Neisseria gonorrhoeae PID332] gi|268625547|gb|EEZ57947.1| protease [Neisseria gonorrhoeae SK-92-679] gi|268625821|gb|EEZ58221.1| protease [Neisseria gonorrhoeae SK-93-1035] gi|291011820|gb|EFE03816.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611949|gb|EFF41018.1| protease IV [Neisseria gonorrhoeae F62] gi|317165248|gb|ADV08789.1| putative protease [Neisseria gonorrhoeae TCDC-NG08107] Length = 328 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGKIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|330900160|gb|EGH31579.1| peptidase S49, SppA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 332 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 10/222 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S + A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSYTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ V + R + + L G IWTG +A +GL+D +G Sbjct: 239 FIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLG 280 >gi|145220224|ref|YP_001130933.1| signal peptide peptidase SppA, 36K type [Prosthecochloris vibrioformis DSM 265] gi|145206388|gb|ABP37431.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium phaeovibrioides DSM 265] Length = 604 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 12/233 (5%) Query: 15 LSLVTLTV-VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSL 73 L+LVT++ + + S VED V GQI + ++R D + A++V + Sbjct: 305 LALVTISGPIVPTGSEGVEDMGEGVGE----GQIRRA------LDRALADKNIRAIVVRI 354 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A ++ + +KP++ + +AAS GY+ + A I A+ ++ GSIG Sbjct: 355 DSPGGDAMASASMLEMLDSAAVKKPLVVSMSGVAASGGYMAALAGKTIYASPLTITGSIG 414 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V P + +K G+ V S F ++ + +M + Y FV V Sbjct: 415 VYALKPEISGLAEKTGLGRSVVTRGRYADANSLFKPLDREEYRMFVEASGEIYRDFVAKV 474 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQS 245 + SR + + L+ GR+WTG A VGL+D GG + + L G+D + Sbjct: 475 AASRTLSFAGADSLAGGRVWTGKRALAVGLVDRSGGLFDALREAQRLAGIDST 527 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 60/281 (21%), Positives = 117/281 (41%), Gaps = 34/281 (12%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED------------------SQELI 54 ++ SL+ L V+F S V I + G + + QEL+ Sbjct: 22 IVFSLLALAAVFFLQRSRSALPERFVLHIPLTGTVREHSSRSGALPFLVPMEPLSQQELL 81 Query: 55 ERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 + R S D A+++S+ A GE + +I+ V+ + + L Sbjct: 82 FMLRRASGDSRVEAVLLSIDGLRAAPAKIGE-LRASIEAVRKGGKRVIAFLRSPEDSDCL 140 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVN 171 ++ A + I+ A+ S + G+ + Y K L K+GVS ++ + K+ P+ S + Sbjct: 141 LASACDSIIVAKGSFMLLDGLRAETLYYKTALAKIGVSFQAAQWKEYKSGVEPYVRSSPS 200 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P++ + + +++D Y ++ VS R + P +++ + T EA ++ L+D G Sbjct: 201 PQSRERLGELLDDVYGEYLGYVSRRRAMAPETLERIVNTRPLMTAEEAIRLKLVD---GT 257 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNY--WFCDLKNLSIS 269 WQ ++ S+ K P+ +F D + S S Sbjct: 258 VPAWQ------LEPSLEKTMTGRLPEEESDFFVDGRRYSAS 292 >gi|256820055|ref|YP_003141334.1| signal peptide peptidase SppA, 67K type [Capnocytophaga ochracea DSM 7271] gi|256581638|gb|ACU92773.1| signal peptide peptidase SppA, 67K type [Capnocytophaga ochracea DSM 7271] Length = 590 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 95/185 (51%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 R +I ++ +I + + S + A+++ ++SPGG A A E + R I+ K +K V + Sbjct: 325 RAEIVGNETIIRALRKASDNKDIKAIVLRINSPGGDALASELMHREIEVTKKKKKVYVSM 384 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 AAS GY I+C +N I A ++ GSIGV P V G++ ++V + P Sbjct: 385 GNYAASGGYYIACNANRIFAEAGTITGSIGVFGVIPNVNALATNWGINAETVSTHPNAQF 444 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S F + + + M + ++ Y F+ V++ R + ++ GR+W+G EA GL Sbjct: 445 YSVFQKPTEQFKKEMTESIEQVYTVFLDRVAKGRGKTVAQIDSIAQGRVWSGKEALANGL 504 Query: 224 IDVVG 228 +D +G Sbjct: 505 VDEIG 509 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 8/183 (4%) Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 S + GG A+A E + +A++ K + + + Y + ++ + ++ V Sbjct: 106 STGNIGGLAFAQE-LRKALEDFKTSGKFVLAYSDEISQLDYYLQTVADKVYISQLGSVAL 164 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWF 189 G+ + + K +K GV ++ ++ K+ PF ++++ + + +++ + ++ Sbjct: 165 RGLSSEVLFFKGLQEKSGVQMEVIRHGKYKSAVEPFLDNKMSDNNRKQLTELLSAMWNVI 224 Query: 190 VRLVSESRNIPYDKTLVLS---DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 V +++SRNIP +K ++ GR T AK GLID + ++E Q + +SI Sbjct: 225 VTDIAKSRNIPVEKLNEIATNVGGR--TAQLAKNNGLIDGILFRDEFEQIICDKTGSKSI 282 Query: 247 RKI 249 K+ Sbjct: 283 DKV 285 >gi|194335792|ref|YP_002017586.1| signal peptide peptidase SppA, 36K type [Pelodictyon phaeoclathratiforme BU-1] gi|194308269|gb|ACF42969.1| signal peptide peptidase SppA, 36K type [Pelodictyon phaeoclathratiforme BU-1] Length = 597 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 5/240 (2%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ D + L ++ D + AL+V + SPGG A A + + + +KP++ + Sbjct: 319 GEGIDIEMLKNSLDAALEDKAVKALVVRIDSPGGDALASADMLQMLDSAAVKKPLVVSMS 378 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY+ + A I A ++ GSIGV P + +K+G+ V Sbjct: 379 GVAASGGYMAALAGKTIFAQPLTITGSIGVYALKPNISGLAEKIGLGRDVVTRGQYADAS 438 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +PF + +A Y FV V+ SR + ++ GR+WTG+ A K GL+ Sbjct: 439 TPFKPLEGQAYNKFVGASGEIYDDFVGKVAASRKMSIAAVDSVAGGRVWTGSRAMKAGLV 498 Query: 225 DVVGGQEE---VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 D +GG + Q L + + + ++ I P + WF L +SL + +KQ Sbjct: 499 DRMGGLFDAIHAAQQLAKMDMGKKLQII--LYPEQKSWFESLLQGRSASLSDRFAAAVKQ 556 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 30/140 (21%), Positives = 68/140 (48%), Gaps = 3/140 (2%) Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A++KV+ +T A A YL++ A N I+A + G+ + + L KL Sbjct: 113 AVEKVRKGGKKVTAFLRSAEDADYLLATACNSIIAERGGFLLLDGLKVESLFYTSPLGKL 172 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TL 205 GV +++ + K+ PF + + + ++ + ++D Y ++ VS+ R + Sbjct: 173 GVQVQAAQWKKYKSGIEPFVRTGASKEYLEQINALLDEFYDDYLGYVSKRRGMSRSSFEA 232 Query: 206 VLSDGRIWTGAEAKKVGLID 225 ++++ + + +A+ +GL+D Sbjct: 233 LINNDPLVSAKKAQTLGLVD 252 >gi|15618523|ref|NP_224809.1| protease [Chlamydophila pneumoniae CWL029] gi|15836145|ref|NP_300669.1| protease [Chlamydophila pneumoniae J138] gi|16752427|ref|NP_444686.1| protease IV, putative [Chlamydophila pneumoniae AR39] gi|4376909|gb|AAD18752.1| Protease [Chlamydophila pneumoniae CWL029] gi|7189070|gb|AAF38017.1| protease IV, putative [Chlamydophila pneumoniae AR39] gi|8978985|dbj|BAA98820.1| protease [Chlamydophila pneumoniae J138] Length = 333 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 14/220 (6%) Query: 34 NSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +P +A I ++ I S Q ++E E+ D +++ + PGG + + I Sbjct: 60 TAPIIAVIEMKDVIASSKNTAKTIQNILEGFEKAPLKDRVKGIVIDMDCPGGEVFEIDRI 119 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VK 142 + ++ K RK P+ V+ + AS GY +SCA+ I A +SL+GSIGV P+ VK Sbjct: 120 YSMLRFWKERKGFPIYIYVNGLCASGGYYVSCAATKIYATSSSLIGSIGVR-SGPFFNVK 178 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L++ GV + + KA +P++ + Q +D Y FV +V+++R + Sbjct: 179 EGLNRYGVESDLLTAGKDKAPMNPYTPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTK 238 Query: 203 KTLVLSDG-RIWTGAEAKKVGLIDVVGG-QEEVWQSLYAL 240 + LV + G RI++ +AK+ G IDVVG +E+V Q + A+ Sbjct: 239 EKLVHTLGARIFSPEKAKQEGYIDVVGATKEQVLQDIVAV 278 >gi|325262473|ref|ZP_08129210.1| peptidase, U7 family [Clostridium sp. D5] gi|324032305|gb|EGB93583.1| peptidase, U7 family [Clostridium sp. D5] Length = 335 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 20/208 (9%) Query: 36 PHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSAY 81 P+V +++ G IE L++ I+ + D + + +++ + SPGG+ Y Sbjct: 62 PYVGIVSVYGTIEPQTRTGTFDQPQSYQHLALMDYIDAMMYDPNNSGILLDVDSPGGTTY 121 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 G ++ I + ++ +PV T ++ ASA Y I+ S+ I A ++++ GSIGV+ Sbjct: 122 EGVELYDKIVEYRDATGRPVWTYMNHYGASAAYYIAAPSDRIGANKSTMTGSIGVIMSGY 181 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + +KLG+ SV + K SP N + +++ QD++ Y FV V+E R + Sbjct: 182 DLSGLYEKLGIKYYSVTTGDNKDMSSP----NEEQLEIYQDIIAEEYDRFVGAVAEGRGM 237 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 P L+DGR ++ +A GLID + Sbjct: 238 PDKAVRELADGRPYSAQQAVDNGLIDEI 265 >gi|153000814|ref|YP_001366495.1| signal peptide peptidase SppA [Shewanella baltica OS185] gi|151365432|gb|ABS08432.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS185] Length = 615 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 GQI + E + + D AL++ + SPGGSA+A E I + + +K KPV+ + Sbjct: 344 GQI-GGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQIRQELLALKAAGKPVVVSM 402 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS GY IS +++ I A T+L GSIG+ + L +GV V +S A Sbjct: 403 GSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDSLASIGVHTDGVSTSEW-AG 461 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S ++P+ ++Q ++ Y F+ LV++ R + ++ ++ GR+W+G +A ++ L Sbjct: 462 LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQVDKIAQGRVWSGKKALELSL 521 Query: 224 IDVVGGQEE 232 +D +G +E Sbjct: 522 VDELGDLDE 530 >gi|51473588|ref|YP_067345.1| protease [Rickettsia typhi str. Wilmington] gi|51459900|gb|AAU03863.1| probable protease [Rickettsia typhi str. Wilmington] Length = 304 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 6/196 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + KN+ V + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKKNKIKVYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + KA Sbjct: 119 DMAASGGYWLACSGDKIYALPSSVIGSIGVISSGFGFHEAINKLGIERRVYTEGKNKAVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++D+ Y F+ V E R + +L +G W G A GL Sbjct: 179 DPFKPINKDDLKIIKDLQKQVYEHFIEYVKERRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVGGQEEVWQSLYA 239 ID +G V + + Sbjct: 239 IDGIGDMYSVMKEKFG 254 >gi|262068058|ref|ZP_06027670.1| protease IV [Fusobacterium periodonticum ATCC 33693] gi|291378237|gb|EFE85755.1| protease IV [Fusobacterium periodonticum ATCC 33693] Length = 551 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 113/209 (54%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAVINLEGEIDIRESRETVINYDNVVEKLDALEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A+ +L GSIGV+ YP +DKL Sbjct: 345 KLKKLE--IPIYISMGDLCASGGYYIATVGKKLFASPVTLTGSIGVVILYPEFSEAIDKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V E+RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIVYSMNEVYSEFKAHVMEARNINEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 463 GGRVWLGSQAKENGLVDELGTLNDCIDSL 491 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G ++ PY K L LGV++ ++ K FS ++ + + + ++ ++ + F+ Sbjct: 154 GYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFSHDKMTEEKKESLMNIKETLFQNFI 213 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 LV E R + ++ D +AK++GLID V EE+ Sbjct: 214 NLVKEKRKVDITNEILSGDLIFANSEKAKELGLIDGVSTYEEI 256 >gi|315225469|ref|ZP_07867282.1| signal peptide peptidase SppA [Capnocytophaga ochracea F0287] gi|314944567|gb|EFS96603.1| signal peptide peptidase SppA [Capnocytophaga ochracea F0287] Length = 590 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 95/185 (51%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 R +I ++ +I + + S + A+++ ++SPGG A A E + R I+ K +K V + Sbjct: 325 RAEIVGNETIIRALRKASDNKDIKAIVLRINSPGGDALASELMHREIEVTKKKKKVYVSM 384 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 AAS GY I+C +N I A ++ GSIGV P V G++ ++V + P Sbjct: 385 GNYAASGGYYIACNANRIFAEAGTITGSIGVFGVIPNVNALATNWGINAETVSTHPNAQF 444 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S F + + + M + ++ Y F+ V++ R + ++ GR+W+G EA GL Sbjct: 445 YSVFQKPTEQFKKEMTESIEQVYTVFLDRVAKGRGKTVAQIDSIAQGRVWSGKEALANGL 504 Query: 224 IDVVG 228 +D +G Sbjct: 505 VDEIG 509 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 8/183 (4%) Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 S + GG A+A E + +A++ K + + + Y + ++ + ++ V Sbjct: 106 STGNIGGLAFAQE-LRKALEDFKTSGKFVLAYSDEISQLDYYLQTVADKVYISQLGSVAL 164 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWF 189 G+ + + K +K GV ++ ++ K+ PF ++++ + + +++ + ++ Sbjct: 165 RGLSSEVLFFKGLQEKSGVQMEVIRHGKYKSAVEPFLDNKMSDNNRKQLTELLSAMWNVI 224 Query: 190 VRLVSESRNIPYDKTLVLS---DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 V +++SRNIP +K ++ GR T AK GLID + ++E Q + +SI Sbjct: 225 VTDIAKSRNIPVEKLNEIATNVGGR--TAQLAKNNGLIDGILFRDEFEQIICDKTGSKSI 282 Query: 247 RKI 249 K+ Sbjct: 283 DKV 285 >gi|121602669|ref|YP_988704.1| S49 family peptidase [Bartonella bacilliformis KC583] gi|120614846|gb|ABM45447.1| peptidase, S49 family [Bartonella bacilliformis KC583] Length = 283 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%) Query: 41 IAIRGQIEDSQELIERIERISR----------DDSATALIVSLSSPGGSAYAGEAIFRAI 90 + + G I DS L+ R +SR D A A+ + ++SPGGS IF+ I Sbjct: 23 VRLHGAIMDSTSLMARTLSLSRCADLLDKAFSDKRAPAVALVINSPGGSPVQSRLIFQRI 82 Query: 91 QKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFL 145 + + + +K V+ V ++AAS GY+I+CA + I A TS+VGSIGV+ F +P + L Sbjct: 83 RDLADEKKKQVLVFVEDVAASGGYMIACAGDEIFADATSIVGSIGVVSASFGFPEL---L 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ + + F+ LV E R Sbjct: 140 KKIGVERRIYTAGKNKVILDPFQPEKKTGIDHLKSLQLEVHQTFIDLVKERRESKLSDDP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF----- 260 + G WTG +GLID +G V + + D++ K++ +P K+ Sbjct: 200 DIFTGMFWTGKRGIGLGLIDGLGDVRSVVKERFG---DKT--KLRLISPSKSLLGPKTPS 254 Query: 261 ---CDLKNLSISSLL 272 D+ N+++ SLL Sbjct: 255 GISADVVNMAVDSLL 269 >gi|145225602|ref|YP_001136280.1| signal peptide peptidase SppA, 67K type [Mycobacterium gilvum PYR-GCK] gi|145218088|gb|ABP47492.1| signal peptide peptidase SppA, 67K type [Mycobacterium gilvum PYR-GCK] Length = 595 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 26/243 (10%) Query: 73 LSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGGS A E I+R + + + + PV+ + +AAS GY +S A++ IVA ++ GS Sbjct: 355 VDSPGGSVTASETIWREVVRARESGTPVVASMGSVAASGGYYVSMAADAIVANPATITGS 414 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP----SPFSEVNPKAVQMMQDVVDSSYH 187 IGV+ + ++LGV SV+++ A+ +PF+E V D+ Y Sbjct: 415 IGVVTGKLVARDLKERLGVGSDSVRTN-ANADAWSINAPFTEEQHAQVAAEADLF---YD 470 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ-- 244 FV V+E R + D ++ GR+WTGA+A GL+D +GG AL G+D+ Sbjct: 471 DFVARVAEGRGLSVDAVEKVARGRVWTGADALDRGLVDELGGLRTAVTRAKALAGIDEDT 530 Query: 245 ----------SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK--VQGLWAVW- 291 S+R + P L L + ++ ++ QT+ + G+ A+W Sbjct: 531 KVELQMLPGASLRDVLRPKPSSQPAAASLPELLGALAIQSVAGVVDQTQRSLSGVNALWT 590 Query: 292 -NP 293 NP Sbjct: 591 GNP 593 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 11/219 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +E + + R + D LI + + A + + AI +KP + + Sbjct: 65 REAVSALHRAAEDPRVAGLIARVQIDAAAPGAVQELREAIVAFTAKKPSLAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ A + + +G +G +++ LDKLGV + + K+ P+ F+E Sbjct: 125 SYYLASAFGEVWMQPSGTLGLVGFATNALFLRDALDKLGVEAQFIAKGEYKSAPNLFTED 184 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 D +V+ V+ SR I L+D +A GLID VG Sbjct: 185 RYTEPHREADTALVNGLRTQVWDAVAASRGIDVATLDALADRAPLLRDDAVTAGLIDRVG 244 Query: 229 GQEEVWQSLYAL-GVD--------QSIRKIKDWNPPKNY 258 ++E + + + G D I D PP+ Y Sbjct: 245 FRDEAYARIADMAGADGVSPETGSGGIDPDGDDAPPRLY 283 >gi|310821606|ref|YP_003953964.1| Signal peptide peptidase SppA [Stigmatella aurantiaca DW4/3-1] gi|309394678|gb|ADO72137.1| Signal peptide peptidase SppA [Stigmatella aurantiaca DW4/3-1] Length = 578 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 2/191 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S +++ + RD A A+++ ++SPGGSA A E I AIQ+V +KPVI V ++AAS Sbjct: 331 SDAVVKAVRAAGRDKRAKAVVLYINSPGGSALASELILEAIQRVARKKPVIAYVDQVAAS 390 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+ + + I ++ ++VGSIGV + LG+ + S Sbjct: 391 GGYMAALGAQEIWSSPHAVVGSIGVFAGKFEASGLMAHLGIHRTLLTRGENAGIFSVSRG 450 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 P ++ V+ +Y F+ V+++R ++ +GR+++G GL+D VG Sbjct: 451 FTPHERASLEAEVEETYQAFLAHVAKARRRTTEEIHARGEGRVYSGTRGLAAGLVDRVGS 510 Query: 230 QEEVWQSLYAL 240 EE + YAL Sbjct: 511 FEEACR--YAL 519 >gi|83945422|ref|ZP_00957770.1| signal peptide peptidase SppA [Oceanicaulis alexandrii HTCC2633] gi|83851256|gb|EAP89113.1| signal peptide peptidase SppA [Oceanicaulis alexandrii HTCC2633] Length = 598 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGS A + I+ A+ + + PVI + MAAS GY I+ ++ I+A ++ Sbjct: 350 IILRIDSPGGSPIASDQIWDAVMRARQSGTPVIASMGAMAASGGYYIAAPADRIIANAST 409 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSV----KSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 L GSIG+ + L ++G++++ + + + ++ P+SE + + + V Sbjct: 410 LTGSIGMFGGKFVIDEALGRVGLNLEPLHVGGEYALAQSVSQPWSEAQEAGYRALAEDV- 468 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYAL 240 Y F R +E R++P + L+ GR+WTG +A ++GL+D +GG + Q L L Sbjct: 469 --YEDFTRRAAEGRDLPLARIQTLARGRVWTGRQALELGLVDEIGGFDAALASAQELAGL 526 Query: 241 GVDQSIR 247 +Q +R Sbjct: 527 SANQPVR 533 >gi|315445955|ref|YP_004078834.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. Spyr1] gi|315264258|gb|ADU01000.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. Spyr1] Length = 595 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 26/243 (10%) Query: 73 LSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGGS A E I+R + + + + PV+ + +AAS GY +S A++ IVA ++ GS Sbjct: 355 VDSPGGSVTASETIWREVVRARESGTPVVASMGSVAASGGYYVSMAADAIVANPATITGS 414 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP----SPFSEVNPKAVQMMQDVVDSSYH 187 IGV+ + ++LGV SV+++ A+ +PF+E V D+ Y Sbjct: 415 IGVVTGKLVARDLKERLGVGSDSVRTN-ANADAWSINAPFTEEQHAQVAAEADLF---YD 470 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ-- 244 FV V+E R + D ++ GR+WTGA+A GL+D +GG AL G+D+ Sbjct: 471 DFVARVAEGRGLSIDAVEQVARGRVWTGADALDRGLVDELGGLRTAVTRAKALAGIDEDT 530 Query: 245 ----------SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK--VQGLWAVW- 291 S+R + P L L + ++ ++ QT+ + G+ A+W Sbjct: 531 KVELQMLPGASLRDVLRPKPSSQPAAASLPELLGALAIQSVAGVVDQTQRSLSGVNALWT 590 Query: 292 -NP 293 NP Sbjct: 591 GNP 593 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 11/219 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +E + + R + D LI + + A + + AI +KP + + Sbjct: 65 REAVSALHRAAEDPRVAGLIARVQIDAAAPGAVQELREAIVAFTAKKPSLAWAETYPGTL 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ A + + +G +G +++ LDKLGV + + K+ P+ F+E Sbjct: 125 SYYLASAFGEVWMQPSGTLGLVGFATNALFLRDALDKLGVEAQFIAKGEYKSAPNLFTED 184 Query: 171 NPKAVQMMQD--VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 D +V+ V+ SR I L+D +A GLID VG Sbjct: 185 RYTEPHREADTALVNGLRTQVWDAVAASRGIDVATLDALADRAPLLRDDAVTAGLIDRVG 244 Query: 229 GQEEVWQSLYAL-GVD--------QSIRKIKDWNPPKNY 258 ++E + + + G D I D PP+ Y Sbjct: 245 FRDEAYARIADMAGADGVSPETGSGGIDPDGDDAPPRLY 283 >gi|110633065|ref|YP_673273.1| peptidase S49 [Mesorhizobium sp. BNC1] gi|110284049|gb|ABG62108.1| peptidase S49 [Chelativorans sp. BNC1] Length = 286 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 16/237 (6%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIV 122 SA A+ +S++SPGGS I+R I+ + + +K V V ++AAS GY+I+ A + I+ Sbjct: 56 SAPAVAISINSPGGSPVQSRLIYRRIRDLAEERKKNVFVFVEDIAASGGYMIALAGDEII 115 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + +S+VGSIGV+ + + K+GV + S KA PF + V+ ++ + Sbjct: 116 SDPSSIVGSIGVVSAGFGFQDLIKKIGVERRVHTSGRNKAILDPFQPEKEEDVERLKALQ 175 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + + F+ LV E R L G WTG +GL+D VG + Y Sbjct: 176 EEVHQTFISLVRERRGAKLANDDDLFTGLFWTGERGLSLGLVDAVGDMRSFLKHRYG--- 232 Query: 243 DQSIRKIKDWNPPK-------NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 ++K +PP+ ++ D+K I++ L++ + Q LW + Sbjct: 233 --EKTRLKLVSPPRGLFGRRLGFFGLDMKETDIAAAAASG--LVQALEEQALWRRYG 285 >gi|170077749|ref|YP_001734387.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7002] gi|169885418|gb|ACA99131.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7002] Length = 594 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 96/178 (53%), Gaps = 1/178 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L ++ + +D +++ ++SPGGSA A E I R ++ ++ KPVI + ++AAS G Sbjct: 335 LSRQLRELRQDPEVKVVVLRINSPGGSAIASEIILRELKLIREADKPVIVSMGDLAASGG 394 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ S+ I A ++ GSIGV P ++ + G++ SV++ + + Sbjct: 395 YWIATESDRIFAQPNTITGSIGVFGILPNIQTIGNNNGLTWDSVQTGELANLGTASRPKT 454 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + Q+ V+ Y F+ VS +R + + ++ GR+W+G +A+ + L+D +GG Sbjct: 455 EAEMAIFQNFVNDIYGKFLDRVSAARGLTEAEVRQIAQGRVWSGEDAQAIRLVDELGG 512 >gi|326316008|ref|YP_004233680.1| peptidase S49 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372844|gb|ADX45113.1| peptidase S49 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 7/202 (3%) Query: 34 NSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 ++PH A + I+G+I E S E + R + +DS + A+++ ++SPGGS I Sbjct: 97 STPHTAVVDIKGEIASGAEASAEFVVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIIND 156 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I ++K + KPV V E ASA Y I+ ++ I + S+VGSIGVL ++ Sbjct: 157 EIIRLKAKYNKPVYAVVEETCASAAYYIAAGADQIFVDKASIVGSIGVLMDGFGFTGTME 216 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS ++ K Q ++D + F+ +V + R T Sbjct: 217 KLGVERRLLTAGENKGFLDPFSPMSEKQRTYAQAMLDQIHQQFIHVVQKGRGDRLKPTAD 276 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 G WTG +A +GL D +G Sbjct: 277 TFSGLFWTGQQAVDMGLADHLG 298 >gi|289582267|ref|YP_003480733.1| signal peptide peptidase SppA, 36K type [Natrialba magadii ATCC 43099] gi|289531820|gb|ADD06171.1| signal peptide peptidase SppA, 36K type [Natrialba magadii ATCC 43099] Length = 334 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 5/195 (2%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 R Q + +++E+I+R D++ AL++ L++PGG + I A ++ P + Sbjct: 90 RPQSTPADDIVEQIDRADEDENVDALLLKLNTPGGEVVPSDDIRLAAERFDG--PTVAYT 147 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +++ AS GY I+ + + A + S+VGSIGV+ +K+G+S + + K Sbjct: 148 NDVCASGGYWIASGCDALWARDGSIVGSIGVIGSRVNASDLAEKVGLSYERFAAGEFKDA 207 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVG 222 +P E+ +Q ++D Y FV VS+ R++ D V ++ RI+ G EA ++G Sbjct: 208 GTPLKELEEDERAYLQGLIDDYYETFVDRVSDGRDM--DPEFVRDTEARIYLGEEAHELG 265 Query: 223 LIDVVGGQEEVWQSL 237 L+D +G + ++ L Sbjct: 266 LVDELGTRRDLEDEL 280 >gi|33241968|ref|NP_876909.1| proteinase IV [Chlamydophila pneumoniae TW-183] gi|33236478|gb|AAP98566.1| proteinase IV [Chlamydophila pneumoniae TW-183] Length = 330 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 14/220 (6%) Query: 34 NSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +P +A I ++ I S Q ++E E+ D +++ + PGG + + I Sbjct: 57 TAPIIAVIEMKDVIASSKNTAKTIQNILEGFEKAPLKDRVKGIVIDMDCPGGEVFEIDRI 116 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VK 142 + ++ K RK P+ V+ + AS GY +SCA+ I A +SL+GSIGV P+ VK Sbjct: 117 YSMLRFWKERKGFPIYIYVNGLCASGGYYVSCAATKIYATSSSLIGSIGVR-SGPFFNVK 175 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L++ GV + + KA +P++ + Q +D Y FV +V+++R + Sbjct: 176 EGLNRYGVESDLLTAGKDKAPMNPYTPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTK 235 Query: 203 KTLVLSDG-RIWTGAEAKKVGLIDVVGG-QEEVWQSLYAL 240 + LV + G RI++ +AK+ G IDVVG +E+V Q + A+ Sbjct: 236 EKLVHTLGARIFSPEKAKQEGYIDVVGATKEQVLQDIVAV 275 >gi|117924863|ref|YP_865480.1| signal peptide peptidase SppA, 36K type [Magnetococcus sp. MC-1] gi|117608619|gb|ABK44074.1| signal peptide peptidase SppA, 36K type [Magnetococcus sp. MC-1] Length = 350 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 118/227 (51%), Gaps = 11/227 (4%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSA 66 Y++ ++ L F S + PHVA + + G I D+ E+I+ ++ +D++ Sbjct: 73 YLVATMALLNRGDFEEGSSASASEPHVAVVKMVGAIMPESDLDADEVIKNLQEAFKDENT 132 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ ++SPGGS I+ I +++ V + ++ AS GY ++ A++ I A Sbjct: 133 KAVVLRINSPGGSPVQAGMIYDEIVRLRAEHKEIKVYAALEDLCASGGYYVAAAADEIYA 192 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +LVGSIGV+ + ++ +++G+ +++ + KA P + V+ Q +++ Sbjct: 193 DKATLVGSIGVIMKGFGLEKLAEQVGLENRTLTAGNHKAFLDPLAPVDSAEKAHAQGLLN 252 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ +V + R + D L +G IWTG +A +GL+D +G Sbjct: 253 QIHAQFIEVVKKGRGKRLKADDD-KLFNGLIWTGEQAVTLGLVDGLG 298 >gi|16125179|ref|NP_419743.1| signal peptide peptidase SppA [Caulobacter crescentus CB15] gi|221233913|ref|YP_002516349.1| signal peptide peptidase [Caulobacter crescentus NA1000] gi|13422197|gb|AAK22911.1| signal peptide peptidase SppA [Caulobacter crescentus CB15] gi|220963085|gb|ACL94441.1| signal peptide peptidase [Caulobacter crescentus NA1000] Length = 594 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 2/193 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S ++ + + D A++ +SSPGGS A E I A+Q K KPV+ + AA Sbjct: 326 SDDVAQAFRAATEDKDVKAIVFRVSSPGGSDTASEQILAALQAAKKAGKPVVVSMGTYAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS ++ I+A ++L GSIGV + L + GV K + ++ Sbjct: 386 SGGYWISSQADSIIAQPSTLTGSIGVYGGKFAIGEALARFGVDTKDLHVGADYSQAFGAG 445 Query: 169 E-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 E P+ +D Y F+ V+E RN+P K ++ GR+WTG +AK++GL+D + Sbjct: 446 EGFTPEQRAKFAGWMDRIYAGFITRVAEGRNLPPAKVREIAKGRVWTGEQAKQLGLVDEL 505 Query: 228 GGQEEVWQSLYAL 240 GG E + AL Sbjct: 506 GGYYEAVEKAKAL 518 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 8/184 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASA 110 +IE + R +DD A++V L G + A + + A + + +KP+ + S Sbjct: 75 VIETLRRAEKDDKVKAILVRLPEGGVAPAAADELRLAFKHFREVGKKPIYAHSQGLYPSG 134 Query: 111 ----GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y++ A++ S ++G+ + + K F DK GV + + K +P Sbjct: 135 MVTSTYMLGAATSEFWMQPDSSFQAVGISSESMFFKRFFDKYGVKAEYEQRYEYKNAVNP 194 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + S+ P + + S Y + + R K + +G + EA+ GLI Sbjct: 195 YLHSDYTPAHRESTLSWMGSVYRTALTSAAVDRKQDPTKLMKTLEGGPYIAQEAQAKGLI 254 Query: 225 DVVG 228 D VG Sbjct: 255 DKVG 258 >gi|330502590|ref|YP_004379459.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina NK-01] gi|328916876|gb|AEB57707.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina NK-01] Length = 325 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + H A I IRG I D +E ++ + D + +I+ ++SPGGS I+ Sbjct: 69 TTAHTALIEIRGMIADREEASADKVVGSLRAAFEDTNTKGVILRINSPGGSPVQSGYIYD 128 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPF 144 I++++ P V + ++ AS Y I+ A++ I A + SLVGSIGV + +V+ Sbjct: 129 EIRRLRGEYPQTKVYAVISDLGASGAYYIASAADEIYADKASLVGSIGVTAASFGFVET- 187 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLGV + S KA PF + + + V+D+++ F+ V + R + D Sbjct: 188 MEKLGVERRVYTSGEHKAFLDPFQPQKEEETRFWKTVLDTTHRQFIDSVKKGRGDRLKAD 247 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 + L G +W+G +A ++GL+D +G Sbjct: 248 EHPELFSGLVWSGEQALQLGLVDALG 273 >gi|298676111|ref|YP_003727861.1| signal peptide peptidase SppA [Methanohalobium evestigatum Z-7303] gi|298289099|gb|ADI75065.1| signal peptide peptidase SppA, 36K type [Methanohalobium evestigatum Z-7303] Length = 366 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 109/199 (54%), Gaps = 7/199 (3%) Query: 37 HVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 HV I G I S+++ I + S A+++ ++SPGGS A E I R I Sbjct: 103 HVQGTMITGSIPGGIGYSTSEDVASSIRKASDRSDVKAIVMRVNSPGGSPSAAEEISREI 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ K++ PV+ + ++AASA Y +S +++I+A +++ GSIGV++ + F D+ G Sbjct: 163 ERAKDKGIPVVVSMGDVAASAAYYVSAPADVIMANPSTMTGSIGVIWTFQNRSEFYDEEG 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + +KS +K +P+ + + +V Y FV V+E+R++ +SD Sbjct: 223 IEHEVIKSGELKDMGAPWRGLTEEERNYANKIVQEIYKNFVDHVAENRDLNRSFVNEISD 282 Query: 210 GRIWTGAEAKKVGLIDVVG 228 GRI+TG AK++GL+D G Sbjct: 283 GRIYTGMRAKELGLVDKFG 301 >gi|119720728|ref|YP_921223.1| signal peptide peptidase SppA, 36K type [Thermofilum pendens Hrk 5] gi|119525848|gb|ABL79220.1| signal peptide peptidase SppA, 36K type [Thermofilum pendens Hrk 5] Length = 307 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 116/217 (53%), Gaps = 14/217 (6%) Query: 35 SPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +P++A+I I+G I+ + +E I+ +++ D A A+++ SPGG+ A Sbjct: 40 TPYIAQITIKGTIDYASSSIFGATPGVEEYIKLVKQAEEDPMAKAVLLVFDSPGGTVTAS 99 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++A++++ +K V++ + AS Y+ + S I+A+ TS VGS+GV+ V Sbjct: 100 DELYQAVKELSQKKVVVSYAKGLLASGAYMAALPSRAILASPTSEVGSVGVIVTVLNVGN 159 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K+GV++ + KS +K SP+ + + ++++++V+ + F V E R + Sbjct: 160 LLGKIGVTVYTFKSGELKDVGSPYRPMTEEDAKVLEEMVNYYFGLFKGRVLEHRG---NV 216 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + GR +T +A + GLID V +E AL Sbjct: 217 SSEVFSGRPFTPDKALQAGLIDKVCTYQEAVNYTRAL 253 >gi|77166296|ref|YP_344821.1| peptidase S49, SppA [Nitrosococcus oceani ATCC 19707] gi|254435484|ref|ZP_05048991.1| peptidase, S49 (protease IV) family [Nitrosococcus oceani AFC27] gi|76884610|gb|ABA59291.1| Peptidase S49, SppA [Nitrosococcus oceani ATCC 19707] gi|207088595|gb|EDZ65867.1| peptidase, S49 (protease IV) family [Nitrosococcus oceani AFC27] Length = 325 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 17/232 (7%) Query: 35 SPHVARIAIRGQI-EDSQELIERIER----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +PH A + I G I DS E I++ ++ LI+ ++SPGGS I Sbjct: 74 TPHTALVKIEGIIGSDSFANAENIKKGLKAAFENEHIAGLILHINSPGGSPVQANQINDQ 133 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFL 145 I +++ P I + ++ AS GY I+ A++ I A + S+VGSIG L + +V+ + Sbjct: 134 IHQLRKEHPNIPIHAVITDICASGGYYIAVAADQIYADKASIVGSIGALINSFGFVEA-M 192 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLG+ + + K PFS + Q +Q ++D+ + F+++V ++R Sbjct: 193 EKLGIERRLFTAGDYKGFLDPFSPMKEFESQHIQKMLDNIHKQFIQVVKDNRGERLKNDS 252 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP-PK 256 L G +WTG +A +GLID +G V + + +G + KI D+ P PK Sbjct: 253 SLFSGLVWTGEQAIDLGLIDGLGNSNYVAREI--IGAE----KIVDYTPQPK 298 >gi|78485488|ref|YP_391413.1| peptidase S49 [Thiomicrospira crunogena XCL-2] gi|78363774|gb|ABB41739.1| S49 peptidase family protein [Thiomicrospira crunogena XCL-2] Length = 312 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 9/225 (4%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSA 66 Y++++LV L F+ V S HVA + + G I ++ L + ++ ++ Sbjct: 41 YIIVTLVML-ASQFTSEEDVLSGSKHVAVVKLEGAIMPGSRTSAETLNPLLNSAFKNPNS 99 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS I I ++K KPV V ++ AS Y I+ A++ I A Sbjct: 100 QAVIIKANSPGGSPVQSALINDEITRLKTLYNKPVYVVVEDLCASGCYYIAVAADKIYAN 159 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD-VVD 183 + S++GSIGV V ++K+G+ +S+ + KA PFS + Q Q+ +++ Sbjct: 160 KGSIIGSIGVRMDTFGVTGLMEKMGIENRSMHAGEHKAFIDPFSPKDESGRQFFQERILE 219 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ V + R + G +W G EA K G+ID +G Sbjct: 220 RTHQQFIEAVRKGRGDRIKENENTYTGLVWLGDEAVKNGMIDGLG 264 >gi|87118926|ref|ZP_01074824.1| Peptidase S49, SppA [Marinomonas sp. MED121] gi|86165317|gb|EAQ66584.1| Peptidase S49, SppA [Marinomonas sp. MED121] Length = 359 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 10/206 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT-----ALIVSLSSPGGSAYAG 83 + ++ +S +VA I + GQI Q + + DD+ AL++ ++SPGGS Sbjct: 105 AEMDTSSNYVAVIPMEGQIGAGQPIDANVVLPLIDDAYAKPGIQALVLKMNSPGGSPVHS 164 Query: 84 EAIFRAIQKVKNRK----PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I+ AI K+K ++ P V ++AAS GY I+ A++ I+ + SLVGSIGV+ Sbjct: 165 GIIYDAI-KLKRQQYPDVPTYVVVEDLAASGGYYIASAADTILVDKASLVGSIGVISAGF 223 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L K+GV + + KA PF + P +V+ Q V+D ++ F+ V E R Sbjct: 224 EATELLKKIGVERRVFTAGENKAFLDPFMPMAPASVKKWQAVLDETHKQFISAVKEGRGE 283 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLID 225 + L G +++G++A ++GL+D Sbjct: 284 RLTDSPDLFSGAVFSGSQAVELGLVD 309 >gi|294782115|ref|ZP_06747441.1| protease IV [Fusobacterium sp. 1_1_41FAA] gi|294480756|gb|EFG28531.1| protease IV [Fusobacterium sp. 1_1_41FAA] Length = 551 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E++E + + L++ ++SPGGSA E I++ Sbjct: 285 IAVINLEGEIDIRESRESVINYDNVVEKLEVLEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLE--IPIYISMGDLCASGGYYIATVGKKLFATSVTLTGSIGVVILYPEFTEIINKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVMQARNISEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 463 GGRVWLGSQAKENGLVDELGTLNDCIDSL 491 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 11/236 (4%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIER-IERIS 61 V +K K + + +SL + V F+ VED V+ ++I + S +++ + +E + Sbjct: 27 LVKRKFKNKDI-ISLKGVKTVVFNIGDLVED--YMVSAVSINKAL--SHDIVLKALENLV 81 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D +I+ + S E I +K+ K +I + Y I+ +N I Sbjct: 82 DDKKIEKIIIDVDEIDLSRVHIEEIKEIFKKLSADKEIIA-IGTTFDEYSYQIALLANKI 140 Query: 122 VAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQM 177 T S + G ++ PY K L LGV++ ++ K FS ++ + + Sbjct: 141 YMLNTKQSCLYFRGYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFSHDKMTEEKKES 200 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + ++ ++ + F+ LV E R + ++ D +AK++GLID + EE+ Sbjct: 201 LVNIKETLFQNFINLVKEKRKVDITNEILSGDLIFANSEKAKELGLIDGLSTYEEI 256 >gi|188587314|ref|YP_001918859.1| signal peptide peptidase SppA, 36K type [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352001|gb|ACB86271.1| signal peptide peptidase SppA, 36K type [Natranaerobius thermophilus JW/NM-WN-LF] Length = 325 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 4/169 (2%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 ++ D+A A+++ ++SPGG+ A + I I + P + + + A S GY IS A++ Sbjct: 90 AKADNAEAVVLRVNSPGGTVAASQEIASIIDDFE--LPTVVSMADSATSGGYYISAAADR 147 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +TS GSIGV+ + D LG+ ++ +K+ K F + + Q++QD Sbjct: 148 IKAQDTSTTGSIGVISVMYNFQELYDNLGIEVEVIKTGEYK--DMGFETMTEEERQIIQD 205 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D Y FV VS+ R++ + ++ G I TG A + GL+D +GG Sbjct: 206 LSDEMYEHFVAEVSDYRDMDKEDVYEVATGEIMTGTAAYEQGLVDGLGG 254 >gi|262368622|ref|ZP_06061951.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262316300|gb|EEY97338.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 343 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 11/234 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE------DSQELIERIE 58 K + Y++ L +T S SS S H+A + I G I +S + I+ ++ Sbjct: 55 FKCLTFAYLLFILFAMTK-SCSTSSTDATASKHIAVVDIVGTIAADEQSVNSDDTIKSLK 113 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ---KVKNRKPVITEVHEMAASAGYLIS 115 + + + A++++++SPGGS + I++ IQ K + K + + + AS Y I+ Sbjct: 114 KAFENKQSQAVVLNINSPGGSPVQSDEIWQEIQYLKKTHSDKKLYAVIGDTGASGAYYIA 173 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I+ +SLVGSIGV+ V + KLGV +++ S KA S VNP Sbjct: 174 SAADEILVNPSSLVGSIGVIMPNYGVNGLMQKLGVEDRTMTSGQNKALLSMTQPVNPAQR 233 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVG 228 +Q V+D+ + F+ V + R L G WTG +A K+G+ D +G Sbjct: 234 AHVQGVLDNVHEHFINAVKQGRGKKLKSNDPALFSGLFWTGDQAVKLGIADRIG 287 >gi|149926443|ref|ZP_01914704.1| Peptidase family U7 [Limnobacter sp. MED105] gi|149824806|gb|EDM84020.1| Peptidase family U7 [Limnobacter sp. MED105] Length = 318 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 35 SPHVARIAIRGQI-EDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 S H A + + G I DS +RI R + + +I+ ++SPGGS I Sbjct: 61 SRHTALVDLDGVIASDSLASADRINSSLRTAFESEGSVGVILRINSPGGSPVQAGLINDE 120 Query: 90 IQKVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I++++ + KP V E+ AS GY ++ A++ I + SLVGSIGV+ ++ Sbjct: 121 IKRLRAKYPEKPFYAVVEEVCASGGYYVAAAADKIYVDKASLVGSIGVVMNGFGFTGTME 180 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFSE +P + + + + + F+++V E R + Sbjct: 181 KLGVERRLITAGENKGFLDPFSEADPYQTEFAKQMAEEIHQQFIQVVKEGRGEKLAQNPE 240 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 L G +WTGA++ ++GL D +G Sbjct: 241 LFSGLVWTGAKSVELGLADELG 262 >gi|119944686|ref|YP_942366.1| peptidase S49 [Psychromonas ingrahamii 37] gi|119863290|gb|ABM02767.1| peptidase S49 [Psychromonas ingrahamii 37] Length = 321 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 16/228 (7%) Query: 17 LVTLTVVYFSWSSHV-----EDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSA 66 L ++F +++ + PH A + I+G I +E ++ + +++ + Sbjct: 39 LYLFGAIFFFFNTQTNLLSDQQKEPHTAMVQIKGVIAADKEANANTIVTGLRAAFKNEFS 98 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ ++SPGGS +F IQ+++ P + + E+ AS GY I+ A++ I A Sbjct: 99 QAVMLVINSPGGSPVQAGYVFDEIQRLRLLYPDKKLYAVIAELGASGGYYIAAAADQIYA 158 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + SLVGSIGV ++K+GV + S K PFS Q+V+D Sbjct: 159 DKASLVGSIGVTASSFGFVDLMNKVGVERRHYTSGKHKTFLDPFSPSKEAERDFWQEVLD 218 Query: 184 SSYHWFVRLVSESRN--IPYDKTLV-LSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ +V R I DK L G IW G +A +GLID +G Sbjct: 219 VTHRQFINVVKTGRGDRINSDKNSTDLFSGLIWNGEQALALGLIDGLG 266 >gi|188582538|ref|YP_001925983.1| peptidase S49 [Methylobacterium populi BJ001] gi|179346036|gb|ACB81448.1| peptidase S49 [Methylobacterium populi BJ001] Length = 286 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 5/181 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIV 122 SA AL+V +SPGGS I+R I+ + K V V + AAS GY+I+CA++ IV Sbjct: 62 SAVALVV--NSPGGSPVQSHLIYRRIRALAAEKEVRVFAFVEDAAASGGYMIACAADEIV 119 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A SLVGSIGV+ ++++G+ + KA PF NP+ + ++++ Sbjct: 120 ADPASLVGSIGVVSAGFGFDRLIERIGIERRVHTQGEAKAMLDPFRPENPEDIVRLKEIQ 179 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 F LV E R D + L G +WTG +A ++GL+D +G ++ Y V Sbjct: 180 ADVQALFTGLVRERRP-GLDASRDLFTGAVWTGRQALELGLVDALGDLRTTLRARYGEKV 238 Query: 243 D 243 D Sbjct: 239 D 239 >gi|261879358|ref|ZP_06005785.1| signal peptide peptidase SppA [Prevotella bergensis DSM 17361] gi|270333923|gb|EFA44709.1| signal peptide peptidase SppA [Prevotella bergensis DSM 17361] Length = 589 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 108/202 (53%), Gaps = 9/202 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VY+++ + V ++ P + + + ++++ + + ++ +D A+++ ++S GGSAYA Sbjct: 302 VYYAYGNIVNEDVPQNSFLTPNLIV--AKDVCKDLAELADNDDVKAVVLRVNSGGGSAYA 359 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+R ++ +K +KPV+ + AAS GY IS +N I A T++ GSIG+ Sbjct: 360 SEQIWRQVELLKAKKPVVVSMGGAAASGGYYISAGANYIYAEPTTITGSIGIFGIARDRS 419 Query: 143 PFLDK-LGV---SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + LGV +K+ ++S M +E P + + +Q +D Y F V++ R Sbjct: 420 DLMTRMLGVKYDEVKTNRNSTMGSEVKPMT---AEQFGYIQSSIDRGYMLFKNRVAKGRR 476 Query: 199 IPYDKTLVLSDGRIWTGAEAKK 220 + DK + G ++ G++A K Sbjct: 477 MSMDKVEAYAQGHVYLGSDALK 498 >gi|56708744|ref|YP_170640.1| peptidase [Francisella tularensis subsp. tularensis SCHU S4] gi|110671216|ref|YP_667773.1| peptidase [Francisella tularensis subsp. tularensis FSC198] gi|134302771|ref|YP_001122739.1| signal peptidase [Francisella tularensis subsp. tularensis WY96-3418] gi|187932300|ref|YP_001892285.1| serine peptidase, S49 family [Francisella tularensis subsp. mediasiatica FSC147] gi|224457951|ref|ZP_03666424.1| serine peptidase, S49 family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371355|ref|ZP_04987356.1| S49 family protease [Francisella tularensis subsp. tularensis FSC033] gi|254875608|ref|ZP_05248318.1| signal peptidase [Francisella tularensis subsp. tularensis MA00-2987] gi|54112669|gb|AAV28968.1| NT02FT0343 [synthetic construct] gi|56605236|emb|CAG46379.1| Peptidase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321549|emb|CAL09762.1| Peptidase [Francisella tularensis subsp. tularensis FSC198] gi|134050548|gb|ABO47619.1| Signal peptidase, S49 family [Francisella tularensis subsp. tularensis WY96-3418] gi|151569594|gb|EDN35248.1| S49 family protease [Francisella tularensis subsp. tularensis FSC033] gi|187713209|gb|ACD31506.1| serine peptidase, S49 family [Francisella tularensis subsp. mediasiatica FSC147] gi|254841607|gb|EET20043.1| signal peptidase [Francisella tularensis subsp. tularensis MA00-2987] gi|282160065|gb|ADA79456.1| Signal peptidase, S49 family protein [Francisella tularensis subsp. tularensis NE061598] Length = 307 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 12/201 (5%) Query: 36 PHVARIAIRGQIEDSQEL-IERIERISRDD-----SATALIVSLSSPGGSAYAGEAIFRA 89 PH+A I + G I D E ERI + S DD S +IV ++SPGGS + I+ Sbjct: 56 PHIALIKVNGVIADDAEANAERINQ-SLDDAYANKSVKGVIVEINSPGGSPVQSDEIYSH 114 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q ++++ P I ++ AS GY I+ + I A + ++ GSIGV+ +D Sbjct: 115 MQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGSGFGFTGLMD 174 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 KLG+ ++ S K PFS P+ ++++D ++ F+ V +SR DK + Sbjct: 175 KLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKELLDQTHQVFIAAVEKSRGDRLKDKNI 234 Query: 206 VLS-DGRIWTGAEAKKVGLID 225 + G ++G +A+++GLID Sbjct: 235 DTTFSGEPFSGIQAQQMGLID 255 >gi|240013099|ref|ZP_04720012.1| putative protease [Neisseria gonorrhoeae DGI18] gi|240122291|ref|ZP_04735253.1| putative protease [Neisseria gonorrhoeae PID24-1] Length = 328 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E + A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGKIGNGVEDQVKKLKDGMEAAYKKPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ + Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +K+GV + + K PFS P+ ++ ++++ + F++ V R + + + Sbjct: 196 EKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQ 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVG 228 + GR++TGA+A KVGL+D +G Sbjct: 256 YPDVFSGRVYTGADALKVGLVDGLG 280 >gi|240139855|ref|YP_002964332.1| protease SohB, belong to MEROPS peptidase family S49 (protease IV family, clan S-) [Methylobacterium extorquens AM1] gi|240009829|gb|ACS41055.1| protease SohB, belong to MEROPS peptidase family S49 (protease IV family, clan S-) [Methylobacterium extorquens AM1] Length = 286 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 5/181 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIV 122 SA AL++ +SPGGS I+R I+ + K V V + AAS GY+I+CA++ IV Sbjct: 62 SAVALVI--NSPGGSPVQSHLIYRRIRALAAEKEIKVFAFVEDAAASGGYMIACAADEIV 119 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A SLVGSIGV+ ++++G+ + KA PF NP+ + ++++ Sbjct: 120 ADPASLVGSIGVVSAGFGFDRLIERIGIERRVHTQGEAKAMLDPFRPENPQDIARLKEIQ 179 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 F LV E R D + L G +WTG +A +GL+D +G ++ Y V Sbjct: 180 ADVQALFSGLVRERRPT-LDASRDLFTGAVWTGRQALDLGLVDALGDLRGTLRARYGEKV 238 Query: 243 D 243 D Sbjct: 239 D 239 >gi|110833924|ref|YP_692783.1| peptidase [Alcanivorax borkumensis SK2] gi|110647035|emb|CAL16511.1| peptidase [Alcanivorax borkumensis SK2] Length = 326 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 10/224 (4%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSA 66 +V L + + V+ S V HV + + G I QE ++ + R ++ Sbjct: 47 FVYLFTLLVIVIPGKTGSAVTMAEAHVGIVDVNGVIAPDQEASADLIVTGLTRAFEAENT 106 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 TA+++ ++SPGGS ++ AI++++ P + + ++ AS Y I+ A++ I A Sbjct: 107 TAVLLKINSPGGSPVQSNQVYNAIKRLRAEYPEKKLYAAITDVGASGAYFIASAADEIYA 166 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S+VGSIGV+ ++ DKLGV + + K PFS V P + +Q ++D Sbjct: 167 DPASIVGSIGVIMAGFGLEQAADKLGVERRVFTAGENKDLMDPFSPVKPAHRKHVQTMLD 226 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLID 225 + F+ V + R + D L G WTG A +GLID Sbjct: 227 DIHQQFIAAVKKGRGNRLKVDGHPELFSGLFWTGERAMDLGLID 270 >gi|307352941|ref|YP_003893992.1| signal peptide peptidase SppA, 36K type [Methanoplanus petrolearius DSM 11571] gi|307156174|gb|ADN35554.1| signal peptide peptidase SppA, 36K type [Methanoplanus petrolearius DSM 11571] Length = 290 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 13/204 (6%) Query: 35 SPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 S V+ I I G IE S+ + RI + + D A+++ + SPGGS + Sbjct: 47 SKGVSVIRIEGTIETGDFYSGGYVGSEYVGSRIRQAADDPLVEAIVLRVDSPGGSPAGAQ 106 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +Q K +KPV + +MA SA Y IS ++ I A+ +L GSIG ++ + Sbjct: 107 EIIEDVQYAKTKKPVFVSMGDMATSAAYYISAYADKIYASPDTLTGSIGTIWTFIDTSRS 166 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L GV++ VKS MK S + + + + +Q +VD S+ F+ V RNI + Sbjct: 167 LQIEGVNVSIVKSGDMKDLTSQYRGLTDEEQEYVQAMVDESFERFLDDVLSQRNISRED- 225 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 + + +++ G +A +GLID G Sbjct: 226 --VEEAQLYRGEDAYDLGLIDEFG 247 >gi|157825673|ref|YP_001493393.1| Signal peptide peptidase SppA [Rickettsia akari str. Hartford] gi|157799631|gb|ABV74885.1| Signal peptide peptidase SppA [Rickettsia akari str. Hartford] Length = 304 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 6/185 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GYL++C+ + I A+ +S++GSIGV+ ++KLG+ + KA Sbjct: 119 DMAASGGYLLACSGDWIYASYSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKAIL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGL 223 PF +N + +++++D+ Y FV V R + +L +G W G A GL Sbjct: 179 DPFKPINKEDLKIIKDLQKHVYEHFVEYVKTRRVGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVG 228 ID +G Sbjct: 239 IDGIG 243 >gi|218531356|ref|YP_002422172.1| peptidase S49 [Methylobacterium chloromethanicum CM4] gi|218523659|gb|ACK84244.1| peptidase S49 [Methylobacterium chloromethanicum CM4] Length = 286 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 5/181 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIV 122 SA AL++ +SPGGS I+R I+ + K V V + AAS GY+I+CA++ IV Sbjct: 62 SAVALVI--NSPGGSPVQSHLIYRRIRALAAEKEIRVFAFVEDAAASGGYMIACAADEIV 119 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A SLVGSIGV+ ++++G+ + KA PF NP+ + ++++ Sbjct: 120 ADPASLVGSIGVVSAGFGFDRLIERIGIERRVHTQGEAKAMLDPFRPENPQDIARLKEIQ 179 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 F LV E R D + L G +WTG +A +GL+D +G ++ Y V Sbjct: 180 ADVQALFSGLVRERRPT-LDASRDLFTGAVWTGRQALDLGLVDALGDLRGTLRARYGEKV 238 Query: 243 D 243 D Sbjct: 239 D 239 >gi|329118386|ref|ZP_08247092.1| signal peptide peptidase SppA [Neisseria bacilliformis ATCC BAA-1200] gi|327465432|gb|EGF11711.1| signal peptide peptidase SppA [Neisseria bacilliformis ATCC BAA-1200] Length = 352 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 18/221 (8%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N H A I + G I + L + +E D + +I+ +SPGGS F Sbjct: 96 NKEHTAVIKLNGVIGGGYQDQVALLRDGLEAAYADKNVKGIIIRANSPGGSPVVSNTAFN 155 Query: 89 AIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K + P+ +M AS Y I+ A++ I A +SLVGSIGV+ + Sbjct: 156 EIRRLKEQHKDIPLYLVAEDMCASGCYYIAAAADKIYADPSSLVGSIGVIGGSFDFTGIM 215 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 DKLG+ + + K PFS P+ + Q ++D + F+ V R + + Sbjct: 216 DKLGIKRRLRTAGSNKGMGDPFSPETPEQTAIWQQMLDDIHGEFINAVKTGRGSRLKTND 275 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + S GRI+TG EA+K GLID G ++Y++ DQ Sbjct: 276 PQIFS-GRIYTGLEAQKNGLIDGFG-------NIYSVARDQ 308 >gi|254562274|ref|YP_003069369.1| protease SohB, belong to MEROPS peptidase family S49 [Methylobacterium extorquens DM4] gi|254269552|emb|CAX25518.1| protease SohB, belong to MEROPS peptidase family S49 (protease IV family, clan S-) [Methylobacterium extorquens DM4] Length = 286 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 5/181 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIV 122 SA AL++ +SPGGS I+R I+ + K V V + AAS GY+I+CA++ IV Sbjct: 62 SAVALVI--NSPGGSPVQSHLIYRRIRALAAEKEIKVFAFVEDAAASGGYMIACAADEIV 119 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A SLVGSIGV+ ++++G+ + KA PF NP+ + ++++ Sbjct: 120 ADPASLVGSIGVVSAGFGFDRLIERIGIDRRVHTQGEAKAMLDPFRPENPQDIARLKEIQ 179 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 F LV E R D + L G +WTG +A +GL+D +G ++ Y V Sbjct: 180 ADVQALFSGLVRERRPT-LDASRDLFTGAVWTGRQALDLGLVDALGDLRGTLRARYGEKV 238 Query: 243 D 243 D Sbjct: 239 D 239 >gi|237800341|ref|ZP_04588802.1| peptidase S49, SppA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023198|gb|EGI03255.1| peptidase S49, SppA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 332 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 10/214 (4%) Query: 34 NSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 S H A I ++G I D ++ ++ +++ D+ +I+ ++SPGGS ++ Sbjct: 76 RSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVILRINSPGGSPVQSGYVYD 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I++++ KP V + ++ AS Y I+ A++ I A + SLVGSIGV + Sbjct: 136 EIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASLVGSIGVTAAGFGFVGTM 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 +KLGV ++ S KA PF Q Q V+D+++ F+ V + R + Sbjct: 196 EKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQFIASVKQGRGDRLKDKD 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L G +WTG +A +GL+D +G V + L Sbjct: 256 HPELFSGLVWTGEQAVGLGLVDGLGNASYVAREL 289 >gi|167570707|ref|ZP_02363581.1| peptidase, U7 family protein [Burkholderia oklahomensis C6786] Length = 332 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 8/209 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A + I G+I +++++ ++ D +++ ++SPGGS ++ I+ Sbjct: 80 HTAVVTIDGEIAASTNANAEDINSALDSAFEDSGTAGVVLRINSPGGSPVQAGIVYDEIR 139 Query: 92 KVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + KP+ V +M AS GY I+ A++ I + S+VGSIGVL + KL Sbjct: 140 RLRKKYPAKPLYVVVTDMCASGGYYIASAADKIYVDKASVVGSIGVLMDGFGFTGLMGKL 199 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + S K PFS PK Q+++D + F++ V + R + + Sbjct: 200 GVERRLHTSGENKGFFDPFSPETPKMDAHAQEMLDEIHEQFIKAVKDGRGARLHDSPDIF 259 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G WTGA++ ++GL D G + V + + Sbjct: 260 SGLFWTGAKSIELGLADDFGTTDTVARDV 288 >gi|167563547|ref|ZP_02356463.1| peptidase, U7 family protein [Burkholderia oklahomensis EO147] Length = 332 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 8/209 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A + I G+I +++++ ++ D +++ ++SPGGS ++ I+ Sbjct: 80 HTAVVTIDGEIAASTNANAEDINSALDSAFEDSGTAGVVLRINSPGGSPVQAGIVYDEIR 139 Query: 92 KVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + KP+ V +M AS GY I+ A++ I + S+VGSIGVL + KL Sbjct: 140 RLRKKYPAKPLYVVVTDMCASGGYYIASAADKIYVDKASVVGSIGVLMDGFGFTGLMGKL 199 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + S K PFS PK Q+++D + F++ V + R + + Sbjct: 200 GVERRLHTSGENKGFFDPFSPETPKMDAHAQEMLDEIHEQFIKAVKDGRGARLHDSPDIF 259 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G WTGA++ ++GL D G + V + + Sbjct: 260 SGLFWTGAKSIELGLADDFGTTDTVARDV 288 >gi|237740732|ref|ZP_04571213.1| protease IV [Fusobacterium sp. 2_1_31] gi|229422749|gb|EEO37796.1| protease IV [Fusobacterium sp. 2_1_31] Length = 294 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E++E + + L++ ++SPGGSA E I++ Sbjct: 28 IAVINLEGEIDTRESREAVINYDNVVEKLETLEDIKNLKGLVLRINSPGGSALESEKIYQ 87 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + + AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 88 KLKKLE--IPIYISMGDFCASGGYYIATVGKKLFATPVTLTGSIGVVILYPEFSETINKL 145 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V E+RNI + ++ Sbjct: 146 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIVYSMNEVYSEFKAHVMEARNISEEDLEKIA 205 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 206 GGRVWLGSQAKENGLVDELGTLNDCIDSL 234 >gi|89094371|ref|ZP_01167312.1| peptidase, putative [Oceanospirillum sp. MED92] gi|89081430|gb|EAR60661.1| peptidase, putative [Oceanospirillum sp. MED92] Length = 349 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 14/241 (5%) Query: 37 HVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I ++G I E +I + +++ A A+I+ ++SPGGS I+ I+ Sbjct: 97 HTAIIEVKGPISADDEANADSIIWSLREAFKEEQAKAIILRINSPGGSPVQSGYIYDEIK 156 Query: 92 KVKN---RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ KPV + ++ AS Y I+ A++ I A + SLVGSIGV+ ++K+ Sbjct: 157 RLRQIYTDKPVYAVITDIGASGAYYIAAAADSIYADKASLVGSIGVVAGGFGFVDLMNKV 216 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + KA PFS + Q V+++++ F+ V R + L Sbjct: 217 GVERRLYTAGEHKAFLDPFSPSKEGEKEFWQGVLNTTHQQFIDQVKLGRGERLKDSPELF 276 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G +WTG +A +GL+D +G V + + + K+ D++P + W + L + Sbjct: 277 SGLVWTGEQAVDLGLVDGLGSSSYVAREIV------KVEKLVDYSPQQAPWKQLVDELGV 330 Query: 269 S 269 S Sbjct: 331 S 331 >gi|88608447|ref|YP_506296.1| signal peptide peptidase SppA, 36K type [Neorickettsia sennetsu str. Miyayama] gi|88600616|gb|ABD46084.1| signal peptide peptidase SppA, 36K type [Neorickettsia sennetsu str. Miyayama] Length = 308 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 1/217 (0%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 ++P++ R+ G I+ + + + A+I+ + S GG A A EA++ ++ V Sbjct: 49 STPYIGRVVFSGVIDQDLARNSQFASFADNPKIKAIILHVDSGGGGAAASEALYNVVRSV 108 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPV+ + + AS Y+++ A+ IVA TS+VGSIG++ Q P K+GV + Sbjct: 109 SQVKPVVIVANGIMASGAYMVAMAAEHIVAYNTSIVGSIGMILQAPNFYEIGKKVGVKMD 168 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRI 212 V+S +KA PS E +A M+ + + F+ +V E R I + + ++ G+I Sbjct: 169 VVRSGRLKAFPSILEEFTKEARLAMEHSISVANEHFLSMVQERRKITDARVMSEIATGKI 228 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 +TG EA + L+D +G + + L G+ IR + Sbjct: 229 FTGREALEFSLVDEIGDEGNAVRWLKERGITGKIRDL 265 >gi|51246051|ref|YP_065935.1| proteinase IV [Desulfotalea psychrophila LSv54] gi|50877088|emb|CAG36928.1| related to proteinase IV [Desulfotalea psychrophila LSv54] Length = 606 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 99/183 (54%), Gaps = 7/183 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S+ LI I+ D++ AL++ ++S GGSA+A E I + + K + K +I + +AA Sbjct: 342 SESLIRIIKEARDDENIKALVLRINSGGGSAFASELIRQELLAFKAKGKTLIVSMGRLAA 401 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS--- 165 S GY IS ++ I A+ ++ GSIG+ P + L LG+ V +SP+ + Sbjct: 402 SGGYWISADADQIWASPATITGSIGIFAAIPTFEKSLAHLGIYCDGVGTSPLAGATNISK 461 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P +E A+Q+ + Y F+ +VS R I +K ++ G +++G +A ++GL+D Sbjct: 462 PLTEPIKAALQIS---IKHGYRQFINIVSIGRGIEPEKVEAMAQGHVYSGKKALQLGLVD 518 Query: 226 VVG 228 +G Sbjct: 519 KLG 521 >gi|329900911|ref|ZP_08272643.1| Peptidase S49 [Oxalobacteraceae bacterium IMCC9480] gi|327549323|gb|EGF33895.1| Peptidase S49 [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 16/232 (6%) Query: 13 VMLSLVTLTVVYFS-WS------SHVEDNSPHVARIAIRGQIEDSQE------LIERIER 59 + L TL V F W+ + E + H A I I G IE +I + + Sbjct: 29 IFFRLATLAAVVFGIWAFVSFGKTDTEVLTTHTALIDIDGTIESGGGSGSAESVIPALNK 88 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAI---QKVKNRKPVITEVHEMAASAGYLISC 116 D +A +I+ ++SPGGS I I K+ +KP+ V EM AS GY I+ Sbjct: 89 AYADTAAVGIILRINSPGGSPVQAGMINDEIGRLHKLYPKKPLYVVVDEMCASGGYYIAV 148 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DK+GV + + K PFS + K Sbjct: 149 AADKIFVNKASIVGSIGVLMDGFGFTGLMDKVGVERRLQTAGVNKGFMDPFSPQSEKQKA 208 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q+++D + F+ +V + R +T G WTG +A ++GL D G Sbjct: 209 YAQEMLDEIHQQFIDVVRKGRGKRLKETPETFSGLFWTGTKAVEMGLADGFG 260 >gi|89255457|ref|YP_512818.1| peptidase [Francisella tularensis subsp. holarctica LVS] gi|115313986|ref|YP_762709.1| protease [Francisella tularensis subsp. holarctica OSU18] gi|167009293|ref|ZP_02274224.1| S49 family protease [Francisella tularensis subsp. holarctica FSC200] gi|169656469|ref|YP_001427444.2| S49 family peptidase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254366865|ref|ZP_04982903.1| peptidase, S49 family [Francisella tularensis subsp. holarctica 257] gi|254368438|ref|ZP_04984455.1| serine peptidase [Francisella tularensis subsp. holarctica FSC022] gi|290953102|ref|ZP_06557723.1| S49 family peptidase [Francisella tularensis subsp. holarctica URFT1] gi|295313688|ref|ZP_06804271.1| S49 family peptidase [Francisella tularensis subsp. holarctica URFT1] gi|89143288|emb|CAJ78449.1| Peptidase [Francisella tularensis subsp. holarctica LVS] gi|115128885|gb|ABI82072.1| S49 family protease [Francisella tularensis subsp. holarctica OSU18] gi|134252693|gb|EBA51787.1| peptidase, S49 family [Francisella tularensis subsp. holarctica 257] gi|157121332|gb|EDO65533.1| serine peptidase [Francisella tularensis subsp. holarctica FSC022] gi|164551537|gb|ABU60488.2| peptidase, S49 family [Francisella tularensis subsp. holarctica FTNF002-00] Length = 307 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 36 PHVARIAIRGQIEDSQEL-IERIERISRDD-----SATALIVSLSSPGGSAYAGEAIFRA 89 PH+A I + G I D E ERI + S DD S +IV ++SPGGS + I+ Sbjct: 56 PHIALIKVNGVIADDAEANAERINQ-SLDDAYANKSVKGVIVEINSPGGSPVQSDEIYSH 114 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q ++++ P I + AS GY I+ + I A + ++ GSIGV+ +D Sbjct: 115 MQYLQHKYPTIPMYAVCTNVCASGGYYIAAGAKDIYANKMTITGSIGVIGSGFGFTGLMD 174 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 KLG+ ++ S K PFS P+ ++++D ++ F+ V +SR DK + Sbjct: 175 KLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKELLDQTHQVFIAAVEKSRGDRLKDKNI 234 Query: 206 VLS-DGRIWTGAEAKKVGLID 225 + G ++G +A+++GLID Sbjct: 235 DTTFSGEPFSGIQAQQMGLID 255 >gi|319406065|emb|CBI79695.1| protease [Bartonella sp. AR 15-3] Length = 275 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 23/245 (9%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS----------ATALIVSLSSPG 77 S N+ + + ++G I S L+ R ++R S A A+ + ++SPG Sbjct: 2 SCCFRSNTVQIPVVRLQGAIISSNSLMSRTLSLARSASLLDKAFSYKKAPAVALIINSPG 61 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS IF+ I+ + N K V T V ++AAS GY+I+CA + I A +S+VGSIGV+ Sbjct: 62 GSPVQSRLIFQRIRDLANEKNKQVFTFVEDVAASGGYMIACAGDEIFADPSSIVGSIGVV 121 Query: 136 ---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 F +P L K+GV + + K PF V ++ + + F+ L Sbjct: 122 SASFGFP---ELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKSLQLEVHQTFIDL 178 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V E R + G W+G + ++GLID +G V + + G + +R I Sbjct: 179 VKERRMSKLSDDPNIFTGMFWSGKKGVELGLIDELGDVRSVIKKRF--GNNAKLRLI--- 233 Query: 253 NPPKN 257 +PPK+ Sbjct: 234 SPPKS 238 >gi|32267191|ref|NP_861223.1| hypothetical protein HH1692 [Helicobacter hepaticus ATCC 51449] gi|32263244|gb|AAP78289.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 294 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 114/218 (52%), Gaps = 9/218 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 SP++A++ + I +S+ +IE+I+++ + +++ + SPGG+ A I I+ + Sbjct: 46 SPNLAKLYLTTPIYESESFAAQIEKITKNKNIKGVLLIIDSPGGTVGASIEIADMIKSLA 105 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + PVI AS Y +N I A +L+GSIGV+F +K LDK+G+ + Sbjct: 106 QKMPVIAYTQGSMASGSYYAGMYANEIYANRGALIGSIGVIFNGLNIKEMLDKIGIKEQG 165 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-----IPYDKTLVLSD 209 +K+ K + + + + +++++ Y F + V ++R + Y + ++ Sbjct: 166 IKAGSYKEVGTSMRQWSEEEKLFLENLLQEQYELFRKDVIKARGSRLKVVDYRE---FAE 222 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSI 246 G++++ +A ++GLID VG +E +L GV ++I Sbjct: 223 GKVFSAHKALQLGLIDKVGSMQEAVATLQQHTGVKEAI 260 >gi|14520806|ref|NP_126281.1| putative protease [Pyrococcus abyssi GE5] gi|5458022|emb|CAB49512.1| Putative protease [Pyrococcus abyssi GE5] Length = 335 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 7/206 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEA 85 S +V + +A + I G I+ S L I+ I I +D+ +++ + SPGG Sbjct: 81 SENVTTANATIAVLPIIGPIDSSSALGIIKAIREIRGNDTIKGVLLWIESPGGYVGPVRE 140 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++K+ KP++ V A S Y I+CA+ I+A S VGSIGV++ + + + Sbjct: 141 IYNELKKLGYLKPIVAYVSGYAYSGAYYIACAAREIIAEPLSEVGSIGVIYVHFNAEEYY 200 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G+ ++ K+ P K + + + P+ ++++ + + ++ F+ +VSE RN+ ++T Sbjct: 201 KMNGIEVEVFKTGPYKDMGADWRGLTPEERDIIKNEIQTYFNDFLEVVSEGRNMTINETK 260 Query: 206 VLSDGRIW-----TGAEAKKVGLIDV 226 + GR W G K+G DV Sbjct: 261 KFATGRAWFAKDVNGTLVDKLGDFDV 286 >gi|146306653|ref|YP_001187118.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina ymp] gi|145574854|gb|ABP84386.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina ymp] Length = 326 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 12/206 (5%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 H A I IRG I D ++ ++ + D + +I+ ++SPGGS I+ Sbjct: 70 TGAHTALIEIRGMIADQEQASADKVVGSLRAAFEDANTKGVILRINSPGGSPVQSGYIYD 129 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPF 144 I++++ P V + ++ AS Y I+ A++ I A + SLVGSIGV + +V+ Sbjct: 130 EIRRLRGEHPQIKVYAVITDLGASGAYYIASAADEIYADKASLVGSIGVTAASFGFVET- 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLGV + S KA PF + + + V+D+++ F+ V + R + D Sbjct: 189 MEKLGVERRVYTSGEHKAFLDPFQPQKEEETRFWKGVLDTTHRQFIESVKQGRGDRLKAD 248 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 L G +W+G +A ++GL+D +G Sbjct: 249 AHPELFSGLVWSGEQALQLGLVDALG 274 >gi|225025425|ref|ZP_03714617.1| hypothetical protein EIKCOROL_02323 [Eikenella corrodens ATCC 23834] gi|224941709|gb|EEG22918.1| hypothetical protein EIKCOROL_02323 [Eikenella corrodens ATCC 23834] Length = 321 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 9/203 (4%) Query: 35 SPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH A I + G I + +L + +E ++ +I+ +SPGGS +R I Sbjct: 70 GPHTAVIRLEGAITAGENQAGKLRQGLEAAYKNKQVRGIIIRANSPGGSPVVSGVAYREI 129 Query: 91 QKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++++ P V +M AS Y I+ A++ I A ++S+VGSIGV+ + + Sbjct: 130 RRLRAEHPGIPVYVVAEDMCASGCYYIAAAADKIYADQSSIVGSIGVVGSSFDLTGLMHN 189 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK--TL 205 +G+ + + K PFS P+ + Q ++D + F++ V + R ++ Sbjct: 190 MGIQRRQRTAGSNKGMGDPFSPETPEQTAIWQGMLDDIHQQFIKAVRDGRGKRLNEADNP 249 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 L GR++TG EA K GLID +G Sbjct: 250 DLFSGRVYTGNEALKTGLIDGLG 272 >gi|262039550|ref|ZP_06012849.1| protease IV [Leptotrichia goodfellowii F0264] gi|261746428|gb|EEY33968.1| protease IV [Leptotrichia goodfellowii F0264] Length = 549 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 118/233 (50%), Gaps = 3/233 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + + E+++++ + L++ ++SPGGSA E I + ++K+ P+ + ++ AS Sbjct: 306 KNVCEKLDKLEDIKNLKGLVLRINSPGGSALESEKIHQKLKKLD--VPIYISMGDVCASG 363 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I+ A I A +L GSIGV+ YP + L+K+ V+I+ + + F + Sbjct: 364 GYYIASAGKKIFADSMTLTGSIGVVLMYPELSETLNKIDVNIEGFEKGKGFDIFNIFETL 423 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ + + ++ Y F V +R + ++ ++ GR+W G+EA + LID +G Sbjct: 424 SEESKEKIIHTMNEVYSEFKSHVIAAREMSEEELEKIAGGRVWLGSEAVNINLIDEIGSL 483 Query: 231 EEVWQSLYA-LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 E+ +++ L +++ +I + D+K IS LED I M+ Sbjct: 484 EKSVETMVKDLKLEKYKVEIIELKKSLKETLTDIKAPLISEELEDKIRFMQNN 536 >gi|163852521|ref|YP_001640564.1| peptidase S49 [Methylobacterium extorquens PA1] gi|163664126|gb|ABY31493.1| peptidase S49 [Methylobacterium extorquens PA1] Length = 286 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 5/181 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIV 122 SA AL++ +SPGGS I+R I+ + K V V + AAS GY+I+CA++ IV Sbjct: 62 SAVALVI--NSPGGSPVQSHLIYRRIRALAAEKEIKVFAFVEDAAASGGYMIACAADEIV 119 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A SLVGSIGV+ ++++G+ + KA PF NP + ++++ Sbjct: 120 ADPASLVGSIGVVSAGFGFDRLIERIGIERRVHTQGEAKAMLDPFRPENPLDIARLKEIQ 179 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 F LV E R D + L G +WTG +A ++GL+D +G ++ Y V Sbjct: 180 ADVQALFSGLVRERRPT-LDASRDLFTGAVWTGRQALELGLVDAIGDLRGTLRARYGEKV 238 Query: 243 D 243 D Sbjct: 239 D 239 >gi|94311372|ref|YP_584582.1| peptidase S49 [Cupriavidus metallidurans CH34] gi|93355224|gb|ABF09313.1| Peptidase S49, periplasmic serine protease (ClpP class) [Cupriavidus metallidurans CH34] Length = 387 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 11/243 (4%) Query: 7 KIKTRYVMLSLVTL---TVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R++ L++V L V+ F + H A + + G+I + + ++ Sbjct: 101 KIFFRFLTLAIVALILYAVIDFKGDVLSSTSGRHTAMVTLDGEIAAGTTASADSINAALQ 160 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 D SA +I+ ++SPGGS I I +++ KP V E+ AS GY ++ Sbjct: 161 AAFEDTSAAGVILKINSPGGSPVQAGIINDEIHRLRKLYPDKPFYVVVEEICASGGYYVA 220 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DK+GV + S K PFS P+ Sbjct: 221 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVQRRLYTSGANKGMLDPFSPEVPRQK 280 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ + F+ +V E R L G W+G A ++GL D +G + V + Sbjct: 281 GYAESMLKEIHQQFIDVVKEGRGDRLKNDPELFSGLFWSGERAVELGLADGLGSADYVAR 340 Query: 236 SLY 238 L+ Sbjct: 341 DLF 343 >gi|34762510|ref|ZP_00143508.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887843|gb|EAA24913.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 502 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 236 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 295 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 296 KLKKLE--IPIYISMGDLCASGGYYIATIGKKLFANPVTLTGSIGVVILYPEFTETINKL 353 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V E+RNI + ++ Sbjct: 354 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVMEARNISEEDLEKIA 413 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK GL+D +G + SL Sbjct: 414 GGRVWLGSQAKANGLVDELGSLNDCIDSL 442 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 38/187 (20%), Positives = 82/187 (43%), Gaps = 5/187 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L++ +E + D +I+ + S E I +K+ K +I + + Sbjct: 22 ETLLKALENLVNDKKIEKIIIDVDEVDLSRVHIEEIKEIFEKLSVNKEIIA-IGTIFDEY 80 Query: 111 GYLISCASNIIVAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y ++ +N I T S + G ++ PY K L LGV++ ++ K FS Sbjct: 81 SYQVALLANKIYMLNTKQSCLYFRGYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFS 140 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +++ + + + ++ ++ + F+ L+ E R + ++ D +A ++GLID Sbjct: 141 NDKMSEEKKESLINIKETLFQNFINLIKEKRKVDITNEILSGDLIFANSEKAIQLGLIDG 200 Query: 227 VGGQEEV 233 + EE+ Sbjct: 201 LSTYEEI 207 >gi|118496733|ref|YP_897783.1| S49 family serine peptidase [Francisella tularensis subsp. novicida U112] gi|208779996|ref|ZP_03247339.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] gi|254372099|ref|ZP_04987592.1| S49 family protease [Francisella tularensis subsp. novicida GA99-3549] gi|254375246|ref|ZP_04990726.1| peptidase [Francisella novicida GA99-3548] gi|118422639|gb|ABK89029.1| serine peptidase, S49 family [Francisella novicida U112] gi|151569830|gb|EDN35484.1| S49 family protease [Francisella novicida GA99-3549] gi|151572964|gb|EDN38618.1| peptidase [Francisella novicida GA99-3548] gi|208744000|gb|EDZ90301.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] Length = 307 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 36 PHVARIAIRGQIEDSQEL-IERIERISRDD-----SATALIVSLSSPGGSAYAGEAIFRA 89 PH+A I + G I D E ERI + S DD S +IV ++SPGGS + I+ Sbjct: 56 PHIALIKVNGVIADDAEANAERINQ-SLDDAYANKSVKGVIVEINSPGGSPVQSDEIYSH 114 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q ++++ P I ++ AS GY I+ + I A + ++ GSIGV+ +D Sbjct: 115 MQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGSGFGFTGLMD 174 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 KLG+ ++ S K PFS P+ + ++D ++ F+ V +SR DK + Sbjct: 175 KLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKKLLDQTHQVFIAAVEKSRGDRLKDKNI 234 Query: 206 VLS-DGRIWTGAEAKKVGLID 225 + G ++G +A+++GLID Sbjct: 235 DTTFSGEPFSGIQAQQMGLID 255 >gi|121998030|ref|YP_001002817.1| peptidase S49 [Halorhodospira halophila SL1] gi|121589435|gb|ABM62015.1| peptidase S49 [Halorhodospira halophila SL1] Length = 316 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 12/209 (5%) Query: 32 EDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E+ PH A + I G I ++++I +ER D A +++ ++SPGGSA I Sbjct: 56 EEIGPHTAEVRIDGPIMSDSAASAEQVIRGLERAFEADDAAGVVLRINSPGGSAVHARQI 115 Query: 87 FRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 ++ I++++ PV + ++ S Y ++ A++ I E+S+VGSIGV+ + Sbjct: 116 YQEIRRLREEYEDIPVHAVIEDIGTSGAYYVAAAADQIHVNESSIVGSIGVIMGSFGIGE 175 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+KLG+ + + KA PF+ + V+ ++ ++D + F+ V + R D Sbjct: 176 ALEKLGIERRVYTAGDDKAFLDPFAPEDEAHVEHVRTMLDDIHGQFIAAVRDGRGEQIDA 235 Query: 204 TLVLSD----GRIWTGAEAKKVGLIDVVG 228 D G IWTG ++ GL D +G Sbjct: 236 AGADEDRLFSGLIWTGQQSLDKGLADEIG 264 >gi|297538693|ref|YP_003674462.1| peptidase S49 [Methylotenera sp. 301] gi|297258040|gb|ADI29885.1| peptidase S49 [Methylotenera sp. 301] Length = 327 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 8/205 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I + G IE ++ + + D + +I+ ++SPGGS I I+ Sbjct: 76 HTALIEVAGVIEAGGAVNADSFMSSLHDAYDDKNTKGIILRINSPGGSPVQAGIINDEIK 135 Query: 92 KVKN---RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + K + PV V ++ AS GY I+ A++ I + S+VGSIGVL + K+ Sbjct: 136 RQKKLHPKIPVYAVVEDICASGGYYIAAAADKIYVDKASIVGSIGVLMDGYGFTEVMKKV 195 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + + KA PFS VNPK + Q +++ + F +V + R +T Sbjct: 196 GVERRLLTAGENKAMLDPFSPVNPKHQALAQAMLNEIHEQFKTVVRQGRGSRLKETPETF 255 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G W+G E+ K+GL D +G + V Sbjct: 256 SGLFWSGEESIKMGLADALGSADYV 280 >gi|194333353|ref|YP_002015213.1| signal peptide peptidase SppA, 36K type [Prosthecochloris aestuarii DSM 271] gi|194311171|gb|ACF45566.1| signal peptide peptidase SppA, 36K type [Prosthecochloris aestuarii DSM 271] Length = 596 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 1/199 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D Q L E ++ ++S A+++ + SPGG A A + + + +KP++ + +AA Sbjct: 326 DEQSLREALDAALDEESVKAIVLRIDSPGGDALASANMLQMLDSANVQKPIVASMSGVAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY+ + A++ I A ++ GSIGV P ++ +K+G+ + V + F Sbjct: 386 SGGYMAALAADSIFADPLTVTGSIGVYALKPNIQGLQEKIGLRREVVTRGKNADAYTLFK 445 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + Y F+ V+E R++ ++ ++ GRIW+G A GL+D G Sbjct: 446 PLDEDGFAKFMETTGWIYDDFINKVAEHRDMKPEEVDAVAGGRIWSGKAAVTAGLVDRTG 505 Query: 229 GQEEVWQSLYAL-GVDQSI 246 G E ++ + G+D S+ Sbjct: 506 GLREAVEAAQRMAGIDSSL 524 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 3/182 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 Q+LI +E +D+ T +++ + + ++ + AIQ+ +T A Sbjct: 73 QDLIFLLEDAGKDERVTQVVLDIDAIRFASAQIRQLQEAIQRTSASGTPVTGFLHAAGDQ 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 ++ A + ++A + G+ + + L+K+GVS ++ + K+ P++ Sbjct: 133 DLWLASACDTLIAERGNQFLLDGLRAEMLFYAGTLEKIGVSFQAAQWKAWKSGIEPYTRE 192 Query: 171 N--PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDVV 227 N P+ ++ + ++D Y + VS+ R I + + D + AE A+++ L+D V Sbjct: 193 NASPEYLEQIGTMLDGIYDDYTAYVSQQRGISQEAYKNIIDEKTVVSAEQARQLRLVDRV 252 Query: 228 GG 229 G Sbjct: 253 SG 254 >gi|2499884|sp|Q48513|PFAP_LEPBO RecName: Full=Putative peptidase pfaP; AltName: Full=PF-associated peptidase; AltName: Full=Periplasmic flagella-associated protein; Flags: Precursor gi|440320|gb|AAA79884.1| hypothetical peptidase [Leptospira borgpetersenii] Length = 204 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++ + ++ + +MAAS GY I+ +++ I A ++ GSIGVL Y + F LGV Sbjct: 2 RLRKTRKIVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVLQWLRYQRAF-GSLGVK 60 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 +++ K K S F + P+ +M+Q ++ +Y+ FV+ V++ RN L++GR Sbjct: 61 MRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGR 120 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 I++G +A + L+D +GG++E + L L Sbjct: 121 IYSGQDAFRNKLVDEIGGRKEALEELSRL 149 >gi|283778612|ref|YP_003369367.1| signal peptide peptidase SppA, 36K type [Pirellula staleyi DSM 6068] gi|283437065|gb|ADB15507.1| signal peptide peptidase SppA, 36K type [Pirellula staleyi DSM 6068] Length = 352 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 131/248 (52%), Gaps = 14/248 (5%) Query: 38 VARIAIRGQIEDSQELIER-IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +A I+I G I + ++R I+R+++D++ A++V + SPGG+ + I ++K++ Sbjct: 71 IAIISIEGVIAEGDGFVKRQIDRVAKDENVKAIVVRVDSPGGTVTGSDYILHHLKKLRKE 130 Query: 97 K---PVITEVHEMAASAGYLISCA----SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 K P++ + MAAS GY +S A N+I A T+ GSIGV+ + + + K Sbjct: 131 KSDIPLVVSMGSMAASGGYYVSMAVGDQENVIYAEPTTTTGSIGVIIPHYDISGLMAKFD 190 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLV-- 206 + S+ S K + + + +++Q V+ S+ F ++ E R D++ + Sbjct: 191 IKDDSIASHERKQMLTMTKPIPQEHREIIQGYVNESFGRFKSIIKEGRPGFKADESKLDQ 250 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEE-VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G I++ +A K GL+D +G E+ + ++L +D++ ++ ++ P + + D+ Sbjct: 251 LATGEIFSADQALKHGLVDKIGFIEDAIDRALELAKLDKAKTRVVEFEKPASLF--DVGA 308 Query: 266 LSISSLLE 273 +++S E Sbjct: 309 IAMSRAAE 316 >gi|52548335|gb|AAU82184.1| periplasmic serine protease [uncultured archaeon GZfos11A10] Length = 381 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 19/263 (7%) Query: 12 YVMLSLVTLTVVYFS-------------WSSHVEDNSPHVARIAIRGQIED------SQE 52 Y++L L+ +T++ S +S+ + +V + I G + D S+ Sbjct: 90 YIILVLLMITIIGVSLALILGGSDLPGLYSTGDQIAVVYVQGVMITGGLPDGFGFATSES 149 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + + I + D S A+++ ++SPGGS A + I I+K K+ KPV+ + ++AASA Y Sbjct: 150 ICKNIRLAADDTSVKAIVLRVNSPGGSPAAAQEIAHEIKKAKSEKPVVVSMGDVAASAAY 209 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS ++ I+A ++ GSIGV++ + + D+ G+ KS K + + Sbjct: 210 YISAPTDRIIANPDTITGSIGVIWIFENKSGYYDEEGIEHWVAKSGEFKDMGGDWRNLTE 269 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 K ++VV ++ FV V+ RN+ ++ L LSDGR++TGA+A +GL+D G + Sbjct: 270 KEKIYAEEVVMDAFSRFVDEVAVGRNMSREQVLNLSDGRVYTGADAIDLGLVDETGNIYD 329 Query: 233 VWQSLYALGVDQSIRKIKDWNPP 255 LG +IK N P Sbjct: 330 AIDIAAELGNCTGEPEIKYMNKP 352 >gi|269302396|gb|ACZ32496.1| putative signal peptide peptidase SppA, 36K type [Chlamydophila pneumoniae LPCoLN] Length = 333 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 14/220 (6%) Query: 34 NSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +P +A I ++ I S Q ++E E+ D +++ + PGG + + I Sbjct: 60 TAPIIAVIEMKDVIASSKNTAKTIQNILEGFEKAPLKDRVKGIVIDMDCPGGEVFEIDRI 119 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VK 142 + ++ K RK P+ V+ + AS GY +SCA+ I A +SL+GSIGV P+ VK Sbjct: 120 YSMLRFWKERKGFPIYIYVNGLCASGGYYVSCAATKIYATSSSLIGSIGVR-SGPFFNVK 178 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L++ GV + + KA +P+ + Q +D Y FV +V+++R + Sbjct: 179 EGLNRYGVESDLLTAGKDKAPMNPYIPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTK 238 Query: 203 KTLVLSDG-RIWTGAEAKKVGLIDVVGG-QEEVWQSLYAL 240 + LV + G RI++ +AK+ G IDVVG +E+V Q + A+ Sbjct: 239 EKLVHTLGARIFSPEKAKQEGYIDVVGATKEQVLQDIVAV 278 >gi|308049662|ref|YP_003913228.1| signal peptide peptidase SppA, 67K type [Ferrimonas balearica DSM 9799] gi|307631852|gb|ADN76154.1| signal peptide peptidase SppA, 67K type [Ferrimonas balearica DSM 9799] Length = 611 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 3/178 (1%) Query: 56 RIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 R+ R +R D+ A+++ + S GGSAYA E I + + ++ KPVI + +AAS GY Sbjct: 351 RLLREARQDEKVKAVVLRVDSGGGSAYASEQIRQEVLALQAAGKPVIASMGSVAASGGYW 410 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS ++ I A T++ GSIG++ + +GV V ++ M A S + Sbjct: 411 ISANADRIFAQPTTITGSIGIIGLITTFEDSAAAVGVYADGVGTTEM-AGLSVLRPLPDG 469 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 +++Q +D Y F++LVS +R++P ++ ++ GRIW+G A +GL+D +G E Sbjct: 470 FKRIVQQGLDKGYQDFIQLVSSARDLPLEQVDNIAQGRIWSGKAALDLGLVDEMGDLE 527 >gi|220924243|ref|YP_002499545.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219948850|gb|ACL59242.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 287 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 4/179 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNI 120 D A A++V+ SPGGSA I R I+ + + PV+ V ++AAS GY+I+CA++ Sbjct: 60 DIKAVAIVVN--SPGGSAAQSHLIHRRIRVLAAEAKVPVLAFVEDVAASGGYMIACAADE 117 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A +SLVGSIGV+ + L++LGV + + P KA PF +P V ++ Sbjct: 118 IIADPSSLVGSIGVVSAGFGFQGLLERLGVERRVHTTGPSKAMLDPFRPEDPADVARLKG 177 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F LV R L G +W+G + +GL+D +G V + Y Sbjct: 178 IQADIQAMFTELVRSRRPRLSGDPDELFSGAVWSGRQGLALGLVDALGDVRTVLRERYG 236 >gi|194324040|ref|ZP_03057815.1| peptidase [Francisella tularensis subsp. novicida FTE] gi|194321937|gb|EDX19420.1| peptidase [Francisella tularensis subsp. novicida FTE] gi|328676188|gb|AEB27058.1| Signal peptide peptidase SppA, 36K type [Francisella cf. novicida Fx1] Length = 270 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 36 PHVARIAIRGQIEDSQEL-IERIERISRDD-----SATALIVSLSSPGGSAYAGEAIFRA 89 PH+A I + G I D E ERI + S DD S +IV ++SPGGS + I+ Sbjct: 19 PHIALIKVNGVIADDAEANAERINQ-SLDDAYANKSVKGVIVEINSPGGSPVQSDEIYSH 77 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q ++++ P I ++ AS GY I+ + I A + ++ GSIGV+ +D Sbjct: 78 MQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGSGFGFTGLMD 137 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 KLG+ ++ S K PFS P+ + ++D ++ F+ V +SR DK + Sbjct: 138 KLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKKLLDQTHQVFIAAVEKSRGDRLKDKNI 197 Query: 206 VLS-DGRIWTGAEAKKVGLID 225 + G ++G +A+++GLID Sbjct: 198 DTTFSGEPFSGIQAQQMGLID 218 >gi|206601560|gb|EDZ38043.1| Signal peptide peptidase, SppA [Leptospirillum sp. Group II '5-way CG'] Length = 349 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 2/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 + + + D +++ + S GGS A + ++ +++ K + PV+ + +M AS Y + Sbjct: 102 LRKAAEDPRVRGIVLLIDSAGGSVTASDRVYHLVREFKQKSGIPVMAMIGDMGASGAYYV 161 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S A++ + TS+VGSIGV+ V + K+GV +++ S K SP + K Sbjct: 162 SVAADEVWTHPTSVVGSIGVVIFNVGVTGLMKKIGVEDRTLSSGAEKEMGSPLKPMTDKD 221 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + Q ++ Y F +VS +R I D L+DGRI+T +A K L+D +G ++++ Sbjct: 222 RSLFQGLISDLYTQFFDIVSRNRQIAPDILKPLADGRIFTARQALKNHLVDRIGYRDDLI 281 Query: 235 QSLYAL 240 + L L Sbjct: 282 RHLKRL 287 >gi|170748571|ref|YP_001754831.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] gi|170655093|gb|ACB24148.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] Length = 285 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 5/180 (2%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVA 123 A AL+++ SPGGS I R I+ + + K PVI V ++AAS GY+I+CA++ IVA Sbjct: 63 AVALVIN--SPGGSPAQSHLIHRRIRALADEKGVPVIAFVEDVAASGGYMIACAADEIVA 120 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 TS+VGSIGV+ L+KLGV + K+ PF +P V+ ++ + Sbjct: 121 DPTSIVGSIGVVSAGFGFHGLLEKLGVERRVHTQGEAKSMLDPFRPEDPADVERLKRIQA 180 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 F LV+ +R + L G +WTG +A +GL+D +G ++ + VD Sbjct: 181 DVQDLFTGLVT-ARRPTLSRAENLFTGAVWTGRQALPLGLVDALGDVRTAMRARFGDKVD 239 >gi|114332358|ref|YP_748580.1| peptidase S49 [Nitrosomonas eutropha C91] gi|114309372|gb|ABI60615.1| peptidase S49 [Nitrosomonas eutropha C91] Length = 317 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 37 HVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A + +RG+I ++ + +++ D + A+I+ ++SPGGS +I I Sbjct: 68 HTALVDLRGEITADGLNSAENINTGLKKAFEDKNTAAVILRINSPGGSPVQAGSINDEIH 127 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + P I V ++ AS GY I+ A++ I + S+VGSIGVL L+KL Sbjct: 128 RLRTQHPDIPLYAVVEDICASGGYYIAVAADKIFVDKASIVGSIGVLMDGFGFTGTLEKL 187 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + + + K PFS +P + + ++ + F+++V + R + Sbjct: 188 GIERRLLTAGENKGFLDPFSPSDPGQREHAKKMLVEIHQQFIQVVQDGRGDRLKDNPEIF 247 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G +WTGA + ++GL D +G + V Sbjct: 248 SGMVWTGARSIELGLADALGSMDYV 272 >gi|213962885|ref|ZP_03391145.1| signal peptide peptidase SppA, 67K type [Capnocytophaga sputigena Capno] gi|213954542|gb|EEB65864.1| signal peptide peptidase SppA, 67K type [Capnocytophaga sputigena Capno] Length = 590 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 95/185 (51%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 R ++ ++ +I + + + A+++ ++SPGG A A E + R I+ K +K V + Sbjct: 325 RAEVVGNETIIRALRKAADKKEVKAIVLRINSPGGDALASELMHREIEITKKKKKVYVSM 384 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 AAS GY I+C +N I A E ++ GSIGV P V G++ ++V + P Sbjct: 385 GNYAASGGYYIACNANRIFAEEGTITGSIGVFGVIPNVNALATNWGITAETVSTHPNAQW 444 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + + + + M + ++ Y F+ V++ R + ++ GR+W+G EA GL Sbjct: 445 YSLYQKPTEQFRKEMTESIEQVYTVFLDRVAQGRGKTVAQIDSIAQGRVWSGKEALANGL 504 Query: 224 IDVVG 228 +D +G Sbjct: 505 VDELG 509 >gi|262200199|ref|YP_003271407.1| peptidase S49 [Gordonia bronchialis DSM 43247] gi|262083546|gb|ACY19514.1| peptidase S49 [Gordonia bronchialis DSM 43247] Length = 297 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 11/190 (5%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITE 102 G D+ E I ++R + A++V ++SPGGS E I I+++ + K PV+ Sbjct: 39 GLTTDAVEPI--LKRAFETERLKAVVVVVNSPGGSPAQSEYIAERIRQLASEKGVPVLAF 96 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ++AAS GY I+CA++ I AA TS+VGSIGV+ + L + GV + S KA Sbjct: 97 CEDVAASGGYWIACAADEIFAAHTSIVGSIGVVSSGFGLADVLSRFGVERRLYTSGDNKA 156 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR----NIPYDKTLVLSDGRIWTGAEA 218 FS P+ V+ ++ + + F+ V + R N P D+ L G +W G+ A Sbjct: 157 RLDTFSPAVPEDVEWLKGLQHQLHEAFITWVRQRRGRKLNAPDDQ---LFSGDVWVGSNA 213 Query: 219 KKVGLIDVVG 228 +VGL+D +G Sbjct: 214 AEVGLVDGIG 223 >gi|260494495|ref|ZP_05814625.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] gi|260197657|gb|EEW95174.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] Length = 551 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLE--IPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDIFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 463 GGRVWLGSQAKENGLVDELGSLNDCIDSL 491 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 11/236 (4%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-LIERIERIS 61 F+L K K + +SL + V F+ + VED ++ I+I + S E L++ +E + Sbjct: 27 FILGKFKNK-DKISLKGVKTVVFNLNELVED--YMISTISINKTL--SHEVLLKALENLV 81 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D +I+ + S E + +K+ K +I + Y +S +N I Sbjct: 82 NDKKIKKIIIDVDEVDLSRVHIEELKGIFEKLSVNKEIIA-IGTTFDEYSYQVSLLANKI 140 Query: 122 VAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQM 177 T S + G ++ PY K L GV++ ++ K FS +++ + + Sbjct: 141 YMLNTKQSCLYFRGYEYKEPYFKNILATFGVTVNTLHIGDYKVAGESFSNNKMSEEKKES 200 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + ++ ++ + F+ LV E R + K ++ D +A ++GLID + EE+ Sbjct: 201 LINIKETLFQNFINLVKEKRKVDITKEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|300112959|ref|YP_003759534.1| peptidase S49 [Nitrosococcus watsonii C-113] gi|299538896|gb|ADJ27213.1| peptidase S49 [Nitrosococcus watsonii C-113] Length = 325 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 118/232 (50%), Gaps = 17/232 (7%) Query: 35 SPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +PH A + I G I +++ + + ++ ++ LI+ ++SPGGS I Sbjct: 74 APHTALVNIEGIIGADSFANAENIKKGLKAAFENEHIAGLILHINSPGGSPVQASQINDQ 133 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFL 145 + +++ + P I + ++ AS GY I+ A++ I A + S+VGSIG L + +V+ + Sbjct: 134 VHQLRKKHPDIPIHAVITDICASGGYYIAVAADQIYADKASIVGSIGALINSFGFVEA-M 192 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLG+ + + K PFS + Q +Q ++D+ F+++V ++R Sbjct: 193 EKLGIERRLFTAGDYKGFLDPFSPMKEFEAQHIQKMLDNIQKQFIQVVKDNRGDRLKNDS 252 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP-PK 256 L G +WTG +A +GLID +G V + + +G + KI D+ P PK Sbjct: 253 SLFTGLVWTGEQAIDLGLIDGLGNSSYVAREI--IGAE----KIIDYTPKPK 298 >gi|237744633|ref|ZP_04575114.1| protease IV [Fusobacterium sp. 7_1] gi|229431862|gb|EEO42074.1| protease IV [Fusobacterium sp. 7_1] Length = 551 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLE--IPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDIFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 463 GGRVWLGSQAKENGLVDELGSLNDCIDSL 491 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 9/235 (3%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+L K K + +SL + V F+ + VED ++ I+I + + L++ +E + Sbjct: 27 FILGKFKNK-DKVSLKGVKTVVFNLNELVED--YMISTISINKTL-SHEALLKALENLVN 82 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D +I+ + S E I +K+ K +I + Y ++ +N I Sbjct: 83 DKKIEKIIIDVDEVDLSRVHIEEIKEIFEKLSVNKEIIA-IGTTFDEYSYQVALLANKIY 141 Query: 123 AAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMM 178 T S + G ++ PY K L GV++ ++ K FS +++ + + + Sbjct: 142 MLNTKQSCLYFRGYEYKEPYFKNILATFGVTVNTLHIGDYKVAGESFSNNKMSEEKKESL 201 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ ++ + F+ LV E R + K ++ D +A ++GLID + EE+ Sbjct: 202 INIKETLFQNFINLVKEKRKVDITKEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|154245323|ref|YP_001416281.1| peptidase S49 [Xanthobacter autotrophicus Py2] gi|154159408|gb|ABS66624.1| peptidase S49 [Xanthobacter autotrophicus Py2] Length = 295 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 5/179 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIV 122 SA A+ + ++SPGGS IFR I+ + + K V V + AAS GY+I+CA++ I Sbjct: 65 SAPAVALLINSPGGSPVQSHLIFRRIRALAEEKEKHVFAFVEDAAASGGYMIACAADEIF 124 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A S+VGSIGV+ ++KLGV + + K PF P+ V+ + ++ Sbjct: 125 ADPCSIVGSIGVVTAGFGFDKAIEKLGVERRVYTAGERKVTLDPFRPTRPEDVERLDVLL 184 Query: 183 DSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + FV LV R+ +P D + S G W G +A +GL+D +G + ++ Y Sbjct: 185 KELHTVFVDLVRSRRSDALPADDESLFS-GEFWLGTQAAGLGLVDGLGDVRSILKARYG 242 >gi|331005266|ref|ZP_08328658.1| putative peptidase [gamma proteobacterium IMCC1989] gi|330420943|gb|EGG95217.1| putative peptidase [gamma proteobacterium IMCC1989] Length = 328 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 17/229 (7%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRG-----QIEDSQELIERIERISRDDSAT 67 + + +V + V S +H HV + + G Q ++ +L + + S+ Sbjct: 49 IYIVVVFVGVARQSQVTHYASTEEHVGIVYLDGAIAADQTANANDLASALRAAFANTSSK 108 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+I++++SPGGS ++ I++++ K + + ++ AS GY I+ A++ I A Sbjct: 109 AVILAINSPGGSPVQSGYVYDEIKRLRAIHTDKKLYAVISDLGASGGYYIAAAADEIYAD 168 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++SLVGSIGV ++KLGV +S S K PF+ + V+DS Sbjct: 169 KSSLVGSIGVTASSFGFVGLMEKLGVERRSYTSGEHKGFLDPFAPQRKDETIFWESVLDS 228 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSD-----GRIWTGAEAKKVGLIDVVG 228 ++ F+R V E R LV D G IW G +A + GLID +G Sbjct: 229 THEQFIRAVEEGRG----DRLVAGDEDIYSGLIWNGEQALEKGLIDGLG 273 >gi|76800828|ref|YP_325836.1| signal peptide peptidase [Natronomonas pharaonis DSM 2160] gi|76556693|emb|CAI48265.1| probable signal peptide peptidase [Natronomonas pharaonis DSM 2160] Length = 335 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 3/188 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +++E+IE DD+ AL++ L++PGG+ + I A + P + + AS Sbjct: 98 ADDIVEQIEDADADDNVEALLLRLNTPGGAVVPSDDIRLAAEAFDG--PTVAYTTDACAS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY I+ + + A S+VGSIGV LD+ GV + + + K PF + Sbjct: 156 GGYWIASGCDELWARRGSVVGSIGVRGSRMTAAELLDRAGVEYEQLTAGEYKEAGVPFDD 215 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + Q +Q +VD Y FV V+E R + + ++ +++ G EA + GL+D +G Sbjct: 216 LGDDERQYLQGIVDDYYDQFVETVAEGREME-PSAVRETEAKVFLGEEAFERGLVDDLGT 274 Query: 230 QEEVWQSL 237 ++EV + L Sbjct: 275 KDEVCERL 282 >gi|289764414|ref|ZP_06523792.1| protease IV [Fusobacterium sp. D11] gi|289715969|gb|EFD79981.1| protease IV [Fusobacterium sp. D11] Length = 306 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 40 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 99 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 100 KLKKLE--IPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 157 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 158 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 217 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 218 GGRVWLGSQAKENGLVDELGSLNDCIDSL 246 >gi|167919892|ref|ZP_02506983.1| peptidase, U7 family protein [Burkholderia pseudomallei BCC215] Length = 580 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 15/244 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIE-----DSQELIER 56 +I R+ L++ L + F++ S D H A + I G+I +++++ Sbjct: 20 RIFFRFAFLAV--LGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTA 77 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 ++ D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY Sbjct: 78 LDSAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYY 137 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 138 IAAAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPK 197 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V Sbjct: 198 MDAHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTV 257 Query: 234 WQSL 237 + + Sbjct: 258 ARDV 261 >gi|281209653|gb|EFA83821.1| hypothetical protein PPL_02889 [Polysphondylium pallidum PN500] Length = 848 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 11/198 (5%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D + A+I+ + SPGGS A + I++ K K VI + +AAS GY ISC ++ I Sbjct: 559 DKTIKAIIIRVDSPGGSYQASCIVHFEIERAKKAGKKVIALMGSVAASGGYFISCNADKI 618 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK----SSPMKAEPSPFSEV-NPKAVQ 176 VA ++ GSIGVL ++ L+K+GVS ++K + + FS + N Q Sbjct: 619 VAQHGTITGSIGVLLGKLNIRKPLEKIGVSFDNLKINERDDTVGDNSNLFSSLYNYSEAQ 678 Query: 177 M--MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + + +D Y F V++ RN+ ++ ++ GR+W+G +A + L+D +GG E Sbjct: 679 LNTLNHELDEIYGDFKSKVAQGRNLSMEQVEEVARGRVWSGQQAFERKLVDRIGGLNEAI 738 Query: 235 Q---SLYALGVDQSIRKI 249 + L LG D + I Sbjct: 739 EETKELLKLGKDDKVELI 756 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 88/186 (47%), Gaps = 14/186 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMA- 107 +++++ I + + D T LI + + ++A + I A++ ++++ K + Sbjct: 278 RDIVDGIRKAADDPKVTGLIFRIGTHFAMSFAHIQEIRDAVRYMRSKGKKTLFYADSFGE 337 Query: 108 ---ASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMK 161 A+ Y ++ A I S VGS+ ++ P++K L+KL + + ++ K Sbjct: 338 FSNANITYYLASAFETIY---MSPVGSLCIVNWGIDAPFIKKTLEKLEIVPEFLRRREFK 394 Query: 162 AEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 + + F+E + P + MQ ++DS ++ +++ RN+ D +T A+A+ Sbjct: 395 SAANMFTEEKMTPSERESMQSILDSLFNQMTEGIAQDRNLLVDDVSRYFASGPFTAAKAE 454 Query: 220 KVGLID 225 + LID Sbjct: 455 SLKLID 460 >gi|224372341|ref|YP_002606713.1| PfaP [Nautilia profundicola AmH] gi|223589924|gb|ACM93660.1| PfaP [Nautilia profundicola AmH] Length = 300 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 119/236 (50%), Gaps = 15/236 (6%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYF---------SWSSHVEDNSPHVARIAIRGQI--EDSQ 51 F +K IK + V+ ++ L + + S + P+VA I I I + Sbjct: 15 FKIKAIKEKVVLFGVILLILAELVALGVFLKKTLSPSIPITKPYVAVININKTITVDYIN 74 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 +L++++ + +D + ++ ++PGGS A + F A K N+ K V V MAAS Sbjct: 75 KLMDKMNALKKDKNCKEYLLVFNTPGGSPSASDE-FNAYLKFLNKSKKVNVYVESMAASG 133 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I A IVA + ++VGSIGV+ + + K+GV + K S F + Sbjct: 134 GYYIISAIKPIVANKNAVVGSIGVIMPHYVIGKLAKKIGVEEDDITVGKYKKPISLFKKA 193 Query: 171 NPKAVQ-MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +P+ + +M++++ +Y F+++V+E RNI DK ++G+I+ + K V L+D Sbjct: 194 SPEQKEYIMKNLLLPTYDNFLKIVAEDRNISIDKLKNYAEGKIFIATKVKGV-LVD 248 >gi|153007859|ref|YP_001369074.1| peptidase S49 [Ochrobactrum anthropi ATCC 49188] gi|151559747|gb|ABS13245.1| peptidase S49 [Ochrobactrum anthropi ATCC 49188] Length = 290 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 15/246 (6%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ D A+ +SL+SPGGS I+R I+ + +++K V V ++AAS GY+I Sbjct: 49 LEKAFTDKETPAVAISLNSPGGSPVQSRLIYRRIRDLAAEHQKKVFIFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ ++ + + F+ +V E R + L G WTG + ++GLID +G Sbjct: 166 KTDIERLKSLQLEIHETFIDMVKERRGTKLAEDKDLFTGLFWTGIKGHELGLIDGLGDMR 225 Query: 232 EVWQSLYALG-----VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + Y V+Q + P + +L+ SI++ L D L+ + + Sbjct: 226 SFLRKTYGDKVKLKLVEQKRGLLGRKMPGIDMALGNLEPASIAAHLGDG--LLSVAEEKA 283 Query: 287 LWAVWN 292 LW + Sbjct: 284 LWGRYG 289 >gi|256026400|ref|ZP_05440234.1| protease IV [Fusobacterium sp. D11] Length = 334 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 68 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 127 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 128 KLKKLE--IPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 185 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 186 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 245 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G++AK+ GL+D +G + SL Sbjct: 246 GGRVWLGSQAKENGLVDELGSLNDCIDSL 274 >gi|148253845|ref|YP_001238430.1| putative serine protease SohB [Bradyrhizobium sp. BTAi1] gi|146406018|gb|ABQ34524.1| putative serine protease SohB [Bradyrhizobium sp. BTAi1] Length = 283 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 3/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER +A A+ + ++SPGGS I+ I+++ K PV+ V ++AAS GY+I Sbjct: 43 LERAFAMRNAKAVALVINSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMI 102 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I +S++GSIGV+ ++ ++K+G+ + + KA PF NP A Sbjct: 103 ACAGDEIFCDPSSILGSIGVVSGSFGLQDLINKIGIERRLYTAGEHKAMLDPFLPENPDA 162 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V ++ + + F+ LV ESRN VL G W G A +GL D +G V Sbjct: 163 VARLKKIQREIHALFISLVKESRNGRLKSADDVLFTGEYWAGDTAVTLGLADGIGDLRAV 222 Query: 234 WQSLYA 239 ++ + Sbjct: 223 LRARFG 228 >gi|124515256|gb|EAY56766.1| Signal peptide peptidase, SppA [Leptospirillum rubarum] Length = 331 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 97/186 (52%), Gaps = 2/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 + + + D +++ + S GGS A + ++ +++ K + PV+ + +M AS Y + Sbjct: 84 LRKAAEDPRVRGIVLLIDSAGGSVTASDRVYHLVREFKRKSGIPVMAMIGDMGASGAYYV 143 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S A++ + TS+VGSIGV+ + + K+GV +++ S K SP + K Sbjct: 144 SVAADEVWTHPTSVVGSIGVVIFNVGITGLMKKIGVEDRTLSSGAEKEMGSPLKPMTDKD 203 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + Q ++ Y F +VS +R I D L+DGRI+T +A K L+D +G ++++ Sbjct: 204 RSLFQGLISDLYTQFFDIVSRNRQIAPDILKPLADGRIFTARQALKNHLVDRIGYRDDLI 263 Query: 235 QSLYAL 240 + L L Sbjct: 264 RHLKRL 269 >gi|49473968|ref|YP_032010.1| protease sohB [Bartonella quintana str. Toulouse] gi|49239471|emb|CAF25822.1| Protease sohB [Bartonella quintana str. Toulouse] Length = 283 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 25/233 (10%) Query: 41 IAIRGQIEDSQELIERIERISRDDS----------ATALIVSLSSPGGSAYAGEAIFRAI 90 + + G I DS ++ R + R S A A+ + ++SPGGS +F+ I Sbjct: 23 VRLHGAIMDSNSMLARTLSLGRCASLLDKAFAYKKAPAVALIINSPGGSPVQSRLLFKRI 82 Query: 91 QKV---KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPF 144 + + KN+K V + ++AAS GY+I+CA + I A +S++GSIGV+ F +P F Sbjct: 83 RDLAEEKNKK-VFVFIEDIAASGGYMIACAGDEIFADPSSIIGSIGVVSASFGFP---EF 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV + + K PF ++ ++ + + F+ LV E R Sbjct: 139 LKKIGVERRVYTAGKNKVTLDPFQPEKKADIEHLKSLQLEVHQTFIDLVKERRATKLSND 198 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L G W+G ++ ++GLID + V + + G K++ PPK+ Sbjct: 199 SDLFTGMFWSGRKSVELGLIDGLNDIRSVIKERFGSGT-----KLRLITPPKS 246 >gi|223995779|ref|XP_002287563.1| hypothetical protein THAPSDRAFT_261589 [Thalassiosira pseudonana CCMP1335] gi|220976679|gb|EED95006.1| hypothetical protein THAPSDRAFT_261589 [Thalassiosira pseudonana CCMP1335] Length = 457 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 3/197 (1%) Query: 38 VARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK- 94 VA + + G I S E+I + +I +D L++ ++SPGGS + EAI ++ ++ Sbjct: 235 VAVVTVDGGIGRSLAYEIISSLRKIRKDKDVKCLVLRVNSPGGSVVSSEAILEEVKALEI 294 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 PV+ + AAS GY IS + I A T+L GSIGV + G+ Sbjct: 295 VSLPVVCSMANYAASGGYYISTNAERIFAQPTTLTGSIGVYGIKFDASQWAKSYGIRSDY 354 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 A P + + + Y +F +V++ R++ + ++ GR+WT Sbjct: 355 YPHGSHGATVHPLTPLTQSMKLNLDRTTLGYYDYFKSIVAKGRSLSPQQVESIAQGRVWT 414 Query: 215 GAEAKKVGLIDVVGGQE 231 G +AK+VGL+D +GG E Sbjct: 415 GEQAKEVGLVDAIGGLE 431 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 17/189 (8%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +++EL++ I++ + D + +AL G + I+ ++N + E H + Sbjct: 2 EAKELVDIIQKAADDKNISALYADF----GEGMRYPVGYAHIEDIRNAVRIFNESHRPSY 57 Query: 109 SAGY--------LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + GY L S S++ + + SL G +++ LDK GV K Sbjct: 58 AFGYSFHWSEYFLASAFSHVHLQSRGSL-DLFGATVNNLFLRSALDKYGVKAHVFKHGDY 116 Query: 161 KAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL--VLSDGRIWTGA 216 K P+ F+E + ++ ++ + S + + SR + +D + +SD T Sbjct: 117 KTAPNVFTEKVYSKPHLETVKSMTASLNNTIRTCIRNSRALNFDDVMWQSISDYGSLTAV 176 Query: 217 EAKKVGLID 225 A+++GL+D Sbjct: 177 NAEEIGLVD 185 >gi|119713115|gb|ABL97184.1| protease IV a signal peptide peptidase [uncultured marine bacterium EB0_49D07] Length = 608 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 136/280 (48%), Gaps = 25/280 (8%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIED---------SQELIERIERISRDDSAT 67 T+ Y +++ +ED+ +A I G I + S +I++I +++ Sbjct: 304 TISYNEYANQMEDDFSESENEIAIITAEGAIMEGEISQGVAGSSGVIKQIRSAHENENTK 363 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 A++ ++SPGGS A E + + K + V+ + + AAS G IS ++ I A T Sbjct: 364 AIVFRVNSPGGSIIASEMMRDELFAAKTKGIKVVVSMGDYAASGGVYISTPADYIFAEPT 423 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P ++ +D +GV+ V +S P ++ ++ +Y Sbjct: 424 TITGSIGVAIALPTLENAMDYIGVNFDGVVTSKHGG-WDPTQAIDEDLDKIFASWGADAY 482 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV V++SR+ Y+ ++ GR+W AK++GL+D +GG ++ A+ ++ Sbjct: 483 DRFVNFVADSRSQSYEDIKAIAGGRVWIATSAKEIGLVDEIGGIDD------AIAYAVNL 536 Query: 247 RKIKDWNPPKNYWFCDL--KNLSISSLLEDTIPLMKQTKV 284 +++D+ Y+ +L + L I LLE+ +K+ KV Sbjct: 537 TELEDYQV--EYYGQELSPEELIIRELLENFDVSIKEPKV 574 >gi|30249027|ref|NP_841097.1| U7 family peptidase [Nitrosomonas europaea ATCC 19718] gi|30138644|emb|CAD84935.1| Peptidase family U7 [Nitrosomonas europaea ATCC 19718] Length = 317 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 37 HVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A + +RG+I +++ + +++ D + +I+ ++SPGGS +I I+ Sbjct: 68 HTALVDLRGEIAPDGLNNAENINNGLKKAFEDRNTAGVILRINSPGGSPVQAGSINDEIR 127 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ R P I V ++ AS GY ++ A++ I + S++GSIGVL L+KL Sbjct: 128 RLRIRYPDIPLYAVVEDICASGGYYVAVAADKIFVDKASVMGSIGVLMDGFGFTGTLEKL 187 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + + K PFS +P + + ++ + F+++V + R + Sbjct: 188 GVERRLLTAGENKGFLDPFSPSDPAQREHAKKILAEIHQQFIQVVQDGRGDRLKDNPEVF 247 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G +WTGA++ ++GL D +G + V Sbjct: 248 SGMVWTGAKSVELGLADALGNADYV 272 >gi|329897050|ref|ZP_08271822.1| protease IV, a signal peptide peptidase [gamma proteobacterium IMCC3088] gi|328921490|gb|EGG28876.1| protease IV, a signal peptide peptidase [gamma proteobacterium IMCC3088] Length = 604 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 18/174 (10%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIV 122 DS A+++ ++SPGGS A E I + + + PV+ + ++AAS G +S +++ I Sbjct: 358 DSTKAIVLRVNSPGGSIIASEMIRDEVSAAQRKGIPVVVSMGDVAASGGVWVSMSADKIY 417 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A T++ GSIGV +P + +D G++ V + AE + +S V P M D + Sbjct: 418 AEPTTISGSIGVAVAFPTFERVMDWAGINFDGVTT----AENTGWSPVLP-----MSDAL 468 Query: 183 D--------SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 D ++Y FV LV+E RN D ++ GR+W G+ A+++GL+D +G Sbjct: 469 DALFARWASTAYDRFVNLVAEGRNKEPDYIRSIAGGRVWIGSMAQELGLVDAMG 522 >gi|312795521|ref|YP_004028443.1| Signal peptide peptidase sppA [Burkholderia rhizoxinica HKI 454] gi|312167296|emb|CBW74299.1| Signal peptide peptidase sppA (EC 3.4.21.-) [Burkholderia rhizoxinica HKI 454] Length = 338 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 37 HVARIAIRGQI----EDSQELIERIERISRDDSATA-LIVSLSSPGGSAYAGEAIFRAIQ 91 H A +++ G+I S + I+ + + DDS TA +I+ ++SPGGS I I+ Sbjct: 86 HTALVSLNGEIAANSNASAQNIDAALQNAFDDSNTAGVILRINSPGGSPVQAGIINTEIR 145 Query: 92 KVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++++ KP+ V ++ AS GY ++ A++ I + S+VGSIGV V +DKL Sbjct: 146 RLRDKYPSKPLYVVVEDICASGGYYVAAAADKIYVDKASIVGSIGVRMDGFGVTGLMDKL 205 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + S K PFS + K Q Q ++D + F+ V + R +T + Sbjct: 206 GIERRMHTSGENKGFYDPFSPESDKMKQHAQHMLDDIHAQFIAAVRQGRGKRLKETPDMF 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G WTG ++ ++GL D G + V Sbjct: 266 SGLFWTGDKSVELGLADGFGSTDYV 290 >gi|148259074|ref|YP_001233201.1| acid phosphatase [Acidiphilium cryptum JF-5] gi|326402225|ref|YP_004282306.1| putative peptidase S49 [Acidiphilium multivorum AIU301] gi|146400755|gb|ABQ29282.1| Acid phosphatase [Acidiphilium cryptum JF-5] gi|325049086|dbj|BAJ79424.1| putative peptidase S49 [Acidiphilium multivorum AIU301] Length = 580 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 13/198 (6%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKVKNRKPVITEVH 104 D L I D S A+++ L +PGG SA G + RA + KP+I + Sbjct: 325 DPARLAHEIATAVADPSIRAIVLRLDTPGGTVTGSAMVGAEVARA---ARLHKPLIVSMG 381 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP---MK 161 + AS GY IS ++VA +L GSIGVL L +LGVS+ + Sbjct: 382 ALDASGGYWISSHGAVLVADPATLTGSIGVLGGKFSFGGLLARLGVSVSTASRGANALFD 441 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + +P++E + +Q +D Y FV V+ R + + + GR+WTGA+A+ Sbjct: 442 SAVTPWTEAQ---LASLQGQLDLDYQKFVGWVAAGRRMSPAQVNAVGQGRVWTGAQARSR 498 Query: 222 GLIDVVGGQEEVWQSLYA 239 GL+D +GG E + ++ A Sbjct: 499 GLVDRLGGYHEAFMTVRA 516 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 11/149 (7%) Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A FRAI + + V+ + G Y+++ A+N I ++ G G+ Q P+ Sbjct: 126 ARFRAI----SHRQVVARAMSFDGAEGLGAYIVATAANRIELSDAGDFGVTGLALQSPFA 181 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK--AVQMMQDVVDSSYH-WFVRLVSESRN 198 L GV + K P F+ P A +MM + S Y V + + + Sbjct: 182 ADLLKMAGVEAQFEHIGKYKTYPELFTRSGPSAAATEMMNSLAGSLYDSALVPIAARLKR 241 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 P D+ L D ++ A+AK+ GL+D V Sbjct: 242 SP-DQVKALFDQAPFSAAQAKQDGLVDTV 269 >gi|294785545|ref|ZP_06750833.1| protease IV [Fusobacterium sp. 3_1_27] gi|294487259|gb|EFG34621.1| protease IV [Fusobacterium sp. 3_1_27] Length = 551 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAVINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLE--VPIYISMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G +AK+ GL+D +G + SL Sbjct: 463 GGRVWLGNQAKENGLVDELGSLNDCIDSL 491 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G ++ PY K L LGV++ ++ K FS +++ + + + ++ ++ + F+ Sbjct: 154 GYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFI 213 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 LV E R + ++ D +A ++GLID + EE+ Sbjct: 214 NLVKEKRKVDITNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|331694042|ref|YP_004330281.1| peptidase S49 [Pseudonocardia dioxanivorans CB1190] gi|326948731|gb|AEA22428.1| peptidase S49 [Pseudonocardia dioxanivorans CB1190] Length = 293 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 2/174 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER D A+ + ++SPGG+ I I+ + K PV+ ++AAS GY + Sbjct: 57 LERAFSADGLVAVALQINSPGGAPTQSALIADRIRGLAEEKEVPVLAFCEDVAASGGYWL 116 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I A TS+VGSIGV+ ++ +++ GV + + K+ PF P+ Sbjct: 117 ACAGDEIYAHATSIVGSIGVISAGFGLQGLIERFGVERRLYTAGRAKSRLDPFLPEKPED 176 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+ ++ + D + F V+E R + L G +WTGA A + GLID +G Sbjct: 177 VEWLRGLQDQLHEMFTMWVTERRGDRLNTERDLFTGEVWTGARAVETGLIDGLG 230 >gi|189499532|ref|YP_001959002.1| signal peptide peptidase SppA, 67K type [Chlorobium phaeobacteroides BS1] gi|189494973|gb|ACE03521.1| signal peptide peptidase SppA, 67K type [Chlorobium phaeobacteroides BS1] Length = 596 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 1/198 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D + L ++ D+S A+++ + SPGG A A + + + + +KP++T + +AA Sbjct: 326 DEETLRSSVQAALDDESVKAIVLRIDSPGGDALASANMLQVLDSARVKKPIVTSMSSVAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY+I+ A++ I A ++ GSIGV P + +K+ ++ + + F Sbjct: 386 SGGYMIALAADSIFAEPLTVTGSIGVYALKPEISKLQEKIALNREVFTRGKNADAYTVFK 445 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + + Y F+ V SR + ++ ++ GR+W G A K GL+D +G Sbjct: 446 PLDEAGMAKFMETTGWIYDDFLDKVVRSRKMTREEVDAVAGGRVWMGEAAVKNGLVDRIG 505 Query: 229 GQEEVWQSLYAL-GVDQS 245 G E ++ L G+D + Sbjct: 506 GLPEALRAAQVLAGIDSA 523 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/190 (20%), Positives = 96/190 (50%), Gaps = 3/190 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 Q++I ++R S D +++ + + + I RAI++ +N ++ A Sbjct: 73 QDIIFLLDRASEDTRIKGILLDIDGVRTGSAKIQQIQRAIERTRNSGKLVNAFLRNAGDQ 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 ++ A + ++A + + G+ + + L+KLGVS ++V+ + K+ PF+ + Sbjct: 133 DVWLASACDAMIAERGNFLLLDGLRAELLFYTGTLEKLGVSFQAVQWTDWKSGVEPFTRL 192 Query: 171 --NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVV 227 +P+ + ++ +DS Y + V++ R+IP + +++++ + + +AK++ ++D V Sbjct: 193 AASPEFRERIEMSLDSVYAAYTGYVTKQRDIPLETYEIIINEKTVLSADQAKELKVVDEV 252 Query: 228 GGQEEVWQSL 237 G E + L Sbjct: 253 NGHWEYLERL 262 >gi|154150450|ref|YP_001404068.1| signal peptide peptidase SppA, 36K type [Candidatus Methanoregula boonei 6A8] gi|153999002|gb|ABS55425.1| signal peptide peptidase SppA, 36K type [Methanoregula boonei 6A8] Length = 282 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 3/179 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S+ + ++ + D A+++ + SPGGS A E I ++ K +KPV+ + MA S Sbjct: 74 SEYVGNQLRDAADDPMVDAIVLRVDSPGGSPAAAEEIIGDLEYAKTKKPVVVSMGSMATS 133 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A Y +S +N I A +L G++GV++ + + ++ + G ++ VKS K + Sbjct: 134 AAYYVSAHANEIYADPDTLTGAVGVIWTFSDISDWMKQEGYNVTVVKSGDFKDMGADSHA 193 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + P Q +V+ S+ F+ V+ R I + DGR+ GA+A K+ L+D +G Sbjct: 194 LTPAEQAYAQQIVNESFQEFINDVTTQRMIAKSD---IEDGRVIRGADAIKINLVDKLG 249 >gi|330962630|gb|EGH62890.1| peptidase S49, SppA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 332 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 14/231 (6%) Query: 12 YVMLSLVTLTVV----YFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISR 62 + +L+ V L V + + H A I ++G I D ++ ++ + Sbjct: 50 FKLLTFVFLFVAVVLPMLDFEGGTSRRASHTALIDVQGVIADKESASAENIVTALRDAFE 109 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASN 119 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ Sbjct: 110 DEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAEKPDIKVYAVITDLGASGAYYIASAAD 169 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A + SLVGSIGV ++KLGV ++ S KA PF Q Q Sbjct: 170 QIYADKASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKTDETQFWQ 229 Query: 180 DVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V+D+++ F+ V + R + L G IWTG +A +GL+D +G Sbjct: 230 SVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVGLGLVDGLG 280 >gi|42525822|ref|NP_970920.1| signal peptide peptidase SppA [Treponema denticola ATCC 35405] gi|41815872|gb|AAS10801.1| signal peptide peptidase SppA [Treponema denticola ATCC 35405] Length = 609 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 17/238 (7%) Query: 45 GQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVI 100 G+I+DS ++++ + D + A++V ++S GG +A E I RAI + K PV+ Sbjct: 340 GRIDDSAVSYKIVDLFDIAQGDPTVKAIVVRVNSGGGEVFASEEIRRAIDRAKASGLPVV 399 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSP 159 + +AAS Y IS +++ I A+ ++ GSIGVL P K + K LG++ V S Sbjct: 400 VSMGSVAASGAYWISSSADYIFASPYTITGSIGVLATAPSFKEAVKKYLGITSDLVYSG- 458 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 K S E +P+ ++ Q V Y F+ V+ RN+P L+ GR+++G +A Sbjct: 459 QKPSYSVLEEPSPEEKEVRQMEVMHIYKTFIETVARGRNLPEKTVEELAGGRVYSGEQAL 518 Query: 220 KVGLIDVVGGQEEVWQ---SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + L+D +G +E + L + S+++IK P I S+LED Sbjct: 519 NLKLVDALGSLDEAVKYAAELANISGQYSVKEIKKPLP--------FTEALIKSILED 568 >gi|62184771|ref|YP_219556.1| putative exported protease [Chlamydophila abortus S26/3] gi|62147838|emb|CAH63584.1| putative exported protease [Chlamydophila abortus S26/3] Length = 335 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 15/212 (7%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ-- 91 +S H A+I QE I ++ D +I+ + PGG + ++ IQ Sbjct: 77 SSKHTAKII--------QEAITTLDSPPYKDRVKGIIIDMDCPGGEVFEISRVYSTIQFW 128 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLG 149 K + + PV V+ + AS GY ++CA++ I + +SL+GSIGVL PY VK L + G Sbjct: 129 KQRTQCPVYVFVNGLCASGGYYVACAADKIYSTSSSLIGSIGVL-SGPYFNVKEGLSRYG 187 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLS 208 V + + KA +P++E K ++ Q+++D Y FV +V +R + DK + + Sbjct: 188 VQSDLLIAGKDKAPMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPLLTKDKLVSVL 247 Query: 209 DGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYA 239 R+++ +A + G IDV +++V Q L A Sbjct: 248 GARLYSPEKALEEGYIDVTNVTKQQVLQDLVA 279 >gi|237741816|ref|ZP_04572297.1| protease IV [Fusobacterium sp. 4_1_13] gi|229429464|gb|EEO39676.1| protease IV [Fusobacterium sp. 4_1_13] Length = 551 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAVINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLE--VPIYISMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G +AK+ GL+D +G + SL Sbjct: 463 GGRVWLGNQAKENGLVDELGSLNDCIDSL 491 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G ++ PY K L LGV++ ++ K FS +++ + + + ++ ++ + F+ Sbjct: 154 GYEYKEPYFKNILATLGVTVNTLHIGDYKVSGESFSNDKMSEEKKESLINIKETLFQNFI 213 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 LV E R + ++ D +A ++GLID + EE+ Sbjct: 214 NLVKEKRKVDITNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|254293569|ref|YP_003059592.1| signal peptide peptidase SppA, 36K type [Hirschia baltica ATCC 49814] gi|254042100|gb|ACT58895.1| signal peptide peptidase SppA, 36K type [Hirschia baltica ATCC 49814] Length = 590 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 3/187 (1%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEV 103 QI S + +I +D+S A++ + S GGS A + I+ AI+ V+N KPV+ + Sbjct: 318 QIIASDTVSSQIYDAGKDESIKAIVFRVDSGGGSPTASDQIWNAIEYVQNTYNKPVVISM 377 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK-SSPMKA 162 +AAS GY IS ++ I A ++ GSIGV + L K+GV+ + P + Sbjct: 378 GSVAASGGYYISMGADKIYANRATITGSIGVYGGKFALAEGLRKIGVNPSRIDVGGPYAS 437 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + ++ + M+ + +Y F RL ++ R + + ++ GR+WTG AK+ G Sbjct: 438 IYTSTERLSEQQRATMRASLARTYDRFTRLAADGRGMSQEALHEIAKGRVWTGVAAKENG 497 Query: 223 LIDVVGG 229 L+D +GG Sbjct: 498 LVDELGG 504 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 26/222 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHE--MAA 108 +++ +++R + DD +++ S G + E I AI+K++ N K V+ + Sbjct: 73 DILTKLDRAATDDHVKGVVLRASEMGFGSSRAEEIRSAIKKLQANDKFVLAHSQGFFVGG 132 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS-----IKSVKSSPMKAE 163 A Y AS+ I S + G + ++K D LG+S K+SP + Sbjct: 133 PAAYRAISASDEIWLQAGSDLSIPGFSLETLFLKGLFDNLGISAEIEAFHEFKNSPNVYK 192 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI---------WT 214 + F+E + KA++ + + + W V L+ +I D+ ++D I ++ Sbjct: 193 ETDFTESHAKAMRELAEGL-----WQVSLI----DIANDRADKMADNAILRDVLENSPYS 243 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 +A +GL+D +G E++ + L + + I + P K Sbjct: 244 SDQALDLGLVDKLGWPEDLVRHAMGLAPNAELIDIAQYTPKK 285 >gi|295690720|ref|YP_003594413.1| signal peptide peptidase SppA [Caulobacter segnis ATCC 21756] gi|295432623|gb|ADG11795.1| signal peptide peptidase SppA, 67K type [Caulobacter segnis ATCC 21756] Length = 594 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 2/182 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S ++ + + D A++ +SSPGGS A E I A++ K PV+ + AA Sbjct: 326 SDDVAQAFRNATEDKDVKAIVFRVSSPGGSDTASEQILAAMKAAKAAGKPVVVSMGTYAA 385 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS ++ IVA ++L GSIGV + L + GV K + A+ Sbjct: 386 SGGYWISSQADAIVAQPSTLTGSIGVYGGKFAIGDALARFGVDTKQLHVGGDYAQAFGSG 445 Query: 169 E-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P+ +D Y F+ V+E R +P D+ ++ GR+WTG +AK++GL+D + Sbjct: 446 DGFTPEQRAKFAGWMDRIYAGFIIRVAEGRKLPADRVREIAKGRVWTGEQAKQLGLVDEL 505 Query: 228 GG 229 GG Sbjct: 506 GG 507 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 10/219 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 T V+ + D +P ++ G + +IE + R +DD A++V L G Sbjct: 41 TQAVLQLDLRQGLTDQAPRTPFASLGGGGDSVMSIIETLRRAEKDDKVRAILVRLPEGGV 100 Query: 79 SAYAGEAIFRAIQKVK--NRKPVITEVHEMAASA----GYLISCASNIIVAAETSLVGSI 132 + A + + A + + KP+ + S Y++ +++ S ++ Sbjct: 101 APAAADELRLAFKHFREVGGKPIYAHSQGLYPSGMVTSTYMLGASASEFWMQPDSSFQAV 160 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP--FSEVNPKAVQMMQDVVDSSYHW-F 189 G+ + + K F DK GV + K +P +S+ P + + S Y Sbjct: 161 GISSESMFFKRFFDKYGVKADYEQRYEYKNAVNPYLYSDYTPAHRESTLSWMGSVYRTAL 220 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V + + P T L DG ++ EA+ GLID VG Sbjct: 221 VSAAVDRKRDPLQLTRTLEDGP-YSAQEAQAKGLIDKVG 258 >gi|292572009|gb|ADE29924.1| Signal peptide peptidase SppA, 36K type [Rickettsia prowazekii Rp22] Length = 304 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 6/185 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ V + + Sbjct: 62 LESLNELIEKTFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKVYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + KA Sbjct: 119 DMAASGGYWLACSGDQIYALPSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKAVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++D+ Y FV V R + +L +G W G A GL Sbjct: 179 DPFKPINKDDLKIIKDLQKQVYEHFVEYVKNRRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVG 228 ID +G Sbjct: 239 IDGIG 243 >gi|257093133|ref|YP_003166774.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045657|gb|ACV34845.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 316 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 9/221 (4%) Query: 17 LVTLTVVYFSWSS-HVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALI 70 LV + V+ W + H A I + G IE S Q + + ++ D +I Sbjct: 44 LVAVLVMVVDWGGPEQRADGRHTAVIHLHGTIEASGEASAQNINDALQAAFGDKGTAGVI 103 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETS 127 + ++SPGGS + I++++ P I V ++ AS GY I+ A + I + S Sbjct: 104 LRVNSPGGSPVQAGIVHDEIRRLRTTHPQIPLYVVVEDLCASGGYYIAVAGDKIFVDKAS 163 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGVL +DKLG+ + + + K PFS + K + Q ++ + Sbjct: 164 IVGSIGVLMDAFGFTGTMDKLGIERRLLTAGENKGFLDPFSPQDAKQKEHAQVLLREIHK 223 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ +V R +T + G +WTG+++ K+GL D G Sbjct: 224 QFIEVVRRGRGPRLKETPEMFSGLMWTGSQSVKLGLADGFG 264 >gi|325475502|gb|EGC78683.1| signal peptide peptidase SppA [Treponema denticola F0402] Length = 495 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Query: 45 GQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVI 100 G+I+DS ++++ + D + A++V ++S GG +A E I RAI + K PV+ Sbjct: 226 GRIDDSAVSYKIVDLFDIAQGDPTVKAIVVRVNSGGGEVFASEEIRRAIDRAKASGLPVV 285 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSP 159 + +AAS Y IS +++ I A+ ++ GSIGVL P K + K LG++ V S Sbjct: 286 VSMGSVAASGAYWISSSADYIFASPYTITGSIGVLATAPSFKEAVKKYLGITSDLVYSG- 344 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 K S E +P+ ++ Q V Y F+ V+ RN+P L+ GR+++G +A Sbjct: 345 QKPSYSVLEEPSPEEKEVRQMEVMHIYKTFIETVARGRNLPEKTVEELAGGRVYSGEQAL 404 Query: 220 KVGLIDVVGGQEEV 233 + L+D +G +E Sbjct: 405 NLKLVDALGSLDEA 418 >gi|15604263|ref|NP_220779.1| protease SohB [Rickettsia prowazekii str. Madrid E] gi|3860955|emb|CAA14855.1| POSSIBLE PROTEASE SOHB (sohB) [Rickettsia prowazekii] Length = 308 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 6/185 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ V + + Sbjct: 66 LESLNELIEKTFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKVYSFIE 122 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + KA Sbjct: 123 DMAASGGYWLACSGDQIYALPSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKAVL 182 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++D+ Y FV V R + +L +G W G A GL Sbjct: 183 DPFKPINKDDLKIIKDLQKQVYEHFVEYVKNRRAGKLTQQDEILFNGEFWAGQTALDYGL 242 Query: 224 IDVVG 228 ID +G Sbjct: 243 IDGIG 247 >gi|319899201|ref|YP_004159294.1| protease [Bartonella clarridgeiae 73] gi|319403165|emb|CBI76724.1| protease [Bartonella clarridgeiae 73] Length = 282 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 36/260 (13%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDS----------ATALIVSLSSPGGSAYAG 83 N+ + + ++G I S L+ R ++R S A + + ++SPGGS Sbjct: 15 NTIQIPVVRLQGAIISSNSLMSRTLSLARCASLLDKAFSYKKAPVVALIINSPGGSPVQS 74 Query: 84 EAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQY 138 IF+ I+ + N K V T V ++AAS GY+I+CA + I A +S+VGSIGV+ F + Sbjct: 75 HLIFQRIRDLANEKNKQVFTFVEDVAASGGYMIACAGDEIFADPSSIVGSIGVVSASFGF 134 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P L K+GV + + K PF V ++ + + F+ LV E R Sbjct: 135 P---ELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKSLQLEVHQTFIDLVKERRT 191 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + G W+G + ++GLID +G V + + G + +R I +PPK Sbjct: 192 SKLSDDSNIFTGMFWSGQKGVELGLIDELGDVRSVIKKRF--GNNAKLRLI---SPPK-- 244 Query: 259 WFCDLKNLSISSLLEDTIPL 278 SLL +PL Sbjct: 245 -----------SLLSSKVPL 253 >gi|296328845|ref|ZP_06871356.1| S49 family protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153966|gb|EFG94773.1| S49 family protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 551 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 19/213 (8%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLD--IPIYISMGDLCASGGYYIATVGKRLFANPVTLTGSIGVVILYPEFTETINKL 402 Query: 149 GVSIKSV---KSSPMKAEPSPFSEVN-PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V+++ K + S SE + K + M +V Y F V E+RNI + Sbjct: 403 KVNMEGFSKGKGFDIFDVSSKLSEESKEKIIYSMNEV----YSEFKEHVMEARNISEEDL 458 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ GR+W G++AK+ GL+D +G + SL Sbjct: 459 EKIAGGRVWLGSQAKENGLVDELGSLNDCINSL 491 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 48/235 (20%), Positives = 104/235 (44%), Gaps = 9/235 (3%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+L K+K + +SL + V F+ + VED ++ ++I + + +++ +E + Sbjct: 27 FILGKLKNK-DKVSLKGVKTVVFNLNELVED--YMISTVSINKTL-SHEAVLKALENLVN 82 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D +I+ + S E + +K+ K +I + Y ++ +N I Sbjct: 83 DKKIEKIIIDVDEVDLSRVHIEELKEIFEKLSVNKEIIA-IGTTFDEYSYQVALLANKIY 141 Query: 123 AAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMM 178 T S + G ++ PY K L LG+++ ++ K FS +++ + + + Sbjct: 142 MLNTKQSCLYFRGYEYKEPYFKNILANLGITVNTLHIGDYKVAGESFSNDKMSEEKKESL 201 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ ++ + F+ LV E R + + D +A ++GLID + EE+ Sbjct: 202 INIKETLFQNFINLVKEKRKVDITNEIFSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|256845156|ref|ZP_05550614.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] gi|256718715|gb|EEU32270.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] Length = 551 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAVINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K++ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLE--VPIYISMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKL 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V+++ FS+++ ++ + + ++ Y F V ++RNI + ++ Sbjct: 403 KVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 GR+W G +AK+ GL+D +G + SL Sbjct: 463 GGRVWLGNKAKENGLVDELGSLNDCIDSL 491 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G ++ PY K L LGV++ ++ K FS +++ + + + ++ ++ + F+ Sbjct: 154 GYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFI 213 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 LV E R + ++ D +A ++GLID + EE+ Sbjct: 214 NLVKEKRKVDITNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|257054169|ref|YP_003132001.1| ClpP class periplasmic serine protease [Saccharomonospora viridis DSM 43017] gi|256584041|gb|ACU95174.1| ClpP class periplasmic serine protease [Saccharomonospora viridis DSM 43017] Length = 300 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 3/206 (1%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +P + +A RG I + + ++R + A+ + ++SPGG+ + I+++ Sbjct: 54 TPQASPLAARGVI-NLASVESALKRAFGHERLKAVALQINSPGGAPTQSGLVAERIRQLA 112 Query: 95 NRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + K PVI ++AAS GY ++CA++ I A TSLVGSIGV+ L++ G+ Sbjct: 113 DDKGVPVIAFAEDVAASGGYWLACAADEIYAHRTSLVGSIGVVTNSFGFARLLERFGIER 172 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S K+ PFS P+ V+ + + + FV V + R ++ L +G + Sbjct: 173 RLYTSGEAKSRLDPFSPEKPEDVEWLNKLHTQLHDLFVEWVKQRRGSRLAESEELFNGDV 232 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLY 238 W G +A ++GL+D +G ++ + Y Sbjct: 233 WLGPKALELGLVDGLGNLRDIVKQRY 258 >gi|88798805|ref|ZP_01114388.1| signal peptide peptidase SppA, 36K type [Reinekea sp. MED297] gi|88778568|gb|EAR09760.1| signal peptide peptidase SppA, 36K type [Reinekea sp. MED297] Length = 327 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 12/220 (5%) Query: 17 LVTLTVVYFSWSSHVEDNSP---HVARIAI-----RGQIEDSQELIERIERISRDDSATA 68 V L V F+ +S +D P H A I + +G + + ++ + R A Sbjct: 55 FVLLGYVMFN-TSATQDIGPTGGHTAVIDVSGVIAQGNLAGADSVVASLRRAVEHSDTRA 113 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGS I+ I +++ + P+ + + + AS Y I+ A+ I A Sbjct: 114 VILRINSPGGSPVQSAYIYNEINRLRQKYEDIPIYSVIVDSGASGAYYIASATQEIYANG 173 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 SLVGSIGV + ++K+G+ + S KA PF EV+P+ + + V++ Sbjct: 174 ASLVGSIGVTAAGFGFQDLIEKVGIERRQFTSGEHKAFLDPFMEVDPEEQALFEAVLNDV 233 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + F+R V R L G WTG++A +GL+D Sbjct: 234 HEQFIRDVQAGRGDRLADNDDLFSGLFWTGSQALDLGLVD 273 >gi|19704208|ref|NP_603770.1| protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714432|gb|AAL95069.1| Protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 494 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 19/213 (8%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E ++E+++ + + L++ ++SPGGSA E I++ Sbjct: 228 IAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 287 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 288 KLKKLD--IPIYISMGDLCASGGYYIATVGKRLFANPVTLTGSIGVVILYPEFTETINKL 345 Query: 149 GVSIKSV---KSSPMKAEPSPFSEVN-PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V+++ K + S SE + K + M +V Y F V E+RNI + Sbjct: 346 KVNMEGFSKGKGFDIFDVSSKLSEESKEKIIYSMNEV----YSEFKEHVMEARNISEEDL 401 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ GR+W G++AK+ GL+D +G + SL Sbjct: 402 EKIAGGRVWLGSQAKENGLVDELGSLNDCINSL 434 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G ++ PY K L LG+++ ++ K FS +++ + + + ++ ++ + F+ Sbjct: 97 GYEYKEPYFKNILANLGITVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFI 156 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 LV E R + + D +A ++GLID + EE+ Sbjct: 157 NLVKEKRKVDITNEIFSGDLIFANSEKAIQLGLIDGLSTYEEI 199 >gi|262375594|ref|ZP_06068827.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] gi|262309848|gb|EEY90978.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] Length = 340 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 6/196 (3%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V IA Q +S I+ +++ + + A++++++SPGGS + I++ IQ +K + Sbjct: 90 VGTIAADKQSVNSSNTIKSLKKAFENKQSKAVVLNINSPGGSPVQSDEIWQEIQYLKKQY 149 Query: 98 P---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P + + + AS Y I+ A++ I+ +SLVGSIGV+ V L KLGV ++ Sbjct: 150 PGKKLYAVIGDTGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYGVTNLLQKLGVEDRT 209 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRI 212 + S KA S V+P +Q V+D+ + F+ V + R + + + S G Sbjct: 210 MTSGENKALLSMTQPVDPAQKAHVQGVLDNVHGHFINAVKQGRGAKLKSNDPAIFS-GLF 268 Query: 213 WTGAEAKKVGLIDVVG 228 WTG +A K+G+ D +G Sbjct: 269 WTGDQAVKLGIADRIG 284 >gi|239947249|ref|ZP_04699002.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921525|gb|EER21549.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] Length = 304 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 6/196 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A+ +S++GSIGV+ ++KLG+ + KA Sbjct: 119 DMAASGGYWLACSGDRIYASYSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKAIL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++D+ Y FV V R + +L +G W G A GL Sbjct: 179 DPFKPINKDDLKIIKDLQKQVYEHFVEYVKTRRVGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVGGQEEVWQSLYA 239 ID +G V + + Sbjct: 239 IDGIGDMYSVMKEKFG 254 >gi|91773876|ref|YP_566568.1| signal peptide peptidase A [Methanococcoides burtonii DSM 6242] gi|91712891|gb|ABE52818.1| signal peptide peptidase, peptidase family S49 [Methanococcoides burtonii DSM 6242] Length = 410 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 12/235 (5%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------EDSQELIERIERISRDDSAT 67 + V+Y S+ + VA I ++G + S+++ + + + DDS Sbjct: 127 SFAVIYMSFGGDIYTTDDKVAVIYVQGFMLTGNLPSGFGYATSEDVCNSLRKATDDDSVK 186 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ ++S GGS A E I I++V++ PV+ + ++AASA Y IS +++IVA + Sbjct: 187 AIVLRVNSGGGSPVAAEEIVTEIKRVQDMGVPVVISMGDVAASAAYYISAPADLIVANPS 246 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + GSIGV+ Y F D+ G+ K K + + + + + +VV Y Sbjct: 247 TTTGSIGVISVYTNRSEFYDEEGIEFYVSKLGSFKDVGGDWRGLTSEEKEYVDNVVLDVY 306 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 F+ V+E+RN+ + ++DGRI+ G EA+K+GL+D +G + + LG Sbjct: 307 DLFITSVAENRNMTKSEVKDIADGRIYIGKEAQKIGLVDELGNFYDAIDAAAELG 361 >gi|294341005|emb|CAZ89400.1| putative Peptidase S49 [Thiomonas sp. 3As] Length = 327 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 15/235 (6%) Query: 11 RYVMLSLVTLTVVYFS-----WSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDD 64 R+V+L +V L ++F + S PH A I + G+I SQ + I +D Sbjct: 49 RFVLLGIVAL--IFFGGMITEFGSRTA-TGPHTALIELNGEISIGSQASADNINAALQDA 105 Query: 65 SAT----ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCAS 118 ++ +I+ ++SPGGS IF I++++ + KPV E+ AS Y ++ A+ Sbjct: 106 FSSPDTRGVILRINSPGGSPVQASQIFAEIERLRAKYNKPVYAVCEEVCASGAYYVAAAA 165 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I SLVGSIGVL +DKLGV+ + + + K PF+ + Sbjct: 166 NDIYVNPASLVGSIGVLMDGFGFSGLMDKLGVTRRLLTAGANKGFMDPFTPMPENQKTYA 225 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +++ + F+ V + R + G +WTG A K GL D G +++ Sbjct: 226 LGMLEQIHKQFIAAVEKGRGVRLKVNDETFSGLVWTGESAVKQGLADGYGDVDQI 280 >gi|330966254|gb|EGH66514.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. actinidiae str. M302091] Length = 332 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 12/227 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-IERIERISRD----DSAT 67 V V + + + S H A I ++G I D + E I RD + Sbjct: 55 VAFLFVAIVLPMLDFEGGASRRSSHTALIDVQGVIADKESASAENITTALRDAFGDEKTK 114 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A Sbjct: 115 GVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIASAADQIYAD 174 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + SLVGSIGV ++KLGV ++ S KA PF Q Q V+D+ Sbjct: 175 KASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQSVLDT 234 Query: 185 SYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ V + R D + S G IWTG +A +GL+D +G Sbjct: 235 THRQFIASVKQGRGDRLKDMDHPEMFS-GLIWTGEQAVALGLVDGLG 280 >gi|58616276|ref|YP_195405.1| periplasmic serine protease (ClpP class) [Azoarcus sp. EbN1] gi|56315737|emb|CAI10381.1| predicted periplasmic serine proteases (ClpP class) [Aromatoleum aromaticum EbN1] Length = 329 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 12/239 (5%) Query: 30 HVEDNSPHVARIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ P +A + I G I + + LI I + A+++ ++SPGG+ E I Sbjct: 74 RFKEREPELAVVRISGTIGELVTADTLIPAIRSAFEAKTTKAVVLQINSPGGAPGDAERI 133 Query: 87 FRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +++++ + P+ + + ASA YLI+ ++ I A SLVGSIG + Sbjct: 134 GSFVREMRLSSEIPIHAVIEGIGASAAYLIAMETDSIYAGRYSLVGSIGAVLSAWEAHQL 193 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD++GV ++ S +K+ +PF+ N + Q +VD F + +R Sbjct: 194 LDRIGVQQRTFSSGELKSMLNPFAPPNEEGNAKAQSLVDEMGEMFREDLMLARAKKLTSG 253 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + G +W G A+++GL+D +G E + QS Y L K++ + P + Y F + Sbjct: 254 IDYGTGEVWNGVVAQEIGLVDEIGTIESI-QSKYGL------EKLRVYRPFRPYSFMRM 305 >gi|307941593|ref|ZP_07656948.1| Na(+)/H(+) antiporter NhaA [Roseibium sp. TrichSKD4] gi|307775201|gb|EFO34407.1| Na(+)/H(+) antiporter NhaA [Roseibium sp. TrichSKD4] Length = 285 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 2/187 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGY 112 +++E+ A A+ + ++SPGGS I++ I+ + K+ K V+ V ++AAS GY Sbjct: 46 QQLEKAFSMKKAPAVALVINSPGGSPVQSRLIYKRIRDLAEKHEKEVLVFVEDVAASGGY 105 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +I+ A + I+A +S+VGSIGV+ +K ++KLGV + + K PF + P Sbjct: 106 MIAVAGDEIIADPSSIVGSIGVVSAGFGMKGLIEKLGVERRVYTAGENKVTLDPFQDEKP 165 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ ++ + + F+ +V R+ L G+ W G A+ +GL+D +G Sbjct: 166 EDIEHLKSLQLEIHETFIDMVKARRSDVLSDNPDLFTGKFWAGKTARDLGLVDALGDVRS 225 Query: 233 VWQSLYA 239 +S + Sbjct: 226 TLKSRFG 232 >gi|13476173|ref|NP_107743.1| proteinase [Mesorhizobium loti MAFF303099] gi|14026933|dbj|BAB53529.1| probable proteinase [Mesorhizobium loti MAFF303099] Length = 286 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 10/180 (5%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV---KNRKPVITEVHEMAASAGYLISCASNIIV 122 A A+ +S++SPGGS IFR I+ + KN+K V+ V ++AAS GY+I+ A + I Sbjct: 56 APAVAISINSPGGSPVQSRLIFRRIRDLAAEKNKK-VLVFVEDVAASGGYMIAVAGDEIF 114 Query: 123 AAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 A +S+VGSIGV+ F +P + + K+GV + + KA PF + V+ ++ Sbjct: 115 ADPSSIVGSIGVVSASFGFPEL---MKKIGVERRVHTAGQNKAVLDPFKPEKKEDVERLK 171 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ LV E R L G WTG + ++GL+D +G V ++ + Sbjct: 172 ALQLEVHETFIDLVKERRGTKLKDDPDLFTGLFWTGKKGLELGLVDALGDMRTVLKTRFG 231 >gi|219852684|ref|YP_002467116.1| signal peptide peptidase SppA, 36K type [Methanosphaerula palustris E1-9c] gi|219546943|gb|ACL17393.1| signal peptide peptidase SppA, 36K type [Methanosphaerula palustris E1-9c] Length = 265 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 4/178 (2%) Query: 52 ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 E+I R + DD T A+++ ++SPGG+ A E I I+ K +KPV+ + ++A SA Sbjct: 73 EVIGNALRAAADDPMTDAIVLRVNSPGGTPSAAEEIIGDIEYAKTKKPVVVSMGDIATSA 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 YLIS ++ I A + +IG ++ + ++ K G ++ VKS MK S + Sbjct: 133 AYLISVHADRIYANPDTFTANIGTIWTFSNDSEWMKKKGYQVEVVKSGEMKDMGSSSRSL 192 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + Q +V++S+ F+ V R P ++T + DGR+ G EA +GL+D +G Sbjct: 193 TTEERDYAQQLVNASFESFISDVLSHR--PVNRT-AIEDGRVIRGQEALDLGLVDKLG 247 >gi|325981472|ref|YP_004293874.1| peptidase S49 [Nitrosomonas sp. AL212] gi|325530991|gb|ADZ25712.1| peptidase S49 [Nitrosomonas sp. AL212] Length = 314 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 8/209 (3%) Query: 37 HVARIAIRGQIE-DSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I +RG I DS ++I R D + +I+ ++SPGGS I I+ Sbjct: 67 HTALIDLRGTITADSMNSADKINSSLRSAFQDKNTKGVILRINSPGGSPVQAGYINDEIR 126 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + P I V ++ AS GY I+ A++ I + SL+GSIGVL L+KL Sbjct: 127 RLRAKYPDIPLYAIVGDICASGGYYIAVAADKIYVDKASLIGSIGVLMDSFGFTGTLEKL 186 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + + + K+ PFS ++P + ++ + F+++V + R + Sbjct: 187 GIERRLLTAGENKSFLDPFSPLDPVQIDHATKLLREVHEQFIQVVKQGRGERLKNDPDIF 246 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G IWTG ++ +GL D +G E V + + Sbjct: 247 SGIIWTGQKSIDLGLTDAIGNAEYVAREI 275 >gi|226356235|ref|YP_002785975.1| peptidase S49 [Deinococcus deserti VCD115] gi|226318225|gb|ACO46221.1| putative peptidase S49, Signal peptide peptidase (SPPase) [Deinococcus deserti VCD115] Length = 533 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 7/186 (3%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + S ++ ++R D A++V ++S GGSA A + ++R I + KPV+ + Sbjct: 287 GPMAGSDTVVAALKRAKEDKKTKAIVVYVNSGGGSALASDLMWREI--ATSEKPVVVVMG 344 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV--KSSPMKA 162 E AAS GY ++ + IVA+ +L GSIGV+ P ++ F + G+ + V + + M + Sbjct: 345 EYAASGGYYLATHARHIVASPYTLTGSIGVVSGKPIMREFNARHGLKPERVGRERALMHS 404 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P++ + Q ++ + Y F+ V+E R + ++ + GRIW G +A ++G Sbjct: 405 ASQPYTV---EERQHVERAIAEVYDRFITRVAEGRKLSKERVNEIGRGRIWAGQDALELG 461 Query: 223 LIDVVG 228 L+D +G Sbjct: 462 LVDELG 467 >gi|56698460|ref|YP_168834.1| S49 family peptidase [Ruegeria pomeroyi DSS-3] gi|56680197|gb|AAV96863.1| peptidase, family S49 [Ruegeria pomeroyi DSS-3] Length = 281 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 3/189 (1%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKP 98 +A RG + D+ L +ER R A+ + ++SPGGS I I+++ +++ P Sbjct: 41 LAGRGALNDTT-LAPMLERAFRKGKPAAVALEINSPGGSPVQSSLIGARIRRLAAEHKVP 99 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V V ++AAS GY ++CA++ I A ++S++GSIGV+ FL + G + + Sbjct: 100 VYAFVEDVAASGGYWLACAADEIWADDSSVLGSIGVISASFGAHVFLARQGFERRVHTAG 159 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ PFS + V ++ ++ + F+ V E R D T L G +W GA A Sbjct: 160 KSKSMLDPFSPEKKEDVTRLKGLLGDIHQNFISHVKERRGDRLDATEDLFTGEVWLGARA 219 Query: 219 KKVGLIDVV 227 + +GLID + Sbjct: 220 RDLGLIDGI 228 >gi|323144007|ref|ZP_08078659.1| signal peptide peptidase SppA, 67K type [Succinatimonas hippei YIT 12066] gi|322416210|gb|EFY06892.1| signal peptide peptidase SppA, 67K type [Succinatimonas hippei YIT 12066] Length = 643 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 98/181 (54%), Gaps = 2/181 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLIS 115 + + DD A+++ ++SPGG+ A E I R + ++K K VI ++ AAS GY ++ Sbjct: 389 LNEVRNDDKIKAVVMYINSPGGAVKASEEIRRELMRLKELGKKVIVSMNGTAASGGYWVA 448 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I+A ++L GSIGV L+ +GV V + A+ S + ++ Sbjct: 449 SAADQIIADSSTLTGSIGVFSLALGAHDLLNHVGVYQDGVATHEF-ADASIANPLSENTK 507 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + M+ V+ +Y F+ LV++SR + + ++G+++ G EA+ +GLID +G + Sbjct: 508 ETMRLSVEHTYDTFINLVAKSRRLSPANYISYAEGQVFLGDEAQNLGLIDDLGSLNDALN 567 Query: 236 S 236 + Sbjct: 568 T 568 >gi|119897908|ref|YP_933121.1| peptidase [Azoarcus sp. BH72] gi|119670321|emb|CAL94234.1| conserved hypothetical peptidase [Azoarcus sp. BH72] Length = 303 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 20/261 (7%) Query: 12 YVMLSLVTLTVVYF---SWSSHVEDNSP---HVARIAIRGQIEDSQEL-IERI---ERIS 61 + +L+ + L V+ + W E +P + A +++ G I+ E ER+ R + Sbjct: 23 FRLLTFIYLGVILWKVADWGEPAEALAPAGGYTAMVSVEGVIDSGSEASAERVIGALRSA 82 Query: 62 RDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCA 117 DD A +++ ++SPGGS I I +++ +P V+ V +M AS GY ++ A Sbjct: 83 YDDKAVRGVVLRINSPGGSPVQAGMINDEIYRLRGERPDLPVVAVVEDMCASGGYYVAAA 142 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I+ + SLVGSIGVL ++KLGV + + + K PFS Sbjct: 143 ADKIMVDKASLVGSIGVLMDGFGFVGAMEKLGVERRLLAAGANKGFLDPFSPQRETQTAH 202 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++D + F+ +V + R + L G +WTGA + ++GL D G + V + + Sbjct: 203 ARGLLDDIHRQFIDVVRKGRGPRLKEGPELFSGLVWTGARSVELGLADGYGTVDSVARDV 262 Query: 238 YALGVDQSIRKIKDWNPPKNY 258 + +++D+ +++ Sbjct: 263 F------QAEEVRDFTETRSF 277 >gi|320538294|ref|ZP_08038179.1| signal peptide peptidase SppA [Treponema phagedenis F0421] gi|320144870|gb|EFW36601.1| signal peptide peptidase SppA [Treponema phagedenis F0421] Length = 603 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 21/221 (9%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIED----------SQELIERIERISRDDSATALIVSL 73 Y + SH E ++ + I ++G I S +++ + D A+++ + Sbjct: 306 YNFYYSHSE-STNKIGIIYLKGAISSYGTRQNDAVTSGYMLDLFDLAVNDPDVKAIVLRI 364 Query: 74 SSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 S GG +A E I RA+++ V+ +KPV+ + +AAS Y I+ +++ I A+ ++ GS Sbjct: 365 DSGGGEVFASEEIRRAVERCIVRAKKPVVVSMGAVAASGAYWIASSADYIFASPYTITGS 424 Query: 132 IGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKA---VQMMQDVVDSSYH 187 IGVL P + L K LG+++ V + P++ V + ++Q + S Y Sbjct: 425 IGVLAVMPTFEAALQKYLGITVDGVYLHKFR----PYTGVKNMSETDKSLLQFEIMSIYK 480 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ VS R + +DK ++ G++++GA AK +GL+D +G Sbjct: 481 NFITKVSTGRKLSFDKVSDIAGGKVYSGATAKNLGLVDELG 521 >gi|291614214|ref|YP_003524371.1| peptidase S49 [Sideroxydans lithotrophicus ES-1] gi|291584326|gb|ADE11984.1| peptidase S49 [Sideroxydans lithotrophicus ES-1] Length = 317 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 11/219 (5%) Query: 26 SWSSHVEDNS---PHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPG 77 WS D S H A I + G I ++ LI ++ +D + +I+ ++SPG Sbjct: 51 GWSGDKVDGSLSGKHTALIDLTGVISSDSNANADNLIGSLQDAFKDKNTVGVILRINSPG 110 Query: 78 GSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GS + I++ + P I V +M AS GY I+ A++ I + S+VGSIGV Sbjct: 111 GSPVQAGLVNDEIRRQRKLHPDIPLYVVVEDMCASGGYYIAAAADKIYVNKASIVGSIGV 170 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 L + KLGV + + K PFS +NPK + +++ + F+ +V Sbjct: 171 LMDGFGFTGTMQKLGVERRLFTAGENKGFMDPFSPLNPKHEAFTRKMLEDIHMQFIDVVK 230 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + R +T G WTG +A ++GL D G + V Sbjct: 231 QGRGKRLKETPETFSGLFWTGDKAIEMGLADEYGSVDSV 269 >gi|94984761|ref|YP_604125.1| peptidase S49 [Deinococcus geothermalis DSM 11300] gi|94555042|gb|ABF44956.1| peptidase S49 [Deinococcus geothermalis DSM 11300] Length = 536 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 7/181 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S ++ ++ +DD A+++ ++S GGSA A + I+R + + KPV+ + E AAS Sbjct: 295 SDTVVAALKHAKKDDKTKAIVLYVNSGGGSALASDLIWREV--ATSEKPVVAVMGEYAAS 352 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPF 167 GY + + IVA+ +L GSIGV+ P ++ F + G+ + V S + M + PF Sbjct: 353 GGYYVLTHARHIVASPYTLTGSIGVVSGKPVLQEFNARHGLKPEPVGSERALMYSAARPF 412 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 S+ V+ + Y FV V+E R + ++ + GRIW+G +A +GL+D + Sbjct: 413 SDEERAHVEQG---IAEVYDRFVNRVAEGRGMTPERVNEIGRGRIWSGLDALDLGLVDEL 469 Query: 228 G 228 G Sbjct: 470 G 470 >gi|254303887|ref|ZP_04971245.1| S49 family protease IV [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324079|gb|EDK89329.1| S49 family protease IV [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 551 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 19/213 (8%) Query: 38 VARIAIRGQIE--DSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G+I+ +S+E +IE+++ + + L++ ++SPGGSA E I++ Sbjct: 285 IAIINLEGEIDTRESKEANINYDNVIEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQ 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ YP ++KL Sbjct: 345 KLKKLD--IPIYISMGDLCASGGYYIATVGKKLFANSVTLTGSIGVVVLYPEFTEAINKL 402 Query: 149 GVSIKSV---KSSPMKAEPSPFS-EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V+++ K + S S E K + M +V Y+ F V ++RNI + Sbjct: 403 KVNMEGFSKGKGFDIFDVTSKLSKESKEKIIYSMNEV----YNEFKEHVMKARNISEEDL 458 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ GR+W G++AK GL+D +G + SL Sbjct: 459 EKIAGGRVWLGSQAKANGLVDELGSLNDCIDSL 491 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 8/223 (3%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 +SL + V F+ + VED ++ ++I + + +++ +E + D +I+ + Sbjct: 38 VSLKGIKTVVFNLNELVED--YMISTVSINKTL-SHEAVLKALENLVNDKKIEKIIIDVD 94 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET--SLVGSI 132 S E I +K+ K +I + Y ++ +N I T S + Sbjct: 95 EVDLSRVHIEEIKEIFEKLSVNKEIIA-IGTTFDEYSYQVALLANKIYMLNTKQSSLYFR 153 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G ++ PY K L LGV++ ++ K FS +++ + + + ++ ++ + F+ Sbjct: 154 GYEYKEPYFKNILTNLGVTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFI 213 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 LV E R + ++ D +A ++GLID + EE+ Sbjct: 214 NLVKEKRKVDITNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|91205146|ref|YP_537501.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157827519|ref|YP_001496583.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] gi|91068690|gb|ABE04412.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157802823|gb|ABV79546.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] Length = 304 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 6/185 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +++ + + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRTLAKEHKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++CA + I A +S++GSIGV+ ++KLG+ + KA Sbjct: 119 DMAASGGYWLACAGDQIYALHSSIIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKAVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGL 223 PF +N + V++++D+ Y FV V R + +L +G W G A GL Sbjct: 179 DPFKPINKEDVKIIKDLQKQVYEHFVDYVKTRRVGKLTQQDDILFNGEFWAGRTALDYGL 238 Query: 224 IDVVG 228 ID +G Sbjct: 239 IDDLG 243 >gi|313847682|emb|CBY16670.1| putative exported protease [Chlamydophila psittaci RD1] Length = 335 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 15/212 (7%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ-- 91 +S H A+I Q+ I ++ D +I+ + PGG + ++ IQ Sbjct: 77 SSKHTAKII--------QDAITTLDSAPYKDRVKGIIIDMDCPGGEVFEISRVYSIIQFW 128 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLG 149 K + + PV V+ + AS GY ++CA++ I + +SL+GS+GVL PY VK L + G Sbjct: 129 KQRTQCPVYVFVNGLCASGGYYVACAADKIYSTSSSLIGSVGVL-SGPYFNVKEGLSRYG 187 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 V + + KA +P++E K ++ Q+++D Y FV +V +R + DK + + Sbjct: 188 VQSDLLIAGKDKAPMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPRLTKDKLVSVL 247 Query: 209 DGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYA 239 R+++ +A + G IDV +++V Q L A Sbjct: 248 GARLYSPEKALEEGYIDVANVTKQQVLQDLVA 279 >gi|38638590|ref|NP_943176.1| peptidase [Pseudomonas sp. ND6] gi|34335378|gb|AAP44276.1| probable peptidase [Pseudomonas sp. ND6] Length = 258 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 119/232 (51%), Gaps = 10/232 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +HV+ VAR+ G+ ++ L + + ++ A+I+ ++SPGGS ++ Sbjct: 3 NHVKLRIEAVARLG-DGEEASAENLKRSLGKAFESENTKAVILEINSPGGSPVQAGHVYD 61 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPF 144 +++++ P V + ++ AS GY I+ A++ I A + SLVGSIGV + YV+ Sbjct: 62 EVRRLRALHPDTKVYAVITDLGASGGYYIASAADEIFADKASLVGSIGVTAASFGYVE-L 120 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 + KLGV +S S KA F N + + + V+ ++++ F+R V R + Sbjct: 121 MQKLGVERRSYTSGEHKAFLDQFQPQNQEETKFWEGVLKTTHNQFIRSVEAGRGERLKAK 180 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + L G IWTG +A +GL+D +G + V + + +GV + + + NP Sbjct: 181 ENPDLYSGLIWTGEQAVGLGLVDRLGDSDYVAREV--VGVSKIVDFTRKQNP 230 >gi|329942445|ref|ZP_08291255.1| peptidase S49 family protein [Chlamydophila psittaci Cal10] gi|332287086|ref|YP_004421987.1| putative exported protease [Chlamydophila psittaci 6BC] gi|325506439|gb|ADZ18077.1| putative exported protease [Chlamydophila psittaci 6BC] gi|328815355|gb|EGF85343.1| peptidase S49 family protein [Chlamydophila psittaci Cal10] gi|328914320|gb|AEB55153.1| peptidase, U7 family protein, putative [Chlamydophila psittaci 6BC] Length = 333 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 15/212 (7%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ-- 91 +S H A+I Q+ I ++ D +I+ + PGG + ++ IQ Sbjct: 75 SSKHTAKII--------QDAITTLDSAPYKDRVKGIIIDMDCPGGEVFEISRVYSIIQFW 126 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLG 149 K + + PV V+ + AS GY ++CA++ I + +SL+GS+GVL PY VK L + G Sbjct: 127 KQRTQCPVYVFVNGLCASGGYYVACAADKIYSTSSSLIGSVGVL-SGPYFNVKEGLSRYG 185 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 V + + KA +P++E K ++ Q+++D Y FV +V +R + DK + + Sbjct: 186 VQSDLLIAGKDKAPMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPRLTKDKLVSVL 245 Query: 209 DGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYA 239 R+++ +A + G IDV +++V Q L A Sbjct: 246 GARLYSPEKALEEGYIDVANVTKQQVLQDLVA 277 >gi|73541958|ref|YP_296478.1| peptidase S49 [Ralstonia eutropha JMP134] gi|72119371|gb|AAZ61634.1| Peptidase S49 [Ralstonia eutropha JMP134] Length = 394 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 14/244 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNS----PHVARIAIRGQIE-----DSQELIERI 57 +I R+ +L + L VV+F+ D+ H A +++ G+I ++ + + Sbjct: 109 RIFFRFAVLGI--LLVVFFAVFDFKGDSGIGSGRHTAMVSLDGEIAAGTPASAESINASL 166 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLI 114 + D +A +I+ ++SPGGS I I +++ KP V E+ AS GY + Sbjct: 167 QAAFADSNAAGVILKINSPGGSPVQAGIINDEIHRLRTLYPSKPFYVVVEEICASGGYYV 226 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I + S+VGSIGVL +DKLGV + S K PFS P+ Sbjct: 227 AAAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPRQ 286 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++ + F+ +V E R L G W+G + ++GL D +G + V Sbjct: 287 KAYAETMLKEIHQQFIDVVKEGRGDRLKSDPELFSGLFWSGERSVELGLADGLGSADYVA 346 Query: 235 QSLY 238 + L+ Sbjct: 347 RDLF 350 >gi|90021269|ref|YP_527096.1| putative peptidase [Saccharophagus degradans 2-40] gi|89950869|gb|ABD80884.1| peptidase S49 [Saccharophagus degradans 2-40] Length = 329 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 9/242 (3%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISR 62 V K + Y+ + L+ L V S V H A + +RG I D + RI R Sbjct: 44 VFKTLTFAYLFVVLM-LFVAGAQQSGVVNVTEDHTAVVMVRGAIAGDKEASAPRINAALR 102 Query: 63 ----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 ++ A A++++++SPGGS ++ I ++K P V + ++ AS Y IS Sbjct: 103 AAFENEHAKAIVLAVNSPGGSPVQSAYVYDEIMRLKKEYPDKKVYAVIEDIGASGAYYIS 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A +SLVGSIGV+ ++KLGV + S KA PFS N + Sbjct: 163 AAADEIYANRSSLVGSIGVIASGFGFTGTMEKLGVERRVYTSGENKAFLDPFSPANEQHE 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + V+ + F+ V R + G IW G A ++GLID +G +V + Sbjct: 223 EFWEGVLAEVHVQFMDAVKAGRGDRLKDNDTVFSGLIWNGERALEMGLIDGLGSARDVAR 282 Query: 236 SL 237 + Sbjct: 283 DV 284 >gi|325109492|ref|YP_004270560.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] gi|324969760|gb|ADY60538.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] Length = 358 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 4/210 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++ +I+ I + + DD +V + SPGG I+ ++K+ +KPV ++ +AAS Sbjct: 103 TERIIDHIRKATEDDDVKGAVVVVDSPGGLVADSHQIYHELKKLAEKKPVFVQMKRIAAS 162 Query: 110 AGYLISCA---SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 GY ++ S IVA T+ GSIGV+ + + ++GV + + + K S Sbjct: 163 GGYYVAMGAGKSGKIVAEPTTWTGSIGVIIPHYDLTELAGQIGVKSEPLTTGEFKDSLSS 222 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F ++ + + + ++D +Y F+ ++ + R ++ + ++ GRI+T +A GL+D Sbjct: 223 FKPLSDRERDVWKGILDDAYQRFLSVIEQGRPDMSRQQIEDVATGRIFTSQQALAEGLVD 282 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 +G +E L +S R I+ +PP Sbjct: 283 EIGFLDETIAGLAEQLNLKSYRVIEYQHPP 312 >gi|325914610|ref|ZP_08176951.1| ClpP class periplasmic serine protease [Xanthomonas vesicatoria ATCC 35937] gi|325539112|gb|EGD10767.1| ClpP class periplasmic serine protease [Xanthomonas vesicatoria ATCC 35937] Length = 331 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 7/214 (3%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAY 81 W + + VA I I G I + + +I IE+ R + T +++ + SPGGS Sbjct: 74 WGLNADPVRDSVALITINGGIGEMGKASATSVIPLIEQACRAERVTEVVLLIDSPGGSPT 133 Query: 82 AGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I A++ K ++PVI+ + M ASA Y+I+ ++ I A+ SLVGSIG + +Y Sbjct: 134 DADRIVSALKICKAAKRPVISVIGSMGASAAYMIAMHTDRIYASRYSLVGSIGAITRYVD 193 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +LG+ + KS +K PS S +P+ ++M ++V F + +R Sbjct: 194 ASGLAQRLGLVEQVYKSGQLKGGPSTLSGSSPEDSKLMAELVVQVASEFYGQLQAARGPR 253 Query: 201 YDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + L GRIWT +A +GL+D + E++ Sbjct: 254 LKGSREDLMSGRIWTAQDAVALGLVDEIAVLEDL 287 >gi|237750827|ref|ZP_04581307.1| signal peptide protease IV [Helicobacter bilis ATCC 43879] gi|229373272|gb|EEO23663.1| signal peptide protease IV [Helicobacter bilis ATCC 43879] Length = 294 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 3/222 (1%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 ++ P++A++ + I +S+ +IE I ++D +++ + SPGG+ A I I++ Sbjct: 44 ESKPNLAKLYLNFPIYESESFAAQIEAIKKNDDIKGVLLLIDSPGGAVGASIEIADMIKE 103 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + + PV+ + AS Y ++ I A +L+GSIGV+F P + +DK+G+ + Sbjct: 104 LNEKIPVVAYTQSLMASGSYYAGMYAHSIYANRGALIGSIGVIFSAPNFEEAMDKIGIKM 163 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDG 210 + V + K S + + + ++ Y F V +R + L ++G Sbjct: 164 QGVSAGEYKEIGSITRKWKNTEKEFINNLTQEQYKMFYTDVIAARGERLKTKNHLDFAEG 223 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKD 251 +I++ + A K+GLID V +V + L L GV++ + KD Sbjct: 224 KIFSASNALKLGLIDGVNSMSKVEKILQNLSGVEEIVWLKKD 265 >gi|149376748|ref|ZP_01894506.1| putative peptidase [Marinobacter algicola DG893] gi|149358987|gb|EDM47453.1| putative peptidase [Marinobacter algicola DG893] Length = 346 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 10/227 (4%) Query: 17 LVTLTVVYFSWSSHVED--NSPHVARIAIRG-----QIEDSQELIERIERISRDDSATAL 69 L ++ F S +E H A + I G ++ + ++ + +++ + Sbjct: 73 FALLLMIQFPLSGALESAAKGKHTALVEIEGTIAADELASADNIVGSLREAFEAENSVGV 132 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAET 126 I+ ++SPGGS ++ I +++ P V + ++ AS Y I+ A++ I A + Sbjct: 133 ILRINSPGGSPVQSGYVYDEIVRLRGEYPEKKVYAVISDIGASGAYYIAAAADEIYADKA 192 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 SLVGSIGV+ +DKLGV + + KA PFS + V+ QDV+++++ Sbjct: 193 SLVGSIGVVAGGFGFTGIMDKLGVDRRLYTAGENKAFLDPFSPEEEEEVKFWQDVLETTH 252 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F+ V + R L G +W+G +A ++GLID +G V Sbjct: 253 SQFIESVRKGRGDRLADDEQLFSGLVWSGEQALELGLIDGLGSSSHV 299 >gi|270159568|ref|ZP_06188224.1| putative peptidase [Legionella longbeachae D-4968] gi|289165636|ref|YP_003455774.1| signal peptide peptidase [Legionella longbeachae NSW150] gi|269987907|gb|EEZ94162.1| putative peptidase [Legionella longbeachae D-4968] gi|288858809|emb|CBJ12723.1| signal peptide peptidase [Legionella longbeachae NSW150] Length = 318 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 21/280 (7%) Query: 11 RYVMLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIED-----SQELIERIERISR 62 R + L ++ V FS S++ E + PHV + I G++ D S + + ++ + Sbjct: 39 RVIYLLIIAYIVYQFSASTNEEGGTNTKPHVGIVDINGEMADAKPANSDDFAKGLDAAYK 98 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA----GYLISCAS 118 + ALIV ++SPGGS E ++ I+ + + P I +++ + A Y ++ A+ Sbjct: 99 NSGLKALIVRINSPGGSPVQAEYMYNTIKYYQKKHPDI-KIYSVCVDACASAAYYVAVAT 157 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I A+ S+VGSIGVL+ V ++K+GVS + S K PFS Q + Sbjct: 158 DAIYASPASMVGSIGVLYNGFGVVDLMNKIGVSRRLQTSGVNKGFLDPFSPQTDFEKQKL 217 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q ++D + F+ V E R G WTG +A +GLID ++ + + Sbjct: 218 QTMLDIVHQQFINRVKEGRGSRLHIDDETFSGLFWTGEQALTMGLIDGYASSGQLAREII 277 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 ++ ++ D+ +N + KN I + + D +PL Sbjct: 278 ------NVPEVIDYTHKQNLFDRVTKN--IGTAMADELPL 309 >gi|73668088|ref|YP_304103.1| signal peptide peptidase A [Methanosarcina barkeri str. Fusaro] gi|72395250|gb|AAZ69523.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Methanosarcina barkeri str. Fusaro] Length = 394 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 18/234 (7%) Query: 13 VMLSLVTL---TVVYFSWSSHVEDN---SPHVARIAIRGQI-----------EDSQELIE 55 V+L+L+T+ ++V S + V N S VA I I+G I S+ + Sbjct: 99 VLLALITIILVSLVLISSNFGVGGNLGSSEKVAVIYIQGTIFSGNVAEGLGYATSEAIAG 158 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLI 114 I R + DD A+++ + S GGS A + I I+K + + PV+ + ++AASA Y I Sbjct: 159 DIRRAAADDGVKAIVLRIDSSGGSPAAAQEIVEEIKKAQAKGIPVVVSMGDLAASAAYYI 218 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S ++ I+A ++ GSIGV++ + ++ GV KS MK S + + + Sbjct: 219 SAPTDYIIANPSTNTGSIGVIWVFQNNSLSNEETGVDYYVAKSGEMKDMGSTWRGLTDQE 278 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + VV SY FV VSE RN+ + L+DGRI+TG AK++GL+D G Sbjct: 279 KEYADSVVMDSYENFVTEVSEGRNMSRGEVKALADGRIYTGTRAKELGLVDGFG 332 >gi|254703750|ref|ZP_05165578.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella suis bv. 3 str. 686] gi|256031039|ref|ZP_05444653.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella pinnipedialis M292/94/1] gi|256060533|ref|ZP_05450701.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella neotomae 5K33] gi|256254442|ref|ZP_05459978.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella ceti B1/94] Length = 299 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 58 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 117 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 118 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 174 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 175 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 234 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + + S Sbjct: 235 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMDS 268 >gi|50085707|ref|YP_047217.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. ADP1] gi|11345441|gb|AAG34712.1|AF320001_5 putative protease [Acinetobacter sp. BD413] gi|49531683|emb|CAG69395.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. ADP1] Length = 338 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 12/212 (5%) Query: 37 HVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 H+A + I G I+ +S++ + +ER ++ A+ ++++SPGGS + I++ I Sbjct: 81 HLAVVNIIGTIDSSNQSVNSEDTNKALERAFEAKNSKAVALNINSPGGSPVQSDEIWQEI 140 Query: 91 QKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ + K Sbjct: 141 RYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQK 200 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTL 205 LG+ +++ S K S VNP + +Q V+D+ + F+ V E R + + Sbjct: 201 LGIEDRTLTSGSNKDILSMTKPVNPAQREHIQSVLDNVHAHFINAVKEGRGTRLKSNDPA 260 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + S G WTG +A ++G+ D G + + + L Sbjct: 261 IFS-GLFWTGEQAIQLGVADRTGNLDTLMREL 291 >gi|296113528|ref|YP_003627466.1| signal peptide peptidase SppA [Moraxella catarrhalis RH4] gi|295921222|gb|ADG61573.1| signal peptide peptidase SppA [Moraxella catarrhalis RH4] gi|326559531|gb|EGE09945.1| signal peptide peptidase SppA [Moraxella catarrhalis 7169] gi|326562731|gb|EGE13033.1| signal peptide peptidase SppA [Moraxella catarrhalis 103P14B1] gi|326567786|gb|EGE17892.1| signal peptide peptidase SppA [Moraxella catarrhalis BC1] gi|326568577|gb|EGE18648.1| signal peptide peptidase SppA [Moraxella catarrhalis BC7] gi|326568702|gb|EGE18772.1| signal peptide peptidase SppA [Moraxella catarrhalis BC8] gi|326572571|gb|EGE22560.1| signal peptide peptidase SppA [Moraxella catarrhalis CO72] gi|326574167|gb|EGE24115.1| signal peptide peptidase SppA [Moraxella catarrhalis 101P30B1] Length = 342 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 125/252 (49%), Gaps = 13/252 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIER 56 LK + +++ ++ L + S E N PH+A I + G I ++Q + + Sbjct: 53 LKLLTFAFLVFFIIVLGFGCSGFGSSFERIGINEPHIAIIDVNGAIMTNGDVNAQNINDS 112 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYL 113 + ++ A A++++++SPGGS + I++ ++ P + + ++ AS Y Sbjct: 113 LMEAFENNQAKAVVLNINSPGGSPVQSDEIWQMAMMLRQEYPDKKLYAIIGDLGASGAYY 172 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I +SLVGSIGV+ ++ + K+GV +++ + K S E+ Sbjct: 173 IASAADEIWVNPSSLVGSIGVIMSGYNLEELMKKVGVKDRTITAGEYKDILSSSREMTET 232 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 Q +Q +++ ++ F++ V + R + + L G IWTG +A ++GL D GG Sbjct: 233 ERQHIQALLNKTHQNFIKAVKQGRGSKLKNPEQNQLFSGLIWTGTDAVELGLADKTGGIS 292 Query: 232 EVWQSLYALGVD 243 ++ ++L VD Sbjct: 293 QLKKTLDLQTVD 304 >gi|213969775|ref|ZP_03397910.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato T1] gi|301382851|ref|ZP_07231269.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato Max13] gi|302062843|ref|ZP_07254384.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato K40] gi|302131351|ref|ZP_07257341.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925583|gb|EEB59143.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato T1] Length = 332 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 12/227 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-IERIERISRD----DSAT 67 V V + + + S H A I ++G I D + E I RD + Sbjct: 55 VAFLFVAIVLPMLDFEGGASRRSSHTALIDVQGVIADKESASAENITTALRDAFGDEKTK 114 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A Sbjct: 115 GVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIASAADQIYAD 174 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + SLVGSIGV ++KLGV ++ S KA PF Q Q V+D+ Sbjct: 175 KASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQSVLDT 234 Query: 185 SYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ V + R D + S G +WTG +A +GL+D +G Sbjct: 235 THRQFIASVKQGRGDRLKDKDHPEMFS-GLVWTGEQAVALGLVDGLG 280 >gi|326564633|gb|EGE14851.1| signal peptide peptidase SppA [Moraxella catarrhalis 46P47B1] gi|326565450|gb|EGE15621.1| signal peptide peptidase SppA [Moraxella catarrhalis 12P80B1] gi|326575606|gb|EGE25530.1| signal peptide peptidase SppA [Moraxella catarrhalis O35E] Length = 342 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 125/252 (49%), Gaps = 13/252 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIER 56 LK + +++ ++ L + S E N PH+A I + G I ++Q + + Sbjct: 53 LKLLTFAFLVFFIIVLGFGCSGFGSSFERIGINEPHIAIIDVNGAIMTNGDVNAQNINDS 112 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYL 113 + ++ A A++++++SPGGS + I++ ++ P + + ++ AS Y Sbjct: 113 LMEAFENNQAKAVVLNINSPGGSPVQSDEIWQMAMMLRQEYPDKKLYAIIGDLGASGAYY 172 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I +SLVGSIGV+ ++ + K+GV +++ + K S E+ Sbjct: 173 IASAADEIWVNPSSLVGSIGVIMSGYNLEELMKKVGVKDRTITAGEYKDILSSSREMTET 232 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 Q +Q +++ ++ F++ V + R + + L G IWTG +A ++GL D GG Sbjct: 233 ERQHIQALLNKTHQNFIKAVKQGRGSKLKNPEQNQLFSGLIWTGTDAVELGLADKTGGIS 292 Query: 232 EVWQSLYALGVD 243 ++ ++L VD Sbjct: 293 QLKKTLDLQTVD 304 >gi|94499597|ref|ZP_01306134.1| Periplasmic serine protease (ClpP class) [Oceanobacter sp. RED65] gi|94428351|gb|EAT13324.1| Periplasmic serine protease (ClpP class) [Oceanobacter sp. RED65] Length = 322 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYA 82 SS + + A + +RG I D +E ++ + + A A+I+ ++SPGGS Sbjct: 61 SSKLAASGKFTALVEVRGVIADGEEASADIIVTGLRNAFEAEGAQAVILRINSPGGSPVQ 120 Query: 83 GEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 ++ I ++K ++KPV + ++ AS Y ++ A++ I A + SLVGSIGV+ + Sbjct: 121 SGYVYDEIMRLKELHQKPVYAVISDLGASGAYYMAAAADEIYADKASLVGSIGVVGSGFG 180 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V +DKLGV + + KA PFS ++ K Q + V+ +++ F+ V + R Sbjct: 181 FVDA-MDKLGVERRLFTAGEHKAFLDPFSPLDKKEEQFWEQVLSTTHDQFIEQVKKGRGD 239 Query: 200 PYDKTLVLSDGRIWTGAEA 218 L G +WTG +A Sbjct: 240 RLVDNDKLFSGLVWTGEQA 258 >gi|254718576|ref|ZP_05180387.1| Clp protease [Brucella sp. 83/13] gi|265983552|ref|ZP_06096287.1| peptidase S49 [Brucella sp. 83/13] gi|264662144|gb|EEZ32405.1| peptidase S49 [Brucella sp. 83/13] Length = 290 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 49 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 166 AEDIKRLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 225 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + ++S Sbjct: 226 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMNS 259 >gi|146329644|ref|YP_001209888.1| SspA family peptidase [Dichelobacter nodosus VCS1703A] gi|146233114|gb|ABQ14092.1| peptidase SspA family [Dichelobacter nodosus VCS1703A] Length = 323 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 25/274 (9%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVED-------NSPHVARIAIRGQI-----EDSQELI 54 KI R++ + L V+Y + + +E + PHVA I I G I +++++ Sbjct: 33 KIIFRFI---FIGLAVLYLAVMTQIEQKNKVKTVHEPHVALIHISGVIGAQEQSNARDIN 89 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGY 112 E ++ +D A++++++SPGGS I+R I ++K N+ PV + +M AS Y Sbjct: 90 EVLKNAFTNDQTQAVVLNINSPGGSPVQSGKIYREIMRLKKENKIPVYAFIEDMGASGAY 149 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I S+VGSIGV+ V L KLG+ + + KA +P + Sbjct: 150 YIAAAADQIYTDPASIVGSIGVISGGVGVGDLLKKLGLESRIFTAGAHKAFLNPAEPLKK 209 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + + MQ ++D + F+ V E R I +K L G WTG +A +GL+D + Sbjct: 210 EELAHMQTLLDDLHQQFIAAVKEGRGERINAEKNPELFSGLFWTGTQALPLGLVDSLDDF 269 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 +V L D + D+ P K+ W L+ Sbjct: 270 SQV------LARDFKDIAVIDYTPEKSPWEAFLR 297 >gi|222147714|ref|YP_002548671.1| proteinase sohB [Agrobacterium vitis S4] gi|221734702|gb|ACM35665.1| proteinase sohB [Agrobacterium vitis S4] Length = 288 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ + + A+++SL+SPGGS IF+ I+ + ++ K V+ V ++AAS GY+I Sbjct: 49 LEKAFKLKDSPAVVLSLNSPGGSPVQSRMIFQRIRTLADEHSKTVLVFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A TS+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPTSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVMLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ ++ + + F+ +V R I + L G WTG + ++GL+D +G Sbjct: 166 QSDIEYLKTLQLDIHDVFIDMVKTRRGIRLNDNPELFSGLFWTGRKGFELGLVDGLGSMR 225 Query: 232 EVWQSLYA 239 E ++ Y Sbjct: 226 EEIKARYG 233 >gi|23501300|ref|NP_697427.1| protease IV [Brucella suis 1330] gi|148560700|ref|YP_001258420.1| putative protease IV [Brucella ovis ATCC 25840] gi|161618370|ref|YP_001592257.1| peptidase S49 [Brucella canis ATCC 23365] gi|163842678|ref|YP_001627082.1| peptidase S49 [Brucella suis ATCC 23445] gi|256368852|ref|YP_003106358.1| protease IV, putative [Brucella microti CCM 4915] gi|23347188|gb|AAN29342.1| protease IV, putative [Brucella suis 1330] gi|148371957|gb|ABQ61936.1| putative protease IV [Brucella ovis ATCC 25840] gi|161335181|gb|ABX61486.1| peptidase S49 [Brucella canis ATCC 23365] gi|163673401|gb|ABY37512.1| peptidase S49 [Brucella suis ATCC 23445] gi|255999010|gb|ACU47409.1| protease IV, putative [Brucella microti CCM 4915] Length = 368 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 127 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 186 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 187 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 243 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 244 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 303 Query: 232 EVWQSLYA 239 + Y Sbjct: 304 SFLRKTYG 311 >gi|292490641|ref|YP_003526080.1| signal peptide peptidase SppA, 36K type [Nitrosococcus halophilus Nc4] gi|291579236|gb|ADE13693.1| signal peptide peptidase SppA, 36K type [Nitrosococcus halophilus Nc4] Length = 325 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 14/232 (6%) Query: 35 SPHVARIAIRGQIE-DSQELIERIER----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +PH A + + G I DS E I++ + + +I+ ++SPGGS I Sbjct: 74 TPHTALVEVDGLISADSFASAENIKKGLQTAFESEHSRGVILHINSPGGSPVQTGRINDE 133 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I +++ P I + ++ AS GY I+ A++ I A + S+VGSIG L ++ Sbjct: 134 IHRLRQEHPNIPLYAVISDVCASGGYYIAVAADQIYADKASIVGSIGALINGFGFVDAME 193 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + K PFS + Q +Q ++++ + F+++V + R + Sbjct: 194 KLGVERRLFAAGDYKGFLDPFSPIKESEAQHIQKMLENIHKQFIQIVKDGRGERLKEDPS 253 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L G +WTG +A +GLID +G + V + + KI ++ P + Sbjct: 254 LFSGLVWTGEQALTLGLIDGLGSSDYVAREIVG------AEKIVNYTPKPGF 299 >gi|254701204|ref|ZP_05163032.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella suis bv. 5 str. 513] gi|254709545|ref|ZP_05171356.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella pinnipedialis B2/94] gi|261221612|ref|ZP_05935893.1| peptidase S49 [Brucella ceti B1/94] gi|261315361|ref|ZP_05954558.1| peptidase S49 [Brucella pinnipedialis M163/99/10] gi|261317072|ref|ZP_05956269.1| peptidase S49 [Brucella pinnipedialis B2/94] gi|261324527|ref|ZP_05963724.1| peptidase S49 [Brucella neotomae 5K33] gi|261751742|ref|ZP_05995451.1| peptidase S49 [Brucella suis bv. 5 str. 513] gi|261754396|ref|ZP_05998105.1| peptidase S49 [Brucella suis bv. 3 str. 686] gi|265988110|ref|ZP_06100667.1| peptidase S49 [Brucella pinnipedialis M292/94/1] gi|265997575|ref|ZP_06110132.1| peptidase S49 [Brucella ceti M490/95/1] gi|260920196|gb|EEX86849.1| peptidase S49 [Brucella ceti B1/94] gi|261296295|gb|EEX99791.1| peptidase S49 [Brucella pinnipedialis B2/94] gi|261300507|gb|EEY04004.1| peptidase S49 [Brucella neotomae 5K33] gi|261304387|gb|EEY07884.1| peptidase S49 [Brucella pinnipedialis M163/99/10] gi|261741495|gb|EEY29421.1| peptidase S49 [Brucella suis bv. 5 str. 513] gi|261744149|gb|EEY32075.1| peptidase S49 [Brucella suis bv. 3 str. 686] gi|262552043|gb|EEZ08033.1| peptidase S49 [Brucella ceti M490/95/1] gi|264660307|gb|EEZ30568.1| peptidase S49 [Brucella pinnipedialis M292/94/1] Length = 290 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 49 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 166 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 225 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + + S Sbjct: 226 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMDS 259 >gi|261218409|ref|ZP_05932690.1| peptidase S49 [Brucella ceti M13/05/1] gi|261320742|ref|ZP_05959939.1| peptidase S49 [Brucella ceti M644/93/1] gi|260923498|gb|EEX90066.1| peptidase S49 [Brucella ceti M13/05/1] gi|261293432|gb|EEX96928.1| peptidase S49 [Brucella ceti M644/93/1] Length = 290 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 49 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 166 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 225 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + + S Sbjct: 226 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMDS 259 >gi|15022428|dbj|BAB62249.1| proteinase IV [Treponema medium] Length = 606 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 126/251 (50%), Gaps = 19/251 (7%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 DS L++ + + DDS A+++ + S GG A E I R+++++ + KPV+ + ++ Sbjct: 347 DSPTLVDLFDEAADDDSIKAVVLRIDSGGGEVNASEDIRRSLERLSKKIGKPVVVSMGDI 406 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV-KPFLDKLGVSIKSVKSSPMKAEPS 165 AAS Y I+ +++ I + ++ GSIGV P + K + G+ + V S Sbjct: 407 AASGAYWIASSADYIFCSPYTITGSIGVFAVSPSIQKAVQEYFGIHVDGVSVSGRM---- 462 Query: 166 PFSEV-NPKAVQMMQDVVD--SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P+S NP + Q ++ +Y F+ V++ RN+P L+ G+I++G +AK++ Sbjct: 463 PYSIFRNPTDAEKTQSELEVMHTYSIFLDTVAQGRNLPRATVEELAQGKIYSGTQAKELQ 522 Query: 223 LIDVVGG-QEEVWQSLYALGVDQSIR-KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 L D +GG + V + G+ ++ K+ PP + + + +LL D + K Sbjct: 523 LADELGGFTDAVNYAATKAGIKETYSLKVLYKEPP-------VTDEILKTLLADNVRFYK 575 Query: 281 QTKVQGLWAVW 291 +Q L+ ++ Sbjct: 576 TADLQVLYELF 586 >gi|294851776|ref|ZP_06792449.1| hypothetical protein BAZG_00691 [Brucella sp. NVSL 07-0026] gi|294820365|gb|EFG37364.1| hypothetical protein BAZG_00691 [Brucella sp. NVSL 07-0026] Length = 290 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 49 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 109 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 166 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTAAASLGLIDGLGDMR 225 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + + S Sbjct: 226 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMDS 259 >gi|254707871|ref|ZP_05169699.1| Clp protease [Brucella pinnipedialis M163/99/10] gi|256159103|ref|ZP_05456924.1| Clp protease [Brucella ceti M490/95/1] gi|260168171|ref|ZP_05754982.1| Clp protease [Brucella sp. F5/99] Length = 306 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 65 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 124 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 125 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 181 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 182 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 241 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + + S Sbjct: 242 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMDS 275 >gi|254713038|ref|ZP_05174849.1| Clp protease [Brucella ceti M644/93/1] gi|254716609|ref|ZP_05178420.1| Clp protease [Brucella ceti M13/05/1] Length = 306 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 65 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 124 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 125 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 181 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 182 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 241 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + + S Sbjct: 242 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMDS 275 >gi|171915041|ref|ZP_02930511.1| peptidase, U7 family protein [Verrucomicrobium spinosum DSM 4136] Length = 343 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 2/192 (1%) Query: 52 ELIER-IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 E I+R +E+ S D S A+++ ++SPGG A + ++ A++K RK V+ + +AAS Sbjct: 92 EAIQRALEQASEDKSVKAIVIRVNSPGGEVTASDNLYNAVKKAAARKKVVVYMDSIAASG 151 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++C ++ IVA ET+L SIGV+ Q K+G+ + S K S + Sbjct: 152 GYYLACGASKIVANETTLTASIGVIIQSLNYSQTFGKVGLETMTFASGKFKDTLSGSRPM 211 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGG 229 + +Q +V + Y FV +V+++RNI + ++DGR+ TG +A + L+D +G Sbjct: 212 REDEREYIQSLVSAMYDKFVGIVAKARNIDEAQLRTGVADGRVVTGKQALEYKLVDQLGY 271 Query: 230 QEEVWQSLYALG 241 E+ + LG Sbjct: 272 VEDAYALAKELG 283 >gi|149194025|ref|ZP_01871123.1| proteinase IV [Caminibacter mediatlanticus TB-2] gi|149135978|gb|EDM24456.1| proteinase IV [Caminibacter mediatlanticus TB-2] Length = 300 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 114/220 (51%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + +++ + P+VA I I I + ++ ++++ + +D + ++ ++PGGS A + Sbjct: 48 FPTNINLHKPYVAVININKTITVDYIDKITKKMDALLKDKNCKEFLLVFNTPGGSPSASD 107 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ V +K V V MAAS GY I A IVA + ++VGSIGV+ + +K Sbjct: 108 EFNAYLKYVNKKKRVNVYVESMAASGGYYIISAIKPIVANKNAVVGSIGVIMPHFVLKKL 167 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYDK 203 DK+G+ S+ K S F + + K + ++ ++ +Y F++ V++ RNI DK Sbjct: 168 ADKIGIEEDSLTIGKYKEPVSLFRKFSDKDKEYLKTHLLLPTYENFLKTVAKDRNISVDK 227 Query: 204 TLVLSDGRIWTGAEAKKV------GLIDVVGGQEEVWQSL 237 +DG+I+ + K + LIDV +EE+ + L Sbjct: 228 LKQYADGKIYVASIVKGILVDKISTLIDV---KEEIKKRL 264 >gi|302531492|ref|ZP_07283834.1| signal peptide peptidase SppA [Streptomyces sp. AA4] gi|302440387|gb|EFL12203.1| signal peptide peptidase SppA [Streptomyces sp. AA4] Length = 281 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 2/184 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 + R D A+ + ++SPGG+ + I+++ + K PV+ ++AAS GY + Sbjct: 54 LTRAFAHDRLKAVALQINSPGGAPTQSGLVAERIRQLADEKGVPVLAFAEDVAASGGYWL 113 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I A TS+VGSIGV+ L++ G+ + + K+ PFS P+ Sbjct: 114 ACAADEIYAHRTSMVGSIGVISGGFGFTGLLERFGIERRLHTAGANKSRLDPFSPEKPED 173 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 V+ ++++ + FV V E R + L G +W G +A +GL+D +G E+ Sbjct: 174 VEWLKNMHGQLHELFVEWVKERRGDRLTDSADLFTGDVWLGQKAVDLGLVDGLGSLREIV 233 Query: 235 QSLY 238 + Y Sbjct: 234 RERY 237 >gi|330878257|gb|EGH12406.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 332 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 12/227 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-IERIERISRD----DSAT 67 V V + + ++ S H A I ++G I D + E I RD + Sbjct: 55 VAFLFVAIVLPMLNFEGGASRRSSHTALIDVQGVIADKESASAENITTALRDAFGDEKTK 114 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A Sbjct: 115 GVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIASAADQIYAD 174 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + SLVGSIGV ++KLGV ++ S KA PF Q Q V+D+ Sbjct: 175 KASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQSVLDT 234 Query: 185 SYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F+ V + R D + S G IWTG + +GL+D +G Sbjct: 235 THRQFIASVKQGRGDRLKDKDHPEMFS-GLIWTGEQGVALGLVDGLG 280 >gi|240850068|ref|YP_002971461.1| protease SohB [Bartonella grahamii as4aup] gi|240267191|gb|ACS50779.1| protease SohB [Bartonella grahamii as4aup] Length = 282 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 29/236 (12%) Query: 41 IAIRGQIEDSQELIERIERISR------------DDSATALIVSLSSPGGSAYAGEAIFR 88 + ++G I DS I R +SR A ALI++ SPGGS IF+ Sbjct: 22 VRLQGAIMDSSASISRTLSLSRCANLLEKAFAHKKSPAVALIIN--SPGGSPVQSRFIFK 79 Query: 89 AIQKV---KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVK 142 I+ + KN+K V+ + ++AAS GY+I+CA + I A +S+VGSIGV+ F +P + Sbjct: 80 RIRDLAEEKNKK-VLVFIEDIAASGGYMIACAGDEIFADPSSIVGSIGVVSASFGFPEL- 137 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K+G+ + + K PF ++ ++ + + F+ LV E R Sbjct: 138 --LKKIGIERRVYTAGKNKVTLDPFQPEKKADIEHLKSLQLEVHQTFIDLVKERRAEKLS 195 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L G W+G ++ ++GL+D + V + + G D +R I PPK++ Sbjct: 196 DDSNLFTGMFWSGKQSVELGLVDGLNDVRSVIKERF--GNDAKLRLIM---PPKSF 246 >gi|225166403|ref|ZP_03728068.1| 4-phytase [Opitutaceae bacterium TAV2] gi|224799357|gb|EEG17919.1| 4-phytase [Opitutaceae bacterium TAV2] Length = 512 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 82/159 (51%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 I + DD A+++ ++SPGGSA A E I R +Q KPV+ + AAS GY I+ Sbjct: 352 IRALRLDDDIAAIVLRVNSPGGSASASEHILRELQLAAEVKPVVVSMGNYAASGGYWIAL 411 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + I A T++ GSIGV V+ + GV+ VK+ + P + Sbjct: 412 SGGRIFAEPTTITGSIGVFGLQFDVQKLANTHGVTWDGVKTGRYAGAFTLTRPKTPAEMA 471 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + Q +VD +Y F++ VS +R++ + ++ GR+W+G Sbjct: 472 IFQRLVDWTYAEFIKRVSTARSLEPARVQEIAQGRVWSG 510 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 7/131 (5%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--E 169 YL S A+ + + L+ G+ Q + L+K GV ++ +S K+ PF+ + Sbjct: 151 YLGSTATELALD-PFGLIEMPGLASQPMFFAGALEKYGVGVQVTRSGKYKSAVEPFTRAD 209 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---LVLSDGRIWTGAEAKKVGLIDV 226 ++P++ + +Q ++D + V V+++R +P T LV +G I T A GLI Sbjct: 210 LSPESREQLQKLLDDLWTTIVAEVTDTRQLPAPDTLQKLVDKEGLI-TPQAALDAGLIHR 268 Query: 227 VGGQEEVWQSL 237 + ++E+ L Sbjct: 269 IAYRDEILAEL 279 >gi|254796774|ref|YP_003081610.1| signal peptide peptidase SppA, 36K type [Neorickettsia risticii str. Illinois] gi|254589965|gb|ACT69327.1| signal peptide peptidase SppA, 36K type [Neorickettsia risticii str. Illinois] Length = 308 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 119/219 (54%), Gaps = 5/219 (2%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDS--ATALIVSLSSPGGSAYAGEAIFRAIQ 91 ++P++ R+ G I+ Q+L+ + S D+ A+I+ + S GG A A EA++ A++ Sbjct: 49 SAPYIGRVVFSGIID--QDLVRNSQFASFADNPKIKAVILHVDSGGGGAAASEALYNAVR 106 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 V KPV+ + M AS Y+++ A+ IVA +S+VGSIG++ Q P K+G+ Sbjct: 107 SVSLVKPVVVVANGMMASGAYMVAMAAEHIVAYNSSIVGSIGMILQAPNFHEIGKKVGIK 166 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDG 210 + V+S +KA PS E +A M+ + + F+ +V E R I + + ++ G Sbjct: 167 MDVVRSGRLKAFPSILEEFTKEARSSMEHSISVANEHFLSMVQERRKITDARVMSEIATG 226 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 +I+TG EA + L+D +G + + L +G+ IR + Sbjct: 227 KIFTGKEALEFALVDEIGDETNAVRWLKEMGITGKIRDL 265 >gi|83593953|ref|YP_427705.1| peptidase S49 [Rhodospirillum rubrum ATCC 11170] gi|83576867|gb|ABC23418.1| Peptidase S49 [Rhodospirillum rubrum ATCC 11170] Length = 593 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 7/185 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMA 107 D++ L I+ D A+++ + SPGGS + ++RA+ + + PVI + ++A Sbjct: 326 DARALAATIDSAVDDAGVAAIVLRIDSPGGSYVGSDLVWRAVSRARQHGLPVIASMGDVA 385 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEP 164 AS GY ++ +N IVA +L GSIGV+ + + LG++ +++ +++ + + Sbjct: 386 ASGGYYMAMGANKIVAQPGTLTGSIGVVAGKFTIAKASEDLGIAWGGVEAGRNAALFSLT 445 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 PF E + M ++D+ Y F + R + + + GR+WTG +A GL+ Sbjct: 446 DPFDEAGQR---RMDQILDAIYADFTGKAAAGRGLSPEAIEEAARGRVWTGEDALAHGLV 502 Query: 225 DVVGG 229 D +GG Sbjct: 503 DALGG 507 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%) Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGV--------SIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + ++G+ G + P+V+ LD LG+ K ++ + SP E++ A+ Sbjct: 157 SGMLGTTGFAVRMPFVRKLLDDLGILPQFIARKEFKDAAATATQYGMSPAQEISFGAL-- 214 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V VR V+E+R + D+ L D AEA + GLID +G +E +++ Sbjct: 215 ----VQGWSGQVVRAVAEARGLSEDQVRGLIDRSPLLAAEALESGLIDRLGYPDEARKAM 270 >gi|296136836|ref|YP_003644078.1| peptidase S49 [Thiomonas intermedia K12] gi|295796958|gb|ADG31748.1| peptidase S49 [Thiomonas intermedia K12] Length = 327 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 15/235 (6%) Query: 11 RYVMLSLVTL-----TVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDD 64 R+V+L +V L + F S+ PH A I + G+I SQ + I +D Sbjct: 49 RFVLLGIVALIFFGGMIAEFGSSTAT---GPHTALIELNGEISIGSQASADNINAALQDA 105 Query: 65 SAT----ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCAS 118 ++ +I+ ++SPGGS IF I++++ + KPV E+ AS Y ++ A+ Sbjct: 106 FSSPDTRGVILRINSPGGSPVQASQIFAEIERLRAKYNKPVYAVCEEVCASGAYYVAAAA 165 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I SLVGSIGVL +DKLGV+ + + + K PF+ + Sbjct: 166 NDIYVNPASLVGSIGVLMDGFGFSGLMDKLGVTRRLLTAGANKGFMDPFTPMPEDQKTYA 225 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +++ + F+ V + R G +WTG A K GL D G +++ Sbjct: 226 LGMLEQIHKQFIAAVEKGRGARLKVNDETFSGLVWTGESAVKQGLADGYGDVDQI 280 >gi|82699311|ref|YP_413885.1| Clp protease [Brucella melitensis biovar Abortus 2308] gi|237814870|ref|ZP_04593868.1| Na+/H+ antiporter NhaA [Brucella abortus str. 2308 A] gi|82615412|emb|CAJ10381.1| Clp protease:Peptidase U7:Na+/H+ antiporter NhaA [Brucella melitensis biovar Abortus 2308] gi|237789707|gb|EEP63917.1| Na+/H+ antiporter NhaA [Brucella abortus str. 2308 A] Length = 763 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 522 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 581 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 582 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 638 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 639 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 698 Query: 232 EVWQSLYA 239 + Y Sbjct: 699 SFLRKTYG 706 >gi|306842302|ref|ZP_07474963.1| Clp protease [Brucella sp. BO2] gi|306287581|gb|EFM59035.1| Clp protease [Brucella sp. BO2] Length = 255 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 13/219 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 14 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 73 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 74 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVHTAGSNKVTLDPFQPEK 130 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 131 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 190 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + ++S Sbjct: 191 SFLRKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMNS 224 >gi|297621858|ref|YP_003709995.1| putative signal peptide peptidase sppA [Waddlia chondrophila WSU 86-1044] gi|297377159|gb|ADI38989.1| putative signal peptide peptidase sppA [Waddlia chondrophila WSU 86-1044] Length = 346 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 20/223 (8%) Query: 33 DNSPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 DN+P + +++I G I SQ L E E + ++D A++V +SSPGG+ + Sbjct: 68 DNAPVILKLSISGLIGTESLNMNTVSQILQESREGLFKNDRVKAVLVQISSPGGTVVDSD 127 Query: 85 AIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL----FQY 138 I+RA+++ K P+ V + AS G I+ A + + A + SL+GS+GVL F + Sbjct: 128 GIYRALKQYKKDYNVPIYGFVDGLCASGGMYIASACDKVYATDVSLIGSVGVLSPAFFNF 187 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++K+GV K + + K +P ++ ++DS Y+ FV +V E+R Sbjct: 188 T---ELMEKVGVDAKVLSAGKGKDALNPLRPWKEGEADSLKAIIDSYYNQFVDIVVENRP 244 Query: 199 IPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +T +++D ++ ++A+++G ID G E L A Sbjct: 245 -DIKRTHLINDYGAHVYLASKAQELGYIDGSGFTYEETMKLLA 286 >gi|159464533|ref|XP_001690496.1| signal peptide peptidase [Chlamydomonas reinhardtii] gi|158279996|gb|EDP05755.1| signal peptide peptidase [Chlamydomonas reinhardtii] Length = 745 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 98/180 (54%), Gaps = 6/180 (3%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I ++ +++D S A+++ + SPGG A A + ++R I+++ KPVI + ++AAS GY Sbjct: 396 VIPKLRALAKDKSVAAVVLRVDSPGGDALAADLMWREIRQLDAVKPVIASMADVAASGGY 455 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSPMKAEPSPFSE 169 + A+ IVA ++ GSIGV+ + K+G + + + + + + A+ FS+ Sbjct: 456 YMGMAARAIVAEPLTITGSIGVVTGKFNLSELYAKIGYNKELISWGRFAELLADNRSFSK 515 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ +Y F + SR++ + ++ GR+W+G A KV L+D +GG Sbjct: 516 ---EEAELFDASAQHAYESFRNKAASSRDMDVEDMQAVAQGRVWSGNAAIKVKLVDALGG 572 >gi|284117617|ref|ZP_06386744.1| protease IV [Candidatus Poribacteria sp. WGA-A3] gi|283829490|gb|EFC33855.1| protease IV [Candidatus Poribacteria sp. WGA-A3] Length = 785 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 1/185 (0%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ + + ++ + DDS A+++ + S GG A + I+R + ++K KP++ + + Sbjct: 485 QVMGADTITRIVKEVKDDDSVKAVVLRIDSGGGLVVAADTIWRELVRLKEVKPLVVSMGD 544 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 +AAS GY I+ ++ IVA ++ GSIGV+ K +KLG+ + +K + Sbjct: 545 VAASGGYYIAAPADTIVAEPGTITGSIGVIGGKYSFKGLYEKLGIHKEILKRGQHADFYT 604 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLI 224 + + ++Q + Y F V+ R + + L GR+W+G +AK+ GL+ Sbjct: 605 DYGDYPLAEKAIVQKQIKEIYDDFTEKVALGRTELTVEDVDRLGRGRVWSGRQAKENGLV 664 Query: 225 DVVGG 229 D +GG Sbjct: 665 DELGG 669 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 9/208 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISR-DDSATALIVSLSSPGGS 79 V YF +S N+P I R D ++++ I++ DD ++V + G Sbjct: 215 VGYFHFS-----NAPKTKSIPRRKTFLDLPMRSLKQVLPIAKWDDDVAGILVRIDGSGYG 269 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + AI + V+ ++ Y+++ A + I+ ++ V IG+ ++ Sbjct: 270 IAQLQEMSDAILDFRESGRVVFCYLSNCSTGDYMVASACDGILIQPSAEVRLIGIRTEHS 329 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN-PKAVQMMQDVV-DSSYHWFVRLVSESR 197 + K LD LG+ K+ F+ + KA + +Q+++ D Y VR ++E R Sbjct: 330 FYKGALDLLGIRANLEHLGEYKSASDAFTRRDMSKAHREIQNIILDDLYDQLVRAIAEGR 389 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + D +T +A V L+D Sbjct: 390 GWTRESVRKRIDEGPYTARQAFAVELVD 417 >gi|304321517|ref|YP_003855160.1| peptidase S49 [Parvularcula bermudensis HTCC2503] gi|303300419|gb|ADM10018.1| peptidase S49 [Parvularcula bermudensis HTCC2503] Length = 280 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 100/187 (53%), Gaps = 5/187 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLI 114 +E+ + A+++S++SPGGS I + ++ V+++ PVI + ++ AS GY++ Sbjct: 47 LEKAFKTGEPRAVLLSINSPGGSPVQSRMILQKVRDLSVEHKVPVIAHIQDVGASGGYML 106 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A + I A +LVGSIGV+ + + +LG+ + + K++ PF +P+ Sbjct: 107 ALAGDEIYADPFALVGSIGVIAGGFGLHEAIGRLGIERRVYTAGENKSQLDPFRPEDPRD 166 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V ++ ++D S+ F+ LV R + + +V + G W EA+ +GLID V ++ Sbjct: 167 VAHLKGILDKSHALFIDLVKTRRGDRLKGEDKIVFT-GDFWIADEAQALGLIDGVEDRDA 225 Query: 233 VWQSLYA 239 + + + Sbjct: 226 LLKRRFG 232 >gi|253996198|ref|YP_003048262.1| peptidase S49 [Methylotenera mobilis JLW8] gi|253982877|gb|ACT47735.1| peptidase S49 [Methylotenera mobilis JLW8] Length = 332 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 11/237 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-----IERIER 59 K + Y+++ L+ L + +E H A I I G I+ ++ I ++ Sbjct: 47 FKSLTFGYLLIFLLMLFGIMGGDKKSLE---AHTALIEINGVIQAGGDVTADAVISSLKE 103 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 + +I+ ++SPGGS I I++ K P V V ++ AS GY I+ Sbjct: 104 AYDNKGTKGIILRVNSPGGSPVQAGIINDEIRRQKTLHPSIPVYAVVEDICASGGYYIAA 163 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL + K+GV + + + KA PFS VNP + Sbjct: 164 AADKIYVDKASIVGSIGVLMDGYGFTEAMKKVGVERRLMTAGENKAMLDPFSPVNPHHQE 223 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q +++ + F +V + R +T G W+G ++ K+GL D +G E V Sbjct: 224 LAQAMLNEIHEQFKTVVRQGRGARLKETPETFSGLFWSGEQSIKIGLADGMGSAEYV 280 >gi|89900513|ref|YP_522984.1| peptidase S49 [Rhodoferax ferrireducens T118] gi|89345250|gb|ABD69453.1| peptidase S49 [Rhodoferax ferrireducens T118] Length = 356 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 7/200 (3%) Query: 36 PHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH A + I+G+I + ++ + D A A+++ ++SPGGS I + Sbjct: 106 PHTAVVEIKGEIASGADASADAIVASLRDAFEDAGAQAVVLLINSPGGSPVQAGIINDEL 165 Query: 91 Q--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 K K+ KPV V E ASA Y I+ A++ I + S+VGSIGVL ++KL Sbjct: 166 HRLKAKHNKPVYAVVEETCASAAYYIAVAADKIYVDKASIVGSIGVLMDGFGFTGLMEKL 225 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + + K PFS K Q +++ + F+ +V R +T Sbjct: 226 GVERRLMTAGENKGFLDPFSPQTEKQRVFAQAMLNQIHQQFIDVVKAGRGTRLKETPETF 285 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 G W+G +A ++GL D G Sbjct: 286 SGLFWSGQQAIELGLADQFG 305 >gi|261213422|ref|ZP_05927703.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 3 str. Tulya] gi|260915029|gb|EEX81890.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 3 str. Tulya] Length = 723 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 482 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 541 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 542 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 598 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 599 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 658 Query: 232 EVWQSLYA 239 + Y Sbjct: 659 SFLRKTYG 666 >gi|189023636|ref|YP_001934404.1| Clp protease [Brucella abortus S19] gi|254688698|ref|ZP_05151952.1| Clp protease [Brucella abortus bv. 6 str. 870] gi|254696825|ref|ZP_05158653.1| Clp protease [Brucella abortus bv. 2 str. 86/8/59] gi|189029213|sp|Q2YMB3|NHAA_BRUA2 RecName: Full=Na(+)/H(+) antiporter nhaA; AltName: Full=Sodium/proton antiporter nhaA gi|189019208|gb|ACD71930.1| Clp protease [Brucella abortus S19] Length = 736 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 495 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 554 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 555 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 611 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 612 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 671 Query: 232 EVWQSLYA 239 + Y Sbjct: 672 SFLRKTYG 679 >gi|67459011|ref|YP_246635.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] gi|67004544|gb|AAY61470.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] Length = 304 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A+ +S++GSIGV+ ++KLG+ + KA Sbjct: 119 DMAASGGYWLACSGDWIYASYSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKAIL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N + +++++++ Y FV V R + +L +G W G A GL Sbjct: 179 DPFKPINKEDLKIIKNLQQQVYEHFVDYVKTRRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVG 228 ID +G Sbjct: 239 IDGIG 243 >gi|260545864|ref|ZP_05821605.1| clp protease [Brucella abortus NCTC 8038] gi|260754175|ref|ZP_05866523.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 6 str. 870] gi|260761219|ref|ZP_05873562.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 2 str. 86/8/59] gi|260097271|gb|EEW81146.1| clp protease [Brucella abortus NCTC 8038] gi|260671651|gb|EEX58472.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 2 str. 86/8/59] gi|260674283|gb|EEX61104.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 6 str. 870] Length = 723 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 482 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 541 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 542 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 598 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 599 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 658 Query: 232 EVWQSLYA 239 + Y Sbjct: 659 SFLRKTYG 666 >gi|254693181|ref|ZP_05155009.1| Clp protease [Brucella abortus bv. 3 str. Tulya] Length = 736 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 495 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 554 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 555 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 611 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 612 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 671 Query: 232 EVWQSLYA 239 + Y Sbjct: 672 SFLRKTYG 679 >gi|92118679|ref|YP_578408.1| peptidase S49 [Nitrobacter hamburgensis X14] gi|91801573|gb|ABE63948.1| peptidase S49 [Nitrobacter hamburgensis X14] Length = 293 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 3/175 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER D+A A+ + ++SPGGS IF I+++ K PV+ V ++AAS GY+I Sbjct: 52 LERAFAVDNAKAVALLVNSPGGSPVQSRQIFLRIRQLAQEKKLPVLVFVEDVAASGGYMI 111 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + IV +S++GSIGV+ + K+GV + + KA PF NP Sbjct: 112 ACAGDEIVCDPSSILGSIGVVGGSFGFTELIGKIGVERRLYTAGEHKATLDPFLPENPDD 171 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V ++ + + F+ LV SR + +L G W G + +GL D +G Sbjct: 172 VARLKAIQREIHATFIELVKTSRGARLKGEDDLLFTGEYWAGERSVALGLADAIG 226 >gi|221640571|ref|YP_002526833.1| peptidase S49 [Rhodobacter sphaeroides KD131] gi|221161352|gb|ACM02332.1| Peptidase S49 [Rhodobacter sphaeroides KD131] Length = 250 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 3/198 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE- 102 RG + D Q L IE+ R + + ++SPGGS I I+++ + K V Sbjct: 13 RGGLSD-QGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLIAARIRRLASEKGVRVHA 71 Query: 103 -VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++CA + I E+SLVGSIGV+F F+ + G+ + + K Sbjct: 72 FVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFMARNGIERRVHTAGRSK 131 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF P+ V+ ++ + + + F+ V +R D L + +WTG EA ++ Sbjct: 132 SLADPFLPEKPEDVERLRALQEPIHRAFIEHVKRNRGARLDLNADLFNADVWTGQEAVRL 191 Query: 222 GLIDVVGGQEEVWQSLYA 239 GL D V Q +Y Sbjct: 192 GLADGVAHLVPKLQEIYG 209 >gi|257454429|ref|ZP_05619691.1| signal peptide peptidase SppA, 36K type [Enhydrobacter aerosaccus SK60] gi|257448195|gb|EEV23176.1| signal peptide peptidase SppA, 36K type [Enhydrobacter aerosaccus SK60] Length = 360 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 16/217 (7%) Query: 26 SWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSA 80 S S ++ + PH+A + ++G I +SQ + E + +D A A+ + ++SPGGS Sbjct: 87 SGMSDIDMSKPHLAVVDVKGVISSDNEANSQAVGEALTEAFDNDQAQAVALRINSPGGSP 146 Query: 81 YAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I++ + +++ P + + +M AS Y I+ A++ I +SLVGSIGV+ Sbjct: 147 VQSDEIWQTMTELRKAHPNKKLYAVIEDMGASGAYYIASAADEIWVNPSSLVGSIGVIMP 206 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 V+ +DKLGV ++ + K + P SE Q +Q V+D+++ F+ V Sbjct: 207 SYNVQGLMDKLGVKDGTMTAGAHKDILSMSRPLSEFE---RQHVQGVLDNTHAHFINAVK 263 Query: 195 ESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + R + L G W+G +A +GL D GG Sbjct: 264 QGRGNRLKNPDANQLFSGLFWSGEQAINLGLADKKGG 300 >gi|325283414|ref|YP_004255955.1| peptidase S49 [Deinococcus proteolyticus MRP] gi|324315223|gb|ADY26338.1| peptidase S49 [Deinococcus proteolyticus MRP] Length = 534 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 97/173 (56%), Gaps = 8/173 (4%) Query: 59 RISRDDSATALIV-SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 R +++D TA IV ++S GGSA A + I+R +Q + KPV+ + AAS GY + A Sbjct: 300 RHAKEDRTTAAIVLYVNSGGGSALASDLIWREVQT--SEKPVVAVMGAFAASGGYYVLAA 357 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV--KSSPMKAEPSPFSEVNPKAV 175 ++ ++A+ S+ GSIGV+ P + F + G++ + + + + M P +E + Sbjct: 358 ADRVIASPYSMTGSIGVVAGRPITEEFNRRHGLNPEQLGREEALMFHSSHPLTE---RQR 414 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + +Y FV V++ R + ++ L GRIW+GA+A + GL+D +G Sbjct: 415 DYLRRAIAETYARFVDRVAQGRGLSTEQVDELGRGRIWSGADALERGLVDELG 467 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 94/185 (50%), Gaps = 3/185 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L ER++R++R + ++V SA A AI + ++ K V+ + ++ + Sbjct: 51 EALEERLDRLARAEWLHGVLVRFGELKLSAAAARAIQGMLSRLAAEKRVVAYLPQVNMTT 110 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS-- 168 L + ++ +VA E++ +G G + Y+ FL K G+ ++++ K+ +PFS Sbjct: 111 -LLAASGASELVAPESAEMGLHGFGLEQLYLGDFLKKHGIGFENLRIREYKSALTPFSDS 169 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E++ + +QD +DS + +V+ V++ R + + +G + +A + G++ V Sbjct: 170 EMDGANREQLQDYLDSCENAWVQDVAQGRGLSEAQVRGWIEGGVTGARQALEAGILTGVA 229 Query: 229 GQEEV 233 ++E+ Sbjct: 230 YEDEL 234 >gi|163867860|ref|YP_001609064.1| protease [Bartonella tribocorum CIP 105476] gi|161017511|emb|CAK01069.1| protease [Bartonella tribocorum CIP 105476] Length = 282 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 17/197 (8%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKV---KNRKPVITEVHEMAASAGYLISCASNIIVAA 124 ALI++ SPGGS IF+ I+ + KN+K V+ + ++AAS GY+I+CA + I A Sbjct: 61 ALIIN--SPGGSPVQSRFIFKRIRDLAEEKNKK-VLVFIEDIAASGGYMIACAGDEIFAD 117 Query: 125 ETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +S+VGSIGV+ F +P + L K+GV + + K PF ++ ++ + Sbjct: 118 PSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGKNKVTLDPFQPEKKADIEHLKSL 174 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F+ LV E R L G W+G ++ ++GLID + V + + G Sbjct: 175 QLEVHQTFIDLVKERRATKLSDDSNLFTGMFWSGKKSVELGLIDGLNDVRSVIKERF--G 232 Query: 242 VDQSIRKIKDWNPPKNY 258 D +R I PPK++ Sbjct: 233 SDAKLRLI---TPPKSF 246 >gi|300782067|ref|YP_003762358.1| serine protease [Amycolatopsis mediterranei U32] gi|299791581|gb|ADJ41956.1| serine protease [Amycolatopsis mediterranei U32] Length = 281 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 2/184 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 + R D A+ + ++SPGG+ + I+++ + K PV+ ++AAS GY + Sbjct: 54 LTRAFGHDRLKAVALLVNSPGGAPTQSGLVAERIRQLADEKGVPVLAFCEDVAASGGYWL 113 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I A TS+VGSIGV+ L++ G+ + + K+ PFS P+ Sbjct: 114 ACAADEIYAHRTSMVGSIGVISGGFGFTGLLERFGIERRLHTAGANKSRLDPFSPEKPED 173 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 V+ ++ + + FV V E R T L G +W GA+A +GLID +G ++ Sbjct: 174 VEWLKKMHTQLHELFVNWVKERRGDRLTDTEDLFTGDVWLGAKALDLGLIDGLGSLRQII 233 Query: 235 QSLY 238 Y Sbjct: 234 TERY 237 >gi|91775677|ref|YP_545433.1| peptidase S49 [Methylobacillus flagellatus KT] gi|91709664|gb|ABE49592.1| peptidase S49 [Methylobacillus flagellatus KT] Length = 312 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 11/230 (4%) Query: 15 LSLVTLTVVYF---SWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSA 66 L + L ++ F W+ + H A I I G I ++ +I ++ Sbjct: 40 LGFLYLFIILFYITGWNEGRSASMEHTALIDIDGVIGSDDVVNADSVIASLKSAYESKGT 99 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVA 123 +I+ ++SPGGS I I++ + P I V ++ AS GY I+ A++ I Sbjct: 100 KGIILRINSPGGSPVQAGIINDEIKRQRKLHPNIPIYAVVQDVCASGGYYIAVAADKIFV 159 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S+VGSIGVL +DK+GV + + + K PFS V+PK + Q ++D Sbjct: 160 DKASIVGSIGVLMDGFGFTGAMDKVGVERRLMTAGENKGMLDPFSPVSPKHREFAQQMLD 219 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + F+ +V E R +T G W+G + +GL D G + V Sbjct: 220 QIHAQFIAVVREGRGKRLKETPETFSGLFWSGESSVAMGLADGFGSSDYV 269 >gi|77464657|ref|YP_354161.1| S49 family peptidase [Rhodobacter sphaeroides 2.4.1] gi|77389075|gb|ABA80260.1| Peptidase family S49 [Rhodobacter sphaeroides 2.4.1] Length = 265 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 3/186 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE- 102 RG + D Q L IE+ R + + ++SPGGS I I+++ + K V Sbjct: 28 RGGLSD-QGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLIAARIRRLASEKGVRVHA 86 Query: 103 -VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++CA + I E+SLVGSIGV+F F+ + G+ + + K Sbjct: 87 FVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFMARNGIERRVHTAGRSK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF P+ V+ ++ + + + F+ V R D L + +WTG EA ++ Sbjct: 147 SLADPFLPEKPEDVERLKALQEPIHRAFIEYVKRHRGTRLDLNADLFNADVWTGQEAVRL 206 Query: 222 GLIDVV 227 GL D V Sbjct: 207 GLADGV 212 >gi|28870992|ref|NP_793611.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato str. DC3000] gi|28854241|gb|AAO57306.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato str. DC3000] gi|331019162|gb|EGH99218.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 332 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 12/227 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-IERIERISRD----DSAT 67 V V + + + S H A I ++G I D + E I RD + Sbjct: 55 VAFLFVAIVLPMLDFEGGASRRSSHTALIDVQGVIADKESASAENITTALRDAFGDEKTK 114 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A Sbjct: 115 GVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIASAADQIYAD 174 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + SLVGSIGV ++KLGV ++ S KA PF Q Q V+D+ Sbjct: 175 KASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQSVLDT 234 Query: 185 SYHWF---VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F V+L R D + S G +WTG +A +GL+D +G Sbjct: 235 THRQFIASVKLGRGDRLKDKDHPEMFS-GLVWTGEQAVALGLVDGLG 280 >gi|84685232|ref|ZP_01013131.1| peptidase, family S49 [Maritimibacter alkaliphilus HTCC2654] gi|84666964|gb|EAQ13435.1| peptidase, family S49 [Rhodobacterales bacterium HTCC2654] Length = 264 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 4/187 (2%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RGQ+ D + IER R A+ +S++SPGGS I I+++ + K PV Sbjct: 28 RGQLNDVA-MAGPIERAFRR-KPKAVALSINSPGGSPVQSSLIAARIRRLADEKEVPVYA 85 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V + AAS GY ++CA++ I A +S++GSIGV+ F+ K G+ + S K Sbjct: 86 FVEDAAASGGYWLACAADEIYADRSSILGSIGVIMASFGAHEFIAKHGIERRVYTSGESK 145 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 ++ PF +PK V+ ++ V + F+ V +R L G W G +A + Sbjct: 146 SQLDPFKPEDPKDVERIKAVGSEIHEAFIEHVKAARKDKLADDPSLFTGEFWVGQKAVDL 205 Query: 222 GLIDVVG 228 GL D +G Sbjct: 206 GLADGIG 212 >gi|74317578|ref|YP_315318.1| protease [Thiobacillus denitrificans ATCC 25259] gi|74057073|gb|AAZ97513.1| protease [Thiobacillus denitrificans ATCC 25259] Length = 313 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNS-----PHVARIAIRGQIEDSQE----LIERIERISRDDS 65 L + L +V F + D+ H A + ++G I Q +I ++ D Sbjct: 37 LGFLYLFIVLFLVAGWFGDDGVGIPKAHTALVDLQGVIASDQASADAVITSLQSAFEDKK 96 Query: 66 ATALIVSLSSPGGSAYAGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +++ ++SPGGS I+ R ++K+ + P+ V ++ AS GY ++ ++ I Sbjct: 97 TKGVVLRINSPGGSPVQAGQIYDEIRRLRKLHPQVPLYAVVDDICASGGYYVAVGADKIF 156 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + S+VGSIGVL + KLGV + + + K PFS VNP+ + ++ Sbjct: 157 VDKASIVGSIGVLMDGFGFTETMQKLGVERRLLTAGENKGFLDPFSPVNPEQQAYAKQML 216 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + F+ V E R +T + G +W+G + ++GL D +G + V Sbjct: 217 EEIHGQFIATVREGRGKRLKETPDMFTGLVWSGERSIQLGLADEIGSLDTV 267 >gi|126463497|ref|YP_001044611.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17029] gi|126105161|gb|ABN77839.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17029] Length = 265 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 3/198 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE- 102 RG + D Q L IE+ R + + ++SPGGS I I+++ + K V Sbjct: 28 RGGLSD-QGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLIAARIRRLASEKGVRVHA 86 Query: 103 -VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++CA + I E+SLVGSIGV+F F+ + G+ + + K Sbjct: 87 FVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFMARNGIERRVHTAGRSK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF P+ V+ ++ + + + F+ V R D L + +WTG EA ++ Sbjct: 147 SLADPFLPEKPEDVERLKALQEPIHRAFIEHVKRHRGARLDLNADLFNADVWTGQEAVRL 206 Query: 222 GLIDVVGGQEEVWQSLYA 239 GL D V Q +Y Sbjct: 207 GLADGVAHLVPKLQEIYG 224 >gi|332157800|ref|YP_004423079.1| protease IV [Pyrococcus sp. NA2] gi|331033263|gb|AEC51075.1| protease IV [Pyrococcus sp. NA2] Length = 329 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 103/193 (53%), Gaps = 3/193 (1%) Query: 38 VARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +A + I G I++ + ++I+RI I + + +++ + SPGG I+ ++K+ + Sbjct: 85 IAILPIFGPIDEELALKIIKRIREIRSNRTIGGVLLWIESPGGYVGPVREIYEELKKLSH 144 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KP++ A S Y I+CA+ I+A + VGSIGV++ + + + + G+ ++ Sbjct: 145 LKPIVAYTGGYAYSGAYYIACAAQKIIADPLADVGSIGVIYVHFNAEKYYENNGIEVEVF 204 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ P K + + + P+ +++++ + + + F+ +VSE RN+ ++ + GR W Sbjct: 205 KTGPYKDMGADWRGLTPEEREIIKNQIQTYFDDFISVVSEGRNMTIEEVKKFATGRTWFA 264 Query: 216 AEAKKVGLIDVVG 228 + L+D +G Sbjct: 265 KDVNGT-LVDELG 276 >gi|332529429|ref|ZP_08405388.1| peptidase S49 [Hylemonella gracilis ATCC 19624] gi|332041075|gb|EGI77442.1| peptidase S49 [Hylemonella gracilis ATCC 19624] Length = 382 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 9/231 (3%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP--HVARIAIRGQI----EDSQELIERIERI 60 KI R + L L L + SH +P H A ++IRG+I E +L+ R Sbjct: 101 KIANRMIFLFLFLLMLWLLFRPSHPGTATPQKHTAVVSIRGEISSDSEAGADLVLAAARE 160 Query: 61 SRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCA 117 + +++ A A+++ + SPGGS I I ++K ++KPV V E ASA Y I+ + Sbjct: 161 AFENTDAQAVVLLIDSPGGSPVQAGIINDEILRLKALHKKPVYAVVEESCASAAYYIAVS 220 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS + Sbjct: 221 ADRIFVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLMTAGENKGFLDPFSPQTVSQREH 280 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q +++ + F+ +V R +T G WTG +A ++GL D +G Sbjct: 281 AQAMLNQIHQQFIAVVKAGRGKRLQETPDTFSGLFWTGEQAVQMGLADQLG 331 >gi|220934529|ref|YP_002513428.1| peptidase S49 [Thioalkalivibrio sp. HL-EbGR7] gi|219995839|gb|ACL72441.1| peptidase S49 [Thioalkalivibrio sp. HL-EbGR7] Length = 311 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 9/203 (4%) Query: 35 SPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 PH A + I+G I +S + + + + + RD + A+++ ++SPGGS I Sbjct: 60 GPHTALVDIQGVISESSQASADLVTQGLRQAFRDKNTVAVMLRVNSPGGSPVQSAYINNE 119 Query: 90 IQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 ++++K P V + ++ AS GY +++ I A +S+VGSIGV + +D Sbjct: 120 LRRLKAEHPDTPVYAVISDVGASGGYYAVVSADYIYADASSVVGSIGVRMDGFGLVEAID 179 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-L 205 KLG+ + + + K PF V+P+ +Q ++D+ + FV V R + Sbjct: 180 KLGIERRLMTAGENKGLLDPFLPVDPREQAHVQRLLDNIHAQFVDAVKTGRGDRLKGSDE 239 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 L +G IWTG EA +G+ID +G Sbjct: 240 ELFNGLIWTGDEALALGIIDGLG 262 >gi|257386269|ref|YP_003176042.1| peptidase S49 [Halomicrobium mukohataei DSM 12286] gi|257168576|gb|ACV46335.1| peptidase S49 [Halomicrobium mukohataei DSM 12286] Length = 307 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 25/236 (10%) Query: 5 LKKIKTRYVMLSLVTLTV---VYFSWSSHV--EDNSPHVARIAIRGQIED--SQELIERI 57 +K + T Y ++ +V L + V + SS + D+ +A + I+G I + E+ ++ Sbjct: 9 VKTLLTSYTVIIVVALLIGAAVGPAVSSALFQSDDEGTIAAVTIQGPISGPTADEVTRQL 68 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + DDS A+++ + S GGS A EA +RA++++ KPV+T V +AAS Y + Sbjct: 69 RTLRTDDSIDAVVLRIDSGGGSVAASEAQYRAVKRLAREKPVVTSVRGVAASGAYYTALP 128 Query: 118 SNIIVAAETSLVGSIGV--LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 S+ I A LVGS+GV L P P +SV + P KA ++ + Sbjct: 129 SDEIYATPGGLVGSVGVRALIPQPDGVP---------RSVTTGPDKAGGLTGDDIRGQVE 179 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + VDS Y +S SR L++ ++++GA A GL D +GG E Sbjct: 180 TLKRSFVDSVYAERGDRLSLSRT-------ELTNAKVYSGAAAVDNGLADEIGGLE 228 >gi|170695403|ref|ZP_02886548.1| peptidase S49 [Burkholderia graminis C4D1M] gi|170139594|gb|EDT07777.1| peptidase S49 [Burkholderia graminis C4D1M] Length = 331 Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 10/232 (4%) Query: 7 KIKTRYVMLSLVTLTV-VYFSWSS-HVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 KI R + L+LV V F +S + + H A IA+ G+I +++++ +E Sbjct: 47 KIFFRLLFLALVAFVVWTVFDFSGDKLAASGRHTALIALEGEISANTRANAEDISAALES 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLISC 116 D +I+ SPGGS I+ +++++ + P I V +M AS GY + Sbjct: 107 AFEDSGTAGVILRCDSPGGSPVQAGIIYDQMRRLRAKHPSIPLYVVVGDMCASGGYYAAA 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A + I + S+VGSIGVL +DKLG+ + S K PFS PK Q Sbjct: 167 AGDKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFYDPFSPETPKMDQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q+++D + F+ V + R +T + G WTG ++ ++GL D G Sbjct: 227 HAQEMLDQIHAQFIEAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGFG 278 >gi|295107483|emb|CBL05026.1| signal peptide peptidase SppA, 36K type [Gordonibacter pamelaeae 7-10-1-b] Length = 356 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 2/189 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++S GG+A AGE + +++ KPV+ M ASA Y IS ++ I A+ Sbjct: 132 AVVLRVNSGGGTATAGEEMAAYVREFSESSGKPVVVSSASMNASAAYEISSQADFIYTAK 191 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T+ +G+IG Q + LDKLG+SI++V SS K + + Q++V+ Sbjct: 192 TTAIGAIGTALQVTDLSGLLDKLGISIENVTSSDSKDSSYGTRPLTEEERAYYQNMVNQI 251 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 F++ V+E R++ ++ L+ G +TG EA + GL D +G +E+ L + Sbjct: 252 NETFIQTVAEGRDMTVEEVRALATGLTFTGMEAVENGLADEIGTREDAVAKAAELANTTA 311 Query: 246 IRKIKDWNP 254 + +K NP Sbjct: 312 YKTVKLDNP 320 >gi|114705272|ref|ZP_01438180.1| Clp protease:Peptidase U7:Na+/H+ antiporter NhaA [Fulvimarina pelagi HTCC2506] gi|114540057|gb|EAU43177.1| Clp protease:Peptidase U7:Na+/H+ antiporter NhaA [Fulvimarina pelagi HTCC2506] Length = 298 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 4/186 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ + A+ V ++SPGGS I++ I+ + +K V+ V ++AAS GY+I Sbjct: 51 LEKAFSQKGSPAVAVIVNSPGGSPVQSRLIYKRIRDLAEDKKKRVLVFVEDVAASGGYMI 110 Query: 115 SCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 +CA + I+A +S+VGSIGV+ + +V+ + KLG+ + + K PF P+ Sbjct: 111 ACAGDEIIADPSSIVGSIGVVSGSFGFVEA-ISKLGIERRVHTAGKNKVTLDPFQPEKPE 169 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+ ++ + + F+ LV SR + L G W+G +A +GLID +G V Sbjct: 170 DVERLKALQLDVHDTFIDLVKASRKNKLAENDDLFTGLFWSGRQALDLGLIDRLGDLHSV 229 Query: 234 WQSLYA 239 + LY Sbjct: 230 VRELYG 235 >gi|149197052|ref|ZP_01874104.1| protease IV [Lentisphaera araneosa HTCC2155] gi|149139598|gb|EDM27999.1| protease IV [Lentisphaera araneosa HTCC2155] Length = 587 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 4/204 (1%) Query: 34 NSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 N+ +A + + G I+ + L I R S++D A+++ ++SPGGSA A E I +A + Sbjct: 285 NNDILALVNLDGTIDTRMGEALRRYIMRASQNDKVKAMVLRINSPGGSALASEMICQATE 344 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + K K + + +AAS GY + I A ++ GSIGVL + DK+G+ Sbjct: 345 EFKKTGKTFVVSMSNVAASGGYYSAVFGEPIYAESATITGSIGVLGGKLVMSKMFDKIGI 404 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSD 209 S K S S N + + ++ Y F + + R L ++ Sbjct: 405 STHEFKIGKYSDINSSTSFFNEDQRAKITESMNRVYDVFKGRIIQGREGKLKGDLEAMAG 464 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEV 233 GR++TG +AK++GL+D +GG E Sbjct: 465 GRVYTGLQAKELGLVDKIGGLREA 488 >gi|319404556|emb|CBI78162.1| protease [Bartonella rochalimae ATCC BAA-1498] Length = 282 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 26/218 (11%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVA 123 A A+ + ++SPGGS IF+ I+ + N K V+T V ++AAS GY+I+CA + I + Sbjct: 57 APAVALVINSPGGSPVQSRLIFQRIRDLANEKNKQVLTFVEDVAASGGYMIACAGDEIFS 116 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 +S+VGSIGV+ F +P L K+GV + + K PF V ++ Sbjct: 117 DPSSIVGSIGVVSASFGFP---ELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKS 173 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + F+ LV E R + G W+G + ++GLID +G V + + Sbjct: 174 LQLEVHQTFIDLVKERRMSKLSDDSNIFTGMFWSGKKGVELGLIDELGDIRSVIKKRF-- 231 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 G + +R I +PPK SLL +PL Sbjct: 232 GDNAKLRLI---SPPK-------------SLLSSKVPL 253 >gi|20092840|ref|NP_618915.1| proteinase IV [Methanosarcina acetivorans C2A] gi|19918143|gb|AAM07395.1| proteinase IV [Methanosarcina acetivorans C2A] Length = 394 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S+E+ E I D++ A+++ ++SPGGS A + I I+K + + PV+ + ++AA Sbjct: 150 SEEISENIHSAVADENVKAIVLRINSPGGSPAAAQEISIEIEKAQEKGIPVVVSMGDLAA 209 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y IS ++ I A ++ GSIGV++ + + + ++ GV KS K S + Sbjct: 210 SAAYYISAPADYIYANPSTSTGSIGVIWTFENMSSYYEREGVEYYISKSGEFKDMGSSWR 269 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + VV SY FV V+E RN+ + L+DGRI+TG +AK++GL+D G Sbjct: 270 GLTDEEKEYADSVVMESYDDFVGQVAEGRNMSRSEVKELADGRIYTGTKAKELGLVDGFG 329 >gi|319784754|ref|YP_004144230.1| peptidase S49 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170642|gb|ADV14180.1| peptidase S49 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 287 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 12/211 (5%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDS--ATALIVSLSSPGGSAYAGEAIFRAIQKV- 93 H +A GQ S L I + S A A+ +S++SPGGS IF+ I+ + Sbjct: 26 HGTIMAGGGQFRPSLSLASTAGLIEKAFSYDAPAVAISINSPGGSPVQSRLIFKRIRDLA 85 Query: 94 --KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKL 148 KNRK V+ V ++AAS GY+I+ A + I A +S+VGSIGV+ F +P + + K+ Sbjct: 86 TEKNRK-VLVFVEDVAASGGYMIAVAGDEIFADPSSIVGSIGVVSASFGFPEL---MKKI 141 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + + KA PF + V+ ++ + + F+ LV E R L Sbjct: 142 GIERRVHTAGQNKAVLDPFKPEKKEDVERLKALQLEVHGTFIDLVKERRGSKLKDDPDLF 201 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G WTG + ++GL+D +G V ++ + Sbjct: 202 TGLFWTGIKGLELGLVDALGDMRTVLKTRFG 232 >gi|184159172|ref|YP_001847511.1| periplasmic serine protease [Acinetobacter baumannii ACICU] gi|332851109|ref|ZP_08433218.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332869618|ref|ZP_08438829.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013113] gi|332875999|ref|ZP_08443785.1| signal peptide peptidase SppA [Acinetobacter baumannii 6014059] gi|183210766|gb|ACC58164.1| Periplasmic serine protease (ClpP class) [Acinetobacter baumannii ACICU] gi|322509086|gb|ADX04540.1| Putative protease [Acinetobacter baumannii 1656-2] gi|332730273|gb|EGJ61598.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332732665|gb|EGJ63897.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013113] gi|332735865|gb|EGJ66906.1| signal peptide peptidase SppA [Acinetobacter baumannii 6014059] Length = 365 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 99 STASSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 158 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 159 QSDEIWQEIRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 218 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S +NP Q +Q V+D+ + F+ V E R Sbjct: 219 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRG 278 Query: 199 IPYDKTLVLSD-----GRIWTGAEAKKVGLIDVVG 228 K L +D G WTG +A ++G+ D G Sbjct: 279 ----KRLKTNDPAIFSGLFWTGEQAIQLGVADRSG 309 >gi|89070172|ref|ZP_01157500.1| peptidase, family S49 [Oceanicola granulosus HTCC2516] gi|89044188|gb|EAR50339.1| peptidase, family S49 [Oceanicola granulosus HTCC2516] Length = 263 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 6/178 (3%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASA 110 L+E+ R D A+ + +SSPGGS I I+++ + + PV+ V ++AAS Sbjct: 38 LLEKAFRAKPD----AVALQISSPGGSPVQSSLIGGRIRRLADERKVPVVAFVEDVAASG 93 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++ A++ I A +S+VGSIGV+ + F+ + G+ + S K+ PF Sbjct: 94 GYWLAAAADEIYADASSVVGSIGVISAGFGAQEFIARHGIERRIHTSGRSKSFLDPFRPE 153 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+ V+ ++ +++ + FV V+ R + L G WTGA AK++GL+D +G Sbjct: 154 KPEDVERLERLLEEIHEHFVAHVTSRRGAKLAEGADLFTGEFWTGARAKELGLVDGIG 211 >gi|319407549|emb|CBI81199.1| protease [Bartonella sp. 1-1C] Length = 282 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 28/218 (12%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVA 123 A ALI++ SPGGS IF+ I+ + N K V+T V ++AAS GY+I+CA + I + Sbjct: 59 AVALIIN--SPGGSPVQSRLIFQRIRDLANEKNKQVLTFVEDVAASGGYMIACAGDEIFS 116 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 +S++GSIGV+ F +P L K+GV + + K PF V ++ Sbjct: 117 DPSSIIGSIGVVSASFGFP---ELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKS 173 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + F+ LV E R + G W+G + ++GLID +G V + + Sbjct: 174 LQLEVHQTFIDLVKERRMSKLSDDSNIFTGMFWSGKKGVELGLIDELGDIRSVIKKRF-- 231 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 G + +R I +PPK SLL +PL Sbjct: 232 GNNAKLRLI---SPPK-------------SLLSSKVPL 253 >gi|146339073|ref|YP_001204121.1| putative serine protease SohB [Bradyrhizobium sp. ORS278] gi|146191879|emb|CAL75884.1| putative serine protease SohB [Bradyrhizobium sp. ORS278] Length = 288 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 3/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER +A A+ + ++SPGGS I+ I+++ K PV+ V ++AAS GY+I Sbjct: 43 LERAFSMRNAKAVALVINSPGGSPVQSRQIYLRIRQLAAEKKLPVLVFVEDVAASGGYMI 102 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I +S+VGSIGV+ ++ + ++G+ + + KA PF NP Sbjct: 103 ACAGDEIFCDPSSIVGSIGVVGGSFGLQDLIKRIGIERRLYTAGEHKAMLDPFLPENPDD 162 Query: 175 VQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V ++ + + F+ LV ESR N +L G W G A +GL D +G V Sbjct: 163 VARLKKIQREIHALFISLVKESRTNRLKGADDLLFTGEYWAGDTAVTLGLADAIGDLRAV 222 Query: 234 WQSLYA 239 ++ + Sbjct: 223 LRARFG 228 >gi|296446060|ref|ZP_06888009.1| peptidase S49 [Methylosinus trichosporium OB3b] gi|296256419|gb|EFH03497.1| peptidase S49 [Methylosinus trichosporium OB3b] Length = 439 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 2/180 (1%) Query: 50 SQELIERIERISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S E E I R + DS +I+ +++PGG + ++ + +RKPV+ V+ AA Sbjct: 96 SYEGFEAIMRAAAVDSRVRGIILDMNTPGGQGAGAMEAGKLVRAIADRKPVVAFVNAQAA 155 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SAGY I+ + I++ + VGSIGV++ + +K G + + KA+ PF+ Sbjct: 156 SAGYAIASGATRIISIPSGSVGSIGVVWMHVDRSAEHEKAGRKVTVLTEGAYKADGHPFA 215 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ A +Q + Y FVR V++ R++P ++ + + R++ G A + GL D VG Sbjct: 216 ALDDGARGRIQSQMRELYDDFVRTVADHRDLP-ERAVRDTQARVYRGDRAVENGLADAVG 274 >gi|328675284|gb|AEB27959.1| Signal peptide peptidase SppA, 36K type [Francisella cf. novicida 3523] Length = 264 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 12/201 (5%) Query: 36 PHVARIAIRGQI-EDSQELIERIERISRDDS-----ATALIVSLSSPGGSAYAGEAIFRA 89 PH+A + + G I ED++ ERI + S DD+ +IV ++SPGGS + I+ Sbjct: 13 PHIALVKVNGIIAEDAEANAERINK-SLDDAYANKAVKGVIVEINSPGGSPVQSDEIYSH 71 Query: 90 IQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q ++++ P I ++ AS GY I+ + I A + ++ GSIGV+ +D Sbjct: 72 MQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGSRFGFTGLMD 131 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 KLG+ + S K PFS + + ++D ++ F+ V +SR DK++ Sbjct: 132 KLGIERRIYTSGKNKDFLDPFSPQKSEQTAQFKKLLDETHQVFIAAVEKSRGDRLKDKSM 191 Query: 206 VLS-DGRIWTGAEAKKVGLID 225 + G ++G +A+++GLID Sbjct: 192 DTTFSGEPFSGIQAQQMGLID 212 >gi|296137880|ref|YP_003645123.1| peptidase S49 [Tsukamurella paurometabola DSM 20162] gi|296026014|gb|ADG76784.1| peptidase S49 [Tsukamurella paurometabola DSM 20162] Length = 306 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNII 121 D A A+ ++L+SPGGS E I I+++ K+ PV+ ++AAS GY ++CA++ I Sbjct: 70 DDAVAVALALNSPGGSPAQSELIGARIRQLAEKHDLPVLAFCEDVAASGGYWLACAADEI 129 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 TS+VGSIGV+ K ++K+G+ + + K F +V V+ + V Sbjct: 130 FVTSTSIVGSIGVISASFGAKDLIEKIGLERRVFTAGESKHRLDMFEDVREADVEWLHGV 189 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F V+E R L G +W GA+A ++GL D VG Sbjct: 190 QGDIHSAFRTWVTERRGARLGDDPALFTGEVWIGAKAVELGLADGVG 236 >gi|71065346|ref|YP_264073.1| signal peptide peptidase [Psychrobacter arcticus 273-4] gi|71038331|gb|AAZ18639.1| probable signal peptide peptidase [Psychrobacter arcticus 273-4] Length = 351 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 31 VEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ N PH+A + I+G I ++ ++ + + R + ++ A+ + ++SPGGS + Sbjct: 87 IDTNKPHLAVVEIQGTISSGDVANAYDVNDALTRAFENSNSKAVALDINSPGGSPVQSDE 146 Query: 86 IFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I++ + ++ + P + + +M AS Y I+ A++ I +SLVGSIGV+ VK Sbjct: 147 IWQTMMDLRKQYPDKKLYAVIGDMGASGAYYIASAADEIYVNPSSLVGSIGVIMPSYNVK 206 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IP 200 +DK+GV +++ + K S + Q ++ V+D+++ F+ V E R + Sbjct: 207 GLMDKVGVEDRTITAGEYKDILSLSRPLTDYEEQHVEKVLDNTHKHFINAVKEGRGDRLK 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + L G WTG ++ ++GL D G Sbjct: 267 NPEQNKLFSGLFWTGEQSIELGLADKKG 294 >gi|254172566|ref|ZP_04879241.1| protease IV [Thermococcus sp. AM4] gi|214033495|gb|EEB74322.1| protease IV [Thermococcus sp. AM4] Length = 329 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%) Query: 38 VARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +A + I G I+ L + +E++ +DDS +++ + SPGG A I+ ++ +K Sbjct: 87 IAVVPIFGVIDGQTALNTVTTLEKLMKDDSVGGVLLWIESPGGDVGAVREIYHEVEVLKA 146 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +KPV+ +AAS GY I+ ++ I+A + VGSIGV++ + + G+ + Sbjct: 147 KKPVVAYTGGIAASGGYYIAVGTDRIIADPLAEVGSIGVIYVHFNLADNYASNGIKVDVF 206 Query: 156 KSSP---MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K+ P M AE +E K + M +D+ + F++ VS R++ ++T + G Sbjct: 207 KTGPHKDMGAEWRALTEYERKKIWGM---IDAYFQSFLQAVSMGRDMTLNETRKYATGET 263 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNY 258 W E L+D G + Q L L GV+ + K+ +P ++Y Sbjct: 264 WLAVEVNGT-LVDETGNFQTAVQELEKLMGVESAEVKVYG-SPTQSY 308 >gi|332559551|ref|ZP_08413873.1| Peptidase S49 [Rhodobacter sphaeroides WS8N] gi|332277263|gb|EGJ22578.1| Peptidase S49 [Rhodobacter sphaeroides WS8N] Length = 250 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 3/198 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE- 102 RG + D Q L IE+ R + + ++SPGGS I I+++ K V Sbjct: 13 RGGLSD-QGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLITARIRRLAFEKGVRVHA 71 Query: 103 -VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++CA + I E+SLVGSIGV+F F+ + G+ + + K Sbjct: 72 FVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFMARNGIERRVHTAGRSK 131 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF P+ V+ ++ + + + F+ V +R D L + +WTG EA ++ Sbjct: 132 SLADPFLPEKPEDVERLKALQEPIHRAFIEHVKRNRGARLDLNADLFNADVWTGQEAVRL 191 Query: 222 GLIDVVGGQEEVWQSLYA 239 GL D V Q +Y Sbjct: 192 GLADGVAHLVPKLQEIYG 209 >gi|183221224|ref|YP_001839220.1| S49 family peptidase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911315|ref|YP_001962870.1| signal peptide peptidase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775991|gb|ABZ94292.1| Signal peptide peptidase (protease IV) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779646|gb|ABZ97944.1| Putative petidase S49, protease IV family [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 544 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 3/185 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+IE + LI ++ + D A+I+ +SSPGGSA+ E I + I ++K KPV Sbjct: 298 GKIE-AFSLIPTLKALGEDKKIKAVILEISSPGGSAFYSEQIHQEILELKKTKPVTAYFK 356 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + AS GY I+ A++ I A+ + GSIG + ++ K ++ ++V P + Sbjct: 357 DTVASGGYYIATAADYITASPVCITGSIGAVSIRANLQKLYKKFHLNKEAVGFYPFRDIH 416 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S F ++ ++V ++ + F + VSE R+IP + + GR++ K+ + Sbjct: 417 SEFQPLSKQSVLYLESQIKKIEGLFYKRVSEGRDIPLKELPNIGMGRVYLPTTENKI--V 474 Query: 225 DVVGG 229 D +GG Sbjct: 475 DSLGG 479 >gi|256112915|ref|ZP_05453828.1| Na(+)/H(+) antiporter 1 / protease IV [Brucella melitensis bv. 3 str. Ether] gi|265994355|ref|ZP_06106912.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 3 str. Ether] gi|262765468|gb|EEZ11257.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 3 str. Ether] Length = 736 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 495 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 554 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 555 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 611 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 612 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 671 Query: 232 EVWQSLYA 239 + Y Sbjct: 672 SFLRKTYG 679 >gi|262198128|ref|YP_003269337.1| signal peptide peptidase SppA, 36K type [Haliangium ochraceum DSM 14365] gi|262081475|gb|ACY17444.1| signal peptide peptidase SppA, 36K type [Haliangium ochraceum DSM 14365] Length = 875 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 94/184 (51%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 ++ S+ L++ I + A+++ + SPGGSA A I R + K + KP++ + Sbjct: 603 RVAGSETLVQAIAWARHNPRIQAIVLRIDSPGGSAVASALIAREVFKTRGVKPIVCSLGN 662 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AAS GY + + I A T++ GSIGV + L +LGVS + + + S Sbjct: 663 AAASGGYYAAAGCDQIFAEATTITGSIGVFSGKFDISGLLTRLGVSWQLYERGAHASMNS 722 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++++ + SY F+ V+ RN+ D+ + GR+WTG +AK VGL+D Sbjct: 723 MLRPFTTEERALLENQLRDSYERFIDTVASGRNMTPDQVDEIGRGRVWTGQQAKAVGLVD 782 Query: 226 VVGG 229 +GG Sbjct: 783 DIGG 786 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 11/212 (5%) Query: 37 HVARIAIRGQIEDSQELIE---RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 + ++A+ G++ D+++L ++ ++RDDS + V ++ P E + A+ ++ Sbjct: 347 RIEQVALAGRL-DTRKLARALVQLRLLARDDSVAGVFVQIADPVEGWAQAEELRGALGEL 405 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + + + Y I+ ++ I + +G+ Y+ L++ GV+ + Sbjct: 406 RRAGKKVYAYLVSGSMRDYFIATGADKIYLDPAGGLDFVGLSATSLYLGEALERAGVAAE 465 Query: 154 SVKSSPMKAEPSPFSEVNPK--AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K K+ P F++ P A++M ++ DS + V ++E+R + D L D Sbjct: 466 FEKIEEYKSAPETFTQDGPSEAALRMRNELYDSVFAELVTRIAEARKLDADTVEALIDEG 525 Query: 212 IWTGAEAKKVG----LIDVVGGQEEVWQSLYA 239 +T AEA + G L+D V E+V ++A Sbjct: 526 PYT-AEALQRGTAALLVDEVVTLEDVGARVFA 556 >gi|294669763|ref|ZP_06734829.1| hypothetical protein NEIELOOT_01663 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308329|gb|EFE49572.1| hypothetical protein NEIELOOT_01663 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 351 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 9/201 (4%) Query: 37 HVARIAIRGQI----EDSQELI-ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I + G I +D E++ + +E + +I+ +SPGGS F ++ Sbjct: 98 HTAVIRLNGVIGGGYQDQVEMLRDGLEAAYANGKVKGIIIRANSPGGSPVISNTAFEEVR 157 Query: 92 KVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K P+ +M AS Y I+ A++ I A +SLVGSIGV+ +DK+ Sbjct: 158 RLKAEHKDIPLYVVTEDMCASGCYYIAAAADKIYADPSSLVGSIGVIGGSFDFTELMDKI 217 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVL 207 GV + + K PFS P+ + Q +++ + F++ V R D + Sbjct: 218 GVKRRLKTAGSNKGMGDPFSPETPEQQAIWQQMLNDIHGEFIKAVKSGRGSRLKDNDPEI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 GR++TG EAKK GLID G Sbjct: 278 FSGRVYTGLEAKKNGLIDDFG 298 >gi|312962571|ref|ZP_07777061.1| peptidase S49, SppA [Pseudomonas fluorescens WH6] gi|311283151|gb|EFQ61742.1| peptidase S49, SppA [Pseudomonas fluorescens WH6] Length = 327 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 12/241 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T +L ++ L + + A I +RG I D + ++ + Sbjct: 41 IFFKLLTFTYLLLMLALFSPLMDMEKSATRGAHYTALIEVRGVIADKEPASADNIVGSLR 100 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 D +I+ ++SPGGS ++ I++++ P I + ++ AS Y I+ Sbjct: 101 AAFEDPKVKGVILRINSPGGSPVQSGYVYDEIRRLRGLHPDIKLYAVISDLGASGAYYIA 160 Query: 116 CASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A++ I A + SLVGSIGV Y +V ++KLGV ++ S KA PF Sbjct: 161 SAADQIYADKASLVGSIGVTAAGYGFVGT-MEKLGVERRTYTSGEHKAFLDPFQPQKADE 219 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q Q V+D+++ F+ V + R + + L G IW+G +A +GLID +G Sbjct: 220 TQFWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLIWSGEQALPLGLIDGLGSASS 279 Query: 233 V 233 V Sbjct: 280 V 280 >gi|193078090|gb|ABO13025.2| putative protease; putative signal peptide peptidase sppA [Acinetobacter baumannii ATCC 17978] Length = 365 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 99 STASSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 158 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 159 QSDEIWQEIRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 218 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S +NP Q +Q V+D+ + F+ V E R Sbjct: 219 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRG 278 Query: 199 IPYDKTLVLSD-----GRIWTGAEAKKVGLIDVVG 228 K L +D G WTG +A ++G+ D G Sbjct: 279 ----KRLKSNDPAIFSGLFWTGEQAIQLGVADRSG 309 >gi|297559382|ref|YP_003678356.1| signal peptide peptidase SppA, 36K type [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843830|gb|ADH65850.1| signal peptide peptidase SppA, 36K type [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 562 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 7/174 (4%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQ-KVKNRKPVITEVHEMAASAGYLISCASNI 120 +D A++ + S GGS A +AI R + K PV+ + ++AAS GY ++ S+ Sbjct: 315 KDPQVKAVVFRVDSRGGSPTASDAIRRETELTSKAGIPVVAVMGDVAASGGYYVTLGSDA 374 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS---SPMKAEPSPFSEVNPKAVQM 177 +VA +L GSIGV+ P + ++ GV+ SV++ + M PF+E + V Sbjct: 375 VVAQPGTLTGSIGVITGKPVLGALKEQYGVTSDSVRTGEHAGMFDTDRPFTESEWERVNA 434 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + +D Y F V+ +R + ++ ++ GR+WTG +A + GL+D +GG E Sbjct: 435 L---LDEIYEDFTGKVAAARGMTREQVHEVARGRVWTGRDAHERGLVDELGGLE 485 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 17/200 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPG-GSAYAGE-----AIFRAIQKVKNRKPVITEVHE 105 +++E I R +RD AL+V + + G A E A FRA K P + Sbjct: 50 DVLEGIRRGARDPRVAALLVRVDARSLGFAKVQELRDTVADFRAAGK-----PAVAWADS 104 Query: 106 MAASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + Y ++CA + +V A T ++G G++ + +VK LDKL VS + K Sbjct: 105 FGETGEGNLPYYLACAFSRVVMAPTGVLGLTGLMMRTTFVKGALDKLDVSYEVGARHEYK 164 Query: 162 AEPSPFSEVNPKAVQ--MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 + +E A Q +V S V VS +R +P ++ L + EA Sbjct: 165 NAMNSVTETGYTAAQREASDRIVTSLGDQIVEAVSLARGLPREEVRALVSKGPFLAREAV 224 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 + L+D + ++EV+ L+ Sbjct: 225 EHKLVDGLAHRDEVYAQLFG 244 >gi|331233637|ref|XP_003329479.1| protease IV [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308469|gb|EFP85060.1| protease IV [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 563 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 9/186 (4%) Query: 37 HVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 +V + + G I D E +++ + + DDS A+++ + S GG + I+ A++ Sbjct: 120 NVGVVYVLGTIGDMGEFGTSAIVKGLHEAADDDSIGAVVLRIDSGGGGVVESDTIWGAVK 179 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP-FLDKLG 149 +K + K VI AAS GYLI+ ++ I A+++++ GSIGV P V FLD+L Sbjct: 180 ALKAKGKVVIASFGNAAASGGYLIATHADSIFASQSTITGSIGVASLRPTVTTSFLDRLK 239 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 ++ +S + S + E+ + ++ + +DS+YH F V E RNI + VL+ Sbjct: 240 LTTQSFFTGSNAL--SLYHELEGEQMERHKAHIDSAYHDFKERVCEGRNISPELIEVLAG 297 Query: 210 GRIWTG 215 GR++TG Sbjct: 298 GRVYTG 303 >gi|260556527|ref|ZP_05828745.1| periplasmic serine protease [Acinetobacter baumannii ATCC 19606] gi|260409786|gb|EEX03086.1| periplasmic serine protease [Acinetobacter baumannii ATCC 19606] Length = 365 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 99 STASSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 158 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 159 QSDEIWQEIRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 218 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S +NP Q +Q V+D+ + F+ V E R Sbjct: 219 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRG 278 Query: 199 IPYDKTLVLSD-----GRIWTGAEAKKVGLIDVVG 228 K L +D G WTG +A ++G+ D G Sbjct: 279 ----KRLKSNDPAIFSGLFWTGEQAIQLGVADRSG 309 >gi|240103706|ref|YP_002960015.1| Signal peptide peptidase SppA (sppA) [Thermococcus gammatolerans EJ3] gi|239911260|gb|ACS34151.1| Signal peptide peptidase SppA (sppA) [Thermococcus gammatolerans EJ3] Length = 329 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 12/224 (5%) Query: 38 VARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +A + I G IE L + +E++ +DDS +++ + SPGG A I+ +Q ++ Sbjct: 87 IALVPIFGVIEGQTALNTVTTLEKLMKDDSVGGVLLWIESPGGDVGAVREIYHEVQVLRA 146 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +KPV+ +AAS GY I+ + I+A + VGSIGV++ + + G+ + Sbjct: 147 KKPVVAYTGGIAASGGYYIAVGAERIIADPLAEVGSIGVIYVHFNLADNYASNGIKVDVF 206 Query: 156 KSSP---MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K+ P M AE +E K + M +D+ + F++ VS RN+ ++T + G Sbjct: 207 KTGPHKDMGAEWRALTEYERKKIWGM---IDAYFQSFLQAVSMGRNMTLNETREYATGET 263 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPP 255 W + L+D G + + L L GV+ + +IK + P Sbjct: 264 WLAIKVNGT-LVDETGNFQTAVEELEKLMGVESA--EIKVYGSP 304 >gi|90423538|ref|YP_531908.1| peptidase S49 [Rhodopseudomonas palustris BisB18] gi|90105552|gb|ABD87589.1| peptidase S49 [Rhodopseudomonas palustris BisB18] Length = 262 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%) Query: 38 VARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 VA + +RG+I S Q+L+ + +++ + A ALI++L + GG+ E I + + Sbjct: 17 VAVLRLRGEIAVSSAMIQDLLNVLPQLTPQEHA-ALIITLETAGGTLTCAENIMGWVDHL 75 Query: 94 KNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 R PVI + E SAG I+ + ++A ++++G+ GV+ +P +LG+ Sbjct: 76 YRRLSCPVIAVIEERCLSAGLAIAACCDHVIAQPSAMIGAFGVMMTWPGENRLRAQLGLL 135 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K++ +K SP + + V+ + F L+ + R I + + DGR Sbjct: 136 ATVYKTTALKDFGSPHRAPTAEDDAAIHSVLQDIHGQFAELIRDRRGIGGGEIDEIFDGR 195 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + TG A ++GL+D +GG E Q L A GV Sbjct: 196 LITGRRALEIGLVDQLGGFETALQWLNANGV 226 >gi|167523164|ref|XP_001745919.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775720|gb|EDQ89343.1| predicted protein [Monosiga brevicollis MX1] Length = 1557 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 15/178 (8%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ + S GGSA A + I R + ++ KPV+ +AAS GY IS ++ IVA S Sbjct: 354 AVVLRVDSSGGSALASDLIAREVARLAAVKPVVASFGTLAASGGYYISALAHTIVADPMS 413 Query: 128 LVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVN-------PKAVQMMQ 179 + GSIGV P + +D +GV + +EP P + VN P+ + Sbjct: 414 ITGSIGVAMLRPNGQKLIDDMMGVRHHLI------SEPGPLARVNDFYAPMSPEVRAYLD 467 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQS 236 + YH F+++V + R + ++ + G++++ +A++ GL+D +G Q+ V Q+ Sbjct: 468 KRSEEVYHAFLKIVCQGRGMSLEEAEKHAKGQVFSAEQAQQRGLVDQLGSLQDAVDQA 525 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EV 170 L+ A+ A ++ V G F+ KPFL KLG+ +++V+S K F+ +V Sbjct: 149 LVGAAAERFFAPSSASVNLHGFSFRVSAYKPFLQKLGLDVEAVRSGEFKGIVDTFAADDV 208 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSE 195 NP VQ M D++ + +S+ Sbjct: 209 NPAVVQNMGDLLRGMTKSYTERLSQ 233 >gi|89898686|ref|YP_515796.1| periplasmic serine proteases IV [Chlamydophila felis Fe/C-56] gi|89332058|dbj|BAE81651.1| periplasmic serine proteases IV [Chlamydophila felis Fe/C-56] Length = 338 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 ++ H ARI Q+ I ++ D +I+ + PGG + + IQ Sbjct: 80 SAKHTARIL--------QDAITTLDSAPYKDRVKGIIIDMDCPGGEVFEIARTYSVIQFW 131 Query: 94 KNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLG 149 K R P+ V+ + AS GY ++CA++ I + +SL+GS+GVL PY VK L + G Sbjct: 132 KQRTNCPIYVFVNGLCASGGYYVACAADKIYSTSSSLIGSVGVL-SGPYFNVKEGLSRYG 190 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLS 208 V + + KA +P++E K ++ Q+V++ Y FV +V +R + DK + + Sbjct: 191 VQSDLLTAGKDKAPMNPYTEWTTKDREIRQEVINYLYGQFVDVVVTNRPLLTKDKLVSVL 250 Query: 209 DGRIWTGAEAKKVGLIDVVG-GQEEVWQSL 237 R+++ +A + G +DVV +++V Q L Sbjct: 251 GARLYSPEKALEEGYVDVVNVTKQQVIQDL 280 >gi|146174461|ref|XP_001019379.2| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila] gi|146144797|gb|EAR99134.2| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila SB210] Length = 255 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 11/213 (5%) Query: 36 PHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 P V + I GQI + EL + ++ I R +A AL V ++SPGGS + + I Sbjct: 11 PTVPVVTINGQITEKSVIELEKNLKDI-RVSTAKALAVVVNSPGGSPTQSKKMVDLIHNF 69 Query: 94 --KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 N V T ++AASAG+ + + + + A + S +GSIG + + VK + G+ Sbjct: 70 AHDNHLTVYTFAEDLAASAGFQVLISGDKVFADQQSTLGSIGSITNFMNVKELILNQGIE 129 Query: 152 IKSVKSSPMK-AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN----IPYDKT-L 205 I+SV ++P S F +V + + ++++ S + F+ LV E R +P +K Sbjct: 130 IRSVTTNPASVTNQSMFKDVPEELRHVYENMLQSQHKKFIDLVEEQRGSKIKVPKEKRGS 189 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 +L +G ++ G +A + GLID +G ++V + + Sbjct: 190 LLYNGDVFNGKQALEYGLIDSIGRVQDVMKEEF 222 >gi|239501011|ref|ZP_04660321.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB900] Length = 338 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 STASSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S +NP Q +Q V+D+ + F+ V E R Sbjct: 192 YGITGLAQKLGIEDRTLTAGANKDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRG 251 Query: 199 IPYDKTLVLSD-----GRIWTGAEAKKVGLIDVVG 228 K L +D G WTG +A ++G+ D G Sbjct: 252 ----KRLKTNDPAIFSGLFWTGEQAIQLGVADRSG 282 >gi|169632699|ref|YP_001706435.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii SDF] gi|169795044|ref|YP_001712837.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii AYE] gi|213158294|ref|YP_002320345.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB0057] gi|215482593|ref|YP_002324785.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB307-0294] gi|301348285|ref|ZP_07229026.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB056] gi|301512406|ref|ZP_07237643.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB058] gi|301596270|ref|ZP_07241278.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB059] gi|169147971|emb|CAM85834.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii AYE] gi|169151491|emb|CAP00252.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii] gi|213057454|gb|ACJ42356.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB0057] gi|213987631|gb|ACJ57930.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB307-0294] gi|323519116|gb|ADX93497.1| periplasmic serine protease (ClpP class) [Acinetobacter baumannii TCDC-AB0715] Length = 338 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 22/241 (9%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 STASSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S +NP Q +Q V+D+ + F+ V E R Sbjct: 192 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRG 251 Query: 199 IPYDKTLVLSD-----GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 K L +D G WTG +A ++G+ D G + + L +D + + N Sbjct: 252 ----KRLKTNDPAIFSGLFWTGEQAIQLGVADRSG---NITSLMRELKLDNKVDYTIERN 304 Query: 254 P 254 P Sbjct: 305 P 305 >gi|157803850|ref|YP_001492399.1| protease sohB [Rickettsia canadensis str. McKiel] gi|157785113|gb|ABV73614.1| possible protease sohB [Rickettsia canadensis str. McKiel] Length = 304 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 6/196 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + K+ Sbjct: 119 DMAASGGYWLACSGDRIYALSSSIIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKSVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++++ Y FV + R + +L +G W G A GL Sbjct: 179 DPFQPINKDDLKIIKNLQKQVYEHFVDYIKTRRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVGGQEEVWQSLYA 239 ID +G V + + Sbjct: 239 IDGIGDMYSVMKQKFG 254 >gi|307109943|gb|EFN58180.1| hypothetical protein CHLNCDRAFT_142011 [Chlorella variabilis] Length = 479 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 4/166 (2%) Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E IF I+++ PV T ++AAS GY + CA + A ETSLVGS+GV+ Sbjct: 216 GSPVQSELIFGLIRRLSKSTGIPVYTFAEDVAASGGYWLMCAGDKSYALETSLVGSVGVI 275 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 KLGV + + K + PF V P ++D++D + F V Sbjct: 276 SATFGATEAAKKLGVERRVFTAGEAKMQLDPFLPVQPDQEARLRDIMDDLHQAFKERVRG 335 Query: 196 SRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 SR + + L GR WTG +A K+GL+D +G V Q + Sbjct: 336 SRGERLAAGRDDELFSGRAWTGRQALKLGLVDGLGDMRSVMQEQFG 381 >gi|91784726|ref|YP_559932.1| family S49 unassigned peptidase [Burkholderia xenovorans LB400] gi|91688680|gb|ABE31880.1| Family S49 unassigned peptidase [Burkholderia xenovorans LB400] Length = 334 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 12/243 (4%) Query: 7 KIKTRYVMLSLVTLTV---VYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERI-- 60 +I R+V L ++ L + + FS V H A + + G+I D+ E I Sbjct: 50 RIFFRFVFLVILLLAIWAAIDFS-GDKVAATGRHTAMVTLDGEISADTNANAEDINTALE 108 Query: 61 -SRDDSATA-LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 + DD+ TA +I+ +SPGGS I+ I++++ + P + V +M AS GY + Sbjct: 109 SAFDDAGTAGVILRCNSPGGSPVQAGIIYDEIRRLRAKYPSVPLYAVVGDMCASGGYYAA 168 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLG+ + S K PFS PK Sbjct: 169 AAADKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFFDPFSPETPKMD 228 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + QD++D + F+ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 229 EHAQDMLDQIHAQFIDAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGFGDTDYVAR 288 Query: 236 SLY 238 L+ Sbjct: 289 DLF 291 >gi|254471707|ref|ZP_05085108.1| serine protease [Pseudovibrio sp. JE062] gi|211958909|gb|EEA94108.1| serine protease [Pseudovibrio sp. JE062] Length = 286 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 2/165 (1%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS IF+ I+++ +N K V+ V ++AAS GY+I+ A + I+ Sbjct: 57 APAVALSINSPGGSPVQSHLIFKRIRQLADENNKQVLVFVEDVAASGGYMIALAGDDIIV 116 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S++GSIGV+ L+K GV + S K PF+ + ++ ++ + Sbjct: 117 DPASIIGSIGVVSAGFGFTELLEKAGVQRRVYTSGEKKVTLDPFAPEVKEDIEHLKTLQH 176 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ +V R L G WTGA+A+ +GL+D +G Sbjct: 177 EIHEMFIDMVKSRRGDVLSDDDNLFSGLFWTGAKARDLGLVDGLG 221 >gi|17987818|ref|NP_540452.1| Na(+)/H(+) antiporter 1 / protease IV [Brucella melitensis bv. 1 str. 16M] gi|17983545|gb|AAL52716.1| na(+)/h(+) antiporter 1 / protease iv [Brucella melitensis bv. 1 str. 16M] Length = 763 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ + +++K V V ++AAS GY+I Sbjct: 522 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAAEHQKKVFVFVEDVAASGGYMI 581 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 582 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 638 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 639 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 698 Query: 232 EVWQSLYA 239 + Y Sbjct: 699 SFLRKTYG 706 >gi|297247797|ref|ZP_06931515.1| NhaA family Na+:H+ antiporter [Brucella abortus bv. 5 str. B3196] gi|297174966|gb|EFH34313.1| NhaA family Na+:H+ antiporter [Brucella abortus bv. 5 str. B3196] Length = 763 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 522 LEKAFADKHAPAVAISINSPGGAPVQLRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 581 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + K PF Sbjct: 582 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERHVYTAGSNKVTLDPFQPEK 638 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 639 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 698 Query: 232 EVWQSLYA 239 + Y Sbjct: 699 SFLRKTYG 706 >gi|225851933|ref|YP_002732166.1| Na+/H+ antiporter NhaA [Brucella melitensis ATCC 23457] gi|225640298|gb|ACO00212.1| Na+/H+ antiporter NhaA [Brucella melitensis ATCC 23457] Length = 763 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG I+R I+ V+++K V V ++AAS GY+I Sbjct: 522 LEKAFADKHAPAVAISINSPGGVPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 581 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 582 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 638 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 639 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 698 Query: 232 EVWQSLYA 239 + Y Sbjct: 699 SFLRKTYG 706 >gi|82702195|ref|YP_411761.1| peptidase S49 [Nitrosospira multiformis ATCC 25196] gi|82410260|gb|ABB74369.1| Peptidase S49 [Nitrosospira multiformis ATCC 25196] Length = 316 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 114/232 (49%), Gaps = 13/232 (5%) Query: 15 LSLVTLTVVYF---SW--SSHVEDNSPHVARIAIRG-----QIEDSQELIERIERISRDD 64 L+ + L ++ F W S + + H A + +RG I ++ + +++ +D Sbjct: 40 LTFIWLFILLFFGLGWFGDSSMSISGKHTALVDLRGVISPDSISSAENITAGLQQAFKDA 99 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLISCASNII 121 +I+ ++SPGGS I I++++ P I V ++ AS GY ++ A++ I Sbjct: 100 KTQGVILRINSPGGSPVQAGYINDEIRRLRAEYPEIPLYAVVEDICASGGYYVAVAADKI 159 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 + S++GSIGVL ++KLG+ + + + KA PFS N + + + + Sbjct: 160 YVDKASIIGSIGVLINGFGFTKAMEKLGIERRLITAGENKAFLDPFSPNNREQEEYAKKM 219 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + F+++V + R + + G++WTG ++ ++GL D +G E V Sbjct: 220 LGDIHEQFIQVVQQGRGERLKEKPEIFSGKVWTGQKSVELGLADGMGSAEYV 271 >gi|126740611|ref|ZP_01756298.1| peptidase, family S49 [Roseobacter sp. SK209-2-6] gi|126718412|gb|EBA15127.1| peptidase, family S49 [Roseobacter sp. SK209-2-6] Length = 265 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 3/187 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + D+ L +ER A+ + ++SPGGS I IQ++ K PVI Sbjct: 28 RGSLSDAA-LAPVLERAFSKGKPAAVALEINSPGGSPVQSSLIGARIQRLAKEKNVPVIA 86 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ +++ I A +S+VGSIGV+ L++ G+ + + K Sbjct: 87 FVEDVAASGGYWLAASADEIWADASSVVGSIGVISAGFGAHELLNRHGIERRVYTAGESK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF NP+ V ++ +++ + F+ V+E R D + L G +W A + Sbjct: 147 SMLDPFRAENPEDVTRLKGLLEDIHQNFIDHVTERRGDKLDGSHKLFTGEVWLARRAVDL 206 Query: 222 GLIDVVG 228 GLID +G Sbjct: 207 GLIDGIG 213 >gi|296158253|ref|ZP_06841085.1| peptidase S49 [Burkholderia sp. Ch1-1] gi|295891589|gb|EFG71375.1| peptidase S49 [Burkholderia sp. Ch1-1] Length = 334 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 8/210 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A +A+ G+I +++++ +E D +I+ +SPGGS I+ I+ Sbjct: 82 HTAMVALDGEISADTNANAEDISTALESAFDDAGTAGVILRCNSPGGSPVQAGIIYNEIR 141 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + P I V +M AS GY + A++ I + S+VGSIGVL +DKL Sbjct: 142 RLRAKYPSIPLYVVVGDMCASGGYYAAAAADKIYVDKASIVGSIGVLMDSFGFTGLMDKL 201 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + S K PFS PK + QD++D + F+ V E R +T + Sbjct: 202 GIQRRLHTSGENKGFFDPFSPETPKMDEHAQDMLDQIHAQFIDAVREGRGKRLHETPDMF 261 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 G WTG ++ ++GL D G + V + L+ Sbjct: 262 SGLFWTGQKSVELGLADGFGDADYVARDLF 291 >gi|257064987|ref|YP_003144659.1| signal peptide peptidase SppA, 36K type [Slackia heliotrinireducens DSM 20476] gi|256792640|gb|ACV23310.1| signal peptide peptidase SppA, 36K type [Slackia heliotrinireducens DSM 20476] Length = 382 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 8/210 (3%) Query: 38 VARIAIRGQIE-----DSQE-LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 VA I I G I+ +S E L + + + DD+ A+++ ++S GG+A AGE + + Sbjct: 121 VAVIDIDGTIQYDGTTNSPEGLRDVLTQAEEDDNIKAIVLHVNSGGGTATAGEEMSLLVA 180 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 KPV+ + ASA Y+IS S+ I T+ +GSIG + Q V ++KLGV Sbjct: 181 DC--TKPVVVSSASINASAAYMISSQSDYIFVNHTTAIGSIGTVMQTYDVSELMEKLGVD 238 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + ++ S+ K + + + QD+VD F+ LVSE R + + L+ G Sbjct: 239 VINIASAESKDSSYGTRPLTDEEIAYYQDLVDKINAQFIGLVSEGRGMDVSEVQALATGM 298 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +TG +A GL D VG ++ LG Sbjct: 299 EFTGDDAVDNGLADEVGTYDDALAKAAELG 328 >gi|77460384|ref|YP_349891.1| peptidase S49, SppA [Pseudomonas fluorescens Pf0-1] gi|77384387|gb|ABA75900.1| putative peptidase [Pseudomonas fluorescens Pf0-1] Length = 329 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 13/233 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSA 66 Y+ ++L+ T + S + + A I + G I D + ++ + D Sbjct: 52 YLFVALILFTPLMDMEKSATRSGN-YTALIDVTGMIADKEPASADNIVGSLRAAFEDKKV 110 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 +I+ ++SPGGS ++ I++++ P + + ++ AS Y I+ A++ I A Sbjct: 111 KGVILRINSPGGSPVQSGYVYDEIKRLRGLHPDTKLYAVISDLGASGAYYIASAADQIYA 170 Query: 124 AETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + SLVGSIGV Y +V ++KLGV ++ S KA PF P+ Q V+ Sbjct: 171 DKASLVGSIGVTAAGYGFVGT-MEKLGVERRTYTSGEHKAFLDPFQPQKPEETAFWQSVL 229 Query: 183 DSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 D+++ F+ V + R + + L G +W+G +A +GLID +G V Sbjct: 230 DTTHKQFINSVKQGRGDRLKDKEHPELFSGLVWSGEQALPLGLIDGLGNASSV 282 >gi|260563474|ref|ZP_05833960.1| Na+/H+ antiporter nhaA [Brucella melitensis bv. 1 str. 16M] gi|265990527|ref|ZP_06103084.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 1 str. Rev.1] gi|260153490|gb|EEW88582.1| Na+/H+ antiporter nhaA [Brucella melitensis bv. 1 str. 16M] gi|263001311|gb|EEZ13886.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 1 str. Rev.1] Length = 723 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ + +++K V V ++AAS GY+I Sbjct: 482 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAAEHQKKVFVFVEDVAASGGYMI 541 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 542 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 598 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 599 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 658 Query: 232 EVWQSLYA 239 + Y Sbjct: 659 SFLRKTYG 666 >gi|299769100|ref|YP_003731126.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. DR1] gi|298699188|gb|ADI89753.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. DR1] Length = 338 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 16/238 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S V +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 SAVSSSSAHLAVVDIIGTIDASSNQSVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S ++P Q +Q V+D+ + F+ V E R Sbjct: 192 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPIDPVQKQHIQSVLDNVHTHFITAVKEGRG 251 Query: 199 --IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + + + S G WTG +A ++G+ D G + + L +D + + NP Sbjct: 252 KRLKSNDPAIFS-GLFWTGEQAIQLGVADRSG---NITSLMRELNLDNKVDYTIERNP 305 >gi|241203318|ref|YP_002974414.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857208|gb|ACS54875.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 286 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS IF I+++ + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAIAISINSPGGSPVQSRLIFTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF K ++ ++ Sbjct: 118 DATSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R + G W+G ++GLID +G + + Y Sbjct: 175 LQLEIHQVFISMVRERRASKLRDDATVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG 233 >gi|302878040|ref|YP_003846604.1| peptidase S49 [Gallionella capsiferriformans ES-2] gi|302580829|gb|ADL54840.1| peptidase S49 [Gallionella capsiferriformans ES-2] Length = 313 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 8/238 (3%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + ++ + + +F S H A + ++G I LI ++ Sbjct: 30 IFFKVLTFGYLFVILFVLMGWFDKSETALSTGKHTALVDMQGVIAADSAASADNLIPGLQ 89 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 +D +I+ ++SPGGS I I++++ + P I V ++ AS GY ++ Sbjct: 90 AAFKDKGTQGVILRINSPGGSPVQAGQINDEIRRLRVKYPAIPLYVVVEDICASGGYYVA 149 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + SL+GSIGVL ++KLGV + V + K PFS V P Sbjct: 150 AAADKIFVDKASLIGSIGVLMDGFGFTGTMEKLGVERRLVTAGSNKGFMDPFSAVRPDQQ 209 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + ++ + F+ +V + R +T G +W G ++GL D G E V Sbjct: 210 EYAKQMLAQIHQQFIDVVKQGRGKRLKETPDTFSGLVWNGQAGIEMGLADGYGSVESV 267 >gi|157964478|ref|YP_001499302.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] gi|157844254|gb|ABV84755.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] Length = 304 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 6/196 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E ELIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNELIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAKENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + K+ Sbjct: 119 DMAASGGYWLACSGDRIYALPSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKSVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++++ Y F+ V R + +L +G W G A GL Sbjct: 179 DPFKPINKDDLKIIKNLQKQVYEHFIEYVKTRRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVGGQEEVWQSLYA 239 ID +G V + + Sbjct: 239 IDGIGDMYSVMKEKFG 254 >gi|85714241|ref|ZP_01045229.1| peptidase S49 [Nitrobacter sp. Nb-311A] gi|85698688|gb|EAQ36557.1| peptidase S49 [Nitrobacter sp. Nb-311A] Length = 306 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 3/175 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER D+A A+ + ++SPGGS I+ I+++ K PV+ V ++AAS GY+I Sbjct: 65 LERAFAVDNAKAVALVVNSPGGSPVQSRQIYLRIRQLSREKEIPVLVFVEDVAASGGYMI 124 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I +S++GSIGV+ + K+GV + + KA PF NP Sbjct: 125 ACAGDEIFCDPSSIMGSIGVVGGSFGFTELMRKIGVERRLYTAGEHKATLDPFLPENPDD 184 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVG 228 V ++ + + F+ LV SR T +L G W G + +GL D +G Sbjct: 185 VARLKAIQREIHATFIELVKASRGERLKGTDDLLFTGEYWAGERSVALGLADAIG 239 >gi|260883200|ref|ZP_05894814.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 9 str. C68] gi|260872728|gb|EEX79797.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 9 str. C68] Length = 723 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 482 LEKAFADKHAPAVAISINSPGGAPVQLRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 541 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + K PF Sbjct: 542 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERHVYTAGSNKVTLDPFQPEK 598 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 599 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 658 Query: 232 EVWQSLYA 239 + Y Sbjct: 659 SFLRKTYG 666 >gi|256044114|ref|ZP_05447025.1| Na(+)/H(+) antiporter 1 / protease IV [Brucella melitensis bv. 1 str. Rev.1] gi|189029205|sp|Q8YFI5|NHAA_BRUME RecName: Full=Na(+)/H(+) antiporter nhaA; AltName: Full=Sodium/proton antiporter nhaA Length = 736 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ + +++K V V ++AAS GY+I Sbjct: 495 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAAEHQKKVFVFVEDVAASGGYMI 554 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 555 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 611 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 612 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 671 Query: 232 EVWQSLYA 239 + Y Sbjct: 672 SFLRKTYG 679 >gi|325123108|gb|ADY82631.1| putative protease [Acinetobacter calcoaceticus PHEA-2] Length = 338 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S V +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 SAVSSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAVALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S ++P Q +Q V+D+ + F+ V E R Sbjct: 192 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPIDPAQKQHIQSVLDNVHTHFITAVKEGRG 251 Query: 199 --IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + S G WTG +A ++G+ D G Sbjct: 252 KRLKSNDPAIFS-GLFWTGEQAIQLGVADRSG 282 >gi|46445858|ref|YP_007223.1| putative proteinase IV [Candidatus Protochlamydia amoebophila UWE25] gi|46399499|emb|CAF22948.1| putative proteinase IV [Candidatus Protochlamydia amoebophila UWE25] Length = 345 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 6/200 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR--AIQKVKNRKPVITEVHEMAA 108 Q+LIE E +++ AL++ +++PGG+ + IF+ A K K + PV + + A Sbjct: 92 QQLIESREGAYKNNRVKALLLYINTPGGTVADADGIFQLLADYKKKYQVPVYAYIDGLCA 151 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S G I+ A++ I A++ SL+GS+GV+ + V LDKLGV ++ + K +P Sbjct: 152 SGGMYIALAADKIYASDISLIGSVGVIAPTFMNVTKLLDKLGVETLTISAGKDKDAMNPL 211 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDV 226 P + ++D Y FV LVS R + LV G ++ A + G IDV Sbjct: 212 RPWKPGEEDNYRQIIDYYYTHFVDLVSSHRPALSKEKLVKDYGAHVFPAPNAVEKGYIDV 271 Query: 227 VGG--QEEVWQSLYALGVDQ 244 G E + + L +G+D Sbjct: 272 SGATISETLKELLMTIGIDN 291 >gi|256256945|ref|ZP_05462481.1| Clp protease [Brucella abortus bv. 9 str. C68] Length = 736 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 495 LEKAFADKHAPAVAISINSPGGAPVQLRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 554 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + K PF Sbjct: 555 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERHVYTAGSNKVTLDPFQPEK 611 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 612 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMR 671 Query: 232 EVWQSLYA 239 + Y Sbjct: 672 SFLRKTYG 679 >gi|265999603|ref|ZP_05467088.2| Na(+)/H(+) antiporter nhaA [Brucella melitensis bv. 2 str. 63/9] gi|263094920|gb|EEZ18628.1| Na(+)/H(+) antiporter nhaA [Brucella melitensis bv. 2 str. 63/9] Length = 723 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG I+R I+ V+++K V V ++AAS GY+I Sbjct: 482 LEKAFADKHAPAVAISINSPGGVPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 541 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 542 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 598 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 599 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 658 Query: 232 EVWQSLYA 239 + Y Sbjct: 659 SFLRKTYG 666 >gi|126642643|ref|YP_001085627.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter baumannii ATCC 17978] Length = 338 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 STASSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S +NP Q +Q V+D+ + F+ V E R Sbjct: 192 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRG 251 Query: 199 --IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + S G WTG +A ++G+ D G Sbjct: 252 KRLKSNDPAIFS-GLFWTGEQAIQLGVADRSG 282 >gi|326408432|gb|ADZ65497.1| Na+/H+ antiporter NhaA [Brucella melitensis M28] gi|326538147|gb|ADZ86362.1| Na+/H+ antiporter NhaA [Brucella melitensis M5-90] Length = 736 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG I+R I+ V+++K V V ++AAS GY+I Sbjct: 495 LEKAFADKHAPAVAISINSPGGVPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 554 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 555 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 611 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 612 AEDIERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDML 671 Query: 232 EVWQSLYA 239 + Y Sbjct: 672 SFLRKTYG 679 >gi|242239357|ref|YP_002987538.1| periplasmic protease [Dickeya dadantii Ech703] gi|242131414|gb|ACS85716.1| Peptidase S49 domain protein [Dickeya dadantii Ech703] Length = 348 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 102/190 (53%), Gaps = 5/190 (2%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EV 103 G++ +E I + ++R + +++ L SPGG + +Q+++ + +T V Sbjct: 114 GEVSSLREEISAVLAVARPEDE--VLLRLESPGGVVHGYGLAASQLQRLRQKGIRLTVTV 171 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY+++C ++ IVAA +++GSIGV+ Q P FL + ++ + K Sbjct: 172 DKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPNFNRFLKNKDIDVELHTAGQFKRT 231 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + F E + ++ ++ ++ F + VS+ R P ++ G W G++AK++GL Sbjct: 232 LTLFGENTDTGREKFREELNETHELFKQFVSQMR--PSLDIEAVATGEHWFGSQAKELGL 289 Query: 224 IDVVGGQEEV 233 +DV+G +++ Sbjct: 290 VDVIGTSDDL 299 >gi|254461803|ref|ZP_05075219.1| peptidase, family S49 [Rhodobacterales bacterium HTCC2083] gi|206678392|gb|EDZ42879.1| peptidase, family S49 [Rhodobacteraceae bacterium HTCC2083] Length = 265 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 3/186 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVIT 101 RG + D Q L +++ A+ + ++SPGGS I I+++ +N PVI Sbjct: 28 RGALND-QSLAPVLDKAFTRGKPDAVALQINSPGGSPVQSSLIGARIRRLADENEIPVIA 86 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ A++ I A E+S++GSIGV+ FL K G+ + + K Sbjct: 87 FVEDVAASGGYWLAAAADEIYADESSVLGSIGVISAGFGAHVFLAKQGIERRVYTAGKSK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF+ + V ++ +++ + F+R V + R DK L G IW G AK V Sbjct: 147 SMMDPFTPETEEDVARVKGMLEQIHTNFIRYVQKRRGEKLDKGSELFTGDIWIGDVAKDV 206 Query: 222 GLIDVV 227 GLID + Sbjct: 207 GLIDGI 212 >gi|41615105|ref|NP_963603.1| hypothetical protein NEQ315 [Nanoarchaeum equitans Kin4-M] gi|40068829|gb|AAR39164.1| NEQ315 [Nanoarchaeum equitans Kin4-M] Length = 256 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 4/167 (2%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGG A E +R I+ + K I+ + + SA Y I+ +N I A E Sbjct: 64 AIVLYIDSPGG---APEPTYRIIKYLDRINKTKISYIAQYGTSASYWIATHTNKIFANEL 120 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S VGS+GVL + L KLGV S K +P ++ Q ++ D Y Sbjct: 121 SFVGSVGVLIGKIDLSGLLSKLGVKYYSFSKGKYKEFSNPLLPLDNYTKQYYNELADKLY 180 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++F+ V E R+I + + + I+ G EAKK GLID +G ++V Sbjct: 181 NFFLTDVLEHRDIKKECLSKVKESTIFLGIEAKKCGLIDYIGTMDDV 227 >gi|197121609|ref|YP_002133560.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] gi|196171458|gb|ACG72431.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] Length = 834 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 1/161 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFR-AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + S GG A + I+R A++ + KPVI + ++AAS GYL++ ++ I+A ++ Sbjct: 590 IVLRIESGGGDGLASDLIWREAVRARRKGKPVIASMGDLAASGGYLVAVGADAILAERST 649 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIGV P + L KL + ++ + S P +++ + + Y Sbjct: 650 LTGSIGVFAAKPDLSGLLAKLSIHPEAYQRGENARLVSVLKPWTPAERAVLEKQIGAFYR 709 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 FV V+E R + + ++ GR+WTG +A + L+D +G Sbjct: 710 QFVARVAEGRRLTTAEVEAVAGGRVWTGQQALERKLVDRIG 750 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 9/180 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAAS 109 L+ R+E D AL+V + GG + G E + + V+ RKPV+ + Sbjct: 328 LVTRLEAARDDPEVGALLVRI---GGLSLGGGRVEELRALLAAVRARKPVLAYLEGGGTR 384 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK--AEPSPF 167 +L + A+ I L+ + G+ +++ L +LG++ VK+ K AEP Sbjct: 385 EYWLATAATAIAAPPGAPLIVN-GISTSQLFLRGGLARLGIAFDVVKAGAYKSAAEPLVR 443 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +P+A + + V+D + FV V+E+R +P ++ L D ++T EAK+ GL+D V Sbjct: 444 DAPSPEAREATEAVLDDVFGRFVAQVAEARRLPPERVRALVDQGLFTAEEAKEAGLVDAV 503 >gi|220916373|ref|YP_002491677.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] gi|219954227|gb|ACL64611.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] Length = 834 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 1/161 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFR-AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + S GG A + I+R A++ + KPVI + ++AAS GYL++ ++ I+A ++ Sbjct: 590 IVLRIESGGGDGLASDLIWREAVRARRKGKPVIASMGDLAASGGYLVAVGADAILAERST 649 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIGV P + L KL + ++ + S P +++ V + Y Sbjct: 650 LTGSIGVFAAKPDLSGLLAKLSIHPEAYQRGENARLVSVLKPWTPAERAVLEKQVGAFYR 709 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 FV V+E R + + ++ GR+WTG +A + L+D +G Sbjct: 710 QFVARVAEGRRLTTAEVEAVAGGRVWTGQQALERRLVDRIG 750 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 9/180 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAAS 109 L+ R+E D AL+V + GG + G E + + V+ RKPV+ + E + Sbjct: 328 LVTRLEAARDDPEVGALLVRI---GGLSLGGGRVEELRALLAAVRARKPVLAYL-EGGGT 383 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK--AEPSPF 167 Y ++ + I A + + G+ +++ L +LG++ VK+ K AEP Sbjct: 384 REYWLATGATAIAAPPGAPLIVNGISTSQLFLRGGLARLGIAFDVVKAGAYKSAAEPLVR 443 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +P+A + + V+D + FV V+E+R +P ++ L D ++T EAK GL+D V Sbjct: 444 DAPSPEAREATEAVLDDVFGRFVAQVAEARRLPPERVRALVDQGLFTAEEAKDAGLVDAV 503 >gi|167739953|ref|ZP_02412727.1| peptidase S49 [Burkholderia pseudomallei 14] Length = 316 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 1/176 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DD+ +++ + SPGGS Y + I + + RKP+ + +AAS Y I+ A++ Sbjct: 93 DDAVGGIVLDVDSPGGSVYGVTELADEIYRSRARKPIFAVANSLAASGAYWIASAASEFY 152 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 VG IGV + + L K G+ + + K E +PF + A MQ V Sbjct: 153 VTPGGEVGDIGVHDIHVDLSKGLQKAGIETTLIAAGKYKTEGNPFHPLGADARAAMQKRV 212 Query: 183 DSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D+ Y FV V++ RN+P + GR+ AK+ ++D V +EV L Sbjct: 213 DAYYRAFVAAVAKHRNVPESAVRNGMGQGRLLDAERAKRESMVDGVATLDEVIDGL 268 >gi|146311850|ref|YP_001176924.1| putative periplasmic protease [Enterobacter sp. 638] gi|145318726|gb|ABP60873.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Enterobacter sp. 638] Length = 347 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 94/175 (53%), Gaps = 5/175 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C ++ IVA Sbjct: 131 SQDQVVLRLESPGGVVHGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVADKIVA 190 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P FL + I+ + K + E + Q ++ ++ Sbjct: 191 APFAILGSIGVVAQIPNFNRFLKNKEIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLN 250 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++H F V R ++ D+ ++ G W G +A++ GL+D VG +++ SL Sbjct: 251 ETHHLFKDFVHRMRPSLDIDQ---VATGEHWYGIQAQEKGLVDEVGTSDDLLLSL 302 >gi|34580537|ref|ZP_00142017.1| possible protease sohB [Rickettsia sibirica 246] gi|157828421|ref|YP_001494663.1| protease sohB [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933133|ref|YP_001649922.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] gi|229586670|ref|YP_002845171.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] gi|238650916|ref|YP_002916772.1| signal peptide peptidase [Rickettsia peacockii str. Rustic] gi|28261922|gb|EAA25426.1| possible protease sohB [Rickettsia sibirica 246] gi|157800902|gb|ABV76155.1| possible protease sohB [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908220|gb|ABY72516.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] gi|228021720|gb|ACP53428.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] gi|238625014|gb|ACR47720.1| signal peptide peptidase [Rickettsia peacockii str. Rustic] Length = 304 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 6/196 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E LIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNALIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAEENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + K+ Sbjct: 119 DMAASGGYWLACSGDRIYALPSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKSVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++D+ Y F+ V R + +L +G W G A GL Sbjct: 179 DPFKPINKDDLKIIKDLQKQVYEHFIEYVKTRRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVGGQEEVWQSLYA 239 ID +G V + + Sbjct: 239 IDGIGDMYSVMKEKFG 254 >gi|293390340|ref|ZP_06634674.1| S49 family peptidase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950874|gb|EFE00993.1| S49 family peptidase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 352 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 E+ P + + +G I S+ L E I I + T ++V L SPGG + Sbjct: 100 EERKPTLYVLHFKGDISASETAALREEISAIIQVAKPTDEVLVCLESPGGVVHGYGLAAS 159 Query: 89 AIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K R +T V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLMRLKQRNIRLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLV 206 V + + + K + F E K Q Q ++ ++ F R V+++R ++ DK Sbjct: 220 HDVDVDVMTAGEYKRTMTIFGENTEKGKQKFQQELEETHQLFKRFVAQNRPHLDLDK--- 276 Query: 207 LSDGRIWTGAEAKKVGLID 225 ++ G W G +A + L+D Sbjct: 277 VATGEHWFGQQALNLNLVD 295 >gi|288549698|ref|ZP_05967891.2| SohB protein, peptidase U7 family [Enterobacter cancerogenus ATCC 35316] gi|288317953|gb|EFC56891.1| SohB protein, peptidase U7 family [Enterobacter cancerogenus ATCC 35316] Length = 351 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q+++ ++ P+ V ++AAS GY+++C ++ IVAA S Sbjct: 139 VVVRLESPGGVVHGYGLAASQLQRLREKQIPLTVAVDKVAASGGYMMACVADKIVAAPFS 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 199 IIGSIGVVAQIPNFNRFLKNKEIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHH 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A++ GL+D VG +++ +L Sbjct: 259 LFKDFVHRMR--PTLDIDSVATGEHWYGIQAQEKGLVDDVGTSDDLLLNL 306 >gi|260460358|ref|ZP_05808610.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] gi|259034003|gb|EEW35262.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] Length = 287 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV---KNRKPVITEVHEMAASAGYLISCASNIIV 122 A A+ +S++SPGGS IF+ I+ + KN+K V+ V ++AAS GY+I+ A + I Sbjct: 57 APAVAISINSPGGSPVQSRLIFKRIRDLATEKNKK-VLVFVEDVAASGGYMIAVAGDEIF 115 Query: 123 AAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 A +S+VGSIGV+ F +P + + K+GV + + KA PF + V+ ++ Sbjct: 116 ADPSSIVGSIGVVSASFGFPEL---MKKIGVERRVHTAGQNKAVLDPFKPEKKEDVERLK 172 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ LV E R L G WTG + ++GL+D + V ++ + Sbjct: 173 ALQLEVHETFIDLVKERRGTKLKDDPDLFTGLFWTGKKGLELGLVDALSDMRTVLKTRFG 232 >gi|226952101|ref|ZP_03822565.1| possible signal peptide peptidase SppA [Acinetobacter sp. ATCC 27244] gi|226837157|gb|EEH69540.1| possible signal peptide peptidase SppA [Acinetobacter sp. ATCC 27244] Length = 340 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 27/268 (10%) Query: 37 HVARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 H+A + I G I+ +S + + ++R + A+ ++++SPGGS + I++ Sbjct: 81 HLAVVDIIGTIDSSSGSSTVNSDDTNKALKRAFEASGSKAVALNINSPGGSPVQSDEIWQ 140 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ + Sbjct: 141 EIRYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYGLSGLA 200 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 KLG+ +++ S K S ++P Q +Q V+D+ + F+ V E R + + Sbjct: 201 QKLGIEDRTLTSGSNKDILSMTKPLDPAQKQHVQSVLDNVHAHFINAVKEGRGKRLKSND 260 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + S G WTG +A +G+ D G S+ L D ++ + D+ +N + L Sbjct: 261 PAIFS-GLFWTGEQAVALGVADRSG-------SMTTLMRDLNVSQKVDYTVQRNPFESIL 312 Query: 264 KNL------SISSLLEDTIPLMKQTKVQ 285 + ISS L D + + K+Q Sbjct: 313 GRMGAKIGEGISSSLADQLQTQQNAKIQ 340 >gi|83644957|ref|YP_433392.1| periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] gi|83633000|gb|ABC28967.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 329 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 16/219 (7%) Query: 15 LSLVTLTVVYFSWSSHVEDN-----SPHVARIAIRGQIEDSQE-----LIERIERISRDD 64 L+ + L + + S V N PH A I + G I S+E ++ + ++ Sbjct: 50 LTFLYLFFIVIALSPGVGKNVAARTEPHTAVIEVNGVIAASEEANADAIVSALRDAFEEE 109 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNII 121 SA A+I+ ++SPGGS ++ I ++K P V + ++ AS Y I+ A++ I Sbjct: 110 SAKAVILRINSPGGSPVQAGYVYDEIGRLKGEYPDKKVYAVIMDIGASGAYYIAAAADEI 169 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A + SLVGSIGV +DKLGV + + K+ PF V ++ Q V Sbjct: 170 YADKASLVGSIGVTASGFGFVDAMDKLGVERRIFTAGEHKSFLDPFVPVKEDERELWQGV 229 Query: 182 VDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEA 218 +++++ F+ V + R I D L+ S G IW+G +A Sbjct: 230 LNTTHKQFIEQVEKGRGDRIHKDNPLLYS-GMIWSGEQA 267 >gi|15807090|ref|NP_295819.1| endopeptidase IV-like protein [Deinococcus radiodurans R1] gi|6459892|gb|AAF11646.1|AE002045_6 endopeptidase IV-related protein [Deinococcus radiodurans R1] Length = 556 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 100/181 (55%), Gaps = 7/181 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S ++ ++ D + A++V ++S GGSA A + ++R I + KPV+ + E AAS Sbjct: 313 SDTVVAALKHAKEDKATKAIVVYVNSGGGSALASDLMWREI--ATSDKPVVVVMGEYAAS 370 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV-KSSPMKAEPS-PF 167 GY ++ ++ IVA+ +L GSIGV+ P ++ F + G+ + V + + PS P+ Sbjct: 371 GGYYLATHADKIVASPYTLTGSIGVVSGKPVMQEFNGRQGLKPERVGRDRALMYSPSRPY 430 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ + ++ + Y F V+E R++ ++ + GRIW+G +A ++GL+D + Sbjct: 431 TD---EERAHIEKGIGEVYDRFTSRVAEGRDLSQERVNEIGRGRIWSGYDALELGLVDEL 487 Query: 228 G 228 G Sbjct: 488 G 488 >gi|237739508|ref|ZP_04569989.1| protease IV [Fusobacterium sp. 2_1_31] gi|229423116|gb|EEO38163.1| protease IV [Fusobacterium sp. 2_1_31] Length = 588 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 23/232 (9%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPG 77 ++D+ V I + G I +SQ E I ++ + A+++ ++SPG Sbjct: 308 LDDSDNIVYVIPLEGDIVESQTEIFSGEANINVNETIAKLNTAKENKKIKAVVLRVNSPG 367 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA + I ++++ + KPV + +AAS GY IS +N I ++ GS+GV+ Sbjct: 368 GSALTSDIIAEKVKELASEKPVYVSMSSVAASGGYYISANANKIYVDRNTVTGSVGVVSV 427 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS---YHWFVRLVS 194 L GV+++ + + E S V+ + + +S+ Y F+ +VS Sbjct: 428 LVDYSSLLKDNGVNVEKIS----EGEYSDLYSVDTFTEKKYNKIYNSNLKVYEDFLNVVS 483 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + R I +K L++GR+WTG EA K GL D +GG ++ ++YA+ D +I Sbjct: 484 KGRKIDKEKLKELAEGRVWTGTEAVKNGLADEIGG---LYSTIYAITDDNNI 532 >gi|15892468|ref|NP_360182.1| protease sohB [Rickettsia conorii str. Malish 7] gi|15619624|gb|AAL03083.1| possible protease sohB [Rickettsia conorii str. Malish 7] Length = 304 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 6/185 (3%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVH 104 +E LIE+ +I + AL + ++SPGGS E I + I+ + +N+ + + + Sbjct: 62 LESLNALIEKAFKIKK---LKALCLIINSPGGSPVQSELIAKRIRDLAEENKIKIYSFIE 118 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GY ++C+ + I A +S++GSIGV+ ++KLG+ + K+ Sbjct: 119 DMAASGGYWLACSGDRIYALPSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKSVL 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGL 223 PF +N +++++D+ Y F+ V R + +L +G W G A GL Sbjct: 179 DPFKPINKDDLKIIKDLQKQVYEHFIEYVKTRRAGKLTQQDEILFNGEFWAGQTALDYGL 238 Query: 224 IDVVG 228 ID +G Sbjct: 239 IDGIG 243 >gi|294651086|ref|ZP_06728423.1| signal peptide peptidase SppA [Acinetobacter haemolyticus ATCC 19194] gi|292823035|gb|EFF81901.1| signal peptide peptidase SppA [Acinetobacter haemolyticus ATCC 19194] Length = 340 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 27/268 (10%) Query: 37 HVARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 H+A + I G I+ +S + + ++R + A+ ++++SPGGS + I++ Sbjct: 81 HLAVVDIIGTIDSSSGSSTVNSDDTNKALKRAFEASGSKAVALNINSPGGSPVQSDEIWQ 140 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ + Sbjct: 141 EIRYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYDLSGLA 200 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 KLG+ +++ S K S ++P Q +Q V+D+ + F+ V E R + + Sbjct: 201 QKLGIEDRTLTSGSNKDILSMTKPLDPAQKQHVQSVLDNVHAHFINAVKEGRGKRLKSND 260 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + S G WTG +A +G+ D G S+ L D ++ + D+ +N + L Sbjct: 261 PAIFS-GLFWTGEQAVALGVADRSG-------SMTTLMRDLNVSQKVDYTVQRNPFESIL 312 Query: 264 KNL------SISSLLEDTIPLMKQTKVQ 285 + ISS L D + + K+Q Sbjct: 313 GRMGAKIGEGISSSLADQLQTQQNAKIQ 340 >gi|294675947|ref|YP_003576562.1| S49 family peptidase [Rhodobacter capsulatus SB 1003] gi|294474767|gb|ADE84155.1| peptidase, S49 family [Rhodobacter capsulatus SB 1003] Length = 275 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 20/265 (7%) Query: 36 PHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAY--AGE 84 P VA + ++G I S+ L E +ER R A+ + ++SPGGS + Sbjct: 16 PRVAVVRLQGAIGISRPGAPGLSDAALAETLERAFRKGKPVAVALIINSPGGSPVQSSLI 75 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 A + PV + ++AAS GY ++CA++ I A TS+VGSIGV+ Sbjct: 76 AARIRALAAETGLPVHAFIEDVAASGGYWLACAADDIWADATSIVGSIGVISSGFGFADL 135 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + + GV + + K+ PF P+ V + +++ + F V++ R Sbjct: 136 IGRYGVERRVHTAGGSKSFLDPFRPEKPEDVDRLTRLLEDMHRAFKAWVTDRRGAKLAAG 195 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G IWTGA+A + GLID + ++LY V K+ + P +++ L+ Sbjct: 196 ADLFTGEIWTGAQALETGLIDGLAHPGPKLRALYGDKV-----KLVPYGPRRSW----LR 246 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWA 289 S E + +++ + + LWA Sbjct: 247 RFGASMAAEAAVSVLEAAEERALWA 271 >gi|254428540|ref|ZP_05042247.1| Peptidase family S49 N-terminal [Alcanivorax sp. DG881] gi|196194709|gb|EDX89668.1| Peptidase family S49 N-terminal [Alcanivorax sp. DG881] Length = 345 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 96/177 (54%), Gaps = 8/177 (4%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASN 119 S+DD ++V L SPGG ++ +++++N+ +T V ++AAS GY+++C ++ Sbjct: 127 SQDDE---VLVRLESPGGLVHSYGLASSQLRRIRNQGIKLTIAVDQVAASGGYMMACIAD 183 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVAA +++GSIGV+ Q P L K + ++ + + K + E K Q Sbjct: 184 RIVAAPFAIIGSIGVVAQIPNFHRLLKKNDIDVELMTAGEYKRTMTMLGENTEKGRAKFQ 243 Query: 180 DVVDSSYHWFVRLVSES-RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ ++ F V ++ R + DK ++ G W G +AK++GL+D + +E+ Q Sbjct: 244 EELEDTHQLFKGFVRDNRRGLDLDK---VATGEHWFGTQAKELGLVDEIMTSDELLQ 297 >gi|21226968|ref|NP_632890.1| periplasmic serine protease [Methanosarcina mazei Go1] gi|20905282|gb|AAM30562.1| Periplasmic serine protease [Methanosarcina mazei Go1] Length = 410 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 1/180 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S+E+ + I D++ A+++ ++S GGS A + I I+K + + PVI + ++AA Sbjct: 165 SEEICQNIHSAVEDNNVRAIVLRVNSGGGSPSAAQEIAIEIEKAQKQGVPVIVSMGDLAA 224 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y IS ++ I A ++ GSIGV++ + + F G++ KS K + Sbjct: 225 SAAYYISAPADYIFANPSTNTGSIGVIWTFENMSGFYQNEGINYYVSKSGEFKDMGGTWR 284 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + +VV SY FV V+E RNI + L+DGRI+TG+ AK +GL+D G Sbjct: 285 GLTDEEKEYADEVVMESYEEFVTQVAEGRNISRSEVKKLADGRIYTGSRAKDLGLVDDFG 344 >gi|49475218|ref|YP_033259.1| protease sohB [Bartonella henselae str. Houston-1] gi|49238023|emb|CAF27229.1| Protease sohB [Bartonella henselae str. Houston-1] Length = 283 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 28/261 (10%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS-------- 65 M++ + + + +SS E + + + G I DS I R + R + Sbjct: 1 MVNFIKNFIPHRFYSSKTE-----IPVVRLHGAIIDSSSSIARTLSLGRCANLLDKAFAY 55 Query: 66 --ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNII 121 A A+ V ++SPGGS IF+ I+ + + +K V+ + ++AAS GY+I+CA + I Sbjct: 56 KKAPAVAVIINSPGGSPVQSRLIFKRIRDLAEEKKKQVLMFIEDIAASGGYMIACAGDEI 115 Query: 122 VAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 A +S+VGSIGV+ F +P + L K+G+ + + K PF ++ + Sbjct: 116 FADPSSIVGSIGVVSASFGFPEL---LKKIGIERRVYTAGKNKVTLDPFQPEKKTDIEHL 172 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + + + F+ LV E R + G W+G ++ ++GLID + V + + Sbjct: 173 KSLQLEVHKTFIDLVKERRAEKLSNDPNIFTGMFWSGKKSVELGLIDGLNDVRSVIKERF 232 Query: 239 ALGVDQSIRKIKDWNPPKNYW 259 G D +R I PPK+ + Sbjct: 233 --GDDTKLRLII---PPKSLF 248 >gi|86356525|ref|YP_468417.1| protease protein [Rhizobium etli CFN 42] gi|86280627|gb|ABC89690.1| protease protein [Rhizobium etli CFN 42] Length = 286 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS IF I+++ + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAISINSPGGSPVQSRLIFTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF K ++ ++ Sbjct: 118 DATSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R + G W+G ++GLID +G + + Y Sbjct: 175 LQLEIHQVFIAMVRERRAGKLTDDATVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG 233 >gi|241667507|ref|ZP_04755085.1| S49 family peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876053|ref|ZP_05248763.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842074|gb|EET20488.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 307 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 12/202 (5%) Query: 35 SPHVARIAIRGQI-EDSQELIERIERISRDDSAT-----ALIVSLSSPGGSAYAGEAIFR 88 + H+ + + G I ED++ ERI + S DD+ + +I+ ++SPGGS + I+ Sbjct: 55 TSHIGLVKVDGVIVEDAEANAERINK-SLDDAYSNKAVKGIIIEINSPGGSPVQSDEIYS 113 Query: 89 AIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++ ++ + P I + AS GY I+ + I A + ++VGSIGV+ + Sbjct: 114 HMRYLQQKYPNIPMYAVCTNVCASGGYYIAAGAKEIYANKMTIVGSIGVIGSGFGFTGLM 173 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKT 204 DKLG+ ++ S K PFS P+ ++D ++ F+ V +SR DK Sbjct: 174 DKLGIERRTYTSGSNKDFLDPFSPERPEQTAQFNKLLDETHQVFITAVEQSRGDRLKDKA 233 Query: 205 LVLS-DGRIWTGAEAKKVGLID 225 + + G ++G +A+++GLID Sbjct: 234 MDTTFSGEPFSGIQAQRMGLID 255 >gi|27377645|ref|NP_769174.1| proteinase [Bradyrhizobium japonicum USDA 110] gi|27350790|dbj|BAC47799.1| proteinase [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER +A A+ + ++SPGGS I+ I+++ K PV+ V ++AAS GY+I Sbjct: 60 LERAFSMRNAKAVALVINSPGGSPVQSRQIYLRIKQLAAEKKLPVLVFVEDVAASGGYMI 119 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I +S++GSIGV+ + + +LG+ + + KA PF NP Sbjct: 120 ACAGDEIFCDPSSILGSIGVVGGSFGFQDAIKRLGIERRLYTAGAHKAMLDPFLPENPDD 179 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY---DKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 V ++ + + F+ LV ESR D TL G W GA + +GL D +G Sbjct: 180 VAKLKALQREIHQIFIALVRESRGARLKGEDDTLF--TGEYWAGASSIALGLADGIGDLR 237 Query: 232 EVWQSLYA 239 ++ Y Sbjct: 238 STLRARYG 245 >gi|311279820|ref|YP_003942051.1| Peptidase S49 domain-containing protein [Enterobacter cloacae SCF1] gi|308749015|gb|ADO48767.1| Peptidase S49 domain protein [Enterobacter cloacae SCF1] Length = 347 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C N IV A + Sbjct: 135 VVLRLESPGGVVHGYGLAASQLQRLRDKQVPLTIAVDKVAASGGYMMACVGNKIVCAPFA 194 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 195 IIGSIGVVAQIPNFNRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHH 254 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G++AK+ GL+D +G +++ L Sbjct: 255 LFKDFVHSMR--PQLDIEQVATGEHWYGSQAKEKGLVDDIGTSDDLLLGL 302 >gi|189184683|ref|YP_001938468.1| SohB protease [Orientia tsutsugamushi str. Ikeda] gi|189181454|dbj|BAG41234.1| SohB protease [Orientia tsutsugamushi str. Ikeda] Length = 305 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 7/188 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IE+ TA+ + ++SPGGS E I I ++ N+K PV + V ++AAS GY + Sbjct: 70 IEKAFSFKKLTAVCLVVNSPGGSPVQSELIASRILQLSNQKNVPVYSFVEDVAASGGYWL 129 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA I A+++S++GSIGV++ + + KLG+ + S K+ PF Sbjct: 130 ACAGKKIYASKSSIIGSIGVIYMGFGLHEAIGKLGIKRRVYTSGNNKSILDPFMPEKDSD 189 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++++Q++ ++ F+ + R DK V+ +G W+G +A + GLID + Sbjct: 190 IKIIQNLQKKIHNHFISYIKSRRGDKITQEDK--VIYNGEFWSGEQALEYGLIDGINDMY 247 Query: 232 EVWQSLYA 239 + Y Sbjct: 248 SFLNTKYG 255 >gi|293609877|ref|ZP_06692179.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828329|gb|EFF86692.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 338 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 16/238 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S V +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 SAVSSSSAHLAVVDIIGTIDASSNQAVNSEDTNKALKRAFEASNSKAVALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKQHPDKKVYAVIGDMGASGTYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S ++P Q +Q V+D+ + F+ V E R Sbjct: 192 YGITGLAQKLGIEDRTLTAGTNKDILSMTKPIDPVQKQHIQSVLDNVHTHFITAVKEGRG 251 Query: 199 --IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + + + S G WTG +A ++G+ D G + + L +D + + NP Sbjct: 252 KRLKSNDPAIFS-GLFWTGEQAIQLGVADRSG---NITSLMRELNLDNKVDYTIERNP 305 >gi|163732838|ref|ZP_02140283.1| peptidase, family S49, putative [Roseobacter litoralis Och 149] gi|161394198|gb|EDQ18522.1| peptidase, family S49, putative [Roseobacter litoralis Och 149] Length = 265 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 7/191 (3%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PV 99 A RG + D + L IE+ A+ + ++SPGGS I I+++ K PV Sbjct: 26 AGRGTLND-ESLAPAIEKAFSRGKPAAVALEVNSPGGSPVQSSLIGARIRRLAEEKGIPV 84 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 I V ++AAS GY ++ A++ I + E+S+VGSIGV+ L + G+ + + Sbjct: 85 IAFVEDVAASGGYWLAAAADEIYSDESSVVGSIGVISASFGAHELLARQGIERRVYTAGK 144 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAE 217 K+ PF NP+ V ++ +++ + F VS R+ +P D+ L G +W G Sbjct: 145 SKSMLDPFRPENPEDVARLKGLLEDIHGNFKDHVSARRSGKLPEDRDLFT--GEVWLGRR 202 Query: 218 AKKVGLIDVVG 228 A ++GLID +G Sbjct: 203 AAELGLIDGIG 213 >gi|116250715|ref|YP_766553.1| peptidase [Rhizobium leguminosarum bv. viciae 3841] gi|115255363|emb|CAK06438.1| putative peptidase [Rhizobium leguminosarum bv. viciae 3841] Length = 286 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS IF I+++ + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAISINSPGGSPVQSRLIFTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF K ++ ++ Sbjct: 118 DATSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R + G W+G ++GLID +G + + Y Sbjct: 175 LQLEIHQVFISMVRERRAGKLRDDAAVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG 233 >gi|262278137|ref|ZP_06055922.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] gi|262258488|gb|EEY77221.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] Length = 338 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S V +S H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS Sbjct: 72 SAVSSSSAHLAVVDIIGTIDASSNQSVNSEDTNKALKRAFEASNSKAVALNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+ +++ + K S ++P Q +Q V+D+ + F+ V E R Sbjct: 192 YGISGLAQKLGIEDRTLTAGTNKDILSMTKPIDPVQKQHIQSVLDNVHTHFITAVKEGRG 251 Query: 199 --IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + S G WTG +A ++G+ D G Sbjct: 252 KRLKSNDPAIFS-GLFWTGDQAIQLGVADRSG 282 >gi|29839895|ref|NP_829001.1| protease IV, putative [Chlamydophila caviae GPIC] gi|29834242|gb|AAP04879.1| protease IV, putative [Chlamydophila caviae GPIC] Length = 332 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 7/195 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAA 108 QE I ++ LI+ + PGG + ++ I+ K + PV V+ + A Sbjct: 83 QEAIIALDSAPYKGRVKGLIIDMDCPGGEVFEIARVYSTIKFWKQCTKCPVYVFVNGLCA 142 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKSVKSSPMKAEPSP 166 S GY ++CA++ I + +SL+GS+GVL PY VK L + GV + S KA +P Sbjct: 143 SGGYYVACAADKIYSTSSSLIGSVGVL-SGPYFNVKEGLSRHGVQSDLLISGKDKAPMNP 201 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLID 225 ++E K ++ Q+++D Y FV +V +R + + LV G R+++ +A + G ID Sbjct: 202 YTEWTAKDREIRQEIIDYLYGQFVDIVVTNRPLLTKEKLVGVLGARLYSPEKALETGYID 261 Query: 226 VVGG-QEEVWQSLYA 239 VV +++V + L A Sbjct: 262 VVNATKQQVLEDLVA 276 >gi|328873642|gb|EGG22009.1| hypothetical protein DFA_01898 [Dictyostelium fasciculatum] Length = 650 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 15/178 (8%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D + A+++ ++SPGGS A + I I+ K K V+ + + AAS GY I+C ++ I Sbjct: 351 DKNIKAIVLVVNSPGGSYIASDLIHHEIELAKKAGKKVVVHMGQFAASGGYFIACNADRI 410 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK-----------SSPMKAEPSPFSEV 170 VA ++ GSIGVL KP +K+GV+ + +S + P+++V Sbjct: 411 VALPGTITGSIGVLAGKFNTKPMWEKIGVTYDMINLNNNDKHGDNDNSTFYSALHPYNKV 470 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 A M D +D Y F V+ R + + ++ GR+WTG +A L+D +G Sbjct: 471 QRDA---MNDFLDYIYGDFTSKVAAGRTLTAAQVEDVARGRVWTGNQALDRKLVDKIG 525 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 18/199 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYA-----GEAIFRAIQKVKNRKPVITEVHEM 106 ++I I S D ALI LS + A +AI K K+ E+ Sbjct: 83 DIINYINHASGDAKVKALICRLSDKAHLSLAMIQELRQAILNFRAKGKHTVVYSESFGEL 142 Query: 107 AASAG-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + S G Y ++ A N I + VG + ++K LDKLG++ + K K+ Sbjct: 143 SNSIGSYYLATAFNEIYIPQCGAVGLVSFSSDQSFIKKTLDKLGITAEFFKRKEYKSAAD 202 Query: 166 PFSE-----VNPKAVQ-MMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEA 218 P +E N +++ ++ D+++ Y +++ RN+ D+ L ++S+G ++ +A Sbjct: 203 PLTEEKLTDSNRESLTALLGDILNQMYQG----IAKERNLGMDQLLNIISNGP-YSSNKA 257 Query: 219 KKVGLIDVVGGQEEVWQSL 237 ++ L++ E ++ L Sbjct: 258 VELNLVNGTKYLNETYEHL 276 >gi|124265853|ref|YP_001019857.1| putative protease transmembrane protein [Methylibium petroleiphilum PM1] gi|124258628|gb|ABM93622.1| putative protease transmembrane protein [Methylibium petroleiphilum PM1] Length = 336 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 14/232 (6%) Query: 34 NSPHVARIAIRGQIED----SQELIERIERISRDDS-ATALIVSLSSPGGSAYAGEAIFR 88 + PH A I IRG+I S E I R + +D+ A A+++ ++SPGGS + Sbjct: 84 SGPHTALIEIRGEIAAEALASAEGINAALRTAFEDAGAQAVVLRINSPGGSPVQAGLVTD 143 Query: 89 AIQKVKN---RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K K + E+ ASA Y I+ ++ I + S+VGSIGVL + Sbjct: 144 EIRRLKGLHADKKLYAVCEELCASAAYYIAAVADEIFVDKASIVGSIGVLMDGFGFTGTM 203 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLGV + + + K PFS ++ Q +V+ + F+++V + R + Sbjct: 204 EKLGVERRLITAGDNKGLLDPFSPLSEAHKAYAQAMVNQIHQQFIKVVKDGRGARLKEAP 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 G W+G A + GL D +G + V + + ++ D+ P +N Sbjct: 264 ETFSGLFWSGESAVQQGLADRLGSLDYVAREVV------KAEEVIDYTPKEN 309 >gi|270159903|ref|ZP_06188559.1| S49 family peptidase [Legionella longbeachae D-4968] gi|289165342|ref|YP_003455480.1| inner membrane peptidase [Legionella longbeachae NSW150] gi|269988242|gb|EEZ94497.1| S49 family peptidase [Legionella longbeachae D-4968] gi|288858515|emb|CBJ12396.1| putative inner membrane peptidase [Legionella longbeachae NSW150] Length = 312 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 21/235 (8%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERI-----SRDDSATALIVSLSSPGGSAYAGEA 85 + P + I G I+ SQ +L E I + RD+ ++V L SPGG + Sbjct: 73 EEQPTLYVIDFHGDIKASQVEQLREEINALLCTATPRDE----VLVRLDSPGGIVNSYGL 128 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q++++R P+ + +MAAS GYL++C +N ++AA +++GSIGV+ Q P + Sbjct: 129 AASQLQRIRDRNIPLTVSIDKMAASGGYLMACVANQVIAAPFAIIGSIGVVAQIPNFHRW 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDK 203 L K + ++ + + K + F E K + QD ++ + F V+ +R+ + DK Sbjct: 189 LKKHDIDVELLTAGEYKRTLTLFGENTEKGREKAQDDLEKIHAAFRNYVAANRDQLDIDK 248 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +S G W +A + LID + ++ Y L S + K PPK + Sbjct: 249 ---VSTGEHWLAKDAFDLKLIDKLCTSDD-----YLLEKISSYKAFKLTVPPKTF 295 >gi|148284091|ref|YP_001248181.1| periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] gi|146739530|emb|CAM79252.1| Periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] Length = 305 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 93/174 (53%), Gaps = 7/174 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IE+ TA+ + ++SPGGS E I I ++ N+K PV + V ++AAS GY + Sbjct: 70 IEKAFSFKKLTAVCLVVNSPGGSPVQSELIASRILQLSNQKNVPVYSFVEDVAASGGYWL 129 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA I A+++S++GSIGV++ + + KLG+ + S K+ PF Sbjct: 130 ACAGKKIYASKSSIIGSIGVIYMGFGLHEAIGKLGIKRRVYTSGNNKSILDPFMPEKDSD 189 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++Q++ ++ F+ + R DK V+ +G W+G +A + GLID Sbjct: 190 IKIIQNLQKKIHNHFISYIKSRRGDKITQEDK--VIYNGEFWSGEQALEYGLID 241 >gi|126668129|ref|ZP_01739091.1| peptidase, putative [Marinobacter sp. ELB17] gi|126627399|gb|EAZ98034.1| peptidase, putative [Marinobacter sp. ELB17] Length = 341 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 8/200 (4%) Query: 37 HVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I + G ++ + ++ + + A A+I+ ++SPGGS ++ I+ Sbjct: 90 HTAVIGVDGPIAADELASADNIVSSLRAAFVEPDAAAVILRINSPGGSPVQSGYVYDEIK 149 Query: 92 KVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ P V + ++ AS Y I+ A++ I A SLVGSIGV+ + KL Sbjct: 150 RLRTEYPDKKVYAVISDIGASGAYYIASAADEIYANRASLVGSIGVVAGGFGFTEVMGKL 209 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + K PFS P+ V Q V+++++ F+ V + R + Sbjct: 210 GVERRLYTAGESKGFLDPFSAEKPEEVAFWQSVLENTHGQFIAAVQQGRGDRLADDPRVF 269 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 G IW+G +A ++GLID +G Sbjct: 270 SGLIWSGEQALELGLIDGLG 289 >gi|298293861|ref|YP_003695800.1| peptidase S49 [Starkeya novella DSM 506] gi|296930372|gb|ADH91181.1| peptidase S49 [Starkeya novella DSM 506] Length = 298 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 9/189 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER A A+ + ++SPGG+ +++ I+ + K PVI V ++AAS GY++ Sbjct: 57 LERAFAVKGAKAVALIINSPGGAPAQSHLVYKRIRALAEEKELPVIAFVEDVAASGGYML 116 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +CA++ IVA S+VGSIGV+ F +P L+KLG+ + + K PF Sbjct: 117 ACAADEIVADVFSIVGSIGVVSAGFGFPRA---LEKLGIDRRVYTAGERKVMLDPFQPEK 173 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ ++ + + FV LV + R ++ + L G W +A+ +GL+D +G Sbjct: 174 EEDIERLKALQQEIHAAFVDLVKQRRGDVLSAEDSTLFSGEFWAAPQAQGLGLVDSIGDM 233 Query: 231 EEVWQSLYA 239 ++ Y Sbjct: 234 RSFLRARYG 242 >gi|78187485|ref|YP_375528.1| protease IV [Chlorobium luteolum DSM 273] gi|78167387|gb|ABB24485.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium luteolum DSM 273] Length = 583 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 88/192 (45%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 IE +D A+++ + SPGG A A + + KP++ + +AAS GY+ + Sbjct: 318 IEGALKDRRVKAMVLRIDSPGGDALASAEMLEMLDSAAVCKPLVVSMSGVAASGGYMAAL 377 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + I A S+ GSIGV P + + K+G+ V S + ++ +A + Sbjct: 378 SGRSIYAEPLSITGSIGVYALKPEISGLVQKIGLGRSIVTRGRNADANSIYKPLDGEAYR 437 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + Y FV V+ +R + + L+ GR+WTG A +VGL+D GG + Sbjct: 438 KFVEASGEVYRDFVGKVARARKMSPGRVDSLAGGRVWTGRRALEVGLVDRSGGLFDALGE 497 Query: 237 LYALGVDQSIRK 248 LG S R+ Sbjct: 498 AQRLGGIDSTRQ 509 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 5/181 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAAS 109 Q+L+ + S D A+++ + + + RAI++ + + K VI +H S Sbjct: 58 QDLLFTLHHASSDPRVDAVLLDIDGVRTTPSKISELRRAIERTRASGKRVIAFLHSPEDS 117 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 ++ A + ++ E + G+ + Y L K+GVS ++ + K+ PF Sbjct: 118 D-CMLGAACDSVIVEEGGFMLLDGLRAETLYFATPLRKIGVSFQAAQWKRYKSGIEPFVR 176 Query: 170 V--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDV 226 +P+A + + ++D Y ++ VS R++ D + D + T EA ++GL D Sbjct: 177 TGPSPEAEEEVSVLLDEVYRDYIGYVSRRRHLSPDSLRSIIDNVTLMTSPEAVRLGLADG 236 Query: 227 V 227 V Sbjct: 237 V 237 >gi|150395686|ref|YP_001326153.1| peptidase S49 [Sinorhizobium medicae WSM419] gi|150027201|gb|ABR59318.1| peptidase S49 [Sinorhizobium medicae WSM419] Length = 288 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 8/168 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS I++ I+ + + RK V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAISINSPGGSPVQSRLIYQRIRDLAQEKRKRVLIFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P L K+GV + + K PF + ++ ++ Sbjct: 118 DPTSIVGSIGVVSGGFGFP---DLLKKIGVERRVYTAGENKVLLDPFQPEKERDIEFLKG 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + F+++V R L G WTG +++GL+D +G Sbjct: 175 LQLEIHDIFIQMVKSRRGSLLADHPDLFSGLFWTGQRGQELGLVDSLG 222 >gi|90425823|ref|YP_534193.1| peptidase S49 [Rhodopseudomonas palustris BisB18] gi|90107837|gb|ABD89874.1| peptidase S49 [Rhodopseudomonas palustris BisB18] Length = 302 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 9/178 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 ++R +A A+ ++++SPGGS I+ I+++ K PVI V ++AAS GY++ Sbjct: 61 LDRAFATRNAKAVALAINSPGGSPVQSRQIYLRIRQLAAEKKLPVIAFVEDVAASGGYML 120 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +CA++ I +S+VGSIGV+ F +P + L K+GV + + KA+ PF + Sbjct: 121 ACAADEIYVDPSSIVGSIGVVGGTFGFPEL---LKKIGVERRLYTAGEHKAQLDPFLPED 177 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVG 228 P+ V ++ + + F+ LV +SR +L G W G + +GL D +G Sbjct: 178 PEDVARVKALQREIHAMFISLVKDSRGAKLKGAEDLLFSGEYWAGGTSVTLGLSDGIG 235 >gi|146282967|ref|YP_001173120.1| putative peptidase [Pseudomonas stutzeri A1501] gi|145571172|gb|ABP80278.1| putative peptidase [Pseudomonas stutzeri A1501] gi|327481318|gb|AEA84628.1| putative peptidase [Pseudomonas stutzeri DSM 4166] Length = 327 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I +RG I D + ++ + D + +I+ ++SPGGS I+ I+ Sbjct: 74 HTAVINVRGMIADEESASADNIVGALRAAFEDANTKGVILRINSPGGSPVQSGYIYDEIR 133 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ P I + ++ AS Y I+ A++ I A ++SLVGSIGV ++KL Sbjct: 134 RLRGEYPAIKVYAVITDLGASGAYYIASAADEIYADKSSLVGSIGVTAATFGFVDTMEKL 193 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLV 206 GV + + KA PF P+ + + V+ +++ F+ V R + + Sbjct: 194 GVERRVYTAGEHKAFLDPFQPEKPEETRFWRSVLATTHQQFIDSVKRGRGERLQDAQHPE 253 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 L G IW+G +A ++GL+D +G Sbjct: 254 LFSGLIWSGEQALELGLVDGLG 275 >gi|110834091|ref|YP_692950.1| putative periplasmic protease [Alcanivorax borkumensis SK2] gi|110647202|emb|CAL16678.1| putative protease sohB [Alcanivorax borkumensis SK2] Length = 350 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 97/177 (54%), Gaps = 8/177 (4%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASN 119 ++DD ++V L SPGG ++ +++++N+ +T V ++AAS GY+++C ++ Sbjct: 132 TQDDE---VLVRLESPGGLVHSYGLASSQLRRIRNQGIKLTVAVDQVAASGGYMMACIAD 188 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVAA +++GSIGV+ Q P L K + ++ + + K + E K Q Sbjct: 189 RIVAAPFAIIGSIGVVAQIPNFHRLLKKNDIDVELMTAGEYKRTMTMLGENTEKGRAKFQ 248 Query: 180 DVVDSSYHWFVRLVSES-RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ ++ F V ++ R + DK ++ G W G++AK++GL+D + +E+ Q Sbjct: 249 EELEETHQLFKGFVRDNRRGLDLDK---VATGEHWFGSQAKELGLVDEIMTSDELLQ 302 >gi|209517241|ref|ZP_03266086.1| peptidase S49 [Burkholderia sp. H160] gi|209502377|gb|EEA02388.1| peptidase S49 [Burkholderia sp. H160] Length = 333 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 12/243 (4%) Query: 7 KIKTRYVMLSLVTLTV---VYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 +I R+V L+++ L V + FS V H A +++ G+I +++++ ++ Sbjct: 49 RIFFRFVFLAVLALAVWGVLNFS-GERVATTGRHTAMVSLNGEIATDTSANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 D +I+ +SPGGS I I++++ + P I V +M AS GY + Sbjct: 108 SAFEDSDTAGVILYCNSPGGSPVQAGIINSEIRRLRGKYPSIPLYVVVGDMCASGGYYAA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A+ I + S+VGSIGVL +DKLG+ + + K PFS PK Sbjct: 168 AAAEKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTAGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + QD++D + F+ V + R +T + G WTG ++ ++GL D +G + V + Sbjct: 228 TIAQDMLDQIHAQFIDAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGLGDADYVAR 287 Query: 236 SLY 238 ++ Sbjct: 288 EIF 290 >gi|229592113|ref|YP_002874232.1| putative peptidase [Pseudomonas fluorescens SBW25] gi|229363979|emb|CAY51518.1| putative peptidase [Pseudomonas fluorescens SBW25] Length = 327 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + A I +RG I D + ++ + D +I+ ++SPGGS ++ Sbjct: 71 GAHYTALIEVRGVIADKESASADNIVSSLRAAFEDPKVKGVILRINSPGGSPVQSGYVYD 130 Query: 89 AIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPF 144 I++++ P I + ++ AS Y I+ A++ I A + SLVGSIGV Y +V Sbjct: 131 EIRRLRGLHPDIKLYAVISDLGASGAYYIASAADQIYADKASLVGSIGVTAAGYGFVGT- 189 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLGV ++ S K+ PF Q Q V+D+++ F+ V + R + Sbjct: 190 MEKLGVERRTYTSGEHKSFLDPFQPQKADETQFWQGVLDTTHRQFIASVKQGRGDRLKDK 249 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 L G +W+G +A +GLID +G V Sbjct: 250 DHPELFSGLVWSGEQALPLGLIDGLGSASSV 280 >gi|190890590|ref|YP_001977132.1| peptidase [Rhizobium etli CIAT 652] gi|190695869|gb|ACE89954.1| peptidase protein [Rhizobium etli CIAT 652] gi|327192814|gb|EGE59741.1| peptidase protein [Rhizobium etli CNPAF512] Length = 286 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ ++++SPGGS IF I+++ + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAIAINSPGGSPVQSRLIFTRIRELAREKKKKVLIFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF K ++ ++ Sbjct: 118 DATSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R + G W+G ++GLID +G + + Y Sbjct: 175 LQLEIHQVFIAMVRERRAGKLKDDATVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG 233 >gi|255320325|ref|ZP_05361509.1| periplasmic serine protease [Acinetobacter radioresistens SK82] gi|262379389|ref|ZP_06072545.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] gi|255302520|gb|EET81753.1| periplasmic serine protease [Acinetobacter radioresistens SK82] gi|262298846|gb|EEY86759.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] Length = 338 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 12/203 (5%) Query: 37 HVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 H+A I I G I+ +S++ + ++R ++ A++++++SPGGS + I++ I Sbjct: 81 HLAVIDIIGTIDSSDRSVNSEDTNKALKRAFEAKNSQAIVLNINSPGGSPVQSDEIWQEI 140 Query: 91 QKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + K + P V + +M AS Y I+ A++ I +SLVGSIGV+ V K Sbjct: 141 RYYKQQYPEKKVYALIGDMGASGAYYIASAADEIWVNPSSLVGSIGVIMPNYGVMGLAQK 200 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTL 205 LGV +++ S K S VNP + +Q V+D+ + F+ V E R + + Sbjct: 201 LGVEDRTLTSGDNKDILSMTKPVNPAQREHVQAVLDNVHSHFIAAVKEGRGKRLKSNDPA 260 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 + S G W+G +A K+G+ D G Sbjct: 261 IFS-GLFWSGEQAVKLGVADRTG 282 >gi|299134685|ref|ZP_07027877.1| peptidase S49 [Afipia sp. 1NLS2] gi|298590495|gb|EFI50698.1| peptidase S49 [Afipia sp. 1NLS2] Length = 293 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 3/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +E+ A A+ + ++SPGGS I+ I+++ K PV+ V ++AAS GY+I Sbjct: 56 LEKAFETKRAKAVALVINSPGGSPVQSHQIYARIRQLAETKKIPVLAFVEDVAASGGYMI 115 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA + I +S++GSIGV+ + + K+G+ + S K+ PF +P Sbjct: 116 ACAGDEIFCDSSSILGSIGVIGGTFGFQDLIKKIGIERRIYTSGEHKSSLDPFLPESPDD 175 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V ++ + + F+ LV SR + L G W G + K+GL D +G V Sbjct: 176 VARLKAIQREIHDSFIDLVKRSRGARLQGEASYLFSGEYWAGERSVKLGLADGIGDLRSV 235 Query: 234 WQSLYA 239 ++ Y Sbjct: 236 VRARYG 241 >gi|311695110|gb|ADP97983.1| family S49 unassigned peptidase [marine bacterium HP15] Length = 347 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 27/251 (10%) Query: 17 LVTLTVVYFSWSSHVED-NSPHVARIAIRG-----QIEDSQELIERIERISRDDSATALI 70 + L ++ F +E H A + I G ++ + ++ + + ++ A+I Sbjct: 75 IALLFLIKFPLGDSLEGVTGKHTALVEINGPIAADELASADNIVGSLRTAFEEPNSVAVI 134 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETS 127 + ++SPGGS ++ I++++ P V + ++ AS Y I+ A++ I A S Sbjct: 135 LRINSPGGSPVQSGYVYDEIKRLREEYPEKKVYAVISDIGASGAYYIAAAADEIYANRAS 194 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 LVGSIGV+ ++K+GV + + KA PFS + V Q V+++++ Sbjct: 195 LVGSIGVVAGGFGFTEVMEKIGVDRRLYTAGENKAFLDPFSPEQEEEVTFWQSVLENTHQ 254 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG----------GQEEVWQSL 237 F+ V + R L G +W+G +A ++GL D +G GQEE+ Sbjct: 255 QFIEAVKQGRGDRLADDERLFSGLVWSGEQAVELGLADGLGSASHVARQIIGQEEL---- 310 Query: 238 YALGVDQSIRK 248 VD S RK Sbjct: 311 ----VDYSRRK 317 >gi|332306445|ref|YP_004434296.1| Peptidase S49 domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173774|gb|AEE23028.1| Peptidase S49 domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 344 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + +Q++K++K P+ V ++AAS GY+++C ++ ++AA+ + Sbjct: 132 VLVRLESGGGVVHGYGLAASQLQRLKDKKIPLTVSVDKVAASGGYMMACVADNVLAAKFA 191 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + K + F E N + + +D ++ + Sbjct: 192 IIGSIGVIAQIPNFNKLLKKNDIEFEQHTAGQFKRTLTMFGENNDEGREKFRDELEDVHQ 251 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V E R P ++ G W G++A ++GL+D + Sbjct: 252 MFKGFVQEHR--PALAIDTVATGEYWYGSKALELGLVDTI 289 >gi|146278889|ref|YP_001169048.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145557130|gb|ABP71743.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 265 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 3/198 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE- 102 RG + D Q L IE+ R + + ++SPGGS I I+++ V Sbjct: 28 RGGLSD-QGLASLIEKAFRRGKPAGVALVINSPGGSPVQSSLIAARIRRLAEEHEVRVHA 86 Query: 103 -VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++CA + I E+S+VGSIGV+F F+ + G+ + + K Sbjct: 87 FVEDVAASGGYWLACAGDDIWVDESSIVGSIGVIFASFGFHDFMTRNGIERRVHTAGRSK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF + ++ ++ + + + F+ V +R D++ L + IWTG EA ++ Sbjct: 147 SLADPFLPEKSEDIERLKALQEPIHRAFIDHVKRNRGARLDESADLFNADIWTGQEAVRL 206 Query: 222 GLIDVVGGQEEVWQSLYA 239 GL D V Q +Y Sbjct: 207 GLADGVAHLVPKMQEIYG 224 >gi|260549329|ref|ZP_05823549.1| periplasmic serine protease [Acinetobacter sp. RUH2624] gi|260407735|gb|EEX01208.1| periplasmic serine protease [Acinetobacter sp. RUH2624] Length = 365 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 19/207 (9%) Query: 37 HVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 H+A + I G I+ +S++ + ++R ++ A+ ++++SPGGS + I++ Sbjct: 107 HLAVVDIVGTIDASSNQSVNSEDTNKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQE 166 Query: 90 IQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ +K P V + +M AS Y I+ A++ I+ +SLVGSIGV+ + Sbjct: 167 IRYLKKEHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQ 226 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ +++ + K S +NP + +Q V+D+ + F+ V E R K L Sbjct: 227 KLGIEDRTLTAGTNKDILSMTKPINPVQREHIQSVLDNVHTHFINAVKEGRG----KRLK 282 Query: 207 LSD-----GRIWTGAEAKKVGLIDVVG 228 +D G WTG +A ++G+ D G Sbjct: 283 SNDPAIFSGLFWTGEQAIQLGVADRSG 309 >gi|118581390|ref|YP_902640.1| signal peptide peptidase SppA, 36K type [Pelobacter propionicus DSM 2379] gi|118504100|gb|ABL00583.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pelobacter propionicus DSM 2379] Length = 320 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 4/204 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E +++ +DD +I+ + SPGGS A + I I + K R+ PV + + AS GY Sbjct: 79 EALQKAEKDDRIAGVILRIDSPGGSVTASDIIHHDITEFKKRRRIPVHACIMGVGASGGY 138 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 + A++ I+A T++ GSIGV+ + L KLG+ ++VKS K S F P Sbjct: 139 YAAAAADRIIAHPTAITGSIGVILMKFNLAGLLGKLGIEEQAVKSGDKKDFFSLFRRATP 198 Query: 173 KAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ Q++++ + F+ +V + + D+ L+DGRI+T +A + L+D G Sbjct: 199 EEEKLAQEIINQLHSRFLDVVMQRPGNRLSRDELARLADGRIYTAGQALQARLVDGTGYL 258 Query: 231 EEVWQSLYALGVDQSIRKIKDWNP 254 ++V ++ D+ R + + P Sbjct: 259 DDVISAMRKQIKDEQARVVSYYRP 282 >gi|159184399|ref|NP_353659.2| proteinase sohB [Agrobacterium tumefaciens str. C58] gi|159139712|gb|AAK86444.2| proteinase sohB [Agrobacterium tumefaciens str. C58] Length = 260 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +SL+SPGGS I+ I+++ + K V+ V ++AAS GY+I+ A + I+A Sbjct: 29 APAVAISLNSPGGSPVQARMIYNRIRQLAEEKDKKVLIFVEDVAASGGYMIALAGDEIIA 88 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P L K+GV + + K PF + ++ Sbjct: 89 DPTSIVGSIGVVSGGFGFP---EMLRKIGVERRVYTAGENKVILDPFQPEKEGDIDYLKS 145 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ F+ +V R L G WTG +GLID +G EV + Y Sbjct: 146 LQVEIHNVFIDMVKMRRGSKLKGDDALFSGLFWTGMRGLDLGLIDGLGDMREVLRRRYG 204 >gi|120610301|ref|YP_969979.1| serine peptidase [Acidovorax citrulli AAC00-1] gi|120588765|gb|ABM32205.1| protein C [Acidovorax citrulli AAC00-1] Length = 316 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV 99 R IR I D IERI+ D + SPGGS + I+ + +KP+ Sbjct: 105 RRDIRAAINDPT-----IERIALD---------IDSPGGSVAGAFELATDIRAMSAQKPI 150 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 V+ M S GYLI+ A + IV + TS VGSIGV+ + +KLGV + +V + Sbjct: 151 TGVVNFMGYSGGYLIASACSEIVVSRTSGVGSIGVIASHMDRAALNEKLGVKVTTVFAGA 210 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 K + +P ++ ++++++ D+V+ Y FV V+E R + G ++ G A Sbjct: 211 HKNDLTPHEPISEQSLRVLTDLVNEGYEMFVSAVAEYRGMTAAAVRATEAG-LYRGDAAI 269 Query: 220 KVGLIDVVGGQEEVWQSL-YALGVDQSIR 247 K GL D + ++ + +A+ D++ R Sbjct: 270 KAGLADRLQSPQDAIDGIAHAVASDRARR 298 >gi|254438067|ref|ZP_05051561.1| peptidase, S49 (protease IV) family [Octadecabacter antarcticus 307] gi|198253513|gb|EDY77827.1| peptidase, S49 (protease IV) family [Octadecabacter antarcticus 307] Length = 262 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%) Query: 34 NSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + PHVA I ++G I S + L + IE+ R A+ + +SSPGGS I Sbjct: 10 SDPHVAVIRLQGTIASSGRSLNDRGLTDSIEKAFRS-KPKAVALEISSPGGSPVQSSLIC 68 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K PV + V ++AAS GY ++ A + I S+VGSIGV+ + L Sbjct: 69 ARIRRLADEKDIPVYSFVEDVAASGGYWLATAGDEIYVDRGSIVGSIGVITAGFGLTGTL 128 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKT 204 DK+G + + K+ PF P V+ ++ ++D + +F VS R D+ Sbjct: 129 DKIGAERRVYTAGKSKSMLDPFQAEKPADVKRLKGLLDDLHVFFKDHVSTRRAGKIVDQD 188 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 L D IW G ++ VGL D +G Sbjct: 189 LFTGD--IWVGQKSIDVGLADHLG 210 >gi|115526406|ref|YP_783317.1| peptidase S49 [Rhodopseudomonas palustris BisA53] gi|115520353|gb|ABJ08337.1| peptidase S49 [Rhodopseudomonas palustris BisA53] Length = 300 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASA 110 L +ER A A+ ++++SPGGS I+ I+++ K PVI V ++AAS Sbjct: 54 LARTLERAFAVPHAKAVALAINSPGGSPVQSRLIYLRIRQLAAEKKLPVIAFVEDVAASG 113 Query: 111 GYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 GY+++CA + I +S++GSIGV+ F +P + L K+GV + + KA+ PF Sbjct: 114 GYMLACAGDEIYCDPSSILGSIGVVGGTFGFPEL---LKKIGVERRIYTAGEHKAQLDPF 170 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY--DKTLVLSDGRIWTGAEAKKVGLID 225 +P V ++ + + F+ LV +SR I D+ + S G W G + +GL D Sbjct: 171 LPEDPDDVARVKALQREIHAIFIALVKDSRGIRLKGDEGKLFS-GEYWAGDSSIALGLAD 229 Query: 226 VVGGQEEVWQSLYA 239 +G + ++ + Sbjct: 230 GIGDLRSILRTRFG 243 >gi|15964602|ref|NP_384955.1| putative protease protein [Sinorhizobium meliloti 1021] gi|307309348|ref|ZP_07589011.1| peptidase S49 [Sinorhizobium meliloti BL225C] gi|307320084|ref|ZP_07599505.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|15073780|emb|CAC45421.1| Probable proteinase [Sinorhizobium meliloti 1021] gi|306894299|gb|EFN25064.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306900217|gb|EFN30835.1| peptidase S49 [Sinorhizobium meliloti BL225C] Length = 288 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 8/168 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS I++ I+ + + RK V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAISINSPGGSPVQSRLIYQRIRDLAQEKRKRVLIFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P L K+GV + + K PF + ++ ++ Sbjct: 118 DPTSIVGSIGVVSGGFGFP---DLLKKIGVERRVYTAGENKVVLDPFQPEKERDIEFLKG 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + F+++V R L G WTG +++GL+D +G Sbjct: 175 LQLEIHDIFIQMVKSRRGSLLADHPDLFSGLFWTGQRGQELGLVDALG 222 >gi|66816573|ref|XP_642296.1| hypothetical protein DDB_G0278333 [Dictyostelium discoideum AX4] gi|60470359|gb|EAL68339.1| hypothetical protein DDB_G0278333 [Dictyostelium discoideum AX4] Length = 649 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 7/193 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S L+ I + D A+++ ++S GGS A + + I+ K K ++ + A Sbjct: 350 SDSLVLAIRSATLDKDVKAIVIRVNSGGGSYIASDMVHHEIEASKKAGKKIVISMGTYCA 409 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF-LDKLGVSIKSVKSSPMKAEPSP- 166 S GY +C ++ IVA +L GSIGVL +K +K+ V ++ +P A + Sbjct: 410 SGGYFFACNADKIVALGATLTGSIGVLTAKFNLKGMWEEKVHVKFDALHLNPDGATDNST 469 Query: 167 -FSEVNPKAVQMMQDV---VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 FS ++ + + +V +D Y F VS+ R + D+ ++ GR+WTGA+A K+ Sbjct: 470 YFSSLHNYTEKQLAEVNSYMDFIYEDFTSKVSKGRRLTRDQVEEIARGRVWTGAQALKLS 529 Query: 223 LIDVVGGQEEVWQ 235 L+D +GG +E + Sbjct: 530 LVDKLGGLKEAIE 542 >gi|330945618|gb|EGH47112.1| peptidase S49, SppA [Pseudomonas syringae pv. pisi str. 1704B] Length = 262 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 8/190 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV +DKLGV ++ S KA PF Q Q V+D+++ Sbjct: 179 VGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQ 238 Query: 189 FVRLVSESRN 198 F+ V + R Sbjct: 239 FIASVKQGRG 248 >gi|167626930|ref|YP_001677430.1| S49 family serine peptidase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596931|gb|ABZ86929.1| serine peptidase, S49 family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 214 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 5/162 (3%) Query: 69 LIVSLSSPGGSAYAGEAIF---RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +IV ++SPGGS + I+ R +QK P+ ++ AS GY I+ + I A + Sbjct: 1 MIVEINSPGGSPVQSDEIYSHMRYLQKKYPNIPMYAVCTDVCASGGYYIAAGAKDIYANK 60 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++VGSIGV+ +DKLG+ ++ S K PFS P+ ++D + Sbjct: 61 MTIVGSIGVIGSGFGFTGLMDKLGIERRTYTSGSNKDFLDPFSPERPEQTAQFNKLLDET 120 Query: 186 YHWFVRLVSESR-NIPYDKTLVLS-DGRIWTGAEAKKVGLID 225 + F+R V +SR N DK + + G ++G +A+++GLID Sbjct: 121 HQVFIRAVEQSRGNRLKDKAIDTTFSGEPFSGIQAQRMGLID 162 >gi|254420657|ref|ZP_05034381.1| signal peptide peptidase SppA, 67K type [Brevundimonas sp. BAL3] gi|196186834|gb|EDX81810.1| signal peptide peptidase SppA, 67K type [Brevundimonas sp. BAL3] Length = 592 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 2/185 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 S + E I D A++ +SSPGGS A E I A++ K KPV+ + AA Sbjct: 324 SDDTAEAIYDAIEDKGVKAIVFRVSSPGGSPEASEQILAAVRAAKAAGKPVVVSMGAYAA 383 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK-SSPMKAEPSPF 167 S GY IS ++ IVA ++L GSIGV + L + GV ++ + P SP Sbjct: 384 SGGYWISSEADWIVAQPSTLTGSIGVFGGKFVIADALGRFGVDMRELTVGGPYADAFSPT 443 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +D Y F+ V+ R + + ++ GR+WTGA+A +GL+D + Sbjct: 444 QSFTNSQRAAFAGSMDRIYDDFITRVATGRKLEPARVREIAKGRVWTGAQALPLGLVDQL 503 Query: 228 GGQEE 232 GG E Sbjct: 504 GGLTE 508 >gi|296102097|ref|YP_003612243.1| putative periplasmic protease [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056556|gb|ADF61294.1| putative periplasmic protease [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 348 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q+++ ++ P+ V ++AAS GY+++C ++ IVAA S Sbjct: 136 VVVRLESPGGVVHGYGLAASQLQRLREKQIPLTVAVDKVAASGGYMMACVADKIVAAPFS 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 196 IIGSIGVVAQIPNFNRFLKSKEIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHH 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D VG +++ +L Sbjct: 256 LFKDFVHRMR--PALDIDQVATGEHWYGTQALEKGLVDEVGTSDDLLLNL 303 >gi|257790843|ref|YP_003181449.1| signal peptide peptidase SppA, 36K type [Eggerthella lenta DSM 2243] gi|325831972|ref|ZP_08165069.1| signal peptide peptidase SppA, 36K type [Eggerthella sp. HGA1] gi|257474740|gb|ACV55060.1| signal peptide peptidase SppA, 36K type [Eggerthella lenta DSM 2243] gi|325486293|gb|EGC88745.1| signal peptide peptidase SppA, 36K type [Eggerthella sp. HGA1] Length = 350 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%) Query: 25 FSWSSHVED----NSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLS 74 F S V+D V I I G I+ + L +++R ++ A+++ ++ Sbjct: 73 FGTGSTVDDVDYLTGDAVGVIDIDGTIQYDNTTSSPEGLKAQLDRAEKNSHIKAVVLRVN 132 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 S GG+A AGE + ++ R KPV+ + ASA Y IS ++ I A+T+ +G+I Sbjct: 133 SGGGTATAGEEMADYVRGFSERTGKPVVVSSASVNASAAYEISSQADYIYTAKTTAIGAI 192 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G + Q + ++KLG+S+ +V S+ K + + QD VD F++ Sbjct: 193 GTVMQVTDLSGLMEKLGISVDNVTSADSKDSSYGTRPLTEEERAYYQDQVDQINETFIQT 252 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+E R++P + L+ G +TG A + GL D +G +++ Sbjct: 253 VAEGRDMPVEDVRALATGLTFTGMTAVENGLADEIGTKDDA 293 >gi|317488446|ref|ZP_07946999.1| signal peptide peptidase SppA [Eggerthella sp. 1_3_56FAA] gi|316912490|gb|EFV34046.1| signal peptide peptidase SppA [Eggerthella sp. 1_3_56FAA] Length = 369 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%) Query: 25 FSWSSHVED----NSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLS 74 F S V+D V I I G I+ + L +++R ++ A+++ ++ Sbjct: 92 FGTGSTVDDVDYLTGDAVGVIDIDGTIQYDNTTSSPEGLKAQLDRAEKNSHIKAVVLRVN 151 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 S GG+A AGE + ++ R KPV+ + ASA Y IS ++ I A+T+ +G+I Sbjct: 152 SGGGTATAGEEMADYVRGFSERTGKPVVVSSASVNASAAYEISSQADYIYTAKTTAIGAI 211 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G + Q + ++KLG+S+ +V S+ K + + QD VD F++ Sbjct: 212 GTVMQVTDLSGLMEKLGISVDNVTSADSKDSSYGTRPLTEEERAYYQDQVDQINETFIQT 271 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+E R++P + L+ G +TG A + GL D +G +++ Sbjct: 272 VAEGRDMPVEDVRALATGLTFTGMTAVENGLADEIGTKDDA 312 >gi|332288220|ref|YP_004419072.1| putative periplasmic protease [Gallibacterium anatis UMN179] gi|330431116|gb|AEC16175.1| putative periplasmic protease [Gallibacterium anatis UMN179] Length = 361 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 11/199 (5%) Query: 36 PHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 P V I +G I+ + +E I + ++R + L+ L SPGG + + Sbjct: 112 PCVYVIDFKGDIQANATNSLREEINAVLAVARPEKDEVLL-RLESPGGVVHGYGFAASQL 170 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q+++N+ P+ V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P + L K Sbjct: 171 QRLRNKHIPLTIAVDKVAASGGYMMACVADKIVAAPFAIIGSIGVVAQVPNIHRLLKKHD 230 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 V ++ + + K + E K Q Q + ++ F + V++ R + DK ++ Sbjct: 231 VDVEVMTAGEYKRTVTVLGENTEKGKQKFQQELQETHDLFKQFVAQHRPQVEIDK---VA 287 Query: 209 DGRIWTGAEAKKVGLIDVV 227 G W G +A + LID V Sbjct: 288 TGEHWFGQQALDLALIDEV 306 >gi|163311059|pdb|3BEZ|A Chain A, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals gi|163311060|pdb|3BEZ|B Chain B, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals gi|163311061|pdb|3BEZ|C Chain C, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals gi|163311062|pdb|3BEZ|D Chain D, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals Length = 593 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 17/231 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGGS A Sbjct: 298 DTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTAS 357 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + + KPV+ AAS GY IS +N IVA ++L GSIG+ V+ Sbjct: 358 EVIRAELAAARAAGKPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVE 417 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LD +GV V +SP+ A+ S + P+A Q +++ Y F+ LV+++R+ + Sbjct: 418 NSLDSIGVHTDGVSTSPL-ADVSITRALPPEAQLXXQLSIENGYKRFITLVADARHSTPE 476 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + ++ G +WTG +AK GL+D +G ++ A+ + K+K W+ Sbjct: 477 QIDKIAQGHVWTGQDAKANGLVDSLGDFDD------AVAKAAELAKVKQWH 521 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T ++ L + GG + + I +A+++ ++ + V E + Sbjct: 74 DIVNTIRQAKDDRNITGIVXDLKNFAGGDQPSXQYIGKALKEFRDSGKPVYAVGENYSQG 133 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 134 QYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD 193 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG-- 222 + +P A + + + ++ V+ +R IP ++ L +G TG + K Sbjct: 194 DXSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALE 253 Query: 223 --LIDVVGGQEEVWQSL 237 L+D + E+ ++L Sbjct: 254 NKLVDALASSAEIEKAL 270 >gi|85059384|ref|YP_455086.1| putative periplasmic protease [Sodalis glossinidius str. 'morsitans'] gi|84779904|dbj|BAE74681.1| putative protease [Sodalis glossinidius str. 'morsitans'] Length = 348 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 3/170 (1%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + +Q+++ + P+ V ++AAS GY+++C ++ IVA Sbjct: 132 SGDEVLLRLESPGGVVHGYGLAASQLQRLREKGIPLTVAVDKVAASGGYMMACVADRIVA 191 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P L + + ++ + K + F E +P + Q ++ Sbjct: 192 APFAIIGSIGVVAQIPNFHRLLKRNDIDMELHTAGAYKRTLTLFGENSPAGREKFQQELN 251 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ F V R P ++ G W G +A+ +GL+D +G +++ Sbjct: 252 ETHQLFKSFVQRMR--PTLDVDTVATGEHWYGEQAQHLGLVDAIGTSDDL 299 >gi|317051372|ref|YP_004112488.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] gi|316946456|gb|ADU65932.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] Length = 277 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 98/197 (49%), Gaps = 2/197 (1%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 PH+ + + G + D + ++ +R+ T ++V ++SPGG + ++ I+ Sbjct: 34 PHIGLVTLEGILYDIDFVSGALDDFARNPMITGVLVRVNSPGGVVTPSQELYSLIRHYP- 92 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV +AAS + ++ I T++ GSIGV+ + + +K+G+ +V Sbjct: 93 -KPVWAFHDGLAASGALFATIGADRIGTQSTTITGSIGVIIRSINARELYEKIGIEEITV 151 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ P K S + +++++++ SY FV ++ SR++ + ++DGRI++G Sbjct: 152 KTGPFKNILSTNQPLGDDERRILEELIGDSYDEFVNAIASSRDMDKQLLIDIADGRIFSG 211 Query: 216 AEAKKVGLIDVVGGQEE 232 A + GL D + E Sbjct: 212 LRAVEYGLADEISSYHE 228 >gi|320334156|ref|YP_004170867.1| peptidase S49 [Deinococcus maricopensis DSM 21211] gi|319755445|gb|ADV67202.1| peptidase S49 [Deinococcus maricopensis DSM 21211] Length = 545 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 8/189 (4%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 + G + S ++ + R D + A+++ + SPGGSA A + I+R +Q + KPV+ Sbjct: 295 VGGAMAGSDTVVAALRRAKADKATRAIVLYVDSPGGSALASDLIWREVQT--SEKPVVAV 352 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV---KSSP 159 + +AAS GY + + I+A+ ++ GSIGV+ P ++ F + G++ + V + + Sbjct: 353 MGAVAASGGYYVVAGAQRILASPYTITGSIGVVTGKPVLEAFNARHGLNPERVARQEHAL 412 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 M + PFSE + +++ ++ Y F V+ R + + L GRIW+G +A Sbjct: 413 MYSSSRPFSE---GELALVERSIEEVYARFTARVAAGRKLSVARVDELGRGRIWSGQDAL 469 Query: 220 KVGLIDVVG 228 GLID +G Sbjct: 470 THGLIDELG 478 >gi|187924894|ref|YP_001896536.1| peptidase S49 [Burkholderia phytofirmans PsJN] gi|187716088|gb|ACD17312.1| peptidase S49 [Burkholderia phytofirmans PsJN] Length = 334 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 8/210 (3%) Query: 37 HVARIAIRGQIE-DSQELIERIE---RISRDDSATA-LIVSLSSPGGSAYAGEAIFRAIQ 91 H A + + G+I D+ E + + + DD+ TA +I+ +SPGGS I+ I+ Sbjct: 82 HTAMVTLDGEISADTNANAEDVNTALQSAFDDAGTAGVILRCNSPGGSPVQAGIIYNEIR 141 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + P I V +M AS GY + A++ I + S+VGSIGVL +DKL Sbjct: 142 RLRAKYPSIPLYVVVGDMCASGGYYAAAAADKIYVDKASIVGSIGVLMDSFGFTGLMDKL 201 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + S K PFS PK + QD++D + F+ V + R +T + Sbjct: 202 GIQRRLHTSGENKGFFDPFSPETPKMDEHAQDMLDQIHAQFIDAVRQGRGKRLHETPDMF 261 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 G WTG ++ ++GL D +G + V + L+ Sbjct: 262 SGLFWTGQKSVELGLADGLGDADYVARDLF 291 >gi|70729174|ref|YP_258910.1| signal peptide peptidase SppA, 36K type [Pseudomonas fluorescens Pf-5] gi|68343473|gb|AAY91079.1| signal peptide peptidase SppA, 36K type [Pseudomonas fluorescens Pf-5] Length = 329 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 12/241 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + + + L + + + A I + G I D + ++ + Sbjct: 43 IFFKLLTFVYLFAALALFTPLMTMEKNATRGGSYTAVIDVTGVIADKESASADNIVGSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ V + ++ AS Y I+ Sbjct: 103 TAFDDPKVKGIVLRINSPGGSPVQSGYVYDEIRRLRALHKDTKVYAVISDLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A++ I A + SLVGSIGV Y +V ++KLGV ++ S K+ PF P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGT-MEKLGVERRTYTSGEHKSFLDPFQPQKPEE 221 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q Q V+D+++ F+ V + R + + L G +W+G +A ++GLID +G Sbjct: 222 TQFWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLVWSGEQALQLGLIDGLGNTSS 281 Query: 233 V 233 V Sbjct: 282 V 282 >gi|226943603|ref|YP_002798676.1| peptidase S49, SppA [Azotobacter vinelandii DJ] gi|226718530|gb|ACO77701.1| Peptidase S49, SppA [Azotobacter vinelandii DJ] Length = 325 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 10/210 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + H A + +RG I D + ++ + +D +++ ++SPGGS I+ Sbjct: 69 SGEHTALVEVRGMIADDEAASADNVVGSLRAAFKDKHTKGVVLRINSPGGSPVQSGYIYD 128 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I++++ P + + ++ AS Y ++ A++ I A + SLVGSIGV + Sbjct: 129 EIRRLRAEHPDTKLYAVITDLGASGAYYVASAADAIYADKASLVGSIGVTAASFGFVGAM 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDK 203 ++LGV + + KA PF V+ Q+V++ ++ F+ V + R + + Sbjct: 189 ERLGVERRVYTAGEHKAFLDPFQSQKEGEVRFWQEVLEVTHRQFIDSVKQGRGERLKDKE 248 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 L G +W+G +A ++GL+D +G V Sbjct: 249 HPELFSGLVWSGEQALQLGLVDALGSASHV 278 >gi|319943489|ref|ZP_08017771.1| signal peptide peptidase SppA [Lautropia mirabilis ATCC 51599] gi|319743304|gb|EFV95709.1| signal peptide peptidase SppA [Lautropia mirabilis ATCC 51599] Length = 329 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 3/175 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAI---FRAIQKVKNRKPVITEVHEMAASAGYL 113 + R D A +++ ++SPGGS I R +++ KP+ + E+ AS GY Sbjct: 100 LRRAFSDPRAVGVVLRINSPGGSPVQSGMIVDEMRRQRRLHPEKPLHAVIEEVGASGGYY 159 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL Y V+ L LG+ ++ + KA P + ++ + Sbjct: 160 IAAAADNIYVDKASIVGSIGVLLSYYGVQDTLKMLGIERRTQTAGKNKAFLDPTAPMSAE 219 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++D + F+ +V + R +T G WTG + ++GL D +G Sbjct: 220 QKAHAQAMLDEVHRQFIDVVKQGRGQRLKETPETFSGLFWTGERSIQLGLADGLG 274 >gi|161503176|ref|YP_001570288.1| putative periplasmic protease [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864523|gb|ABX21146.1| hypothetical protein SARI_01244 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 363 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + IVAA ++ Sbjct: 152 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIVAAPFAI 211 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 212 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 271 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A K GL+D + +EV Sbjct: 272 FKDFVQRMR--PTLDIEQVATGEHWYGQQALKKGLVDEINTSDEV 314 >gi|227540619|ref|ZP_03970668.1| protease IV [Sphingobacterium spiritivorum ATCC 33300] gi|227239558|gb|EEI89573.1| protease IV [Sphingobacterium spiritivorum ATCC 33300] Length = 473 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 9/152 (5%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 GQI S ++ + ++ DD A++ ++SPGGSA A + I+R + K KP+I + Sbjct: 325 GQIA-SDKVSRELRKLREDDRVKAVVFRVNSPGGSALASDVIWREVILTKKVKPIIVSMG 383 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSP---- 159 + AAS GY IS A++ I A ++ GSIGV P K L DKLG+ VK+ Sbjct: 384 DYAASGGYYISAAADSIFAERNTITGSIGVFGLIPNFKGLLNDKLGIHFDGVKTGAYADL 443 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 M A P + +Q+ V+ +Y F + Sbjct: 444 MSAPDRPLTAEERNIIQLE---VNKTYGSFTK 472 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 7/188 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE-MAAS 109 +++ERI+ D + +++S + I A+ K K I E Sbjct: 85 DDILERIQSAKSDSKIKGIYLNISGVNTGFATLQEIRDALIDFKASKKFIVSYSEGYTQK 144 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A YL S A I + E SL G+ ++K LDKLGV ++ VK K+ PF Sbjct: 145 AYYLASVADKIYLNPEGSL-DFRGLSTSIMFMKDALDKLGVDMQVVKVGTYKSAVEPFML 203 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLID 225 P +Q ++ + S Y F+ VS SR IP D ++D AE A ++ L+D Sbjct: 204 NGMSQPNRLQ-VESYLGSLYATFLDNVSASRKIPADSLRSIADRYAVRDAEDAVRLKLVD 262 Query: 226 VVGGQEEV 233 V ++E+ Sbjct: 263 AVLYKDEL 270 >gi|209548133|ref|YP_002280050.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533889|gb|ACI53824.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 286 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ ++++SPGGS IF I+++ + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAITINSPGGSPVQSRLIFTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF K ++ ++ Sbjct: 118 DSTSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R + G W+G ++GL+D +G + + Y Sbjct: 175 LQLEIHQVFISMVRERRAGKLRDDAAVFSGLFWSGTRGLELGLVDGLGDMRQELKRRYG 233 >gi|189346140|ref|YP_001942669.1| signal peptide peptidase SppA, 36K type [Chlorobium limicola DSM 245] gi|189340287|gb|ACD89690.1| signal peptide peptidase SppA, 36K type [Chlorobium limicola DSM 245] Length = 597 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 1/199 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D AL++ + SPGG A A + + + +KP++ + +AAS GY+ + A + Sbjct: 337 DKEVKALVLRIDSPGGDALASSDMLQMLDSAAVKKPLVVSMSGIAASGGYMAALAGREVY 396 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ GSIGV P + K+G+ V + F + +A + Sbjct: 397 AMPLTVTGSIGVYALKPDISELARKVGLGRDVVTRGRFADANTVFKPLEGEAYEKFIGAS 456 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-G 241 Y F+ V+ SR + + ++ GR+WTG +AK+ GL+D GG ++ L G Sbjct: 457 GDIYLDFIGKVAASRKMSVAEVDSVAGGRVWTGRQAKQKGLVDHAGGLFAAVRAAQRLAG 516 Query: 242 VDQSIRKIKDWNPPKNYWF 260 +D S + P + WF Sbjct: 517 MDGSKQPQILLYPEQKSWF 535 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 13/173 (7%) Query: 89 AIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+KV+ + V+ +H A + YL++ A + IV + G+ + Y L + Sbjct: 109 AIEKVRAGGRKVVAYLHS-AEDSDYLLASACDSIVVERGGYLLLDGLKAESLYYTTPLGR 167 Query: 148 LGVSIKSVKSSPMKAEPSPFSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-T 204 +GV+ ++ + K+ P++ +P+ ++ + ++D Y ++ VS+ R I D Sbjct: 168 IGVTFQAAQWKKYKSGVEPYTRTAASPEYIEQINALLDDVYADYIGYVSKRRGISRDSLE 227 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 V+++ + + A+A K+GL D G +W+ A G R+I P +N Sbjct: 228 SVINNVALVSAAKAVKLGLAD---GVATIWELKRATG-----RRISGKEPEEN 272 >gi|261867946|ref|YP_003255868.1| putative periplasmic protease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413278|gb|ACX82649.1| S49 family peptidase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 352 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 E+ P + + +G I S+ L E I I + T ++V L SPGG + Sbjct: 100 EERKPTLYVLHFKGDISASETAALREEISAIIQVAKPTDEVLVCLESPGGVVHGYGLAAS 159 Query: 89 AIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K R +T V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLMRLKQRNIRLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLV 206 V + + + K + F E K Q Q ++ ++ F + V+++R ++ DK Sbjct: 220 HDVDVDVMTAGEYKRTMTIFGENTEKGKQKFQQELEETHQLFKQFVAQNRPHLDLDK--- 276 Query: 207 LSDGRIWTGAEAKKVGLID 225 ++ G W G +A + L+D Sbjct: 277 VATGEHWFGQQALNLNLVD 295 >gi|218682938|ref|ZP_03530539.1| putative peptidase [Rhizobium etli CIAT 894] Length = 286 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ ++++SPGGS IF I+++ + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAITINSPGGSPVQSRLIFTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF K ++ ++ Sbjct: 118 DATSIVGSIGVVSGGFGFPEL---LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ +V E R + G W+G ++GL+D +G + + Y Sbjct: 175 LQLEIHQVFIAMVRERRAGKLKDDAAVFSGLFWSGTRGLELGLVDGLGDMRQELKRRYG 233 >gi|156933742|ref|YP_001437658.1| putative periplasmic protease [Cronobacter sakazakii ATCC BAA-894] gi|156531996|gb|ABU76822.1| hypothetical protein ESA_01568 [Cronobacter sakazakii ATCC BAA-894] Length = 349 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 3/163 (1%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAA 124 A ++V L SPGG + +Q+++ R+ P+ V ++AAS GY+++C +N IVAA Sbjct: 134 ADEVLVRLESPGGVVHGYGLAASQLQRLRERQIPLTIAVDKVAASGGYMMACVANNIVAA 193 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +++GSIGV+ Q P L + + I+ + K + E + + ++ ++ Sbjct: 194 PFAIIGSIGVVAQIPNFNRLLKRNDIDIELHTAGQYKRTLTLLGENTEEGREKFREDLNE 253 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++H F V R P ++ G W G +AK+ GL+D + Sbjct: 254 THHLFKEFVHSMR--PSLDIDAVATGEHWYGVQAKEKGLVDEI 294 >gi|209886071|ref|YP_002289928.1| peptidase S49 [Oligotropha carboxidovorans OM5] gi|209874267|gb|ACI94063.1| peptidase S49 [Oligotropha carboxidovorans OM5] Length = 297 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 3/177 (1%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVA 123 A A+ + ++SPGGS I+ I+++ K PV+ V ++AAS GY+I+CA++ I Sbjct: 65 AQAVALVINSPGGSPVQSRQIYTRIRQLAAAKGIPVLAFVEDVAASGGYMIACAADEIFC 124 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S++GS+GV+ + F+ + G+ + S K+ PF NP V ++ + Sbjct: 125 DPSSILGSVGVIGGTFGFQDFIKRFGIERRIYTSGEHKSSLDPFLPENPDDVARLKAIQR 184 Query: 184 SSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F+ LV SR + L G W G + ++GL D +G V ++ + Sbjct: 185 DIHDDFIALVKRSRGARLKGEEAYLFSGEYWAGNRSIELGLADAIGDLRGVLRARFG 241 >gi|152978941|ref|YP_001344570.1| putative periplasmic protease [Actinobacillus succinogenes 130Z] gi|150840664|gb|ABR74635.1| Peptidase S49 domain protein [Actinobacillus succinogenes 130Z] Length = 353 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 106/208 (50%), Gaps = 9/208 (4%) Query: 32 EDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +++ P + + +G I+ S +E I + +++ + A +++ L SPGG + Sbjct: 100 QEHKPTLYVLNFKGDIQASATTALREEITALLSVAKPE-ADEVLLRLESPGGLVHGYGLA 158 Query: 87 FRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K +T V ++AAS GY+++C ++ IVAA ++VGS+GV+ Q P + L Sbjct: 159 ASQLARLKQAGIKLTVAVDKVAASGGYMMACVADKIVAAPFAIVGSVGVVAQVPNIHRLL 218 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + E K Q Q ++ ++ F R V+E+R P + Sbjct: 219 KKHDVDVDVMTAGEFKRTVTILGENTEKGKQKFQQELEETHELFKRFVAENR--PQLEVE 276 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ G W G +A +GLID + ++V Sbjct: 277 KIATGEHWFGQQALALGLIDKIATSDDV 304 >gi|90420150|ref|ZP_01228058.1| putative peptidase, family S49 [Aurantimonas manganoxydans SI85-9A1] gi|90335484|gb|EAS49234.1| putative peptidase, family S49 [Aurantimonas manganoxydans SI85-9A1] Length = 291 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 4/166 (2%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ + ++SPGGS I++ I+ + + K V+ V ++AAS GY+I+CA + I+A Sbjct: 58 APAVAIVINSPGGSPVQSRLIYQRIRDLAEEKDKQVLVFVEDVAASGGYMIACAGDEIIA 117 Query: 124 AETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +S+VGSIGV+ + +V+ + KLG+ + + KA PF P+ V+ ++ + Sbjct: 118 DPSSIVGSIGVVSGSFGFVEA-IAKLGIERRVHTAGSNKATLDPFQPERPEDVEHLKSLQ 176 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ LV +SR L G W+G ++GL+D +G Sbjct: 177 LEVHKTFIDLVKDSRGAKLADHDDLFTGLFWSGLRGLELGLVDRLG 222 >gi|325003037|ref|ZP_08124149.1| serine protease [Pseudonocardia sp. P1] Length = 298 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 2/195 (1%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEV 103 Q+ ++ + + +ER D A+ + ++SPGGS + I I+ + PV+ Sbjct: 49 QVLNAASVEKVLERAFAPDRLAAVALVINSPGGSPTQSQLIGDRIRSLAAEAEVPVLAFC 108 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY ++CA++ I A TS+VGSIGV+ + +DK GVS + + K+ Sbjct: 109 EDVAASGGYWLACAADEIYACSTSIVGSIGVVSAGFGLDGLIDKWGVSRRLHTAGGSKSR 168 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 PF + V + + + + F V E R L DG +W G ++++GL Sbjct: 169 LDPFLPEKAEDVAWLTGLQEQLHERFTGWVRERRGDRLAGDTELFDGEVWLGERSRELGL 228 Query: 224 IDVVGGQEEVWQSLY 238 +D +G +V + Sbjct: 229 VDGIGTVHDVLDERF 243 >gi|86748216|ref|YP_484712.1| peptidase S49 [Rhodopseudomonas palustris HaA2] gi|86571244|gb|ABD05801.1| Peptidase S49 [Rhodopseudomonas palustris HaA2] Length = 302 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER +A A+ ++++SPGGS I+ I+ + K PV V ++AAS GY+I Sbjct: 61 LERAFATRNAKAVALAINSPGGSPVQSRLIYLRIRALAAEKKLPVYAFVEDVAASGGYMI 120 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +C ++ I +S+VGSIGV+ + + K+GV + + KA+ PF +P Sbjct: 121 ACGADEIYCDPSSIVGSIGVVGGSFGFQELIKKIGVERRLYTAGEHKAQLDPFLPEDPGD 180 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V ++ + + F+ LV +SR + D + S G W GA + +GL D +G Sbjct: 181 VARVKALQQEIHALFISLVKDSRGARLKGDDAKLFS-GEYWAGATSVSLGLSDAIGDLRA 239 Query: 233 VWQSLYA 239 V + + Sbjct: 240 VLRDKFG 246 >gi|163739566|ref|ZP_02146976.1| peptidase, family S49 [Phaeobacter gallaeciensis BS107] gi|161387319|gb|EDQ11678.1| peptidase, family S49 [Phaeobacter gallaeciensis BS107] Length = 265 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 7/203 (3%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS----AYAGEAIFRAIQKVKNR 96 +A RG + D+ L +ER R A+ ++SPGGS A G I R +++K Sbjct: 25 MAGRGALNDAA-LGPVLERAFRKGKPAAVAFEINSPGGSPVQSALIGARIRRLSEELK-- 81 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 P I V ++AAS GY ++ +++ I A E+S++GSIGV+ FL + GV + Sbjct: 82 VPTIAFVEDVAASGGYWLAASADEIWADESSILGSIGVISAGFGAHVFLARQGVERRVYT 141 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K+ PF N + V+ ++ ++ + F+ V + R D + L G IW G Sbjct: 142 AGRSKSMLDPFRPENAEDVKRLKQLLGDIHDNFIAHVKDRRGDKLDTSKDLYTGEIWLGR 201 Query: 217 EAKKVGLIDVVGGQEEVWQSLYA 239 A +GLID +G Q+ + Sbjct: 202 RAVSLGLIDGIGHLRPKMQARFG 224 >gi|325292019|ref|YP_004277883.1| protease SohB [Agrobacterium sp. H13-3] gi|325059872|gb|ADY63563.1| protease SohB [Agrobacterium sp. H13-3] Length = 288 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS I+ I+++ + K V+ V ++AAS GY+I+ A + I+A Sbjct: 57 APAVAISVNSPGGSPVQARMIYNRIRQLAEEKDKKVLIFVEDVAASGGYMIALAGDEIIA 116 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 TS+VGSIGV+ F +P + L K+GV + + K PF ++ ++ Sbjct: 117 DPTSIVGSIGVVSGGFGFPEM---LKKIGVERRVYTAGENKVILDPFQPEKEGDIEYLKS 173 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ F+ +V R + G WTG +GLID +G EV + Y Sbjct: 174 LQVEIHNVFIDMVKMRRGAKLKGDETVFSGLFWTGMRGLDLGLIDGLGDMREVLRRRYG 232 >gi|120554791|ref|YP_959142.1| peptidase S49 [Marinobacter aquaeolei VT8] gi|120324640|gb|ABM18955.1| peptidase S49 [Marinobacter aquaeolei VT8] Length = 349 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 8/200 (4%) Query: 37 HVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A + + G ++ + L+ + +S+ A+++ ++SPGGS ++ I+ Sbjct: 98 HTALVEVNGPIAADELASADNLVGALRAAFEAESSKAVVLRINSPGGSPVQSGYVYDEIK 157 Query: 92 KVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ P + + ++ AS Y I+ A++ I A SLVGSIGV+ ++K+ Sbjct: 158 RLREEYPDKKIYAVISDIGASGAYYIAAAADEIYANRASLVGSIGVVAGGFGFTEAMEKI 217 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + + KA PFS + V Q V+++++ F+ V + R L Sbjct: 218 GVDRRLYTAGDNKAFLDPFSPEQEEEVAFWQSVLENTHKQFIEAVRQGRGDRLADDPRLF 277 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 G +W+G +A ++GL+D +G Sbjct: 278 SGLVWSGEQAVELGLVDGLG 297 >gi|302842395|ref|XP_002952741.1| signal peptide peptidase [Volvox carteri f. nagariensis] gi|300262085|gb|EFJ46294.1| signal peptide peptidase [Volvox carteri f. nagariensis] Length = 799 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 1/196 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I ++ +++D S A+++ + SPGG A + + ++R I+++ KPVI + ++AAS GY Sbjct: 470 VIPKLRALAKDKSVAAVVLRIDSPGGDALSADLMWREIRQLDAVKPVIASMADVAASGGY 529 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ A+ IVA ++ GSIGV+ + K+G + + S N Sbjct: 530 YMAMAARAIVAEPLTITGSIGVVTGKFNLSELYCKIGYNKVLLSWGRYALLLSDIKGFNE 589 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QE 231 + ++ +Y F + SR + + ++ GR+W+G AK+V L+D VGG + Sbjct: 590 EEEKLFDASAQHAYESFRNKAALSRGMEPEVMEEVAQGRVWSGLAAKEVELVDAVGGIHK 649 Query: 232 EVWQSLYALGVDQSIR 247 + + +A G+ + R Sbjct: 650 AISLARHAAGIPEGER 665 >gi|255263417|ref|ZP_05342759.1| peptidase S49 [Thalassiobium sp. R2A62] gi|255105752|gb|EET48426.1| peptidase S49 [Thalassiobium sp. R2A62] Length = 264 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 4/166 (2%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIV 122 SA AL+++ SPGGS I I+++ K PV V ++AAS GY ++ A++ I Sbjct: 49 SAVALVIN--SPGGSPVQSSLIGARIRRLSQEKDIPVFAFVEDVAASGGYWLASAADEIF 106 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +S+VGSIGV+ + + + GV + + K+ PF P V+ ++ ++ Sbjct: 107 VDPSSVVGSIGVISAGFGLNEAIGRYGVERRVYTAGKSKSMLDPFQAEKPADVKRLKGML 166 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ F VSE R D+T L G IW GA + +VGL D VG Sbjct: 167 EQIHNSFKSHVSERRAGKLDETQDLFTGEIWVGAASIEVGLADAVG 212 >gi|226363309|ref|YP_002781091.1| S49 family peptidase [Rhodococcus opacus B4] gi|226241798|dbj|BAH52146.1| putative S49 family peptidase [Rhodococcus opacus B4] Length = 288 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 3/197 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITE 102 G++ ++ + E + R S A A+ + ++SPGGS E I I+++ ++ PV+ Sbjct: 45 GRVLSAESVEEPLRRASTTHGAKAVALLINSPGGSPTQSEYIAARIRQLATEHELPVLAF 104 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ++ AS GY ++CA++ I A TS+VGS+GV+ +D+LG+ + + KA Sbjct: 105 CEDVVASGGYWLACAADEIYATATSVVGSVGVISAGFGFSELIDRLGIERRLHSAGEAKA 164 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKV 221 PF + VQ ++ + + + F V R L DG +W G A ++ Sbjct: 165 RLDPFFAEKSEDVQWLEQIQEGIHDEFRDWVVGRRGDKLKAAEAELFDGDVWLGRRAVEL 224 Query: 222 GLIDVVGGQEEVWQSLY 238 G++D +G EV + + Sbjct: 225 GIVDGIGTLREVVEKRF 241 >gi|330810999|ref|YP_004355461.1| peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379107|gb|AEA70457.1| putative peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 329 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 13/240 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIER 59 K + Y+ ++L T + S V S + A I I G I D + ++ + Sbjct: 45 FKLLTFTYLFVALALFTPLMDMEKSAVA-GSAYTALINIEGMIADKEPASADNIVGSLRA 103 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D +++ ++SPGGS ++ I +++ P V + ++ AS Y I+ Sbjct: 104 AFEDSKVKGVVLRINSPGGSPVQSGYVYDEIVRLRALHPDIKVYAVISDLGASGAYYIAS 163 Query: 117 ASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV Y +V ++KLGV + S K+ PF P+ Sbjct: 164 AADQIYADKASLVGSIGVTAAGYGFVGT-MEKLGVERRVYTSGEHKSFLDPFQPQKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+D+++ F+ V + R + + L G +W+G +A +GLID +G V Sbjct: 223 AFWQSVLDTTHKQFIASVKKGRGERLKDKEHPELFSGLVWSGEQALPLGLIDGLGSASSV 282 >gi|99082363|ref|YP_614517.1| peptidase S49 [Ruegeria sp. TM1040] gi|99038643|gb|ABF65255.1| peptidase S49 [Ruegeria sp. TM1040] Length = 265 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 3/201 (1%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--P 98 +A RG + DS L +ER A+ + ++SPGGS I I+++ + P Sbjct: 25 MAGRGSLNDST-LAPVLERAFTKGKPKAVALEINSPGGSPVQSALIGARIRRLAEERDVP 83 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 VI V ++AAS GY ++ A++ I A +S+VGSIGV+ FL + G+ + + Sbjct: 84 VIAFVEDVAASGGYWLAAAADEIYADASSVVGSIGVISAGFGAHVFLARQGLERRVHTAG 143 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ PF N + V ++ +++ + F+ V++ R L G IW A Sbjct: 144 ESKSMLDPFRPENEEDVARLKGLLNDIHANFIDHVTDRRGEKLSTEEKLFTGEIWLARRA 203 Query: 219 KKVGLIDVVGGQEEVWQSLYA 239 K++GLID +G V Q + Sbjct: 204 KELGLIDGIGHLRPVLQERFG 224 >gi|254501444|ref|ZP_05113595.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] gi|222437515|gb|EEE44194.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] Length = 285 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 4/176 (2%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A ALIV+ SPGGS IF+ I+ + +N K V+ V ++AAS GY+I+ A + I+ Sbjct: 59 AVALIVN--SPGGSPVQSRLIFQRIRDLAKENEKDVLVFVEDVAASGGYMIALAGDEIIV 116 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ + K+GV + + K PF P+ ++ ++ + Sbjct: 117 DPSSVVGSIGVVAAGFGFTELIGKIGVERRVYTAGEKKVTLDPFQPEVPEDIEYLKTLQQ 176 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F+ +V R L G+ WTG A +GL+D +G V + Y Sbjct: 177 EIHDTFIDMVKSRRADVLSDEPDLFTGKFWTGTSAVNLGLVDSLGDLRGVLKKRYG 232 >gi|319792205|ref|YP_004153845.1| peptidase s49 [Variovorax paradoxus EPS] gi|315594668|gb|ADU35734.1| peptidase S49 [Variovorax paradoxus EPS] Length = 343 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 10/204 (4%) Query: 34 NSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + H A + I+G+I ++ ++ ++ D+ A +++ ++SPGGS I Sbjct: 89 TTAHTAVVEIKGEIAAGGDASAEFVVAAMKTAFEDEGAKGVVLLINSPGGSPVQAGIIND 148 Query: 89 AIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ K K++KPV V E ASA Y I+ ++ I + S+VGSIGVL +D Sbjct: 149 EIKRLKAKHKKPVYAVVEETCASAAYYIAAGADKIFVDKASIVGSIGVLMDGFGFTGVMD 208 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKT 204 K+GV + + + K PFS ++ Q +++ + F+ +V R + D T Sbjct: 209 KVGVERRLLTAGENKGFLDPFSPMSDAQRAHAQTMLNQIHAQFINVVKTGRGDRLKLD-T 267 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 L G W+G +A + GL D +G Sbjct: 268 PGLFSGLFWSGEQAVEYGLADQLG 291 >gi|86157564|ref|YP_464349.1| signal peptide peptidase A [Anaeromyxobacter dehalogenans 2CP-C] gi|85774075|gb|ABC80912.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Anaeromyxobacter dehalogenans 2CP-C] Length = 834 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 1/161 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFR-AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + S GG A + I+R A++ + KPVI + ++AAS GYL++ ++ I+A ++ Sbjct: 590 IVLRIESGGGDGLASDLIWREAVRARRKGKPVIASMGDLAASGGYLVAVGADAILAERST 649 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIGV P + L KL + ++ + S +++ + + Y Sbjct: 650 LTGSIGVFAAKPDLSGLLAKLSIHPEAYQRGENARLASVLKPWTAAERAVLEKQISAFYR 709 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 FV V+E R + + ++ GR+WTG +A + L+D +G Sbjct: 710 QFVARVAEGRRLTAAEVEAVAGGRVWTGQQALERRLVDRIG 750 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 9/188 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAAS 109 L+ R+E D AL+V + GG G E + + V+ RKPV+ + E + Sbjct: 328 LVTRLEAARDDPEVGALLVRI---GGLPLGGGRVEELRALLAAVRARKPVLAYL-EGGGT 383 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK--AEPSPF 167 Y ++ + I A + + G+ +++ L +LG++ VK+ K AEP Sbjct: 384 REYWLATGATAIAAPPGAPLIVNGISTSQLFLRGGLARLGIAFDVVKAGAYKSAAEPLVR 443 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +P+A + + V+D + FV V+E+R +P ++ L D ++ EAK+ GL+D+V Sbjct: 444 DAPSPEAREATEAVLDDVFGRFVAQVAEARRLPPERVRALVDQGLFGAEEAKEAGLLDLV 503 Query: 228 GGQEEVWQ 235 +E+ Q Sbjct: 504 AWPDELEQ 511 >gi|77164361|ref|YP_342886.1| putative periplasmic protease [Nitrosococcus oceani ATCC 19707] gi|254433532|ref|ZP_05047040.1| peptidase family S49 N-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882675|gb|ABA57356.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Nitrosococcus oceani ATCC 19707] gi|207089865|gb|EDZ67136.1| peptidase family S49 N-terminal domain protein [Nitrosococcus oceani AFC27] Length = 325 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 85/159 (53%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + +++++ ++ P+I V ++AAS GY+++C N I+AA + Sbjct: 122 ILLRLESGGGLVHEYGLAASQLERIRKKQIPLIIAVDKIAASGGYMMACVGNRIIAAPFA 181 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIG L Q P LDK G+ + +K+ +K + F + ++ + V+ + Sbjct: 182 IIGSIGALMQVPNFHRLLDKHGIDFEQIKAGELKRTVTLFGINTDQDRELAKKQVEDIHQ 241 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R ++ +T + G+ W +AKK+ LID Sbjct: 242 LFKEFVARYRPDMDLSQT---ATGQHWHAIQAKKLNLID 277 >gi|154251181|ref|YP_001412005.1| peptidase S49 [Parvibaculum lavamentivorans DS-1] gi|154155131|gb|ABS62348.1| peptidase S49 [Parvibaculum lavamentivorans DS-1] Length = 300 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 12/202 (5%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASN 119 R+ A AL+++ SPGGS I++ I+ + K PV ++AAS GY+I+CA++ Sbjct: 62 RNVKAVALLIN--SPGGSPVQSSLIYKRIRALAEEKSVPVYAFAEDVAASGGYMIACAAD 119 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A E+S+VGSIGV+ ++KLGV + + KA PF + V+ ++ Sbjct: 120 EIYADESSIVGSIGVVSAGFGFTGLIEKLGVERRVHTAGESKAMLDPFQPEREEDVRRLE 179 Query: 180 DVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + F +LV +R + D + S G W G A + GLID +G +SL Sbjct: 180 ALQLDVHENFKKLVRGARGERLKADDPAIFS-GEFWAGQGAVERGLIDGLGDVRSKMRSL 238 Query: 238 YALGVDQSIRKIKDWNPPKNYW 259 + V K++ +P +W Sbjct: 239 FGENV-----KLRLVSPRTPWW 255 >gi|194444766|ref|YP_002040970.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403429|gb|ACF63651.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 348 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|261415381|ref|YP_003249064.1| signal peptide peptidase SppA, 36K type [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371837|gb|ACX74582.1| signal peptide peptidase SppA, 36K type [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327693|gb|ADL26894.1| signal peptide peptidase SppA domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 764 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 111/210 (52%), Gaps = 15/210 (7%) Query: 33 DNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 ++ VA + I G I+ E +++ + R+ AL+V +SSPGGSA A + I+ A+ Sbjct: 501 NHRAKVALLNINGTIDSRMEESVLDNLRRLP-GMGVKALLVRISSPGGSAIASDKIWGAL 559 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + ++ P++ + S Y I+C ++ I+A ++VGSIG+ + K+G Sbjct: 560 KNLRRFDIPIVASIGSSGTSGAYYIACGADKIIAEPFAIVGSIGIYGGKIDASGLMQKVG 619 Query: 150 VSIKSVKS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + + VK+ S ++ P+++ A +Q+ +D Y+ F +VS++ I D+ +V Sbjct: 620 LRNEPVKTNDYSDARSFARPWTDTEKAA---LQEYMDDFYNRFTGVVSQATGI--DQAVV 674 Query: 207 LS---DGRIWTGAEAKKVGLIDVVGGQEEV 233 S GR+ G +AK+ GL+ +GG ++ Sbjct: 675 DSVYGGGRVMVGWKAKEAGLVHSLGGFDDA 704 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLIS 115 E + RD +A +++ S G+ E I R ++K+K R VI + ++ S +++ Sbjct: 284 FEHLLRDPAAGLVVLDFSGYNGNLAISEEINRYVKKLKARGGLVIAYMDDVRPS---VLT 340 Query: 116 CASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 A+N+ +V ++ +G+ + K LDKLGV ++ ++ K+ P++ Sbjct: 341 AAANVDRVVVEPSAHFTWLGLGGGITFYKGILDKLGVKVEFLRHGAFKSAVEPYT 395 >gi|157145601|ref|YP_001452920.1| putative periplasmic protease [Citrobacter koseri ATCC BAA-895] gi|157082806|gb|ABV12484.1| hypothetical protein CKO_01347 [Citrobacter koseri ATCC BAA-895] Length = 351 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 87/166 (52%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q++++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VVVRLESPGGVVHGYGLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 199 IVGSIGVVAQIPNFNRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHH 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +A + GL+D + ++V Sbjct: 259 LFKHFVQQMR--PVLDIEQVATGEHWYGQQALEKGLVDEINTSDDV 302 >gi|255029400|ref|ZP_05301351.1| U7 family peptidase [Listeria monocytogenes LO28] Length = 131 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 2/119 (1%) Query: 120 IIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 I A++ +L GS+GV+ Q Y Y + + KLGVS ++KS K S + ++M Sbjct: 9 INFASKETLTGSLGVIMQGYDYSE-LMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIM 67 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D SY+ FV++V++ R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 68 QSMIDDSYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 126 >gi|224583792|ref|YP_002637590.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468319|gb|ACN46149.1| putative protease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 348 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|213424433|ref|ZP_03357246.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 342 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 131 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 190 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 191 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 250 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 251 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 293 >gi|16760164|ref|NP_455781.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765060|ref|NP_460675.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142065|ref|NP_805407.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180283|ref|YP_216700.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613795|ref|YP_001587760.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549776|ref|ZP_02343534.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993770|ref|ZP_02574863.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230154|ref|ZP_02655212.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237768|ref|ZP_02662826.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241294|ref|ZP_02666226.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260063|ref|ZP_02682036.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462810|ref|ZP_02696741.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819538|ref|ZP_02831538.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194449361|ref|YP_002045763.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469745|ref|ZP_03075729.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735219|ref|YP_002114748.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247759|ref|YP_002146310.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265745|ref|ZP_03165819.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243766|ref|YP_002215425.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204927734|ref|ZP_03218935.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352610|ref|YP_002226411.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|213582175|ref|ZP_03364001.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647994|ref|ZP_03378047.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855228|ref|ZP_03383468.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238911892|ref|ZP_04655729.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25512261|pir||AD0654 probable protease STY1334 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420246|gb|AAL20634.1| putative peptidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502458|emb|CAD08415.1| putative protease [Salmonella enterica subsp. enterica serovar Typhi] gi|29137694|gb|AAO69256.1| putative protease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62127916|gb|AAX65619.1| putative peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363159|gb|ABX66927.1| hypothetical protein SPAB_01529 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194407665|gb|ACF67884.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456109|gb|EDX44948.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710721|gb|ACF89942.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634032|gb|EDX52384.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211462|gb|ACH48859.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197244000|gb|EDY26620.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289292|gb|EDY28659.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938282|gb|ACH75615.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204323076|gb|EDZ08272.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272391|emb|CAR37271.1| putative protease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205325030|gb|EDZ12869.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328266|gb|EDZ15030.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335298|gb|EDZ22062.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339594|gb|EDZ26358.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343732|gb|EDZ30496.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205351232|gb|EDZ37863.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246906|emb|CBG24723.1| putative protease [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993661|gb|ACY88546.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158244|emb|CBW17743.1| putative protease [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912709|dbj|BAJ36683.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085785|emb|CBY95561.1| putative protease [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224347|gb|EFX49410.1| putative protease sohB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614975|gb|EFY11900.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621431|gb|EFY18285.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623227|gb|EFY20069.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628517|gb|EFY25305.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633681|gb|EFY30421.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638511|gb|EFY35206.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640819|gb|EFY37468.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645317|gb|EFY41845.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651800|gb|EFY48172.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654303|gb|EFY50625.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322662730|gb|EFY58937.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667659|gb|EFY63819.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671927|gb|EFY68048.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677027|gb|EFY73091.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680311|gb|EFY76350.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685260|gb|EFY81256.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714757|gb|EFZ06328.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129988|gb|ADX17418.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195430|gb|EFZ80609.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199319|gb|EFZ84413.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204777|gb|EFZ89773.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205927|gb|EFZ90890.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323220715|gb|EGA05160.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225564|gb|EGA09792.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232116|gb|EGA16223.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234643|gb|EGA18730.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238095|gb|EGA22154.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243301|gb|EGA27320.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248442|gb|EGA32377.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252548|gb|EGA36391.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255427|gb|EGA39193.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260829|gb|EGA44431.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267584|gb|EGA51067.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270950|gb|EGA54386.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623172|gb|EGE29517.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627673|gb|EGE34016.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988605|gb|AEF07588.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 348 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|163741908|ref|ZP_02149297.1| peptidase, family S49 [Phaeobacter gallaeciensis 2.10] gi|161384629|gb|EDQ09009.1| peptidase, family S49 [Phaeobacter gallaeciensis 2.10] Length = 265 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS----AYAGEAIFRAIQKVKNR 96 +A RG + D+ L +ER R A+ ++SPGGS A G + R +++K Sbjct: 25 MAGRGALNDAA-LGPVLERAFRKGKPAAVAFEINSPGGSPVQSALIGARVRRLSEELK-- 81 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 P I V ++AAS GY ++ +++ I A E+S++GSIGV+ FL + GV + Sbjct: 82 VPTIAFVEDVAASGGYWLAASADEIWADESSILGSIGVISAGFGAHVFLARQGVERRVYT 141 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K+ PF N + V+ ++ ++ + F+ V + R D + L G IW G Sbjct: 142 AGRSKSMLDPFRPENAEDVKRLKQLLGDIHDNFIAHVKDRRGDKLDTSEDLYTGEIWLGR 201 Query: 217 EAKKVGLIDVVG 228 A +GLID +G Sbjct: 202 RAVSLGLIDGIG 213 >gi|299469968|emb|CBN79145.1| signal peptide peptidase [Ectocarpus siliculosus] Length = 915 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 98/174 (56%), Gaps = 2/174 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNII 121 D S ++V +SSPGG A A + ++R +++++ + K V+ V ++AAS GY I+ I Sbjct: 503 DKSIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERI 562 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 V E S+ GSIGV+ + L+K+G++ + + S S + + Sbjct: 563 VCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSARSFTAEEDAYFGRGA 622 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +SY+ FV ++SR +P + + GR+WTGAEAK++GL+D +GG ++ + Sbjct: 623 M-ASYNDFVGKAAKSRRMPLEDMQRRAQGRVWTGAEAKELGLVDDLGGLDKAIE 675 >gi|294783430|ref|ZP_06748754.1| protease IV [Fusobacterium sp. 1_1_41FAA] gi|294480308|gb|EFG28085.1| protease IV [Fusobacterium sp. 1_1_41FAA] Length = 578 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 23/232 (9%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPG 77 +E+++ V I + G I +SQ E I ++ + A+++ ++SPG Sbjct: 298 LENSNNIVYVIPLEGDIVESQTEIFSGEAAINVNETIAKLNTAKENKKIKAVVLRVNSPG 357 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA + I ++++ + KPV + +AAS GY IS +N I ++ GS+GV+ Sbjct: 358 GSALTSDIIAEKVKELASEKPVYVSMSSIAASGGYYISANANKIYVDRNTVTGSVGVVSV 417 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS---YHWFVRLVS 194 L GV+++ + + E S + + + +S+ Y F+ +VS Sbjct: 418 LVDYSSLLKDNGVNVEKIS----EGEYSDLYSADTFTEKKYNKIYNSNLKVYEDFLNVVS 473 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + R I +K L++GR+WTG EA K GL D +GG ++ ++Y + D +I Sbjct: 474 KGRKIDKEKLKELAEGRVWTGTEAVKNGLADEIGG---IYSTIYGVTEDNNI 522 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 16/216 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG 111 L+E I+ IS DD + +++ ++S S E + + ++ K VI + Sbjct: 85 LLENIKNISFDDKVSGVVLKINSNSLSYAQSEELAHELSMLRGADKKVIAYFENVNRKNY 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 YL S A I + + S +I F+ Y K DK GV + K+ ++ Sbjct: 145 YLASYADEIYMPSANSTSVNIYPYFREEFYTKKLSDKFGVKFNIIHVGDYKSYQENLAKD 204 Query: 170 -VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVG--LID 225 ++ +A + ++D +Y F+ +VS +R + D ++ DG + + LID Sbjct: 205 SMSKEAREDSTRILDLNYENFLDIVSLNRKLNRDDLDKIIKDGDLVAASSIDLFSNKLID 264 Query: 226 VVGGQEEVWQSLYAL--GVDQSIRKIKDWNPPKNYW 259 + W +L L G D+ I I+D+ KNY+ Sbjct: 265 ----KYLYWDNLVTLLGGKDKLIS-IQDY--AKNYY 293 >gi|207856771|ref|YP_002243422.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708574|emb|CAR32895.1| putative protease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 348 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|56413358|ref|YP_150433.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362282|ref|YP_002141919.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127615|gb|AAV77121.1| putative protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093759|emb|CAR59233.1| putative protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 348 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|57641099|ref|YP_183577.1| endopeptidase IV [Thermococcus kodakarensis KOD1] gi|57159423|dbj|BAD85353.1| predicted endopeptidase IV, S49 family [Thermococcus kodakarensis KOD1] Length = 334 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 115/226 (50%), Gaps = 7/226 (3%) Query: 38 VARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +A + I G I+D + ++I + ++ ++S +++ + SPGG I I+K+ Sbjct: 89 IAVVPIFGIIDDYTALQVIPLLRNLAMNESVGGVLLWIESPGGVVGPVINIHSEIKKLSL 148 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ ++ AS GY I+ + IVA+ + VGSIGV++ + ++ + G+ + Sbjct: 149 VKPVVAYSGDIIASGGYYIAVGAQKIVASPLAEVGSIGVIYVHYDLEKNYEMNGIKVNVF 208 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ K + + ++ P+ + + ++V++ + F+ VSE RN+ D+ S G W Sbjct: 209 KTGKHKDMGAEWRDLTPEEREKITEMVNTYFQAFISAVSEGRNMTIDEVKNFSTGETWF- 267 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI---KDWNPPKNY 258 AE L+D +GG + L L ++ S K+ KD P+ + Sbjct: 268 AENVTGALVDELGGMDTAIDVLEKL-MNVSGAKVVVYKDLETPEEF 312 >gi|224437564|ref|ZP_03658522.1| hypothetical protein HcinC1_06345 [Helicobacter cinaedi CCUG 18818] gi|313144017|ref|ZP_07806210.1| protease IV [Helicobacter cinaedi CCUG 18818] gi|313129048|gb|EFR46665.1| protease IV [Helicobacter cinaedi CCUG 18818] Length = 267 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 112/218 (51%), Gaps = 3/218 (1%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 E++ P+VA++ + I +S+ + +++I +++ +++ + SPGG A I I+ Sbjct: 16 ENDPPNVAKLHLTMPIYESESFAQAVKKIKENENIKGVLLVIDSPGGLVGASIEIADMIK 75 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + + PVI V AS Y +N I A +L+GS+GV+F ++ + K+GV Sbjct: 76 DLAQKMPVIAYVQGSMASGSYYAGMYANEIYANRGALIGSVGVIFSGVNIEELMQKVGVK 135 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSD 209 + +K+ K + + + + Q +++++ Y F V ++R + ++ Sbjct: 136 EQGIKAGAFKEIGTMTRKWSDEERQFLENLLQEQYAMFYNDVLQARGEKLKSKDYHDFAE 195 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSI 246 G++++ +A ++GLID V + ++L +G+D+ I Sbjct: 196 GKVFSANKALELGLIDKVESMQGAMEALRQKVGLDKLI 233 >gi|271500646|ref|YP_003333671.1| Peptidase S49 domain-containing protein [Dickeya dadantii Ech586] gi|270344201|gb|ACZ76966.1| Peptidase S49 domain protein [Dickeya dadantii Ech586] Length = 348 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ R +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRIRQRGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + + ++ ++ Sbjct: 196 IVGSIGVVAQIPNFNRLLKNKDIDVELHTAGQYKRTLTLFGENTDEGREKFRQELNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + VSE R P ++ G W G +AK +GL+D +G +++ Sbjct: 256 LFKQFVSEMR--PSLDIESVATGEHWFGTQAKDMGLVDAIGTSDDL 299 >gi|134096734|ref|YP_001102395.1| signal peptide peptidase [Saccharopolyspora erythraea NRRL 2338] gi|291008456|ref|ZP_06566429.1| signal peptide peptidase [Saccharopolyspora erythraea NRRL 2338] gi|133909357|emb|CAL99469.1| possible signal peptide peptidase [Saccharopolyspora erythraea NRRL 2338] Length = 298 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 12/196 (6%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V+R I Q +S + R D +A+++S++SPGG+ + I+++ + K Sbjct: 51 VSRSTISAQTTESA-----LTRAFGHDRLSAVVLSINSPGGAPTQSALVADRIRELADEK 105 Query: 98 --PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV+ ++AAS GY ++CA++ I A +TS+VGS+GV+ LD+ GV + Sbjct: 106 KVPVLAFCEDVAASGGYWLACAADEIHAHQTSMVGSVGVVSATFGFNGLLDRFGVERRVY 165 Query: 156 KSSPMKAEPSPFS---EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + K PFS E + + + +Q + + +VR R D+ L G + Sbjct: 166 TAGDHKVRLDPFSPEKEDDVRWLHGLQAELHDQFQQWVRDRRGERLKGTDEELF--SGEV 223 Query: 213 WTGAEAKKVGLIDVVG 228 ++GA+A ++GL+D VG Sbjct: 224 YSGAKALELGLVDGVG 239 >gi|186471872|ref|YP_001863190.1| peptidase S49 [Burkholderia phymatum STM815] gi|184198181|gb|ACC76144.1| peptidase S49 [Burkholderia phymatum STM815] Length = 311 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 5/168 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DDS +++ + SPGGS Y + + I K + +K ++ + +AASA + I ++ Sbjct: 108 DDSIGGVLIDVDSPGGSVYGVQELGDEIYKARGQKLIVACANSLAASAAFWIGSSAGEFY 167 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 GSIGV + L+K GV + + K E +P+ ++ +A MQ V Sbjct: 168 VTPGGEAGSIGVFAAHENWAAALEKAGVEATLISAGKYKTEGNPYGPLSEEARTFMQSRV 227 Query: 183 DSSYHWFVRLVSESRNIPYDKTLV---LSDGRIWTGAEAKKVGLIDVV 227 DS Y F R V +RN D V + +GR+ +EAK ++D V Sbjct: 228 DSYYGAFTRAV--ARNRGTDVATVRGGMGEGRVLGASEAKAANMVDDV 273 >gi|262276077|ref|ZP_06053886.1| SohB protein peptidase U7 family [Grimontia hollisae CIP 101886] gi|262219885|gb|EEY71201.1| SohB protein peptidase U7 family [Grimontia hollisae CIP 101886] Length = 352 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 10/207 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIF 87 + PHV + +G I D++E+ E ++ + ++V L S GG +A Sbjct: 100 QSRKPHVFVVDFKGSI-DAREVASLREEVTAILAVAKAGDEVLVRLESGGGMVHAYGLAS 158 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L Sbjct: 159 SQLDRIKQAGIPLTVAVDKVAASGGYMMACVADKIVAAPFAVVGSIGVIAQLPNFNKLLK 218 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTL 205 K + + + + K + F E KA + ++ ++ F + +++ R ++ +K Sbjct: 219 KHDIEFEQLTAGEFKRTLTMFGENTDKAREKFLTELEETHALFKQFIADHRPSLDLEK-- 276 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ G W G +A +GLID +G ++ Sbjct: 277 -VATGEHWFGNQALPLGLIDSIGTSDD 302 >gi|282891036|ref|ZP_06299541.1| hypothetical protein pah_c045o044 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499029|gb|EFB41343.1| hypothetical protein pah_c045o044 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 344 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 8/219 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAA 108 Q+LIE E ++ A+ + +++PGG+ + + I+R+++ K PV V + A Sbjct: 91 QQLIESREGTLSNNRVKAIFLEINTPGGTVFDADGIYRSLKAYKKEFDVPVFAYVDGLCA 150 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S G ++ A++ + A++ SLVGS+GV+ Y + LDK+GV ++ + K E +P Sbjct: 151 SGGMYVASAADKVYASDVSLVGSVGVITSSYLNLSQLLDKIGVQSLTLSAGKGKDELNPL 210 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDV 226 P MQ +++ Y FV +V+ +R + LV G ++ EA G ID Sbjct: 211 RPWKPGEQDKMQGLINFYYQHFVGVVTANRPQLNKEKLVDEYGASVFPADEAFAKGYIDG 270 Query: 227 VGGQ--EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 G E + L +G++ ++ + KN WF + Sbjct: 271 SGFSRGEALKALLKQIGIEDDFYQVMKFQ-GKN-WFSQI 307 >gi|262373137|ref|ZP_06066416.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] gi|262313162|gb|EEY94247.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] Length = 345 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 22/256 (8%) Query: 17 LVTLTVVYFSWSSHVED-----NSPHVARIAIRGQIE--------DSQELIERIERISRD 63 L+ L + S S+ E +S H+A + I G I+ +S++ + ++R Sbjct: 61 LIVLIAMSKSCSTTTEKATTSISSDHLAVVDIIGTIDSSSSQSAVNSEDTNKALKRAFEA 120 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNI 120 + A+ ++++SPGGS + I++ I+ +K + P V + +M AS Y I+ A++ Sbjct: 121 SGSKAIALNINSPGGSPVQSDEIWQEIRYLKKQYPAKKVYAVIGDMGASGAYYIASAADE 180 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+ +SLVGSIGV+ + KLG+ +++ S K S +NP +Q Sbjct: 181 IIVNPSSLVGSIGVIMPNYGLSGLTQKLGIEDRTLTSGNNKDILSMTKPINPTQQAHVQS 240 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+D+ + F+ V E R + + + S G W+G +A +G+ D G + + L Sbjct: 241 VLDNVHSHFINAVKEGRGKRLKSNDPAIFS-GLFWSGEQAIALGVADRSGSLTTLMRDLK 299 Query: 239 ALGVDQSIRKIKDWNP 254 V+Q + NP Sbjct: 300 ---VEQKVDYTVQHNP 312 >gi|323526878|ref|YP_004229031.1| peptidase S49 [Burkholderia sp. CCGE1001] gi|323383880|gb|ADX55971.1| peptidase S49 [Burkholderia sp. CCGE1001] Length = 321 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 8/200 (4%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A IA+ G+I +++++ +E D +I+ +SPGGS I+ ++ Sbjct: 69 HTALIALDGEISADTRANAEDISAALESAFEDAGTAGVILRCNSPGGSPVQAGIIYEEMR 128 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + P I V +M AS GY + A + I + S+VGSIGVL +DKL Sbjct: 129 RLRAKHPSIPLYVVVGDMCASGGYYAAAAGDKIYVDKASIVGSIGVLMDSFGFTGLMDKL 188 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + S K PFS PK Q Q+++D + F+ V + R +T + Sbjct: 189 GIQRRLHTSGENKGFYDPFSPETPKMDQHAQEMLDQIHGQFIDAVRQGRGKRLHETADMF 248 Query: 209 DGRIWTGAEAKKVGLIDVVG 228 G WTG ++ ++GL D G Sbjct: 249 SGLFWTGQKSVELGLADGFG 268 >gi|296537377|ref|ZP_06899233.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] gi|296262298|gb|EFH09067.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] Length = 271 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 27/222 (12%) Query: 33 DNSPHVAR------IAIRG--------QIEDSQELIERIERISRDDSATALIVSLSSPGG 78 D P VA IA RG +E ++ER + R +++ ++SPGG Sbjct: 13 DRGPRVALVRLSGLIAARGGGIGPAGLSLEGVAPVLERAFALKR---LAGVVLVINSPGG 69 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S I I+ + K PVI V + AAS GY ++CA++ IVA +S+VGSIGV+ Sbjct: 70 SPVQSSLIAARIRALAEEKKVPVIACVEDAAASGGYWLACAADEIVADPSSIVGSIGVIS 129 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ KLGV + + K+ PF V P +++++ + + F V Sbjct: 130 ASFGLEELAAKLGVERRLTTAGGQKSFLDPFRPVEPWQQARLEELLSALHEEFKAWVRSR 189 Query: 197 R----NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEV 233 R P + L +GR WTG EA +GLID +G Q E+ Sbjct: 190 RAAHLAAPEE---ALFNGRFWTGREALPLGLIDRLGNAQSEI 228 >gi|307730546|ref|YP_003907770.1| peptidase S49 [Burkholderia sp. CCGE1003] gi|307585081|gb|ADN58479.1| peptidase S49 [Burkholderia sp. CCGE1003] Length = 334 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 8/209 (3%) Query: 37 HVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A IA+ G+I +++++ +E D +I+ +SPGGS I+ ++ Sbjct: 82 HTALIALDGEISADTRANAEDVAAALESAFDDAGTAGVILRCNSPGGSPVQAGIIYDQMR 141 Query: 92 KVKNRKPVI---TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ + P I V +M AS GY + A + I + S+VGSIGVL +DKL Sbjct: 142 RLRAKHPSIPLYVVVGDMCASGGYYAAAAGDKIYVDKASIVGSIGVLMDSFGFTGLMDKL 201 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + S K PFS PK Q Q+++D + F+ V + R +T + Sbjct: 202 GIQRRLHTSGENKGFYDPFSPETPKMDQHAQEMLDQIHAQFIEAVRQGRGKRLHETPDMF 261 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G WTG ++ ++GL D G V + L Sbjct: 262 SGLFWTGEKSVELGLADGFGDANYVAREL 290 >gi|330818852|ref|YP_004351069.1| signal peptide peptidase SppA, 36K type [Burkholderia gladioli BSR3] gi|327374394|gb|AEA65746.1| signal peptide peptidase SppA, 36K type [Burkholderia gladioli BSR3] Length = 318 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNII 121 D A+ + + S GGS E I A+ +K + KPVI ++ + ASA YL++ S+ + Sbjct: 99 DKVRAIALMIDSGGGSPIDAERIDDALAALKKQHPKPVIAVINSLGASAAYLVAMHSDEV 158 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A SLVGSIG + + L ++ V + S +KA +P+ P A Q + Sbjct: 159 MAGRFSLVGSIGAVIESWDFSGALGRVDVKQRVYASGALKAMLNPYIPATPAADDKAQAL 218 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+ F+ + +R K + G +W G AK++GL+D VG E++ Sbjct: 219 VNVLAGEFLGELERTRGAKLSKDVKYDTGEVWDGEAAKRIGLVDTVGTIEDL 270 >gi|289829092|ref|ZP_06546772.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 317 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|227821040|ref|YP_002825010.1| putative peptidase [Sinorhizobium fredii NGR234] gi|227340039|gb|ACP24257.1| putative peptidase [Sinorhizobium fredii NGR234] Length = 288 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ +S++SPGGS I++ I+ + + +K V+ V ++AAS GY+I+ A + I+A Sbjct: 58 APAVAISVNSPGGSPVQSRLIYQRIRDLADEKKKRVLIFVEDVAASGGYMIALAGDEIIA 117 Query: 124 AETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 +S+VGSIGV+ F +P + L K+GV + + K PF + V+ ++ Sbjct: 118 DPSSIVGSIGVVSGGFGFPEL---LKKVGVERRVYTAGENKVVLDPFQPEKERDVEFLKS 174 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + F++LV R + G WTG +++GL+D +G Sbjct: 175 LQLDIHDTFIQLVKARRGSMLADHPDIFSGLFWTGRRGQELGLVDALG 222 >gi|222085058|ref|YP_002543588.1| protease protein [Agrobacterium radiobacter K84] gi|221722506|gb|ACM25662.1| protease protein [Agrobacterium radiobacter K84] Length = 286 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 8/177 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLI 114 +E+ +A A+ + ++SPGGS I+ I+ + + +K V+ V ++AAS GY+I Sbjct: 49 LEKAFEMKAAPAIALVVNSPGGSPVQSRMIYNRIRDLAQEKQKKVLVFVEDVAASGGYMI 108 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A TS+VGSIGV+ F +P L KLGV + + K PF Sbjct: 109 ALAGDEIIADATSIVGSIGVVSGGFGFP---ELLKKLGVERRVYTAGENKVILDPFQPEK 165 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 K ++ ++ + + F+ +V E R + G WTG ++GLID +G Sbjct: 166 EKDIEYLKSLQLEIHKVFIDMVRERRAGKLTDDDTVFSGLFWTGGRGLELGLIDGLG 222 >gi|290475296|ref|YP_003468184.1| putative peptidase [Xenorhabdus bovienii SS-2004] gi|289174617|emb|CBJ81411.1| putative peptidase [Xenorhabdus bovienii SS-2004] Length = 348 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIV 122 DS +++ L SPGG + + +++ + +T V ++AAS GY+++C ++ I+ Sbjct: 131 DSKDEVLLRLESPGGMVHGYGLAASQLARLRQKGIRLTIAVDKVAASGGYMMACVADRII 190 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA +++GSIGV+ Q P + L K + ++ + K + E + Q Q+ + Sbjct: 191 AAPFAIIGSIGVVAQLPNIHRLLKKNDIDVELHTAGEYKRTLTVLGENTEQGRQKFQEDL 250 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ F + + R P ++ G W G +AK+ GLID VG Sbjct: 251 NETHQLFKSFIYQHR--PSLDVEKVATGEYWYGTQAKENGLIDDVG 294 >gi|213618610|ref|ZP_03372436.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 203 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 7/145 (4%) Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS +N IVA+ ++L GSIG+ V+ L +GV V +SP+ A+ S Sbjct: 1 SGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISMTK 59 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++P+ QMMQ ++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G Sbjct: 60 ALSPEVQQMMQLSIEYGYKRFITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLG 119 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWN 253 ++ A+ + K+K W+ Sbjct: 120 DFDD------AVAKAAELAKLKQWH 138 >gi|186475587|ref|YP_001857057.1| peptidase S49 [Burkholderia phymatum STM815] gi|184192046|gb|ACC70011.1| peptidase S49 [Burkholderia phymatum STM815] Length = 336 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 12/233 (5%) Query: 7 KIKTRYVMLSLVTL---TVVYFSWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERI-- 60 +I R+V L ++ L V+ FS V + H A + + G+I D+ E I+ Sbjct: 52 RIFFRFVFLGVLVLIAWAVLDFS-GEKVATSGRHTALVTLDGEIASDTNANAEDIDMALA 110 Query: 61 -SRDDSATA-LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 + DD+ TA +++ +SPGGS I+R I++++ + P I V +M AS GY + Sbjct: 111 NAFDDAGTAGVVLRCNSPGGSPVQAGIIYREIRRLRGKYPAIPLYVVVGDMCASGGYYAA 170 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLG+ + S K PFS PK Sbjct: 171 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGIQRRMRTSGENKGFYDPFSPDTPKMD 230 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++D + F+ V + R + G WTG ++ ++GL D G Sbjct: 231 SHAQVMLDEIHAQFIDAVKQGRGKRLQDNPDIFSGLFWTGEKSVELGLADGFG 283 >gi|329894909|ref|ZP_08270708.1| peptidase S49 [gamma proteobacterium IMCC3088] gi|328922638|gb|EGG29973.1| peptidase S49 [gamma proteobacterium IMCC3088] Length = 351 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 5/180 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ L SPGG ++ + ++KN +I V +AAS GY+++C ++ I AA S Sbjct: 139 VILRLESPGGMVHSYGLAASQLDRIKNAGIKLIVSVDAVAASGGYMMACVADEIAAAPFS 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V ++ + + K + E + Q + ++S++ Sbjct: 199 VIGSIGVVAQVPNVHRLLKKNDVDVEILTAGKYKRTLTVLGENTEEGRQKFIEDLESTHD 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F V E R P ++ G IW G EA GL+D + +++ L AL Q R Sbjct: 259 LFKAFVQEHR--PNLDIEAVATGEIWYGKEAVNKGLVDRIATSDDLI--LEALQTSQVFR 314 >gi|237731714|ref|ZP_04562195.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907253|gb|EEH93171.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 351 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q++++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VVVRLESPGGVVHGYGLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 199 IVGSIGVVAQIPNFNRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHH 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A GL+D + +EV Sbjct: 259 LFKDFVHRMR--PTLDIEQVATGEHWLGQQALANGLVDEINTSDEV 302 >gi|26990583|ref|NP_746008.1| phage minor capsid protein C, putative [Pseudomonas putida KT2440] gi|24985565|gb|AAN69472.1|AE016582_10 phage minor capsid protein C, putative [Pseudomonas putida KT2440] Length = 323 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 1/157 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + SPGGSA + I+ KP+ V+ MA S GYLI+ A +V + TS Sbjct: 123 IVLDIDSPGGSAVGAFELAADIRAATKIKPITGLVNFMAYSGGYLIASACTEVVVSLTSG 182 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ + ++ +GV + +V + K + SP + +++Q++ +VV SY Sbjct: 183 VGSIGVVASHMDRSKMIEGMGVKVTTVFAGAHKNDLSPNEPITEQSLQVLNEVVQESYQL 242 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+E R ++ ++ + G+ A +GL D Sbjct: 243 FTTHVAEYRGRDV-ADIIATEAACYRGSSAIAIGLAD 278 >gi|254464567|ref|ZP_05077978.1| peptidase S49 [Rhodobacterales bacterium Y4I] gi|206685475|gb|EDZ45957.1| peptidase S49 [Rhodobacterales bacterium Y4I] Length = 279 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 8/218 (3%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + D+ L +ER R A+ + ++SPGGS I I+++ PV Sbjct: 42 RGSLSDAA-LAPILERAFRKGKPAAVALEINSPGGSPVQSSLIGARIRRLAKELGIPVYA 100 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ A++ I A +S++GS+GV+ L + GV + + K Sbjct: 101 FVEDVAASGGYWLAAAADEIWADASSVLGSVGVISAGFGAHVLLARQGVERRVYTAGESK 160 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF NP+ VQ ++ +++ + F+ V+E R L G IW A+++ Sbjct: 161 SMLDPFRPENPEDVQRLKVILNDIHANFIDHVTERRGAKLKNDENLFTGEIWLARRAEEL 220 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 GLID +G + Q + V + + + K +W Sbjct: 221 GLIDGIGHLKPKMQERFGEKV-----RFRRYGLKKPFW 253 >gi|255067016|ref|ZP_05318871.1| signal peptide peptidase SppA, 36K type [Neisseria sicca ATCC 29256] gi|255048841|gb|EET44305.1| signal peptide peptidase SppA, 36K type [Neisseria sicca ATCC 29256] Length = 329 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 116/227 (51%), Gaps = 12/227 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI----EDSQELIER-IERISRDDSAT 67 V+L L+ + ++ + V+ + H A I ++G+I +D E++ +E + + +A Sbjct: 56 VILFLMFIASLFGDDTDAVQSSGEHTAVIDLKGEIGNELDDQVEMLRTGMEAVYNNPNAK 115 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS F I+++K+ PV +M AS Y I+ A++ I A Sbjct: 116 AIIIRANSPGGSPVVSNIAFNEIRRMKSEHKDIPVYVVAEDMCASGCYYIAAAADKIYAD 175 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +S+VGSIGV+ +DK+G+ + + K PFS P Q+ + ++ Sbjct: 176 PSSVVGSIGVIGGGFDATGLMDKIGIKRRLKIAGSNKGMGDPFSPETPAQTQIWEKMLTD 235 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVG 228 + F++ V R K SD GRI+TG+EAK+VGLID G Sbjct: 236 IHKEFIKSVKLGRGKRL-KDQQYSDVFSGRIYTGSEAKEVGLIDDFG 281 >gi|33151994|ref|NP_873347.1| putative periplasmic protease [Haemophilus ducreyi 35000HP] gi|33148216|gb|AAP95736.1| putative secreted protease [Haemophilus ducreyi 35000HP] Length = 351 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ P+ V ++AAS GY+++C +N IVAA + Sbjct: 139 VLLQLESPGGVVHGYGLAASQLQRLRDHHIPLTVAVDKVAASGGYMMACVANKIVAAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ Q P + FL K + + + + K + E K Q Q ++ ++ Sbjct: 199 ILGSVGVVAQVPNIHRFLKKHEIDVDVMTAGEYKRTVTLAGENTEKGKQKFQQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F + V+ +R P + ++ G W G +A + LID + Sbjct: 259 LFKQFVANNR--PQLEIEKVATGEHWFGQQALTLNLIDEIA 297 >gi|93005622|ref|YP_580059.1| signal peptide peptidase SppA, 36K type [Psychrobacter cryohalolentis K5] gi|92393300|gb|ABE74575.1| signal peptide peptidase SppA, 36K type [Psychrobacter cryohalolentis K5] Length = 351 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 108/211 (51%), Gaps = 16/211 (7%) Query: 31 VEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ + PH+A + ++G I ++ ++ + + R ++ ++ A+ + ++SPGGS + Sbjct: 87 IDTSKPHLAVVELQGTISSGDVANAYDVNDALTRAFKNSNSKAVALDINSPGGSPVQSDE 146 Query: 86 IFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I++ + ++ P + + +M AS Y I+ A++ I +SLVGSIGV+ VK Sbjct: 147 IWQTMMDLRKEYPDKKLYAVIGDMGASGAYYIASAADEIYVNPSSLVGSIGVIMPSYNVK 206 Query: 143 PFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN- 198 +DK+GV ++ + K + P ++ K V+ V+D+++ F+ V E R Sbjct: 207 GLMDKVGVEDLTITAGEYKDILSLSRPLTDYEEKHVEK---VLDNTHKHFINAVKEGRGD 263 Query: 199 -IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + L G WTG ++ + GL D G Sbjct: 264 RLKNPEQNKLFSGLFWTGEQSIEFGLADKKG 294 >gi|328849884|gb|EGF99057.1| putative protease IV sppA [Melampsora larici-populina 98AG31] Length = 842 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 9/194 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +D +V + + G I D E +++ ++ + DDS A+++ + S GG + I Sbjct: 391 KDEVLNVGVVYVLGTIGDVGEFGTGAIVKGLKEAAEDDSIGAVVLRIDSGGGGVVESDTI 450 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP-F 144 + A++++++R KPVI AAS GYLI+ ++ I A +++ GSIGV P + P F Sbjct: 451 WGAVKELRSRGKPVIASFGNAAASGGYLIATHADSIFAMPSTITGSIGVASLRPTIMPSF 510 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 ++L ++ +S + S + E+ +A+ + +D +Y F V + R I + Sbjct: 511 FERLKLTTQSFFTGSQAL--SIYHELGDEAMSRHKTHIDLAYADFKGRVCDGRQISTELI 568 Query: 205 LVLSDGRIWTGAEA 218 L+ GR++TG +A Sbjct: 569 EKLAGGRVYTGLKA 582 >gi|83645325|ref|YP_433760.1| putative periplasmic protease [Hahella chejuensis KCTC 2396] gi|83633368|gb|ABC29335.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 345 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 7/162 (4%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +++++ R +T V ++AAS GYL++C +N I+AA S Sbjct: 134 VVVRLESPGGMVHGYGLAASQLERIRQRGVNLTVCVDKVAASGGYLMACLANKIIAAPFS 193 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ-MMQDVVDSSY 186 ++GSIGV+ Q P L K + + + + K + F E K + MQD ++ ++ Sbjct: 194 IIGSIGVVAQLPNFNRLLKKHDIDYEVLTAGEYKRTLTVFGENTEKGREKFMQD-LEETH 252 Query: 187 HWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V+ R + D+ ++ G +W GA AK + L+D + Sbjct: 253 VLFKEFVATHRPQVDIDE---VAKGEVWYGARAKDINLVDAI 291 >gi|86139080|ref|ZP_01057651.1| peptidase, family S49 [Roseobacter sp. MED193] gi|85824311|gb|EAQ44515.1| peptidase, family S49 [Roseobacter sp. MED193] Length = 290 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 3/187 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + D+ L +E A+ + ++SPGGS I I+++ K PV+ Sbjct: 53 RGSLNDAT-LAPVLEAAFSKGKPDAVALEINSPGGSPVQSSLIGARIRRLAKEKDLPVLA 111 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ A++ I A +S+VGSIGV+ + L++ GV + + K Sbjct: 112 FVEDVAASGGYWLAAAADEIWADASSIVGSIGVISAGFGAQELLNRHGVERRVYTAGESK 171 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF NP+ V ++ ++ + F+ V++ R D + L G IW A ++ Sbjct: 172 SMLDPFQAENPEDVARLKVLLGDIHDNFITHVTDRRGDKLDSSEKLFTGEIWLAKRATEL 231 Query: 222 GLIDVVG 228 GLID +G Sbjct: 232 GLIDGIG 238 >gi|330444147|ref|YP_004377133.1| proteinase IV [Chlamydophila pecorum E58] gi|328807257|gb|AEB41430.1| proteinase IV [Chlamydophila pecorum E58] Length = 303 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAA 108 +E + +E+ D +I+ ++ PGG + I+ + K K+ P+ V+ + A Sbjct: 58 EEALLALEKEPFKDRVKGVILDMNCPGGEVFEVSRIYATLNFWKQKSSLPLYVFVNGLCA 117 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKSVKSSPMKAEPSP 166 S GY I+C ++ I + SL+GS+GVL PY VK L++ G+ + + KA +P Sbjct: 118 SGGYYIACTADKIYTSPASLIGSVGVL-SGPYFNVKEGLNRHGIESDVLTAGEEKAPLNP 176 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLID 225 ++ +A + Q V+D Y FV +V+ R + L + G RI+ +A + G +D Sbjct: 177 YTPWTAQARKERQGVIDFLYGQFVDVVASHRPLLTKDKLERTLGARIFPPQQALEEGFVD 236 Query: 226 VVG-GQEEVWQSLY-ALGVDQSIR 247 V+ ++ V Q L A G+++S R Sbjct: 237 VINVTKQHVLQELVTACGIEESYR 260 >gi|307130981|ref|YP_003882997.1| putative inner membrane peptidase [Dickeya dadantii 3937] gi|306528510|gb|ADM98440.1| predicted inner membrane peptidase [Dickeya dadantii 3937] Length = 348 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+ + R +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRFRQRGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IVGSIGVVAQIPNFNRLLKSKDIDVELHTAGQYKRTLTLFGENTEEGREKFREELNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + VSE R P ++ G W G +AK +GL+D +G +++ Sbjct: 256 LFKQFVSEMR--PSLDIESVATGEHWFGTQAKAMGLVDAIGTSDDL 299 >gi|213027718|ref|ZP_03342165.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 254 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 79 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 138 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 139 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 198 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 199 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 241 >gi|77360288|ref|YP_339863.1| putative periplasmic protease [Pseudoalteromonas haloplanktis TAC125] gi|76875199|emb|CAI86420.1| protease (may metabolize cleaved signal peptides) [Pseudoalteromonas haloplanktis TAC125] Length = 339 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH 104 ++E +E I I I+ D S +++ L S GG + +Q++KN P+ + Sbjct: 105 EVESLREEITAIISIA-DASKDKVLIRLESGGGVVHGYGLAASQLQRIKNAGIPLSVAID 163 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P L K V + + + K Sbjct: 164 KVAASGGYMMACVADEIIAAPFAIVGSIGVIAQIPNFNKILKKNDVEFEQITAGEFKRTL 223 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + F E KA + ++ ++ ++ F VS R P ++ G W +A + GL+ Sbjct: 224 TLFGENTDKAREKFREEIEQTHGLFKTFVSTQR--PSLDISSVATGEHWFATQAIEKGLV 281 Query: 225 DVV 227 DV+ Sbjct: 282 DVI 284 >gi|257458110|ref|ZP_05623264.1| signal peptide peptidase SppA, 67K type [Treponema vincentii ATCC 35580] gi|257444404|gb|EEV19493.1| signal peptide peptidase SppA, 67K type [Treponema vincentii ATCC 35580] Length = 606 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEM 106 DS L + ++ + DDS A+++ + S GG A E I R++ ++ + KPV+ + + Sbjct: 347 DSPTLTDLFDQAADDDSIKAVVLRIDSGGGEVNASEDIRRSVDRLSKKIGKPVVVSMGSI 406 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPS 165 AAS Y I+ +++ + + ++ GSIGV P ++ + + G+ + + ++ Sbjct: 407 AASGAYWIASSADYVFCSPYTITGSIGVFAVSPTIQNAVKEYFGIHVDGISATGRM---- 462 Query: 166 PFSEV-NPKAVQMMQDVVD--SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P+S NP + Q ++ +Y F+ V++ RN+P L+ G+I++G AK++ Sbjct: 463 PYSLFRNPTDEEKTQSELEVMHTYSVFLDKVAQGRNLPRATVEELAQGKIYSGTRAKELQ 522 Query: 223 LIDVVGG 229 L D +GG Sbjct: 523 LADELGG 529 >gi|291085291|ref|ZP_06352653.2| SohB protein, peptidase U7 family [Citrobacter youngae ATCC 29220] gi|291071517|gb|EFE09626.1| SohB protein, peptidase U7 family [Citrobacter youngae ATCC 29220] Length = 351 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q++++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VVVRLESPGGVVHGYGLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 199 IVGSIGVVAQIPNFNRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHH 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A GL+D + +EV Sbjct: 259 LFKDFVQRMR--PALDIEQVATGEHWFGQQALANGLVDEINTSDEV 302 >gi|237808143|ref|YP_002892583.1| putative periplasmic protease [Tolumonas auensis DSM 9187] gi|237500404|gb|ACQ92997.1| Peptidase S49 domain protein [Tolumonas auensis DSM 9187] Length = 339 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ + S GG + +Q+++++ +T + ++AAS GY+++C + I+AA + Sbjct: 128 VLIRVESGGGVVHGYGLGASQLQRIRDQGLYLTVSIDKVAASGGYMMACVAQKIIAAPFA 187 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K V ++ + K + F E + KA + + +++ + Sbjct: 188 IVGSIGVVAQLPNFNRLLKKHDVDVELHTAGQFKRTLTIFGENDDKAREKFKAELETVHQ 247 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE R P ++ G W AEAKK+GL+D Sbjct: 248 QFKQFVSEHR--PRMDMEQIATGEHWLAAEAKKLGLVD 283 >gi|304396079|ref|ZP_07377961.1| Peptidase S49 domain protein [Pantoea sp. aB] gi|304356448|gb|EFM20813.1| Peptidase S49 domain protein [Pantoea sp. aB] Length = 348 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ IT V ++AAS GY+++C ++ IVAA S Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRDQGLRITAAVDKVAASGGYMMACVADRIVAAPFS 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + Q+ +D ++ Sbjct: 196 IIGSIGVVAQIPNFNRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQEDLDETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +A +GLID +G +++ Sbjct: 256 LFKQFVHQMR--PSLDINKVATGEHWYGRQALNLGLIDEIGTSDDL 299 >gi|319763864|ref|YP_004127801.1| peptidase s49 [Alicycliphilus denitrificans BC] gi|330823872|ref|YP_004387175.1| peptidase S49 [Alicycliphilus denitrificans K601] gi|317118425|gb|ADV00914.1| peptidase S49 [Alicycliphilus denitrificans BC] gi|329309244|gb|AEB83659.1| peptidase S49 [Alicycliphilus denitrificans K601] Length = 346 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 8/223 (3%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSAT- 67 V++ LV VV +S + ++PH A + ++G+I E S E + R + +DS + Sbjct: 74 VLIVLVGWAVVSRDIASPAK-SAPHTAVVDVKGEIAAGAEASAEFVVAAMRSAFEDSGSQ 132 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++SPGGS I I ++K + KPV V E ASA Y I+ A++ I + Sbjct: 133 AVVLLINSPGGSPVQAGMINDEIVRLKAKYNKPVYAVVEETCASAAYYIAAAADDIFVDK 192 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S+VGSIGVL ++KLGV + + + K PFS +P Q ++D Sbjct: 193 ASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPQSPTQRGYAQQMLDQI 252 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ V + R T G WTG +A ++GL D G Sbjct: 253 HQQFIAAVKKGRGERLKATPETFSGLFWTGQQAVEMGLADQFG 295 >gi|212223529|ref|YP_002306765.1| Hypothetical endopeptidase IV [Thermococcus onnurineus NA1] gi|212008486|gb|ACJ15868.1| Hypothetical endopeptidase IV [Thermococcus onnurineus NA1] Length = 335 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 11/205 (5%) Query: 32 EDNSPH----VARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEA 85 E N P +A + I G I++ L I + I+ +DS +++ + SPGG Sbjct: 81 EQNLPEGNTTIAIVPIFGLIDEYTALSIIPVLRDIAGNDSIGGVVLWIESPGGYVGPVRE 140 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++K+ KPV+ +AAS GY I+ + I+A + VGSIGV++ + ++ Sbjct: 141 IYATVKKLNLIKPVVAYTGGIAASGGYYIAVGAEEIIADPLAEVGSIGVIYVHYNLQQNY 200 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + G+ ++ K+ P K + + + + M+ + VD+ + F++ VS R + ++T Sbjct: 201 EMNGIKVEVFKTGPYKDMGAEWRGLTEEEKAMITESVDTYFQAFLQAVSSGRGMSLNETK 260 Query: 206 VLSDGRIW-----TGAEAKKVGLID 225 + GR W TG+ + G +D Sbjct: 261 EYATGRTWFAMNVTGSLVDETGDLD 285 >gi|292655044|ref|YP_003534941.1| proteinase IV-like [Haloferax volcanii DS2] gi|291370747|gb|ADE02974.1| proteinase IV-like, transmembrane [Haloferax volcanii DS2] Length = 333 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 7/184 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 L+V L++PGG + I RA+ P + + AS GY I+ + + + + S+ Sbjct: 115 LLVKLNTPGGEVLPSDDIRRAVADFDG--PTVAYATDTCASGGYWIASGCDELWSHDVSV 172 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ DK+G+S + + K E + +Q ++D Y Sbjct: 173 VGSIGVIGSSVNASELADKVGLSYERFAAGKYKDAGMALKEPTEDEREYLQGLIDDYYDD 232 Query: 189 FVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQ-S 245 FV V+E R++ D +V ++ R++ G EA ++GL+D +G +++V L LG D+ S Sbjct: 233 FVERVAEGRDM--DPQVVRDTEARVYLGEEAHELGLVDSLGSRDDVEDRLAERLGRDEVS 290 Query: 246 IRKI 249 +R+ Sbjct: 291 VREF 294 >gi|52628202|gb|AAU26943.1| signal peptide peptidase SppA (protease IV) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 326 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 90/166 (54%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG+ +Q+++++K P+ + +MAAS GYL++C +N I+AA + Sbjct: 126 VLVRLESPGGAVNGYGLAASQLQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P +L K + ++ + + K + F+E K + Q+ ++ + Sbjct: 186 IIGSIGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHT 245 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V ++R+ + DK ++ G W +A + L+D + +E Sbjct: 246 AFREYVLKNRSQLDIDK---VATGEHWIAKDAFDLRLVDKLATSDE 288 >gi|152969822|ref|YP_001334931.1| putative periplasmic protease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330002600|ref|ZP_08304369.1| putative signal peptide peptidase SppA [Klebsiella sp. MS 92-3] gi|150954671|gb|ABR76701.1| putative peptidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328537251|gb|EGF63511.1| putative signal peptide peptidase SppA [Klebsiella sp. MS 92-3] Length = 360 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 148 VVIRLESPGGVVHGYGLAASQLQRLRDKQIPLTVSVDKVAASGGYMMACVANKIVSAPFA 207 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + FL + I+ + K + E + + ++ ++ ++H Sbjct: 208 ILGSIGVVAQIPNLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHH 267 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D V +E+ L Sbjct: 268 LFKDFVHRMR--PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGL 315 >gi|118593769|ref|ZP_01551138.1| Peptidase U7 [Stappia aggregata IAM 12614] gi|118433679|gb|EAV40342.1| Peptidase U7 [Stappia aggregata IAM 12614] Length = 294 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 18/236 (7%) Query: 9 KTRYVMLS----LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +TR+ +S L+T+ + + + NS + I Q++D I+ D+ Sbjct: 63 RTRFTRVSGNTALITVDGSLVNRGAWIGTNSGLTSYEGIAAQVDD----------IAADN 112 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 +I+ ++S GG A + I+K+++ K VI V+++AASAGY I+ A++ IV + Sbjct: 113 DIRNVIIDMNSYGGEATGMSTLAAKIRKLRSTKTVIAVVNDVAASAGYGIASAADEIVVS 172 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 TSLVGSIGV+ + L+ G+ + + K + + F ++ + MQ V + Sbjct: 173 PTSLVGSIGVVMLHLDRSNELEAKGIKPTLIHAGAKKVDGNSFEPLSDNVREDMQKDVMA 232 Query: 185 SYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Y F+ V R+ + DK ++ ++ G EA GL D +G EEV L Sbjct: 233 FYADFLNTVEAGRSSWRLSADKARK-TEADVFIGNEAISAGLADRLGTLEEVLAEL 287 >gi|283785434|ref|YP_003365299.1| protease [Citrobacter rodentium ICC168] gi|282948888|emb|CBG88490.1| probable protease [Citrobacter rodentium ICC168] Length = 348 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 136 VVVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFNRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHQ 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P V++ G W G +A + GLID + +EV Sbjct: 256 LFKAFVHRMR--PKLDIEVVATGEHWYGQQALEKGLIDEINTSDEV 299 >gi|153871746|ref|ZP_02000840.1| Peptidase S49, SppA [Beggiatoa sp. PS] gi|152071791|gb|EDN69163.1| Peptidase S49, SppA [Beggiatoa sp. PS] Length = 211 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 24/184 (13%) Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLD 146 R ++K PV ++ AS GY I+ A++ I A + S+VGSIGVL + +V+ ++ Sbjct: 11 RRLRKKHPEIPVYAVATDICASGGYYIAAAADEIYADKASVVGSIGVLMDGFGFVET-MN 69 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL- 205 KLGV + + + K PFS + V+ ++ V++ + F++ V E R +K+L Sbjct: 70 KLGVERRLLTAGEHKGFLDPFSPMKEDDVEHIKTVLNDIHVQFIKQVKEGR----EKSLT 125 Query: 206 -----------VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +L G +WTG +A ++GL+D +G V + + KIKD+ P Sbjct: 126 NKGKLELLDNPILFSGLVWTGEQALELGLVDGLGSSSYVAREII------KAEKIKDFTP 179 Query: 255 PKNY 258 NY Sbjct: 180 KPNY 183 >gi|256374226|ref|YP_003097886.1| peptidase S49 [Actinosynnema mirum DSM 43827] gi|255918529|gb|ACU34040.1| peptidase S49 [Actinosynnema mirum DSM 43827] Length = 290 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 6/198 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV- 93 +P+ +A RG + ++Q + + R + A+ + ++SPGG+ I ++++ Sbjct: 35 TPNPGPVAARGSL-NAQSVESALTRAFEHERLVAVALLVNSPGGAPTQSALIADRVRELA 93 Query: 94 -KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K R PV+ ++AAS GY ++CA++ I A TSLVGSIGV+ + +++ GV Sbjct: 94 AKRRVPVLAFCEDVAASGGYWLACAADEIHAHPTSLVGSIGVVSSGFGLTGLMERFGVER 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSDG 210 + + K PF + V ++ + + F V+E R + D + + G Sbjct: 154 RVHSAGESKVRLDPFQPEKAEDVAWLEGLQSELHEQFKAWVTERRGRRLAADAPDLFA-G 212 Query: 211 RIWTGAEAKKVGLIDVVG 228 +WTGA+A ++GL+D +G Sbjct: 213 EVWTGAKALELGLVDGLG 230 >gi|118594938|ref|ZP_01552285.1| Peptidase family U7 [Methylophilales bacterium HTCC2181] gi|118440716|gb|EAV47343.1| Peptidase family U7 [Methylophilales bacterium HTCC2181] Length = 318 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 9/221 (4%) Query: 17 LVTLTVVYFSWSSH-VEDNSPHVARIAIRGQIEDSQELIERIERISRDD-----SATALI 70 L+ L +++ S A I +RG+I Q + RIS + ALI Sbjct: 43 LIALLLIFVSGGDRGAVSTGEFTALINLRGEIGADQPVNGSDFRISLKEVYANPGTKALI 102 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETS 127 +S++SPGGS I IQ+ K + P V V ++ AS Y I+ A++ I + S Sbjct: 103 LSINSPGGSPVQSGMINDEIQRYKKKFPEIPVYAVVEDVCASGAYYIAVAADKIFVDKAS 162 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGVL + + LG+ + + + KA PF ++PK + ++ + Sbjct: 163 IVGSIGVLIDGFGFEKAIATLGIERRLITAGENKAIMDPFLPIDPKQKLHIDAMLAEVHQ 222 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F+ +V R + G W+G +A ++GL D +G Sbjct: 223 QFINVVKRGRGDRLANNDDIFSGLFWSGEKAIQLGLADDMG 263 >gi|206578027|ref|YP_002238995.1| peptidase, S49 (protease IV) family [Klebsiella pneumoniae 342] gi|290512950|ref|ZP_06552314.1| serine protease SohB [Klebsiella sp. 1_1_55] gi|206567085|gb|ACI08861.1| peptidase, S49 (protease IV) family [Klebsiella pneumoniae 342] gi|289774563|gb|EFD82567.1| serine protease SohB [Klebsiella sp. 1_1_55] Length = 348 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 136 VVIRLESPGGVVHGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + FL + I+ + K + E + + ++ ++ ++H Sbjct: 196 ILGSIGVVAQIPNLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHH 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D V +E+ L Sbjct: 256 LFKDFVHRMR--PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGL 303 >gi|288935905|ref|YP_003439964.1| peptidase S49 domain protein [Klebsiella variicola At-22] gi|288890614|gb|ADC58932.1| Peptidase S49 domain protein [Klebsiella variicola At-22] Length = 363 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 151 VVIRLESPGGVVHGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFA 210 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + FL + I+ + K + E + + ++ ++ ++H Sbjct: 211 ILGSIGVVAQIPNLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHH 270 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D V +E+ L Sbjct: 271 LFKDFVHRMR--PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGL 318 >gi|254452000|ref|ZP_05065437.1| peptidase S49 [Octadecabacter antarcticus 238] gi|198266406|gb|EDY90676.1| peptidase S49 [Octadecabacter antarcticus 238] Length = 262 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 12/204 (5%) Query: 34 NSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + PHVA I ++G I S + L + IE+ R A+ + +SSPGGS I Sbjct: 10 SDPHVAVIRLQGAIATSGRALSDRGLADSIEKAFRS-KPKAVALEISSPGGSPVQSSLIC 68 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K PV + V ++AAS GY ++ A + I S+VGSIGV+ + L Sbjct: 69 ARIRRLADEKDIPVYSFVEDVAASGGYWLATAGDEIYVDRGSIVGSIGVISAGFGLTGTL 128 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKT 204 DK+G + + K+ PF P V+ ++ ++ + +F VS R D+ Sbjct: 129 DKIGAERRVYTAGKSKSMLDPFQAEKPADVKRLKGLLRDMHVFFKDHVSTRRAGKLVDQD 188 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 L D IW G ++ VGL D +G Sbjct: 189 LFTGD--IWVGQKSIDVGLADHLG 210 >gi|238894328|ref|YP_002919062.1| putative periplasmic protease [Klebsiella pneumoniae NTUH-K2044] gi|238546644|dbj|BAH62995.1| putative peptidase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 348 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 136 VVIRLESPGGVVHGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + FL + I+ + K + E + + ++ ++ ++H Sbjct: 196 ILGSIGVVAQIPNLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHH 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D V +E+ L Sbjct: 256 LFKDFVHRMR--PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGL 303 >gi|27904758|ref|NP_777884.1| putative periplasmic protease [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396886|sp|Q89AL0|SOHB_BUCBP RecName: Full=Putative protease sohB gi|27904155|gb|AAO26989.1| putative protease SohB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 349 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG+ + +Q++++RK +T + ++A S GY+++C +N I+A S Sbjct: 140 VLLRLESSGGTIHGYGLAAVQLQRLRSRKIFLTISIDKIATSGGYMMACVANYIIATPFS 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q+P + FL K + ++ + K + F E P+ + + ++ ++ Sbjct: 200 IIGSIGVVAQFPNIHKFLKKNNIDVELHTAGVHKRTLTIFGENTPEDRKKFVEELNVAHD 259 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F + V R P LS+G W G+ A K L+D + ++ Sbjct: 260 LFKKFVKTMR--PSLNIEKLSNGECWFGSIALKKKLVDDINTSDD 302 >gi|262043004|ref|ZP_06016147.1| peptidase U7 family SohB protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039606|gb|EEW40734.1| peptidase U7 family SohB protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 148 VVIRLESPGGVVHGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFA 207 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + FL + I+ + K + E + + ++ ++ ++H Sbjct: 208 ILGSIGVVAQIPNLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHH 267 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D V +E+ L Sbjct: 268 LFKDFVHRMR--PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGL 315 >gi|308187005|ref|YP_003931136.1| protease [Pantoea vagans C9-1] gi|308057515|gb|ADO09687.1| putative protease [Pantoea vagans C9-1] Length = 348 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ IT V ++AAS GY+++C ++ IVAA S Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRDADLRITAAVDKVAASGGYMMACVADRIVAAPFS 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + Q+ +D ++ Sbjct: 196 IIGSIGVVAQIPNFNRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQEDLDETHL 255 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R + D+ ++ G W G +A +GLID +G +++ Sbjct: 256 LFKQFVHQMRPTLDIDR---VATGEHWYGRQALDLGLIDEIGTSDDL 299 >gi|312115016|ref|YP_004012612.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] gi|311220145|gb|ADP71513.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] Length = 307 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 9/166 (5%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+I+ ++SPGGS I+ I +K + K V ++AAS GY+I+CA++ I A Sbjct: 76 AVILQINSPGGSPVQSRLIYDRIVALKEEHDKKVYAFCEDVAASGGYMIACAADEIYADG 135 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +S+VGSIGV+ + KLG+ + S K + PF P+ + ++ + Sbjct: 136 SSIVGSIGVISAGFGFVHLIHKLGIDRRVYTSGENKMQLDPFRPEKPEEISRLKRLQAIV 195 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD----GRIWTGAEAKKVGLIDVV 227 + F+ LV ESR D+ D G W G +A ++GLID + Sbjct: 196 HEDFIALVKESRG---DRIANSGDNLFTGEFWAGRQALELGLIDGI 238 >gi|296106434|ref|YP_003618134.1| Periplasmic protease [Legionella pneumophila 2300/99 Alcoy] gi|295648335|gb|ADG24182.1| Periplasmic protease [Legionella pneumophila 2300/99 Alcoy] Length = 311 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 101/189 (53%), Gaps = 7/189 (3%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH 104 Q+E ++ + + I++ + ++V L SPGG+ +Q+++++K P+ + Sbjct: 90 QVEQLRDEVTSVLSIAKPEDE--VLVRLESPGGAVNGYGLAASQLQRIRDKKIPLTVSID 147 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K + ++ + + K Sbjct: 148 KMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTL 207 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGL 223 + F+E K + Q+ ++ + F V ++R+ + DK ++ G W +A + L Sbjct: 208 TLFAENTEKGRKKFQEDLEKIHTAFREYVLKNRSQLDIDK---VATGEHWIAKDAFDLRL 264 Query: 224 IDVVGGQEE 232 +D + +E Sbjct: 265 VDKLATSDE 273 >gi|291460898|ref|ZP_06025776.2| protease IV [Fusobacterium periodonticum ATCC 33693] gi|291380138|gb|EFE87656.1| protease IV [Fusobacterium periodonticum ATCC 33693] Length = 588 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 10/200 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 E I ++ + A+++ ++SPGGSA + I ++++ + KPV + +AAS Sbjct: 341 NETIAKLNTAKENKKIKAVVLRVNSPGGSALTSDIIAEKVKELASEKPVYVSMSSVAASG 400 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY IS +N I ++ GS+GV+ L GV+++ + + E S Sbjct: 401 GYYISANANKIYVDRNTVTGSVGVVSVLVDYSSLLKDNGVNVEKIS----EGEYSDLYSA 456 Query: 171 NPKAVQMMQDVVDSS---YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + + +S+ Y F+ +VS R I ++ L++GR+WTG EA K GL D + Sbjct: 457 DTFTEKKYNKIYNSNLKVYEDFLNVVSNGRKIDKERLKELAEGRVWTGTEAVKNGLADEI 516 Query: 228 GGQEEVWQSLYALGVDQSIR 247 GG ++ ++Y + D +I Sbjct: 517 GG---LYSTIYGVTEDNNIE 533 >gi|163792424|ref|ZP_02186401.1| proteinase [alpha proteobacterium BAL199] gi|159182129|gb|EDP66638.1| proteinase [alpha proteobacterium BAL199] Length = 287 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 7/185 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLI 114 +E R S TA+ + ++SPGGS E I I+ + KPV+ V ++AAS GY + Sbjct: 46 LEAAFRPRSVTAVALVVNSPGGSPVQSELIAGRIRDLAAECDKPVVAFVEDVAASGGYWL 105 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ + TS++GSI V+ + + KLG+ + + KA PF P Sbjct: 106 ACAADEVRVTGTSIIGSIEVISSGFGFQEAIGKLGIERRVHTAGSRKALLDPFQSERPDD 165 Query: 175 VQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V ++ + + F+ V R + D L +G+ WTGA +GL D G+ E Sbjct: 166 VAHLKAIQAEMHERFISWVRSRRGDLLKVDDEPELLEGKFWTGARGVALGLAD---GEGE 222 Query: 233 VWQSL 237 + ++L Sbjct: 223 LRRTL 227 >gi|207092958|ref|ZP_03240745.1| signal peptide protease IV [Helicobacter pylori HPKX_438_AG0C1] Length = 194 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 6/183 (3%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ML L+ L V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKS--FMLLLIVL--VFFSAKESTPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQ 179 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K E F+ P + +Q Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYK-EIGTFTRAWKPNEKEFLQ 191 Query: 180 DVV 182 ++V Sbjct: 192 NLV 194 >gi|148360499|ref|YP_001251706.1| signal peptide peptidase SppA [Legionella pneumophila str. Corby] gi|148282272|gb|ABQ56360.1| signal peptide peptidase SppA (protease IV) [Legionella pneumophila str. Corby] Length = 311 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 90/166 (54%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG+ +Q+++++K P+ + +MAAS GYL++C +N I+AA + Sbjct: 111 VLVRLESPGGAVNGYGLAASQLQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFA 170 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P +L K + ++ + + K + F+E K + Q+ ++ + Sbjct: 171 IIGSIGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHT 230 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V ++R+ + DK ++ G W +A + L+D + +E Sbjct: 231 AFREYVLKNRSQLDIDK---VATGEHWIAKDAFDLRLVDKLATSDE 273 >gi|165975466|ref|YP_001651059.1| putative periplasmic protease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875567|gb|ABY68615.1| serine protease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 351 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|292488385|ref|YP_003531267.1| putative protease [Erwinia amylovora CFBP1430] gi|292899581|ref|YP_003538950.1| peptidase [Erwinia amylovora ATCC 49946] gi|291199429|emb|CBJ46546.1| putative peptidase [Erwinia amylovora ATCC 49946] gi|291553814|emb|CBA20859.1| putative protease [Erwinia amylovora CFBP1430] gi|312172528|emb|CBX80784.1| putative protease [Erwinia amylovora ATCC BAA-2158] Length = 349 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 89/171 (52%), Gaps = 3/171 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIV 122 + +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV Sbjct: 132 EKGDEVLLRLESPGGVVHGYGLAASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADRIV 191 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA S++GSIGV+ Q P L + + ++ + K + F E + + ++ + Sbjct: 192 AAPFSIIGSIGVVAQIPNFNRLLKRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREEL 251 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + ++ F + V + R P ++ G W G +A + GL+D +G +++ Sbjct: 252 NETHQLFKQFVHQMR--PTLDIDSIATGEHWYGQQALEKGLVDAIGTSDDL 300 >gi|54296876|ref|YP_123245.1| putative periplasmic protease [Legionella pneumophila str. Paris] gi|229270458|ref|YP_094890.2| putative periplasmic protease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750661|emb|CAH12068.1| hypothetical protein lpp0917 [Legionella pneumophila str. Paris] Length = 312 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 101/189 (53%), Gaps = 7/189 (3%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH 104 Q+E ++ + + I++ + ++V L SPGG+ +Q+++++K P+ + Sbjct: 91 QVEQLRDEVTSVLSIAKPEDE--VLVRLESPGGAVNGYGLAASQLQRIRDKKIPLTVSID 148 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K + ++ + + K Sbjct: 149 KMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTL 208 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGL 223 + F+E K + Q+ ++ + F V ++R+ + DK ++ G W +A + L Sbjct: 209 TLFAENTEKGRKKFQEDLEKIHTAFREYVLKNRSQLDIDK---VATGEHWIAKDAFDLRL 265 Query: 224 IDVVGGQEE 232 +D + +E Sbjct: 266 VDKLATSDE 274 >gi|84499786|ref|ZP_00998074.1| peptidase, family S49 [Oceanicola batsensis HTCC2597] gi|84392930|gb|EAQ05141.1| peptidase, family S49 [Oceanicola batsensis HTCC2597] Length = 285 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 3/187 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + D + + IER R A+ ++++SPGGS I I+++ K PV Sbjct: 48 RGPLSD-EAMAPVIERAFRRGKPAAVALAINSPGGSPVQSSLIAARIRRLSEEKSVPVYA 106 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V + AAS GY ++CA+ I A +S+VGSIGV+ L + GV + S K Sbjct: 107 FVEDAAASGGYWLACAAEEIHADRSSVVGSIGVIAASFGAHVLLARQGVERRVHTSGKSK 166 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF + V ++ ++ + F+ V R ++ L G W +AK++ Sbjct: 167 SMLDPFQPEKEEDVARLKSLLTDIHAAFIDHVKTHRGGKLKESEDLFTGEFWLAEKAKEL 226 Query: 222 GLIDVVG 228 GLID VG Sbjct: 227 GLIDHVG 233 >gi|251792473|ref|YP_003007199.1| putative periplasmic protease [Aggregatibacter aphrophilus NJ8700] gi|247533866|gb|ACS97112.1| S49 family peptidase [Aggregatibacter aphrophilus NJ8700] Length = 353 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 10/197 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLIS 115 I+ DD +++ L SPGG + + ++K +T V ++AAS GY+++ Sbjct: 132 IQTAKNDDE---VLLCLESPGGMVHGYGLAASQLARLKQHGIKLTVAVDKVAASGGYMMA 188 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 C ++ I++A +++GSIGV+ Q P V L K V + + + K + E K Sbjct: 189 CVADKIISAPFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEYKRTMTILGENTEKGK 248 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW- 234 Q Q +D ++ F + VS++R P+ ++ G W G +A ++ L+D + ++V Sbjct: 249 QKFQQELDETHQLFKQFVSQNR--PHLDVDSVATGEHWFGQQALQLNLVDEIMTSDDVLL 306 Query: 235 ---QSLYALGVDQSIRK 248 + +G+ S++K Sbjct: 307 QAIKEKRVIGIKYSVKK 323 >gi|190149277|ref|YP_001967802.1| protease SohB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307244809|ref|ZP_07526908.1| protease sohB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251529|ref|ZP_07533436.1| protease sohB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256029|ref|ZP_07537817.1| protease sohB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307262588|ref|ZP_07544219.1| protease sohB [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914408|gb|ACE60660.1| putative protease SohB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306854254|gb|EFM86460.1| protease sohB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860993|gb|EFM92999.1| protease sohB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865451|gb|EFM97346.1| protease sohB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306872086|gb|EFN03799.1| protease sohB [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 351 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|54293830|ref|YP_126245.1| putative periplasmic protease [Legionella pneumophila str. Lens] gi|53753662|emb|CAH15120.1| hypothetical protein lpl0886 [Legionella pneumophila str. Lens] Length = 312 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 101/189 (53%), Gaps = 7/189 (3%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH 104 Q+E ++ + + I++ + ++V L SPGG+ +Q+++++K P+ + Sbjct: 91 QVEQLRDEVTSVLSIAKPEDE--VLVRLESPGGAVNGYGLAASQLQRIRDKKIPLTVSID 148 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K + ++ + + K Sbjct: 149 KMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTL 208 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGL 223 + F+E K + Q+ ++ + F V ++R+ + DK ++ G W +A + L Sbjct: 209 TLFAENTEKGRKKFQEDLEKIHTAFREYVLKNRSQLDIDK---VATGEHWIAKDAFDLRL 265 Query: 224 IDVVGGQEE 232 +D + +E Sbjct: 266 VDKLATSDE 274 >gi|126737104|ref|ZP_01752839.1| Periplasmic serine protease [Roseobacter sp. SK209-2-6] gi|126721689|gb|EBA18392.1| Periplasmic serine protease [Roseobacter sp. SK209-2-6] Length = 305 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 9/188 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A A+++ + SPGG + I + +P++ + +AASA Y I+ A++ + Sbjct: 102 DAHAQAIVIEVDSPGGMVEQVQETASMIYSARRSGRPIVAVANSLAASAAYWIASAADEL 161 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 V + VGSIGV + + L+K G+ + + K E PF ++ P+A Q Sbjct: 162 VVTPSGRVGSIGVYTMHDNLAVALEKAGIERSVISAGARKVESLPFGKLAPEARAATQAQ 221 Query: 182 VDSSYHWFVRLVSESRNI--------PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 VD++Y F V+E R + P + GR + EA ++G+ D V E Sbjct: 222 VDATYERFTHDVAEFRGVASEVVRADPEEAEAHFGGGRAYHAQEAVRLGMADRVATLSET 281 Query: 234 WQSLYALG 241 Q L G Sbjct: 282 IQRLSTEG 289 >gi|163745636|ref|ZP_02152996.1| peptidase, family S49, putative [Oceanibulbus indolifex HEL-45] gi|161382454|gb|EDQ06863.1| peptidase, family S49, putative [Oceanibulbus indolifex HEL-45] Length = 244 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 2/174 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IER A+ + ++SPGGS I I+++ K PVI V ++AAS GY + Sbjct: 19 IERAFAKGKPAAVALEINSPGGSPVQSSLIGARIRRLSEEKNIPVIAFVEDVAASGGYWL 78 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I A +S+VGSIGV+ V F+ + GV + + K+ PF NP+ Sbjct: 79 AAAADEIYADPSSVVGSIGVISASFGVHEFIREHGVERRVYTAGQSKSMLDPFRPENPED 138 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V ++ +++ + F+ V R + L G IW A ++GLID +G Sbjct: 139 VARLKVLLEDIHENFIGHVKTRRAGKLPEGQDLFTGEIWLAKRAAELGLIDGIG 192 >gi|39934118|ref|NP_946394.1| peptidase S49 [Rhodopseudomonas palustris CGA009] gi|39647966|emb|CAE26486.1| possible protease SohB [Rhodopseudomonas palustris CGA009] Length = 300 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 3/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 ++R +A A+ ++++SPGGS I+ I+ + K PV V ++AAS GY+I Sbjct: 61 LDRAFSTRNAKAVALAINSPGGSPVQSRLIYLRIRALAAEKKLPVYAFVEDVAASGGYMI 120 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I +S++GSIGV+ + + K+GV + + KA+ PF +P+ Sbjct: 121 ACAADEIYCDPSSILGSIGVVGGGFGFQELIRKIGVERRLYTAGERKAQLDPFLPEDPQE 180 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V ++ + + F+ LV ESR + L G W GA + +GL D +G V Sbjct: 181 VARLKVLQQEIHALFIALVKESRGTRLKGEESKLFTGEYWAGATSVSLGLADSIGDLRAV 240 Query: 234 WQSLYA 239 + + Sbjct: 241 LRGKFG 246 >gi|110681212|ref|YP_684219.1| S49 family peptidase putative [Roseobacter denitrificans OCh 114] gi|109457328|gb|ABG33533.1| peptidase, family S49, putative [Roseobacter denitrificans OCh 114] Length = 265 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 3/189 (1%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PV 99 A RG + D + L IE+ A+ + ++SPGGS I I+++ K PV Sbjct: 26 AGRGTLND-ESLAPVIEKAFARGKPAAVALEVNSPGGSPVQSSLIGARIRRLAEEKDIPV 84 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 I V ++AAS GY ++ A++ I E+SLVGSIGV+ L + G+ + + Sbjct: 85 IAFVEDVAASGGYWLAAAADEIYGDESSLVGSIGVISASFGAHDLLARQGIERRVYTAGK 144 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 K+ PF NP+ V ++ +++ + F V+ R L G +W A Sbjct: 145 SKSMLDPFRPENPEDVARLKGLLEDIHGNFKDHVAARRKGKLTDDRDLFTGEVWLARRAA 204 Query: 220 KVGLIDVVG 228 ++GLID +G Sbjct: 205 ELGLIDGIG 213 >gi|192289645|ref|YP_001990250.1| peptidase S49 [Rhodopseudomonas palustris TIE-1] gi|192283394|gb|ACE99774.1| peptidase S49 [Rhodopseudomonas palustris TIE-1] Length = 300 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 3/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 ++R +A A+ ++++SPGGS I+ I+ + K PV V ++AAS GY+I Sbjct: 61 LDRAFSTRNAKAVALAINSPGGSPVQSRLIYLRIRALAAEKKLPVYAFVEDVAASGGYMI 120 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I +S++GSIGV+ + + K+GV + + KA+ PF +P+ Sbjct: 121 ACAADEIYCDPSSILGSIGVVGGGFGFQELIRKIGVERRLYTAGERKAQLDPFLPEDPQE 180 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V ++ + + F+ LV ESR + L G W GA + +GL D +G V Sbjct: 181 VARLKVLQQEIHALFIALVKESRGTRLKGEESKLFTGEYWAGATSVSLGLADSIGDLRAV 240 Query: 234 WQSLYA 239 + + Sbjct: 241 LRGKFG 246 >gi|307249131|ref|ZP_07531138.1| protease sohB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854419|gb|EFM86615.1| protease sohB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 351 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|148653534|ref|YP_001280627.1| signal peptide peptidase SppA, 36K type [Psychrobacter sp. PRwf-1] gi|148572618|gb|ABQ94677.1| signal peptide peptidase SppA, 36K type [Psychrobacter sp. PRwf-1] Length = 354 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 21/238 (8%) Query: 29 SHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 S V+ PH+A + ++G I ++ ++ + A A++++++SPGGS Sbjct: 88 SSVDVTKPHIAVVDLQGVISADNTANAYDVSAALSEAFESKGAKAVVLNINSPGGSPVQS 147 Query: 84 EAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I++ + ++ P + + +M AS Y I+ A++ I +SLVGSIGV+ Sbjct: 148 DEIWKTMMSLRKEHPNKKLYAVIGDMGASGAYYIASAADEIYVNPSSLVGSIGVIMPGYN 207 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI- 199 +K +DK GV ++ + K S ++ Q ++ V+D+++ F+ V + R Sbjct: 208 LKGLMDKYGVKDATLTAGEYKDILSMSRDLTDFEKQHIKGVLDNTHKHFIDAVKKGRGDR 267 Query: 200 ---PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 P + L G WTG +A +GL D G SL +L + I + D+ P Sbjct: 268 LKNPEENKLFT--GLFWTGEQAIALGLADKKG-------SLMSLEKELDIDNVVDYTP 316 >gi|307260458|ref|ZP_07542153.1| protease sohB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869861|gb|EFN01643.1| protease sohB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 351 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|83854903|ref|ZP_00948433.1| peptidase, family S49 [Sulfitobacter sp. NAS-14.1] gi|83842746|gb|EAP81913.1| peptidase, family S49 [Sulfitobacter sp. NAS-14.1] Length = 265 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 3/187 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + DS + I++ A+++ +SSPGGS I I+++ + K PVI Sbjct: 28 RGGLNDSG-IGPAIDKAFNRGKPAAVVLEISSPGGSPVQSSLIGARIRRLADEKNIPVIA 86 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ A++ I A +S++GSIGV+ F+ + GV + + K Sbjct: 87 FVEDVAASGGYWLAAAADEIYADPSSVLGSIGVISASFGADEFIQRHGVERRVYTAGQSK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF P+ V ++ +++ + F+ V+ R L G +W A ++ Sbjct: 147 SMLDPFRPEKPEDVARLKQLLEDIHGNFIDHVTSRRGSKLSSDTDLFTGEVWLAKRATEL 206 Query: 222 GLIDVVG 228 GLID +G Sbjct: 207 GLIDGIG 213 >gi|84515710|ref|ZP_01003071.1| peptidase, family S49 [Loktanella vestfoldensis SKA53] gi|84510152|gb|EAQ06608.1| peptidase, family S49 [Loktanella vestfoldensis SKA53] Length = 263 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 8/214 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIER------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++P VA I ++G I +S ++ IE+ A+ + ++ PGGS I Sbjct: 9 SAPFVAVIRLQGAISNSGRGLDDPGLAPVIEKAFSKGKPAAVALEINCPGGSPVQSSLIA 68 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K PV V ++AAS GY ++CA++ I S+ GSIGV+ + Sbjct: 69 SRIRRLADEKKIPVFAFVEDVAASGGYWLACAADEIFIDACSITGSIGVISAGFGAHEAI 128 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 D+ G+ + + K+ PF NP V+ ++ +D + F+ V R + Sbjct: 129 DRYGIERRVHTAGKSKSLLDPFKPQNPADVKKLKGWLDDLHATFIAYVKSRRGLKLSDDP 188 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L G ++ G + GL+D +G V ++ + Sbjct: 189 DLFTGEVYIGQKGIDAGLVDGIGHLAPVMKARFG 222 >gi|307253763|ref|ZP_07535617.1| protease sohB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258220|ref|ZP_07539963.1| protease sohB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306863247|gb|EFM95187.1| protease sohB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867680|gb|EFM99525.1| protease sohB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 351 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEEAHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|316932585|ref|YP_004107567.1| peptidase S49 [Rhodopseudomonas palustris DX-1] gi|315600299|gb|ADU42834.1| peptidase S49 [Rhodopseudomonas palustris DX-1] Length = 300 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 3/175 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 ++R +A A+ ++++SPGGS I+ I+ + K PV V ++AAS GY+I Sbjct: 61 LDRAFSTRNAKAVALAINSPGGSPVQSRLIYLRIRALAAEKKLPVYAFVEDVAASGGYMI 120 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I +S++GSIGV+ + + K+GV + + KA+ PF +P+ Sbjct: 121 ACAADEIYCDPSSILGSIGVVGGGFGFQELIRKIGVERRLYTAGERKAQLDPFLPEDPQE 180 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 V ++ + + F+ LV ESR + L G W GA + +GL D +G Sbjct: 181 VARLKVLQQEIHALFIALVKESRGARLKGEESQLFTGEYWAGATSVSLGLADSIG 235 >gi|90021661|ref|YP_527488.1| putative periplasmic protease [Saccharophagus degradans 2-40] gi|89951261|gb|ABD81276.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Saccharophagus degradans 2-40] Length = 365 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 8/197 (4%) Query: 36 PHVARIAIRGQIE--DSQELIERIERI-SRDDSATALIVSLSSPGGSAYA-GEAIFRAIQ 91 P V G I+ ++QEL E I I S + ++V L SPGG + G A + + Sbjct: 116 PRVFVTHFDGDIKASETQELREVITAILSIAKPSDEVVVCLESPGGMVHGYGLAASQLAR 175 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + P+ V ++AAS GY+++C +N IVAA +++GSIGV+ Q P L K V Sbjct: 176 ITEKNIPLTVCVDKVAASGGYMMACVANKIVAAPFAVIGSIGVVAQIPNFHRLLKKHDVD 235 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDG 210 + + + K + F E K Q + ++ ++ F + + R+ + DK ++ G Sbjct: 236 YEMLTAGEYKRTLTMFGENTEKGRQKFVEDLEETHDLFKDFIRQHRSVVDVDK---VATG 292 Query: 211 RIWTGAEAKKVGLIDVV 227 IW G +A + LID V Sbjct: 293 EIWFGTKALEEKLIDAV 309 >gi|303250487|ref|ZP_07336684.1| putative periplasmic protease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650475|gb|EFL80634.1| putative periplasmic protease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 326 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|300114839|ref|YP_003761414.1| peptidase S49 domain-containing protein [Nitrosococcus watsonii C-113] gi|299540776|gb|ADJ29093.1| Peptidase S49 domain protein [Nitrosococcus watsonii C-113] Length = 325 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L + GG + +++++ ++ P+ V ++AAS GY+++C N I+AA + Sbjct: 122 ILLRLENGGGLVHEHGLAASQLERIRRKQIPLTIAVDKIAASGGYMMACVGNRIIAAPFA 181 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIG L Q P LDK G+ + +K+ +K + F + ++ + V+ + Sbjct: 182 IIGSIGALLQVPNFHRLLDKHGIDFEQIKAGELKRTVTLFGINTDRDRELAKQQVEDIHQ 241 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + R P+ + G+ W +AK++ LID Sbjct: 242 LFKEFIVRHR--PHIDLSQTATGQHWHAIQAKELNLID 277 >gi|241763832|ref|ZP_04761877.1| peptidase S49 [Acidovorax delafieldii 2AN] gi|241366876|gb|EER61290.1| peptidase S49 [Acidovorax delafieldii 2AN] Length = 353 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 7/224 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERIS-RDDSA 66 +++++L+ + +S ++PH A + I+G+I E S EL+ R + D+ + Sbjct: 76 WLLVALLVAWAALYQSTSGTSKSAPHTAVVDIKGEIASGAEASAELVVAAMRSALEDEGS 135 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAA 124 AL++ ++SPGGS I I ++K + KPV V E ASA Y I+ A++ I Sbjct: 136 QALVLLINSPGGSPVQAGIINDEIVRLKAKYNKPVYAVVEETCASAAYYIAAAADEIFVD 195 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + S+VGSIGVL ++KLGV + + + K PFS K ++D Sbjct: 196 KASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPQTEKQRAYALTMLDQ 255 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ +V R T G WTG +A ++GL D +G Sbjct: 256 IHQQFIGVVKAGRGDRLKPTPETFSGLFWTGQQAIEMGLADKLG 299 >gi|307249207|ref|ZP_07531204.1| protease sohB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858731|gb|EFM90790.1| protease sohB [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 351 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IVAA +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLLKKHEIDMDVMTAGEYKRTVTLVGENTKKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|300022742|ref|YP_003755353.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] gi|299524563|gb|ADJ23032.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] Length = 429 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 90/173 (52%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++++ S D +++ +++PGG A + I +++ +KPV+ V +MA SAGY I Sbjct: 97 EQLKKASTDSEVRGILLDMNTPGGEAAGTFEVSNLIMEIRKKKPVVAMVADMACSAGYAI 156 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I +T ++GSIGV++ + + G+ + + KAE +PF ++ Sbjct: 157 ASAASQIYTTQTGMMGSIGVVWVHFDRSLQMQNEGIKPTILHAGARKAEGNPFEPLSRVT 216 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q ++ + F+ V + R + L ++ ++ G +A K+GL D V Sbjct: 217 KANFQAEIEKLHSLFIETVLDGRPSLKEADLRATEAAVFMGQDAVKIGLADGV 269 >gi|167624533|ref|YP_001674827.1| putative periplasmic protease [Shewanella halifaxensis HAW-EB4] gi|167354555|gb|ABZ77168.1| Peptidase S49 domain protein [Shewanella halifaxensis HAW-EB4] Length = 342 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 10/214 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEA 85 +VE+N P V + +G I D+ E+ E IS D +IV++ S GG + Sbjct: 89 NVEENEPKVFVVDFKGSI-DASEVASLREEISAILAIADKGDEVIVNVESGGGMVHGYGL 147 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ + P+ V ++AAS GY+++C +N I +A ++VGSIGV+ Q P Sbjct: 148 ASSQLDRLRQAEIPLSICVDKVAASGGYMMACVANKIYSAPFAIVGSIGVVAQVPNFNRL 207 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDK 203 L K + + + K + F E + + Q ++ ++ F +++ R ++ DK Sbjct: 208 LKKHDIDYEQHTAGDFKRTLTIFGENTDEGREKFQKELEETHVLFKEFIAKYRPDLDLDK 267 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GL+D + ++V L Sbjct: 268 ---VATGEHWYGQQAIELGLVDEISTSDDVIMKL 298 >gi|310767745|gb|ADP12695.1| putative periplasmic protease [Erwinia sp. Ejp617] Length = 349 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IVAA S Sbjct: 137 VLLRLESPGGVVHGYGLAASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADRIVAAPFS 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + ++ ++ ++ Sbjct: 197 IIGSIGVVAQIPNFNRLLKRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREDLNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +A + GL+D +G +++ Sbjct: 257 LFKQFVHQMR--PTLDIDSVATGEHWYGQQALEKGLVDAIGTSDDL 300 >gi|118590806|ref|ZP_01548207.1| putative protease protein [Stappia aggregata IAM 12614] gi|118436782|gb|EAV43422.1| putative protease protein [Stappia aggregata IAM 12614] Length = 285 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 2/176 (1%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ + ++SPGGS IF+ I+ + +N K V+ V ++AAS GY+I+ A + I Sbjct: 57 APAVALVINSPGGSPVQSRLIFKRIRDLAKENEKDVLVFVEDVAASGGYMIALAGDEIFV 116 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ + K+GV + + K PF P+ ++ ++ + Sbjct: 117 DPSSIVGSIGVVAAGFGFTEMIKKIGVDRRVYTAGEKKVTLDPFQPEVPEDIEYIKSLQL 176 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F+ +V R L G+ WTG ++GL+D +G V + + Sbjct: 177 EIHETFIDMVKSRRGDVLSNDPDLFSGKFWTGRTGVELGLVDAIGDLRGVIKERFG 232 >gi|303326909|ref|ZP_07357351.1| minor capsid protein C, degenerate [Desulfovibrio sp. 3_1_syn3] gi|302862897|gb|EFL85829.1| minor capsid protein C, degenerate [Desulfovibrio sp. 3_1_syn3] Length = 441 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 2/179 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 +E + D SATAL+++L SPGG+ + + AI V RKPV + ASA Y ++ Sbjct: 113 METAAADPSATALLLALDSPGGAVGGCKELADAIAAVAARKPVAAYADGLCASAAYWLAS 172 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A+ + A T+ VGSIGV+ + +K+GVS + KA + + ++P++ Sbjct: 173 ATGRVFAPVTAQVGSIGVVMIHADFSHLNEKMGVSYSYITGGEWKAVGNKNAPLSPESRA 232 Query: 177 MMQDVVDSSYHWFVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLID-VVGGQEEV 233 +Q V++ + F V+ + + P DG+I+ EA+++GL+ +V G EE Sbjct: 233 YLQQRVNALHSIFRADVARNMGLDPSADACAWGDGQIFLAQEAQRLGLVSAIVTGMEEA 291 >gi|259908332|ref|YP_002648688.1| putative periplasmic protease [Erwinia pyrifoliae Ep1/96] gi|224963954|emb|CAX55459.1| Peptidase family U7 protein [Erwinia pyrifoliae Ep1/96] gi|283478271|emb|CAY74187.1| putative protease [Erwinia pyrifoliae DSM 12163] Length = 349 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IVAA S Sbjct: 137 VLLRLESPGGVVHGYGLAASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADRIVAAPFS 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + ++ ++ ++ Sbjct: 197 IIGSIGVVAQIPNFNRLLKRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREDLNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +A + GL+D +G +++ Sbjct: 257 LFKQFVHQMR--PTLDIDSVATGEHWYGQQALEKGLVDAIGTSDDL 300 >gi|303245308|ref|ZP_07331592.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] gi|302493157|gb|EFL53019.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] Length = 433 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 94/179 (52%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I ++E+ + + + D S A+++ + SPGG+ E + + V +KP+ ++ Sbjct: 74 IGSTREIGAGLLQAAADPSVKAILLDVDSPGGTVDGTEELAGIARIVAAQKPLYVYASDL 133 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 ASA Y I + I ++ +GSIGV+ + + +++GV I + + KA +P Sbjct: 134 MASAAYWIGSQAKEIGTQASAQIGSIGVVLTHTDWSGWDEQMGVDITYLTAGHFKAMGNP 193 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ +A +Q +D Y F+ V+ R + ++ + ++DG+I+ G +A ++GL+D Sbjct: 194 DEPLSDEARAYLQQQLDEVYGLFLDAVAAGRRVSREQAMAMADGKIFLGRQALELGLVD 252 >gi|295698501|ref|YP_003603156.1| probable protease SohB [Candidatus Riesia pediculicola USDA] gi|291157227|gb|ADD79672.1| probable protease SohB [Candidatus Riesia pediculicola USDA] Length = 326 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 6/184 (3%) Query: 48 EDSQELIERIERI-SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHE 105 E+ L E I I S D +++ L S GG+ + ++K +K +T + Sbjct: 108 EEVNSLREEITAILSVADKNDEVLLILESSGGTVNGYGLAAAQLMRLKEKKIKLTVSIDR 167 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 +AAS GY+++C +N I+AA S+VGSIGV+ Q P FL K + ++ + K + Sbjct: 168 VAASGGYMMACTANHIIAAPLSIVGSIGVVGQIPNFHRFLKKQDIDVELHTAGEYKRTLT 227 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLI 224 E + +++++ F V ++R N+ D ++S+G W G +AK+ GLI Sbjct: 228 LLGENTESGRKKFIQDLNNTHLLFKAFVQKNRPNLNID---LVSNGEYWYGIQAKENGLI 284 Query: 225 DVVG 228 D +G Sbjct: 285 DEIG 288 >gi|146276161|ref|YP_001166320.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145554402|gb|ABP69015.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 461 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 1/188 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L +++ + D A+++ L SPGG A A+ +++V KPV+ V++MAASA Sbjct: 104 EGLAKQLTDAAADPKVKAIMLDLDSPGGEATGMFALAAKVREVAAEKPVVAVVNDMAASA 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ + IV + TS+VGSIGV+ + L G+ + + K + +PF + Sbjct: 164 AYGIASQATEIVVSPTSIVGSIGVVLTHLDRSGELAAKGIKPTLIHAGAHKVDGNPFGPL 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGG 229 + +Q V Y FV LV++ R ++ R + G EA GL D V Sbjct: 224 SDAVRADLQAEVGQFYDQFVGLVAQGRGAKLSAAKARATEARTFIGQEAIDRGLADRVST 283 Query: 230 QEEVWQSL 237 E V SL Sbjct: 284 FEAVLASL 291 >gi|88703297|ref|ZP_01101013.1| protease SohB [Congregibacter litoralis KT71] gi|88702011|gb|EAQ99114.1| protease SohB [Congregibacter litoralis KT71] Length = 355 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 3/172 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ +Q+++N+ +T V ++AAS GY+++C +N I+AA + Sbjct: 142 VLLRLESGGGMVHSYGLASSQLQRIRNKGAKLTVAVDKVAASGGYMMACVANQIIAAPFA 201 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + + K + F E K ++ ++ ++ Sbjct: 202 IIGSIGVIAQLPNFHRVLKKNDIDFEVLTAGEYKRTLTIFGENTDKGRDKFKEELEDTHV 261 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 F + V E+R + + ++ G W G AK V L+D + +E Q A Sbjct: 262 LFKQFVKENREVVDIDS--VATGETWYGQRAKAVNLVDELQTSDEYIQDKLA 311 >gi|261379008|ref|ZP_05983581.1| peptidase, S49 family [Neisseria cinerea ATCC 14685] gi|269144540|gb|EEZ70958.1| peptidase, S49 family [Neisseria cinerea ATCC 14685] Length = 350 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q Q ++ ++ Sbjct: 199 IIGSVGVVAEVPNIHRLLKKYDIDVDVMTAGEFKRTVTFMGENTEKGKQKFQQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VSE+R P ++ G W G +A ++ L+D + Sbjct: 259 LFKQFVSENR--PQLDIEKVATGEHWFGRQALELNLVDSI 296 >gi|332533580|ref|ZP_08409442.1| SohB protein, peptidase U7 family [Pseudoalteromonas haloplanktis ANT/505] gi|332036982|gb|EGI73441.1| SohB protein, peptidase U7 family [Pseudoalteromonas haloplanktis ANT/505] Length = 338 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 4/183 (2%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH 104 ++E +E I I I+ + S +++ L S GG + +Q++KN P+ + Sbjct: 104 EVESLREEITAIISIA-NPSKDKVLIRLESGGGVVHGYGLAASQLQRIKNAGIPLSVAID 162 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P L K V + + + K Sbjct: 163 KVAASGGYMMACVADEILAAPFAIVGSIGVIAQIPNFNKILKKNDVEFEQITAGEFKRTL 222 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + F E KA + ++ ++ ++ F VS R P +++ G W +A GL+ Sbjct: 223 TLFGENTDKAREKFREEIEQTHDLFKTFVSTQR--PSLDINLVATGEHWFATQAIDKGLV 280 Query: 225 DVV 227 DV+ Sbjct: 281 DVI 283 >gi|200390711|ref|ZP_03217322.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603156|gb|EDZ01702.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 348 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ +++ Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHYL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + +EV Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEINTSDEV 299 >gi|126726020|ref|ZP_01741862.1| peptidase S49 [Rhodobacterales bacterium HTCC2150] gi|126705224|gb|EBA04315.1| peptidase S49 [Rhodobacterales bacterium HTCC2150] Length = 264 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 8/216 (3%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + D Q L IER A+ + ++SPGGS I I+++ K PV Sbjct: 27 RGGLND-QTLAPMIERAFAKGKPKAVALVINSPGGSPVQSSLISARIRRLSEEKEIPVYA 85 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++CA++ I TS++GSIGV+ + GV + + K Sbjct: 86 FVEDVAASGGYWLACAADQIFVDATSIIGSIGVISASFGFDKVMANYGVERRIHTAGKSK 145 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PFS V+ ++ + + + F+ V R D+ + G IW G +A V Sbjct: 146 SFMDPFSPQKAADVKRIKSLQEPIHQAFINHVQTRRGTRLDENAEMFGGEIWVGQQALDV 205 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 G+ D + + L+ D++ + + + P K+ Sbjct: 206 GIADGIAHVSPKMKELFG---DKT--RFRTYGPKKS 236 >gi|295677195|ref|YP_003605719.1| peptidase S49 [Burkholderia sp. CCGE1002] gi|295437038|gb|ADG16208.1| peptidase S49 [Burkholderia sp. CCGE1002] Length = 333 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 12/243 (4%) Query: 7 KIKTRYVMLSLVTLTV---VYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 +I R++ L ++ L V + FS V H A ++I G+I +++++ ++ Sbjct: 49 RIFFRFLFLGVLALVVWGALSFS-GERVATTGRHTAMVSIDGEIAADSNANAEDVNTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLIS 115 D + +I+ +SPGGS I +++++ + P I V +M AS GY + Sbjct: 108 SAFEDSNTAGVILYCNSPGGSPVQAGIINSEVRRLRGKYPSIPLYVVVGDMCASGGYYAA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A+ I + S+VGSIGVL +DKLG+ + S K PFS PK Sbjct: 168 AAAEKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + Q ++D + F+ V + R +T + G WTG ++ ++GL D G V + Sbjct: 228 EHAQAMLDQIHAQFIDAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGFGDTNYVAR 287 Query: 236 SLY 238 ++ Sbjct: 288 EIF 290 >gi|213423129|ref|ZP_03356144.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 296 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 3/159 (1%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 137 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 196 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 197 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 256 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V R P ++ G W G +A + GL+D + Sbjct: 257 FKEFVQRMR--PALDIEQVATGEHWYGQQALEKGLVDEI 293 >gi|111021003|ref|YP_703975.1| signal peptide peptidase [Rhodococcus jostii RHA1] gi|110820533|gb|ABG95817.1| possible signal peptide peptidase [Rhodococcus jostii RHA1] Length = 288 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 3/197 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITE 102 G++ ++ + E + R A A+ + ++SPGGS E I I+++ ++ PV+ Sbjct: 45 GRVLSAESVEEPLRRAFTTHGAKAVALLINSPGGSPTQSEYIAARIRQLATEHELPVLAF 104 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ++ AS GY ++CA++ I A TS+VGS+GV+ +D+LG+ + + KA Sbjct: 105 CEDVVASGGYWLACAADEIYATATSVVGSVGVISAGFGFSELIDRLGIERRLHSAGEAKA 164 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 PF + VQ ++ + + + F V R N L +G +W G A ++ Sbjct: 165 RLDPFFAEKSEDVQWLEQIQEGIHDEFRDWVVGRRGNKLKADGAELFNGDVWLGRRAVEL 224 Query: 222 GLIDVVGGQEEVWQSLY 238 G++D +G EV + + Sbjct: 225 GIVDGIGTLREVVEKRF 241 >gi|300723345|ref|YP_003712648.1| putative peptidase [Xenorhabdus nematophila ATCC 19061] gi|297629865|emb|CBJ90483.1| putative peptidase [Xenorhabdus nematophila ATCC 19061] Length = 348 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV-HEMAASAGYLISCASNIIV 122 D +++ L SPGG + + +++ + +T V ++AAS GY+++C ++ I+ Sbjct: 131 DKKDEVLLRLESPGGMVHGYGLAASQLTRLRQKGIRLTVVVDKVAASGGYMMACVADRII 190 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA +++GSIGV+ Q P + L K + ++ + K + F E + + Q+ + Sbjct: 191 AAPFAIIGSIGVVAQLPNIHRLLKKNDIDVELHTAGEYKRTLTMFGENTEQGRKKFQEDL 250 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ F + + R P ++ G W G +AK+ GLID VG Sbjct: 251 NETHKLFKSFIYQHR--PSLDVESVATGEYWYGTQAKEHGLIDEVG 294 >gi|78485025|ref|YP_390950.1| peptidase S49 [Thiomicrospira crunogena XCL-2] gi|78363311|gb|ABB41276.1| protein C. Serine peptidase. MEROPS family S49 [Thiomicrospira crunogena XCL-2] Length = 463 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 1/187 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 Q++ E + + DD+ +++ SPGGSA + I + +K +I V +MA SA Sbjct: 98 QDIKEDFDELMADDNIKTIVLRCDSPGGSASGVMDLSDHIFNSRGQKKIIAIVDDMAYSA 157 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A + I + TS +GSIGV+ + F K+GV ++ + + K +P + Sbjct: 158 MYAIASACDEIYVSRTSGIGSIGVVTYHIDQSEFDKKIGVKVEFIYAGDKKVAGNPHEPL 217 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +A MQ +D Y FV V+ +RN+ K G + G VGL D +G Sbjct: 218 SDQARTDMQTEIDRLYDIFVATVARNRNMDEQKVRDTQAGCFY-GDTGIAVGLADKLGTF 276 Query: 231 EEVWQSL 237 EV +L Sbjct: 277 SEVIGNL 283 >gi|322513452|ref|ZP_08066564.1| protease SohB [Actinobacillus ureae ATCC 25976] gi|322120743|gb|EFX92624.1| protease SohB [Actinobacillus ureae ATCC 25976] Length = 350 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 138 VLLKLESPGGVVHGYGLAASQLQRLRDHNIPLTVAVDKVAASGGYMMACVANKIVSAPFA 197 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ Q P + L K + + + + K + E K Q Q ++ ++ Sbjct: 198 IIGSVGVVAQVPNIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHE 257 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + V+++R P + ++ G W G +A + L+D Sbjct: 258 LFKQFVAQNR--PQLEIEKIATGEHWFGKQALALNLVD 293 >gi|251789767|ref|YP_003004488.1| putative periplasmic protease [Dickeya zeae Ech1591] gi|247538388|gb|ACT07009.1| Peptidase S49 domain protein [Dickeya zeae Ech1591] Length = 348 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+ + R +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRFRQRGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + + ++ ++ Sbjct: 196 IVGSIGVVAQIPNFNRLLKSKEIDVELHTAGQYKRTLTLFGENTEEGREKFRQELNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F + V E R P ++ G W G +AK++GL+D +G Sbjct: 256 LFKQFVGEMR--PSLDIESVATGEHWFGTQAKEMGLVDAIG 294 >gi|219871521|ref|YP_002475896.1| putative periplasmic protease [Haemophilus parasuis SH0165] gi|219691725|gb|ACL32948.1| putative periplasmic protease, secreted serine protease [Haemophilus parasuis SH0165] Length = 351 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++K++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 139 VLLKLESPGGVVHGYGLAASQLQRLKDKSIPLTVAVDKVAASGGYMMACVANKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ Q P + L K + + + + K + E K Q Q ++ ++ Sbjct: 199 VIGSVGVVAQVPNIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHR 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + V++ R P ++ G W G +A + L+D Sbjct: 259 LFKQFVAQHR--PQLDIEKIATGEHWFGQQAVEFNLVD 294 >gi|254448773|ref|ZP_05062230.1| probable protease SohB [gamma proteobacterium HTCC5015] gi|198261614|gb|EDY85902.1| probable protease SohB [gamma proteobacterium HTCC5015] Length = 354 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 5/170 (2%) Query: 65 SATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 S ++V L S GG ++ G A + ++ + P+ V ++AAS GY+++C +N IVA Sbjct: 136 SEDEVVVRLESAGGMVHSYGLASSQLLRIRQKELPLTICVDKVAASGGYMMACVANHIVA 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P L K + + + + K + F E K + ++ ++ Sbjct: 196 APFAILGSIGVVAQIPNFHRVLKKHDIDFELITAGEHKRTLTMFGENTDKGREKFREDIE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ F V E+R +P D ++ G +W G++A + LID + +E Sbjct: 256 DTHGLFKDFVQENRPAVPID---AVATGEVWFGSKALEQQLIDKIATSDE 302 >gi|238898830|ref|YP_002924512.1| putative peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466590|gb|ACQ68364.1| putative peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 348 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 12/173 (6%) Query: 60 ISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 ++++DS + + L SPGG + G A A Q + R+ ++ V ++AAS GY+++ Sbjct: 130 MTKEDS---VFLRLESPGGVVHGYGLA---ASQLARFRQAGVSLVVSVDKIAASGGYMMA 183 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 C + I++A +++GSIGV+ Q P FL K + ++ + K + F E + Sbjct: 184 CVGDHILSAPFAIIGSIGVVAQIPNFHRFLQKNNIDVELHTAGEFKRTLTVFGENTEQGR 243 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + ++ ++ F + V E R P +S G W G +AK+ GL+D +G Sbjct: 244 EKFCEELNETHLLFKQFVQEKR--PQIDINTVSTGEHWFGVQAKEKGLVDSIG 294 >gi|109898498|ref|YP_661753.1| putative periplasmic protease [Pseudoalteromonas atlantica T6c] gi|109700779|gb|ABG40699.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Pseudoalteromonas atlantica T6c] Length = 344 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + +Q++K++ P+ V ++AAS GY+++C ++ ++AA+ + Sbjct: 132 VLVRLESGGGVVHGYGLAASQLQRLKDKDIPLTVAVDKVAASGGYMMACVADNVLAAKFA 191 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + K + F E + + + +D ++ + Sbjct: 192 IIGSIGVIAQIPNFNKLLKKNDIEFEQHTAGQFKRTLTMFGENSDEGREKFRDELEDVHQ 251 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V E R P ++ G W G++A +GL+D + Sbjct: 252 MFKGFVQEHR--PALAIDTVATGEYWYGSKALDLGLVDTI 289 >gi|325198698|gb|ADY94154.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis G2136] Length = 350 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+I V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLIVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 294 >gi|292492693|ref|YP_003528132.1| peptidase S49 domain protein [Nitrosococcus halophilus Nc4] gi|291581288|gb|ADE15745.1| Peptidase S49 domain protein [Nitrosococcus halophilus Nc4] Length = 325 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 83/159 (52%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L + GG + +++++ ++ P+ V +MAAS GY+++C N I+AA + Sbjct: 122 VLLRLENGGGLVHEHGLAASQLERIRKKQIPLTIAVDKMAASGGYMMACVGNRIIAAPFA 181 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIG L Q P LDK G+ + +K+ +K + F + ++ + V+ + Sbjct: 182 VIGSIGALMQLPNFHRLLDKHGIDFEQIKAGELKRTVTLFGINTDRDRELAKKQVEDIHQ 241 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F ++ R + +T + G+ W +A+++ LID Sbjct: 242 LFKEFITHYRPQVDLSQT---ATGQHWHAIQAQELNLID 277 >gi|260914078|ref|ZP_05920551.1| S49 family peptidase [Pasteurella dagmatis ATCC 43325] gi|260631711|gb|EEX49889.1| S49 family peptidase [Pasteurella dagmatis ATCC 43325] Length = 351 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 6/207 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIER---ISRDDSATALIVSLSSPGGSAYA-GEAI 86 + + PH+ + +G I S+ R E I +++ L SPGG + G A Sbjct: 98 INERKPHLYVLNFKGDISASETTALREEISAIIGVAQPEDEVLLRLESPGGVVHGYGLAA 157 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + K+ + V ++AAS GY+++C ++ IVAA +++GS+GV+ Q P + L Sbjct: 158 SQLARLKKHNIKLTIAVDKVAASGGYMMACVADKIVAAPFAILGSVGVVAQIPNIHRLLK 217 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K V + + + K + E K Q Q ++ ++ F + V+++R P+ Sbjct: 218 KHDVDVDVMTAGEYKRTVTLLGENTEKGKQKFQQELEETHDLFKQFVAQNR--PHLDVNK 275 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ G W G +A ++ L+D + +++ Sbjct: 276 IATGEHWFGQQALELNLVDEIATSDDL 302 >gi|88800083|ref|ZP_01115653.1| probable protease [Reinekea sp. MED297] gi|88777209|gb|EAR08414.1| probable protease [Reinekea sp. MED297] Length = 334 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 12/202 (5%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIER---ISRDDSATALIVSLSSPGGSAYAGEAIF 87 VE + P + +G I+ SQ R E ++ +I+++ SPGGS Sbjct: 84 VESDRPKAYALKFKGDIQASQVEALRQEVTAILTTAKEGEEVIITIESPGGSVSGYGLAA 143 Query: 88 RAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K++ +T V ++AAS GY+++C ++ I+AA S+VGSIGVL Q P + FL Sbjct: 144 SQLLRLKDKGLKLTACVDQVAASGGYMMACVADRILAAPFSIVGSIGVLSQVPNIHRFLK 203 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF---VRLVSESRNIPYDK 203 + V + + + KA + E + Q D +++ + F V+L E NI Sbjct: 204 RFDVDVDVLTAGKHKAPITFMGENTEEGKQKHVDDLNAIHQRFKALVKLHREELNIDD-- 261 Query: 204 TLVLSDGRIWTGAEAKKVGLID 225 +S+G W +A + L+D Sbjct: 262 ---VSEGDFWLAEDALQRKLVD 280 >gi|331006608|ref|ZP_08329895.1| SohB protein, peptidase U7 family [gamma proteobacterium IMCC1989] gi|330419592|gb|EGG93971.1| SohB protein, peptidase U7 family [gamma proteobacterium IMCC1989] Length = 359 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +VK++K P+ V ++AAS GY+++C ++ I AA + Sbjct: 146 VVIRLESAGGMVHSYGLASSQLARVKDKKIPLTVCVDKVAASGGYMMACVADTICAAPFA 205 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K V + + K + F E K + + +++++ Sbjct: 206 ILGSIGVVAQLPNFHRLLKKNDVDFELFTAGEYKRTLTMFGENTDKGREKFTEDLETTHE 265 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V E R + DK ++ G IW G++AK+ L+D Sbjct: 266 LFKDFVREQRPVVDIDK---VATGEIWFGSQAKEQQLVD 301 >gi|299532484|ref|ZP_07045874.1| peptidase S49 [Comamonas testosteroni S44] gi|298719431|gb|EFI60398.1| peptidase S49 [Comamonas testosteroni S44] Length = 348 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 7/213 (3%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPG 77 V+F ++ SPH A + I+G+I + S E + R + +DS + A+++ ++SPG Sbjct: 84 VFFKDTATKTSTSPHTAVVEIKGEIASGADASAEFVVAAMRSAFEDSGSRAVVLLINSPG 143 Query: 78 GSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS I + ++K + KP+ V E ASA Y I+ A++ I + S+VGSIGVL Sbjct: 144 GSPVQAGIINDEMTRLKAKYNKPLYAVVEESCASAAYYIAAAADEIFVDKASIVGSIGVL 203 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 +DK+GV + + + K PFS ++ + + +++ + F+ +V Sbjct: 204 MDGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSAQQKEFALQMLEQIHQQFIGVVKA 263 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R +T + G WTG +A ++GL D +G Sbjct: 264 GRGDRLHETPEMFSGLFWTGQQAVELGLADKLG 296 >gi|167856276|ref|ZP_02479008.1| putative protease SohB [Haemophilus parasuis 29755] gi|167852600|gb|EDS23882.1| putative protease SohB [Haemophilus parasuis 29755] Length = 351 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++K++ P+ V ++AAS GY+++C +N IV+A + Sbjct: 139 VLLKLESPGGVVHGYGLAASQLQRLKDKSIPLTVAVDKVAASGGYMMACVANKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ Q P + L K + + + + K + E K Q Q ++ ++ Sbjct: 199 VIGSVGVVAQVPNIHRLLKKHDIDVDVMTAGEYKRTVTFVGENTEKGKQKFQQELEETHR 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + V++ R P ++ G W G +A + L+D Sbjct: 259 LFKQFVAQHR--PQLDIEKIATGEHWFGQQAVEFNLVD 294 >gi|261343650|ref|ZP_05971295.1| peptidase, S49 family [Providencia rustigianii DSM 4541] gi|282568033|gb|EFB73568.1| peptidase, S49 family [Providencia rustigianii DSM 4541] Length = 348 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 3/166 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIV 122 D +++ L SPGG + + ++K + +T V ++AAS GY+++C +N IV Sbjct: 131 DQQDEVLLRLESPGGLVHGYGLAASQLMRLKEKNISLTIAVDKVAASGGYMMACIANKIV 190 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA S++GSIGV+ Q P + L K V ++ + K + E + + + + Sbjct: 191 AAPFSIIGSIGVVAQVPNIHRLLKKHDVDVELHTAGEYKRTLTMLGENTEQGRKKFVEDL 250 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +S++ F V ++R P ++ G W G +A + GL+D +G Sbjct: 251 NSTHELFKDFVHQNR--PSLDIAAVATGEYWYGTQALEKGLVDEIG 294 >gi|53729128|ref|ZP_00134093.2| COG0616: Periplasmic serine proteases (ClpP class) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207496|ref|YP_001052721.1| putative periplasmic protease [Actinobacillus pleuropneumoniae L20] gi|126096288|gb|ABN73116.1| putative protease SohB [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 351 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N IV+A +++GS+GV+ Q P + L K + + + + K + E K Q Sbjct: 190 NKIVSAPFAIIGSVGVVAQVPNIHRLLKKHEIDVDVMTAGEYKRTVTLVGENTEKGKQKF 249 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++ ++ F + V+++R P ++ G W G +A + L+D Sbjct: 250 QQELEETHQLFKQFVAQNR--PQLDIEKIATGEHWFGKQALALDLVD 294 >gi|254476437|ref|ZP_05089823.1| peptidase S49 [Ruegeria sp. R11] gi|214030680|gb|EEB71515.1| peptidase S49 [Ruegeria sp. R11] Length = 265 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 7/189 (3%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS----AYAGEAIFRAIQKVKNR 96 +A RG + D L +ER R A+ ++SPGGS A G I R Q++K Sbjct: 25 MAGRGALNDVT-LAPVLERAFRKGKPAAVAFEINSPGGSPVQSALIGARIRRLSQELKV- 82 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 P + V ++AAS GY ++ +++ I A ++S+VGSIGV+ L + GV + Sbjct: 83 -PTLAFVEDVAASGGYWLAASADEIYADDSSVVGSIGVISAGFGAHVLLARQGVERRVYT 141 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K+ PF NP+ V +++++ + F+ V + R + L G IW G Sbjct: 142 AGKSKSMLDPFRPENPEDVARLKELLGDIHENFITHVKDRRGDKLVQDQDLFTGEIWLGR 201 Query: 217 EAKKVGLID 225 A +GLID Sbjct: 202 RAVSLGLID 210 >gi|298370239|ref|ZP_06981555.1| signal peptide peptidase SppA, 36K type [Neisseria sp. oral taxon 014 str. F0314] gi|298281699|gb|EFI23188.1| signal peptide peptidase SppA, 36K type [Neisseria sp. oral taxon 014 str. F0314] Length = 328 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 11/209 (5%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 V + H A I +RG I DS+ L E +E ++ +A A+I+ +SPGGS Sbjct: 72 VSASGAHTAVINLRGAIGDSEFDDQVKALRESMEAAYKNKNAKAIIIRANSPGGSPVISN 131 Query: 85 AIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 F I+++K PV EM AS Y I+ A++ I A +S+VGSIGV+ Sbjct: 132 IAFNEIRRLKEAHKNIPVYVVAEEMCASGCYYIAAAADKIYADPSSVVGSIGVIGGGFDA 191 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--I 199 +DK+GV + + K PFS P+ ++ ++ + F++ V R + Sbjct: 192 TGLMDKIGVKRRLKTAGSNKGMGDPFSPETPEQTKIWNAMLADIHGEFIKAVKLGRGSRL 251 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + GRI+TG EAK+ GLID G Sbjct: 252 KEKENPDIFSGRIYTGIEAKQAGLIDDFG 280 >gi|83941426|ref|ZP_00953888.1| peptidase, family protein S49 [Sulfitobacter sp. EE-36] gi|83847246|gb|EAP85121.1| peptidase, family protein S49 [Sulfitobacter sp. EE-36] Length = 250 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 3/187 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + DS + I++ A+++ +SSPGGS I I+++ K PVI Sbjct: 13 RGGLNDSG-IGPAIDKAFNRGKPAAVVLEISSPGGSPVQSSLIGARIRRLAEEKNIPVIA 71 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ A++ I A +S++GSIGV+ F+ + GV + + K Sbjct: 72 FVEDVAASGGYWLAAAADEIYADPSSVLGSIGVISASFGADEFIQRHGVERRVYTAGQSK 131 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF P+ V ++ +++ + F+ V+ R L G +W A ++ Sbjct: 132 SMLDPFRPEKPEDVARLKQLLEDIHGNFIDHVTSRRGSKLSSDSDLFTGEVWLAKRATEL 191 Query: 222 GLIDVVG 228 GLID +G Sbjct: 192 GLIDGIG 198 >gi|264677100|ref|YP_003277006.1| peptidase S49 [Comamonas testosteroni CNB-2] gi|262207612|gb|ACY31710.1| peptidase S49 [Comamonas testosteroni CNB-2] Length = 302 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 7/213 (3%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPG 77 V+F ++ SPH A + I+G+I + S E + R + +DS + A+++ ++SPG Sbjct: 38 VFFKDTATKTSTSPHTAVVEIKGEIASGADASAEFVVAAMRSAFEDSGSRAVVLLINSPG 97 Query: 78 GSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS I + ++K + KP+ V E ASA Y I+ A++ I + S+VGSIGVL Sbjct: 98 GSPVQAGIINDEMTRLKAKYNKPLYAVVEESCASAAYYIAAAADEIFVDKASIVGSIGVL 157 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 +DK+GV + + + K PFS ++ + + +++ + F+ +V Sbjct: 158 MDGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSAQQKEFALQMLEQIHQQFIGVVKA 217 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R +T + G WTG +A ++GL D +G Sbjct: 218 GRGDRLHETPEMFSGLFWTGQQAVELGLADKLG 250 >gi|304393460|ref|ZP_07375388.1| Na(+)/H(+) antiporter NhaA [Ahrensia sp. R2A130] gi|303294467|gb|EFL88839.1| Na(+)/H(+) antiporter NhaA [Ahrensia sp. R2A130] Length = 294 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 6/188 (3%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYL 113 R++R A + + ++SPGGS I++ I+ + ++ K V V + AAS GY+ Sbjct: 51 RLKRAFEMKEAPCVAIIVNSPGGSPVQSRLIYQRIRDLATEHDKKVHVFVEDAAASGGYM 110 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+CA + I A +S++GSIGV+ ++KLGV + + K+ PF + Sbjct: 111 IACAGDQITADPSSIIGSIGVVSSGFGFVGAINKLGVERRVHTAGLNKSVLDPFLPEKAQ 170 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ ++++ + F+ LV SR+ + DK++ G WT AK +GLID +G Sbjct: 171 DIKRLKELQLEIHGVFIDLVKASRSDKLVEDKSMF--TGMFWTAGPAKDMGLIDGIGDLR 228 Query: 232 EVWQSLYA 239 + Y Sbjct: 229 GTLRGFYG 236 >gi|260598142|ref|YP_003210713.1| putative inner membrane peptidase [Cronobacter turicensis z3032] gi|260217319|emb|CBA31301.1| Probable protease sohB [Cronobacter turicensis z3032] Length = 349 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 3/161 (1%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAA 124 A +++ L SPGG + +Q+++ R+ P+ V ++AAS GY+++C +N IVAA Sbjct: 134 ADEVLLRLESPGGVVHGYGLAASQLQRLRERQIPLTIAVDKVAASGGYMMACVANKIVAA 193 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +++GSIGV+ Q P L + + I+ + K + E + + ++ ++ Sbjct: 194 PFAIIGSIGVVAQIPNFNRLLKRNDIDIELHTAGQYKRTLTLLGENTEEGREKFREDLNE 253 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ F V R P ++ G W G +A++ GL+D Sbjct: 254 THQLFKEFVHSMR--PSLDIEAVATGEHWYGVQAQEKGLVD 292 >gi|158422526|ref|YP_001523818.1| periplasmic serine protease [Azorhizobium caulinodans ORS 571] gi|158329415|dbj|BAF86900.1| periplasmic serine protease [Azorhizobium caulinodans ORS 571] Length = 296 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 14/220 (6%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF---RAIQKVKNRKPVITEVHEM 106 + L++R + R A A+ + ++SPGGS IF RA+ + KN++ V V ++ Sbjct: 52 TARLLDRAFAVKR---APAVALVINSPGGSPVQSNLIFKRIRALAEEKNKR-VFAFVEDV 107 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY+++CA++ I A +S+VGSIGV+ L ++GV + + K P Sbjct: 108 AASGGYMLACAADEIYADPSSIVGSIGVVSAGFGFNDMLSRIGVERRVHTAGTRKVMLDP 167 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + V + + + F LV R + + L G W GA+A +GLID Sbjct: 168 FQPERAEDVDRLLAIQREVHASFRDLVRSRRGALLKGEEDDLFSGEFWVGAQALPMGLID 227 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 +G V + + G D I P WF N Sbjct: 228 GLGDLRSVLRERF--GTDVRTPLIA----PSGNWFTRRAN 261 >gi|218699982|ref|YP_002407611.1| putative periplasmic protease [Escherichia coli IAI39] gi|218369968|emb|CAR17742.1| putative inner membrane peptidase [Escherichia coli IAI39] Length = 349 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 3/174 (1%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+ Sbjct: 133 SQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVS 192 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A ++VGSIGV+ Q P FL + I+ + K + E + + ++ ++ Sbjct: 193 APFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELN 252 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 253 ETHQLFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|91210563|ref|YP_540549.1| putative periplasmic protease [Escherichia coli UTI89] gi|110641504|ref|YP_669234.1| putative periplasmic protease [Escherichia coli 536] gi|117623532|ref|YP_852445.1| putative periplasmic protease [Escherichia coli APEC O1] gi|191170896|ref|ZP_03032447.1| peptidase, S49 (protease IV) family [Escherichia coli F11] gi|218558258|ref|YP_002391171.1| periplasmic protease [Escherichia coli S88] gi|237705296|ref|ZP_04535777.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300971798|ref|ZP_07171632.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|306813705|ref|ZP_07447886.1| putative periplasmic protease [Escherichia coli NC101] gi|91072137|gb|ABE07018.1| possible protease SohB [Escherichia coli UTI89] gi|110343096|gb|ABG69333.1| possible protease SohB [Escherichia coli 536] gi|115512656|gb|ABJ00731.1| possible protease SohB [Escherichia coli APEC O1] gi|190908628|gb|EDV68216.1| peptidase, S49 (protease IV) family [Escherichia coli F11] gi|218365027|emb|CAR02730.1| putative inner membrane peptidase [Escherichia coli S88] gi|222033076|emb|CAP75816.1| protease sohB [Escherichia coli LF82] gi|226900053|gb|EEH86312.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294493202|gb|ADE91958.1| peptidase, S49 (protease IV) family [Escherichia coli IHE3034] gi|300309304|gb|EFJ63824.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|305852979|gb|EFM53424.1| putative periplasmic protease [Escherichia coli NC101] gi|307627154|gb|ADN71458.1| putative periplasmic protease [Escherichia coli UM146] gi|312945906|gb|ADR26733.1| putative periplasmic protease [Escherichia coli O83:H1 str. NRG 857C] gi|315289110|gb|EFU48508.1| putative signal peptide peptidase SppA [Escherichia coli MS 110-3] gi|323949125|gb|EGB45017.1| peptidase S49 [Escherichia coli H252] gi|323953857|gb|EGB49658.1| peptidase S49 [Escherichia coli H263] gi|324006118|gb|EGB75337.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2] gi|324011315|gb|EGB80534.1| putative signal peptide peptidase SppA [Escherichia coli MS 60-1] Length = 349 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 8/212 (3%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAI 86 V D+ P V + +G + D+ E+ E I+ +A +++ L SPGG + Sbjct: 96 VTDSKPRVWVLDFKGSM-DAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLA 154 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL Sbjct: 155 ASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFL 214 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 215 KSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIE 272 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A + GL+D + +EV SL Sbjct: 273 QVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|315634187|ref|ZP_07889476.1| protease SohB [Aggregatibacter segnis ATCC 33393] gi|315477437|gb|EFU68180.1| protease SohB [Aggregatibacter segnis ATCC 33393] Length = 352 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + G A + ++ ++ + V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLCLESPGGVVHGYGLAASQLMRLKQHNIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + L K V + + + K + E K Q Q ++ ++ Sbjct: 200 IIGSIGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTVTMLGENTEKGKQKFQQELEETHQ 259 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VS++R P+ ++ G W G +A + L+D Sbjct: 260 LFKQFVSQNR--PHLDVEQVATGEHWFGQQALNLNLVD 295 >gi|315297262|gb|EFU56542.1| putative signal peptide peptidase SppA [Escherichia coli MS 16-3] Length = 349 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINASDEVILSL 304 >gi|259418110|ref|ZP_05742029.1| peptidase S49 [Silicibacter sp. TrichCH4B] gi|259347016|gb|EEW58830.1| peptidase S49 [Silicibacter sp. TrichCH4B] Length = 298 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 3/201 (1%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--P 98 +A RG + D+ L +ER + A+ + ++SPGGS I I+++ P Sbjct: 58 MAGRGSLNDTT-LAPVLERAFKKGKPQAVALEINSPGGSPVQSALIGARIRRLAEEHDVP 116 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V V ++AAS GY ++ A++ I A +S+VGSIGV+ FL + G+ + + Sbjct: 117 VFAFVEDVAASGGYWLAAAADEIFADASSVVGSIGVISSGFGAHIFLARQGLERRVHTAG 176 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ PF N V ++ +++ + F+ V+E R L G +W A Sbjct: 177 ESKSMLDPFRPENEGDVARLKVLLNDIHANFIEHVTERRGTKLTSDEKLFTGEVWLARRA 236 Query: 219 KKVGLIDVVGGQEEVWQSLYA 239 +GLID +G + V Q + Sbjct: 237 IGLGLIDGIGHLKPVLQERFG 257 >gi|257465744|ref|ZP_05630115.1| putative periplasmic protease [Actinobacillus minor 202] gi|257451404|gb|EEV25447.1| putative periplasmic protease [Actinobacillus minor 202] Length = 350 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++K + P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLKLESPGGVVHGYGLAASQLQRLKAKNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + L K + + + + K + E K Q Q ++ ++ Sbjct: 199 VIGSIGVVAQVPNIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHD 258 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V++ R + DK ++ G W G +A + L+D + +++ Sbjct: 259 LFKQFVTQHRPQLNIDK---IATGEHWFGQQALALNLVDEIATSDDL 302 >gi|254514364|ref|ZP_05126425.1| peptidase S49 [gamma proteobacterium NOR5-3] gi|219676607|gb|EED32972.1| peptidase S49 [gamma proteobacterium NOR5-3] Length = 355 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 88/168 (52%), Gaps = 3/168 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ +Q+++ + +T V ++AAS GY+++C +N I+AA + Sbjct: 142 VLLRLESGGGMVHSYGLASSQLQRIRAKGVKLTVAVDKVAASGGYMMACVANEIIAAPFA 201 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + + K + F E K + ++ ++ ++ Sbjct: 202 IIGSIGVVAQLPNFHRVLKKNDIDVEILTAGEYKRTLTVFGENTDKGREKFKEELEDTHV 261 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 F + V E+R + + ++ G W G AK V L+D + +E Q Sbjct: 262 LFKQFVKENREVVEIDS--VATGETWYGQRAKDVNLVDAIQTSDEYIQ 307 >gi|170717550|ref|YP_001784638.1| periplasmic protease [Haemophilus somnus 2336] gi|168825679|gb|ACA31050.1| Peptidase S49 domain protein [Haemophilus somnus 2336] Length = 352 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 105/209 (50%), Gaps = 12/209 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E PH+ + +G I S+ E I I ++++D +++ L SPGG + Sbjct: 100 EKRKPHLFVLHFKGDISASETTALREEISAIIAVAKEDDE--VLLRLESPGGVVHGYGLA 157 Query: 87 FRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K R +T V ++AAS GY+++C ++ I++A +++GSIGV+ Q P + L Sbjct: 158 ASQLARLKQRNIKLTVAVDKVAASGGYMMACVADKIISAPFAIIGSIGVVAQIPNIHRLL 217 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKT 204 K + + + + K + E K Q ++ ++ F + V+++R ++ DK Sbjct: 218 KKHDIDVDVMTAGEYKRTMTILGENTEKGKAKFQQDLEDTHLLFKQFVTQNRPHLDIDK- 276 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ G W G +A + L+D + +++ Sbjct: 277 --IATGEHWFGKQALALHLVDEIATSDDL 303 >gi|160900710|ref|YP_001566292.1| peptidase S49 [Delftia acidovorans SPH-1] gi|160366294|gb|ABX37907.1| peptidase S49 [Delftia acidovorans SPH-1] Length = 348 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 7/224 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSAT 67 + L LV L V++ ++ +SPH A + ++G+I + S E + R + +DS + Sbjct: 73 WTALILVVLWVLFAKDTATTTSSSPHTAVVEVKGEIAAGADASAEFVVAAMRSAFEDSGS 132 Query: 68 -ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAA 124 A+++ ++SPGGS I I ++K + KP+ V E ASA Y I+ A++ I Sbjct: 133 RAVVLLINSPGGSPVQAGIINDEIVRLKGKYDKPLYAVVEETCASAAYYIAAAADEIFVD 192 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + S+VGSIGVL ++KLGV + + + K PFS ++ + ++ Sbjct: 193 KASIVGSIGVLMDGFGFTGAMEKLGVERRLLTAGENKGFLDPFSPMSEGQREHAHKMLGQ 252 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ +V R +T G WTG +A ++GL D +G Sbjct: 253 IHSQFINVVKAGRGDRLHETPETFSGLFWTGQQAVEMGLADKLG 296 >gi|290470|gb|AAA24639.1| sohB [Escherichia coli str. K-12 substr. W3110] Length = 349 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINASDEVILSL 304 >gi|312882440|ref|ZP_07742181.1| putative periplasmic protease [Vibrio caribbenthicus ATCC BAA-2122] gi|309369840|gb|EFP97351.1| putative periplasmic protease [Vibrio caribbenthicus ATCC BAA-2122] Length = 353 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 12/201 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ED +PH+ + +G I+ + E I I +++D + +++ L S GG + Sbjct: 101 EDRAPHLFVLDFKGSIDAKEVSSLREEITAILAVAKD--SDEVLLRLESGGGMVHGYGLA 158 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 159 SSQLDRIKAANIPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQMPNFNKVL 218 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKT 204 K + + + + K + F E KA + ++ ++ F + + R ++ +K Sbjct: 219 KKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHGLFKDFIRQRRPDLELEK- 277 Query: 205 LVLSDGRIWTGAEAKKVGLID 225 ++ G W G +A ++GL+D Sbjct: 278 --VATGEHWFGTQAHELGLVD 296 >gi|294340242|emb|CAZ88614.1| putative phage minor capsid protein C [Thiomonas sp. 3As] Length = 307 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 11/176 (6%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 + + + SPGGS + F K+ + KP V+ A SA YL++ A + + + T Sbjct: 108 IALDIDSPGGSV---QGAFELAGKIAQATKPTTAIVNFNALSAAYLLASACDSVSVSSTG 164 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK---AEPSPFSEVNPKAVQMMQDVVDS 184 VGS+GV+ + + DK GV I +V K A +P SEV A Q +Q VD Sbjct: 165 AVGSVGVVAMHRDLSGANDKAGVKITAVYRGDKKLHGASHAPLSEV---AQQELQAQVDD 221 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ FV VS RN+P D+ + L G ++ GA+A GL D + +E L L Sbjct: 222 AFDQFVAAVSTHRNLPADRVVGLQAG-VFHGADALSQGLADQMETPQEAIDRLAGL 276 >gi|288940470|ref|YP_003442710.1| peptidase S49 [Allochromatium vinosum DSM 180] gi|288895842|gb|ADC61678.1| peptidase S49 [Allochromatium vinosum DSM 180] Length = 336 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 19/247 (7%) Query: 10 TRYVMLSLVTLTVVYFS-----WSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRD 63 T + +L LV L V + S V+ H A I I+G I DS +R+ R Sbjct: 45 TAFKLLILVYLIGVLIAANSTGLSDAVKVGEDHTALIEIKGVIASDSDASADRVITALRA 104 Query: 64 ----DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---------KPVITEVHEMAASA 110 +++ ++SPGGS I I+++K + PV ++ AS Sbjct: 105 AFEAKHVKGIVLRINSPGGSPVQAGYINDEIKRLKAKYKKDHDGKDMPVYAVAVDLCASG 164 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++ ++ I + SLVGSIGV + + +LG+ + + + K PFS + Sbjct: 165 GYYVAVGADAIYVDKASLVGSIGVRIDSFGFQEAMQELGIERRLLTAGANKGILDPFSPL 224 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 +Q V+D + F+ V + R L G W+G EA ++GL D +G Sbjct: 225 GDSQRAFIQSVLDRLHGQFIDAVKQGRGDKLKGGDELFSGLFWSGQEAVELGLADGLGSS 284 Query: 231 EEVWQSL 237 +V + L Sbjct: 285 SQVAREL 291 >gi|218689262|ref|YP_002397474.1| putative periplasmic protease [Escherichia coli ED1a] gi|218426826|emb|CAR07676.2| putative inner membrane peptidase [Escherichia coli ED1a] Length = 349 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 8/212 (3%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAI 86 V D+ P V + +G + D+ E+ E I+ +A +++ L SPGG + Sbjct: 96 VTDSKPRVWVLDFKGSM-DAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLA 154 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL Sbjct: 155 ASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFL 214 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 215 KSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIE 272 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A + GL+D + +EV SL Sbjct: 273 QVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|268589496|ref|ZP_06123717.1| peptidase, S49 family [Providencia rettgeri DSM 1131] gi|291315164|gb|EFE55617.1| peptidase, S49 family [Providencia rettgeri DSM 1131] Length = 348 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 7/185 (3%) Query: 49 DSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV 103 D++E+ E IS D +++ L SPGG + + ++K + P+ V Sbjct: 112 DAREVASLREEISAILAVADQQDEVLLRLESPGGMVHGYGLAASQLLRIKEKNIPLTIAV 171 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + L K V ++ + K Sbjct: 172 DKVAASGGYMMACIADKIIAAPFAIIGSIGVVAQIPNIHRLLKKHDVDVELHTAGEYKRT 231 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + E + + + ++S++ F + V ++R P ++ G W G++A GL Sbjct: 232 LTMLGENTEQGRKKFVEDLNSTHELFKQFVHQNR--PSLDISAVATGEYWYGSQALDKGL 289 Query: 224 IDVVG 228 +D +G Sbjct: 290 VDNIG 294 >gi|119469274|ref|ZP_01612213.1| predicted inner membrane peptidase [Alteromonadales bacterium TW-7] gi|119447138|gb|EAW28407.1| predicted inner membrane peptidase [Alteromonadales bacterium TW-7] Length = 313 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 4/183 (2%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH 104 ++E +E I I I+ D +++ L S GG + +Q++K+ P+ + Sbjct: 79 EVESLREEITAIISIA-DPKKDKVLIRLESGGGVVHGYGLAASQLQRIKSAGIPLSVSID 137 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P L K V + + + K Sbjct: 138 KVAASGGYMMACVADEILAAPFAIVGSIGVIAQIPNFNKILKKNDVEFEQITAGEFKRTL 197 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + F E KA + +D ++ ++ F VS R P ++ G W +A + GL+ Sbjct: 198 TLFGENTDKAREKFRDEIEQTHDLFKTFVSSQR--PSLNIDQVATGEHWFATQAIEKGLV 255 Query: 225 DVV 227 DV+ Sbjct: 256 DVI 258 >gi|14189731|gb|AAK54346.1| probe 6 protein [Chlamydomonas reinhardtii] Length = 721 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 38/193 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMA 107 D+ +L+ + I D+ A++V ++SPGGSA A ++I R +Q++K K V+ + ++A Sbjct: 439 DAAKLVADLRTIMDDNLVRAVVVRVNSPGGSALASDSIRRELQRLKTLGKTVVVSMGDVA 498 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 A Y I+ A+N +VA ++ G IG K+VK++P+K Sbjct: 499 AGGAYYIASAANAVVAQPGTVTGGIGA---------------AENKTVKAAPLK------ 537 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +++V V++SR + L+ GR++TG +A +GL+D + Sbjct: 538 --------HVQEELVGQ--------VAKSRGRAMWEMQQLAHGRVYTGRQAYDIGLVDQL 581 Query: 228 GGQEEVWQSLYAL 240 GG EE AL Sbjct: 582 GGLEEAISHAKAL 594 >gi|313116931|ref|YP_004038055.1| ClpP class periplasmic serine protease [Halogeometricum borinquense DSM 11551] gi|312294883|gb|ADQ68919.1| ClpP class periplasmic serine protease [Halogeometricum borinquense DSM 11551] Length = 304 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 18/202 (8%) Query: 38 VARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 VA + + G I + + E+I+ + ++DS A+++ ++SPGG+A A E ++ A+++ + Sbjct: 42 VAVVEMHGTITGDSATEVIDNLREARQNDSIRAVVLDINSPGGAASASEQLYLAVKRTQQ 101 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV+ V MAAS GY ++ ++ + S VGS+GV P + + Sbjct: 102 EMPVVVSVTGMAASGGYYMTAPADEVYVTPASTVGSVGVRAVVPGSQ-------APSGEI 154 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWT 214 + P K S +EV + V++ FV V E R+ T LS ++++ Sbjct: 155 LTGPDKGSTSTNAEVRRR--------VEALRRAFVGSVMEERSESLKLTEEELSYAKVYS 206 Query: 215 GAEAKKVGLIDVVGGQEEVWQS 236 GA K+GL D +GG + Q Sbjct: 207 GARGVKLGLADSIGGIDTAIQG 228 >gi|254497745|ref|ZP_05110518.1| putative periplasmic protease [Legionella drancourtii LLAP12] gi|254353038|gb|EET11800.1| putative periplasmic protease [Legionella drancourtii LLAP12] Length = 282 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 97/190 (51%), Gaps = 10/190 (5%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q+++++ P+ + ++AAS GYL++C +N I+AA + Sbjct: 82 VLVRLDSPGGIVNSYGLAASQLQRIRDKNIPLTVSIDKIAASGGYLMACVANRIIAAPFA 141 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + +L K V I+ + + K + E K + Q+ ++ + Sbjct: 142 IIGSIGVVAQIPNLHRWLKKHDVDIELLTAGEYKRTLTLLGENTEKGRKKFQEDLEKIHT 201 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F ++ +R+ + DK ++ G W +A ++ L+D + +E Y L + Sbjct: 202 AFRNYIATNRDQLDMDK---IATGEHWLAKDALELNLVDKLSTSDE-----YLLDKVSTY 253 Query: 247 RKIKDWNPPK 256 + K PPK Sbjct: 254 KAFKLTIPPK 263 >gi|126352250|tpe|CAJ29275.1| TPA: exfoliative toxin [Staphylococcus intermedius] Length = 120 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 63/120 (52%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + +AAS GY IS ++ I A SL GSIGV+ + LD LG+ ++KS K Sbjct: 1 MENLAASGGYYISAPADKIYAGPQSLTGSIGVISESKDYSELLDNLGIKTNTIKSGAHKD 60 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S ++ + +++Q + S+ FV +V E R + K L+DGRI++ +AK G Sbjct: 61 ILSSSRKMTDEEREILQSINKDSFDQFVNVVKEGRQMSESKVRELADGRIYSAQQAKSNG 120 >gi|320540529|ref|ZP_08040179.1| putative predicted inner membrane peptidase [Serratia symbiotica str. Tucson] gi|320029460|gb|EFW11489.1| putative predicted inner membrane peptidase [Serratia symbiotica str. Tucson] Length = 348 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 8/211 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAG 83 S +E P + + +G + D+ E+ E IS + +++ L SPGG + Sbjct: 92 SGTIEVTQPCLYVLDFKGSM-DAHEVTSLREEISAVLAVASTQDEVLLRLESPGGVVHGY 150 Query: 84 EAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +++++ +T V +AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 151 GLAASQLERLRKGGIRLTVAVDNVAASGGYMMACVADRIVAAPFAVIGSIGVVAQIPNFH 210 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + ++ + K + F E + + + ++ ++ F + V + R P Sbjct: 211 RLLKKNDIDVELYTAGQFKRTLTLFGENTEQGREKFRSDLNKTHELFKQFVHQQR--PSL 268 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +S G W G +AK+ GLID +G +++ Sbjct: 269 DIGSVSTGEHWFGTQAKEKGLIDAIGTSDDL 299 >gi|284921153|emb|CBG34219.1| probable protease [Escherichia coli 042] Length = 349 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|254282105|ref|ZP_04957073.1| putative protease SohB [gamma proteobacterium NOR51-B] gi|219678308|gb|EED34657.1| putative protease SohB [gamma proteobacterium NOR51-B] Length = 347 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 5/169 (2%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG ++ G A + + V P+ V ++AAS GY+++C ++ I+AA + Sbjct: 134 VLVRLESPGGMVHSYGLAASQLRRVVDAEIPLTVAVDKVAASGGYMMACVADKIIAAPFA 193 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + + K + F E K Q + ++ ++ Sbjct: 194 VIGSIGVIAQLPNFHKVLKKNDIDFELLTAGEYKRTLTMFGENTDKGRQKFLEELEDTHA 253 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 F + V+E+R + ++ ++ G +W G A V L+D + +E Q Sbjct: 254 LFKQFVAENRKQVAIEQ---VATGEVWFGQRALDVQLVDQLCTSDEYLQ 299 >gi|215486567|ref|YP_002328998.1| putative periplasmic protease [Escherichia coli O127:H6 str. E2348/69] gi|312966800|ref|ZP_07781018.1| peptidase family S49 family protein [Escherichia coli 2362-75] gi|215264639|emb|CAS09010.1| predicted inner membrane peptidase [Escherichia coli O127:H6 str. E2348/69] gi|312288264|gb|EFR16166.1| peptidase family S49 family protein [Escherichia coli 2362-75] gi|320195715|gb|EFW70340.1| putative protease sohB [Escherichia coli WV_060327] gi|323964610|gb|EGB60083.1| peptidase S49 [Escherichia coli M863] gi|323977096|gb|EGB72183.1| peptidase S49 [Escherichia coli TW10509] gi|327253963|gb|EGE65592.1| peptidase family S49 family protein [Escherichia coli STEC_7v] Length = 349 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|209964969|ref|YP_002297884.1| proteinase SohB, putative [Rhodospirillum centenum SW] gi|209958435|gb|ACI99071.1| proteinase SohB, putative [Rhodospirillum centenum SW] Length = 291 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 17/187 (9%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASN 119 +D A ALI++ SPGGS I I+ + K PVI V ++AAS GY ++CA++ Sbjct: 56 KDQVAVALIIN--SPGGSPVQSALIGGRIRALAEEKKLPVIAFVEDVAASGGYWLACAAD 113 Query: 120 IIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 IVA +S+VGSIGV+ F +P L +LG+ + S K PF + V+ Sbjct: 114 EIVADPSSVVGSIGVVSRGFGFPEA---LRRLGIERRVHTSGTNKNMLDPFQPERAEDVE 170 Query: 177 ----MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++V +S W R +P L G WTG +GL+D +G Sbjct: 171 RLKSLQEEVHESFKDWVRRRRGPKLTVPEAD---LFTGEFWTGTRGLTLGLVDRLGDART 227 Query: 233 VWQSLYA 239 V + Y Sbjct: 228 VLRERYG 234 >gi|26247601|ref|NP_753641.1| putative periplasmic protease [Escherichia coli CFT073] gi|227886299|ref|ZP_04004104.1| S49 family SohB endopeptidase [Escherichia coli 83972] gi|300982409|ref|ZP_07176106.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|301046935|ref|ZP_07194049.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|331646595|ref|ZP_08347698.1| putative protease SohB [Escherichia coli M605] gi|331657319|ref|ZP_08358281.1| putative protease SohB [Escherichia coli TA206] gi|26108003|gb|AAN80203.1|AE016760_62 Possible protease sohB [Escherichia coli CFT073] gi|227836503|gb|EEJ46969.1| S49 family SohB endopeptidase [Escherichia coli 83972] gi|281178462|dbj|BAI54792.1| putative protease [Escherichia coli SE15] gi|300301161|gb|EFJ57546.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|300408747|gb|EFJ92285.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|307553330|gb|ADN46105.1| possible protease sohB [Escherichia coli ABU 83972] gi|315294752|gb|EFU54095.1| putative signal peptide peptidase SppA [Escherichia coli MS 153-1] gi|330911137|gb|EGH39647.1| putative protease sohB [Escherichia coli AA86] gi|331045347|gb|EGI17474.1| putative protease SohB [Escherichia coli M605] gi|331055567|gb|EGI27576.1| putative protease SohB [Escherichia coli TA206] Length = 349 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|320659187|gb|EFX26776.1| putative inner membrane peptidase [Escherichia coli O55:H7 str. USDA 5905] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|331682759|ref|ZP_08383378.1| putative protease SohB [Escherichia coli H299] gi|331080390|gb|EGI51569.1| putative protease SohB [Escherichia coli H299] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLNIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|157160777|ref|YP_001458095.1| putative periplasmic protease [Escherichia coli HS] gi|170020364|ref|YP_001725318.1| putative periplasmic protease [Escherichia coli ATCC 8739] gi|188492727|ref|ZP_02999997.1| peptidase, S49 (protease IV) family [Escherichia coli 53638] gi|312971461|ref|ZP_07785636.1| peptidase family S49 family protein [Escherichia coli 1827-70] gi|157066457|gb|ABV05712.1| peptidase, S49 (protease IV) family [Escherichia coli HS] gi|169755292|gb|ACA77991.1| Peptidase S49 domain protein [Escherichia coli ATCC 8739] gi|188487926|gb|EDU63029.1| peptidase, S49 (protease IV) family [Escherichia coli 53638] gi|310336058|gb|EFQ01258.1| peptidase family S49 family protein [Escherichia coli 1827-70] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|218704795|ref|YP_002412314.1| putative periplasmic protease [Escherichia coli UMN026] gi|293404813|ref|ZP_06648805.1| periplasmic protease [Escherichia coli FVEC1412] gi|298380454|ref|ZP_06990053.1| protease sohB [Escherichia coli FVEC1302] gi|300897325|ref|ZP_07115756.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|331662684|ref|ZP_08363607.1| putative protease SohB [Escherichia coli TA143] gi|218431892|emb|CAR12777.1| putative inner membrane peptidase [Escherichia coli UMN026] gi|291427021|gb|EFF00048.1| periplasmic protease [Escherichia coli FVEC1412] gi|298277896|gb|EFI19410.1| protease sohB [Escherichia coli FVEC1302] gi|300358904|gb|EFJ74774.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|331061106|gb|EGI33070.1| putative protease SohB [Escherichia coli TA143] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLNIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|323187503|gb|EFZ72812.1| peptidase family S49 family protein [Escherichia coli RN587/1] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|113460984|ref|YP_719051.1| putative periplasmic protease [Haemophilus somnus 129PT] gi|112823027|gb|ABI25116.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Haemophilus somnus 129PT] Length = 347 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 105/210 (50%), Gaps = 12/210 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E PH+ + +G I S+ E I I ++++D +++ L SPGG + Sbjct: 95 EKRKPHLFVLHFKGDISASETTALREEISAIIAVAKEDDE--VLLRLESPGGVVHGYGLA 152 Query: 87 FRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K R +T V ++AAS GY+++C ++ I++A +++GSIGV+ Q P + L Sbjct: 153 ASQLARLKQRNIKLTVAVDKVAASGGYMMACVADKIISAPFAIIGSIGVVAQIPNIHRLL 212 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKT 204 K + + + + K + E K Q ++ ++ F + V+++R ++ DK Sbjct: 213 KKHDIDVDVMTAGEYKRTMTILGENTEKGKAKFQQDLEDTHLLFKQFVTQNRPHLDIDK- 271 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A + L+D + +++ Sbjct: 272 --IATGEHWFGKQALALHLVDEIATSDDLL 299 >gi|332091664|gb|EGI96744.1| peptidase family S49 family protein [Shigella boydii 5216-82] Length = 346 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 5/171 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 134 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 193 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 194 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 253 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R ++ D+ ++ G W G +A + GL+D + +EV SL Sbjct: 254 LFKDFVKRMRPSLDIDQ---VATGEHWYGQQAVEKGLVDEINTSDEVILSL 301 >gi|313668036|ref|YP_004048320.1| secreted protease [Neisseria lactamica ST-640] gi|313005498|emb|CBN86934.1| putative secreted protease [Neisseria lactamica 020-06] Length = 350 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 294 >gi|300904131|ref|ZP_07122004.1| putative signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|301304778|ref|ZP_07210884.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|300403896|gb|EFJ87434.1| putative signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|300839899|gb|EFK67659.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|315252503|gb|EFU32471.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|301019499|ref|ZP_07183668.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] gi|300399240|gb|EFJ82778.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLNIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|319638866|ref|ZP_07993624.1| protease [Neisseria mucosa C102] gi|317399770|gb|EFV80433.1| protease [Neisseria mucosa C102] Length = 331 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 19/242 (7%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSAT 67 + LSL+ ++ V+ S H A I + G+I + Q L + +E + +A Sbjct: 58 IFLSLIFGLAEEEGKTTSVQARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNAK 117 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 118 AIIIRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYAD 177 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 178 PSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWESMLGD 237 Query: 185 SYHWFVRLVSESRNIPY-DKTL--VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R DK V S GRI+TG EAK+VGLID G S+Y++ Sbjct: 238 IHQEFIKAVKLGRGARLKDKQYPDVFS-GRIYTGKEAKQVGLIDDFG-------SIYSVA 289 Query: 242 VD 243 D Sbjct: 290 RD 291 >gi|333004586|gb|EGK24110.1| peptidase family S49 family protein [Shigella flexneri VA-6] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|300935368|ref|ZP_07150367.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300459398|gb|EFK22891.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] Length = 349 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|309793256|ref|ZP_07687683.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308122843|gb|EFO60105.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 354 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 142 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 201 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 202 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 261 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 262 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 309 >gi|15801907|ref|NP_287927.1| putative periplasmic protease [Escherichia coli O157:H7 EDL933] gi|15831098|ref|NP_309871.1| periplasmic protease [Escherichia coli O157:H7 str. Sakai] gi|168751161|ref|ZP_02776183.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4113] gi|168758357|ref|ZP_02783364.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4401] gi|168763580|ref|ZP_02788587.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4501] gi|168771271|ref|ZP_02796278.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4486] gi|168775081|ref|ZP_02800088.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4196] gi|168783775|ref|ZP_02808782.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4076] gi|168790072|ref|ZP_02815079.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC869] gi|168801619|ref|ZP_02826626.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC508] gi|195939206|ref|ZP_03084588.1| putative periplasmic protease [Escherichia coli O157:H7 str. EC4024] gi|208811051|ref|ZP_03252884.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4206] gi|208815761|ref|ZP_03256940.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4045] gi|208819606|ref|ZP_03259926.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4042] gi|209397450|ref|YP_002270326.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4115] gi|217329117|ref|ZP_03445197.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. TW14588] gi|254792860|ref|YP_003077697.1| putative periplasmic protease [Escherichia coli O157:H7 str. TW14359] gi|261224254|ref|ZP_05938535.1| predicted inner membrane peptidase [Escherichia coli O157:H7 str. FRIK2000] gi|261257490|ref|ZP_05950023.1| predicted inner membrane peptidase [Escherichia coli O157:H7 str. FRIK966] gi|291282359|ref|YP_003499177.1| Peptidase, S49 (Protease IV) family [Escherichia coli O55:H7 str. CB9615] gi|331652312|ref|ZP_08353331.1| putative protease SohB [Escherichia coli M718] gi|12515525|gb|AAG56543.1|AE005380_2 putative protease [Escherichia coli O157:H7 str. EDL933] gi|13361309|dbj|BAB35267.1| putative protease [Escherichia coli O157:H7 str. Sakai] gi|187769295|gb|EDU33139.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4196] gi|188014793|gb|EDU52915.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4113] gi|188998931|gb|EDU67917.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4076] gi|189354830|gb|EDU73249.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4401] gi|189359971|gb|EDU78390.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4486] gi|189366260|gb|EDU84676.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4501] gi|189370448|gb|EDU88864.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC869] gi|189376289|gb|EDU94705.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC508] gi|208724557|gb|EDZ74265.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4206] gi|208732409|gb|EDZ81097.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4045] gi|208739729|gb|EDZ87411.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4042] gi|209158850|gb|ACI36283.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4115] gi|209771988|gb|ACI84306.1| putative protease [Escherichia coli] gi|209771990|gb|ACI84307.1| putative protease [Escherichia coli] gi|209771992|gb|ACI84308.1| putative protease [Escherichia coli] gi|209771994|gb|ACI84309.1| putative protease [Escherichia coli] gi|209771996|gb|ACI84310.1| putative protease [Escherichia coli] gi|217317556|gb|EEC25984.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. TW14588] gi|254592260|gb|ACT71621.1| predicted inner membrane peptidase [Escherichia coli O157:H7 str. TW14359] gi|290762232|gb|ADD56193.1| Peptidase, S49 (Protease IV) family [Escherichia coli O55:H7 str. CB9615] gi|320189977|gb|EFW64629.1| putative protease sohB [Escherichia coli O157:H7 str. EC1212] gi|320637166|gb|EFX06992.1| putative inner membrane peptidase [Escherichia coli O157:H7 str. G5101] gi|320642532|gb|EFX11780.1| putative inner membrane peptidase [Escherichia coli O157:H- str. 493-89] gi|320647885|gb|EFX16593.1| putative inner membrane peptidase [Escherichia coli O157:H- str. H 2687] gi|320653487|gb|EFX21592.1| putative inner membrane peptidase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663980|gb|EFX31167.1| putative inner membrane peptidase [Escherichia coli O157:H7 str. LSU-61] gi|326341068|gb|EGD64861.1| putative protease sohB [Escherichia coli O157:H7 str. 1125] gi|326343309|gb|EGD67076.1| putative protease sohB [Escherichia coli O157:H7 str. 1044] gi|331050590|gb|EGI22648.1| putative protease SohB [Escherichia coli M718] Length = 349 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|16129233|ref|NP_415788.1| predicted inner membrane peptidase; multicopy suppressor of htrA(degP) [Escherichia coli str. K-12 substr. MG1655] gi|24112669|ref|NP_707179.1| putative periplasmic protease [Shigella flexneri 2a str. 301] gi|30062794|ref|NP_836965.1| putative periplasmic protease [Shigella flexneri 2a str. 2457T] gi|74312359|ref|YP_310778.1| putative periplasmic protease [Shigella sonnei Ss046] gi|89108118|ref|AP_001898.1| predicted inner membrane peptidase [Escherichia coli str. K-12 substr. W3110] gi|170080949|ref|YP_001730269.1| inner membrane peptidase [Escherichia coli str. K-12 substr. DH10B] gi|170682481|ref|YP_001743913.1| putative periplasmic protease [Escherichia coli SMS-3-5] gi|191166672|ref|ZP_03028500.1| peptidase, S49 (protease IV) family [Escherichia coli B7A] gi|193062652|ref|ZP_03043746.1| peptidase, S49 (protease IV) family [Escherichia coli E22] gi|193069952|ref|ZP_03050900.1| peptidase, S49 (protease IV) family [Escherichia coli E110019] gi|194426078|ref|ZP_03058634.1| peptidase, S49 (protease IV) family [Escherichia coli B171] gi|194436931|ref|ZP_03069030.1| peptidase, S49 (protease IV) family [Escherichia coli 101-1] gi|209918511|ref|YP_002292595.1| putative periplasmic protease [Escherichia coli SE11] gi|218553824|ref|YP_002386737.1| putative periplasmic protease [Escherichia coli IAI1] gi|218694843|ref|YP_002402510.1| putative periplasmic protease [Escherichia coli 55989] gi|238900505|ref|YP_002926301.1| putative inner membrane peptidase [Escherichia coli BW2952] gi|253773731|ref|YP_003036562.1| periplasmic protease [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161352|ref|YP_003044460.1| putative periplasmic protease [Escherichia coli B str. REL606] gi|256023020|ref|ZP_05436885.1| putative periplasmic protease [Escherichia sp. 4_1_40B] gi|260843619|ref|YP_003221397.1| putative inner membrane peptidase [Escherichia coli O103:H2 str. 12009] gi|260854969|ref|YP_003228860.1| putative inner membrane peptidase [Escherichia coli O26:H11 str. 11368] gi|260867720|ref|YP_003234122.1| putative inner membrane peptidase [Escherichia coli O111:H- str. 11128] gi|293414604|ref|ZP_06657253.1| protease sohB [Escherichia coli B185] gi|293433631|ref|ZP_06662059.1| protease sohB [Escherichia coli B088] gi|300820143|ref|ZP_07100312.1| putative signal peptide peptidase SppA [Escherichia coli MS 107-1] gi|300822566|ref|ZP_07102705.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|300919452|ref|ZP_07135953.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300927778|ref|ZP_07143342.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300951917|ref|ZP_07165721.1| putative signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|300955862|ref|ZP_07168201.1| putative signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|301022792|ref|ZP_07186634.1| putative signal peptide peptidase SppA [Escherichia coli MS 196-1] gi|301647234|ref|ZP_07247053.1| putative signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|307137909|ref|ZP_07497265.1| putative periplasmic protease [Escherichia coli H736] gi|307309975|ref|ZP_07589625.1| Peptidase S49 domain protein [Escherichia coli W] gi|331641830|ref|ZP_08342965.1| putative protease SohB [Escherichia coli H736] gi|331667656|ref|ZP_08368520.1| putative protease SohB [Escherichia coli TA271] gi|331672799|ref|ZP_08373585.1| putative protease SohB [Escherichia coli TA280] gi|331677049|ref|ZP_08377745.1| putative protease SohB [Escherichia coli H591] gi|84028736|sp|P0AG14|SOHB_ECOLI RecName: Full=Probable protease sohB gi|84028737|sp|P0AG15|SOHB_SHIFL RecName: Full=Probable protease sohB gi|1742067|dbj|BAA14809.1| predicted inner membrane peptidase [Escherichia coli str. K12 substr. W3110] gi|1787527|gb|AAC74354.1| predicted inner membrane peptidase; multicopy suppressor of htrA(degP) [Escherichia coli str. K-12 substr. MG1655] gi|24051584|gb|AAN42886.1| putative protease [Shigella flexneri 2a str. 301] gi|30041042|gb|AAP16772.1| putative protease [Shigella flexneri 2a str. 2457T] gi|73855836|gb|AAZ88543.1| putative protease [Shigella sonnei Ss046] gi|169888784|gb|ACB02491.1| predicted inner membrane peptidase [Escherichia coli str. K-12 substr. DH10B] gi|170520199|gb|ACB18377.1| peptidase, S49 (protease IV) family [Escherichia coli SMS-3-5] gi|190903321|gb|EDV63042.1| peptidase, S49 (protease IV) family [Escherichia coli B7A] gi|192931774|gb|EDV84374.1| peptidase, S49 (protease IV) family [Escherichia coli E22] gi|192956705|gb|EDV87160.1| peptidase, S49 (protease IV) family [Escherichia coli E110019] gi|194416133|gb|EDX32399.1| peptidase, S49 (protease IV) family [Escherichia coli B171] gi|194423914|gb|EDX39902.1| peptidase, S49 (protease IV) family [Escherichia coli 101-1] gi|209911770|dbj|BAG76844.1| putative protease [Escherichia coli SE11] gi|218351575|emb|CAU97287.1| putative inner membrane peptidase [Escherichia coli 55989] gi|218360592|emb|CAQ98150.1| putative inner membrane peptidase [Escherichia coli IAI1] gi|238862494|gb|ACR64492.1| predicted inner membrane peptidase [Escherichia coli BW2952] gi|253324775|gb|ACT29377.1| Peptidase S49 domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973253|gb|ACT38924.1| predicted inner membrane peptidase [Escherichia coli B str. REL606] gi|253977467|gb|ACT43137.1| predicted inner membrane peptidase [Escherichia coli BL21(DE3)] gi|257753618|dbj|BAI25120.1| predicted inner membrane peptidase [Escherichia coli O26:H11 str. 11368] gi|257758766|dbj|BAI30263.1| predicted inner membrane peptidase [Escherichia coli O103:H2 str. 12009] gi|257764076|dbj|BAI35571.1| predicted inner membrane peptidase [Escherichia coli O111:H- str. 11128] gi|260449598|gb|ACX40020.1| Peptidase S49 domain protein [Escherichia coli DH1] gi|281600693|gb|ADA73677.1| putative protease sohB [Shigella flexneri 2002017] gi|291324450|gb|EFE63872.1| protease sohB [Escherichia coli B088] gi|291434662|gb|EFF07635.1| protease sohB [Escherichia coli B185] gi|299881093|gb|EFI89304.1| putative signal peptide peptidase SppA [Escherichia coli MS 196-1] gi|300317264|gb|EFJ67048.1| putative signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|300413474|gb|EFJ96784.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300448861|gb|EFK12481.1| putative signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|300464171|gb|EFK27664.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300524982|gb|EFK46051.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|300527298|gb|EFK48360.1| putative signal peptide peptidase SppA [Escherichia coli MS 107-1] gi|301074596|gb|EFK89402.1| putative signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|306909693|gb|EFN40187.1| Peptidase S49 domain protein [Escherichia coli W] gi|309701570|emb|CBJ00877.1| probable protease [Escherichia coli ETEC H10407] gi|313649460|gb|EFS13891.1| peptidase family S49 family protein [Shigella flexneri 2a str. 2457T] gi|313848613|emb|CAQ31775.2| predicted inner membrane peptidase [Escherichia coli BL21(DE3)] gi|315060522|gb|ADT74849.1| predicted inner membrane peptidase [Escherichia coli W] gi|315135908|dbj|BAJ43067.1| putative periplasmic protease [Escherichia coli DH1] gi|315619350|gb|EFU99894.1| peptidase family S49 family protein [Escherichia coli 3431] gi|320199306|gb|EFW73897.1| putative protease sohB [Escherichia coli EC4100B] gi|323153297|gb|EFZ39555.1| peptidase family S49 family protein [Escherichia coli EPECa14] gi|323162368|gb|EFZ48223.1| peptidase family S49 family protein [Escherichia coli E128010] gi|323168246|gb|EFZ53931.1| peptidase family S49 family protein [Shigella sonnei 53G] gi|323172373|gb|EFZ58010.1| peptidase family S49 family protein [Escherichia coli LT-68] gi|323179777|gb|EFZ65338.1| peptidase family S49 family protein [Escherichia coli 1180] gi|323185570|gb|EFZ70931.1| peptidase family S49 family protein [Escherichia coli 1357] gi|323378915|gb|ADX51183.1| Peptidase S49 domain protein [Escherichia coli KO11] gi|323937593|gb|EGB33861.1| peptidase S49 [Escherichia coli E1520] gi|323942386|gb|EGB38556.1| peptidase S49 [Escherichia coli E482] gi|323947448|gb|EGB43452.1| peptidase S49 [Escherichia coli H120] gi|323962572|gb|EGB58152.1| peptidase S49 [Escherichia coli H489] gi|323973488|gb|EGB68674.1| peptidase S49 [Escherichia coli TA007] gi|324018879|gb|EGB88098.1| putative signal peptide peptidase SppA [Escherichia coli MS 117-3] gi|331038628|gb|EGI10848.1| putative protease SohB [Escherichia coli H736] gi|331065241|gb|EGI37136.1| putative protease SohB [Escherichia coli TA271] gi|331070020|gb|EGI41389.1| putative protease SohB [Escherichia coli TA280] gi|331075738|gb|EGI47036.1| putative protease SohB [Escherichia coli H591] gi|332342864|gb|AEE56198.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332757924|gb|EGJ88251.1| peptidase family S49 family protein [Shigella flexneri 4343-70] gi|332759393|gb|EGJ89701.1| peptidase family S49 family protein [Shigella flexneri 2747-71] gi|332760366|gb|EGJ90656.1| peptidase family S49 family protein [Shigella flexneri K-671] gi|333005723|gb|EGK25241.1| peptidase family S49 family protein [Shigella flexneri K-218] gi|333007608|gb|EGK27086.1| peptidase family S49 family protein [Shigella flexneri K-272] gi|333019108|gb|EGK38398.1| peptidase family S49 family protein [Shigella flexneri K-304] gi|333019542|gb|EGK38822.1| peptidase family S49 family protein [Shigella flexneri K-227] Length = 349 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|194435042|ref|ZP_03067281.1| peptidase, S49 (protease IV) family [Shigella dysenteriae 1012] gi|194416699|gb|EDX32829.1| peptidase, S49 (protease IV) family [Shigella dysenteriae 1012] gi|320181714|gb|EFW56625.1| putative protease sohB [Shigella boydii ATCC 9905] gi|332098384|gb|EGJ03357.1| peptidase family S49 family protein [Shigella dysenteriae 155-74] Length = 349 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 5/171 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R ++ D+ ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMRPSLDIDQ---VATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|332767506|gb|EGJ97700.1| peptidase S49 family protein [Shigella flexneri 2930-71] Length = 339 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 127 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 187 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 246 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 247 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 294 >gi|309378531|emb|CBX22884.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 350 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 294 >gi|82776631|ref|YP_402980.1| putative periplasmic protease [Shigella dysenteriae Sd197] gi|309789066|ref|ZP_07683661.1| peptidase family S49 family protein [Shigella dysenteriae 1617] gi|81240779|gb|ABB61489.1| putative protease [Shigella dysenteriae Sd197] gi|308923337|gb|EFP68849.1| peptidase family S49 family protein [Shigella dysenteriae 1617] Length = 346 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 134 VVLRLESPGGMVHGYGLASSQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 193 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 194 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 253 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 254 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 301 >gi|110805274|ref|YP_688794.1| putative periplasmic protease [Shigella flexneri 5 str. 8401] gi|110614822|gb|ABF03489.1| putative protease [Shigella flexneri 5 str. 8401] Length = 296 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 84 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 143 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 144 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 203 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 204 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 251 >gi|293409659|ref|ZP_06653235.1| protease sohB [Escherichia coli B354] gi|291470127|gb|EFF12611.1| protease sohB [Escherichia coli B354] Length = 349 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|307609646|emb|CBW99151.1| hypothetical protein LPW_09361 [Legionella pneumophila 130b] Length = 197 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 87/162 (53%), Gaps = 5/162 (3%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG+ +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GS Sbjct: 1 MESPGGAVNGYGLAASQLQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGS 60 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ Q P +L K + ++ + + K + F+E K + Q+ ++ + F Sbjct: 61 IGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFRE 120 Query: 192 LVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 V ++R+ + DK ++ G W +A + L+D + +E Sbjct: 121 YVLKNRSQLDIDK---VATGEHWIAKDAFDLRLVDKLATSDE 159 >gi|253989551|ref|YP_003040907.1| periplasmic protease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781001|emb|CAQ84163.1| putative Peptidase S49 [Photorhabdus asymbiotica] Length = 348 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 3/166 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIV 122 D+ +++ L SPGG + + +++ + +T V ++AAS GY+++C ++ I+ Sbjct: 131 DAKDEVLLRLESPGGMVHGYGLAASQLARLRQKGIRLTVAVDKVAASGGYMMACVADRII 190 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA +++GSIGV+ Q P + L K + ++ + K + E + + Q+ + Sbjct: 191 AAPFAIIGSIGVVAQIPNIHKLLKKNDIDVELHTAGEYKRTLTFLGENTEQGRKKFQEDL 250 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ F + R P ++ G W G +AK+ GLID VG Sbjct: 251 NQTHQLFKEFIHIHR--PLLDVENVATGEYWYGTQAKEKGLIDEVG 294 >gi|261400985|ref|ZP_05987110.1| peptidase, S49 family [Neisseria lactamica ATCC 23970] gi|269209100|gb|EEZ75555.1| peptidase, S49 family [Neisseria lactamica ATCC 23970] Length = 350 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 294 >gi|3249702|gb|AAC24140.1| unknown [Enterobacteria phage Felix 01] Length = 442 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 96/175 (54%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D+S +++ + S GG A + R I + +K +I V E A SA Y ++ ++ I+ Sbjct: 102 DESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVDEFACSAAYALASSAEEII 161 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A+ + VGSIGV+ + + +K GV+I +K+ K SPF ++ ++ + +Q + Sbjct: 162 ASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMGSPFQALSEESKERLQKRI 221 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +Y F V+ESRN+ ++ + ++ +++ EA ++GLI+ + Q++ L Sbjct: 222 NDTYATFTGFVAESRNLS-EEAVKNTEANVYSAQEALELGLINSIMSQDDFLNYL 275 >gi|238763116|ref|ZP_04624082.1| protease sohB [Yersinia kristensenii ATCC 33638] gi|238698615|gb|EEP91366.1| protease sohB [Yersinia kristensenii ATCC 33638] Length = 230 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 18 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 77 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 78 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 137 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F + V + R P ++ G W G +AK+ GL+D +G Sbjct: 138 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIG 176 >gi|308389720|gb|ADO32040.1| putative secreted protease [Neisseria meningitidis alpha710] gi|325132727|gb|EGC55410.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M6190] Length = 366 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 155 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 214 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 215 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 274 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 275 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 310 >gi|254670000|emb|CBA04724.1| putative secreted protease [Neisseria meningitidis alpha153] Length = 366 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 155 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 214 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 215 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 274 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 275 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 310 >gi|293395939|ref|ZP_06640220.1| S49 family peptidase [Serratia odorifera DSM 4582] gi|291421437|gb|EFE94685.1| S49 family peptidase [Serratia odorifera DSM 4582] Length = 348 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRKGGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGQFKRTLTLFGENTEQGRDKFREDLNETHE 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GLID VG +++ Sbjct: 256 LFKQFVHQQR--PSLDIDSVATGEHWFGTQAKEKGLIDAVGTSDDL 299 >gi|238790408|ref|ZP_04634179.1| protease sohB [Yersinia frederiksenii ATCC 33641] gi|238721515|gb|EEQ13184.1| protease sohB [Yersinia frederiksenii ATCC 33641] Length = 335 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 123 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 182 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 183 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 242 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 243 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 286 >gi|153213542|ref|ZP_01948832.1| sohB protein, peptidase U7 family [Vibrio cholerae 1587] gi|124115878|gb|EAY34698.1| sohB protein, peptidase U7 family [Vibrio cholerae 1587] Length = 356 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + +G I D++E+ E +S + +++ L + GG + Sbjct: 106 RDPHLFVLDFQGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 164 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 165 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 224 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 225 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 281 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 282 ATGEHWFGTQAKALGLVDEI 301 >gi|240016949|ref|ZP_04723489.1| putative periplasmic protease [Neisseria gonorrhoeae FA6140] gi|240117127|ref|ZP_04731189.1| putative periplasmic protease [Neisseria gonorrhoeae PID1] gi|268602813|ref|ZP_06136980.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268586944|gb|EEZ51620.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] Length = 350 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLIRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 294 >gi|46402091|ref|YP_006585.1| putative head maturation protease [Klebsiella phage phiKO2] gi|40218235|gb|AAR83021.1| putative head maturation protease [Klebsiella phage phiKO2] Length = 306 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 10/197 (5%) Query: 37 HVARIAIRGQIEDSQELIERIERIS-------RDDSATALIVSLSSPGGSAYAGEAIFRA 89 H +A RGQI + + ERI D S + +++ ++S GG+A + + Sbjct: 74 HGLLVARRGQITQACTELTSYERIRSQLTAALNDPSISEIVLDINSGGGAAVGCKELADY 133 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I + + KP+ V+ A SA Y I+ A + I+ ++TS VGSIGV+ ++ +K+G Sbjct: 134 IYQSRETKPITAIVNYNAFSAAYFIASACSKIIVSQTSGVGSIGVIMEHLDTSKLEEKMG 193 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-S 208 ++ ++ K + ++ +A M Q ++D Y F V+E R + D+ +V+ + Sbjct: 194 LTFTTIFRGDNKNNGTQHEPLSEEAQAMFQGMIDEMYETFTGSVAEYRGL--DRQVVVDT 251 Query: 209 DGRIWTGAEAKKVGLID 225 ++ G A GL D Sbjct: 252 QAGLYFGPGAVSAGLAD 268 >gi|121635245|ref|YP_975490.1| putative periplasmic protease [Neisseria meningitidis FAM18] gi|218768556|ref|YP_002343068.1| putative periplasmic protease [Neisseria meningitidis Z2491] gi|120866951|emb|CAM10711.1| putative secreted protease [Neisseria meningitidis FAM18] gi|121052564|emb|CAM08904.1| putative secreted protease [Neisseria meningitidis Z2491] gi|325130673|gb|EGC53414.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis OX99.30304] gi|325134610|gb|EGC57250.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M13399] gi|325136747|gb|EGC59347.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M0579] gi|325138613|gb|EGC61172.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis ES14902] gi|325144853|gb|EGC67141.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240013] gi|325201738|gb|ADY97192.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240149] gi|325205678|gb|ADZ01131.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M04-240196] gi|325208518|gb|ADZ03970.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis NZ-05/33] Length = 350 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 294 >gi|330860996|emb|CBX71269.1| putative protease sohB [Yersinia enterocolitica W22703] Length = 305 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 93 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 152 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 153 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 212 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 213 LFKQFVHQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 256 >gi|254805356|ref|YP_003083577.1| putative protease SohB [Neisseria meningitidis alpha14] gi|254668898|emb|CBA07061.1| putative protease SohB [Neisseria meningitidis alpha14] gi|261392171|emb|CAX49681.1| putative peptidase [Neisseria meningitidis 8013] gi|325128615|gb|EGC51484.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis N1568] gi|325204563|gb|ADZ00017.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240355] Length = 350 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 294 >gi|261492956|ref|ZP_05989500.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495996|ref|ZP_05992408.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308346|gb|EEY09637.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311381|gb|EEY12540.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 350 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++R +T V ++AAS GY+++C +N IV+A + Sbjct: 138 VLLKLESPGGVVHGYGLAASQLQRLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFA 197 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ Q P + L K + + + + K + E K Q Q ++ ++ Sbjct: 198 VIGSVGVVAQVPNIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHS 257 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V+ R P ++ G W G +A ++ L+D + +++ Sbjct: 258 LFKQFVARRR--PQLDIEQVATGEHWFGQQAIELNLVDEIATSDDL 301 >gi|260431642|ref|ZP_05785613.1| peptidase, family S49 [Silicibacter lacuscaerulensis ITI-1157] gi|260415470|gb|EEX08729.1| peptidase, family S49 [Silicibacter lacuscaerulensis ITI-1157] Length = 265 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 3/201 (1%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--P 98 +A R + D+ L +E+ R +A+ + ++SPGGS I I+++ + P Sbjct: 25 MAGRASMSDTA-LAPVLEKAFRKGKPSAVALEINSPGGSPVQSSLIGARIRRLADELNVP 83 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V V ++AAS GY ++ +++ I A ++S++GSIGV+ F+ + G+ + + Sbjct: 84 VHAFVEDVAASGGYWLAASADRIWADDSSVLGSIGVISSGFGAHVFIARQGIERRVHTAG 143 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ PF+ P+ V ++ +++ + F+ V R D+T L G +W A Sbjct: 144 QSKSMLDPFAPEKPEDVARLRGLLEDIHQNFIAHVKARRGDRLDETADLFTGEVWLARRA 203 Query: 219 KKVGLIDVVGGQEEVWQSLYA 239 + +GLID + + Q L+ Sbjct: 204 QDLGLIDGIAHLKPKMQELFG 224 >gi|311694689|gb|ADP97562.1| sohB protein, peptidase U7 family [marine bacterium HP15] Length = 353 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++++ +T V ++AAS GY+++C ++ IVA+ + Sbjct: 140 VVIRLESGGGLVHSYGLAAAQLDRIRSKGLRLTACVDKVAASGGYMMACVADRIVASPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL K V + + + K + F E K Q + ++ ++ Sbjct: 200 ILGSIGVVAQLPNFHRFLKKNDVDFEVLTAGEHKRTMTIFGENTDKGRQKFLEDLEDTHG 259 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F VSE R P +++G IW G A +V LID + +E Sbjct: 260 LFKEYVSERR--PDLDIAAVANGDIWFGKRALEVKLIDEIKTSDE 302 >gi|170768111|ref|ZP_02902564.1| peptidase, S49 family [Escherichia albertii TW07627] gi|170122877|gb|EDS91808.1| peptidase, S49 family [Escherichia albertii TW07627] Length = 349 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++K P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGVVHGYGLAASQLQRLRDKKIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKNKDIDIELHTAGQYKRTLTFLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R P ++ G W G +A + GL+D + ++V Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDDV 300 >gi|238801794|ref|YP_002922844.1| putative head maturation protease [Enterobacteria phage WV8] gi|216263007|gb|ACJ71875.1| putative head maturation protease [Enterobacteria phage WV8] Length = 448 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 96/175 (54%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D+S +++ + S GG A + R I + +K +I V E A SA Y ++ ++ I+ Sbjct: 102 DESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVDEFACSAAYALASSAEEII 161 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A+ + VGSIGV+ + + +K GV+I +K+ K SPF ++ ++ + +Q + Sbjct: 162 ASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMGSPFQALSEESKERLQKRI 221 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +Y F V+ESRN+ ++ + ++ +++ EA ++GLI+ + Q++ L Sbjct: 222 NDTYATFTGFVAESRNLS-EEAVKNTEANVYSAQEALELGLINSIMSQDDFLNYL 275 >gi|329297657|ref|ZP_08254993.1| putative inner membrane peptidase [Plautia stali symbiont] Length = 348 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 5/162 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV-HEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ +T V ++AAS GY+++C ++ IVAA S Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRDAGLQLTAVVDKVAASGGYMMACVADRIVAAPFS 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + Q+ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFNRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQEDLNETHQ 255 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F V + R + DK ++ G W G +A +GLID +G Sbjct: 256 LFKDFVHQMRPALDLDK---VATGEHWYGRQALDLGLIDEIG 294 >gi|297250560|ref|ZP_06864551.2| peptidase, S49 family [Neisseria polysaccharea ATCC 43768] gi|296838605|gb|EFH22543.1| peptidase, S49 family [Neisseria polysaccharea ATCC 43768] Length = 366 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 155 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 214 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 215 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 274 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 275 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 310 >gi|15602450|ref|NP_245522.1| putative periplasmic protease [Pasteurella multocida subsp. multocida str. Pm70] gi|12720854|gb|AAK02669.1| SohB [Pasteurella multocida subsp. multocida str. Pm70] Length = 353 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + G A + ++ ++ + V ++AAS GY+++C ++ IVAA + Sbjct: 140 VLVRLESPGGMVHGYGLAASQLLRLKQHGIKLTVAVDKVAASGGYMMACVADTIVAAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ Q P + L K V + + + K + E K Q Q ++ ++ Sbjct: 200 ILGSVGVVAQIPNIHRLLKKHDVDVDVMTAGEYKRTMTVLGENTEKGKQKFQQELEETHQ 259 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + V+++R P ++ G W G +A + L+D + Sbjct: 260 LFKQFVTQNR--PQVNIEEIATGEHWFGQQALGLHLVDAI 297 >gi|238757073|ref|ZP_04618261.1| protease sohB [Yersinia aldovae ATCC 35236] gi|238704903|gb|EEP97432.1| protease sohB [Yersinia aldovae ATCC 35236] Length = 348 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|38707715|ref|NP_944888.1| Putative head maturation protease [Enterobacteria phage Felix 01] gi|33340318|gb|AAQ14669.1|AF320576_99 unknown [Enterobacteria phage Felix 01] gi|269975290|gb|ACZ55514.1| putative head maturation protease [Staphylococcus phage SA1] Length = 448 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 96/175 (54%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D+S +++ + S GG A + R I + +K +I V E A SA Y ++ ++ I+ Sbjct: 102 DESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVDEFACSAAYALASSAEEII 161 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A+ + VGSIGV+ + + +K GV+I +K+ K SPF ++ ++ + +Q + Sbjct: 162 ASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMGSPFQALSEESKERLQKRI 221 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +Y F V+ESRN+ ++ + ++ +++ EA ++GLI+ + Q++ L Sbjct: 222 NDTYATFTGFVAESRNLS-EEAVKNTEANVYSAQEALELGLINSIMSQDDFLNYL 275 >gi|327483771|gb|AEA78178.1| Possible protease sohB [Vibrio cholerae LMA3894-4] Length = 353 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 103 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 161 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 162 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 221 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 222 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 278 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 279 ATGEHWFGTQAKTLGLVDEI 298 >gi|229520509|ref|ZP_04409934.1| SohB protein peptidase U7 family [Vibrio cholerae TM 11079-80] gi|229342607|gb|EEO07600.1| SohB protein peptidase U7 family [Vibrio cholerae TM 11079-80] Length = 356 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 106 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 164 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 165 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 224 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 225 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 281 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 282 ATGEHWFGTQAKALGLVDEI 301 >gi|254672356|emb|CBA05569.1| putative secreted protease [Neisseria meningitidis alpha275] Length = 366 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 155 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 214 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 215 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 274 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 275 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 310 >gi|75676773|ref|YP_319194.1| peptidase S49 [Nitrobacter winogradskyi Nb-255] gi|74421643|gb|ABA05842.1| peptidase S49 [Nitrobacter winogradskyi Nb-255] Length = 292 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 5/169 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNI 120 D A AL+V +SPGGS I+ I+++ K PV+ V ++AAS GY+I+CA + Sbjct: 59 DAKAVALVV--NSPGGSPVQSRQIYLRIRQLSREKEIPVLVFVEDVAASGGYMIACAGDE 116 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I +S++GSIGV+ + K+GV + + KA PF NP V ++ Sbjct: 117 IFCDPSSILGSIGVVGGGFGFTELIRKIGVERRLYTAGEHKATLDPFLPENPDDVARLKA 176 Query: 181 VVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVG 228 + + F+ LV SR +L G W G + +GL D +G Sbjct: 177 IQREIHATFIELVKASRGGRLKGADDLLFTGEYWAGERSVALGLADGIG 225 >gi|238794712|ref|ZP_04638316.1| protease sohB [Yersinia intermedia ATCC 29909] gi|238725943|gb|EEQ17493.1| protease sohB [Yersinia intermedia ATCC 29909] Length = 348 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK GL+D +G +++ Sbjct: 256 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKDKGLVDAIGTSDDL 299 >gi|240948297|ref|ZP_04752683.1| putative periplasmic protease [Actinobacillus minor NM305] gi|240297336|gb|EER47877.1| putative periplasmic protease [Actinobacillus minor NM305] Length = 350 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++K + P+ V ++AAS GY+++C ++ I++A + Sbjct: 139 VLLKLESPGGVVHGYGLAASQLQRLKAKNIPLTVAVDKVAASGGYMMACVADKIISAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + L K + + + + K + E K Q Q ++ ++ Sbjct: 199 VIGSIGVVAQVPNIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHD 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V++ R P ++ G W G +A + L+D + +++ Sbjct: 259 LFKQFVTQHR--PQLDIEKIATGEHWFGQQALALNLVDEIATSDDL 302 >gi|238751909|ref|ZP_04613395.1| protease sohB [Yersinia rohdei ATCC 43380] gi|238709889|gb|EEQ02121.1| protease sohB [Yersinia rohdei ATCC 43380] Length = 348 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHV 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|229358029|ref|YP_943339.2| putative periplasmic protease [Psychromonas ingrahamii 37] Length = 349 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 + V L S GG + +Q++++ K P+ V ++AAS GY+++C +N I+AA + Sbjct: 136 VFVRLESGGGMVHGYGLAASQLQRLRDHKIPLTISVDKVAASGGYMMACVANKIIAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + + K + F E + + ++ ++ Sbjct: 196 ILGSIGVIAQIPNFNKVLKKHDIEFEQLTAGEYKRTLTMFGENDQAGRDKFKQELEETHD 255 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS+ R+ I DK ++ G W G +A + L+D + Sbjct: 256 LFKQFVSQQRSQIDIDK---VATGEHWYGLQAIERNLVDQI 293 >gi|153824949|ref|ZP_01977616.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-2] gi|229529849|ref|ZP_04419239.1| SohB protein peptidase U7 family [Vibrio cholerae 12129(1)] gi|149741461|gb|EDM55491.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-2] gi|229333623|gb|EEN99109.1| SohB protein peptidase U7 family [Vibrio cholerae 12129(1)] Length = 356 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 106 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 164 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 165 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 224 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 225 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 281 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 282 ATGEHWFGTQAKTLGLVDEI 301 >gi|119864263|gb|ABM03740.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Psychromonas ingrahamii 37] Length = 360 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 + V L S GG + +Q++++ K P+ V ++AAS GY+++C +N I+AA + Sbjct: 147 VFVRLESGGGMVHGYGLAASQLQRLRDHKIPLTISVDKVAASGGYMMACVANKIIAAPFA 206 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + + K + F E + + ++ ++ Sbjct: 207 ILGSIGVIAQIPNFNKVLKKHDIEFEQLTAGEYKRTLTMFGENDQAGRDKFKQELEETHD 266 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS+ R+ I DK ++ G W G +A + L+D + Sbjct: 267 LFKQFVSQQRSQIDIDK---VATGEHWYGLQAIERNLVDQI 304 >gi|123442462|ref|YP_001006441.1| putative periplasmic protease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089423|emb|CAL12271.1| peptidase family U7 protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 348 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVHQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|33340432|gb|AAQ14783.1| unknown [Enterobacteria phage Felix 01] Length = 418 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 96/175 (54%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D+S +++ + S GG A + R I + +K +I V E A SA Y ++ ++ I+ Sbjct: 72 DESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVDEFACSAAYALASSAEEII 131 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A+ + VGSIGV+ + + +K GV+I +K+ K SPF ++ ++ + +Q + Sbjct: 132 ASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMGSPFQALSEESKERLQKRI 191 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +Y F V+ESRN+ ++ + ++ +++ EA ++GLI+ + Q++ L Sbjct: 192 NDTYATFTGFVAESRNLS-EEAVKNTEANVYSAQEALELGLINSIMSQDDFLNYL 245 >gi|121587057|ref|ZP_01676834.1| sohB protein, peptidase U7 family [Vibrio cholerae 2740-80] gi|121726239|ref|ZP_01679529.1| sohB protein, peptidase U7 family [Vibrio cholerae V52] gi|153828141|ref|ZP_01980808.1| sohB protein, peptidase U7 family [Vibrio cholerae 623-39] gi|227081233|ref|YP_002809784.1| sohB protein, peptidase U7 family [Vibrio cholerae M66-2] gi|229505345|ref|ZP_04394855.1| SohB protein peptidase U7 family [Vibrio cholerae BX 330286] gi|229510985|ref|ZP_04400464.1| SohB protein peptidase U7 family [Vibrio cholerae B33] gi|229518106|ref|ZP_04407550.1| SohB protein peptidase U7 family [Vibrio cholerae RC9] gi|229608364|ref|YP_002879012.1| periplasmic protease [Vibrio cholerae MJ-1236] gi|254291486|ref|ZP_04962277.1| sohB protein, peptidase U7 family [Vibrio cholerae AM-19226] gi|254848189|ref|ZP_05237539.1| peptidase U7 family protein sohB [Vibrio cholerae MO10] gi|297578664|ref|ZP_06940592.1| sohB protein [Vibrio cholerae RC385] gi|298498832|ref|ZP_07008639.1| peptidase U7 family sohB protein [Vibrio cholerae MAK 757] gi|9655526|gb|AAF94219.1| sohB protein, peptidase U7 family [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548692|gb|EAX58741.1| sohB protein, peptidase U7 family [Vibrio cholerae 2740-80] gi|121631185|gb|EAX63558.1| sohB protein, peptidase U7 family [Vibrio cholerae V52] gi|146316416|gb|ABQ20955.1| sohB protein, peptidase U7 family [Vibrio cholerae O395] gi|148876383|gb|EDL74518.1| sohB protein, peptidase U7 family [Vibrio cholerae 623-39] gi|150422550|gb|EDN14506.1| sohB protein, peptidase U7 family [Vibrio cholerae AM-19226] gi|227009121|gb|ACP05333.1| sohB protein, peptidase U7 family [Vibrio cholerae M66-2] gi|227012876|gb|ACP09086.1| sohB protein, peptidase U7 family [Vibrio cholerae O395] gi|229344821|gb|EEO09795.1| SohB protein peptidase U7 family [Vibrio cholerae RC9] gi|229350950|gb|EEO15891.1| SohB protein peptidase U7 family [Vibrio cholerae B33] gi|229357568|gb|EEO22485.1| SohB protein peptidase U7 family [Vibrio cholerae BX 330286] gi|229371019|gb|ACQ61442.1| SohB protein peptidase U7 family [Vibrio cholerae MJ-1236] gi|254843894|gb|EET22308.1| peptidase U7 family protein sohB [Vibrio cholerae MO10] gi|297536258|gb|EFH75091.1| sohB protein [Vibrio cholerae RC385] gi|297543165|gb|EFH79215.1| peptidase U7 family sohB protein [Vibrio cholerae MAK 757] Length = 356 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 106 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 164 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 165 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 224 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 225 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 281 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 282 ATGEHWFGTQAKALGLVDEI 301 >gi|254496591|ref|ZP_05109459.1| signal peptide peptidase [Legionella drancourtii LLAP12] gi|254354215|gb|EET12882.1| signal peptide peptidase [Legionella drancourtii LLAP12] Length = 321 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 19/279 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNS---PHVARIAIRGQIEDSQ-----ELIERIERISR 62 R + L ++ F E S PHV I + G+I D++ + + +E + Sbjct: 42 RVIYLLIIGFAAYQFFGGGVDESGSNTKPHVGLIDLSGEIFDAKPANADDFAKGMESAYK 101 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASN 119 + A++V ++SPGGS E ++ I+ + + P V + ++ ASA Y ++ A++ Sbjct: 102 NSGLKAVVVRINSPGGSPVQAEYMYNTIKYYRAKHPEIKVYSVCVDLCASAAYYVAVAAD 161 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ S+VGSIGV++ ++K+GV+ + + K PFS + Q +Q Sbjct: 162 DIYASPASMVGSIGVIYSGFGFVDAINKIGVTRRLQTAGANKGFLDPFSPDSDSQKQKLQ 221 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ V + R G IWTG +A +GLID ++ + + Sbjct: 222 VMLDIVHEQFINKVKDGRGSRLHSDNDTFSGLIWTGEQALPLGLIDGFASSGQLARDV-- 279 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 + +D I D+ +N + KNL + + D +PL Sbjct: 280 IKIDSMI----DYTHKQNLFDRVTKNLGTA--MADELPL 312 >gi|332161870|ref|YP_004298447.1| putative periplasmic protease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666100|gb|ADZ42744.1| putative periplasmic protease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 348 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVHQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|238785808|ref|ZP_04629779.1| protease sohB [Yersinia bercovieri ATCC 43970] gi|238713300|gb|EEQ05341.1| protease sohB [Yersinia bercovieri ATCC 43970] Length = 284 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 72 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 131 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 132 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 191 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 192 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 235 >gi|229525671|ref|ZP_04415076.1| SohB protein peptidase U7 family [Vibrio cholerae bv. albensis VL426] gi|229339252|gb|EEO04269.1| SohB protein peptidase U7 family [Vibrio cholerae bv. albensis VL426] Length = 356 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 106 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 164 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 165 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 224 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 225 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 281 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 282 ATGEHWFGTQAKTLGLVDEI 301 >gi|261379532|ref|ZP_05984105.1| signal peptide peptidase SppA [Neisseria subflava NJ9703] gi|284797999|gb|EFC53346.1| signal peptide peptidase SppA [Neisseria subflava NJ9703] Length = 331 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 114/241 (47%), Gaps = 17/241 (7%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSAT 67 + LSL+ ++ ++ S H A I + G+I + Q L + +E + +A Sbjct: 58 IFLSLIFGLAEEEGKTTSIQARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNAK 117 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 118 AIIIRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYAD 177 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 178 PSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLGD 237 Query: 185 SYHWFVRLVSESRNIPY-DKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + F++ V R DK + GRI+TG EAK+VGLID G S+Y++ Sbjct: 238 IHQEFIKAVKLGRGARLKDKQYPDIFSGRIYTGKEAKQVGLIDDFG-------SIYSVAR 290 Query: 243 D 243 D Sbjct: 291 D 291 >gi|229220821|ref|NP_230705.2| putative periplasmic protease [Vibrio cholerae O1 biovar El Tor str. N16961] gi|229259766|ref|YP_001216528.2| putative periplasmic protease [Vibrio cholerae O395] gi|255745477|ref|ZP_05419425.1| SohB protein peptidase U7 family [Vibrio cholera CIRS 101] gi|262158448|ref|ZP_06029564.1| SohB protein peptidase U7 family [Vibrio cholerae INDRE 91/1] gi|262170309|ref|ZP_06037996.1| SohB protein peptidase U7 family [Vibrio cholerae RC27] gi|255736552|gb|EET91949.1| SohB protein peptidase U7 family [Vibrio cholera CIRS 101] gi|262021324|gb|EEY40038.1| SohB protein peptidase U7 family [Vibrio cholerae RC27] gi|262029889|gb|EEY48537.1| SohB protein peptidase U7 family [Vibrio cholerae INDRE 91/1] Length = 353 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 103 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 161 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 162 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 221 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 222 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 278 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +AK +GL+D + Sbjct: 279 ATGEHWFGTQAKALGLVDEI 298 >gi|220921986|ref|YP_002497287.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219946592|gb|ACL56984.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 302 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 6/181 (3%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 RD A+++ + SPGG+ + + I + KP++ V AASA Y I+ A++ + Sbjct: 99 RDPEVKAIVLDVDSPGGAVSGSDELSSMIFAARGTKPIVAHVDATAASAAYWIASAADEV 158 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEVNPKAVQMMQ 179 V T VGSIGV + + +KLGV + + KA+ P + A+ Q Sbjct: 159 VVTPTGAVGSIGVFGIHDDLSGAREKLGVKRTIISAGRFKADGVAGPLDDA---ALARRQ 215 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+++Y FVR V+ +RN+ G + A A G+ D +G +E Q L Sbjct: 216 ARVEAAYDMFVRAVARNRNVSLSAVRDGFGQGDMVDAAPAVAEGMADRLGTLDETLQRLG 275 Query: 239 A 239 A Sbjct: 276 A 276 >gi|318605616|emb|CBY27114.1| putative protease sohB [Yersinia enterocolitica subsp. palearctica Y11] Length = 348 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVHQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|291045064|ref|ZP_06570772.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011067|gb|EFE03064.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|317163613|gb|ADV07154.1| putative periplasmic protease [Neisseria gonorrhoeae TCDC-NG08107] Length = 366 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 155 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 214 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 215 IIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 274 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 275 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 310 >gi|157370899|ref|YP_001478888.1| putative periplasmic protease [Serratia proteamaculans 568] gi|157322663|gb|ABV41760.1| Peptidase S49 domain protein [Serratia proteamaculans 568] Length = 348 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + +++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLASSQLARLRTGGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNDTHE 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GLID +G +++ Sbjct: 256 LFKQFVHQQR--PSLDIDSVATGEHWFGTQAKEKGLIDAIGTSDDL 299 >gi|37526334|ref|NP_929678.1| putative periplasmic protease [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785765|emb|CAE14813.1| Possible protease sohB [Photorhabdus luminescens subsp. laumondii TTO1] Length = 348 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIV 122 D+ +++ L SPGG + + +++ + +T V ++AAS GY+++C ++ +V Sbjct: 131 DAKDEVLLRLESPGGMVHGYGLAASQLARLRQKGIRLTIVVDKVAASGGYMMACVADRVV 190 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA +++GSIGV+ Q P + L K + ++ + K + E + + Q+ + Sbjct: 191 AAPFAIIGSIGVVAQIPNIHKLLKKNDIDVELHTAGEYKRTLTVLGENTEQGRKKFQEDL 250 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + ++ F + R P ++ G W G++AK+ GLID +G Sbjct: 251 NQTHELFKSFIHTHR--PSLDVESVATGEYWYGSQAKEKGLIDEIG 294 >gi|56460146|ref|YP_155427.1| putative periplasmic protease [Idiomarina loihiensis L2TR] gi|56179156|gb|AAV81878.1| Periplasmic serine protease, ClpP family [Idiomarina loihiensis L2TR] Length = 332 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 7/162 (4%) Query: 69 LIVSLSSPGG--SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 ++V L S GG + Y G A + ++ ++ V + ++AAS GY+++C + ++AA Sbjct: 122 VLVRLESGGGVVNGY-GLAAAQLLRLREHNLTVNVAIDKVAASGGYMMACVGHKLMAAPF 180 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + +GSIGV+ Q P L K V + + + K + F E + + + +++ + Sbjct: 181 AFIGSIGVVAQIPNFHRLLKKHNVDFEQLTAGEYKRTLTIFGENTDEGRRKFKQDLEAIH 240 Query: 187 HWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V E+R+ + DK ++ G +W+G EAK++GLID V Sbjct: 241 RQFKSFVQENRSELDIDK---VATGEVWSGQEAKELGLIDEV 279 >gi|219681309|ref|YP_002456073.1| putative prohead protease [Erwinia phage phiEa21-4] gi|199580576|gb|ACH88963.1| putative prohead protease [Erwinia phage phiEa21-4] Length = 456 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 1/194 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + Q L + D S +++ + S GG A + R I++ N KPVI V Sbjct: 87 GGLSSYQGLTRAFDEAVADASVDKIVLMIDSGGGEAAGCFELARHIKEHSNGKPVIAYVD 146 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++CA++ I A+ + VGSIGV+ + ++K GV +K+ +K Sbjct: 147 ERACSAAYALACAASEIYASPNADVGSIGVIVIHQEFSKAMEKAGVQTNIIKAGEVKGMG 206 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +PF ++ +A ++Q VD+SY FV LVS SR I + + + R++ EA + LI Sbjct: 207 NPFEPLSDQAKDLIQKSVDNSYTSFVNLVSSSRGISAE-AVKDTGARVYGAQEALSLKLI 265 Query: 225 DVVGGQEEVWQSLY 238 D + +E L+ Sbjct: 266 DGIKTTDEFKDYLF 279 >gi|22125947|ref|NP_669370.1| putative periplasmic protease [Yersinia pestis KIM 10] gi|45441813|ref|NP_993352.1| putative periplasmic protease [Yersinia pestis biovar Microtus str. 91001] gi|51596464|ref|YP_070655.1| periplasmic protease [Yersinia pseudotuberculosis IP 32953] gi|149365865|ref|ZP_01887900.1| peptidase family U7 protein [Yersinia pestis CA88-4125] gi|153948350|ref|YP_001400900.1| periplasmic protease [Yersinia pseudotuberculosis IP 31758] gi|162418164|ref|YP_001606741.1| putative periplasmic protease [Yersinia pestis Angola] gi|165927409|ref|ZP_02223241.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. F1991016] gi|165938261|ref|ZP_02226820.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. IP275] gi|166010779|ref|ZP_02231677.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. E1979001] gi|166210633|ref|ZP_02236668.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. B42003004] gi|167400849|ref|ZP_02306355.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420332|ref|ZP_02312085.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424898|ref|ZP_02316651.1| peptidase, S49 family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024271|ref|YP_001720776.1| putative periplasmic protease [Yersinia pseudotuberculosis YPIII] gi|186895513|ref|YP_001872625.1| putative periplasmic protease [Yersinia pseudotuberculosis PB1/+] gi|218929312|ref|YP_002347187.1| putative periplasmic protease [Yersinia pestis CO92] gi|229358044|ref|YP_651485.2| putative periplasmic protease [Yersinia pestis Antiqua] gi|229559850|ref|YP_647612.2| putative periplasmic protease [Yersinia pestis Nepal516] gi|229894900|ref|ZP_04510078.1| predicted inner membrane peptidase [Yersinia pestis Pestoides A] gi|229897643|ref|ZP_04512799.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898288|ref|ZP_04513435.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. India 195] gi|229902147|ref|ZP_04517268.1| predicted inner membrane peptidase [Yersinia pestis Nepal516] gi|270490621|ref|ZP_06207695.1| putative signal peptide peptidase SppA, 36K type [Yersinia pestis KIM D27] gi|294503746|ref|YP_003567808.1| peptidase family U7 protein [Yersinia pestis Z176003] gi|21958888|gb|AAM85621.1|AE013808_4 putative protease [Yersinia pestis KIM 10] gi|45436675|gb|AAS62229.1| peptidase family U7 protein [Yersinia pestis biovar Microtus str. 91001] gi|51589746|emb|CAH21376.1| peptidase family U7 protein [Yersinia pseudotuberculosis IP 32953] gi|115347923|emb|CAL20845.1| peptidase family U7 protein [Yersinia pestis CO92] gi|149292278|gb|EDM42352.1| peptidase family U7 protein [Yersinia pestis CA88-4125] gi|152959845|gb|ABS47306.1| peptidase, S49 family [Yersinia pseudotuberculosis IP 31758] gi|162350979|gb|ABX84927.1| peptidase, S49 family [Yersinia pestis Angola] gi|165913922|gb|EDR32540.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. IP275] gi|165920675|gb|EDR37923.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. F1991016] gi|165990481|gb|EDR42782.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. E1979001] gi|166207813|gb|EDR52293.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. B42003004] gi|166962027|gb|EDR58048.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049702|gb|EDR61110.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056085|gb|EDR65863.1| peptidase, S49 family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750805|gb|ACA68323.1| Peptidase S49 domain protein [Yersinia pseudotuberculosis YPIII] gi|186698539|gb|ACC89168.1| Peptidase S49 domain protein [Yersinia pseudotuberculosis PB1/+] gi|229681043|gb|EEO77138.1| predicted inner membrane peptidase [Yersinia pestis Nepal516] gi|229688578|gb|EEO80647.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. India 195] gi|229693980|gb|EEO84029.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701995|gb|EEO90016.1| predicted inner membrane peptidase [Yersinia pestis Pestoides A] gi|262362134|gb|ACY58855.1| peptidase family U7 protein [Yersinia pestis D106004] gi|270339125|gb|EFA49902.1| putative signal peptide peptidase SppA, 36K type [Yersinia pestis KIM D27] gi|294354205|gb|ADE64546.1| peptidase family U7 protein [Yersinia pestis Z176003] gi|320014881|gb|ADV98452.1| putative inner membrane peptidase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 348 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + +++ R +T V ++AAS GY+++C ++ I+ A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLARLRQRGIRLTVAVDKVAASGGYMMACVADRIICAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|241758993|ref|ZP_04757105.1| protease [Neisseria flavescens SK114] gi|241320814|gb|EER57047.1| protease [Neisseria flavescens SK114] Length = 331 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 19/242 (7%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSAT 67 + LSL+ ++ + S H A I + G+I + Q L + +E + +A Sbjct: 58 IFLSLIFGLAEEEGKTTSIHARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNAK 117 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 118 AIIIRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYAD 177 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 178 PSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLGD 237 Query: 185 SYHWFVRLVSESRNIPY-DKTL--VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R DK V S GRI+TG EAK+VGLID G S+Y++ Sbjct: 238 IHQEFIKAVKLGRGTRLKDKQYPDVFS-GRIYTGKEAKQVGLIDDFG-------SIYSVA 289 Query: 242 VD 243 D Sbjct: 290 RD 291 >gi|323491950|ref|ZP_08097119.1| putative inner membrane peptidase [Vibrio brasiliensis LMG 20546] gi|323313808|gb|EGA66903.1| putative inner membrane peptidase [Vibrio brasiliensis LMG 20546] Length = 353 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 12/200 (6%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 104 EPHLFVLDFKGSIDAKEVASLREEVTAILAVARE--GDEVLLRLESGGGMVHGYGLASSQ 161 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 162 LDRIKAANLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVLKKY 221 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + ++ ++ F + E R + DK + Sbjct: 222 DIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHGLFKDFIRERRPELELDK---V 278 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +A K+GL+D + Sbjct: 279 ATGEHWFGTQAHKLGLVDEI 298 >gi|145598216|ref|YP_001162292.1| putative periplasmic protease [Yersinia pestis Pestoides F] gi|108775493|gb|ABG18012.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Yersinia pestis Nepal516] gi|108779482|gb|ABG13540.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Yersinia pestis Antiqua] gi|145209912|gb|ABP39319.1| peptidase family U7 protein [Yersinia pestis Pestoides F] Length = 343 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + +++ R +T V ++AAS GY+++C ++ I+ A + Sbjct: 131 VLLRLESPGGVVHGYGLAASQLARLRQRGIRLTVAVDKVAASGGYMMACVADRIICAPFA 190 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 191 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 250 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 251 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 294 >gi|82544274|ref|YP_408221.1| periplasmic protease [Shigella boydii Sb227] gi|187730620|ref|YP_001880101.1| putative periplasmic protease [Shigella boydii CDC 3083-94] gi|81245685|gb|ABB66393.1| putative protease [Shigella boydii Sb227] gi|187427612|gb|ACD06886.1| peptidase, S49 (protease IV) family [Shigella boydii CDC 3083-94] gi|320187510|gb|EFW62196.1| putative protease sohB [Shigella flexneri CDC 796-83] gi|332094825|gb|EGI99869.1| peptidase family S49 family protein [Shigella boydii 3594-74] Length = 349 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKYIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|212634753|ref|YP_002311278.1| putative periplasmic protease [Shewanella piezotolerans WP3] gi|212556237|gb|ACJ28691.1| SohB protein, peptidase U7 family [Shewanella piezotolerans WP3] Length = 343 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 8/209 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYA-GEAIFR 88 N P V I +G I D+ E+ E IS D +IV++ S GG + G A + Sbjct: 94 NDPKVFVIDFKGSI-DAGEVASLREEISAILTIADKGDEVIVNVESGGGMVHGYGLASSQ 152 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + K P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K Sbjct: 153 LDRLRKAEIPLSICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQVPNFNRLLKKH 212 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + K + F E + + Q ++ ++ F +S+ R P ++ Sbjct: 213 DIDYEQHTAGDFKRTLTIFGENTDEGREKFQKELEETHVLFKEFISKYR--PELDIAKVA 270 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G W G +A ++GLID V ++V L Sbjct: 271 TGEHWYGQQAIELGLIDEVATSDDVILKL 299 >gi|239998326|ref|ZP_04718250.1| putative periplasmic protease [Neisseria gonorrhoeae 35/02] gi|240014504|ref|ZP_04721417.1| putative periplasmic protease [Neisseria gonorrhoeae DGI18] gi|240079709|ref|ZP_04724252.1| putative periplasmic protease [Neisseria gonorrhoeae FA19] gi|240113719|ref|ZP_04728209.1| putative periplasmic protease [Neisseria gonorrhoeae MS11] gi|240116462|ref|ZP_04730524.1| putative periplasmic protease [Neisseria gonorrhoeae PID18] gi|240121026|ref|ZP_04733988.1| putative periplasmic protease [Neisseria gonorrhoeae PID24-1] gi|240122343|ref|ZP_04735299.1| putative periplasmic protease [Neisseria gonorrhoeae PID332] gi|240125076|ref|ZP_04737962.1| putative periplasmic protease [Neisseria gonorrhoeae SK-92-679] gi|240127057|ref|ZP_04739718.1| putative periplasmic protease [Neisseria gonorrhoeae SK-93-1035] gi|254494474|ref|ZP_05107645.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441683|ref|ZP_05795499.1| putative periplasmic protease [Neisseria gonorrhoeae DGI2] gi|268599789|ref|ZP_06133956.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602133|ref|ZP_06136300.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268680929|ref|ZP_06147791.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268683671|ref|ZP_06150533.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268685412|ref|ZP_06152274.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|226513514|gb|EEH62859.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268583920|gb|EEZ48596.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586264|gb|EEZ50940.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268621213|gb|EEZ53613.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268623955|gb|EEZ56355.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268625696|gb|EEZ58096.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 350 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 294 >gi|260776312|ref|ZP_05885207.1| SohB protein peptidase U7 family [Vibrio coralliilyticus ATCC BAA-450] gi|260607535|gb|EEX33800.1| SohB protein peptidase U7 family [Vibrio coralliilyticus ATCC BAA-450] Length = 349 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 12/199 (6%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + +G I+ + E + I ++R+ +++ L S GG + + Sbjct: 101 PHLFVLDFKGSIDAKEVASLREEVTAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 158 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 159 DRIKAAKLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVLKKYD 218 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 + + + + K + F E KA + ++ ++ F + E R + DK ++ Sbjct: 219 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHGLFKDFIRERRPELELDK---VA 275 Query: 209 DGRIWTGAEAKKVGLIDVV 227 G W G +A +GL+D + Sbjct: 276 TGEHWFGTQAHSLGLVDEI 294 >gi|194097841|ref|YP_002000886.1| putative periplasmic protease [Neisseria gonorrhoeae NCCP11945] gi|193933131|gb|ACF28955.1| putative protease [Neisseria gonorrhoeae NCCP11945] Length = 368 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 157 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 216 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 217 IIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 276 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 277 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 312 >gi|91228570|ref|ZP_01262490.1| sohB protein, peptidase U7 family protein [Vibrio alginolyticus 12G01] gi|91187894|gb|EAS74206.1| sohB protein, peptidase U7 family protein [Vibrio alginolyticus 12G01] Length = 336 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 12/205 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVASLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 + + + + K + F E KA + ++ ++ F + E R ++ DK ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERRPSLDLDK---VA 279 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G W G +AK++GL+D + +++ Sbjct: 280 TGEHWFGTQAKELGLVDDISTSDDI 304 >gi|153816961|ref|ZP_01969628.1| sohB protein, peptidase U7 family [Vibrio cholerae NCTC 8457] gi|126512548|gb|EAZ75142.1| sohB protein, peptidase U7 family [Vibrio cholerae NCTC 8457] Length = 255 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 5 RDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQ 63 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 64 LDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKN 123 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + + K + F E KA + + ++ ++ F + E R + DK + Sbjct: 124 DIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---V 180 Query: 208 SDGRIWTGAEAKKVGLID 225 + G W G +AK +GL+D Sbjct: 181 ATGEHWFGTQAKALGLVD 198 >gi|320176687|gb|EFW51725.1| putative protease sohB [Shigella dysenteriae CDC 74-1112] Length = 344 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 132 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 191 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 192 IVGSIGVVAQMPNFNRFLKSKYIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQ 251 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 252 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 299 >gi|313157920|gb|EFR57326.1| peptidase, S49 (protease IV) family protein [Alistipes sp. HGB5] Length = 190 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 14/131 (10%) Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKS----SPMKAEPSPFSEVNPKA 174 +IVA + +L GSIGV + L +KLG++I V+S S + +P + P Sbjct: 1 MIVADKLTLTGSIGVFGMILDTREALKNKLGITIDGVQSNASSSFLATQP-----LTPVQ 55 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 M+ VD Y F V+E RN+P +K L ++ GR+W+GA+A +GLID GG Sbjct: 56 RSMIMRGVDKVYTTFTNDVAEGRNLPIEKVLDIAGGRVWSGADALGIGLIDTYGG----L 111 Query: 235 QSLYALGVDQS 245 ++ AL VD++ Sbjct: 112 KTAIALAVDKA 122 >gi|268594186|ref|ZP_06128353.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268595855|ref|ZP_06130022.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268547575|gb|EEZ42993.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549643|gb|EEZ44662.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 359 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 148 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 207 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 208 IIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 267 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 268 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 303 >gi|222086932|ref|YP_002545466.1| protease protein [Agrobacterium radiobacter K84] gi|221724380|gb|ACM27536.1| protease protein [Agrobacterium radiobacter K84] Length = 409 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 14/202 (6%) Query: 59 RISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 +++ DD A I L SPGG A + + KPV V M ASA Y I+ A Sbjct: 91 QVALDDRALHSIAMLIDSPGGEANGADEFAAMVNAANKVKPVTAFVSGMGASAAYWIASA 150 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV-SIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + IV +E S+VGSIGV+ ++ GV ++ V S P P +E +Q Sbjct: 151 AGRIVLSEGSMVGSIGVVLGINDTTLADERRGVRKLQFVSSQSPNKRPDPNTEDGKSHIQ 210 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 M VDS F+ V+ R + + G + GAEA G+ D VG E+V Sbjct: 211 AM---VDSLASVFISKVAAYRGVSQADVIAKFGGGGMKVGAEAVNAGMADEVGQFEDVLA 267 Query: 236 SLYALGVDQSIRKIKDWNPPKN 257 ++ I++ K +PP+N Sbjct: 268 TM--------IQRGKALSPPRN 281 >gi|256827350|ref|YP_003151309.1| signal peptide peptidase SppA, 36K type [Cryptobacterium curtum DSM 15641] gi|256583493|gb|ACU94627.1| signal peptide peptidase SppA, 36K type [Cryptobacterium curtum DSM 15641] Length = 376 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 9/226 (3%) Query: 10 TRYVMLSLV-TLTVVYFSWSSHVEDNSPHVARIAIRGQIE------DSQELIERIERISR 62 T ++M S V TL + H + NS VA I + G I + L E ++ Sbjct: 86 TVFLMGSCVNTLIGAAREGAEHAQPNS--VAVITMSGTIGYNGTSCSPEGLKELLDEAQA 143 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + A+++ ++S GG+A AGE + ++ K KP++ + SA Y IS ++ I Sbjct: 144 DPNIKAVVLRVNSGGGTATAGEEMASYVRDFKASKPIVVSSAAINCSAAYEISSQADRIF 203 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A+++ +GSIG + Q + LGV+I ++ S+ K + + QD+V Sbjct: 204 VAKSTEIGSIGTVMQSIDYSGLMKLLGVNIDNIASAESKDSSYGSRPLTDEERAYYQDLV 263 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 D F V++ R++ ++ L+ G +TG A GL D +G Sbjct: 264 DQINAVFTDNVAQGRHLSAEEVSQLATGLPFTGVTAVNNGLADEIG 309 >gi|238798377|ref|ZP_04641859.1| protease sohB [Yersinia mollaretii ATCC 43969] gi|238717762|gb|EEQ09596.1| protease sohB [Yersinia mollaretii ATCC 43969] Length = 348 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++++ +T V ++AAS GY+++C ++ I++A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK GL+D +G +++ Sbjct: 256 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKDKGLVDAIGTSDDL 299 >gi|238754974|ref|ZP_04616323.1| protease sohB [Yersinia ruckeri ATCC 29473] gi|238706833|gb|EEP99201.1| protease sohB [Yersinia ruckeri ATCC 29473] Length = 348 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + ++++++ +T V ++AAS GY+++C ++ IV+A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLERLRHAGVRLTVAVDKVAASGGYMMACVADRIVSAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDLELHTAGEFKRTLTLFGENTEQGREKFREDLNETHK 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +AK+ GL+D +G +++ Sbjct: 256 LFKQFVKQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDL 299 >gi|153802311|ref|ZP_01956897.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-3] gi|124122136|gb|EAY40879.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-3] Length = 323 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 75 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 133 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 134 RLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 193 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + + ++ ++ F + E R + DK ++ Sbjct: 194 EFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK---VAT 250 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 251 GEHWFGTQAKALGLVDEI 268 >gi|71278653|ref|YP_267936.1| putative periplasmic protease [Colwellia psychrerythraea 34H] gi|71144393|gb|AAZ24866.1| sohB protein, peptidase U7 family [Colwellia psychrerythraea 34H] Length = 349 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 11/212 (5%) Query: 32 EDNSP---HVARIAIRGQIEDSQELIERIERISRDDSATA----LIVSLSSPGGSAYAGE 84 ED P HV + G I D++E+ E +S S + V L S GG + Sbjct: 94 EDKEPSKSHVFVVDFNGSI-DAKEVSSLREEVSAILSVAKPEDEVFVRLESGGGMVHGYG 152 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++ P+ V ++AAS GY+++C +N I++A +++GSIGV+ Q P Sbjct: 153 LASSQLDRIRQHNIPLTVSVDKVAASGGYMMACVANNIISAPFAILGSIGVIAQVPNFNK 212 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + K + F E K + + ++ ++ F VSE R P Sbjct: 213 LLKKHDIDFEQFTAGEFKRTVTMFGENTEKGKEKFIEELEETHVLFKNFVSERR--PSLD 270 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ G W G A ++GL+D + ++ Q Sbjct: 271 IVKVATGEHWFGTTALELGLVDSIQTSDDYLQ 302 >gi|225077079|ref|ZP_03720278.1| hypothetical protein NEIFLAOT_02132 [Neisseria flavescens NRL30031/H210] gi|224951636|gb|EEG32845.1| hypothetical protein NEIFLAOT_02132 [Neisseria flavescens NRL30031/H210] Length = 331 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 19/242 (7%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSAT 67 + LSL+ ++ + S H A I + G+I + Q L + +E + +A Sbjct: 58 IFLSLIFGLAEEEGKTTSIHARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNAK 117 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 118 AIIIRANSPGGSPVVSNTAFNEVRRLKAEHKNIPVYLVAEDMCASGCYYIAAAADKIYAD 177 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 178 PSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLGD 237 Query: 185 SYHWFVRLVSESRNIPY-DKTL--VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R DK V S GRI+TG EAK+VGLID G S+Y++ Sbjct: 238 IHQEFIKAVKLGRGARLKDKQYPDVFS-GRIYTGKEAKQVGLIDDFG-------SIYSVA 289 Query: 242 VD 243 D Sbjct: 290 RD 291 >gi|209884719|ref|YP_002288576.1| peptidase S49 [Oligotropha carboxidovorans OM5] gi|209872915|gb|ACI92711.1| peptidase S49 [Oligotropha carboxidovorans OM5] Length = 432 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 2/194 (1%) Query: 50 SQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S E I+ + +RDD+A ++I+ + SPGG A +++V ++K V+ V+ MAA Sbjct: 101 SYEGIQHQLKSARDDAAVKSIILDIHSPGGEAVGAFETAAIVREVASKKKVVAVVNGMAA 160 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y I + IV ET + GSIGV+ + LD G++ + + K + + Sbjct: 161 SAAYAIPSGATEIVTTETGVSGSIGVVLLHADFSRKLDHDGITPTLIHAGAHKVDGNSLE 220 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVV 227 + +Q VD+ Y F+ V++ R ++ R + G A GL D V Sbjct: 221 PLTDAVKSDLQAEVDAFYETFLATVAKGRGGRLSVAAARKTEARTFIGKAAVDAGLADRV 280 Query: 228 GGQEEVWQSLYALG 241 G E V L G Sbjct: 281 GSFESVLAELSRAG 294 >gi|270262110|ref|ZP_06190382.1| hypothetical protein SOD_b03170 [Serratia odorifera 4Rx13] gi|270043986|gb|EFA17078.1| hypothetical protein SOD_b03170 [Serratia odorifera 4Rx13] Length = 348 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + +++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLASSQLARLRTGGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGQFKRTLTLFGENTEQGREKFREDLNETHE 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G++AK+ GLID +G +++ Sbjct: 256 LFKEFVHQQR--PSLDIDSVATGEHWFGSQAKEKGLIDAIGTSDDL 299 >gi|256018482|ref|ZP_05432347.1| putative periplasmic protease [Shigella sp. D9] gi|332279537|ref|ZP_08391950.1| conserved hypothetical protein [Shigella sp. D9] gi|324117536|gb|EGC11442.1| peptidase S49 [Escherichia coli E1167] gi|332101889|gb|EGJ05235.1| conserved hypothetical protein [Shigella sp. D9] Length = 349 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + + ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFCEELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|323499379|ref|ZP_08104355.1| putative inner membrane peptidase [Vibrio sinaloensis DSM 21326] gi|323315564|gb|EGA68599.1| putative inner membrane peptidase [Vibrio sinaloensis DSM 21326] Length = 353 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + +G I+ + E + I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFKGSIDAKEVASLREEVTAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRLKAAKLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVLKKYD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + + ++ ++ F + E R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRERR--PALELEKVAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +A ++GL+D + Sbjct: 281 GEHWFGTQAHELGLVDEI 298 >gi|262393791|ref|YP_003285645.1| SohB protein peptidase U7 family [Vibrio sp. Ex25] gi|262337385|gb|ACY51180.1| SohB protein peptidase U7 family [Vibrio sp. Ex25] Length = 353 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 12/205 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVASLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 + + + + K + F E KA + ++ ++ F + E R ++ DK ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERRPSLDLDK---VA 279 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G W G +AK++GL+D + +++ Sbjct: 280 TGEHWFGTQAKELGLVDDISTSDDI 304 >gi|89095506|ref|ZP_01168413.1| peptidase, U7 family protein [Oceanospirillum sp. MED92] gi|89080226|gb|EAR59491.1| peptidase, U7 family protein [Oceanospirillum sp. MED92] Length = 353 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 5/164 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIV 122 ++ +++ L SPGG + I+++K ++ +T V +AAS GY+++C ++ ++ Sbjct: 133 EAEDEIVIRLESPGGMVHEYGLASSQIERIKRKELSLTICVDRVAASGGYMMACLADKLI 192 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA ++VGSIGV+ Q P L K V + + + K + F E K + + + Sbjct: 193 AAPFAIVGSIGVIAQLPNFHRLLKKHDVDYEVLTAGEYKRTLTVFGENTEKGREKFVEEL 252 Query: 183 DSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ F V E R + DK ++ G IW G +A + L+D Sbjct: 253 EETHELFKNFVHEYRPQVDIDK---VATGEIWFGKQALENQLVD 293 >gi|261821585|ref|YP_003259691.1| periplasmic protease [Pectobacterium wasabiae WPP163] gi|261605598|gb|ACX88084.1| Peptidase S49 domain protein [Pectobacterium wasabiae WPP163] Length = 348 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRQGGVRLTVSVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IVGSIGVVAQIPNFHRLLKNKDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHT 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +AK +GLID +G +++ Sbjct: 256 LFKDFVQQMR--PSLDIDSVATGEHWFGTQAKDLGLIDAIGTSDDL 299 >gi|59801605|ref|YP_208317.1| putative periplasmic protease [Neisseria gonorrhoeae FA 1090] gi|59718500|gb|AAW89905.1| putative serine protease [Neisseria gonorrhoeae FA 1090] Length = 350 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 VIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 294 >gi|157157433|ref|YP_001462568.1| putative periplasmic protease [Escherichia coli E24377A] gi|300926654|ref|ZP_07142430.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|301327003|ref|ZP_07220292.1| putative signal peptide peptidase SppA [Escherichia coli MS 78-1] gi|157079463|gb|ABV19171.1| peptidase, S49 (protease IV) family [Escherichia coli E24377A] gi|300417320|gb|EFK00631.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|300846386|gb|EFK74146.1| putative signal peptide peptidase SppA [Escherichia coli MS 78-1] Length = 349 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + + + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGDNTEEGREKFREELNETHQ 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V R P ++ G W G +A + GL+D + +EV SL Sbjct: 257 LFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSL 304 >gi|269966535|ref|ZP_06180618.1| sohB protein, peptidase U7 family [Vibrio alginolyticus 40B] gi|269828879|gb|EEZ83130.1| sohB protein, peptidase U7 family [Vibrio alginolyticus 40B] Length = 353 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 12/205 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVASLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 + + + + K + F E KA + ++ ++ F + E R ++ DK ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERRPSLDLDK---VA 279 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEV 233 G W G +AK++GL+D + +++ Sbjct: 280 TGEHWFGTQAKELGLVDDISTSDDI 304 >gi|222111810|ref|YP_002554074.1| peptidase s49 [Acidovorax ebreus TPSY] gi|221731254|gb|ACM34074.1| peptidase S49 [Acidovorax ebreus TPSY] Length = 347 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 7/202 (3%) Query: 34 NSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 ++PH A + ++G+I E S E + R + +DS + A+++ ++SPGGS I Sbjct: 93 STPHTAVVDVKGEIAAGAEASAEFVVAAMRSAFEDSGSQAVVLLINSPGGSPVQAGIIND 152 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I ++K + KPV V E ASA Y I+ A++ I + S+VGSIGVL ++ Sbjct: 153 EIVRLKAKYNKPVYAVVEETCASAAYYIAAAADGIFVDKASIVGSIGVLMDGFGFTGAME 212 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS Q ++D + F+ +V + R T Sbjct: 213 KLGVERRLLTAGENKGFLDPFSPQTETQRAYAQAMLDQIHQQFIGVVKQGRGDRLKVTPE 272 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 G WTG +A ++GL D +G Sbjct: 273 TFSGLFWTGQQAVEMGLADQLG 294 >gi|157374833|ref|YP_001473433.1| putative periplasmic protease [Shewanella sediminis HAW-EB3] gi|157317207|gb|ABV36305.1| peptidase S49, N-terminal domain protein [Shewanella sediminis HAW-EB3] Length = 343 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 111/228 (48%), Gaps = 12/228 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 P V + +G I D+ E+ E IS +S +IV++ S GG + + Sbjct: 96 PRVFVVDFKGSI-DASEVASLREEISAIIAIAESGDEVIVNVESGGGMVHGYGLASSQLD 154 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ K P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P + K + Sbjct: 155 RLRQAKLPLTICVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQVPNFNRLMKKHDI 214 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + K + F E + Q+ ++ ++ F +++ R P ++ G Sbjct: 215 DYEQHTAGDFKRTLTLFGENTDEGRAKFQEELEETHKLFKSFIAQYR--PELDLGKVATG 272 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 W G +A +GLID + ++V + L +++++ K++ + KN+ Sbjct: 273 EHWYGQQAIDLGLIDEIATSDDV---VMKLALERTVIKVR-YQLKKNF 316 >gi|293399691|ref|ZP_06643843.1| serine protease SohB [Neisseria gonorrhoeae F62] gi|291609942|gb|EFF39065.1| serine protease SohB [Neisseria gonorrhoeae F62] Length = 359 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ IV+A + Sbjct: 148 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFA 207 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 208 VIGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 267 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 268 LFKQFVSENR--PGLDIEKIATGEHWFGRQALALNLID 303 >gi|327198436|ref|YP_004327024.1| head maturation protease [Erwinia phage phiEa104] gi|311875132|emb|CBX44392.1| head maturation protease [Erwinia phage phiEa104] Length = 456 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 1/194 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + Q L + D S +++ + S GG A + R I++ N KPVI V Sbjct: 87 GGLSSYQGLTRAFDEAVADASVDKIVLMIDSGGGEAAGCFELARHIKEHSNGKPVIAYVD 146 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++CA++ I A+ + VGSIGV+ + ++K G+ +K+ +K Sbjct: 147 ERACSAAYALACAASEIYASPNADVGSIGVIVIHQEFSKAMEKAGIQTNIIKAGEVKGMG 206 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +PF ++ +A ++Q VD+SY FV LVS SR I + + + R++ EA + LI Sbjct: 207 NPFEPLSDQAKDLIQKSVDNSYTSFVNLVSSSRGISAE-AVKDTGARVYGAQEALSLKLI 265 Query: 225 DVVGGQEEVWQSLY 238 D + +E L+ Sbjct: 266 DGIKTTDEFKDYLF 279 >gi|161831390|ref|YP_001595988.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 331] gi|161763257|gb|ABX78899.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 331] Length = 313 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 14/229 (6%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNI 120 D ++ +++ ++SPGGS I I ++K + K V+ + AS YL+S ++ Sbjct: 91 DKNSKGVVLLINSPGGSPVQASIIRDKIIELKKQYHKKVVVVGEDELASGAYLVSTGADK 150 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I +L GSIGV+ L K+GV+ + + K PF V P+ V+ + Sbjct: 151 IYVNNDTLTGSIGVIMGGFGFVDTLKKVGVTRRLFVAGDHKDRLDPFQPVKPEDVEKINK 210 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+ + F+ V + R + D+ + S G WTG EA ++G++D G +W L Sbjct: 211 VLAQVHQNFIDQVIQGRGNRLHGDRQEIFS-GDFWTGKEAAQLGVVD---GTANLWTVLE 266 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS---SLLEDTIPLMKQTKV 284 + ++ KD+ ++ N + L +T PL +Q +V Sbjct: 267 R---EFGVKDYKDYTTRVSFLQALFHNTATELYFHLTNETSPLREQMQV 312 >gi|192359025|ref|YP_001982509.1| putative periplasmic protease [Cellvibrio japonicus Ueda107] gi|190685190|gb|ACE82868.1| possible protease SohB [Cellvibrio japonicus Ueda107] Length = 364 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V + S GG + + ++ ++ P+ V ++AAS GY+++C +N IVAA + Sbjct: 151 VVVKVESGGGMVHGYGLASSQLARITHKHIPLTVCVDKVAASGGYMMACVANKIVAAPFA 210 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E K + ++ ++ Sbjct: 211 IVGSIGVIAQLPNFHKLLKKNDIDFEMFTAGEFKRTVTMFGENTEKGRAKFVEELEDTHV 270 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V E R P ++ G +W G AK V LID Sbjct: 271 LFKEFVGEHR--PQVDIAKVATGEVWFGRRAKDVNLID 306 >gi|300716945|ref|YP_003741748.1| peptidase, family U7 [Erwinia billingiae Eb661] gi|299062781|emb|CAX59901.1| Peptidase, family U7 [Erwinia billingiae Eb661] Length = 349 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ +T V ++AAS GY+++C ++ IVAA S Sbjct: 137 VLLRLESPGGVVHGYGLASSQLQRLRDKGIRLTVAVDKVAASGGYMMACVADRIVAAPFS 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + + ++ + K + F E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQIPNFNRLLKRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREDLNETHL 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V + R P ++ G W G +A + GL+D +G +++ Sbjct: 257 LFKQFVHQMR--PSLDIDSVATGEHWFGTQALEKGLVDAIGTSDDL 300 >gi|227111423|ref|ZP_03825079.1| putative periplasmic protease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 348 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRQGGVRLTVSVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IVGSIGVVAQIPNFHRLLKNKDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHT 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +AK +GLID +G +++ Sbjct: 256 LFKDFVQQMR--PSLDIDSVATGEHWFGTQAKDLGLIDAIGTSDDL 299 >gi|288941275|ref|YP_003443515.1| peptidase S49 [Allochromatium vinosum DSM 180] gi|288896647|gb|ADC62483.1| peptidase S49 [Allochromatium vinosum DSM 180] Length = 338 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L + GG + +++ R P+ V ++AAS GYL++C ++ I+AA + Sbjct: 132 VLVRLDNAGGMVSEHGLAASQLARLRARGIPLTIAVDKVAASGGYLMACVADRIIAAPFA 191 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGVL + P L++ GV + + K + F E + Q +++ ++ ++ Sbjct: 192 VIGSIGVLAELPNFHRVLERYGVDFELHTAGEYKRTLTLFGENTDEGRQKLREQLEETHR 251 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F VSE R P ++ G W G A ++GL+D + Sbjct: 252 LFKAFVSEYR--PGLDLERVATGEYWHGRRAVELGLVDAI 289 >gi|29655269|ref|NP_820961.1| U7 family peptidase [Coxiella burnetii RSA 493] gi|153206991|ref|ZP_01945809.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii 'MSU Goat Q177'] gi|154705950|ref|YP_001425390.1| signal peptide peptidase [Coxiella burnetii Dugway 5J108-111] gi|165918732|ref|ZP_02218818.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 334] gi|212213444|ref|YP_002304380.1| signal peptide peptidase [Coxiella burnetii CbuG_Q212] gi|212219494|ref|YP_002306281.1| signal peptide peptidase [Coxiella burnetii CbuK_Q154] gi|29542541|gb|AAO91475.1| signal peptide peptidase [Coxiella burnetii RSA 493] gi|120577064|gb|EAX33688.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii 'MSU Goat Q177'] gi|154355236|gb|ABS76698.1| signal peptide peptidase [Coxiella burnetii Dugway 5J108-111] gi|165917560|gb|EDR36164.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 334] gi|212011854|gb|ACJ19235.1| signal peptide peptidase [Coxiella burnetii CbuG_Q212] gi|212013756|gb|ACJ21136.1| signal peptide peptidase [Coxiella burnetii CbuK_Q154] Length = 313 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 14/229 (6%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNI 120 D ++ +++ ++SPGGS I I ++K + K V+ + AS YL+S ++ Sbjct: 91 DKNSKGVVLLINSPGGSPVQASIIRDKIIELKKQYHKKVVVVGEDELASGAYLVSTGADK 150 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I +L GSIGV+ L K+GV+ + + K PF V P+ V+ + Sbjct: 151 IYVNNDTLTGSIGVIMGGFGFVDTLKKVGVTRRLFVAGDHKDRLDPFQPVKPEDVEKINK 210 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+ + F+ V + R + D+ + S G WTG EA ++G++D G +W L Sbjct: 211 VLAQVHQNFIDQVIQGRGNRLHGDRQEIFS-GDFWTGKEAAQLGVVD---GTANLWTVLE 266 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS---SLLEDTIPLMKQTKV 284 + ++ KD+ ++ N + L +T PL +Q +V Sbjct: 267 R---EFGVKDYKDYTTRVSFLQALFHNTATELYFHLTNETSPLREQMQV 312 >gi|157961477|ref|YP_001501511.1| putative periplasmic protease [Shewanella pealeana ATCC 700345] gi|157846477|gb|ABV86976.1| Peptidase S49 domain protein [Shewanella pealeana ATCC 700345] Length = 342 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 10/214 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEA 85 VE+ P V + +G I D+ E+ E IS D +IV++ S GG + Sbjct: 89 QVEEAEPKVFVVDFKGSI-DAGEVASLREEISAILAIADKGDEVIVNVESGGGMVHGYGL 147 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ + P+ V ++AAS GY+++C +N I +A ++VGSIGV+ Q P Sbjct: 148 ASSQLDRLRQAEIPLTICVDKVAASGGYMMACVANKIYSAPFAIVGSIGVVAQVPNFNRL 207 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDK 203 L K + + + K + F E + + Q ++ ++ F +++ R ++ DK Sbjct: 208 LKKHDIDYEQHTAGDFKRTLTIFGENTDEGREKFQKELEETHVLFKAFIAKYRPDLDLDK 267 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GL+D + ++V L Sbjct: 268 ---VATGEHWYGQQAIELGLVDEIATSDDVIMKL 298 >gi|120554450|ref|YP_958801.1| putative periplasmic protease [Marinobacter aquaeolei VT8] gi|120324299|gb|ABM18614.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Marinobacter aquaeolei VT8] Length = 353 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG +A + +++++ +T V ++AAS GY+++C ++ I+A+ + Sbjct: 140 VVIRLESGGGLVHAYGLAAAQLDRIRSKGIKLTACVDKVAASGGYMMACVADRIIASPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL K V + + + K + F E K Q + ++ ++ Sbjct: 200 VLGSIGVVAQLPNFHRFLKKNDVDFEVLTAGEHKRTLTIFGENTDKGRQKFLEDLEDTHV 259 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F VSE R P +++G IW G A V LID + +E Sbjct: 260 LFKEYVSERR--PDLDIQAVANGDIWFGKRALDVKLIDEIKTSDE 302 >gi|167470520|ref|ZP_02335224.1| peptidase, S49 family protein [Yersinia pestis FV-1] Length = 321 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 83/161 (51%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + +++ R +T V ++AAS GY+++C ++ I+ A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLARLRQRGIRLTVAVDKVAASGGYMMACVADRIICAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F + V + R P ++ G W G +AK+ GL+D +G Sbjct: 256 LFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIG 294 >gi|22299153|ref|NP_682400.1| protease IV-like protein [Thermosynechococcus elongatus BP-1] gi|22295335|dbj|BAC09162.1| tlr1610 [Thermosynechococcus elongatus BP-1] Length = 369 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 105/202 (51%), Gaps = 18/202 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAAS 109 E+ ++ ++D + A+ V++ +PGG+ + +AI I++ + +KPV + +AAS Sbjct: 102 EVQRQLAEAAKDKTIQAVFVNIKTPGGTIFGSQAIAEGIRRYRKATQKPVYAFIEGIAAS 161 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQ--YPYVKPF-----LDKLGVSIKSVKSSPMKA 162 G ++ I A S+VGSIG+L + Y +P L + GV+ S++ + A Sbjct: 162 GGVWAMVTADQIYADHGSMVGSIGILGPSVFYYDRPTSLDNGLLRGGVTANSIEERTLSA 221 Query: 163 EPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTG 215 S PF + P+ +Q++Q ++ Y F+ V+++R I D +++ ++ I++ Sbjct: 222 GRSKDIGNPFRRLTPQEIQVLQAGLEQEYTKFINHVAQARGI--DPSVIRNEMGAMIFSN 279 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 +A++ LID + E +L Sbjct: 280 DQAQRYRLIDGTRSRSETLNAL 301 >gi|253688400|ref|YP_003017590.1| Peptidase S49 domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754978|gb|ACT13054.1| Peptidase S49 domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 348 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRQGGVRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IVGSIGVVAQIPNFHRLLKNKDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHT 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +AK +GLID +G +++ Sbjct: 256 LFKDFVQQMR--PSLDIDSVATGEHWFGTQAKDLGLIDAIGTSDDL 299 >gi|171913618|ref|ZP_02929088.1| signal peptide peptidase SppA, 36K type [Verrucomicrobium spinosum DSM 4136] Length = 276 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 4/179 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D + + E +++ D + T +++ + SPGG I ++ K V V+ A Sbjct: 88 DLEVIDEALQQAEHDRAVTHVVLDIHSPGGGVTGTPETAARIARLAQTKEVHAFVNCQAC 147 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y ++ +++I AA +S +GSIGV L+ G ++ +K+ KA + F Sbjct: 148 SAAYWLASQADVIAAAPSSCIGSIGVYMALLDETRALEMEGYTVNLIKAGKHKAMGASFQ 207 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ + + Q VDS Y F + V+ SR I D T+ G+ + G A K+GL+DV+ Sbjct: 208 KLTDEERAIFQGQVDSIYADFKKAVTASRRIA-DSTM---QGQSFDGKTALKLGLVDVL 262 >gi|121611687|ref|YP_999494.1| peptidase S49 [Verminephrobacter eiseniae EF01-2] gi|121556327|gb|ABM60476.1| peptidase S49 [Verminephrobacter eiseniae EF01-2] Length = 323 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 12/208 (5%) Query: 31 VEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + ++PH A + I+G+I ++ ++ + +D + AL++ ++SPGGS Sbjct: 59 ISKSAPHTAMVDIKGEIAAGAGASAEFVVAAMRSALENDGSQALVLLINSPGGSPVQAGI 118 Query: 86 IFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+ K K+ KP+ V E ASA Y I+ A++ I + S+VGSIGVL Sbjct: 119 INDEIRRLKAKHNKPIYAVVEETCASAAYYIAAATDDIYVDKASIVGSIGVLMDGFGFTG 178 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++KLGV + + S K PFS K Q ++D + F+ V R Sbjct: 179 TMEKLGVERRLLTSGENKGFLDPFSPQTDKQRAYAQTMLDQIHQQFIAAVKAGRAERLKS 238 Query: 204 TLVLSD---GRIWTGAEAKKVGLIDVVG 228 T SD G WTG +A ++GL D +G Sbjct: 239 T--SSDTFSGLFWTGQQAVEMGLADKLG 264 >gi|330722505|gb|EGH00330.1| putative protease sohB [gamma proteobacterium IMCC2047] Length = 356 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 87/165 (52%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 ++++LSS GG +A ++++K++ +T V ++AAS GY+++C ++ ++AA + Sbjct: 142 VVLTLSSGGGMVHAYGLASSQVKRIKDKGVALTVCVDKVAASGGYMMACVADKLLAAPFA 201 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + +++ + K + F E K + + ++ ++ Sbjct: 202 VLGSIGVVAQLPNFHRLLKKHDIDYETLTAGEYKRTLTMFGENTDKGREKFTEDLEDTHE 261 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V E+R P ++ G +W G A + L+D + +E Sbjct: 262 LFKEFVKENR--PQLDIDAIATGEVWFGQRALEKNLVDELKTSDE 304 >gi|254486961|ref|ZP_05100166.1| peptidase S49 [Roseobacter sp. GAI101] gi|214043830|gb|EEB84468.1| peptidase S49 [Roseobacter sp. GAI101] Length = 265 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 2/163 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAE 125 A+ + +SSPGGS I I+++ + K PVI V ++AAS GY ++ A++ + A Sbjct: 51 AVALEISSPGGSPVQSSLIGARIRRLADEKKIPVIAFVEDVAASGGYWLAAAADEVYADP 110 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +S+VGSIGV+ + + G+ + + K+ PF P+ V+ ++ +++ Sbjct: 111 SSVVGSIGVISSSFGASELISRHGIERRVYTAGQSKSMLDPFRPEKPEDVERLKHILNDI 170 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ V R + L G IW A ++GLID +G Sbjct: 171 HTNFIDHVKARRGDKLAPDVDLFTGEIWLAKRAAELGLIDGIG 213 >gi|304386997|ref|ZP_07369255.1| protease SohB [Neisseria meningitidis ATCC 13091] gi|304338954|gb|EFM05050.1| protease SohB [Neisseria meningitidis ATCC 13091] Length = 366 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ I +A + Sbjct: 155 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIASAPFA 214 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 215 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 274 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 275 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 310 >gi|301156336|emb|CBW15807.1| predicted inner membrane peptidase [Haemophilus parainfluenzae T3T1] Length = 351 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 12/197 (6%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 P V + +G I S+ E I I +++ D +++ L SPGG + + Sbjct: 102 PCVYVLDFKGDISASETTALREEISAIINVAKADDE--VLLRLESPGGVVHGYGLAASQL 159 Query: 91 QKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K + +T V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P + L K Sbjct: 160 ARLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPNIHRLLKKHD 219 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 V + + + K + E K Q Q ++ ++ F + V+++R ++ DK ++ Sbjct: 220 VDVDVMTAGEFKRTVTVLGENTEKGKQKFQAELEETHQLFKQFVAQNRPHLDVDK---VA 276 Query: 209 DGRIWTGAEAKKVGLID 225 G W G +A ++ L+D Sbjct: 277 TGEHWFGQQALELQLVD 293 >gi|83945357|ref|ZP_00957705.1| probable proteinase [Oceanicaulis alexandrii HTCC2633] gi|83851191|gb|EAP89048.1| probable proteinase [Oceanicaulis alexandrii HTCC2633] Length = 281 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 9/211 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAA 108 Q + ++IE+ A+A+ + ++SPGGS I I+ + N K V+ ++AA Sbjct: 51 QRVEKQIEKAFSMTDASAVALLINSPGGSPVQSRLIHERIRALANEKDKAVLAFCEDVAA 110 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY ++ A++ I +++GSIGV+ ++KLGV + + K PFS Sbjct: 111 SGGYFLAVAADEIFVDPATIIGSIGVINAGFGFTEAMEKLGVERRVKTAGKSKLIADPFS 170 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDV 226 + M+ ++++ + F+ LV R + + L DG ++TG EA + G+ D Sbjct: 171 PETDAQKERMERLLNTVHGQFIELVKSRRGEKLNPQEGEELFDGSVFTGTEALQNGIADE 230 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +G V ++ + V ++K ++P + Sbjct: 231 IGDLRSVVRARFGEDV-----RVKVFSPARQ 256 >gi|269962018|ref|ZP_06176372.1| sohB protein, peptidase U7 family [Vibrio harveyi 1DA3] gi|269833102|gb|EEZ87207.1| sohB protein, peptidase U7 family [Vibrio harveyi 1DA3] Length = 353 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I + ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVGSLREEITAVLAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + ++ ++ F +SE R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFISERR--PALELEKVAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK++GL+D + Sbjct: 281 GEHWFGTQAKELGLVDEI 298 >gi|221068706|ref|ZP_03544811.1| peptidase S49 [Comamonas testosteroni KF-1] gi|220713729|gb|EED69097.1| peptidase S49 [Comamonas testosteroni KF-1] Length = 348 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 108/212 (50%), Gaps = 7/212 (3%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPGG 78 +F ++ SPH A + I+G+I + S E + R + +DS + A+++ ++SPGG Sbjct: 85 FFKDTATKTSTSPHTAVVEIKGEIASGADASAEFVVAAMRSAFEDSGSRAVVLLINSPGG 144 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S I + ++K + KP+ V E ASA Y I+ A++ I + S+VGSIGVL Sbjct: 145 SPVQAGIINDEMTRLKAKYNKPLYAVVEESCASAAYYIAAAADEIFVDKASIVGSIGVLM 204 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +DK+GV + + + K PFS ++ + + +++ + F+ +V Sbjct: 205 DGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSSQQKEFALQMLEQIHQQFIGVVKAG 264 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R ++ + G WTG +A ++GL D +G Sbjct: 265 RGDRLHESPEMFSGLFWTGQQAVELGLADKLG 296 >gi|15677437|ref|NP_274593.1| putative periplasmic protease [Neisseria meningitidis MC58] gi|7226836|gb|AAF41940.1| putative protease [Neisseria meningitidis MC58] Length = 367 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ I +A + Sbjct: 156 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIASAPFA 215 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 216 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 275 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 276 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 311 >gi|261253391|ref|ZP_05945964.1| SohB protein peptidase U7 family [Vibrio orientalis CIP 102891] gi|260936782|gb|EEX92771.1| SohB protein peptidase U7 family [Vibrio orientalis CIP 102891] Length = 349 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 10/199 (5%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 100 EPHLFVLDFKGSIDAKEVASLREEVTAILAVARE--GDEVLLRLESGGGMVHGYGLASSQ 157 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 158 LDRLKAAKLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVLKKY 217 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E KA + + ++ ++ F + E R P + ++ Sbjct: 218 DIEYEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRERR--PALELEKVA 275 Query: 209 DGRIWTGAEAKKVGLIDVV 227 G W G +A ++GL+D + Sbjct: 276 TGEHWFGTQAHELGLVDEI 294 >gi|15789821|ref|NP_279645.1| proteinase IV-like protein [Halobacterium sp. NRC-1] gi|169235542|ref|YP_001688742.1| proteinase IV [Halobacterium salinarum R1] gi|10580211|gb|AAG19125.1| proteinase IV homolog [Halobacterium sp. NRC-1] gi|167726608|emb|CAP13393.1| proteinase IV [Halobacterium salinarum R1] Length = 300 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 18/210 (8%) Query: 22 VVYFSWSSHVEDNSPHVARI--AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS 79 V S S +NS V I AI G D+ + + + I +DS A+++ +SSPGG+ Sbjct: 32 VALQSGSDSGPENSVAVVNIESAITGGTGDA--VAKELRSIRGNDSIDAVVLRVSSPGGA 89 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 E +RA++++ KPV+T V AAS GY ++ I +SLVGS+GV Sbjct: 90 VSGSEVQYRAVKRLAQEKPVVTSVRGPAASGGYYTIAPTDKIYVTPSSLVGSVGV----- 144 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + GV + KS+P K P + +A Q +D V + ++ Sbjct: 145 -ISSVSENNGVPSR-WKSAPDKGTTGPADKARARAATFRQSFLD------VVMNERGDDL 196 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D+ + +I+ G +A ++GL D +GG Sbjct: 197 TVDRE-TIGRAQIYAGNKAVEIGLADEIGG 225 >gi|258621801|ref|ZP_05716832.1| sohB protein, peptidase U7 family [Vibrio mimicus VM573] gi|258586032|gb|EEW10750.1| sohB protein, peptidase U7 family [Vibrio mimicus VM573] Length = 356 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 108 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 166 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 167 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 226 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + + ++ ++ F + + R + DK ++ Sbjct: 227 EFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHRPTLDLDK---VAT 283 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 284 GEHWFGTQAKTLGLVDEI 301 >gi|117919978|ref|YP_869170.1| putative periplasmic protease [Shewanella sp. ANA-3] gi|117612310|gb|ABK47764.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. ANA-3] Length = 338 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIF 87 ED+ V I +G I D+ E+ E IS + ++V++ S GG + Sbjct: 88 EDSKGKVFVIDFKGSI-DAAEVASLREEISAILTIAEKGDEVVVNVESGGGMVHGYGLAS 146 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + +++ + P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 147 SQLDRLRQAEIPLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLLK 206 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + K + F E + Q Q ++ ++ F VS+ R P Sbjct: 207 KHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLAK 264 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GLID + ++V L Sbjct: 265 VATGEHWYGQQAIELGLIDAISTSDDVLMQL 295 >gi|317492188|ref|ZP_07950618.1| peptidase family S49 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919893|gb|EFV41222.1| peptidase family S49 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 348 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P +L K + ++ + K + E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFNRWLKKNDIDVELHTAGEFKRTLTLLGENTEQGREKFREELNETHA 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F VS+ R P ++ G W G +AK GL+D VG +++ Sbjct: 256 LFKSFVSQQR--PSLDIDSVATGEHWYGIQAKDKGLVDSVGTSDDL 299 >gi|261364052|ref|ZP_05976935.1| signal peptide peptidase SppA [Neisseria mucosa ATCC 25996] gi|288568087|gb|EFC89647.1| signal peptide peptidase SppA [Neisseria mucosa ATCC 25996] Length = 324 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 37 HVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H A I + G+I + + L + +E + +A +++ +SPGGS F I+ Sbjct: 75 HTAVITLEGEIGGGIDDQVKMLRDSMEAAYSNPNAKGIVIRANSPGGSPVISNTAFNEIR 134 Query: 92 KVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++K PV +M AS Y I+ A++ I A +S+VGSIGV+ V +DKL Sbjct: 135 RLKGEHKDIPVYVVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVIGGGFDVTGLMDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL-- 205 G+ + + K PF+ P+ ++ + ++ ++ F++ V R DK Sbjct: 195 GIKRRLKTAGSNKGMGDPFTPETPEQAKIWEAMLSDTHQEFIKAVKLGRGEKLKDKEYPD 254 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 V S GR++TG EAKKVGLID G Sbjct: 255 VFS-GRVYTGLEAKKVGLIDDFG 276 >gi|161870442|ref|YP_001599614.1| putative periplasmic protease [Neisseria meningitidis 053442] gi|161595995|gb|ABX73655.1| serine protease SohB [Neisseria meningitidis 053442] gi|316983835|gb|EFV62815.1| peptidase family S49 family protein [Neisseria meningitidis H44/76] gi|319410803|emb|CBY91190.1| putative peptidase [Neisseria meningitidis WUE 2594] gi|325140763|gb|EGC63277.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis CU385] gi|325199814|gb|ADY95269.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis H44/76] Length = 350 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+ V ++AAS GY+++C ++ I +A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIASAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGS+GV+ + P + L K + + + + K + E K Q + ++ ++ Sbjct: 199 IVGSVGVVAEVPNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQ 258 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + VSE+R P ++ G W G +A + LID Sbjct: 259 LFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLID 294 >gi|227326049|ref|ZP_03830073.1| putative periplasmic protease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 348 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRQGGVRLTVSVDKVAASGGYMMACVADRIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IVGSIGVVAQIPNFHRLLKNKDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHT 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +AK +GL+D +G +++ Sbjct: 256 LFKDFVQQMR--PSLDIDSVATGEHWFGTQAKDLGLVDAIGTSDDL 299 >gi|127513335|ref|YP_001094532.1| putative periplasmic protease [Shewanella loihica PV-4] gi|126638630|gb|ABO24273.1| Peptidase S49, N-terminal domain protein [Shewanella loihica PV-4] Length = 343 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAI 90 +P V I +G I D+ E+ E IS + ++V++ S GG + + Sbjct: 95 TPRVFVIDFKGSI-DAHEVASLREEISAILAIAEPGDEVVVNVESGGGMVHGYGLAASQL 153 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++++ + P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K Sbjct: 154 DRLRSAEIPLTICVDKVAASGGYMMACVANTIYAAPFAIVGSIGVVAQIPNFNRLLKKHD 213 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + K + F E + Q Q+ ++ ++ F +S+ R P ++ Sbjct: 214 IDYEQHTAGDFKRTLTLFGENTDEGRQKFQEELEETHVLFKAFISKYR--PTLDIAKVAT 271 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G W G +A +GL+D + ++V L Sbjct: 272 GEHWYGQQALDLGLVDGLSTSDDVVMKL 299 >gi|254507619|ref|ZP_05119752.1| peptidase S49 [Vibrio parahaemolyticus 16] gi|219549506|gb|EED26498.1| peptidase S49 [Vibrio parahaemolyticus 16] Length = 349 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 12/199 (6%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + +G I+ + E + I ++R+ +++ L S GG + + Sbjct: 101 PHLFVLDFKGSIDAKEVASLREEVTAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 158 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 159 DRIKAANLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVLKKYD 218 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 + + + + K + F E KA + + ++ ++ F + E R + DK ++ Sbjct: 219 IEYEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRERRPELELDK---VA 275 Query: 209 DGRIWTGAEAKKVGLIDVV 227 G W G +A +GL+D + Sbjct: 276 TGEHWFGTQAHDLGLVDEI 294 >gi|284007501|emb|CBA72986.1| probable protease [Arsenophonus nasoniae] Length = 348 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 3/171 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIV 122 D+ +++ L SPGG + + +++ + +I V ++AAS GY+++C ++ IV Sbjct: 131 DNKDEVLLRLESPGGVVHGYGLAASQLNRLREKGLKLIVSVDKVAASGGYMMACVADHIV 190 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AA +++GSIGV+ Q P L K + ++ + K + E + + + Sbjct: 191 AAPFAIIGSIGVVAQVPNFHRLLKKKDIDVELHTAGEYKRTLTLLGENTEQGRKKFVQDL 250 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + ++ F V + R P ++ G W G +AK+ GLID +G +++ Sbjct: 251 NEAHQLFKDFVHQKR--PALDINAVATGEHWYGVQAKEKGLIDEIGVSDDI 299 >gi|156975136|ref|YP_001446043.1| putative periplasmic protease [Vibrio harveyi ATCC BAA-1116] gi|156526730|gb|ABU71816.1| hypothetical protein VIBHAR_02863 [Vibrio harveyi ATCC BAA-1116] Length = 353 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E ++ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLRLESGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E KA + ++ ++ F +SE R P + ++ G Sbjct: 224 EYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFISERR--PALELEKVATG 281 Query: 211 RIWTGAEAKKVGLIDVV 227 W G +AK++GL+D + Sbjct: 282 EHWFGTQAKELGLVDEI 298 >gi|327253537|gb|EGE65170.1| minor capsid protein C domain protein [Escherichia coli STEC_7v] Length = 315 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|332993012|gb|AEF03067.1| putative inner membrane peptidase [Alteromonas sp. SN2] Length = 342 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + +Q++K + +T V ++AAS GY+++C ++ ++A++ + Sbjct: 131 VLVRLESGGGVVHGYGLAASQLQRIKEKGLTLTIAVDKVAASGGYMMACVADKLLASQFA 190 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +GSIGVL Q P L K V + + K + F E N + ++ ++ + Sbjct: 191 YIGSIGVLAQLPNFNKLLKKNDVEFEQHTAGEYKRTLTVFGENNDEGRAKFKEEIEEIHT 250 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V R P ++ G W G +AK++GL+D + Sbjct: 251 LFKDFVHSQR--PDMNIEKVATGEYWPGVKAKELGLVDAL 288 >gi|156393613|ref|XP_001636422.1| predicted protein [Nematostella vectensis] gi|156223525|gb|EDO44359.1| predicted protein [Nematostella vectensis] Length = 279 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 2/162 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAE 125 A+ + ++S GGS I+ I++ N K PV++ V + A S GY +S A + I Sbjct: 56 AVCLEINSTGGSPVQSNLIYTRIREQANDKKIPVLSFVEDHALSGGYWLSLAGDEIFVDP 115 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S VGSIG + V + KLG+ + V K +P + P+ V+ ++ ++ Sbjct: 116 NSAVGSIGAVSSNVGVVEAMKKLGLEYRPVVMGEHKVRMNPMEPLKPEDVEWVKKILAEV 175 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F+ LV E R + + G I+ G EA ++GL+D + Sbjct: 176 HNNFIDLVKERRTKLDTTSKTVFSGDIFLGKEAVRIGLVDAI 217 >gi|121595589|ref|YP_987485.1| peptidase S49 [Acidovorax sp. JS42] gi|120607669|gb|ABM43409.1| peptidase S49 [Acidovorax sp. JS42] Length = 347 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 7/202 (3%) Query: 34 NSPHVARIAIRGQI----EDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 ++PH A + ++G+I E S E + R + +D+ + A+++ ++SPGGS I Sbjct: 93 STPHTAVVDVKGEIAAGAEASAEFVVAAMRSAFEDAGSQAVVLLINSPGGSPVQAGIIND 152 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I ++K + KPV V E ASA Y I+ A++ I + S+VGSIGVL ++ Sbjct: 153 EIVRLKAKYNKPVYAVVEETCASAAYYIAAAADGIFVDKASIVGSIGVLMDGFGFTGAME 212 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS Q ++D + F+ +V + R T Sbjct: 213 KLGVERRLLTAGENKGFLDPFSPQTETQRAYAQAMLDQIHQQFIGVVKQGRGDRLKVTPE 272 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 G WTG +A ++GL D +G Sbjct: 273 TFSGLFWTGQQAVEMGLADQLG 294 >gi|291621953|emb|CAX64986.1| gp05 protein [Vibrio phage VP58.5] Length = 423 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 2/189 (1%) Query: 50 SQELIERIERISRDDSATALIV-SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S ELI + +D LIV S GG A + R I + +KPVI V+E Sbjct: 90 SYELIRHDYDTALNDPEVKLIVMEFDSGGGEAAGCFDLARHILSTRGKKPVIAFVNESCY 149 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y ++C + + ++ GSIGV+ + K+G+SI+ S KA+ SP Sbjct: 150 SAAYALACCCDQVYLTSSAGAGSIGVICGRLDQTEYNRKMGLSIELFVSGDYKADFSPHK 209 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ Q +Q ++ F LV+E+R + ++ L G +TG A GL D V Sbjct: 210 VLSDDERQRLQALIVQLGSEFHNLVAEARGMTAEQVKALKAG-CFTGRVAVDNGLADGVM 268 Query: 229 GQEEVWQSL 237 Q+E + L Sbjct: 269 SQDEFYNYL 277 >gi|307944694|ref|ZP_07660033.1| peptidase S49 [Roseibium sp. TrichSKD4] gi|307772121|gb|EFO31343.1| peptidase S49 [Roseibium sp. TrichSKD4] Length = 428 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 3/175 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASA 110 L+E +E A+++ + GG + E RA++ + KP+ ++E A SA Sbjct: 102 LLETVEEAVTHPGVKAVLLEIDCYGGPSQGLEDTARAMRDAAEQSGKPLWAHINEAALSA 161 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G+ I A++ I A T L GSIGV+ V +K GV K+ K + SPF+ + Sbjct: 162 GFGIGSAASEISIARTGLAGSIGVIAMVQDVSGAAEKSGVKYHVFKAGAAKDDASPFTAM 221 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + A +Q VD F ++V++ R + D L +I+ G +A GL+D Sbjct: 222 SEDAAARIQADVDGMNDDFCQMVADHRGMKKDAVAGLQ-AQIFRGEKAVAAGLVD 275 >gi|114764456|ref|ZP_01443681.1| peptidase, family S49 [Pelagibaca bermudensis HTCC2601] gi|114543023|gb|EAU46042.1| peptidase, family S49 [Roseovarius sp. HTCC2601] Length = 265 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 9/202 (4%) Query: 36 PHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P VA + ++G I Q L +ER R A+ + ++SPGGS I Sbjct: 12 PTVAVVRLQGAIGTGGRMALSDQSLRPLLERAFRKGKPVAVALEINSPGGSPVQSSLIGA 71 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ PV ++AAS GY I+ A++ I A +S++GSIGV+ FL Sbjct: 72 RIRRLSQECEVPVFAFTEDVAASGGYWIASAADEIHADPSSILGSIGVISAGFGAHVFLQ 131 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + G+ + + K+ PF N + V + ++ + F+ + + R Sbjct: 132 RQGIERRVHTAGRSKSMLDPFRPENEEDVARLNRLLGQLHETFIAQIKDRRGAKLADNPD 191 Query: 207 LSDGRIWTGAEAKKVGLIDVVG 228 L G +W G A +VGL D +G Sbjct: 192 LFTGEVWIGKAACEVGLADGIG 213 >gi|258626255|ref|ZP_05721102.1| sohB protein, peptidase U7 family [Vibrio mimicus VM603] gi|258581307|gb|EEW06209.1| sohB protein, peptidase U7 family [Vibrio mimicus VM603] Length = 356 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 108 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 166 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 167 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 226 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + + ++ ++ F + + R + DK ++ Sbjct: 227 EFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHRPALDLDK---VAT 283 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 284 GEHWFGTQAKTLGLVDEI 301 >gi|262171927|ref|ZP_06039605.1| SohB protein peptidase U7 family [Vibrio mimicus MB-451] gi|261893003|gb|EEY38989.1| SohB protein peptidase U7 family [Vibrio mimicus MB-451] Length = 353 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 105 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + + ++ ++ F + + R + DK ++ Sbjct: 224 EFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHRPALDLDK---VAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 281 GEHWFGTQAKTLGLVDEI 298 >gi|126174900|ref|YP_001051049.1| putative periplasmic protease [Shewanella baltica OS155] gi|125998105|gb|ABN62180.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella baltica OS155] Length = 338 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILAIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + Sbjct: 156 EIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + + Q Q+ ++ ++ F V + R P + ++ G W G Sbjct: 216 TAGNFKRTLTVFGENSDEGRQKFQEELEETHILFKAFVGKYR--PELDLVKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA 239 +A ++GL+D + ++V SL A Sbjct: 274 QQAIELGLVDAISTSDDVIMSLAA 297 >gi|323942023|gb|EGB38201.1| peptidase S49 [Escherichia coli E482] Length = 362 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|260773130|ref|ZP_05882046.1| SohB protein peptidase U7 family [Vibrio metschnikovii CIP 69.14] gi|260612269|gb|EEX37472.1| SohB protein peptidase U7 family [Vibrio metschnikovii CIP 69.14] Length = 331 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L + GG + + ++K + P+ V ++AAS GY+++C ++ IVAA + Sbjct: 119 VLVRLETGGGMVHGYGLASSQLDRLKAAQLPLTIAVDKVAASGGYMMACIADKIVAAPFA 178 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + + + + + K + F E KA + + ++ ++ Sbjct: 179 IVGSIGVIAQIPNFHKLLKRNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHG 238 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + + R + DK ++ G W G++AK +GL+D + +++ Sbjct: 239 LFKDFIRDHRPALDLDK---VATGEHWFGSQAKALGLVDEIATSDDL 282 >gi|260767896|ref|ZP_05876830.1| SohB protein peptidase U7 family [Vibrio furnissii CIP 102972] gi|260615926|gb|EEX41111.1| SohB protein peptidase U7 family [Vibrio furnissii CIP 102972] gi|315179599|gb|ADT86513.1| sohB protein, peptidase U7 family protein [Vibrio furnissii NCTC 11218] Length = 353 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E ++ +++ L + GG + + Sbjct: 105 PHLFVLDFHGSI-DAKEVTSLREEVTAILAVAQQGDEVLLRLETGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFNKLLKKHDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E + KA + ++ ++ ++ F + E R ++ +K ++ Sbjct: 224 EFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHVLFKDFIREHRPDLDLEK---VAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 281 GEHWFGTQAKALGLVDEI 298 >gi|304411918|ref|ZP_07393529.1| Peptidase S49 domain protein [Shewanella baltica OS183] gi|307303314|ref|ZP_07583069.1| Peptidase S49 domain protein [Shewanella baltica BA175] gi|304349778|gb|EFM14185.1| Peptidase S49 domain protein [Shewanella baltica OS183] gi|306913674|gb|EFN44096.1| Peptidase S49 domain protein [Shewanella baltica BA175] Length = 338 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILAIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + Sbjct: 156 EIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + + Q Q+ ++ ++ F V + R P + ++ G W G Sbjct: 216 TAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLVKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA 239 +A ++GL+D + ++V SL A Sbjct: 274 QQAIELGLVDAISTSDDVIMSLAA 297 >gi|262165297|ref|ZP_06033034.1| SohB protein peptidase U7 family [Vibrio mimicus VM223] gi|262025013|gb|EEY43681.1| SohB protein peptidase U7 family [Vibrio mimicus VM223] Length = 353 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 105 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAKAGDEVLLRLETGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + + ++ ++ F + + R + DK ++ Sbjct: 224 EFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHRPALDLDK---VAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 281 GEHWFGTQAKTLGLVDEI 298 >gi|327394039|dbj|BAK11461.1| predicted protease SohB [Pantoea ananatis AJ13355] Length = 348 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 88/167 (52%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGMVHGYGLAASQLQRLRDAGLTLTAAVDKVAASGGYMMACVASQIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + Q ++ ++ Sbjct: 196 VIGSIGVVAQIPNFNRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQQDLNETHL 255 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V E R ++ D+ ++ G W G +A +GLID + +++ Sbjct: 256 LFKQFVHEMRPSLDIDR---VATGEHWYGRQALTLGLIDRISTSDDL 299 >gi|117620350|ref|YP_857606.1| putative periplasmic protease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561757|gb|ABK38705.1| peptidase, S49 (protease IV) family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 335 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 85/159 (53%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + +Q++++R +T + ++AAS GY+++C ++ I+AA + Sbjct: 125 VLLRLESGGGVVHGYGLAASQLQRLRDRDIKLTVAIDKVAASGGYMMACVADQILAAPFA 184 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E + + + ++ + + + Sbjct: 185 IVGSIGVIAQLPNFNKLLKKHDIEFEMHTAGQYKRTITMFGENDEQGREKFREELGAIHE 244 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+E R N+ D ++ G W ++AK++GL+D Sbjct: 245 RFKAFVAEHRPNLDIDS---VTTGEHWLASQAKQLGLVD 280 >gi|160875901|ref|YP_001555217.1| putative periplasmic protease [Shewanella baltica OS195] gi|160861423|gb|ABX49957.1| Peptidase S49 domain protein [Shewanella baltica OS195] gi|315268092|gb|ADT94945.1| Peptidase S49 domain protein [Shewanella baltica OS678] Length = 338 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILAIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + Sbjct: 156 DIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + + Q Q+ ++ ++ F V + R P + ++ G W G Sbjct: 216 TAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLVKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA 239 +A ++GL+D + ++V SL A Sbjct: 274 QQAIELGLVDAISTSDDVIMSLAA 297 >gi|90415994|ref|ZP_01223927.1| probable protease [marine gamma proteobacterium HTCC2207] gi|90332368|gb|EAS47565.1| probable protease [marine gamma proteobacterium HTCC2207] Length = 363 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 +S+ + ++V L S GG ++ + +++ R P+ V ++AAS GY+++C + Sbjct: 139 LSQASANDEVVVRLESGGGMVHSYGLASSQLDRIRKRNIPLTVCVDKVAASGGYMMACVA 198 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+AA +++GSIGV+ Q P L K V + + + K + F E + Sbjct: 199 DKIIAAPFAILGSIGVVAQLPNFNKVLKKHDVEFELLTAGEHKRTLTMFGENTDSGREKF 258 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ ++ F V E R P +++ G +W G A V L+D Sbjct: 259 LEELEDTHSLFKEFVQERR--PQLDIDLIATGEVWFGTRALNVALVD 303 >gi|291617611|ref|YP_003520353.1| SohB [Pantoea ananatis LMG 20103] gi|291152641|gb|ADD77225.1| SohB [Pantoea ananatis LMG 20103] Length = 348 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 88/167 (52%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGMVHGYGLAASQLQRLRDAGLTLTAAVDKVAASGGYMMACVASQIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + Q ++ ++ Sbjct: 196 VIGSIGVVAQIPNFNRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQQDLNETHL 255 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V E R ++ D+ ++ G W G +A +GLID + +++ Sbjct: 256 LFKQFVHEMRPSLDIDR---VATGEHWYGRQALTLGLIDRISTSDDL 299 >gi|307545278|ref|YP_003897757.1| inner membrane peptidase [Halomonas elongata DSM 2581] gi|307217302|emb|CBV42572.1| predicted inner membrane peptidase [Halomonas elongata DSM 2581] Length = 343 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 3/164 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG +A G A + + V ++AAS GYL++C ++ + AA + Sbjct: 128 VVVRLESAGGLVHAYGHAAAEMDRLRQAGLSTTVCVDKVAASGGYLMACCADRLRAAPFA 187 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L + + ++ + + K + F E + Q +D+ + Sbjct: 188 VLGSIGVVAQLPNVHRLLKRHDIDVEVLTAGHYKRTLTVFGENTEEGRQKFLAELDTVHD 247 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 F R V+E R P ++ G W G EA GLID +G E Sbjct: 248 LFKRYVAERR--PGLDIEAVATGEAWHGTEALPRGLIDEIGTSE 289 >gi|146340583|ref|YP_001205631.1| hypothetical protein BRADO3628 [Bradyrhizobium sp. ORS278] gi|146193389|emb|CAL77405.1| conserved hypothetical protein; putative peptidase S49 domain [Bradyrhizobium sp. ORS278] Length = 289 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 3/173 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++I+ + SPGG+ A+ + RKP + V+ +AASA Y I+ ++ IV ++ Sbjct: 97 SIILDVDSPGGTVAGTAEAAAAVAEAAQRKPCVACVNTLAASAAYWIASQASEIVMTPSA 156 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 VGSIG + + L+ G+++ ++S SP K E PF ++ +A +Q V+ + Sbjct: 157 DVGSIGAMVMHVDYSKALEDAGITVTMIRSEQSPKKNEAHPFGPLSDEARANLQSRVNDA 216 Query: 186 YHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F+R V+ R + K GR++ EA G++D + +E+ L Sbjct: 217 GADFIRAVASGRRVTQSKVKEDFGQGRMFGAREAVARGMVDRISTFDELVSRL 269 >gi|260899603|ref|ZP_05907998.1| putative protease SohB [Vibrio parahaemolyticus AQ4037] gi|308106905|gb|EFO44445.1| putative protease SohB [Vibrio parahaemolyticus AQ4037] Length = 345 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 10/196 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVGSLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + ++ ++ F + E R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVAT 280 Query: 210 GRIWTGAEAKKVGLID 225 G W G +AK++GL+D Sbjct: 281 GEHWFGTQAKELGLVD 296 >gi|262402596|ref|ZP_06079157.1| SohB protein peptidase U7 family [Vibrio sp. RC586] gi|262351378|gb|EEZ00511.1| SohB protein peptidase U7 family [Vibrio sp. RC586] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 105 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKEAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + ++ ++ F + + R + DK ++ Sbjct: 224 EFEQLTAGEYKRTLTMFGENTDKARDKFKLELEETHQLFKDFIRDHRPALDLDK---VAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 281 GEHWFGTQAKTLGLVDEI 298 >gi|239993633|ref|ZP_04714157.1| putative periplasmic protease [Alteromonas macleodii ATCC 27126] Length = 348 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + +Q++K + +T V ++AAS GY+++C ++ ++A++ + Sbjct: 137 VLVRLESGGGVVHGYGLAASQLQRIKEKGLKLTIAVDKVAASGGYMMACVADKLLASQFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +GSIGVL Q P L K + + + K + F E N + ++ ++ + Sbjct: 197 YIGSIGVLAQLPNFNKLLKKNDIEFEQHTAGEFKRTLTVFGENNDEGRAKFKEEIEEIHI 256 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V R ++ DK ++ G W G +AK +GLID Sbjct: 257 LFKDFVQSQRPDMDIDK---VATGEYWPGIKAKSLGLID 292 >gi|183599262|ref|ZP_02960755.1| hypothetical protein PROSTU_02723 [Providencia stuartii ATCC 25827] gi|188021494|gb|EDU59534.1| hypothetical protein PROSTU_02723 [Providencia stuartii ATCC 25827] Length = 348 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + P+ V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGMVHGYGLAASQLSRLKEKNIPLTIAVDKVAASGGYMMACIASKIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + L K V ++ + K + E + + + ++ ++ Sbjct: 196 IIGSIGVVAQVPNIHRLLKKHDVDVELHTAGEYKRTLTMLGENTEQGRKKFIEDLNETHE 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + V +R P ++ G W G +A GLID +G +++ Sbjct: 256 LFKQFVHHNR--PSLDIDAVATGEYWYGTQALDKGLIDQIGVSDDI 299 >gi|52425201|ref|YP_088338.1| putative periplasmic protease [Mannheimia succiniciproducens MBEL55E] gi|52307253|gb|AAU37753.1| SppA protein [Mannheimia succiniciproducens MBEL55E] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 9/186 (4%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IVAA + Sbjct: 141 VLLRLESPGGVVHGYGLAASQLARLKQKGIKLTVAVDKVAASGGYMMACVADKIVAAPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + L K V + + + K + E K Q Q ++ ++ Sbjct: 201 VIGSIGVVAQVPNIHRLLKKHDVDVDVMTAGEYKRTVTFVGENTEKGKQKFQQELEETHD 260 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV----WQSLYALGV 242 F + V+ +R + DK ++ G W G +A + L+D + +++ Q +GV Sbjct: 261 LFKQFVTANRPLVDIDK---IATGEHWFGQQALALNLVDEIATSDDLILDAMQDKSVIGV 317 Query: 243 DQSIRK 248 +++K Sbjct: 318 KYAVKK 323 >gi|323947947|gb|EGB43942.1| peptidase S49 [Escherichia coli H120] Length = 354 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|324009542|gb|EGB78761.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2] Length = 430 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAVLEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|325497454|gb|EGC95313.1| periplasmic protease [Escherichia fergusonii ECD227] Length = 349 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVVRLESPGGVVHGYGLAASQLQRLRDHNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQLPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHL 256 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R ++ D+ ++ G W G +A + GL+D + ++V Sbjct: 257 LFKDFVKRMRPSLDIDQ---VATGEHWYGQQALEKGLVDEINTSDDV 300 >gi|126734017|ref|ZP_01749764.1| peptidase, family S49, putative [Roseobacter sp. CCS2] gi|126716883|gb|EBA13747.1| peptidase, family S49, putative [Roseobacter sp. CCS2] Length = 264 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 8/203 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIER------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + P VA I ++G I +S ++ IE+ A+ + ++ PGGS I Sbjct: 10 SEPFVAVIRLQGAIANSGRGLDNPGLAPVIEKAFSKGKPAAVALEINCPGGSPVQSSLIA 69 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K PV V ++AAS GY ++CA++ I S+ GSIGV+ + Sbjct: 70 SRIRRLADEKKIPVFAFVEDVAASGGYWLACAADEIFIDSCSITGSIGVISAGFGATEAI 129 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DK+GV + + K+ PF P V+ ++ ++ + F+ V R Sbjct: 130 DKIGVERRVHTAGKSKSMMDPFKPEKPADVKKLKGWLEDLHATFIDYVKSRRGTKLSDNP 189 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 L G ++ G + GL D +G Sbjct: 190 DLFTGEVYIGQKGIDEGLADGIG 212 >gi|156358147|ref|XP_001624386.1| predicted protein [Nematostella vectensis] gi|156211161|gb|EDO32286.1| predicted protein [Nematostella vectensis] Length = 445 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 2/162 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAE 125 A+ + ++S GGS I+ I++ N K PV++ V + A S GY +S A + I Sbjct: 222 AVCLEINSTGGSPVQSNLIYTRIREQANDKKIPVLSFVEDHALSGGYWLSLAGDEIFVDP 281 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S VGSIG + V + KLG+ + V K +P + P+ V+ ++ ++ Sbjct: 282 NSAVGSIGAVSSNVGVVEAMKKLGLEYRPVVMGEHKVRMNPMEPLKPEDVEWVKKILAEV 341 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F+ LV E R + + G I+ G EA ++GL+D + Sbjct: 342 HNNFIDLVKERRTKLDTTSKTVFSGDIFLGKEAVRIGLVDAI 383 >gi|28898806|ref|NP_798411.1| putative periplasmic protease [Vibrio parahaemolyticus RIMD 2210633] gi|28807025|dbj|BAC60295.1| sohB protein, peptidase U7 family [Vibrio parahaemolyticus RIMD 2210633] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 10/196 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVGSLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + ++ ++ F + E R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVAT 280 Query: 210 GRIWTGAEAKKVGLID 225 G W G +AK++GL+D Sbjct: 281 GEHWFGTQAKELGLVD 296 >gi|328474635|gb|EGF45440.1| putative inner membrane peptidase [Vibrio parahaemolyticus 10329] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 10/196 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVASLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + ++ ++ F + E R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVAT 280 Query: 210 GRIWTGAEAKKVGLID 225 G W G +AK++GL+D Sbjct: 281 GEHWFGTQAKELGLVD 296 >gi|319776073|ref|YP_004138561.1| inner membrane peptidase [Haemophilus influenzae F3047] gi|319896882|ref|YP_004135077.1| inner membrane peptidase [Haemophilus influenzae F3031] gi|329123236|ref|ZP_08251804.1| protease SohB [Haemophilus aegyptius ATCC 11116] gi|317432386|emb|CBY80741.1| predicted inner membrane peptidase [Haemophilus influenzae F3031] gi|317450664|emb|CBY86884.1| predicted inner membrane peptidase [Haemophilus influenzae F3047] gi|327471445|gb|EGF16893.1| protease SohB [Haemophilus aegyptius ATCC 11116] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+ Sbjct: 136 SEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVS 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P V L K V + + + K + E K Q Q ++ Sbjct: 196 APFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F + VS++R + DK ++ G W G +A + L+D + Sbjct: 256 ETHKLFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|148980525|ref|ZP_01816098.1| predicted inner membrane peptidase [Vibrionales bacterium SWAT-3] gi|145961178|gb|EDK26493.1| predicted inner membrane peptidase [Vibrionales bacterium SWAT-3] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E ++ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLKKHDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E + KA + ++ ++ ++ F + + R + DK ++ Sbjct: 224 EFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHRPALDLDK---VAT 280 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +A ++GL+D + Sbjct: 281 GEHWFGTQAHELGLVDEI 298 >gi|306813973|ref|ZP_07448146.1| Minor capsid protein C from bacteriophage origin [Escherichia coli NC101] gi|222032926|emb|CAP75666.1| capsid protein of prophage [Escherichia coli LF82] gi|305852610|gb|EFM53058.1| Minor capsid protein C from bacteriophage origin [Escherichia coli NC101] gi|312945741|gb|ADR26568.1| Minor capsid protein C from bacteriophage origin [Escherichia coli O83:H1 str. NRG 857C] Length = 443 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAVLEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|301170437|emb|CBW30044.1| predicted inner membrane peptidase [Haemophilus influenzae 10810] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+ Sbjct: 136 SEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVS 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P V L K V + + + K + E K Q Q ++ Sbjct: 196 APFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F + VS++R + DK ++ G W G +A + L+D + Sbjct: 256 ETHKLFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|229847303|ref|ZP_04467405.1| putative periplasmic protease [Haemophilus influenzae 7P49H1] gi|229809728|gb|EEP45452.1| putative periplasmic protease [Haemophilus influenzae 7P49H1] Length = 353 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+ Sbjct: 136 SEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVS 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P V L K V + + + K + E K Q Q ++ Sbjct: 196 APFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F + VS++R + DK ++ G W G +A + L+D + Sbjct: 256 ETHKLFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|153001229|ref|YP_001366910.1| putative periplasmic protease [Shewanella baltica OS185] gi|151365847|gb|ABS08847.1| Peptidase S49 domain protein [Shewanella baltica OS185] Length = 338 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 8/204 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILAIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + Sbjct: 156 DIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + + Q Q+ ++ ++ F V + R P + ++ G W G Sbjct: 216 TAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLVKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA 239 +A ++GL+D + ++V SL A Sbjct: 274 QQAIELGLVDAISTSDDVIMSLAA 297 >gi|218699885|ref|YP_002407514.1| minor capsid protein C from bacteriophage origin [Escherichia coli IAI39] gi|218369871|emb|CAR17645.1| Minor capsid protein C from bacteriophage origin [Escherichia coli IAI39] Length = 488 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|33770512|ref|NP_892049.1| capsid protein [Yersinia phage PY54] gi|33636095|emb|CAD91764.1| capsid protein [Yersinia phage PY54] Length = 303 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 8/189 (4%) Query: 44 RGQIEDSQELIERIERIS-------RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RGQI + + ERI D S + +++ + GG+ + + I ++ Sbjct: 78 RGQITQACTELTSYERIRAQFTKALNDPSVSEIVLDFYTGGGAVSGCKELADYIFASRSV 137 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP V+ A SAGY ++ A + IV + TS VGSIGV+ ++ +++G+ + Sbjct: 138 KPSTAIVNYNAFSAGYFMASACSRIVVSHTSGVGSIGVILEHMEASKLEEQIGLKFTTFY 197 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K SP + +A +Q ++D +Y F V+E R I + ++ + R + G Sbjct: 198 RGDFKNAGSPHEPLTDEATAYLQQLIDDAYETFTTSVAEYRGIDVQR-VIDTQARTFFGQ 256 Query: 217 EAKKVGLID 225 A GL D Sbjct: 257 AAVDAGLAD 265 >gi|331651533|ref|ZP_08352553.1| minor capsid protein C (GPC) [Escherichia coli M718] gi|331050806|gb|EGI22863.1| minor capsid protein C (GPC) [Escherichia coli M718] Length = 484 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|16273569|ref|NP_439824.1| putative periplasmic protease [Haemophilus influenzae Rd KW20] gi|260581275|ref|ZP_05849093.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1174392|sp|P45315|SOHB_HAEIN RecName: Full=Probable protease sohB gi|1574534|gb|AAC23328.1| protease, putative (sohB) [Haemophilus influenzae Rd KW20] gi|260092102|gb|EEW76047.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 353 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+ Sbjct: 136 SEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVS 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P V L K V + + + K + E K Q Q ++ Sbjct: 196 APFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F + VS++R + DK ++ G W G +A + L+D + Sbjct: 256 ETHKLFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|260582614|ref|ZP_05850403.1| periplasmic serine protease [Haemophilus influenzae NT127] gi|260094286|gb|EEW78185.1| periplasmic serine protease [Haemophilus influenzae NT127] Length = 353 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+ Sbjct: 136 SEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVS 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P V L K V + + + K + E K Q Q ++ Sbjct: 196 APFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F + VS++R + DK ++ G W G +A + L+D + Sbjct: 256 ETHKLFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|145637711|ref|ZP_01793364.1| predicted inner membrane peptidase [Haemophilus influenzae PittHH] gi|145269113|gb|EDK09063.1| predicted inner membrane peptidase [Haemophilus influenzae PittHH] Length = 323 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+ Sbjct: 136 SEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVS 195 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P V L K V + + + K + E K Q Q ++ Sbjct: 196 APFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELE 255 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ F + VS++R + DK ++ G W G +A + L+D + Sbjct: 256 ETHKLFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|26249012|ref|NP_755052.1| putative capsid protein of prophage [Escherichia coli CFT073] gi|26109419|gb|AAN81622.1|AE016765_24 Putative capsid protein of prophage [Escherichia coli CFT073] Length = 477 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 148 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 207 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 208 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 267 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 268 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 319 >gi|218549037|ref|YP_002382828.1| periplasmic protease [Escherichia fergusonii ATCC 35469] gi|218356578|emb|CAQ89201.1| putative inner membrane peptidase [Escherichia fergusonii ATCC 35469] Length = 349 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVVRLESPGGVVHGYGLAASQLQRLRDHNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQLPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHL 256 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R ++ D+ ++ G W G +A + GL+D + ++V Sbjct: 257 LFKDFVKRMRPSLDIDQ---VATGEHWYGQQALEKGLVDEINTSDDV 300 >gi|324113144|gb|EGC07119.1| peptidase S49 [Escherichia fergusonii B253] Length = 349 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 5/167 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + +Q++++ P+ V ++AAS GY+++C ++ IV+A + Sbjct: 137 VVVRLESPGGVVHGYGLAASQLQRLRDHNIPLTVTVDKVAASGGYMMACVADKIVSAPFA 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P FL + I+ + K + E + + ++ ++ ++ Sbjct: 197 IVGSIGVVAQLPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHL 256 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V R ++ D+ ++ G W G +A + GL+D + ++V Sbjct: 257 LFKDFVKRMRPSLDIDQ---VATGEHWYGQQALEKGLVDEINTSDDV 300 >gi|161831162|ref|YP_001596297.1| putative periplasmic protease [Coxiella burnetii RSA 331] gi|161763029|gb|ABX78671.1| peptidase, S49 (protease IV) family [Coxiella burnetii RSA 331] Length = 338 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 90/177 (50%), Gaps = 8/177 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAAS 109 +E+ + +RDD +++ L S GG + +Q++K+ ++ + ++AAS Sbjct: 118 EEITAVLTTATRDDQ---VLLRLESGGGVVHGYGLAASQLQRIKDAHIKLVIAIDKVAAS 174 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GYL++C ++ I+AA ++VGSIGVL Q P +L K + + V + K + F E Sbjct: 175 GGYLMACVADRIIAAPFAIVGSIGVLAQLPNFHRYLRKKYIDFEQVMAGDYKRTLTLFGE 234 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 K M++ V+ ++ F + E R + ++ ++ G W ++A + L+D Sbjct: 235 NTEKGRAKMKEEVEETHTLFKSFIKEHRQEVDVEQ---IATGEHWYASKALDLRLVD 288 >gi|217972851|ref|YP_002357602.1| putative periplasmic protease [Shewanella baltica OS223] gi|217497986|gb|ACK46179.1| Peptidase S49 domain protein [Shewanella baltica OS223] Length = 330 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 3/172 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V++ S GG + + +++ P+ V ++AAS GY+++C +N I AA + Sbjct: 120 VVVNVESGGGMVHGYGLASSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKIYAAPFA 179 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E + + Q Q+ ++ ++ Sbjct: 180 IVGSIGVVAQLPNFNRLLKKHEIDYEQHTAGNFKRTLTVFGENSDEGRQKFQEELEETHV 239 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 F V + R P + ++ G W G +A ++GL+D + ++V SL A Sbjct: 240 LFKAFVGKYR--PELDLVKVATGEHWYGQQAIELGLVDAISTSDDVIMSLAA 289 >gi|188533754|ref|YP_001907551.1| putative periplasmic protease [Erwinia tasmaniensis Et1/99] gi|188028796|emb|CAO96658.1| Peptidase family U7 protein [Erwinia tasmaniensis Et1/99] Length = 349 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++++ +T V ++AAS GY+++C ++ IVAA S Sbjct: 137 VLLRLESPGGVVHGYGLAASQLQRLRDKGITLTVAVDKVAASGGYMMACVADRIVAAPFS 196 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + ++ ++ ++ Sbjct: 197 IIGSIGVVAQIPNFNRLLKRNEIDVEMHTAGEYKRTLTLFGENTEQGREKFREDLNETHL 256 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + V + R P ++ G W G +A + GL+D + Sbjct: 257 LFKQFVHQMR--PALDIDSVATGEHWYGTQALEKGLVDAI 294 >gi|29653702|ref|NP_819394.1| putative periplasmic protease [Coxiella burnetii RSA 493] gi|153207278|ref|ZP_01946042.1| peptidase, S49 (protease IV) family [Coxiella burnetii 'MSU Goat Q177'] gi|154707075|ref|YP_001425059.1| putative periplasmic protease [Coxiella burnetii Dugway 5J108-111] gi|165918692|ref|ZP_02218778.1| peptidase, S49 (protease IV) family [Coxiella burnetii RSA 334] gi|212218185|ref|YP_002304972.1| putative periplasmic protease [Coxiella burnetii CbuK_Q154] gi|29540965|gb|AAO89908.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii RSA 493] gi|120576766|gb|EAX33390.1| peptidase, S49 (protease IV) family [Coxiella burnetii 'MSU Goat Q177'] gi|154356361|gb|ABS77823.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii Dugway 5J108-111] gi|165917627|gb|EDR36231.1| peptidase, S49 (protease IV) family [Coxiella burnetii RSA 334] gi|212012447|gb|ACJ19827.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii CbuK_Q154] Length = 338 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 90/177 (50%), Gaps = 8/177 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAAS 109 +E+ + +RDD +++ L S GG + +Q++K+ ++ + ++AAS Sbjct: 118 EEITAVLTTATRDDE---VLLRLESGGGVVHGYGLAASQLQRIKDAHIKLVIAIDKVAAS 174 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GYL++C ++ I+AA ++VGSIGVL Q P +L K + + V + K + F E Sbjct: 175 GGYLMACVADRIIAAPFAIVGSIGVLAQLPNFHRYLRKKYIDFEQVMAGDYKRTLTLFGE 234 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 K M++ V+ ++ F + E R + ++ ++ G W ++A + L+D Sbjct: 235 NTEKGRAKMKEEVEETHTLFKSFIKEHRQEVDVEQ---IATGEHWYASKALDLRLVD 288 >gi|126667357|ref|ZP_01738329.1| predicted inner membrane peptidase [Marinobacter sp. ELB17] gi|126628113|gb|EAZ98738.1| predicted inner membrane peptidase [Marinobacter sp. ELB17] Length = 362 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG ++ + +++ + +T V ++AAS GY+++C ++ IVA+ + Sbjct: 149 VVVRLESGGGMVHSYGLAAAQLDRIRAKGLNLTVCVDKVAASGGYMMACVADRIVASPFA 208 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + F E K Q ++ + Sbjct: 209 ILGSIGVVAQLPNVHRLLKKNNVDFEVLTAGEHKRTLTVFGENTDKGRQKFLADLEDIHQ 268 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V E R P +++G IW G A V LIDV+ +E Sbjct: 269 LFKDYVGERR--PQLDMAAVANGDIWFGRRALDVKLIDVIQTSDE 311 >gi|218554104|ref|YP_002387017.1| Minor capsid protein C from bacteriophage origin [Escherichia coli IAI1] gi|218360872|emb|CAQ98442.2| Minor capsid protein C from bacteriophage origin [Escherichia coli IAI1] Length = 484 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|300897573|ref|ZP_07115983.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|300358676|gb|EFJ74546.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] Length = 403 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|323185917|gb|EFZ71274.1| minor capsid protein C [Escherichia coli 1357] Length = 419 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 90 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 149 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 150 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 209 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 210 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 261 >gi|307310890|ref|ZP_07590536.1| peptidase S49 [Escherichia coli W] gi|306909068|gb|EFN39564.1| peptidase S49 [Escherichia coli W] gi|315060844|gb|ADT75171.1| peptidase S49 [Escherichia coli W] gi|323378587|gb|ADX50855.1| peptidase S49 [Escherichia coli KO11] Length = 439 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|323963682|gb|EGB59198.1| peptidase S49 [Escherichia coli M863] Length = 439 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|293403702|ref|ZP_06647790.1| head protein [Escherichia coli FVEC1412] gi|298383397|ref|ZP_06992983.1| minor capsid protein C bacteriophage origin [Escherichia coli FVEC1302] gi|291429117|gb|EFF02140.1| head protein [Escherichia coli FVEC1412] gi|298276193|gb|EFI17720.1| minor capsid protein C bacteriophage origin [Escherichia coli FVEC1302] Length = 472 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 143 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 202 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 203 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 262 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 263 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 314 >gi|212702705|ref|ZP_03310833.1| hypothetical protein DESPIG_00733 [Desulfovibrio piger ATCC 29098] gi|212673865|gb|EEB34348.1| hypothetical protein DESPIG_00733 [Desulfovibrio piger ATCC 29098] Length = 401 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 14/201 (6%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 ++ +D+ +++S +SPGG A + + I + + KPV + ASA Y ++ Sbjct: 76 LDEARQDERVRGILLSFNSPGGVAAGVKELADYIASIDD-KPVAAYADGLTASAAYWLAS 134 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A+ + A + VGS+GV+ + + FLDK+GVSI + S K +P ++ P+ Sbjct: 135 ATGRVYAPAMAQVGSVGVISEVRNISGFLDKMGVSITYIASGKWKTAGNPVEKLTPEQTA 194 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q+ VD+ + F V++ I D ++ +I A+++GL+ + E Sbjct: 195 YFQERVDALHTVFKADVAQHMGISQDP--AWTEAQILFAQSAQQLGLVTAIVRDE----- 247 Query: 237 LYALGVDQSIRKIKDWNPPKN 257 DQ+I ++ + P N Sbjct: 248 ------DQAINRLLEVTMPDN 262 >gi|317048300|ref|YP_004115948.1| peptidase S49 domain-containing protein [Pantoea sp. At-9b] gi|316949917|gb|ADU69392.1| Peptidase S49 domain protein [Pantoea sp. At-9b] Length = 348 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++ +T V ++AAS GY+++C ++ IVAA S Sbjct: 136 VLLKLESPGGVVHGYGLAASQLQRLRDAGLTLTAAVDKVAASGGYMMACVADRIVAAPFS 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFNRLLKRNDIDVELHTAGQYKRTLTLFGENTDEGREKFREDLNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F V + R P ++ G W G +A ++GL+D +G Sbjct: 256 LFKDFVHQMR--PTLDVEKVATGEHWYGRQALELGLVDEIG 294 >gi|331676489|ref|ZP_08377186.1| minor capsid protein C (GPC) [Escherichia coli H591] gi|331075982|gb|EGI47279.1| minor capsid protein C (GPC) [Escherichia coli H591] Length = 484 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|312969556|ref|ZP_07783739.1| minor capsid C [Escherichia coli 1827-70] gi|310337841|gb|EFQ02930.1| minor capsid C [Escherichia coli 1827-70] Length = 439 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|331646437|ref|ZP_08347540.1| minor capsid protein C (GPC) [Escherichia coli M605] gi|331045189|gb|EGI17316.1| minor capsid protein C (GPC) [Escherichia coli M605] Length = 484 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|320198084|gb|EFW72692.1| Head-tail preconnector protein GP5 [Escherichia coli EC4100B] Length = 439 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|145631466|ref|ZP_01787235.1| predicted inner membrane peptidase [Haemophilus influenzae R3021] gi|144982896|gb|EDJ90409.1| predicted inner membrane peptidase [Haemophilus influenzae R3021] Length = 353 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + E K Q Q ++ ++ Sbjct: 200 VIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHK 259 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS++R + DK ++ G W G +A + L+D + Sbjct: 260 LFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|68250286|ref|YP_249398.1| putative periplasmic protease [Haemophilus influenzae 86-028NP] gi|148825774|ref|YP_001290527.1| putative periplasmic protease [Haemophilus influenzae PittEE] gi|229845217|ref|ZP_04465350.1| putative periplasmic protease [Haemophilus influenzae 6P18H1] gi|68058485|gb|AAX88738.1| possible protease SohB [Haemophilus influenzae 86-028NP] gi|148715934|gb|ABQ98144.1| predicted inner membrane peptidase [Haemophilus influenzae PittEE] gi|229811812|gb|EEP47508.1| putative periplasmic protease [Haemophilus influenzae 6P18H1] gi|309972922|gb|ADO96123.1| Probable protease SohB [Haemophilus influenzae R2846] Length = 353 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + E K Q Q ++ ++ Sbjct: 200 VIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHK 259 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS++R + DK ++ G W G +A + L+D + Sbjct: 260 LFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|87121325|ref|ZP_01077215.1| peptidase, U7 family protein [Marinomonas sp. MED121] gi|86163482|gb|EAQ64757.1| peptidase, U7 family protein [Marinomonas sp. MED121] Length = 348 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 6/168 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASN 119 S DD ++V L S GG + +Q++K+ P+ V ++AAS GY+++C ++ Sbjct: 130 SADDE---VVVRLESGGGVVHGYGLAASQLQRIKDANLPLTICVDKVAASGGYMMACVAD 186 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I+AA +++GSIGV+ Q P + LDK V ++ + K + E + + + Sbjct: 187 KIIAAPFAILGSIGVVAQVPNIHRLLDKSLVDVELHTAGKYKRTLTMLGENTDEGREKFK 246 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ ++ F VS +R P ++ G +W G++A K L+D V Sbjct: 247 QDLEDTHVLFKEFVSSAR--PVIDIEAIATGDVWYGSQALKNNLVDQV 292 >gi|145629227|ref|ZP_01785026.1| predicted inner membrane peptidase [Haemophilus influenzae 22.1-21] gi|145639162|ref|ZP_01794769.1| predicted inner membrane peptidase [Haemophilus influenzae PittII] gi|144978730|gb|EDJ88453.1| predicted inner membrane peptidase [Haemophilus influenzae 22.1-21] gi|145271724|gb|EDK11634.1| predicted inner membrane peptidase [Haemophilus influenzae PittII] gi|309750742|gb|ADO80726.1| Probable protease SohB [Haemophilus influenzae R2866] Length = 353 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + E K Q Q ++ ++ Sbjct: 200 VIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHK 259 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS++R + DK ++ G W G +A + L+D + Sbjct: 260 LFKQFVSQNRPCLDIDK---IATGEHWFGQQAFALQLVDEI 297 >gi|145641066|ref|ZP_01796647.1| predicted inner membrane peptidase [Haemophilus influenzae R3021] gi|145274227|gb|EDK14092.1| predicted inner membrane peptidase [Haemophilus influenzae 22.4-21] Length = 323 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + E K Q Q ++ ++ Sbjct: 200 VIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHK 259 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS++R + DK ++ G W G +A + L+D + Sbjct: 260 LFKQFVSQNRPCLDIDK---IATGEHWFGQQAFALQLVDEI 297 >gi|331672678|ref|ZP_08373467.1| minor capsid protein C (GPC) [Escherichia coli TA280] gi|331070321|gb|EGI41687.1| minor capsid protein C (GPC) [Escherichia coli TA280] Length = 484 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|300929060|ref|ZP_07144554.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300462933|gb|EFK26426.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] Length = 426 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|145635462|ref|ZP_01791163.1| predicted inner membrane peptidase [Haemophilus influenzae PittAA] gi|145267336|gb|EDK07339.1| predicted inner membrane peptidase [Haemophilus influenzae PittAA] Length = 353 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + E K Q Q ++ ++ Sbjct: 200 VIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHK 259 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS++R + DK ++ G W G +A + L+D + Sbjct: 260 LFKQFVSQNRPCLDIDK---IATGEHWFGQQAIALQLVDEI 297 >gi|315252463|gb|EFU32431.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 426 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|324017645|gb|EGB86864.1| putative signal peptide peptidase SppA [Escherichia coli MS 117-3] Length = 426 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|300825402|ref|ZP_07105476.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|300522129|gb|EFK43198.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] Length = 426 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|193067665|ref|ZP_03048632.1| minor capsid protein C [Escherichia coli E110019] gi|192959077|gb|EDV89513.1| minor capsid protein C [Escherichia coli E110019] Length = 439 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|218703860|ref|YP_002411379.1| Minor capsid protein C from bacteriophage origin [Escherichia coli UMN026] gi|218430957|emb|CAR11831.1| Minor capsid protein C from bacteriophage origin [Escherichia coli UMN026] Length = 481 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 148 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 207 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 208 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 267 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 268 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 319 >gi|9626248|ref|NP_040584.1| capsid component [Enterobacteria phage lambda] gi|238903122|ref|YP_002928918.1| Minor capsid protein C (GPC) [Escherichia coli BW2952] gi|253774242|ref|YP_003037073.1| peptidase S49 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|137565|sp|P03711|VCAC_LAMBD RecName: Full=Minor capsid protein C; AltName: Full=Putative peptidase GPC; Short=GPC; Contains: RecName: Full=Capsid assembly protein NU3 gi|215109|gb|AAA96537.1| C (capsid component;439) [Enterobacteria phage lambda] gi|194021578|gb|ACF32387.1| capsid component [Enterobacteria phage DE3] gi|238861774|gb|ACR63772.1| Minor capsid protein C (GPC) [Escherichia coli BW2952] gi|242376543|emb|CAQ31251.1| enterobacteria phage lambda, capsid component [Escherichia coli BL21(DE3)] gi|253325286|gb|ACT29888.1| peptidase S49 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976951|gb|ACT42621.1| capsid component [Escherichia coli BL21(DE3)] Length = 439 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QVVLDTEAAVYSGQEAIDAGLAD 281 >gi|325497825|gb|EGC95684.1| capsid protein [Escherichia fergusonii ECD227] Length = 439 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|218553334|ref|YP_002386247.1| Minor capsid protein [Escherichia coli IAI1] gi|218360102|emb|CAQ97650.1| Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin [Escherichia coli IAI1] gi|323169838|gb|EFZ55494.1| minor capsid protein C [Escherichia coli LT-68] Length = 439 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|323963686|gb|EGB59201.1| peptidase S49 [Escherichia coli M863] Length = 439 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVAGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|193063327|ref|ZP_03044417.1| minor capsid protein C [Escherichia coli E22] gi|192930911|gb|EDV83515.1| minor capsid protein C [Escherichia coli E22] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|191166606|ref|ZP_03028435.1| minor capsid protein C [Escherichia coli B7A] gi|194427933|ref|ZP_03060478.1| minor capsid protein C [Escherichia coli B171] gi|260842764|ref|YP_003220542.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|190903411|gb|EDV63131.1| minor capsid protein C [Escherichia coli B7A] gi|194413908|gb|EDX30185.1| minor capsid protein C [Escherichia coli B171] gi|257757911|dbj|BAI29408.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|293413827|ref|ZP_06656476.1| capsid protein [Escherichia coli B185] gi|291433885|gb|EFF06858.1| capsid protein [Escherichia coli B185] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|74312884|ref|YP_311303.1| putative minor capsid protein [Shigella sonnei Ss046] gi|73856361|gb|AAZ89068.1| putative minor capsid protein precursor [Shigella sonnei Ss046] Length = 426 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|291281485|ref|YP_003498303.1| Minor capsid protein C [Escherichia coli O55:H7 str. CB9615] gi|290761358|gb|ADD55319.1| Minor capsid protein C [Escherichia coli O55:H7 str. CB9615] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|332343254|gb|AEE56588.1| minor capsid protein [Escherichia coli UMNK88] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSTYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|300936151|ref|ZP_07151089.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300458690|gb|EFK22183.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] Length = 426 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|293418637|ref|ZP_06661072.1| capsid protein [Escherichia coli B088] gi|291325165|gb|EFE64580.1| capsid protein [Escherichia coli B088] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|323190876|gb|EFZ76143.1| minor capsid protein C [Escherichia coli RN587/1] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|300917751|ref|ZP_07134397.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300415028|gb|EFJ98338.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] Length = 426 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|27366259|ref|NP_761787.1| putative inner membrane peptidase [Vibrio vulnificus CMCP6] gi|37679482|ref|NP_934091.1| putative periplasmic protease [Vibrio vulnificus YJ016] gi|320156768|ref|YP_004189147.1| putative protease sohB [Vibrio vulnificus MO6-24/O] gi|27362460|gb|AAO11314.1| SohB protein, peptidase U7 family [Vibrio vulnificus CMCP6] gi|37198226|dbj|BAC94062.1| periplasmic serine protease [Vibrio vulnificus YJ016] gi|319932080|gb|ADV86944.1| possible protease sohB [Vibrio vulnificus MO6-24/O] Length = 353 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 8/195 (4%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E I+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSI-DAKEVKSLREEITAILAVAGEGDEVLLRLESGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKAAGLPLTIAVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E KA + + ++ ++ F + E R P + ++ G Sbjct: 224 EFEQMTAGEYKRTLTMFGENTDKAREKFKQELEETHDLFKDFIRERR--PELELEKVATG 281 Query: 211 RIWTGAEAKKVGLID 225 W G +A +GL+D Sbjct: 282 EHWFGTQAHALGLVD 296 >gi|320654518|gb|EFX22546.1| Minor capsid protein C from bacteriophage origin [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|330910981|gb|EGH39491.1| head-tail preconnector protein GP5 [Escherichia coli AA86] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|315126452|ref|YP_004068455.1| periplasmic protease [Pseudoalteromonas sp. SM9913] gi|315014966|gb|ADT68304.1| putative periplasmic protease [Pseudoalteromonas sp. SM9913] Length = 338 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVH 104 ++E +E + I I+ D ++V L S GG + +Q+ K+ +T + Sbjct: 104 EVESLREEVTAIISIA-DPKKDKVLVRLESGGGVVHGYGLAASQLQRFKSAGIELTVSID 162 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P L K V + + + K Sbjct: 163 KVAASGGYMMACVADHIIAAPFAIVGSIGVIAQIPNFNKILKKNDVDFEQITAGEFKRTL 222 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + F E KA + ++ ++ ++ F VS R P +++ G W +A + GL+ Sbjct: 223 TLFGENTDKAREKFREEIEQTHVLFKTFVSTQR--PSLNMDLVATGEHWFATQAIEKGLV 280 Query: 225 DVV 227 D + Sbjct: 281 DTI 283 >gi|218704649|ref|YP_002412168.1| Minor capsid protein [Escherichia coli UMN026] gi|218431746|emb|CAR12628.1| Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin [Escherichia coli UMN026] Length = 439 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|323168446|gb|EFZ54126.1| minor capsid C protein [Shigella sonnei 53G] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|315252353|gb|EFU32321.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 426 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|327252651|gb|EGE64308.1| minor capsid protein C [Escherichia coli STEC_7v] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|320194281|gb|EFW68913.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|170769088|ref|ZP_02903541.1| minor capsid protein C (GPC) [Escherichia albertii TW07627] gi|170122160|gb|EDS91091.1| minor capsid protein C (GPC) [Escherichia albertii TW07627] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|320180588|gb|EFW55518.1| Head-tail preconnector protein GP5 [Shigella boydii ATCC 9905] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|284921449|emb|CBG34518.1| phage minor capsid protein [contains: capsid assembly protein] [Escherichia coli 042] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|209917788|ref|YP_002291872.1| putative phage minor capsid protein [Escherichia coli SE11] gi|209911047|dbj|BAG76121.1| putative phage minor capsid protein [Escherichia coli SE11] gi|320201852|gb|EFW76428.1| Head-tail preconnector protein GP5 [Escherichia coli EC4100B] gi|323965007|gb|EGB60470.1| peptidase S49 [Escherichia coli M863] Length = 439 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPG 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|294490182|gb|ADE88938.1| minor capsid protein C (GPC) [Escherichia coli IHE3034] Length = 439 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|119476008|ref|ZP_01616360.1| sohB protein, peptidase U7 family [marine gamma proteobacterium HTCC2143] gi|119450635|gb|EAW31869.1| sohB protein, peptidase U7 family [marine gamma proteobacterium HTCC2143] Length = 345 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 3/169 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + G A + + K P+ V +AAS GY+++C N I+AA + Sbjct: 132 VVLCLESPGGMVHTYGLAASQLARITKQNIPLTVVVDAVAASGGYMMACIGNKILAAPFA 191 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ + P L K + + + K + F E K + ++ ++ Sbjct: 192 VIGSIGVVAELPNFHRLLKKNDIDFELFTAGEHKRTVTMFGENTDKGKAKFVEELEDTHE 251 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 F VSE R P ++ G +W G A + LID + +E S Sbjct: 252 LFKSFVSEHR--PQVNVAEVATGEVWYGQRAIENNLIDDIQTSDEYLMS 298 >gi|224011339|ref|XP_002295444.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583475|gb|ACI64161.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 384 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 8/162 (4%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASN--IIVAA 124 +IV L SPGG+ +Q++++ V V +AAS GY+++C S+ + A Sbjct: 124 VIVLLESPGGAVSNYGLASSHLQRLRSTPGVKLTICVDTVAASGGYMMACMSSPGQLYCA 183 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q V+ L+K GV + MK EV + + MQD+VD Sbjct: 184 PFAMVGSIGVIGQSLNVQKTLEKYGVRPYVFRGGTMKNPVGMVGEVTKEGIGHMQDMVDR 243 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + F V+ +R N +D +S G ++ G +A K+GL+D Sbjct: 244 IHDAFREHVANARENSHHDG---ISTGDVFIGMQALKLGLVD 282 >gi|209919254|ref|YP_002293338.1| putative phage capsid structural protein [Escherichia coli SE11] gi|209912513|dbj|BAG77587.1| putative phage capsid structural protein [Escherichia coli SE11] Length = 439 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPG 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|301307482|ref|ZP_07213470.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|300837352|gb|EFK65112.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] Length = 445 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 116 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 175 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 176 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 235 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 236 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 287 >gi|309704860|emb|CBJ04212.1| putative minor capsid protein [Escherichia coli ETEC H10407] Length = 439 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPG 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|229515443|ref|ZP_04404902.1| SohB protein peptidase U7 family [Vibrio cholerae TMA 21] gi|229347212|gb|EEO12172.1| SohB protein peptidase U7 family [Vibrio cholerae TMA 21] Length = 356 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 10/198 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 108 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 166 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 167 RLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 226 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + ++ ++ F + + R + DK ++ Sbjct: 227 EFEQLTAGEYKRTLTMFGENTDKARDKFKLELEETHQLFKDFIRDHRPALDLDK---VAT 283 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +AK +GL+D + Sbjct: 284 GEHWFGTQAKALGLVDEI 301 >gi|163784834|ref|ZP_02179617.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] gi|159879894|gb|EDP73615.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] Length = 172 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 68/119 (57%) Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS A+ I A ++ GSIGV+ Q+ + ++K+GV I ++KS K P ++ P+ Sbjct: 1 ISAAATEIFANPGTITGSIGVIVQHMDLTNLMNKVGVKITNIKSGKNKDILYPNHKLKPE 60 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++++ V Y F+ V + R I +K +DGR+++G +A K+GL+D +G ++ Sbjct: 61 EAKLIKQTVLDVYEQFLDAVVKYRKIDKEKLRPYADGRVFSGRQALKLGLVDKLGNLQD 119 >gi|218694224|ref|YP_002401891.1| Minor capsid protein C from bacteriophage origin [Escherichia coli 55989] gi|218350956|emb|CAU96660.1| Minor capsid protein C from bacteriophage origin [Escherichia coli 55989] Length = 484 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 155 IIARLQQAASDPIVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 214 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 215 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 274 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 275 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 326 >gi|152995733|ref|YP_001340568.1| putative periplasmic protease [Marinomonas sp. MWYL1] gi|150836657|gb|ABR70633.1| Peptidase S49 domain protein [Marinomonas sp. MWYL1] Length = 347 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + +Q+++ P+ V ++AAS GY+++C ++ I+AA + Sbjct: 134 VVVRLESGGGVVHGYGLAASQLQRIREANIPLTICVDKVAASGGYMMACVADKIIAAPFA 193 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + LDK + ++ + K + E + + + ++ ++ Sbjct: 194 ILGSIGVVAQVPNLHRLLDKSLIDVELHTAGKYKRTLTMLGENTDEGREKFKQDLEDTHG 253 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F R VS R P ++ G W G+EA + LIDVV Sbjct: 254 LFKRFVSSQR--PQLDIEDIATGDTWYGSEAIENKLIDVV 291 >gi|332141318|ref|YP_004427056.1| putative inner membrane peptidase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551340|gb|AEA98058.1| putative inner membrane peptidase [Alteromonas macleodii str. 'Deep ecotype'] Length = 340 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 5/172 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + +Q++K + +T V ++AAS GY+++C ++ ++A++ + Sbjct: 129 VLVRLESGGGVVHGYGLAASQLQRIKEKGLKLTIAVDKVAASGGYMMACVADKLLASQFA 188 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +GSIGVL Q P L K + + + K + F E N + ++ ++ + Sbjct: 189 YIGSIGVLAQLPNFNKLLKKNDIEFEQHTAGEFKRTLTIFGENNDEGRAKFKEEIEEIHV 248 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 F V R ++ DK ++ G W G +AK +GL+D + ++ S Y Sbjct: 249 LFKDFVQSQRPDMNIDK---VATGEYWPGIKAKTLGLVDEITTSDDYILSHY 297 >gi|260854308|ref|YP_003228199.1| putative minor capsid protein [Escherichia coli O26:H11 str. 11368] gi|260855084|ref|YP_003228975.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|260855722|ref|YP_003229613.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|257752957|dbj|BAI24459.1| putative minor capsid protein [Escherichia coli O26:H11 str. 11368] gi|257753733|dbj|BAI25235.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|257754371|dbj|BAI25873.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] Length = 439 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPG 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|71065564|ref|YP_264291.1| serine peptidase [Psychrobacter arcticus 273-4] gi|71038549|gb|AAZ18857.1| protein C. Serine peptidase. MEROPS family S49 [Psychrobacter arcticus 273-4] Length = 402 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L + I++ + D + T++++ + S GG + I I ++ KP+ T V A SA Y Sbjct: 82 LADYIQQANDDYAVTSIVLDIDSGGGYVAGLDGITETI--YQSAKPIETFVSGDAYSAAY 139 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ +++ I A++ S +GSIGV + L+ G+ IK +S K + F+ ++ Sbjct: 140 WLAASTSKITASKKSGIGSIGVYGDHAEKSKALEDAGIKIKRFRSGRWKGAFNWFTPLSA 199 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +QD ++ S F V+ RNI KT+ +G ++ A+AK++GLID + Sbjct: 200 EEETRLQDGINESASIFFNYVAAQRNIDV-KTIQGWEGDDFSAAKAKELGLIDAI 253 >gi|15801354|ref|NP_287371.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 EDL933] gi|15830887|ref|NP_309660.1| minor capsid protein [Escherichia coli O157:H7 str. Sakai] gi|15831430|ref|NP_310203.1| minor capsid protein precursor [Escherichia coli O157:H7 str. Sakai] gi|168749764|ref|ZP_02774786.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|168752425|ref|ZP_02777447.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|168756502|ref|ZP_02781509.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|168758740|ref|ZP_02783747.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|168762579|ref|ZP_02787586.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|168764760|ref|ZP_02789767.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|168771031|ref|ZP_02796038.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|168771214|ref|ZP_02796221.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|168776026|ref|ZP_02801033.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168777928|ref|ZP_02802935.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168778011|ref|ZP_02803018.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168778058|ref|ZP_02803065.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168782498|ref|ZP_02807505.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|168784221|ref|ZP_02809228.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|168784369|ref|ZP_02809376.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|168787638|ref|ZP_02812645.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|168790271|ref|ZP_02815278.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|168800423|ref|ZP_02825430.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|168802662|ref|ZP_02827669.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|195938793|ref|ZP_03084175.1| putative minor capsid protein precursor [Escherichia coli O157:H7 str. EC4024] gi|195939967|ref|ZP_03085349.1| putative minor capsid protein precursor [Escherichia coli O157:H7 str. EC4024] gi|208807522|ref|ZP_03249859.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208810835|ref|ZP_03252668.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208814915|ref|ZP_03256094.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208816407|ref|ZP_03257586.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208821699|ref|ZP_03262019.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|208822514|ref|ZP_03262833.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|209398131|ref|YP_002270077.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|209399799|ref|YP_002270223.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|217328033|ref|ZP_03444115.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|217329770|ref|ZP_03445847.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|254792619|ref|YP_003077456.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|254792758|ref|YP_003077595.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|260855340|ref|YP_003229231.1| putative capsid protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|261227262|ref|ZP_05941543.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. FRIK2000] gi|261258730|ref|ZP_05951263.1| putative capsid protein/prohead protease [Escherichia coli O157:H7 str. FRIK966] gi|12514814|gb|AAG55983.1|AE005330_15 putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. EDL933] gi|13361097|dbj|BAB35056.1| minor capsid protein [Escherichia coli O157:H7 str. Sakai] gi|13361642|dbj|BAB35599.1| putative minor capsid protein precursor [Escherichia coli O157:H7 str. Sakai] gi|187766859|gb|EDU30703.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|187766895|gb|EDU30739.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|187766931|gb|EDU30775.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|187768547|gb|EDU32391.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|188013730|gb|EDU51852.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|188016014|gb|EDU54136.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|188998454|gb|EDU67454.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|188998583|gb|EDU67569.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|189000028|gb|EDU69014.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|189354482|gb|EDU72901.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|189356384|gb|EDU74803.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|189359977|gb|EDU78396.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|189360133|gb|EDU78552.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|189365302|gb|EDU83718.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|189367179|gb|EDU85595.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|189370253|gb|EDU88669.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|189372400|gb|EDU90816.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|189375403|gb|EDU93819.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|189377239|gb|EDU95655.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|208724341|gb|EDZ74049.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208727323|gb|EDZ76924.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208731563|gb|EDZ80251.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208733055|gb|EDZ81743.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208737999|gb|EDZ85682.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|208741822|gb|EDZ89504.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|209159531|gb|ACI36964.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|209161199|gb|ACI38632.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|217317189|gb|EEC25620.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|217318460|gb|EEC26886.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|254592019|gb|ACT71380.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|254592158|gb|ACT71519.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|257753989|dbj|BAI25491.1| putative capsid protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|320187947|gb|EFW62615.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC1212] gi|320191964|gb|EFW66610.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC1212] gi|320638195|gb|EFX07937.1| putative capsid protein/prohead protease [Escherichia coli O157:H7 str. G5101] gi|326338655|gb|EGD62480.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1125] gi|326348089|gb|EGD71798.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1044] Length = 439 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPG 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|309797023|ref|ZP_07691422.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308119306|gb|EFO56568.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 426 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPIVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|261210784|ref|ZP_05925076.1| SohB protein peptidase U7 family [Vibrio sp. RC341] gi|260840269|gb|EEX66849.1| SohB protein peptidase U7 family [Vibrio sp. RC341] Length = 255 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 10/196 (5%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E +S + +++ L + GG + + Sbjct: 7 PHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLD 65 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 66 RIKEAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDI 125 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + + K + F E KA + ++ ++ F + + R + DK ++ Sbjct: 126 EFEQLTAGEYKRTLTMFGENTDKARDKFKLELEETHQLFKDFIRDHRPALDLDK---VAT 182 Query: 210 GRIWTGAEAKKVGLID 225 G W G +A+ +GL+D Sbjct: 183 GEHWFGTQAQTLGLVD 198 >gi|159043193|ref|YP_001531987.1| peptidase S49 [Dinoroseobacter shibae DFL 12] gi|157910953|gb|ABV92386.1| peptidase S49 [Dinoroseobacter shibae DFL 12] Length = 265 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 20/253 (7%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 RG + D Q + +ER A+ + ++SPGGS I I+++ K PV Sbjct: 28 RGMLND-QSVGPLLERAFTKGKPDAVALVINSPGGSPAQSSLIGARIRRLAEEKEVPVYA 86 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY I+ A++ I TS+VGSIGV+ +++ G+ + + K Sbjct: 87 FVEDVAASGGYWIAAAADEIWLDATSIVGSIGVISASFGFHELMERQGIERRVYTAGKDK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAK 219 + PF P+ V+ ++ + + F ++ R +P D+ L G +W G + Sbjct: 147 SLLDPFRPERPEDVERLKGLQAQLHETFKGHITARRGAKLPEDRDLYT--GEVWIGQQGI 204 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 VGL D +G V + + D++ + + + P + L + S+++DT+ + Sbjct: 205 DVGLADGIGHVAPVMKEKFG---DKT--RFRTYGPRRP-----LISRFGFSVVDDTLHAL 254 Query: 280 KQTKVQGLWAVWN 292 + +GLWA + Sbjct: 255 ---EARGLWARYG 264 >gi|114047041|ref|YP_737591.1| putative periplasmic protease [Shewanella sp. MR-7] gi|113888483|gb|ABI42534.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. MR-7] Length = 338 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 8/202 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILTIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K + + Sbjct: 156 EIPLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + Q Q ++ ++ F VS+ R P ++ G W G Sbjct: 216 TAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLAKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 +A ++GLID + ++V L Sbjct: 274 QQAIELGLIDAISTSDDVLMQL 295 >gi|86148848|ref|ZP_01067109.1| sohB protein, peptidase U7 family protein [Vibrio sp. MED222] gi|85833365|gb|EAQ51562.1| sohB protein, peptidase U7 family protein [Vibrio sp. MED222] Length = 353 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E ++ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 164 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLKKHDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E + KA + ++ ++ ++ F + + R P ++ G Sbjct: 224 EFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLEKVATG 281 Query: 211 RIWTGAEAKKVGLIDVV 227 W G +A ++GL+D + Sbjct: 282 EHWFGTQAHELGLVDEI 298 >gi|218709038|ref|YP_002416659.1| putative periplasmic protease [Vibrio splendidus LGP32] gi|218322057|emb|CAV18116.1| sohB protein, peptidase U7 family [Vibrio splendidus LGP32] Length = 355 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E ++ +++ L S GG + + Sbjct: 107 PHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLASSQLD 165 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 166 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLKKHDI 225 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E + KA + ++ ++ ++ F + + R P ++ G Sbjct: 226 EFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLEKVATG 283 Query: 211 RIWTGAEAKKVGLIDVV 227 W G +A ++GL+D + Sbjct: 284 EHWFGTQAHELGLVDEI 300 >gi|322833314|ref|YP_004213341.1| Peptidase S49 domain protein [Rahnella sp. Y9602] gi|321168515|gb|ADW74214.1| Peptidase S49 domain protein [Rahnella sp. Y9602] Length = 347 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 87/166 (52%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + G A + ++ ++ + V ++AAS GY+++C ++ IVAA + Sbjct: 135 VLLRLESPGGVVHGYGLAASQLVRLRQSGIRLTVAVDKVAASGGYMMACVADRIVAAPFA 194 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L + + I+ + K + E + + ++ ++ ++ Sbjct: 195 IIGSIGVVAQIPNFNRLLKRNDIDIELHTAGEFKRTLTLLGENTEEGREKFREDLNETHV 254 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V ++R P ++ G W G +A++ GLID +G +++ Sbjct: 255 LFKEFVHQNR--PSLDIDAVATGEHWFGTQARENGLIDAIGTSDDL 298 >gi|119385040|ref|YP_916096.1| peptidase S49 [Paracoccus denitrificans PD1222] gi|119374807|gb|ABL70400.1| peptidase S49 [Paracoccus denitrificans PD1222] Length = 267 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 8/176 (4%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER + A+ ++L+SPGGS I I+++ + PV V ++AAS GY + Sbjct: 40 LERAFKRRKPAAVALALNSPGGSPVQSSLIGARIRRLAEERGIPVHAFVEDVAASGGYWL 99 Query: 115 SCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 + A++ I A ++S++GSIGV+ + +V+ + + G+ + + K+ PF P+ Sbjct: 100 ATAADYIWADDSSVLGSIGVISSGFGFVE-LIQRHGIERRVHTAGRSKSMLDPFRPQTPE 158 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ + ++ + F V R +P D+ L G IWTG EA ++GL D + Sbjct: 159 DIERLDRLLGPIHEAFKEQVRARRGNRLPEDRDLFT--GEIWTGREAVELGLADGI 212 >gi|113969812|ref|YP_733605.1| putative periplasmic protease [Shewanella sp. MR-4] gi|113884496|gb|ABI38548.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. MR-4] Length = 338 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V++ S GG + + +++ + P+ V ++AAS GY+++C +N + AA + Sbjct: 128 VVVNVESGGGMVHGYGLASSQLDRLRQAEIPLTICVDKVAASGGYMMACVANKVYAAPFA 187 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E + Q Q ++ ++ Sbjct: 188 IVGSIGVVAQLPNFNRLLKKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHV 247 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F VS+ R P ++ G W G +A ++GLID + ++V L Sbjct: 248 LFKAFVSKYR--PQLDLAKVATGEHWYGQQAIELGLIDAISTSDDVLMQL 295 >gi|324116806|gb|EGC10720.1| peptidase S49 [Escherichia coli E1167] Length = 439 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIITRVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGVALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|299145691|ref|ZP_07038759.1| putative signal peptide peptidase SppA [Bacteroides sp. 3_1_23] gi|298516182|gb|EFI40063.1| putative signal peptide peptidase SppA [Bacteroides sp. 3_1_23] Length = 304 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 10/203 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + E+ E + + + + +++ + S GGS A + AIQ + +K + ++ AS Sbjct: 95 TTEVAEMVNQAADSPKISGILLDIDSGGGSVDAIAPLVDAIQYAQKKKKCVVAYCDLCAS 154 Query: 110 AGYLISCASNIIVAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 A Y ++C + I+A+ T S GSIGV+ +P + + +GV + ++ S+ + PF Sbjct: 155 AAYYVACYCDEIIASNTISSEFGSIGVMMSFPDYAKYYENVGVKVHTIYSNLSSYKNGPF 214 Query: 168 SEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLID 225 ++ + +D F V R + +T + GR++ +AK+ GLID Sbjct: 215 EAAKEGKYDAIKTEELDPLARGFQEAVKNKRGSKLNLETEGIIAGRMFYANDAKENGLID 274 Query: 226 VVGGQEEVWQSLYALGVDQSIRK 248 VG ++ +ALG + +R+ Sbjct: 275 SVGTRD------FALGRVRELRR 291 >gi|324014985|gb|EGB84204.1| putative signal peptide peptidase SppA [Escherichia coli MS 60-1] Length = 426 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 217 DVRETLQSRMDATRRIFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 268 >gi|217977711|ref|YP_002361858.1| peptidase S49 [Methylocella silvestris BL2] gi|217503087|gb|ACK50496.1| peptidase S49 [Methylocella silvestris BL2] Length = 445 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 3/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI-SCASNII 121 D A+++ + SPGG A +++ N KPV+ V+ +A SA Y I S ASNI+ Sbjct: 106 DPGVRAILLEIDSPGGEASGAMEAGALVREAANAKPVVAFVNGLAGSAAYAIASGASNIV 165 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 V +SL GSIGV+ + + + G+ + + K + + + P A +Q Sbjct: 166 VTPSSSL-GSIGVVLLHLDRSEAIARAGLKPTLISAGAHKTDGTSLHALAPDARARIQAS 224 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +D Y FV+ V+ R + + + ++ ++ GA A VGL D G Sbjct: 225 IDELYDLFVKTVASHRGL-TEAVVRATEAGLFMGARAVSVGLADETG 270 >gi|110641352|ref|YP_669082.1| minor capsid protein C [Escherichia coli 536] gi|191173120|ref|ZP_03034653.1| minor capsid protein C [Escherichia coli F11] gi|110342944|gb|ABG69181.1| minor capsid protein C [Escherichia coli 536] gi|190906665|gb|EDV66271.1| minor capsid protein C [Escherichia coli F11] Length = 439 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRIFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|317509305|ref|ZP_07966925.1| peptidase family S49 [Segniliparus rugosus ATCC BAA-974] gi|316252361|gb|EFV11811.1| peptidase family S49 [Segniliparus rugosus ATCC BAA-974] Length = 311 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 8/190 (4%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVIT 101 RG + ++Q L + R +A A+ + ++SPGGS I I+++ K+ KPV+ Sbjct: 65 RGAL-NAQNLEAPLAEAFRVPNAVAVALIINSPGGSPAQSALIGDRIRQLSAKHEKPVLA 123 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 ++AAS GY ++CA++ I + + +GSIGV+ + ++KLG+ + + K Sbjct: 124 FCEDVAASGGYWLACAADEIFVSSGTAIGSIGVVSSSFGLTDAIEKLGLERRVHTAGLNK 183 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY---DKTLVLSDGRIWTGAEA 218 A PF P+ + + + + F+ V E R D+ L +D +W G A Sbjct: 184 ARLDPFMPEKPEDIAWLTGIQTDIHKVFIDWVKERRGDKLSGTDEELFNAD--VWIGRRA 241 Query: 219 KKVGLIDVVG 228 ++G+ D VG Sbjct: 242 VELGIADAVG 251 >gi|157157447|ref|YP_001463293.1| S49 family peptidase [Escherichia coli E24377A] gi|209919414|ref|YP_002293498.1| putative phage minor capsid protein [Escherichia coli SE11] gi|157079477|gb|ABV19185.1| peptidase, S49 (protease IV) family [Escherichia coli E24377A] gi|209912673|dbj|BAG77747.1| putative phage minor capsid protein [Escherichia coli SE11] Length = 436 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + +R+++ D +++ + SPGG I + + +KPV + A SA Y Sbjct: 107 IAKRLQQAISDPDVKGILLDIDSPGGEVAGAFDTADLIARAREQKPVWALASDTACSAAY 166 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +T VGSIGVL + V+ L+ GV + + + K + +P+S++ Sbjct: 167 LLASACSRRLITQTGTVGSIGVLMAHRCVEKALEIAGVDVTLIYAGAHKVDGNPYSQLPD 226 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q ++S+ F + VS+ + + L ++ ++ GA+A K GL D Sbjct: 227 DVRDEFQLSINSTREQFAQKVSDYTGLKKSRVLA-TEAAVFIGADAIKSGLAD 278 >gi|320660180|gb|EFX27694.1| putative phage minor capsid protein [Escherichia coli O55:H7 str. USDA 5905] Length = 439 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPG 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRIFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|49611742|emb|CAG75191.1| protease [Pectobacterium atrosepticum SCRI1043] Length = 350 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 138 VLLRLESPGGVVHGYGLAASQLQRLRQGGVRLTVAVDKVAASGGYMMACVADHIVAAPFA 197 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 198 IVGSIGVVAQIPNFHRLLKNKDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHT 257 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +AK + LID +G +++ Sbjct: 258 LFKDFVQQMR--PSLDIDSVATGEHWFGTQAKDLKLIDAIGTSDDL 301 >gi|229220652|ref|YP_050383.2| putative periplasmic protease [Pectobacterium atrosepticum SCRI1043] Length = 348 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q+++ +T V ++AAS GY+++C ++ IVAA + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLQRLRQGGVRLTVAVDKVAASGGYMMACVADHIVAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + ++ + K + F E + + ++ ++ ++ Sbjct: 196 IVGSIGVVAQIPNFHRLLKNKDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHT 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F V + R P ++ G W G +AK + LID +G +++ Sbjct: 256 LFKDFVQQMR--PSLDIDSVATGEHWFGTQAKDLKLIDAIGTSDDL 299 >gi|84393898|ref|ZP_00992641.1| sohB protein, peptidase U7 family [Vibrio splendidus 12B01] gi|84375495|gb|EAP92399.1| sohB protein, peptidase U7 family [Vibrio splendidus 12B01] Length = 349 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 8/197 (4%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 PH+ + G I D++E+ E ++ +++ L S GG + + Sbjct: 101 PHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLASSQLD 159 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + Sbjct: 160 RIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLKKHDI 219 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E + KA + ++ ++ ++ F + + R P ++ G Sbjct: 220 EFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLEKVATG 277 Query: 211 RIWTGAEAKKVGLIDVV 227 W G +A ++GL+D + Sbjct: 278 EHWFGTQAHELGLVDEI 294 >gi|309701424|emb|CBJ00728.1| Minor capsid protein [Escherichia coli ETEC H10407] Length = 439 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I ++++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARMRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|229220628|ref|NP_718503.2| putative periplasmic protease [Shewanella oneidensis MR-1] Length = 338 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V++ S GG + + +++ P+ V ++AAS GY+++C +N + AA + Sbjct: 128 VVVNVESGGGMVHGYGLASSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKVYAAPFA 187 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E + Q Q ++ ++ Sbjct: 188 IVGSIGVVAQLPNFNRLLKKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHV 247 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F VS+ R P ++ G W G +A ++GLID + ++V L Sbjct: 248 LFKAFVSKYR--PQLDLAKVATGEHWYGQQAIELGLIDAISTSDDVLMHL 295 >gi|326570109|gb|EGE20154.1| putative periplasmic protease [Moraxella catarrhalis BC8] Length = 325 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 IS + +++ L S GG +A G A + ++ + + V ++AAS GY+++C + Sbjct: 97 ISVANRGDEVVLRLESGGGQVHAYGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTA 156 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+A++ +++GSIGV+ Q P FL K V + + K + F E + + Sbjct: 157 DKIIASDFAVIGSIGVVSQLPNFHEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKH 216 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++ + F + + R P ++ G +W G +A ++GLID +G Sbjct: 217 QADIERIHELFKGFIHKYR--PQLDLERVATGEVWFGEDALELGLIDEIG 264 >gi|24349038|gb|AAN55947.1|AE015732_5 sohB protein, peptidase U7 family [Shewanella oneidensis MR-1] Length = 342 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 3/170 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V++ S GG + + +++ P+ V ++AAS GY+++C +N + AA + Sbjct: 132 VVVNVESGGGMVHGYGLASSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKVYAAPFA 191 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E + Q Q ++ ++ Sbjct: 192 IVGSIGVVAQLPNFNRLLKKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHV 251 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F VS+ R P ++ G W G +A ++GLID + ++V L Sbjct: 252 LFKAFVSKYR--PQLDLAKVATGEHWYGQQAIELGLIDAISTSDDVLMHL 299 >gi|308050237|ref|YP_003913803.1| inner membrane peptidase [Ferrimonas balearica DSM 9799] gi|307632427|gb|ADN76729.1| inner membrane peptidase [Ferrimonas balearica DSM 9799] Length = 338 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 11/191 (5%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V + S GG +A + +++ K P+ V ++AAS GY+++C + I++A + Sbjct: 129 VLVRVESGGGMVHAYGLAASQLDRIRQAKIPLTIAVDKVAASGGYMMACVGDKILSAPFA 188 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E N ++ ++ ++ Sbjct: 189 IVGSIGVIAQLPNFNKVLKKHDIEFEQHTAGDFKRTLTMFGENNEAGRDKFREELEETHL 248 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F V R + DK ++ G W G +A ++GL+D + ++ Y + D+ I Sbjct: 249 LFKEFVQRYRPELDLDK---VATGEHWFGLQALELGLVDAIQTSDD-----YLMAQDKEI 300 Query: 247 RKIKDWNPPKN 257 +++ + KN Sbjct: 301 LQLQ-YEEKKN 310 >gi|326559247|gb|EGE09678.1| putative periplasmic protease [Moraxella catarrhalis 46P47B1] gi|326560765|gb|EGE11132.1| putative periplasmic protease [Moraxella catarrhalis 103P14B1] gi|326569629|gb|EGE19681.1| putative periplasmic protease [Moraxella catarrhalis BC1] gi|326570847|gb|EGE20871.1| putative periplasmic protease [Moraxella catarrhalis BC7] gi|326574397|gb|EGE24339.1| putative periplasmic protease [Moraxella catarrhalis 101P30B1] gi|326576422|gb|EGE26331.1| putative periplasmic protease [Moraxella catarrhalis O35E] Length = 325 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 3/170 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCAS 118 IS + +++ L S GG +A + ++K +T V ++AAS GY+++C + Sbjct: 97 ISVANRGDEVVLRLESGGGQVHAYGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTA 156 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+A++ +++GSIGV+ Q P FL K V + + K + F E + + Sbjct: 157 DKIIASDFAVIGSIGVVSQLPNFHEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKH 216 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++ + F + + R P ++ G +W G +A ++GLID +G Sbjct: 217 QADIERIHELFKGFIHKYR--PQLDLERVATGEVWFGEDALELGLIDEIG 264 >gi|326559886|gb|EGE10286.1| putative periplasmic protease [Moraxella catarrhalis 7169] Length = 325 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 3/170 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 IS + +++ L S GG +A G A + ++ + + V ++AAS GY+++C + Sbjct: 97 ISVANRGDEVVLRLESGGGQVHAYGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTA 156 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+A++ +++GSIGV+ Q P FL K V + + K + F E + + Sbjct: 157 DKIIASDFAVIGSIGVVSQLPNFHEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKH 216 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++ + F + + R P ++ G +W G +A ++GLID +G Sbjct: 217 QADIERIHELFKGFIHKYR--PQLDLERVATGEVWFGEDALELGLIDEIG 264 >gi|15835395|ref|NP_297154.1| protease IV, putative [Chlamydia muridarum Nigg] gi|270285572|ref|ZP_06194966.1| protease IV, putative [Chlamydia muridarum Nigg] gi|270289583|ref|ZP_06195885.1| protease IV, putative [Chlamydia muridarum Weiss] gi|301336969|ref|ZP_07225171.1| protease IV, putative [Chlamydia muridarum MopnTet14] gi|7190808|gb|AAF39584.1| protease IV, putative [Chlamydia muridarum Nigg] Length = 332 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 8/218 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNR 96 A +A G + Q ++ + L++ + PGG + + + A+ K K Sbjct: 73 AIMANSGSAKRLQSTLQSLSEAPYKGRVKGLLIKMDCPGGEIFEIDRMSAALSFWKQKLG 132 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKS 154 PV V + AS GY ++C ++ I TSL+GSIGV PY +K L +LGV Sbjct: 133 IPVHVFVSGLCASGGYYVACIADRIGTTSTSLIGSIGVR-SGPYFNIKEGLQRLGVETAI 191 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIW 213 + + KA +PFS + Q +VD+ Y FV V + R+ + + + R++ Sbjct: 192 LTAGDDKAPLNPFSPWTEEEYAERQGIVDALYEQFVDHVVKHRSQLSKEHVTQVLGARVF 251 Query: 214 TGAEAKKVGLIDVVG-GQEEVWQSLYAL-GVDQSIRKI 249 +A + GL+D+V QE+ L + GV + R I Sbjct: 252 IAKQALEEGLVDIVNQTQEQALDDLAGVCGVKEDYRVI 289 >gi|296113403|ref|YP_003627341.1| S49 family peptidase [Moraxella catarrhalis RH4] gi|295921097|gb|ADG61448.1| S49 family peptidase [Moraxella catarrhalis RH4] gi|326566604|gb|EGE16747.1| putative periplasmic protease [Moraxella catarrhalis 12P80B1] gi|326576010|gb|EGE25933.1| putative periplasmic protease [Moraxella catarrhalis CO72] Length = 325 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 3/170 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCAS 118 IS + +++ L S GG +A + ++K +T V ++AAS GY+++C + Sbjct: 97 ISVANRGDEVVLRLESGGGQVHAYGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTA 156 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+A++ +++GSIGV+ Q P FL K V + + K + F E + + Sbjct: 157 DKIIASDFAVIGSIGVVSQLPNFHEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKH 216 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++ + F + + R P ++ G +W G +A ++GLID +G Sbjct: 217 QADIERIHELFKGFIHKYR--PQLDLERVATGEVWFGEDALELGLIDEIG 264 >gi|160871776|ref|ZP_02061908.1| protease [Rickettsiella grylli] gi|160872532|ref|ZP_02062664.1| protease [Rickettsiella grylli] gi|159120575|gb|EDP45913.1| protease [Rickettsiella grylli] gi|159121331|gb|EDP46669.1| protease [Rickettsiella grylli] Length = 319 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 37 HVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 H+ + I+G I D + +IE ++ D + +I+ ++SPGGS I+ I+ Sbjct: 68 HIGLVDIKGIINDNSAANADNVIEGLQNAFEDKNTRTVILRINSPGGSPVQAAQIYHEIR 127 Query: 92 KVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDK 147 ++++ P + ++ ASA Y I+ AS+ I A +SLVGSIGVL + +V+ + K Sbjct: 128 YLRHQYPKTKLYAVCDDLCASAAYYIASASDRIYANPSSLVGSIGVLMDGFGFVET-MKK 186 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV + + + K PFS ++ + ++ + + F+ V + R L Sbjct: 187 VGVERRLLTAGDHKGFLDPFSPEKLDEKRIAERMLANVHQQFIHAVKQGRGNRLKNNPEL 246 Query: 208 SDGRIWTGAEAKKVGLIDVVG 228 G WTG EA +GLID G Sbjct: 247 FSGLAWTGEEALPLGLIDGFG 267 >gi|153838850|ref|ZP_01991517.1| peptidase S49 [Vibrio parahaemolyticus AQ3810] gi|149747734|gb|EDM58634.1| peptidase S49 [Vibrio parahaemolyticus AQ3810] Length = 295 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 10/195 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVGSLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + ++ ++ F + E R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVAT 280 Query: 210 GRIWTGAEAKKVGLI 224 G W G +AK++GL+ Sbjct: 281 GEHWFGTQAKELGLV 295 >gi|212213146|ref|YP_002304082.1| putative periplasmic protease [Coxiella burnetii CbuG_Q212] gi|212011556|gb|ACJ18937.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii CbuG_Q212] Length = 338 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 8/177 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAAS 109 +E+ + +RDD +++ L S GG + +Q++K+ ++ + ++A S Sbjct: 118 EEITAVLTTATRDDE---VLLRLESGGGVVHGYGLAASQLQRIKDAHIKLVIAIDKVAVS 174 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GYL++C ++ I+AA ++VGSIGVL Q P +L K + + V + K + F E Sbjct: 175 GGYLMACVADRIIAAPFAIVGSIGVLAQLPNFHRYLRKKYIDFEQVMAGDYKRTLTLFGE 234 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 K M++ V+ ++ F + E R + ++ ++ G W ++A + L+D Sbjct: 235 NTEKGRAKMKEEVEETHTLFKSFIKEHRQEVDVEQ---IATGEHWYASKALDLRLVD 288 >gi|331682243|ref|ZP_08382862.1| minor capsid protein C (GPC) [Escherichia coli H299] gi|331079874|gb|EGI51053.1| minor capsid protein C (GPC) [Escherichia coli H299] Length = 439 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQYRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|254509786|ref|ZP_05121853.1| peptidase, family S49 [Rhodobacteraceae bacterium KLH11] gi|221533497|gb|EEE36485.1| peptidase, family S49 [Rhodobacteraceae bacterium KLH11] Length = 265 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 3/189 (1%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--P 98 +A RG + ++ L +ER R A+ + ++SPGGS I I+++ + P Sbjct: 25 MAGRGSM-NANALAPVLERAFRKGKPAAVALEVNSPGGSPVQSSLIGARIRRLADELDIP 83 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V V ++AAS GY ++ +++ I A ++S++GSIGV+ FL + GV + + Sbjct: 84 VYAFVEDVAASGGYWLAASADEIWADDSSVLGSIGVISSGFGAHVFLARQGVERRVHTAG 143 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ PF+ + V ++ ++ + F+ V R+ D L +G +W A Sbjct: 144 QSKSMLDPFAPEKKEDVARLKVLLGDIHENFIDHVKSRRDGKLDPEADLFNGEVWLARRA 203 Query: 219 KKVGLIDVV 227 +++GLID + Sbjct: 204 QELGLIDGI 212 >gi|153840986|ref|ZP_01993380.1| secreted protease [Vibrio parahaemolyticus AQ3810] gi|149745539|gb|EDM56755.1| secreted protease [Vibrio parahaemolyticus AQ3810] Length = 192 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 2/136 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + + + + Sbjct: 10 PLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHDIEYEQLTA 69 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E KA + ++ ++ F + E R P + ++ G W G + Sbjct: 70 GEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVATGEHWFGTQ 127 Query: 218 AKKVGLIDVVGGQEEV 233 AK++GL+D + +++ Sbjct: 128 AKELGLVDEISTSDDL 143 >gi|324114286|gb|EGC08257.1| peptidase S49 [Escherichia fergusonii B253] Length = 439 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGVFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|164662519|ref|XP_001732381.1| hypothetical protein MGL_0156 [Malassezia globosa CBS 7966] gi|159106284|gb|EDP45167.1| hypothetical protein MGL_0156 [Malassezia globosa CBS 7966] Length = 704 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 109/205 (53%), Gaps = 11/205 (5%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSP 76 V + H +D + VA I ++G ++ + E I +++ + + A+++ ++S Sbjct: 311 VRICANEHADDPADKVAVIFLQGIMDRNSKSCSVSEAIHGLKQAAENKDIRAIVLRINSG 370 Query: 77 GGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG A EA++ AIQ V+ +KPV+ +AAS Y + A++ I A E+++ GSIGV Sbjct: 371 GGEVIASEALWAAIQHVRKSTQKPVVASFGSVAASGAYYAASAADAIFACESTMTGSIGV 430 Query: 135 LFQYPYV-KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 F P + + +DK+ ++++++ + + A S +++ + V ++ VD Y F+ V Sbjct: 431 AFARPTILRELIDKVQLNVQTILAGSIGA--SVLHDLDDQHVSRLRTHVDEMYKDFLHKV 488 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEA 218 + R + D L+ GRI TG A Sbjct: 489 MQGRGMSQDVLAGLAGGRIMTGLAA 513 >gi|163750235|ref|ZP_02157477.1| sohB protein, peptidase U7 family [Shewanella benthica KT99] gi|161330091|gb|EDQ01075.1| sohB protein, peptidase U7 family [Shewanella benthica KT99] Length = 335 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 12/209 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 P V + +G I+ S+ E I I I+ D +IV++ S GG + + Sbjct: 88 PRVFVVDFKGSIDASEVASLREEISAILTIAETDDE--VIVNVESGGGMVHGYGLASSQL 145 Query: 91 QKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ +T V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K Sbjct: 146 DRLRQAGIHLTICVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQIPNFNKLLKKHD 205 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLS 208 + + + K + F E + Q ++ ++ F + +++ R + DK ++ Sbjct: 206 IDYEQHTAGDFKRTLTLFGENTDEGRAKFQAELEDTHVLFKQFIAKYRPELDLDK---VA 262 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G W G +A K+GL+D + ++V L Sbjct: 263 TGEHWYGQQAIKLGLVDAISTSDDVVMKL 291 >gi|149912749|ref|ZP_01901283.1| peptidase S49 [Roseobacter sp. AzwK-3b] gi|149813155|gb|EDM72981.1| peptidase S49 [Roseobacter sp. AzwK-3b] Length = 265 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 3/198 (1%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVIT 101 R Q+ D + L IE+ R A+ + ++SPGGS I I+++ K PV Sbjct: 28 RAQLSD-EALAPSIEKAFRRGKPKAVALLINSPGGSPVQSSLIASRIRRLAEEKDIPVHA 86 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++AAS GY ++ A++ I S+VGSIGV+ L + GV + S K Sbjct: 87 FVEDVAASGGYWLATAADDIWVDPASIVGSIGVISAGFGAPVLLARQGVERRVHTSGKSK 146 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + PF + V ++D+++ + F V+ R + L G W G A ++ Sbjct: 147 SFLDPFLPQKDEDVSRLKDILEQMHKVFEAQVTSRRGDKLAQNDDLFTGEFWLGQRAVEL 206 Query: 222 GLIDVVGGQEEVWQSLYA 239 GL+D +G + LY Sbjct: 207 GLVDGIGHVAPKMKELYG 224 >gi|260459549|ref|ZP_05807803.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] gi|259034351|gb|EEW35608.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] Length = 302 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 17/196 (8%) Query: 59 RISRDDSATALIVSLSSPGGSAY---AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +++ D +A+++ + SPGG A+ R+ ++ + +P++ + +A SA Y I+ Sbjct: 96 QVANDAGVSAIVIDIDSPGGRVDLVPETAAMIRSARR--DGRPIVAVANTIALSAAYWIA 153 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ IV + + VGSIGV + + L+ GV + + + P K E +PF ++ + Sbjct: 154 SAADEIVVSPSGAVGSIGVYTVHEDMSAALEAEGVKVTMISAGPRKVEGNPFQPLDEAGL 213 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPY----------DKTLVLSDGRIWTGAEAKKVGLID 225 + V + Y F V++ R +P DK GR EA K+G++D Sbjct: 214 ASLLGNVTTFYGMFAGDVAKGRGVPVSVVKADPESSDKN--FGGGRAVLAQEALKLGMVD 271 Query: 226 VVGGQEEVWQSLYALG 241 V EE L G Sbjct: 272 RVATLEETVARLAKGG 287 >gi|330808706|ref|YP_004353168.1| peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376814|gb|AEA68164.1| putative peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 343 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C I++A + Sbjct: 130 VVLRLESGGGMVHSYGLASSQLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFA 189 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +D ++ Sbjct: 190 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHE 249 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F VS R + D+ ++ G +W G A+ GL+D Sbjct: 250 LFKNFVSNYRPQLAIDE---VATGEVWLGVAAQGKGLVD 285 >gi|226330245|ref|ZP_03805763.1| hypothetical protein PROPEN_04158 [Proteus penneri ATCC 35198] gi|225201040|gb|EEG83394.1| hypothetical protein PROPEN_04158 [Proteus penneri ATCC 35198] Length = 286 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV-HEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IVAA + Sbjct: 74 VLLRLESPGGMVHGYGLAAAQLTRLKEKGIKLTAVVDKVAASGGYMMACVADKIVAAPFA 133 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + L K + ++ + K + E + + + ++ ++ Sbjct: 134 IIGSIGVVAQIPNIHRLLKKNDIDVELHTAGEYKRTLTLLGENTEEGREKFKQDLNETHL 193 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F V + R P ++ G W G+EA GLID VG Sbjct: 194 LFKSFVHKYR--PQLDIDSVATGEYWYGSEALNRGLIDEVG 232 >gi|170020107|ref|YP_001725061.1| peptidase S49 [Escherichia coli ATCC 8739] gi|169755035|gb|ACA77734.1| peptidase S49 [Escherichia coli ATCC 8739] Length = 439 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G E GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEVIDAGLAD 281 >gi|269217110|ref|ZP_06160964.1| signal peptide peptidase SppA [Slackia exigua ATCC 700122] gi|269129247|gb|EEZ60332.1| signal peptide peptidase SppA [Slackia exigua ATCC 700122] Length = 406 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 6/210 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 ++ + DD A+++ ++S GG++ AGE + + I KP++ + SA Y IS Sbjct: 173 LKSVEADDDIKAVVLRVNSGGGTSTAGEEMSQLIAGFD--KPIVVSSASINCSAAYEISS 230 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 ++ I ++ +G+IG + Q LDKLG+ + S+ S+ K + + + Sbjct: 231 QADYIYVNHSTAIGAIGTIMQTYDASELLDKLGIKVNSIASAESKDSSYGTRPLTDEERE 290 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q++V FV V+ R + + L+ G +TG +A GL D +G ++ Sbjct: 291 YYQNLVSQINAQFVSSVASGRGMSVAQVQELATGMEFTGDDAVANGLADEIGTYDDALAK 350 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 LG + + D +P ++ DL +L Sbjct: 351 AAELGGIKGDFDVVDADPSRS----DLASL 376 >gi|120598431|ref|YP_963005.1| putative periplasmic protease [Shewanella sp. W3-18-1] gi|120558524|gb|ABM24451.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. W3-18-1] Length = 338 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 8/202 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILAIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + Sbjct: 156 DIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + Q Q+ ++ ++ F VS+ R P ++ G W G Sbjct: 216 TAGDFKRTLTVFGENTDEGRQKFQEELEETHVLFKAFVSKYR--PELNLEKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 +A ++GL+D + ++V SL Sbjct: 274 QQAIELGLVDEILTSDDVVMSL 295 >gi|330815838|ref|YP_004359543.1| peptidase S49 [Burkholderia gladioli BSR3] gi|327368231|gb|AEA59587.1| peptidase S49 [Burkholderia gladioli BSR3] Length = 353 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 5/190 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + + + D S + +++ + SPGG Y I+ + +KPV + +AASA Sbjct: 94 EQFMSQFRAMMADSSVSGILIDIDSPGGGVYGVPEAAAEIRAARGKKPVYAVANSVAASA 153 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ +++ + +GSIGV + + L+K G+ V + K E +PF + Sbjct: 154 AYWITSSASEFYVTSSGELGSIGVYASHQDLSAALEKEGIKTTLVSAGKYKTERNPFGPL 213 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV---LSDGRIWTGAEAKKVGLIDVV 227 + +A MQ +D+ Y FVR V+ SRN+ D V + GR+ ++A + D V Sbjct: 214 SKEAEAAMQSRIDACYRTFVRDVARSRNV--DAAYVNARMGQGRLVGASDAVAAKMADGV 271 Query: 228 GGQEEVWQSL 237 +EV L Sbjct: 272 MTFDEVLAKL 281 >gi|91975697|ref|YP_568356.1| peptidase S49 [Rhodopseudomonas palustris BisB5] gi|91682153|gb|ABE38455.1| peptidase S49 [Rhodopseudomonas palustris BisB5] Length = 299 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 3/186 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 +ER +A A+ ++++SPGGS I+ I+ + K PVI V ++AAS GY+I Sbjct: 60 LERAFATRNAKAVALAINSPGGSPVQSRLIYLRIRALAAEKKLPVIAFVEDVAASGGYMI 119 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I +S+VGSIGV+ + + K+GV + + KA+ PF +P Sbjct: 120 ACAADEIYCDPSSIVGSIGVVGGGFGFQEMIKKIGVERRLYTAGDHKAQLDPFLPEDPAD 179 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V ++ + + F+ LV +SR VL G W GA + +GL D +G V Sbjct: 180 VARVKALQREIHALFISLVKDSRGARLKGAEDVLFSGEYWAGATSVSLGLSDAIGDLRAV 239 Query: 234 WQSLYA 239 ++ + Sbjct: 240 LRARFG 245 >gi|88859935|ref|ZP_01134574.1| protease (may metabolize cleaved signal peptides) [Pseudoalteromonas tunicata D2] gi|88817929|gb|EAR27745.1| protease (may metabolize cleaved signal peptides) [Pseudoalteromonas tunicata D2] Length = 337 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + ++++KN +T V ++AAS GY+++C ++ +VAA + Sbjct: 125 VLLRLESGGGVVHGYGLAASQLERIKNAGINLTVCVDKVAASGGYMMACVADKVVAAPFA 184 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + + K + F E +A ++ + ++ Sbjct: 185 IIGSIGVIAQIPNFNKILKKNDIEFEQITAGEFKRTLTLFGENTDQARDKFREEIQQTHE 244 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 F + VS R P ++ G W ++A + GL+D + ++V Sbjct: 245 LFKQFVSLKR--PTLDLTEVATGEHWFASQAIEKGLVDEIATSDDVL 289 >gi|170727245|ref|YP_001761271.1| putative periplasmic protease [Shewanella woodyi ATCC 51908] gi|169812592|gb|ACA87176.1| Peptidase S49 domain protein [Shewanella woodyi ATCC 51908] Length = 343 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 8/209 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 + P V + +G I D+ E+ E IS + IV++ S GG + Sbjct: 94 SEPRVFVVDFKGSI-DANEVSSLREEISAIIAIAEPGDEAIVNVESGGGMVHGYGLASSQ 152 Query: 90 IQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ +T V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K Sbjct: 153 LDRLRQANIHLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQVPNFNKLLKKH 212 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + K + F E + + Q ++ ++ F +S+ R P + ++ Sbjct: 213 DIDYEQHTAGDFKRTLTVFGENTDEGREKFQQELEETHELFKGFISQYR--PELELAKVA 270 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G W G +A ++GLID + ++V +L Sbjct: 271 TGEHWYGQQAIELGLIDAIATSDDVVMNL 299 >gi|90408618|ref|ZP_01216772.1| possible protease SohB [Psychromonas sp. CNPT3] gi|90310262|gb|EAS38393.1| possible protease SohB [Psychromonas sp. CNPT3] Length = 349 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 + V L S GG + +Q++K+ +T V ++AAS GY+++C ++ I+AA + Sbjct: 136 VFVRLESGGGMVHGYGLAASQLQRLKDNNISLTISVDKVAASGGYMMACIADKIIAAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + + K + F E + + + ++ Sbjct: 196 ILGSIGVIAQIPNFNKLLKKHDIEFEQLTAGQYKRTLTMFGENDDLGRDKFKQELQETHD 255 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + VS+ R N+ +K ++ G W G +A ++ LID + Sbjct: 256 LFKQFVSQHRPNLDMEK---IATGEHWYGLQAIELDLIDKI 293 >gi|114320584|ref|YP_742267.1| peptidase S49 [Alkalilimnicola ehrlichii MLHE-1] gi|114226978|gb|ABI56777.1| peptidase S49 [Alkalilimnicola ehrlichii MLHE-1] Length = 311 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 10/236 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED----SQELIER-IERISRDDSATALIV 71 LV L + + S PH+A++ + G I S EL+ + ++ A +++ Sbjct: 41 LVALLIPFASGFLFERPTGPHLAKVNVTGLISADELASAELVNQGLQAAFNAPRAEGVVL 100 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS I+ I +++ + V + ++ AS Y I+ A++ I S+ Sbjct: 101 YINSPGGSPVQSNRIYSEINRLREQHQGMAVYAVIDDVGASGAYYIASAADEIFVNPASV 160 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ ++KLGV + + KA PF+ M+ +++ + Sbjct: 161 VGSIGVISGGFGFTEAMEKLGVERRIYTAGENKAFLDPFAPEEEAHQAHMERLLEEVHSQ 220 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 F+ V R L G IWTG + ++GL D G V + + GVDQ Sbjct: 221 FIADVRAGRGERLADDDRLFSGLIWTGESSVELGLADGFGDIAHVAREV--AGVDQ 274 >gi|294085840|ref|YP_003552600.1| peptidase S49 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665415|gb|ADE40516.1| peptidase S49 [Candidatus Puniceispirillum marinum IMCC1322] Length = 280 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVA 123 A A+ + ++SPGGS I R I+ + R PV+ ++AAS GY ++ +++ I A Sbjct: 55 AKAVALIINSPGGSPVQSSLIGRRIRDLAKRADVPVLAFCEDVAASGGYWLAASADEIYA 114 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S++GSIGV+ + K+GV + + K PF + V+ ++ + Sbjct: 115 DPASIIGSIGVVSAGFGFDKAIKKIGVDRRVHTAGESKMILDPFQPEQSEEVERLKALQA 174 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-L 240 + F+ + R + D+ + S G WTG A K+GL+D VG E+ Q++ + Sbjct: 175 EIHTQFIAHIENRRGAKLKGDRAELFS-GAFWTGETAVKLGLVDAVG---EIRQTINSRF 230 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLS 267 G D + I+ P + L NLS Sbjct: 231 GDDTELMMIE---PKRKLLPFGLTNLS 254 >gi|260898467|ref|ZP_05906963.1| putative protease SohB [Vibrio parahaemolyticus Peru-466] gi|308089023|gb|EFO38718.1| putative protease SohB [Vibrio parahaemolyticus Peru-466] Length = 294 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 10/194 (5%) Query: 36 PHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I+ + E I I ++R+ +++ L S GG + + Sbjct: 105 PHLFVLDFNGSIDAKEVGSLREEITAILAVARE--GDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + ++ ++ F + E R P + ++ Sbjct: 223 IEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVAT 280 Query: 210 GRIWTGAEAKKVGL 223 G W G +AK++GL Sbjct: 281 GEHWFGTQAKELGL 294 >gi|145300014|ref|YP_001142855.1| periplasmic protease [Aeromonas salmonicida subsp. salmonicida A449] gi|142852786|gb|ABO91107.1| probable protease sohB [Aeromonas salmonicida subsp. salmonicida A449] Length = 335 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 84/164 (51%), Gaps = 3/164 (1%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S +++ L S GG + +Q+++++ +T + ++AAS GY+++C ++ I+A Sbjct: 121 SGDEVLLRLESGGGVVHGYGLAASQLQRLRDKGIKLTVAIDKVAASGGYMMACVADQILA 180 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A ++VGSIGV+ Q P L K + + + K + F E + + ++ + Sbjct: 181 APFAIVGSIGVIAQLPNFNKLLKKHDIEFEMHTAGQYKRTITMFGENDDLGREKFREELG 240 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + F V+E R P+ ++ G W ++AK +GL+D + Sbjct: 241 AIHERFKAFVAEHR--PHLDIDSVTTGEHWLASQAKGLGLVDTL 282 >gi|320197690|gb|EFW72301.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327] Length = 439 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 110 IISRLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + + + GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQIARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRRMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|304311309|ref|YP_003810907.1| Peptidase family S49 [gamma proteobacterium HdN1] gi|301797042|emb|CBL45255.1| Peptidase family S49 [gamma proteobacterium HdN1] Length = 344 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 6/183 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + ++++K R P+ V ++AAS GY+++C +N I+AA + Sbjct: 130 VVMRLESPGGQVHMYGFAASQLERLKTRNIPLTVCVDKVAASGGYMMACVANRIIAAPFA 189 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ + P L +L + + K + E + ++ ++ + Sbjct: 190 IVGSIGVVAELPNFNRVLKRLDIDYDVYTAGEFKRTVTMMGENTADGIAKFKEELEDTQV 249 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F LV R P ++ G W G+ A LID +G ++ L+ L + I Sbjct: 250 LFKALVHRHR--PQLAIDGVATGEHWYGSSALSNALIDELGTSDDY---LFDLSKNADIF 304 Query: 248 KIK 250 +IK Sbjct: 305 EIK 307 >gi|160871575|ref|ZP_02061707.1| probable protease SohB [Rickettsiella grylli] gi|159120374|gb|EDP45712.1| probable protease SohB [Rickettsiella grylli] Length = 330 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG +Q++KN+ P+ + ++AAS GYL++C ++ ++AA + Sbjct: 126 VVLRLESAGGMVAPYGLAASQLQRLKNKHIPLTITIDKIAASGGYLMACVADKLLAAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL K + + + + K + F E KA + Q ++ +H Sbjct: 186 IIGSIGVVAQLPNFHRFLKKRDIDFELLTAGEYKRTLTLFGENTSKAREKTQADLEEIHH 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + +R D V + G W +A + L+D + Sbjct: 246 LFKSFIQSNRK-KIDIHEV-ATGAHWLAKDALALHLVDAL 283 >gi|119775254|ref|YP_927994.1| putative periplasmic protease [Shewanella amazonensis SB2B] gi|119767754|gb|ABM00325.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella amazonensis SB2B] Length = 337 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 8/161 (4%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + + Sbjct: 156 PLTACIDKVAASGGYMMACVANRIYAAPFAIVGSIGVVAQLPNFNRLLKKHDIDYEQHTA 215 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGA 216 K + F E + Q ++ ++ ++ F VS+ R + DK ++ G W G Sbjct: 216 GDFKRTLTLFGENTEEGRQKFREELEETHQLFKAFVSKYRPELDLDK---VATGEHWYGQ 272 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +A +GL+D + +++ + D+++ K++ + P K Sbjct: 273 QALDLGLVDSISTSDDL---MLTAAKDRTLIKLR-YQPRKK 309 >gi|332971011|gb|EGK09983.1| signal peptide peptidase SppA [Psychrobacter sp. 1501(2011)] Length = 357 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 10/204 (4%) Query: 35 SPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +PH+A + I G I ++ ++ + + A++++++SPGGS + I++ Sbjct: 97 TPHLAVVDIEGVISADDPANAYDVSAALTEAFESKGSKAVVLNINSPGGSPVQSDQIWQT 156 Query: 90 IQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++ + P + + +M AS Y I+ A++ I +SLVGSIGV+ V+ + Sbjct: 157 MMDLRKQHPDKKLYAVIGDMGASGAYYIASAADEIYVNPSSLVGSIGVIMPGYNVEGLMK 216 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKT 204 K GV ++ + K S +++ Q ++ V+++++ F+ V + R + + Sbjct: 217 KAGVKDTTMTAGEYKDILSISRDLSDYEKQHIESVLNNTHKHFINAVKQGRGDRLKDPEK 276 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 L G WTG +A +GL D G Sbjct: 277 NKLFTGLFWTGEQAIALGLADKKG 300 >gi|146293490|ref|YP_001183914.1| putative periplasmic protease [Shewanella putrefaciens CN-32] gi|145565180|gb|ABP76115.1| Peptidase S49, N-terminal domain protein [Shewanella putrefaciens CN-32] gi|319426794|gb|ADV54868.1| Peptidase S49 domain protein [Shewanella putrefaciens 200] Length = 338 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 8/202 (3%) Query: 41 IAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I +G I D+ E+ E IS + ++V++ S GG + + +++ Sbjct: 97 IDFKGSI-DAAEVASLREEISAILAIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQA 155 Query: 97 KPVITE-VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 ++T V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + Sbjct: 156 DILLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQH 215 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E + Q Q+ ++ ++ F VS+ R P ++ G W G Sbjct: 216 TAGDFKRTLTVFGENTDEGRQKFQEELEETHVLFKAFVSKYR--PELNLEKVATGEHWYG 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 +A ++GL+D + ++V SL Sbjct: 274 QQAIELGLVDEILTSDDVVMSL 295 >gi|327480845|gb|AEA84155.1| putative periplasmic protease [Pseudomonas stutzeri DSM 4166] Length = 340 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + G A + ++ P+ V ++AAS GY+++C N I+ A + Sbjct: 126 VVLRLESGGGMVHGYGLAASQLVRIRDAGVPLTVCVDKVAASGGYMMACIGNRILTAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + F E K + Q+ +D+++ Sbjct: 186 ILGSIGVVAQLPNVHRLLKKHDVDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDTTHE 245 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R N+ D ++ G +W G A L D Sbjct: 246 LFKNFVARYRQNLSIDD---VATGEVWLGIAALGKHLAD 281 >gi|87306471|ref|ZP_01088618.1| endopeptidase IV; signal peptide peptidase [Blastopirellula marina DSM 3645] gi|87290650|gb|EAQ82537.1| endopeptidase IV; signal peptide peptidase [Blastopirellula marina DSM 3645] Length = 349 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 15/216 (6%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIE-RIERISRDDSATALIVSLSSPGGSAYA 82 Y+S D +A I + G I + + I +I+ +D + A+++ + SPGGS A Sbjct: 62 YYSGDKMATDK---IALIRVEGLIMEGEGYIRNQIDLARKDKNVKAIVLRVDSPGGSVSA 118 Query: 83 GEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCA----SNIIVAAETSLVGSIGVLF 136 + I+ + +++ + P++ + A S GY ++ A ++I A T++ GSIGV+ Sbjct: 119 SDYIYHHLNELREDREIPLVVSMGSSATSGGYYVAMAVGDEKDVIFAEPTTITGSIGVII 178 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + V L + + S+ S K S + +++Q +V+ + F+ +V Sbjct: 179 PHYDVSGLLAEYHIKDDSIASHERKQMLSMTRTMPEDQRELVQGLVNDMFERFLDVVKTG 238 Query: 197 R----NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 R P DK L+ G ++ +A ++GL+D VG Sbjct: 239 RPAYVEDP-DKLKELATGEVYLTDQAIELGLVDKVG 273 >gi|260757395|ref|ZP_05869743.1| clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella abortus bv. 4 str. 292] gi|260667713|gb|EEX54653.1| clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella abortus bv. 4 str. 292] Length = 708 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 8/146 (5%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ V+++K V V ++AAS GY+I Sbjct: 522 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 581 Query: 115 SCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A + I+A +S+VGSIGV+ F +P + L K+GV + + K PF Sbjct: 582 ALAGDEIIADPSSIVGSIGVVSASFGFPEL---LKKIGVERRVYTAGSNKVTLDPFQPEK 638 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESR 197 + ++ ++ + + F+ +V E R Sbjct: 639 AEDIERLKALQLEIHATFIDMVKERR 664 >gi|304413780|ref|ZP_07395224.1| S49 family peptidase [Candidatus Regiella insecticola LSR1] gi|304283871|gb|EFL92265.1| S49 family peptidase [Candidatus Regiella insecticola LSR1] Length = 348 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + G A + ++ + + V ++AAS GY+++C ++ +V+A + Sbjct: 136 VLLRLESPGGVVHGYGLAASQLVRLQQAGIHLTVAVDKIAASGGYMMACVADRVVSAPFA 195 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P +L K + I+ + K + F E + + ++ ++ ++ Sbjct: 196 IIGSIGVVAQIPNFNRWLRKNNIDIELHTAGEFKRTLTLFGENTEQGREKFREELNETHL 255 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + + + +P ++ G W G AK+ GL+D + +E+ Sbjct: 256 LFKQFIKQ--RLPQLDIDTVATGEHWFGITAKEKGLVDAIESSDEL 299 >gi|330445595|ref|ZP_08309247.1| peptidase S49 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489786|dbj|GAA03744.1| peptidase S49 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 353 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 4/126 (3%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + + + + K Sbjct: 176 VDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQLPNFNKLLKKNDIDYEQITAGEFKR 235 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 + F E KA + Q ++ ++ F V+ R ++ +K ++ G W G +A + Sbjct: 236 TLTMFGENTDKAREKFQTEIEETHSLFKNFVAFHRPDLDLEK---VATGEHWFGQQALDL 292 Query: 222 GLIDVV 227 GL+D + Sbjct: 293 GLVDQI 298 >gi|152981533|ref|YP_001354400.1| phage related peptidase [Janthinobacterium sp. Marseille] gi|151281610|gb|ABR90020.1| phage related peptidase [Janthinobacterium sp. Marseille] Length = 406 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 1/184 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 QEL ++ D + A+++ + S GG + + + RKPV ++MA SA Sbjct: 84 QELATMLDTAVADPNVAAILLDIDSAGGESGGVFDLADRVAAAAKRKPVWALANDMAFSA 143 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I A++ + T VGSIGV+ + K GV +V + K + +P + Sbjct: 144 AYAIGSAASRFIVTRTGGVGSIGVIAMHADQSVKDAKDGVRYTTVFAGARKNDLNPHEPI 203 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +A +++ V+ Y FV V+ +R + D ++ I+ GA+A GL D VG Sbjct: 204 SDEAHAFLKNEVERVYGLFVETVARNRGVSADAVRA-TEASIYYGADAVAAGLADAVGTF 262 Query: 231 EEVW 234 ++V Sbjct: 263 DDVL 266 >gi|254786154|ref|YP_003073583.1| periplasmic protease [Teredinibacter turnerae T7901] gi|237686261|gb|ACR13525.1| putative protease SohB [Teredinibacter turnerae T7901] Length = 353 Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 3/172 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG ++ + +++ + P+ V +AAS GY+++C ++ IV+A + Sbjct: 140 VVVRLESQGGMVHSYGFAASQLSRIREKNIPLTVCVDMVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K V + + + K + F E K Q + ++ ++ Sbjct: 200 ILGSIGVVAQLPNFHRLLKKHDVDYEMLTAGEYKRTLTMFGENTDKGRQKFVEDLEDTHT 259 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 F + +R I ++ G +W G A + L+D + ++ LY+ Sbjct: 260 LFKDFIRSNRAIV--DVDAVATGEVWFGQRALEAKLVDCIQTSDQYLVDLYS 309 >gi|209694710|ref|YP_002262638.1| putative periplasmic protease [Aliivibrio salmonicida LFI1238] gi|208008661|emb|CAQ78846.1| probable protease SohB [Aliivibrio salmonicida LFI1238] Length = 353 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + ++++ +T V ++AAS GY+++C I+AA + Sbjct: 141 VLLRLESGGGMVHGYGLASSQLDRLRDANITLTISVDKVAASGGYMMACIGEKIIAAPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + + + + + K + F E + KA + Q ++ ++ Sbjct: 201 IVGSIGVVAQLPNFSKLLKRNDIEFEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHV 260 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + E R ++ +K ++ G W G +A ++GLID + Sbjct: 261 LFKDFIHEHRADLDLEK---VATGEHWFGKQALELGLIDAI 298 >gi|327311349|ref|YP_004338246.1| protease IV [Thermoproteus uzoniensis 768-20] gi|326947828|gb|AEA12934.1| protease IV, putative [Thermoproteus uzoniensis 768-20] Length = 533 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 19/183 (10%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L+ I R++ D A +I+ + SPGG+ A EA++ A++ + KPV V + AS + Sbjct: 64 LLPYILRLNSSDVA-GIILYIDSPGGTLDATEALYGALKGLG--KPVYAVVSGLDASGAF 120 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE--PSPFSEV 170 +S A+ I A+ SLVG+IG + + P +V +P+ E PS + ++ Sbjct: 121 YVSMAAEKIYASPGSLVGNIGA---WAVINP----------AVFWTPIPLEIFPSGYEKL 167 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGG 229 ++ D VD + F+ +V +SR + + +L+ GR++T EA ++GLID +GG Sbjct: 168 FGMSLFGYYDSVDQAAASFLSVVLKSRGDRLNASADLLATGRLFTAQEALRIGLIDKIGG 227 Query: 230 QEE 232 + Sbjct: 228 LAD 230 >gi|330828722|ref|YP_004391674.1| putative protease sohB [Aeromonas veronii B565] gi|328803858|gb|AEB49057.1| Probable protease sohB [Aeromonas veronii B565] Length = 335 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + +Q++++R +T + ++AAS GY+++C ++ I+AA + Sbjct: 125 VLLRLESGGGVVHGYGLAASQLQRLRDRDIKLTVAIDKVAASGGYMMACVADKILAAPFA 184 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + K + F E + + ++ + + + Sbjct: 185 IVGSIGVIAQLPNFNKLLKKHDIEFEMHTAGQYKRTITMFGENDDLGREKFREELAAIHE 244 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V+E R + D+ ++ G W ++AK +GL+D + Sbjct: 245 RFKAFVAEHRPQLDIDQ---VTTGEHWLASQAKGLGLVDTL 282 >gi|260427805|ref|ZP_05781784.1| peptidase, family S49 [Citreicella sp. SE45] gi|260422297|gb|EEX15548.1| peptidase, family S49 [Citreicella sp. SE45] Length = 326 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 9/204 (4%) Query: 34 NSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P VA + ++G I Q L +E+ R A+ + ++SPGGS I Sbjct: 71 TKPTVAVVRMQGAIGTGGRMALSDQSLRPLLEKAFRKGKPAAVALEINSPGGSPVQSSLI 130 Query: 87 FRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ + + PV ++AAS GY I+ A++ I A +S++GSIGV+ F Sbjct: 131 GARIRRLSEETKVPVFAFTEDVAASGGYWIASAADEIWADPSSILGSIGVISAGFGAHVF 190 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ + + K+ PF + + V + ++ + F++ + R Sbjct: 191 LQRQGIERRVHTAGKSKSMLDPFRPESEEDVARLDRLLGQLHETFIQQIRSRRGDKLADD 250 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 L G +W G A VGL D VG Sbjct: 251 PDLFTGEVWIGKAACDVGLADGVG 274 >gi|149911384|ref|ZP_01900003.1| sohB protein, peptidase U7 family [Moritella sp. PE36] gi|149805559|gb|EDM65563.1| sohB protein, peptidase U7 family [Moritella sp. PE36] Length = 359 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 ++V L S GG + ++++K +T V ++AAS GY+++C ++ I+AA + Sbjct: 147 VLVRLESGGGVVHGYGLASSQLERLKQANIKLTIAVDKVAASGGYMMACIADHIIAAPFA 206 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + ++ + + K + F E + Q ++ ++ Sbjct: 207 IVGSIGVVAQIPNFNRLLKKNNIDVEQLTAGEFKRTLTMFGENDDAGRAKFQQELEETHV 266 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F VS R ++ +K ++ G W G A + GL+D + Sbjct: 267 LFKDFVSTHRPDMDIEK---IATGEHWFGTHAHERGLVDTL 304 >gi|320108129|ref|YP_004183719.1| peptidase S49 [Terriglobus saanensis SP1PR4] gi|319926650|gb|ADV83725.1| peptidase S49 [Terriglobus saanensis SP1PR4] Length = 248 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 11/182 (6%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPH---------VARIAIRGQIEDSQEL 53 F L I +ML+L+ V+ + S D+S + I + G I + L Sbjct: 32 FWLLIIGGSLLMLALLIAGTVWSTMQSLKADDSEENGIATSSKKIGVIEVTGVILTADTL 91 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAG 111 +++ +++ D A+I+ ++SPGG A A + +F + +++ + K +I + + AS Sbjct: 92 SQQMRKMAADSDVKAIILHINSPGGGAAASQELFNEVVRIRKESHKKIIASIESVGASGA 151 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ + I A + S+VGSIGV+ ++ L + ++K+ +K P ++ Sbjct: 152 YYIASGCDRIYANDASVVGSIGVIMEWTNYGELLRWAKLKNVTLKAGELKDAGDPTRDLT 211 Query: 172 PK 173 PK Sbjct: 212 PK 213 >gi|149377455|ref|ZP_01895198.1| Periplasmic serine protease (ClpP class) [Marinobacter algicola DG893] gi|149358296|gb|EDM46775.1| Periplasmic serine protease (ClpP class) [Marinobacter algicola DG893] Length = 354 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ + +T V ++AAS GY+++C ++ IVA+ + Sbjct: 141 VVIRLESGGGLVHSYGLAAAQLDRIRAKGIRLTACVDKVAASGGYMMACVADRIVASPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P FL K V + + + K + F E K + ++ ++ Sbjct: 201 ILGSIGVVAQLPNFHRFLKKNDVDFEILTAGEHKRTMTVFGENTDKGRTKFLEDLEDTHV 260 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V E R P +++G IW G A +V L+D + +E Sbjct: 261 LFKEYVGERR--PELDIAAVANGDIWFGRRALEVKLVDEIKTSDE 303 >gi|294141564|ref|YP_003557542.1| sohB protein, peptidase U7 family [Shewanella violacea DSS12] gi|293328033|dbj|BAJ02764.1| sohB protein, peptidase U7 family [Shewanella violacea DSS12] Length = 343 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 14/229 (6%) Query: 36 PHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 P V + +G I D+ E+ E IS + +IV++ S GG + + Sbjct: 96 PRVFVVDFKGSI-DASEVASLREEISAILAIAEKGDEVIVTVESGGGMVHGYGLASSQLD 154 Query: 92 KVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ +T V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K + Sbjct: 155 RLRQADIHLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQIPNFHKLLKKHDI 214 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 + + K + F E + Q ++ ++ F + +++ R + DK ++ Sbjct: 215 DYEQHTAGDFKRTLTLFGENTDEGRAKFQTELEETHVLFKQFIAKYRPELDLDK---VAT 271 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 G W G +A ++GLID + ++V + L ++++ K++ + KN+ Sbjct: 272 GEHWYGQQAIELGLIDGISTSDDV---VMKLAKERTVIKVR-YQLKKNF 316 >gi|289804822|ref|ZP_06535451.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 204 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 +V L SPGG + +Q+++++ P+ V ++AAS GY+++C + I+AA ++ Sbjct: 75 VVRLESPGGVVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAI 134 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ Q P FL + I+ + K + E + Q ++ ++ ++H Sbjct: 135 VGSIGVVAQIPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHL 194 Query: 189 FVRLVSESR 197 F V R Sbjct: 195 FKEFVQRMR 203 >gi|269102960|ref|ZP_06155657.1| putative sohB protein peptidase U7 family [Photobacterium damselae subsp. damselae CIP 102761] gi|268162858|gb|EEZ41354.1| putative sohB protein peptidase U7 family [Photobacterium damselae subsp. damselae CIP 102761] Length = 336 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 4/127 (3%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ I++A ++VGSIGV+ Q P L K + + + + K Sbjct: 159 VDKVAASGGYMMACVADKIISAPFAIVGSIGVIAQIPNFNKVLKKNDIEFEQITAGEFKR 218 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 + F E KA + + ++ ++ F ++ R + +K ++ G W G +A ++ Sbjct: 219 TLTMFGENTDKAREKFKLEIEETHGLFKDFIANHRPELDLNK---VATGEHWFGQQAFEL 275 Query: 222 GLIDVVG 228 GL+D +G Sbjct: 276 GLVDAIG 282 >gi|300024371|ref|YP_003756982.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] gi|299526192|gb|ADJ24661.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] Length = 277 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 5/176 (2%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+ V ++SPGGS +F+ I++ V+ +K V ++AAS GY ++ A + I A Sbjct: 49 AVAVIVNSPGGSPVQSNLLFKRIRQLAVEKKKRVYVFCEDVAASGGYFLAIAGDEIYADP 108 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +S++GSIGV+ + L+K+GV + + K + PF + V ++ + Sbjct: 109 SSIIGSIGVVSRSFGFVDLLEKIGVERRVYTAGINKNQLDPFLPEDADDVARLKAIQRDV 168 Query: 186 YHWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F+ LV E R + T + S G W+ A A + GL+D + Q ++ Sbjct: 169 HDIFIGLVKERRLGKLKAPDTELFS-GAFWSAARAVEFGLVDGITDIRSKMQDIFG 223 >gi|197285195|ref|YP_002151067.1| periplasmic protease [Proteus mirabilis HI4320] gi|227355620|ref|ZP_03840014.1| S49 family SohB endopeptidase [Proteus mirabilis ATCC 29906] gi|194682682|emb|CAR42830.1| probable protease [Proteus mirabilis HI4320] gi|227164227|gb|EEI49120.1| S49 family SohB endopeptidase [Proteus mirabilis ATCC 29906] Length = 348 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 3/165 (1%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV-HEMAASAGYLISCASNIIVA 123 + +++ L SPGG + + ++K++ +T V ++AAS GY+++C ++ IVA Sbjct: 132 AGDEVLLRLESPGGMVHGYGLAAAQLTRLKDKGIKLTAVVDKVAASGGYMMACVADKIVA 191 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P + L K + ++ + K + E + + + ++ Sbjct: 192 APFAIIGSIGVVAQIPNIHRLLKKNDIDVELHTAGEYKRTLTLLGENTDEGREKFKQDLN 251 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ F V + R P ++ G W G +A GLID VG Sbjct: 252 ETHLLFKSFVHKYR--PELDIDSVATGEYWYGTDAVDKGLIDEVG 294 >gi|156974266|ref|YP_001445173.1| hypothetical protein VIBHAR_01981 [Vibrio harveyi ATCC BAA-1116] gi|156525860|gb|ABU70946.1| hypothetical protein VIBHAR_01981 [Vibrio harveyi ATCC BAA-1116] Length = 450 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 92/182 (50%), Gaps = 2/182 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ R+ D A+++ +++PGG + I +++ KP+ + ++M SAG Sbjct: 104 IMHRLREAVADPEVKAMLLDMNTPGGMVAGCFDLADKIAEMRKIKPIWSLGYDMHCSAGQ 163 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +I+ A + + +T + GS+GV+ + ++ LD+ GV I V + KA+ +P+ + Sbjct: 164 MIASACSRRLITQTGIAGSVGVIMAHTNIEKMLDQQGVEITLVTAGDHKADGNPYQSLPR 223 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI-DVVGGQE 231 + + Q +S+ F +E + KT++ ++ +++ G A VG +VV G + Sbjct: 224 EVREKWQSEAESTRQMFAGKAAEYMGVDI-KTILSTEAQVYEGQAAVDVGFANEVVNGLD 282 Query: 232 EV 233 V Sbjct: 283 AV 284 >gi|153834991|ref|ZP_01987658.1| minor capsid protein C (GPC) [Vibrio harveyi HY01] gi|148868565|gb|EDL67658.1| minor capsid protein C (GPC) [Vibrio harveyi HY01] Length = 450 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 90/176 (51%), Gaps = 3/176 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ R+ D A+++ +++PGG + I +++ KP+ + ++M SAG Sbjct: 104 IMHRLREAVADPEVKAILLDMNTPGGMVAGCFDLADKIAEMRKIKPIWSLGYDMHCSAGQ 163 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +I+ A + + +T + GS+GV+ + ++ LD+ GV I V + KA+ +P+ + P Sbjct: 164 MIASACSRRLITQTGIAGSVGVIMAHTNIEKMLDQQGVEITLVTAGDHKADGNPYQSL-P 222 Query: 173 KAVQMM-QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 K V+ Q +S+ F +E + KT++ ++ +++ G A VG + V Sbjct: 223 KEVREKWQSEAESTRQMFAGKAAEYMGVDI-KTILSTEAQVYEGQAAVDVGFANEV 277 >gi|197335839|ref|YP_002155843.1| putative protease SohB [Vibrio fischeri MJ11] gi|197317329|gb|ACH66776.1| putative protease SohB [Vibrio fischeri MJ11] Length = 353 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + ++++ +T V ++AAS GY+++C I+AA + Sbjct: 141 VLLRLESGGGMVHGYGLASSQLDRLRDANIKLTISVDKVAASGGYMMACIGEKIIAAPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + + K + F E + KA + Q ++ ++ Sbjct: 201 IVGSIGVVAQLPNFNKLLKKNDIEFEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHV 260 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + E R+ + +K ++ G W G +A ++GLID Sbjct: 261 LFKDFICEHRSELDLEK---VATGEHWFGKQALELGLID 296 >gi|90581225|ref|ZP_01237023.1| putative sohB protein, peptidase U7 family [Vibrio angustum S14] gi|90437596|gb|EAS62789.1| putative sohB protein, peptidase U7 family [Vibrio angustum S14] Length = 353 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 4/126 (3%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + + + + K Sbjct: 176 VDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQLPNFNKVLKKNDIDYEQITAGEFKR 235 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 + F E KA + Q ++ ++ F ++ R ++ +K ++ G W G +A ++ Sbjct: 236 TLTMFGENTDKAREKFQMEIEETHGLFKNFIAAHRPDLDLEK---VATGEHWFGQQAFEL 292 Query: 222 GLIDVV 227 GL+D + Sbjct: 293 GLVDQI 298 >gi|91224322|ref|ZP_01259584.1| Putative capsid protein of prophage [Vibrio alginolyticus 12G01] gi|91190664|gb|EAS76931.1| Putative capsid protein of prophage [Vibrio alginolyticus 12G01] Length = 450 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 90/176 (51%), Gaps = 3/176 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ R+ D A+++ +++PGG + I +++ KP+ + ++M SAG Sbjct: 104 IMHRLREAVADPEVKAILLDMNTPGGMVAGCFDLADKIAEMRKIKPIWSLGYDMHCSAGQ 163 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +I+ A + + +T + GS+GV+ + ++ LD+ GV I V + KA+ +P+ + P Sbjct: 164 MIASACSRRLITQTGIAGSVGVIMAHTNIEKMLDQQGVEITLVTAGDHKADGNPYQSL-P 222 Query: 173 KAVQMM-QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 K V+ Q +S+ F +E + KT++ ++ +++ G A VG + V Sbjct: 223 KEVREKWQSEAESTRQMFAGKAAEYMGVDI-KTILSTEAQVYEGQAAVDVGFANEV 277 >gi|85705905|ref|ZP_01037001.1| peptidase, family S49 [Roseovarius sp. 217] gi|85669493|gb|EAQ24358.1| peptidase, family S49 [Roseovarius sp. 217] Length = 244 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 2/185 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IE+ A+ + ++SPGGS I I+++ K PV V ++AAS GY + Sbjct: 19 IEKAFSRGKPVAVALVINSPGGSPVQSSLIAARIRRLAEEKSIPVHAFVEDVAASGGYWL 78 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I +S++GSIGV+ FL + GV + + K+ PF P+ Sbjct: 79 AVAADDIWVDASSVLGSIGVISAGFGANEFLTRQGVERRIYTAGKSKSTLDPFMPEKPED 138 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 V ++ +++ + F+ V R L G W GA + ++GL D +G Sbjct: 139 VTRLKGILEDIHGAFITHVKSRRGSKLADDPDLFTGEFWLGARSIELGLADGIGHLVPKM 198 Query: 235 QSLYA 239 ++LY Sbjct: 199 KALYG 203 >gi|59711647|ref|YP_204423.1| putative periplasmic protease [Vibrio fischeri ES114] gi|59479748|gb|AAW85535.1| predicted inner membrane peptidase [Vibrio fischeri ES114] Length = 353 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + ++++ +T V ++AAS GY+++C I+AA + Sbjct: 141 VLLRLESGGGMVHGYGLASSQLDRLRDANIKLTISVDKVAASGGYMMACIGEKIIAAPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + + K + F E + KA + Q ++ ++ Sbjct: 201 IVGSIGVVAQLPNFNKLLKKNDIEFEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHV 260 Query: 188 WFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + E R+ + +K ++ G W G +A ++GLID Sbjct: 261 LFKDFIREHRSELDLEK---VATGEHWFGKQALELGLID 296 >gi|299769230|ref|YP_003731256.1| putative periplasmic protease [Acinetobacter sp. DR1] gi|298699318|gb|ADI89883.1| putative periplasmic protease [Acinetobacter sp. DR1] Length = 320 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 11/174 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I+AA Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAIVGSIGVVAQVPNFNRLLKQHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R + DK ++ G W G +A ++ L+D + +E +L Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGEDALELNLVDKLQTSDEYLLAL 261 >gi|288960112|ref|YP_003450452.1| serine protease [Azospirillum sp. B510] gi|288912420|dbj|BAI73908.1| serine protease [Azospirillum sp. B510] Length = 296 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 9/183 (4%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASN 119 +D A AL+V +SPGGS I + I+ + K PV + AAS GY ++CA++ Sbjct: 57 KDQKAVALVV--NSPGGSPVQSALIAKRIRDLAEEKKVPVFAFCEDAAASGGYWLACAAD 114 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV---Q 176 I A E+S++GSIGV+ + +++ G+ + + K PFS V + Sbjct: 115 EIWADESSILGSIGVVSSGFGLHGLIERHGIERRLYTAGDRKVLLDPFSPEREDGVAHLK 174 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +Q V ++ VR R ++ L G W G +A +GLID +G V + Sbjct: 175 ALQADVHEAFKAMVRSRRGDRLKGAEEDLF--SGAFWAGRKALALGLIDGLGDIRSVMRG 232 Query: 237 LYA 239 + Sbjct: 233 RFG 235 >gi|83593390|ref|YP_427142.1| peptidase S49 [Rhodospirillum rubrum ATCC 11170] gi|83576304|gb|ABC22855.1| Peptidase S49 [Rhodospirillum rubrum ATCC 11170] Length = 264 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 13/170 (7%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAI--FRAIQKVKNRKPVITEVHEMAASAGYLI 114 I+R R AL+++ SPGGS + I + IQ + +K VIT V ++AAS GY I Sbjct: 36 IDRAFRVGDEVALVIN--SPGGSPAQSQLIHDYIRIQADRRKKAVITFVEDVAASGGYWI 93 Query: 115 SCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 + A + I TSLVGSIGV+ + +V+ LD+LGV + V + K PFS + Sbjct: 94 ALAGDSIRVLPTSLVGSIGVVSAGFGFVEA-LDRLGVERRLVAAGRNKVRLDPFSPRKDE 152 Query: 174 AVQMMQDVVDSSYHWFV-----RLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + + + + F+ R ++ +P L G +W G EA Sbjct: 153 DTEWLTGLQAQLHERFIEHVRSRRAAQGTRLPEGGELF--TGEVWLGREA 200 >gi|323144853|ref|ZP_08079422.1| putative signal peptide peptidase SppA, 36K type [Succinatimonas hippei YIT 12066] gi|322415378|gb|EFY06143.1| putative signal peptide peptidase SppA, 36K type [Succinatimonas hippei YIT 12066] Length = 379 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +IV+L+SPGG + + ++++R +T V +AAS GYL++ ++ IVAA S Sbjct: 158 VIVNLTSPGGMVNSYGLCASQLARIRDRGIKLTCTVDSVAASGGYLMASVADHIVAAPFS 217 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +GSIGV+ P + LDK V + + + K S E + + ++ +++ + Sbjct: 218 YIGSIGVIAGIPNFRKVLDKYDVEYEQITAGKYKRTLSMLGENTQEGRKKFKEELEAIHA 277 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V + R P+ ++ G W ++A K+ L+D + +E Sbjct: 278 RFKEQVQKYR--PFINIDEVATGEYWLASDALKLKLVDEIATSDE 320 >gi|239814389|ref|YP_002943299.1| peptidase S49 [Variovorax paradoxus S110] gi|239800966|gb|ACS18033.1| peptidase S49 [Variovorax paradoxus S110] Length = 347 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 10/204 (4%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + H A + I+G+I + + ++ ++ D+ A +++ ++SPGGS I Sbjct: 93 TTAHTAVVEIKGEIANGGDASAEFVVAAMKTAFEDEGAKGIVLLINSPGGSPVQAGIISD 152 Query: 89 AIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ K K++KP+ V E ASA Y I+ A++ I + S+VGSIGVL ++ Sbjct: 153 EIKRLKAKHKKPIYAVVEETCASAAYYIAAATDKIFVDKASIVGSIGVLMDGFGFTGVME 212 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKT 204 K+GV + + + K PFS ++ Q +++ + F+ +V R + D T Sbjct: 213 KVGVERRLLTAGENKGFLDPFSPMSDAQRAHAQAMLNQIHTQFINVVKNGRGDRLKLD-T 271 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVG 228 L G W+G +A + GL D +G Sbjct: 272 PGLFSGLFWSGEQAVEFGLADQLG 295 >gi|77919415|ref|YP_357230.1| periplasmic serine proteases [Pelobacter carbinolicus DSM 2380] gi|77545498|gb|ABA89060.1| protein C, Serine peptidase, MEROPS family S49 [Pelobacter carbinolicus DSM 2380] Length = 383 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 1/165 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DD+ +I + SPGG + I + + +KP+ V+E SA Y ++ A++ I+ Sbjct: 102 DDAVRRIIFDVDSPGGEVTGCFDLADHIYQSRGKKPITAVVNESCYSAAYALASAADKII 161 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T GSIGV+ + F +K G+++ + + KA+ SP ++ +A +Q +V Sbjct: 162 LPRTGGAGSIGVILAHVDQSGFNEKNGLAVTHIFAGAHKADFSPHHALSEEAKTRLQGMV 221 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +Y FV VS +RN+ + + ++ I+ G++A GL D V Sbjct: 222 NETYSLFVSTVSRNRNMSAE-AVRKTEACIYIGSKAVAAGLADQV 265 >gi|114319494|ref|YP_741177.1| putative periplasmic protease [Alkalilimnicola ehrlichii MLHE-1] gi|114225888|gb|ABI55687.1| inner membrane peptidase [Alkalilimnicola ehrlichii MLHE-1] Length = 332 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 15/177 (8%) Query: 57 IERISRDDSATALIVSLSSPGGS--AYAGEAIFRAIQKVKNRK---PVITEVHEMAASAG 111 + R RD A+++ L S GG+ Y A Q + R+ P+ + +AAS G Sbjct: 120 MARAERD----AVLLRLDSQGGTVPGYG----LAASQLARLREAGIPLTVSIDRVAASGG 171 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 YL++C ++ IVAA ++VGSIGV+ P FL + + + + K S F E Sbjct: 172 YLMACVADRIVAAPFAVVGSIGVIGALPNFNRFLRRHDIDFEQHTAGEWKRTLSLFGENT 231 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +A + + ++S + F + R P ++ G W EA +GL+D +G Sbjct: 232 DEAREKFRQDLESVHRHFKGFIQRYR--PALDLDQVATGEYWLAEEALGLGLVDELG 286 >gi|70731028|ref|YP_260769.1| putative periplasmic protease [Pseudomonas fluorescens Pf-5] gi|68345327|gb|AAY92933.1| peptidase, U7 family [Pseudomonas fluorescens Pf-5] Length = 344 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C I++A + Sbjct: 131 VVLRLESGGGMVHSYGLASSQLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFA 190 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +D ++ Sbjct: 191 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDVTHQ 250 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F VS R + D+ ++ G +W G A++ L+D Sbjct: 251 LFKNFVSRYRPQLAIDE---VATGEVWLGVAAQEKLLVD 286 >gi|303235964|ref|ZP_07322567.1| peptidase, S49 (protease IV) family protein [Prevotella disiens FB035-09AN] gi|302483837|gb|EFL46829.1| peptidase, S49 (protease IV) family protein [Prevotella disiens FB035-09AN] Length = 330 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++L E +++ + T + +++PGG A+ + + ++ KP+IT ++ S Sbjct: 120 SKQLEEDLKQAENNPQITCHFLHINTPGGEAWYMDRLSETLRNC--NKPIITLCEQLCCS 177 Query: 110 AGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 AGY I C + + ++G IG + + + + KLG++ K++ + F Sbjct: 178 AGYYIGCHGQRVYGLTQNDMIGCIGTMCSFYDFEEYYKKLGITKVEAKATNSDLKNKMFD 237 Query: 169 EVNP-KAVQMMQDVVDSSYHWFVRLVSESRNI---PYDKTLVLSDGRIWTGAEAKKVGLI 224 ++ K+ Q +++V++ F+ V E R D VL G + +EA+KVGLI Sbjct: 238 DLRKGKSEQYVREVLNPLCAQFLTEVREQRKALASLADDAPVLR-GETFLSSEAEKVGLI 296 Query: 225 D 225 D Sbjct: 297 D 297 >gi|325122976|gb|ADY82499.1| putative protease (SohB) [Acinetobacter calcoaceticus PHEA-2] Length = 318 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I+AA Sbjct: 94 IVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAIVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGEDALDLNLVDKLQTSDEYLLAL 261 >gi|226952528|ref|ZP_03822992.1| protease SohB [Acinetobacter sp. ATCC 27244] gi|294649823|ref|ZP_06727225.1| protease SohB [Acinetobacter haemolyticus ATCC 19194] gi|226836710|gb|EEH69093.1| protease SohB [Acinetobacter sp. ATCC 27244] gi|292824306|gb|EFF83107.1| protease SohB [Acinetobacter haemolyticus ATCC 19194] Length = 320 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 15/213 (7%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R V V ++AAS GY+++C ++ I++A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHVTICVDKVAASGGYMMACIASEIISA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + K + F E P+ ++ + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKQHHVDFDLYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 ++ F + + R P ++ G W G +A+++ L+D + +E Y LG+ Sbjct: 211 THVLFKHFIEKYR--PQLDVEKVATGEHWYGEDARQLNLVDKLQTSDE-----YLLGL-L 262 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 S + N K F + L + + E+ IP Sbjct: 263 SQHDVYVINTRKRPTFGEKLGLQAAQMAENLIP 295 >gi|226944831|ref|YP_002799904.1| putative periplasmic protease [Azotobacter vinelandii DJ] gi|226719758|gb|ACO78929.1| Peptidase, S49 family [Azotobacter vinelandii DJ] Length = 342 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 21/186 (11%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 +++ L S GG ++ G A A Q V+ R+ P+ V ++AAS GY+++C + I++A Sbjct: 129 VVLRLESGGGLVHSYGLA---ASQLVRIRQAGVPLTVCVDKVAASGGYMMACIGDRILSA 185 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +++GSIGV+ Q P V L + + + + + K + F E K + Q+ +++ Sbjct: 186 PFAILGSIGVVAQLPNVHRLLKRHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLET 245 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV----------GGQEEV 233 ++ F V+ R + D+ ++ G IW G A + L+D + G E+ Sbjct: 246 THELFKNFVARYRPQLTIDE---IATGEIWLGQSALEKQLVDELMTSDEYLAAKAGSAEL 302 Query: 234 WQSLYA 239 +Q YA Sbjct: 303 FQLHYA 308 >gi|119503274|ref|ZP_01625358.1| Cell surface receptor IPT/TIG [marine gamma proteobacterium HTCC2080] gi|119460920|gb|EAW42011.1| Cell surface receptor IPT/TIG [marine gamma proteobacterium HTCC2080] Length = 360 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 5/173 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG ++ +Q++++ +T V ++AAS GY+++C + I++A + Sbjct: 147 VLLCLESPGGMVHSYGLAASQLQRIRSTGATLTVAVDKVAASGGYMMACVGDRIISAPFA 206 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE-VNPKAVQMMQDVVDSSY 186 ++GSIGVL Q P L K V + + + K + F E + + ++D+ D +Y Sbjct: 207 VIGSIGVLAQLPNFHRLLKKNDVDFELLTAGKYKRTLTMFGENTDDGRAKFVEDLED-TY 265 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 F V+ +R P ++ G IW G A L+D + + Q+ A Sbjct: 266 DLFKDFVAINR--PVVDIDSVATGEIWYGQRAVDQNLVDELSTSDAYLQTRLA 316 >gi|54309644|ref|YP_130664.1| putative periplasmic protease [Photobacterium profundum SS9] gi|46914082|emb|CAG20862.1| putative sohB protein, peptidase U7 family [Photobacterium profundum SS9] Length = 353 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L + GG + + ++K+ +T V ++AAS GY+++C ++ I++A + Sbjct: 141 VLLRLETGGGMVHGYGLASSQLDRLKSAGIKLTISVDKVAASGGYMMACVADKIISAPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + + K + F E KA Q ++ ++ Sbjct: 201 IVGSIGVIAQLPNFSKVLKKHDIEFEQITAGEFKRTLTMFGENTDKARDKFQVEIEETHG 260 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F ++ R P ++ G W G +A +GL+D +G Sbjct: 261 LFKDFIAIHR--PELDLEKVATGEHWFGNQALNLGLVDEIG 299 >gi|293609754|ref|ZP_06692056.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828206|gb|EFF86569.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 320 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I+AA Sbjct: 94 IVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAIVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGEDALDLNLVDKLQTSDEYLLAL 261 >gi|256822003|ref|YP_003145966.1| putative periplasmic protease [Kangiella koreensis DSM 16069] gi|256795542|gb|ACV26198.1| Peptidase S49 domain protein [Kangiella koreensis DSM 16069] Length = 384 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 86/166 (51%), Gaps = 3/166 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG ++ ++++++ +T V E+AAS GY+++C ++ ++AA + Sbjct: 170 VMIRLESPGGLVHSYGLAASQLKRIRDAGLKLTISVDEVAASGGYMMACVADELIAAPFA 229 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ + P L K + + + K + F + + + + ++ ++ Sbjct: 230 ILGSIGVVAEIPNFNRLLQKANIDYEQHTAGQHKRTLTMFGQNTTASREKFKQELEETHQ 289 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 F + E+R P ++ G W G +A ++GL+D + ++V Sbjct: 290 LFKAFIHENR--PALDLNKVATGEHWYGRQALELGLVDKLQTSDDV 333 >gi|89074059|ref|ZP_01160560.1| putative sohB protein, peptidase U7 family protein [Photobacterium sp. SKA34] gi|89050197|gb|EAR55708.1| putative sohB protein, peptidase U7 family protein [Photobacterium sp. SKA34] Length = 353 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 4/126 (3%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K + + + + K Sbjct: 176 VDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQLPNFNKVLKKNDIDYEQITAGEFKR 235 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 + F E KA + Q ++ ++ F ++ R ++ +K ++ G W G +A + Sbjct: 236 TLTMFGENTDKAREKFQMEIEETHGLFKNFIAAHRPDLDLEK---VATGEHWFGQQAFDL 292 Query: 222 GLIDVV 227 GL+D + Sbjct: 293 GLVDQI 298 >gi|260576443|ref|ZP_05844433.1| peptidase S49 [Rhodobacter sp. SW2] gi|259021326|gb|EEW24632.1| peptidase S49 [Rhodobacter sp. SW2] Length = 266 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 3/189 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IER A+ + ++SPGGSA I I+++ K PV V ++AAS GY + Sbjct: 42 IERAFSRGKPKAVALVINSPGGSAVQSSLIAARIRRLSKEKKVPVHAFVEDVAASGGYWL 101 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ I ++S+VGSIGV+F + + GV + + K+ PF P+ Sbjct: 102 ACAADHIWVDDSSIVGSIGVIFASFGFPELMKRQGVERRVHTAGRSKSLADPFLPEKPED 161 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + + + F+ V R + L + +W G +A +GL D V Sbjct: 162 AARLLALAAPIHQAFIAHVKARRGARLAEA-DLFNADVWVGQQAVDLGLADGVAHLVPKL 220 Query: 235 QSLYALGVD 243 ++LY VD Sbjct: 221 KALYGDKVD 229 >gi|285017031|ref|YP_003374742.1| hypothetical protein XALc_0210 [Xanthomonas albilineans GPE PC73] gi|283472249|emb|CBA14755.1| hypothetical phage-related protein [Xanthomonas albilineans] Length = 433 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ ++SPGG A + + I KP+ ASA Y + A++ IV +T+ Sbjct: 99 AIVLDINSPGGEATGINELAKLIHAGSACKPIKAYAGGTMASAAYWLGAAADEIVIDDTA 158 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE----PSPFSEVNPKAVQ---MMQD 180 ++GSIGV+ Y L S + KS + E SP V+P + +Q Sbjct: 159 VLGSIGVVMSY---------LDTSARDAKSDVRRVEIVSSQSPDKRVDPSTDEGRAKVQA 209 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 VD+ FV V+ RN D VLSD G + GA+A K G+ D +G E V L Sbjct: 210 QVDALADVFVAAVARYRNTSTDT--VLSDFGRGGVRVGADAVKAGMADRIGSLESVIAEL 267 >gi|190573850|ref|YP_001971695.1| putative head-tail preconnector protein [Stenotrophomonas maltophilia K279a] gi|190011772|emb|CAQ45392.1| putative head-tail preconnector protein [Stenotrophomonas maltophilia K279a] Length = 402 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 1/187 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 QEL +++ D S A+++ + SPGG + + ++ KPV ++MA SA Sbjct: 84 QELATQLDAAIADPSVAAIVLDIDSPGGESGGVFDLADRVRAAARIKPVWALANDMAYSA 143 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y + A+N T VGSIGV+ + + GV +V + K + +P + Sbjct: 144 AYALGSAANRFFVTRTGGVGSIGVIAMHADQSVRDAQDGVRYTTVFAGARKNDLNPHEPI 203 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +A ++ VD Y FV V+ R + D G ++ G +A GL D VG Sbjct: 204 SDEAHAFLKSEVDRIYSLFVDTVASHRGLTGDAVRATEAG-VFFGQDAVAAGLADAVGTF 262 Query: 231 EEVWQSL 237 +++ L Sbjct: 263 DDLLAEL 269 >gi|229577462|ref|YP_001172741.2| putative periplasmic protease [Pseudomonas stutzeri A1501] Length = 340 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + G A + ++ P+ V ++AAS GY+++C N I+ A + Sbjct: 126 VVLRLESGGGMVHGYGLAASQLVRIRDAGVPLTVCVDKVAASGGYMMACIGNRILTAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + F E K + Q+ +++++ Sbjct: 186 ILGSIGVVAQLPNVHRLLKKHDVDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHE 245 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R N+ D ++ G +W G A L D Sbjct: 246 LFKNFVARYRQNLSIDD---VATGEVWLGIAALGKHLAD 281 >gi|262372062|ref|ZP_06065341.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] gi|262312087|gb|EEY93172.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] Length = 320 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R V V ++AAS GY+++C +N I+ A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFNVTICVDKVAASGGYMMACIANEIITA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKQHNVDFELYTAGEYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R P ++ G W G +A + L+D + +E SL Sbjct: 211 THSLFKHFVEKYR--PQLDISKVATGEHWYGEDALALNLVDKLQTSDEYLLSL 261 >gi|92114061|ref|YP_573989.1| putative periplasmic protease [Chromohalobacter salexigens DSM 3043] gi|91797151|gb|ABE59290.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Chromohalobacter salexigens DSM 3043] Length = 349 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 ++V L+S GG +A + ++++ +T V ++AAS GY+++C ++ ++AA + Sbjct: 134 VVVRLTSGGGLVHAYGLASAQLDRLRDAGVRLTVCVDKVAASGGYMMACCAHRLIAAPFA 193 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + ++ + + K + E + + + ++ Sbjct: 194 VIGSIGVVAQVPNVHRLLKKHDIDVELLTAGRYKRTLTVLGENTEEGRAKFLEDLRETHD 253 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F R V E R P ++ G IW G +A GLID V Sbjct: 254 LFKRYVGERR--PALDIEKVATGEIWYGRQALDDGLIDEV 291 >gi|145570793|gb|ABP79899.1| probable protease [Pseudomonas stutzeri A1501] Length = 360 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + G A + ++ P+ V ++AAS GY+++C N I+ A + Sbjct: 146 VVLRLESGGGMVHGYGLAASQLVRIRDAGVPLTVCVDKVAASGGYMMACIGNRILTAPFA 205 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K V + + + K + F E K + Q+ +++++ Sbjct: 206 ILGSIGVVAQLPNVHRLLKKHDVDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHE 265 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R N+ D ++ G +W G A L D Sbjct: 266 LFKNFVARYRQNLSIDD---VATGEVWLGIAALGKHLAD 301 >gi|262278270|ref|ZP_06056055.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] gi|262258621|gb|EEY77354.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] Length = 320 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 11/176 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I+ A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIITA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAIVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ F V + R + DK ++ G W G +A + L+D + +E +L A Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGEDALNLNLVDKLQTSDEYLLALLA 263 >gi|301306894|ref|ZP_07212941.1| peptidase, S49 family protein [Escherichia coli MS 124-1] gi|300837903|gb|EFK65663.1| peptidase, S49 family protein [Escherichia coli MS 124-1] Length = 239 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 73/142 (51%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ + D +++ + +PGG I +V++ KPV ++M SAG Sbjct: 97 IIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQ 156 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 157 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 216 Query: 173 KAVQMMQDVVDSSYHWFVRLVS 194 + +Q +D++ F + VS Sbjct: 217 DVRETLQSRMDATRQMFAQKVS 238 >gi|90412193|ref|ZP_01220199.1| putative sohB protein, peptidase U7 family protein [Photobacterium profundum 3TCK] gi|90326917|gb|EAS43302.1| putative sohB protein, peptidase U7 family protein [Photobacterium profundum 3TCK] Length = 353 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L + GG + + ++K+ +T V ++AAS GY+++C ++ I++A + Sbjct: 141 VLLRLETGGGMVHGYGLASSQLDRLKSAGIKLTISVDKVAASGGYMMACVADKIISAPFA 200 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K + + + + K + F E KA Q ++ ++ Sbjct: 201 IVGSIGVIAQLPNFSKVLKKNDIEFEQITAGEFKRTLTMFGENTDKARDKFQVEIEETHG 260 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F ++ R P ++ G W G +A +GL+D +G Sbjct: 261 LFKDFIAIHR--PELDLEKVATGEHWFGNQALNLGLVDEIG 299 >gi|221134638|ref|ZP_03560941.1| putative periplasmic protease [Glaciecola sp. HTCC2999] Length = 371 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 7/194 (3%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVA 123 S+ ++V++ S GG + ++++K + +T V ++AAS GY+++C ++ +V Sbjct: 155 SSDEVLVNVESGGGVVHGYGLAASQLERIKAKGLKLTICVDKVAASGGYMMACVADKLVC 214 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +++GSIGV+ Q P L K + + + K + F E N + + ++ Sbjct: 215 ANFAIIGSIGVIAQMPNFNKLLKKNDIEFEQHTAGDFKRTLTVFGENNDEGRAKFKAELE 274 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + F V +RN P ++ G W G +A ++GL+D + ++V L A Sbjct: 275 EVHVMFKDFV--TRNRPTLDISKVATGEYWFGMQALELGLVDELSTSDDV---LLAFNQT 329 Query: 244 QSIRKIKDWNPPKN 257 + IK ++ KN Sbjct: 330 HDVFGIK-YSEKKN 342 >gi|42523650|ref|NP_969030.1| putative periplasmic protease [Bdellovibrio bacteriovorus HD100] gi|39575857|emb|CAE80023.1| SohB protein, peptidase U7 family [Bdellovibrio bacteriovorus HD100] Length = 339 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++V + SPGG + G A + ++ + P+ V ++AAS GYL+S +N I+ A + Sbjct: 126 VVVRVESPGGVVHGYGLAASQLLRIREKGIPLTVCVDKVAASGGYLMSVTANKILCAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P + L K V K + K S E+ K + + ++ ++ Sbjct: 186 IVGSIGVVAQLPNLHRLLKKHDVDYKEYTAGEFKRTVSLLGEITDKGEEKFKQQLEDTHT 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F VS R P ++ G W G +A L+D Sbjct: 246 LFKSFVSRFR--PQLNLAEVATGEYWYGEQALTKLLVD 281 >gi|269138901|ref|YP_003295602.1| predicted inner membrane peptidase [Edwardsiella tarda EIB202] gi|267984562|gb|ACY84391.1| predicted inner membrane peptidase [Edwardsiella tarda EIB202] gi|304558887|gb|ADM41551.1| Putative protease SohB [Edwardsiella tarda FL6-60] Length = 348 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAET 126 ++++ L SPGG + +++++ +T V ++AAS GY+++C ++ IVAA Sbjct: 135 SVLLRLESPGGVVHGYGLAASQLKRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPF 194 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +++GSIGV+ Q P +L K V ++ + K + F E + +D ++ Sbjct: 195 AIIGSIGVVAQIPNFNRWLKKNDVDVELHTAGEFKRTLTLFGENTDAGREKFCQELDETH 254 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + V R P ++ G W G +A + GL+D + Sbjct: 255 LLFKQFVQRQR--PSLDVDSVATGEHWYGEQALEKGLVDAL 293 >gi|146307553|ref|YP_001188018.1| putative periplasmic protease [Pseudomonas mendocina ymp] gi|145575754|gb|ABP85286.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Pseudomonas mendocina ymp] Length = 339 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + ++++ P+ V ++AAS GY+++C I+AA + Sbjct: 126 VVLRLESGGGMVHSYGLASSQLVRIRDAGIPLTVCVDKVAASGGYMMACIGQKILAAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ + +++ Sbjct: 186 ILGSIGVVAQLPNVHRLLKKHDIDFEVLTAGEYKRTLTIFGENTEKGREKFQEDLQTTHD 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R P ++ G +W G A++ L+D Sbjct: 246 LFKGFVARYR--PQLDIDAIATGEVWLGMAAQERLLVD 281 >gi|299530356|ref|ZP_07043781.1| phage minor capsid protein C, putative [Comamonas testosteroni S44] gi|298721727|gb|EFI62659.1| phage minor capsid protein C, putative [Comamonas testosteroni S44] Length = 314 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 86/163 (52%), Gaps = 1/163 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DD+ + + + SPGGSA + I ++ KP+ V+ SA Y ++ A+N IV Sbjct: 112 DDAVEHVALDVDSPGGSATGMTDLAEEIFAARSIKPITAIVNFSCYSAAYGLASAANEIV 171 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +++S VGSIGV+ ++ + ++ G+ + ++ + KA+ + + ++ +A Q + ++V Sbjct: 172 LSKSSGVGSIGVIARHVDMSKRYEEQGIKVTTIFAGARKADLASDAPLSTEAAQWLNELV 231 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +Y F LV+ +R + G ++ G + ++GL D Sbjct: 232 QQNYAEFTELVARNRGLTVAAVRGTEAG-VYFGGKGIELGLAD 273 >gi|104781391|ref|YP_607889.1| putative periplasmic protease [Pseudomonas entomophila L48] gi|95110378|emb|CAK15086.1| putative peptidase, S49 family [Pseudomonas entomophila L48] Length = 338 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 3/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C IV+A + Sbjct: 127 VVLRLESGGGLVHSYGLAASQLARIREAGVPLTICIDKVAASGGYMMACIGEKIVSAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +D ++ Sbjct: 187 VLGSIGVVAQMPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTDKGREKFQEDLDITHQ 246 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R P ++ G +W G A L+D +G +E Sbjct: 247 LFKDFVARYR--PQLHIDEVATGEVWLGIAALNRQLVDELGTSDE 289 >gi|255088643|ref|XP_002506244.1| predicted protein [Micromonas sp. RCC299] gi|226521515|gb|ACO67502.1| predicted protein [Micromonas sp. RCC299] Length = 342 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 7/156 (4%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ +VA+ +++GSIGV+ + P V L K GV ++V + K Sbjct: 80 VEQVAASGGYMMACTADRLVASPFAVLGSIGVISEIPNVYERLKKEGVEFQTVTAGKFKR 139 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 +P ++ V+ + ++ F V + R + D+ ++ G W GA+A K Sbjct: 140 TLTPTKKIEKADVEKSKADIEDVLTLFKTFVKQQRPKLVIDE---VATGETWFGADALKR 196 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L D + ++V L A G + I +K + PP++ Sbjct: 197 DLCDELKTTDDVLLELLAAG--REIFSVK-YRPPQS 229 >gi|71733789|ref|YP_274809.1| periplasmic protease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487854|ref|ZP_05641895.1| putative periplasmic protease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71554342|gb|AAZ33553.1| peptidase, U7 family [Pseudomonas syringae pv. phaseolicola 1448A] gi|320328970|gb|EFW84969.1| putative periplasmic protease [Pseudomonas syringae pv. glycinea str. race 4] gi|330985296|gb|EGH83399.1| putative inner membrane peptidase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008563|gb|EGH88619.1| putative inner membrane peptidase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 340 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F VS R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVSSYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|241668941|ref|ZP_04756519.1| putative periplasmic protease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877473|ref|ZP_05250183.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843494|gb|EET21908.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 338 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 13/159 (8%) Query: 73 LSSPGG--SAYAGEAIFRAIQKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETS 127 + SPGG + Y F A Q + R+ IT + ++AAS GY++S +N I+AA + Sbjct: 133 IDSPGGVVNGYG----FAAAQLERIRQAGITLTVCIDQVAASGGYMMSAVANKIIAAPFA 188 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ P ++ L+K G++++ S K + E + + + +++ + Sbjct: 189 IVGSIGVVGTVPNIRELLEKNGINVEMHTSGEFKRTLTTVGENTEEGRKKFKQDLENIHE 248 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + + R N+ K ++ G W G +A ++GL+D Sbjct: 249 LFKKHILAYRPNLDMHK---VATGEYWFGKDALELGLVD 284 >gi|312961376|ref|ZP_07775881.1| peptidase S49 [Pseudomonas fluorescens WH6] gi|311285034|gb|EFQ63610.1| peptidase S49 [Pseudomonas fluorescens WH6] Length = 342 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C I++A + Sbjct: 129 VVLRLESGGGMVHSYGLASSQLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFA 188 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +D ++ Sbjct: 189 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQ 248 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F VS R + D+ ++ G +W G A L+D + +E Sbjct: 249 LFKNFVSRYRPQLAIDE---VATGEVWLGVAALDKQLVDELQTSDE 291 >gi|223993391|ref|XP_002286379.1| hypothetical protein THAPSDRAFT_261093 [Thalassiosira pseudonana CCMP1335] gi|220977694|gb|EED96020.1| hypothetical protein THAPSDRAFT_261093 [Thalassiosira pseudonana CCMP1335] Length = 185 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 9/172 (5%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT---EVHEMAASAGYLISCAS--NIIVA 123 +++ L SPGG+ + +++N +P IT V +AAS GY+++C + + A Sbjct: 2 ILLLLDSPGGTVQDYGLASSHLARLRN-EPHITLSVCVDRVAASGGYMMACQATPGQLFA 60 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A ++VGSIGVL + L K GV +K+ KA EV + ++M Q D Sbjct: 61 APFAMVGSIGVLMETINFNDVLKKYGVKPLVIKAGKNKAPLKTLGEVTNEELKMAQSDAD 120 Query: 184 SSYHWFVRLVSESR-NIPYDKTLV--LSDGRIWTGAEAKKVGLIDVVGGQEE 232 + F V +SR N+ K + + G ++ G EA+++GLID V +E Sbjct: 121 VIHKAFQDWVLQSRPNVVVSKGWIEKVCTGSVFLGKEARELGLIDRVMTSDE 172 >gi|260549707|ref|ZP_05823924.1| periplasmic serine protease [Acinetobacter sp. RUH2624] gi|260407224|gb|EEX00700.1| periplasmic serine protease [Acinetobacter sp. RUH2624] Length = 320 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + + ++++ ++T V ++AAS GY+++C +N I++A + Sbjct: 94 VVVRLESPGGMVHGYGLAAAQLVRLRDAGFLLTICVDKVAASGGYMMACIANEIISAPFA 153 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L + V + + K + F E P+ ++ + ++ Sbjct: 154 VVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHI 213 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 214 LFKHFVEKYRPQLNVDK---VATGEHWYGQDALDLNLVDKLQTSDEYLLAL 261 >gi|167626504|ref|YP_001677004.1| periplasmic protease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596505|gb|ABZ86503.1| peptidase, S49 (protease IV) family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 338 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 13/159 (8%) Query: 73 LSSPGG--SAYAGEAIFRAIQKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETS 127 + SPGG + Y F A Q + R+ IT + ++AAS GY++S +N I+AA + Sbjct: 133 IDSPGGVVNGYG----FAAAQLERIRQAGITLTVCIDQVAASGGYMMSVVANKIIAAPFA 188 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ P ++ L+K G++++ S K + E + + + +++ + Sbjct: 189 IVGSIGVVGTVPNIRELLEKNGINVEMHTSGEFKRTLTTVGENTEEGRKKFKQDLENIHE 248 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + + R N+ K ++ G W G +A ++GL+D Sbjct: 249 LFKKHILAYRPNLDMHK---VATGEYWFGKDALELGLVD 284 >gi|229590082|ref|YP_002872201.1| putative periplasmic protease [Pseudomonas fluorescens SBW25] gi|229361948|emb|CAY48848.1| putative peptidase [Pseudomonas fluorescens SBW25] Length = 341 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C I++A + Sbjct: 128 VVLRLESGGGMVHSYGLASSQLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFA 187 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +D ++ Sbjct: 188 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQ 247 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F VS R + D ++ G +W G A L+D + +E Sbjct: 248 LFKNFVSRYRPQLAIDD---VATGEVWLGVAALDKQLVDELQTSDE 290 >gi|238919608|ref|YP_002933123.1| periplasmic protease [Edwardsiella ictaluri 93-146] gi|238869177|gb|ACR68888.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 348 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAET 126 ++++ L SPGG + +++++ +T V ++AAS GY+++C ++ IVAA Sbjct: 135 SVLLRLESPGGVVHGYGLAASQLKRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPF 194 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +++GSIGV+ Q P +L K V ++ + K + F E + +D ++ Sbjct: 195 AIIGSIGVVAQIPNFNRWLKKNDVDVELHTAGEFKRTLTLFGENTDVGREKFCQELDETH 254 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F + V R P ++ G W G +A + GL+D + Sbjct: 255 LLFKQFVQRQR--PSLDVDSVATGEHWYGEQALEKGLVDAL 293 >gi|219121417|ref|XP_002185933.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582782|gb|ACI65403.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 165 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 2/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE--VHEMAASAGYLISCASNIIVAAET 126 +I+S++SPGGS + I+++ N + T V AAS GY+I+ ++ IVAA Sbjct: 1 VILSVNSPGGSVASYGLASAQIERLANVVGITTTACVDRYAASGGYMIASQAHRIVAAPF 60 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + VGS+GV+ + + GV +K+ K + F V+ + ++ + ++ + Sbjct: 61 ASVGSVGVIMEGLNFHDLAKRYGVQPMILKAGNEKNPLTTFGSVSKQDLKHETERLEKVH 120 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F +LV R DK +++G ++ G EA ++GL+D V Sbjct: 121 DAFRQLVVRGRPELADKLDEVANGNVFLGLEAVELGLVDAV 161 >gi|239501142|ref|ZP_04660452.1| putative periplasmic protease [Acinetobacter baumannii AB900] Length = 320 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I++A Sbjct: 94 IVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGQDALDLNLVDKLQTSDEYLLAL 261 >gi|163804098|ref|ZP_02197885.1| protease IV [Vibrio sp. AND4] gi|159172087|gb|EDP57039.1| protease IV [Vibrio sp. AND4] Length = 160 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 +++ IVA T+L GSIG+ + +KLG+S V +SP + + ++ A Q Sbjct: 2 SADKIVAQPTTLTGSIGIFSVITTFEKGFNKLGISTDGVGTSPFSGDGIT-TGLSDGASQ 60 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Q ++ Y F+ LV +R + ++ ++ GR+WTG +A GL+D +G Sbjct: 61 AFQLGIEHGYKRFISLVGSNREMSLEEVDKVAQGRVWTGQDAMSFGLVDQMG 112 >gi|228962557|ref|YP_751249.2| putative periplasmic protease [Shewanella frigidimarina NCIMB 400] Length = 336 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAAS 109 QE+ I +DD ++V++ S GG + + +++ P+ V ++AAS Sbjct: 111 QEVTAIITIADKDDQ---VLVNVESGGGMVHGYGLASSQLDRLRQANIPLSICVDKVAAS 167 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+++C +N + AA ++VGSIGV+ Q P L + + + K + F E Sbjct: 168 GGYMMACVANKVYAAPFAIVGSIGVIAQIPNFNRLLKNHDIDYEQHTAGDFKRTLTVFGE 227 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + Q ++ ++ F V R P ++ G W G +A +GLID V Sbjct: 228 NTDEGRAKFQQELEETHVLFKEFVGRYR--PNMDIAKVATGEHWYGQQAIDLGLIDAVST 285 Query: 230 QEEVWQSL 237 ++V L Sbjct: 286 SDDVILDL 293 >gi|219681648|ref|YP_002468034.1| possible protease SohB [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219624491|gb|ACL30646.1| possible protease SohB [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 336 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 3/169 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + +++ + +I V ++AAS GY+++C ++ IV+A + Sbjct: 126 VLLRLESSGGVIHGYGLAASQLNRLRQKGIRLIVSVDKIAASGGYMMACVADYIVSAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F + D +++++ Sbjct: 186 IIGSIGVVGQIPNFNKLLKKCNIDLELHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHK 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 F + E R P +S+G W G A + L+D +G +++ S Sbjct: 246 LFKSFIKEMR--PSLDIEDVSNGEHWFGTIALEKKLVDQIGTSDDILIS 292 >gi|307317075|ref|ZP_07596516.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306897163|gb|EFN27908.1| peptidase S49 [Sinorhizobium meliloti AK83] Length = 440 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 1/172 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 ER D + + + + SPGG + + ++ KPV E A SA Y I+ Sbjct: 107 FERGLADGNVRGIALIIDSPGGEVAGNFDLVDKMFAHRDEKPVRAYAMESAYSAAYSIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 ++ I + T VGSIGV+ + +D++G + + + K + +P+ ++P+ Sbjct: 167 VADSITVSRTGGVGSIGVVTAHVDASKMVDEMGWKVTFIFAGKHKVDGNPYEALSPEVKA 226 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q +D Y FV V+ +R + +K + ++ +T ++A GL D +G Sbjct: 227 RIQARIDELYSVFVSTVARNRGMD-EKAVRDTEALTFTASQATSNGLADHIG 277 >gi|114769102|ref|ZP_01446728.1| peptidase, family S49 [alpha proteobacterium HTCC2255] gi|114550019|gb|EAU52900.1| peptidase, family S49 [alpha proteobacterium HTCC2255] Length = 261 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCA 117 S+ A AL+++ SPGGS I I+++ N K PV V ++AAS GY ++ + Sbjct: 42 FSKKPDAVALVIN--SPGGSPVQSSLIGARIRRLANEKDIPVYAFVEDLAASGGYWLAAS 99 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I +S+VGSIGV+ + ++K G+ + + K+ PF + ++ Sbjct: 100 ADEIYIDPSSVVGSIGVISTGFGLDQLINKHGIERRVHTAGNSKSMLDPFQPQKDEDIKR 159 Query: 178 MQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ +++ + F +S R D+ L G IW G A GL+D +G Sbjct: 160 LKKLLEDVHQNFKDHISSCRGSKLADRDLFT--GEIWVGQRAIDDGLVDGIG 209 >gi|134288686|ref|YP_001111084.1| gp5, prophage LambdaMc01, peptidase, U7 family [Burkholderia phage phi644-2] gi|134132071|gb|ABO60868.1| gp5, prophage LambdaMc01, peptidase, U7 family [Burkholderia phage phi644-2] Length = 322 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 11/213 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 L ++ ++ + S S+H+ P + +R + + D + +++ + Sbjct: 78 LDIIPVSGILVSRSAHMNPCEPMTSYEGLRAAVNQAVA----------DPAVEHIVLDID 127 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS VGSIGV Sbjct: 128 SNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASQVIVSRTSGVGSIGV 187 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + V ++ G+ + SV + K + +P ++ +++ + +V +SY FV ++ Sbjct: 188 IANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLAFLTSMVQNSYKQFVDAIA 247 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 R + G I+ G + + GL D V Sbjct: 248 NFRGLSTQAVKDTQAG-IFFGQKGVEAGLADSV 279 >gi|320643596|gb|EFX12745.1| peptidase S49 [Escherichia coli O157:H- str. 493-89] gi|320648937|gb|EFX17541.1| peptidase S49 [Escherichia coli O157:H- str. H 2687] Length = 439 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I +++ + D +++ + +PGG I +V++ KPV ++M SA Sbjct: 110 IIALLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSACQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|166154708|ref|YP_001654826.1| exported protease IV [Chlamydia trachomatis 434/Bu] gi|166155583|ref|YP_001653838.1| exported protease IV [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335981|ref|ZP_07224225.1| exported protease IV [Chlamydia trachomatis L2tet1] gi|165930696|emb|CAP04193.1| exported protease IV [Chlamydia trachomatis 434/Bu] gi|165931571|emb|CAP07147.1| exported protease IV [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 331 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 8/218 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A IA G + Q ++ + ++V + PGG + + + + K + Sbjct: 73 AIIASSGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFEIDRMCATLSFWKKQWG 132 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKS 154 PV V + AS GY ++C ++ I +SL+GSIGV PY VK L + GV Sbjct: 133 IPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVR-SGPYFNVKEGLQRHGVETAI 191 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIW 213 + + KA +PFS + Q +VD+ Y FV V + R+ + +K + R++ Sbjct: 192 LTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSKLSKEKLTKVLGARVF 251 Query: 214 TGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 +A + GL+D + QE+ + L A G+ + R I Sbjct: 252 IAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|213967047|ref|ZP_03395197.1| peptidase, U7 family [Pseudomonas syringae pv. tomato T1] gi|301385232|ref|ZP_07233650.1| putative periplasmic protease [Pseudomonas syringae pv. tomato Max13] gi|302130173|ref|ZP_07256163.1| putative periplasmic protease [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928369|gb|EEB61914.1| peptidase, U7 family [Pseudomonas syringae pv. tomato T1] Length = 340 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|320664993|gb|EFX32107.1| peptidase S49 [Escherichia coli O157:H7 str. LSU-61] Length = 439 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I +++ + D +++ + +PGG I +V++ KPV ++M SA Sbjct: 110 IIALLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSACQ 169 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A++ + +T+ GSIGV+ + L+K GV I + S K + +P+S + Sbjct: 170 LLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPD 229 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +Q +D++ F + VS + + ++ ++ +++G EA GL D Sbjct: 230 DVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAVYSGQEAIDAGLAD 281 >gi|169795179|ref|YP_001712972.1| putative periplasmic protease [Acinetobacter baumannii AYE] gi|213158157|ref|YP_002320208.1| peptidase S49 [Acinetobacter baumannii AB0057] gi|215482727|ref|YP_002324925.1| Peptidase family S49 family protein [Acinetobacter baumannii AB307-0294] gi|301348388|ref|ZP_07229129.1| putative periplasmic protease [Acinetobacter baumannii AB056] gi|301512513|ref|ZP_07237750.1| putative periplasmic protease [Acinetobacter baumannii AB058] gi|301596256|ref|ZP_07241264.1| putative periplasmic protease [Acinetobacter baumannii AB059] gi|332857060|ref|ZP_08436366.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332869998|ref|ZP_08438974.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013113] gi|169148106|emb|CAM85969.1| putative protease (SohB) [Acinetobacter baumannii AYE] gi|213057317|gb|ACJ42219.1| peptidase S49 [Acinetobacter baumannii AB0057] gi|213988882|gb|ACJ59181.1| Peptidase family S49 family protein [Acinetobacter baumannii AB307-0294] gi|332726875|gb|EGJ58389.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332732498|gb|EGJ63749.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013113] Length = 320 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I++A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGQDALDLNLVDKLQTSDEYLLAL 261 >gi|325272247|ref|ZP_08138665.1| putative inner membrane peptidase [Pseudomonas sp. TJI-51] gi|324102619|gb|EGC00048.1| putative inner membrane peptidase [Pseudomonas sp. TJI-51] Length = 341 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 9/174 (5%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASN 119 +RD+ +++ L S GG ++ + +++ P+ + ++AAS GY+++C + Sbjct: 126 ARDE----VVLRLESGGGLVHSYGLAASQLARIRQAGIPLTVCIDKVAASGGYMMACIGD 181 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IV+A +++GSIGV+ Q P V L K + + + + K + F E K + Q Sbjct: 182 KIVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQ 241 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +D ++ F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 242 EDLDITHQLFKDFVARYRPQLHIDE---VATGEVWLGVAALNRQLVDTLQTSDE 292 >gi|169632872|ref|YP_001706608.1| putative periplasmic protease [Acinetobacter baumannii SDF] gi|184158970|ref|YP_001847309.1| putative periplasmic protease [Acinetobacter baumannii ACICU] gi|260556659|ref|ZP_05828877.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii ATCC 19606] gi|332874751|ref|ZP_08442621.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6014059] gi|169151664|emb|CAP00454.1| putative protease (SohB) [Acinetobacter baumannii] gi|183210564|gb|ACC57962.1| Periplasmic serine protease (ClpP class) [Acinetobacter baumannii ACICU] gi|193077950|gb|ABO12862.2| putative protease (SohB) [Acinetobacter baumannii ATCC 17978] gi|260409918|gb|EEX03218.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii ATCC 19606] gi|322508952|gb|ADX04406.1| SohB [Acinetobacter baumannii 1656-2] gi|323518938|gb|ADX93319.1| putative periplasmic protease [Acinetobacter baumannii TCDC-AB0715] gi|332737012|gb|EGJ67969.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6014059] Length = 320 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I++A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 211 THVLFKHFVEKYRPQLNVDK---VATGEHWYGQDALDLNLVDKLQTSDEYLLAL 261 >gi|114335029|gb|ABI72411.1| Peptidase S49, N-terminal domain protein [Shewanella frigidimarina NCIMB 400] Length = 340 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAAS 109 QE+ I +DD ++V++ S GG + + +++ P+ V ++AAS Sbjct: 115 QEVTAIITIADKDDQ---VLVNVESGGGMVHGYGLASSQLDRLRQANIPLSICVDKVAAS 171 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+++C +N + AA ++VGSIGV+ Q P L + + + K + F E Sbjct: 172 GGYMMACVANKVYAAPFAIVGSIGVIAQIPNFNRLLKNHDIDYEQHTAGDFKRTLTVFGE 231 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + Q ++ ++ F V R P ++ G W G +A +GLID V Sbjct: 232 NTDEGRAKFQQELEETHVLFKEFVGRYR--PNMDIAKVATGEHWYGQQAIDLGLIDAVST 289 Query: 230 QEEVWQSL 237 ++V L Sbjct: 290 SDDVILDL 297 >gi|50084405|ref|YP_045915.1| putative periplasmic protease [Acinetobacter sp. ADP1] gi|49530381|emb|CAG68093.1| putative protease (SohB) [Acinetobacter sp. ADP1] Length = 320 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 9/173 (5%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 +++ L SPGG + G A A Q V+ R + V ++AAS GY+++C +N IV+A Sbjct: 94 VVLRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTIVVDKVAASGGYMMACIANEIVSA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +++GSIGV+ Q P L + V + + K + F E P+ ++ + Sbjct: 151 PFAILGSIGVVAQVPNFNRLLKEHNVDFELYTAGEYKRTVTMFGENTPEGKAKFEEELKQ 210 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R P ++ G W G +A + L+D + +E SL Sbjct: 211 THALFKHFVEKYR--PQLNVEKVATGEHWYGQDALDLNLVDKLQTSDEYLLSL 261 >gi|326794648|ref|YP_004312468.1| peptidase S49 domain protein [Marinomonas mediterranea MMB-1] gi|326545412|gb|ADZ90632.1| Peptidase S49 domain protein [Marinomonas mediterranea MMB-1] Length = 337 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 88/168 (52%), Gaps = 6/168 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASN 119 ++DD ++V L S GG ++ +Q++K+ +T V ++AAS GY+++C ++ Sbjct: 119 TKDDE---VVVRLESGGGMVHSYGLAASQLQRIKDAGVSLTICVDKVAASGGYMMACVAD 175 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I+AA +++GSIGV+ Q P + LDK + ++ + K + E + + + Sbjct: 176 KIIAAPFAILGSIGVVAQIPNIHRLLDKNNIDVELHTAGKFKRTLTVIGENTDEGREKFK 235 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ ++ F V+ R + ++ ++ G W G++A + LID V Sbjct: 236 QDLEDTHVLFKDFVASQRAVLDIES--VATGETWYGSQAVENKLIDEV 281 >gi|257471337|ref|ZP_05635336.1| putative periplasmic protease [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] Length = 362 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 3/169 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + +++ + +I V ++AAS GY+++C ++ IV+A + Sbjct: 152 VLLRLESSGGVIHGYGLAASQLNRLRQKGIRLIVSVDKIAASGGYMMACVADYIVSAPFA 211 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + ++ + K + F + D +++++ Sbjct: 212 IIGSIGVVGQIPNFNKLLKKCNIDLELHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHK 271 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 F + E R P +S+G W G A + L+D +G +++ S Sbjct: 272 LFKSFIKEMR--PSLDIEDVSNGEHWFGTIALEKKLVDQIGTSDDILIS 318 >gi|225155745|ref|ZP_03724233.1| Periplasmic serine protease (ClpP class)-like protein [Opitutaceae bacterium TAV2] gi|224803539|gb|EEG21774.1| Periplasmic serine protease (ClpP class)-like protein [Opitutaceae bacterium TAV2] Length = 282 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 E + R D + ++++++SPGG+ + AI + KPV+ + ASA Y + Sbjct: 97 EALGRRD-VSGILLNINSPGGTTTGVPELASAIARAAENKPVVAFTDSLMASAAYWLGSQ 155 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDK------LGVSIKSVKS--SPMKAEPSPFSE 169 +++IVA++++ VGS+GV Y+ PFLD +G+ + VK+ +K P + Sbjct: 156 ADMIVASKSASVGSVGV-----YI-PFLDSSRRAEMMGLKVDVVKNKEGTLKGMGIPGTS 209 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + +Q D + F + R D+ L G+ A +++ GLID +G Sbjct: 210 LTEAQREHLQQRADEIFSMFKGDIKSRRPGVKDEAL---RGQTLLAAGSRETGLIDDIGD 266 Query: 230 QEEVWQSLYAL 240 + SL AL Sbjct: 267 IQHARASLAAL 277 >gi|258543792|ref|ZP_05704026.1| S49 (protease IV) family peptidase [Cardiobacterium hominis ATCC 15826] gi|258520967|gb|EEV89826.1| S49 (protease IV) family peptidase [Cardiobacterium hominis ATCC 15826] Length = 332 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 3/161 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG +A + +++ R+ P++ V ++AAS GY+++C +N ++AA + Sbjct: 126 VLLRLESGGGLVHAYGLAASQLARLRERQIPLVIAVDKVAASGGYMMACLANELIAAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GS+GV+ P L + + + + K + F E Q + + ++ Sbjct: 186 ILGSVGVIGALPNFNELLKQHRIRYEEHTAGEHKRSLTLFGENTDADRQQFRHELAVTHD 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F + R P ++ G W GA+A + LID +G Sbjct: 246 LFKNHIHRYR--PQLDIDAIATGETWYGAQAVENHLIDAIG 284 >gi|28869915|ref|NP_792534.1| peptidase, U7 family [Pseudomonas syringae pv. tomato str. DC3000] gi|28853160|gb|AAO56229.1| peptidase, U7 family [Pseudomonas syringae pv. tomato str. DC3000] gi|331014356|gb|EGH94412.1| putative inner membrane peptidase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 340 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|330960941|gb|EGH61201.1| putative inner membrane peptidase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 336 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHE 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAIDKLLVDELKTSDE 289 >gi|222148703|ref|YP_002549660.1| Periplasmic serine proteases (ClpP class) [Agrobacterium vitis S4] gi|221735689|gb|ACM36652.1| Periplasmic serine proteases (ClpP class) [Agrobacterium vitis S4] Length = 306 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 1/171 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++ S GG G A+Q + KP + + + A SAGYL++ + IV E Sbjct: 129 GVVFEYDSYGGEVNGGFETAAAMQALSREKPTLAILTDFAYSAGYLLASQARGIVMPEFG 188 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 GSIGV+ + L++ G+ + ++S KA+ +P+ ++ Q D Sbjct: 189 GAGSIGVIIMHADYSQALEQDGIKVTIIRSGKKKADGNPYEPLSADVADRWQAQADQMRD 248 Query: 188 WFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F V++ R K L S+ ++ +A +GL+D +G E + + Sbjct: 249 KFAETVAKGRKNRITKAKALASEADVYDAKQALSMGLVDAIGDPIEAFDAF 299 >gi|77459336|ref|YP_348843.1| putative periplasmic protease [Pseudomonas fluorescens Pf0-1] gi|77383339|gb|ABA74852.1| inner membrane peptidase. Serine peptidase. MEROPS family S49 [Pseudomonas fluorescens Pf0-1] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIREAGVPLTVCIDKVAASGGYMMACIGEKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQ 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A + L+D + +E Sbjct: 247 LFKNFVARYRPQLAIDE---VATGEVWLGIAALEKQLVDELKTSDE 289 >gi|330875134|gb|EGH09283.1| putative inner membrane peptidase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|289627176|ref|ZP_06460130.1| putative periplasmic protease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648724|ref|ZP_06480067.1| putative periplasmic protease [Pseudomonas syringae pv. aesculi str. 2250] gi|330867981|gb|EGH02690.1| putative inner membrane peptidase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|330982181|gb|EGH80284.1| putative inner membrane peptidase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|66045696|ref|YP_235537.1| putative periplasmic protease [Pseudomonas syringae pv. syringae B728a] gi|63256403|gb|AAY37499.1| Peptidase S49 [Pseudomonas syringae pv. syringae B728a] gi|330971283|gb|EGH71349.1| putative inner membrane peptidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|330503146|ref|YP_004380015.1| putative periplasmic protease [Pseudomonas mendocina NK-01] gi|328917432|gb|AEB58263.1| putative periplasmic protease [Pseudomonas mendocina NK-01] Length = 339 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + ++++ P+ V ++AAS GY+++C I++A + Sbjct: 126 VVLRLESGGGMVHSYGLASSQLVRIRDAGIPLTVCVDKVAASGGYMMACIGQKILSAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q+ +++++ Sbjct: 186 ILGSIGVVAQLPNVHRLLKKHEIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHE 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R P ++ G +W G A++ L+D Sbjct: 246 LFKGFVARYR--PQLDIDAIATGEVWLGMAAQERLLVD 281 >gi|311694855|gb|ADP97728.1| capsid protein of prophage [marine bacterium HP15] Length = 441 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+E D + +++ + +PGG R + +++ +KP+ + ++MA SAG Sbjct: 102 IIARVEEALADPTVNGILLDMDTPGGEVAGCFDTARRLNELRGQKPIASISYDMACSAGM 161 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 + A++ ++ GS+GV+ + + L G+ + + S K + +P+ + Sbjct: 162 ALHSATDYRYTTTSARTGSVGVVMMHASFEEQLKANGIDVTLIHSGAFKVDGNPYENLPE 221 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + Q D + F +V+ + L ++ I+TG +A + G D Sbjct: 222 QVLARFQAESDRLRNEFADMVATHIGLSASDVLA-TEAAIYTGQDAIEAGFAD 273 >gi|126730495|ref|ZP_01746306.1| peptidase, family S49 [Sagittula stellata E-37] gi|126709228|gb|EBA08283.1| peptidase, family S49 [Sagittula stellata E-37] Length = 265 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 8/192 (4%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 + RG + D + L+E+ R D A+ + ++SPGGS I I+++ + Sbjct: 25 VPARGNLSDRTAAALLEKAFRSKPD----AVALEINSPGGSPVQSSLIGARIRRLSEQHN 80 Query: 98 -PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 PV V ++AAS GY I+ A++ I A +S++GSIGV+ FL + G+ + Sbjct: 81 IPVYAFVEDVAASGGYWIASAADEIWADASSILGSIGVISSGFGAHVFLQRQGIERRVHT 140 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K+ PF + V + ++ + F+ + R L G IW G Sbjct: 141 AGKSKSMMDPFRPETEEDVARLNRLLGQLHDTFINQIRARRGEKLASNPDLFTGEIWVGQ 200 Query: 217 EAKKVGLIDVVG 228 A GL D +G Sbjct: 201 AAVDQGLADGIG 212 >gi|292656116|ref|YP_003536013.1| proteinase IV-like protein [Haloferax volcanii DS2] gi|291372078|gb|ADE04305.1| proteinase IV-like protein [Haloferax volcanii DS2] Length = 299 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 28/198 (14%) Query: 38 VARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 VA I++ G I + +L E + ++S A+++ + SPGGSA A E ++ A+ + Sbjct: 44 VAVISVDGTITSYTADQLEEDLHEARENESIKAVVLQVDSPGGSAAASEQMYLAVNRTAQ 103 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV++ V AS Y S I +S++GS+GV P +G S + Sbjct: 104 EMPVVSSVEGTGASGAYYTMLPSESIYVTPSSVIGSVGVRGSAP--------IGGSSNEI 155 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-----G 210 ++ P KA + ++ + Q +++ H FV V E R L LS Sbjct: 156 RTGPDKASMT----LDHREAQ-----IETLKHAFVGSVMEHRG----DELSLSREEVAYA 202 Query: 211 RIWTGAEAKKVGLIDVVG 228 +++TGA A + G D +G Sbjct: 203 KVYTGARATQNGYADDIG 220 >gi|28952049|ref|NP_240107.2| putative periplasmic protease [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682205|ref|YP_002468589.1| possible protease SohB [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11387171|sp|P57370|SOHB_BUCAI RecName: Full=Probable protease sohB gi|219621938|gb|ACL30094.1| possible protease SohB [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086594|gb|ADP66675.1| putative periplasmic protease [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 336 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 3/169 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + +++ + +I V ++AAS GY+++C ++ IV+A + Sbjct: 126 VLLRLESSGGVIHGYGLAASQLNRLRQKGIRLIVSVDKIAASGGYMMACVADYIVSAPFA 185 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + K + F + D +++++ Sbjct: 186 IIGSIGVVGQIPNFNKLLKKCNIDFELHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHK 245 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 F + E R P +S+G W G A + L+D +G +++ S Sbjct: 246 LFKSFIKEMR--PSLDIEDVSNGEHWFGTIALEKKLVDQIGTSDDILIS 292 >gi|148547143|ref|YP_001267245.1| putative periplasmic protease [Pseudomonas putida F1] gi|148511201|gb|ABQ78061.1| Peptidase S49, N-terminal domain protein [Pseudomonas putida F1] Length = 339 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L K + + + + Sbjct: 158 PLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTA 217 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q+ +D ++ F VS R P ++ G +W G Sbjct: 218 GEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVSRYR--PQLHIDEVATGEVWLGVA 275 Query: 218 AKKVGLID 225 A L+D Sbjct: 276 ALNRKLVD 283 >gi|330890771|gb|EGH23432.1| putative inner membrane peptidase [Pseudomonas syringae pv. mori str. 301020] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|145350683|ref|XP_001419729.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579961|gb|ABO98022.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 234 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 2/141 (1%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ IVA+ +++GSIGV+ + P V L + G+ ++V + K Sbjct: 88 VEQVAASGGYMMACVADEIVASPFAVLGSIGVISEQPNVYERLQREGIEFQTVTAGKFKR 147 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 +P +V + ++ + ++ F V+E+R P ++ G W G +A Sbjct: 148 TLTPTKKVTEEDLEKSKKDIEDVLVLFKGFVAENR--PTLDIDNVATGETWFGKDALSRN 205 Query: 223 LIDVVGGQEEVWQSLYALGVD 243 L+D + ++V L + G + Sbjct: 206 LVDKLKTSDDVLLDLLSAGAE 226 >gi|302187752|ref|ZP_07264425.1| putative periplasmic protease [Pseudomonas syringae pv. syringae 642] gi|330953371|gb|EGH53631.1| putative inner membrane peptidase [Pseudomonas syringae Cit 7] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|330967647|gb|EGH67907.1| putative inner membrane peptidase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 340 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 127 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P V L K + + + + K + F E K + Q +D ++ Sbjct: 187 ILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHD 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F V+ R + D+ ++ G +W G A L+D + +E Sbjct: 247 LFKNFVASYRPQLSIDE---VATGEVWLGMAAVDKLLVDELKTSDE 289 >gi|313498180|gb|ADR59546.1| Putative periplasmic protease [Pseudomonas putida BIRD-1] Length = 339 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L K + + + + Sbjct: 158 PLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTA 217 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q+ +D ++ F VS R P ++ G +W G Sbjct: 218 GEYKRTLTIFGENTEKGREKFQEDLDITHQLFKDFVSRYR--PQLHIDEVATGEVWLGVA 275 Query: 218 AKKVGLID 225 A L+D Sbjct: 276 ALNRKLVD 283 >gi|89056413|ref|YP_511864.1| peptidase S49 [Jannaschia sp. CCS1] gi|88865962|gb|ABD56839.1| peptidase S49 [Jannaschia sp. CCS1] Length = 278 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 5/187 (2%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PV 99 RG I D+ IE+ A+ + ++SPGGS + I+++ K PV Sbjct: 38 GTRGGINDAT-FAPVIEKAFAKGKPKAVALVMNSPGGSPVQSALVAARIRRLAEEKDIPV 96 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSS 158 V ++AAS GY ++CA++ I +S+VGSIGV+ + +V+ L KLGV + + Sbjct: 97 HAFVEDVAASGGYWLACAADDIWVDPSSIVGSIGVVSAGFGFVEA-LGKLGVERRVHTAG 155 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ PFS + V+ ++ + + F+ V R + G WTG Sbjct: 156 ENKSILDPFSPEKDEDVERLKSLQTDIHASFIDHVKTRRGDRLKDHPEMFTGAFWTGTRG 215 Query: 219 KKVGLID 225 ++GL D Sbjct: 216 VELGLAD 222 >gi|284988655|ref|YP_003407209.1| peptidase S49 [Geodermatophilus obscurus DSM 43160] gi|284061900|gb|ADB72838.1| peptidase S49 [Geodermatophilus obscurus DSM 43160] Length = 417 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 22/202 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAAS 109 ++ + I+ + +D A LI+ L++PGG+ + AI A+++ + R V+ V M+AS Sbjct: 148 DVADTIDALETED-ADGLILELNTPGGTIHGSRAIADAVERYQKRTGNQVLAHVQGMSAS 206 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD---------------KLGVSIKS 154 G ++ IVA SLVGSIGV+ P+ + F D GV+ + Sbjct: 207 GGMYAMAGADQIVADHGSLVGSIGVIMG-PFQR-FRDVTGIPGSLLEPGVTTDGGVTEEY 264 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IW 213 + K +P+ ++ + ++ +D Y FV VS++R IP +T+V G ++ Sbjct: 265 LTRGRGKDFGNPYRDMTEEERAVLGRGLDREYEAFVSWVSQARGIP-PQTIVDELGAFVF 323 Query: 214 TGAEAKKVGLIDVVGGQEEVWQ 235 A GL+D V G+EE ++ Sbjct: 324 DSYTAVDRGLVDRVLGREEAYR 345 >gi|298713144|emb|CBJ26900.1| putative periplasmic protease [Ectocarpus siliculosus] Length = 898 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 3/168 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 ++V L SPGG + ++K+R +T V ++AAS GY+I+C ++ + A + Sbjct: 573 VVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMIACIADELTTAPFA 632 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ L K GV S K+ PF EV + M Q +D+ + Sbjct: 633 MLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHS 692 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 F V R P + G IW G A + L D V E Q Sbjct: 693 AFKTHVHRYR--PSVDIEAVGTGEIWLGQRAVDMRLADKVTTAMEYLQ 738 >gi|330946509|gb|EGH47542.1| putative inner membrane peptidase [Pseudomonas syringae pv. pisi str. 1704B] Length = 189 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K + + + + Sbjct: 6 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTA 65 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q +D ++ F V+ R P ++ G +W G Sbjct: 66 GEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVATGEVWLGMA 123 Query: 218 AKKVGLIDVVGGQEE 232 A L+D + +E Sbjct: 124 AVDKLLVDELKTSDE 138 >gi|330902693|gb|EGH33708.1| putative inner membrane peptidase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 193 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K + + + + Sbjct: 10 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTA 69 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q +D ++ F V+ R P ++ G +W G Sbjct: 70 GEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVATGEVWLGMA 127 Query: 218 AKKVGLIDVVGGQEE 232 A L+D + +E Sbjct: 128 AVDKLLVDELKTSDE 142 >gi|91793823|ref|YP_563474.1| putative periplasmic protease [Shewanella denitrificans OS217] gi|91715825|gb|ABE55751.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella denitrificans OS217] Length = 337 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K + + + K Sbjct: 162 IDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFHRLLQKHDIDYEQHTAGDFKR 221 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + F + + Q ++ ++ F V + R P ++ G W G +A ++G Sbjct: 222 TLTLFGQNTQEGRDKFQQELEETHVLFKSFVGQYR--PEMDIAKVATGEHWYGQQAIELG 279 Query: 223 LIDVVGGQEEVWQSL 237 LID + ++V +L Sbjct: 280 LIDAISTSDDVLLNL 294 >gi|71065760|ref|YP_264487.1| putative periplasmic protease [Psychrobacter arcticus 273-4] gi|71038745|gb|AAZ19053.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Psychrobacter arcticus 273-4] Length = 324 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCAS 118 IS + ++V L S GG + + ++K+ +T V ++AAS GY+++C + Sbjct: 93 ISTANKGDEVVVRLESGGGVVHGYGLAAAQLARLKDAGLKLTVCVDKVAASGGYMMACVA 152 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + IVAA +++GSIGV+ Q P +L V + + K + F E + K Sbjct: 153 DNIVAAPFAIIGSIGVVSQLPNFHKWLKNHDVDYEMFTAGDYKRTVTVFGENDDKDRAKY 212 Query: 179 QDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q+ ++ ++ F V+ R + DK ++ G W G +A + L+D Sbjct: 213 QEELEQTHELFKHFVNRYRGMLDVDK---VATGEHWYGEDALHLNLVD 257 >gi|21672552|ref|NP_660619.1| putative periplasmic protease [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009272|sp|Q8K9P8|SOHB_BUCAP RecName: Full=Probable protease sohB gi|21623177|gb|AAM67830.1| possible protease SohB [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 342 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 6/177 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 ++DD +++ L S GG + G A + + +N+ +I + ++AAS GY+++C ++ Sbjct: 126 NKDDE---VLLRLESSGGVIHGYGLAAAQLERLRQNKIRLIISIDKIAASGGYMMACVAD 182 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I++A +++GSIGV+ Q P L K + ++ + K + F + + Sbjct: 183 YIISAPFAIIGSIGVVGQLPNFNKLLKKCNIDVELHTAGDYKRTLTMFGQNTELTRKKFC 242 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ ++ F + + + R P +S+G W G A K L+D + + + S Sbjct: 243 QELNLTHEIFKKFIKKMR--PCLDIENISNGEHWFGTIAFKKNLVDEINTSDNILMS 297 >gi|167621040|ref|ZP_02389671.1| phage minor capsid protein C, putative [Burkholderia thailandensis Bt4] Length = 322 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 1/159 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS Sbjct: 122 IVLDIDSNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASKVIVSRTSG 181 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ + V ++ G+ + SV + K + +P ++ +++ + +V +SY Sbjct: 182 VGSIGVIANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLTFLTSMVQNSYKQ 241 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 FV ++ R + G I+ G + + GL D V Sbjct: 242 FVDAIANFRGLSTQAVKDTQAG-IFFGQKGVEAGLADSV 279 >gi|224014857|ref|XP_002297090.1| protease [Thalassiosira pseudonana CCMP1335] gi|220968209|gb|EED86558.1| protease [Thalassiosira pseudonana CCMP1335] Length = 217 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 7/200 (3%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA-IQKVKNRKPVIT-EV 103 Q+ D +E + I R S+ +I+ GG G + A +Q+ K + +T V Sbjct: 17 QVNDLREEVTGILRASQPGDEVLMILQ---SGGGTVTGYGLSAAQLQRFKTKGLKLTICV 73 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY++ C ++ IVA+ +++GSIGV+ P L + G+ +++ + K Sbjct: 74 EQVAASGGYMMCCTADRIVASPFAVLGSIGVISDIPNAYERLKQEGIEFQTITAGKYKRT 133 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 +P +V + ++ ++ ++ F V R P ++ G W G +A GL Sbjct: 134 VTPTKKVTKEDLKKSEEDINDILKLFKAFVKSQR--PQLDIENVATGETWFGEDALAKGL 191 Query: 224 IDVVGGQEEVWQSLYALGVD 243 D + ++V G D Sbjct: 192 CDEIATADDVLLEFVDNGYD 211 >gi|297748624|gb|ADI51170.1| protease IV [Chlamydia trachomatis D-EC] gi|297749504|gb|ADI52182.1| protease IV [Chlamydia trachomatis D-LC] Length = 346 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 8/218 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A +A G + Q ++ + ++V + PGG + + + + K + Sbjct: 88 AIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFEIDRMCATLSFWKKQWG 147 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKS 154 PV V + AS GY ++C ++ I +SL+GSIGV PY VK L + GV Sbjct: 148 IPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVR-SGPYFSVKEGLQRHGVETAI 206 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIW 213 + + KA +PFS + Q +VD+ Y FV V + R+ + +K + R++ Sbjct: 207 LTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSKLSKEKLTKVLGARVF 266 Query: 214 TGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 +A + GL+D + QE+ + L A G+ + R I Sbjct: 267 IAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 304 >gi|126642480|ref|YP_001085464.1| putative periplasmic protease [Acinetobacter baumannii ATCC 17978] Length = 226 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 11/173 (6%) Query: 70 IVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAE 125 +V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I++A Sbjct: 1 MVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISAP 57 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++VGSIGV+ Q P L + V + + K + F E P+ ++ + + Sbjct: 58 FAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQT 117 Query: 186 YHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + F V + R + DK ++ G W G +A + L+D + +E +L Sbjct: 118 HVLFKHFVEKYRPQLNVDK---VATGEHWYGQDALDLNLVDKLQTSDEYLLAL 167 >gi|25403581|pir||A84963 probable proteinase sohB [imported] - Buchnera sp. (strain APS) gi|10038958|dbj|BAB12993.1| possible protease sohB [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|311086020|gb|ADP66102.1| putative periplasmic protease [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087177|gb|ADP67257.1| putative periplasmic protease [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087706|gb|ADP67785.1| putative periplasmic protease [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 362 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 3/169 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + + +++ + +I V ++AAS GY+++C ++ IV+A + Sbjct: 152 VLLRLESSGGVIHGYGLAASQLNRLRQKGIRLIVSVDKIAASGGYMMACVADYIVSAPFA 211 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P L K + + + K + F + D +++++ Sbjct: 212 IIGSIGVVGQIPNFNKLLKKCNIDFELHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHK 271 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 F + E R P +S+G W G A + L+D +G +++ S Sbjct: 272 LFKSFIKEMR--PSLDIEDVSNGEHWFGTIALEKKLVDQIGTSDDILIS 318 >gi|17975166|ref|NP_536361.1| putative capsid assembly protein/protease [Burkholderia phage phiE125] gi|17484027|gb|AAL40278.1|AF447491_5 gp5 [Burkholderia phage phiE125] Length = 301 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 1/159 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS Sbjct: 101 IVLDIDSNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASKVIVSRTSG 160 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ + V ++ G+ + SV + K + +P ++ +++ + +V +SY Sbjct: 161 VGSIGVIANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLTFLTSMVQNSYKQ 220 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 FV ++ R + G I+ G + + GL D V Sbjct: 221 FVDAIANFRGLSTQAVKDTQAG-IFFGQKGVEAGLADSV 258 >gi|26990627|ref|NP_746052.1| putative periplasmic protease [Pseudomonas putida KT2440] gi|24985612|gb|AAN69516.1|AE016585_8 sohB protein, peptidase U7 family [Pseudomonas putida KT2440] Length = 339 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L K + + + + Sbjct: 158 PLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTA 217 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q+ +D ++ F VS R P ++ G +W G Sbjct: 218 GEYKRTLTVFGENTEKGREKYQEDLDITHQLFKDFVSRYR--PQLHIDEVATGEVWLGVA 275 Query: 218 AKKVGLID 225 A L+D Sbjct: 276 ALNRKLVD 283 >gi|220922431|ref|YP_002497733.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219947038|gb|ACL57430.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 461 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 84/172 (48%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++++ L SPGG A +++V +KPV V+ MAASA Y I+ A+N IV T Sbjct: 144 SILLDLESPGGEAVGAFEAAEVVRQVAAQKPVTALVNGMAASAAYAIASAANRIVTIPTG 203 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIGV+ + +L G+ + + K + +P+ + +Q V+ Y Sbjct: 204 ISGSIGVVLCHLDFSEWLKAEGLKPTLIFAGDHKVDANPYEPLPDDVRANLQAEVEGFYG 263 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 FV V++ R + + + R + G EA GL+D VG EEV L A Sbjct: 264 KFVETVAKGRTNLDETKIRGTQARCFMGEEAVAAGLVDAVGTLEEVLADLSA 315 >gi|255348869|ref|ZP_05380876.1| exported protease IV [Chlamydia trachomatis 70] gi|255503409|ref|ZP_05381799.1| exported protease IV [Chlamydia trachomatis 70s] gi|255507087|ref|ZP_05382726.1| exported protease IV [Chlamydia trachomatis D(s)2923] gi|289525538|emb|CBJ15016.1| exported protease IV [Chlamydia trachomatis Sweden2] gi|296435097|gb|ADH17275.1| exported protease IV [Chlamydia trachomatis E/150] gi|296438818|gb|ADH20971.1| exported protease IV [Chlamydia trachomatis E/11023] Length = 331 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 8/218 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A +A G + Q ++ + ++V + PGG + + + + K + Sbjct: 73 AIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFEIDRMCATLSFWKKQWG 132 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKS 154 PV V + AS GY ++C ++ I +SL+GSIGV PY VK L + GV Sbjct: 133 IPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVR-SGPYFNVKEGLQRHGVETAI 191 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIW 213 + + KA +PFS + Q +VD+ Y FV V + R+ + +K + R++ Sbjct: 192 LTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSKLSKEKLTKVLGARVF 251 Query: 214 TGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 +A + GL+D + QE+ + L A G+ + R I Sbjct: 252 IAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|170722382|ref|YP_001750070.1| putative periplasmic protease [Pseudomonas putida W619] gi|169760385|gb|ACA73701.1| Peptidase S49 domain protein [Pseudomonas putida W619] Length = 339 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L K + + + + Sbjct: 158 PLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLLKKHNIDFEVLTA 217 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q+ +D ++ F V+ R P ++ G +W G Sbjct: 218 GEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVARYR--PQLHIDEVATGEVWLGVA 275 Query: 218 AKKVGLID 225 A L+D Sbjct: 276 ALNRKLVD 283 >gi|257455400|ref|ZP_05620635.1| peptidase, S49 [Enhydrobacter aerosaccus SK60] gi|257447362|gb|EEV22370.1| peptidase, S49 [Enhydrobacter aerosaccus SK60] Length = 330 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 3/160 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +IV L S GG +A + ++K +T + ++AAS GY+++C ++ I+AA + Sbjct: 108 VIVRLESSGGMVHAYGLAAAQLARIKEAGLHLTVCIDKVAASGGYMMACVADKILAAPFA 167 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L+K + ++ + K + F E + Q Q ++ ++ Sbjct: 168 VVGSIGVVAQVPNFHDLLEKHDIDVEVFTAGKYKRTVTVFGENTEEDKQKFQQELEETHK 227 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V + R P ++ G W G +A L+D + Sbjct: 228 LFKDFVRKYR--PSLDVEQVATGEHWYGEDAITRNLVDAL 265 >gi|296436953|gb|ADH19123.1| exported protease IV [Chlamydia trachomatis G/11222] Length = 331 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 8/218 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A +A G + Q ++ + ++V + PGG + + + + K + Sbjct: 73 AIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFEIDRMCATLSFWKKQWG 132 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKS 154 PV V + AS GY ++C ++ I +SL+GSIGV PY VK L + GV Sbjct: 133 IPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVR-SGPYFSVKEGLQRHGVETAI 191 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIW 213 + + KA +PFS + Q +VD+ Y FV V + R+ + +K + R++ Sbjct: 192 LTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSKLSKEKLTKVLGARVF 251 Query: 214 TGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 +A + GL+D + QE+ + L A G+ + R I Sbjct: 252 IAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|294635994|ref|ZP_06714433.1| peptidase, S49 family [Edwardsiella tarda ATCC 23685] gi|291090671|gb|EFE23232.1| peptidase, S49 family [Edwardsiella tarda ATCC 23685] Length = 190 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P +L K V ++ + K Sbjct: 13 VDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPNFNRWLKKNDVDVELHTAGEFKR 72 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + F E + +D ++ F + V R P ++ G W G +A + G Sbjct: 73 TLTLFGENTEAGREKFCQELDETHRLFKQFVQRQR--PSLDVDAVATGEHWYGEQALEKG 130 Query: 223 LID 225 L+D Sbjct: 131 LVD 133 >gi|167034552|ref|YP_001669783.1| putative periplasmic protease [Pseudomonas putida GB-1] gi|166861040|gb|ABY99447.1| Peptidase S49 domain protein [Pseudomonas putida GB-1] Length = 339 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L K + + + + Sbjct: 158 PLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTA 217 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q+ +D ++ F V+ R P ++ G +W G Sbjct: 218 GEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVARYR--PQLHIDEVATGEVWLGVA 275 Query: 218 AKKVGLID 225 A L+D Sbjct: 276 ALNRKLVD 283 >gi|167574265|ref|ZP_02367139.1| phage minor capsid protein C, putative [Burkholderia oklahomensis C6786] Length = 322 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 5/161 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS Sbjct: 122 IVLDIDSNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASNVIVSRTSG 181 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 +GSIGV+ + V ++ G+ + SV + K + +P ++ +++ + +V +SY Sbjct: 182 IGSIGVIANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLTFLTSMVQNSYKQ 241 Query: 189 FVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLIDVV 227 FV ++ R + T + D + I+ G + GL D V Sbjct: 242 FVDAIANFRGL---STQAVKDTQAGIFFGQKGVDAGLADSV 279 >gi|55378760|ref|YP_136610.1| protease IV-like [Haloarcula marismortui ATCC 43049] gi|55231485|gb|AAV46904.1| protease IV-like [Haloarcula marismortui ATCC 43049] Length = 319 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 23/204 (11%) Query: 33 DNSPHVARIAIRGQIEDSQ-ELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAI 90 D+ P VA I +RG D+ +++ R +R ++S A+++ + SPGG + E + A+ Sbjct: 42 DDDPSVAVITLRGGTTDANVNAVKQDLREARTNESIEAVVLRVDSPGGPVDSSEEFYLAV 101 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLG 149 + + PV+ V AAS GY ++ IV +S VGSIGV+ Q P + +++ G Sbjct: 102 NRTASEMPVVAYVEGTAASGGYYGITPADEIVVKPSSNVGSIGVIVQAPLSLIEQVEQQG 161 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS- 208 + V+S P KA+ S S +++ ++ FV V R + L +S Sbjct: 162 ETF--VRSGPDKAQISKDS---------LREDIEVLQRSFVGTVMRHRG----EQLTVSR 206 Query: 209 ----DGRIWTGAEAKKVGLIDVVG 228 +G + GA+A + G D +G Sbjct: 207 EEVANGGTYLGAQATENGFADRIG 230 >gi|15605222|ref|NP_220008.1| protease [Chlamydia trachomatis D/UW-3/CX] gi|76789231|ref|YP_328317.1| protease IV [Chlamydia trachomatis A/HAR-13] gi|237802922|ref|YP_002888116.1| exported protease IV [Chlamydia trachomatis B/Jali20/OT] gi|237804844|ref|YP_002888998.1| exported protease IV [Chlamydia trachomatis B/TZ1A828/OT] gi|255311310|ref|ZP_05353880.1| exported protease IV [Chlamydia trachomatis 6276] gi|255317611|ref|ZP_05358857.1| exported protease IV [Chlamydia trachomatis 6276s] gi|6578107|gb|AAC68094.2| Protease [Chlamydia trachomatis D/UW-3/CX] gi|76167761|gb|AAX50769.1| protease IV [Chlamydia trachomatis A/HAR-13] gi|231273144|emb|CAX10057.1| exported protease IV [Chlamydia trachomatis B/TZ1A828/OT] gi|231274156|emb|CAX10950.1| exported protease IV [Chlamydia trachomatis B/Jali20/OT] gi|296436025|gb|ADH18199.1| exported protease IV [Chlamydia trachomatis G/9768] gi|296437886|gb|ADH20047.1| exported protease IV [Chlamydia trachomatis G/11074] gi|297140386|gb|ADH97144.1| exported protease IV [Chlamydia trachomatis G/9301] Length = 331 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 8/218 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A +A G + Q ++ + ++V + PGG + + + + K + Sbjct: 73 AIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFEIDRMCATLSFWKKQWG 132 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY--VKPFLDKLGVSIKS 154 PV V + AS GY ++C ++ I +SL+GSIGV PY VK L + GV Sbjct: 133 IPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVR-SGPYFSVKEGLQRHGVETAI 191 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIW 213 + + KA +PFS + Q +VD+ Y FV V + R+ + +K + R++ Sbjct: 192 LTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSKLSKEKLTKVLGARVF 251 Query: 214 TGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 +A + GL+D + QE+ + L A G+ + R I Sbjct: 252 IAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|254240224|ref|ZP_04933546.1| hypothetical protein PA2G_00866 [Pseudomonas aeruginosa 2192] gi|126193602|gb|EAZ57665.1| hypothetical protein PA2G_00866 [Pseudomonas aeruginosa 2192] Length = 341 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 6/166 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASN 119 +DD +++ L S GG + + +++ P+ V ++AAS GY+++C + Sbjct: 122 GKDDE---VVLRLESGGGMVHGYGLAASQLARIRQAGVPLTVCVDKVAASGGYMMACIGD 178 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I++A +++GSIGV+ Q P V L K + + + + K + F E K + Q Sbjct: 179 RILSAPFAILGSIGVVAQLPNVHRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQ 238 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ ++ F V+ R P ++ G +W G A L+D Sbjct: 239 EDLEVTHELFKNFVAHYR--PQLNMDEIATGEVWLGQAALGKLLVD 282 >gi|15597029|ref|NP_250523.1| periplasmic protease [Pseudomonas aeruginosa PAO1] gi|107101264|ref|ZP_01365182.1| hypothetical protein PaerPA_01002297 [Pseudomonas aeruginosa PACS2] gi|116049782|ref|YP_791411.1| putative periplasmic protease [Pseudomonas aeruginosa UCBPP-PA14] gi|218892214|ref|YP_002441081.1| putative periplasmic protease [Pseudomonas aeruginosa LESB58] gi|254234926|ref|ZP_04928249.1| hypothetical protein PACG_00801 [Pseudomonas aeruginosa C3719] gi|296389777|ref|ZP_06879252.1| putative periplasmic protease [Pseudomonas aeruginosa PAb1] gi|313110530|ref|ZP_07796415.1| putative protease [Pseudomonas aeruginosa 39016] gi|9947818|gb|AAG05221.1|AE004609_8 probable protease [Pseudomonas aeruginosa PAO1] gi|115585003|gb|ABJ11018.1| putative protease [Pseudomonas aeruginosa UCBPP-PA14] gi|126166857|gb|EAZ52368.1| hypothetical protein PACG_00801 [Pseudomonas aeruginosa C3719] gi|218772440|emb|CAW28222.1| probable protease [Pseudomonas aeruginosa LESB58] gi|310882917|gb|EFQ41511.1| putative protease [Pseudomonas aeruginosa 39016] Length = 341 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 6/166 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASN 119 +DD +++ L S GG + + +++ P+ V ++AAS GY+++C + Sbjct: 122 GKDDE---VVLRLESGGGMVHGYGLAASQLARIRQAGVPLTVCVDKVAASGGYMMACIGD 178 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I++A +++GSIGV+ Q P V L K + + + + K + F E K + Q Sbjct: 179 RILSAPFAILGSIGVVAQLPNVHRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQ 238 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ ++ F V+ R P ++ G +W G A L+D Sbjct: 239 EDLEVTHELFKNFVAHYR--PQLNMDEIATGEVWLGQAALGKLLVD 282 >gi|261856483|ref|YP_003263766.1| peptidase S49 domain protein [Halothiobacillus neapolitanus c2] gi|261836952|gb|ACX96719.1| Peptidase S49 domain protein [Halothiobacillus neapolitanus c2] Length = 347 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 2/155 (1%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++ ++ IVAA ++VGSIGV+ Q P + L V I+ + + K Sbjct: 164 VDKVAASGGYMMAAVAHRIVAAPFAIVGSIGVVAQIPNIHRLLKNHDVDIELLTAGQYKR 223 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + E P+ + Q ++ ++ F + E R P ++ G W G +A +G Sbjct: 224 TLTLLGENTPEGREKFQSQLNETHELFKSFLLEYR--PSLDLSKVATGEYWFGTQAMTLG 281 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L+D + +E + +A +RK+ N K Sbjct: 282 LVDELTTSDEWIERQFAERAVIEVRKMPATNMLKK 316 >gi|302035495|ref|YP_003795817.1| putative phage minor capsid protein C [Candidatus Nitrospira defluvii] gi|300603559|emb|CBK39889.1| putative Phage minor capsid protein C [Candidatus Nitrospira defluvii] Length = 404 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 1/187 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 Q++ +I+ D + A+++ + SPGG + + ++ KPV ++MA SA Sbjct: 84 QDIAAQIDTAIADPAVAAIVLDIDSPGGESGGVFDLADRVRAAAQVKPVWALANDMAYSA 143 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I A++ T VGSIGV+ + + GV +V + K + +P + Sbjct: 144 AYAIGSAASRFFVTRTGGVGSIGVIAMHADQSVRDAQDGVRYTTVFAGARKNDLNPHEPI 203 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +A ++ VD Y FV V+ R++ + G ++ G +A GL D VG Sbjct: 204 SDEAHAFLKSEVDRIYGLFVDTVASHRSLSSEAVRATEAG-VFFGNDAVAAGLADAVGNF 262 Query: 231 EEVWQSL 237 ++V L Sbjct: 263 DDVLNEL 269 >gi|49087080|gb|AAT51414.1| PA1832 [synthetic construct] Length = 342 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 6/166 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASN 119 +DD +++ L S GG + + +++ P+ V ++AAS GY+++C + Sbjct: 122 GKDDE---VVLRLESGGGMVHGYGLAASQLARIRQAGVPLTVCVDKVAASGGYMMACIGD 178 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I++A +++GSIGV+ Q P V L K + + + + K + F E K + Q Sbjct: 179 RILSAPFAILGSIGVVAQLPNVHRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQ 238 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ ++ F V+ R P ++ G +W G A L+D Sbjct: 239 EDLEVTHELFKNFVAHYR--PQLNMDEIATGEVWLGQAALGKLLVD 282 >gi|168704191|ref|ZP_02736468.1| hypothetical protein GobsU_31944 [Gemmata obscuriglobus UQM 2246] Length = 304 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 17/215 (7%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGY 112 E++E ++ D A A+++ ++SPGG A A+ ++ K + R PV+ + + A Y Sbjct: 90 EKLEAVACDPCAKAVVLRINSPGGGVAACIAMRHDLEQFKARTRLPVVACLMDTATGGAY 149 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS---IKSVKSSPMKAEPSPFSE 169 ++ A++ IVA ++ G +GV+ ++ + + V IKS + + + ++ Sbjct: 150 YLASAADHIVAGPATVTGGLGVVLNLFNLQDLMGMVNVRPQLIKSGERTDIGTSARRLTD 209 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL----VSESRNIPYDKTLV--------LSDGRIWTGAE 217 + +Q M D +R V E P++ ++ DGRI T + Sbjct: 210 GERELLQAMADEFRDRLAADIRRSRPGVVERLETPFEGSMFGWNLDRGRTFDGRILTAEQ 269 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 AK L+D VG ++ GV + R W Sbjct: 270 AKARNLVDAVGSLDDAISVAAPDGVPRRPRAGPAW 304 >gi|32471387|ref|NP_864380.1| proteinase IV homolog yteI [Rhodopirellula baltica SH 1] gi|32443228|emb|CAD72059.1| proteinase IV homolog yteI [Rhodopirellula baltica SH 1] Length = 468 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 44/281 (15%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E++ I D + A+++ ++SPGG A + + +Q +K+ + PV+ + Y Sbjct: 180 EKMRHIESDPTILAVVLRINSPGGGVTASDMLAHQLQHLKSNRNIPVVACLMTTGTGGAY 239 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ ++ IVA TS+VG IGV+ ++ L + + +KS SP + Sbjct: 240 YLATHADAIVAHPTSVVGGIGVILNNYNMEDTLGQFNIVSLPIKSGDKIDVGSPERMMQR 299 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESR-------------NI-------------------- 199 + ++Q + D + F+ V SR N+ Sbjct: 300 EERDLLQSMADEFHQRFIEQVRSSRGERLVVTSEVDESNLDESDADKLDAGDLDRDDMDD 359 Query: 200 ----PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE---VWQSLYALGVDQSIRKIKDW 252 P D L+ DGR+ +G A+ +GL+D G ++ + + L ++ ++ Sbjct: 360 AELKPSD--LIPFDGRVVSGLHAQTIGLVDQTGYLDDAVSLAGRMAGLSSSPALVLLRRD 417 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 N F N+ ++S+L +P + ++ + +W P Sbjct: 418 NDRAMSEFDVTPNVPMTSILPIQLPGLDRSSMPTFLYLWQP 458 >gi|93006012|ref|YP_580449.1| putative periplasmic protease [Psychrobacter cryohalolentis K5] gi|92393690|gb|ABE74965.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Psychrobacter cryohalolentis K5] Length = 326 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCAS 118 IS + ++V L S GG + + ++K+ +T V ++AAS GY+++C + Sbjct: 95 ISTANKGDEVVVRLESGGGVVHGYGLAAAQLARLKDAGLKLTVCVDKVAASGGYMMACVA 154 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + IVAA +++GSIGV+ Q P +L V + + K + F E + + Sbjct: 155 DNIVAAPFAIIGSIGVVSQLPNFHKWLKNHDVDYEMFTAGDYKRTVTVFGENDDEDRAKY 214 Query: 179 QDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 Q+ ++ ++ F V+ R + DK ++ G W G +A + L+D Sbjct: 215 QEELEQTHELFKHFVNRYRGMLDVDK---VATGEHWYGEDALHLNLVD 259 >gi|296395336|ref|YP_003660220.1| peptidase S49 [Segniliparus rotundus DSM 44985] gi|296182483|gb|ADG99389.1| peptidase S49 [Segniliparus rotundus DSM 44985] Length = 291 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 7/168 (4%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+ + ++SPGGS + I+++ K+ KPV+ ++AAS GY ++CA++ I Sbjct: 66 AVAVAIVINSPGGSPAQSALVGDRIRQLSAKHEKPVLAFCEDVAASGGYWLACAADEIFV 125 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +++GSIGV+ + ++KLG+ + + K PF + V + + Sbjct: 126 SPGTVIGSIGVVSSSFGLTEAIEKLGLERRVHAAGTNKVRLDPFLPEKEEDVSWLSGMQA 185 Query: 184 SSYHWFVRLVSESRNIPY---DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + F+ V R D L +D +W G A ++G+ D VG Sbjct: 186 DIHQVFIDWVKTRRGAKLAGKDDELFNAD--VWIGKRAVELGVADAVG 231 >gi|186476640|ref|YP_001858110.1| peptidase S49 [Burkholderia phymatum STM815] gi|184193099|gb|ACC71064.1| peptidase S49 [Burkholderia phymatum STM815] Length = 292 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A+++S+ SPGG + I + ++ KP + ++E SA Y ++ A I Sbjct: 114 DKKVKAIVLSIDSPGGEVAGCFDLADLIYESRSVKPTLAILNESGYSAAYALASACEQIT 173 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T GS+GV+ + +DK G+++ +K KA+ + F+ ++ +A+ Q V Sbjct: 174 VPRTGGTGSVGVICMHVDQSKAIDKAGLTVTIIKYGDRKADGNQFNPLSKEALDRYQAEV 233 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D FV+ V+ +RN+ D + + + GA ++G D V +E ++SL Sbjct: 234 DEMGELFVQTVARNRNLSAD-VVRKTQATTFLGAAGVEIGFADAVMAPDEAFRSL 287 >gi|255318358|ref|ZP_05359591.1| putative protease SohB [Acinetobacter radioresistens SK82] gi|262378588|ref|ZP_06071745.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] gi|255304350|gb|EET83534.1| putative protease SohB [Acinetobacter radioresistens SK82] gi|262299873|gb|EEY87785.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] Length = 320 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 9/168 (5%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I+ A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIITA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + V + + K + F E P+ + + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGEYKRTVTMFGENTPEGKAKFEQELQQ 210 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ F V + R P ++ G W G +A + L+D + +E Sbjct: 211 THALFKHFVEKYR--PKLNVEKVATGEHWYGQDALDLNLVDELKTSDE 256 >gi|170770009|ref|ZP_02904462.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] gi|170770149|ref|ZP_02904602.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] gi|170120975|gb|EDS89906.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] gi|170121075|gb|EDS90006.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] Length = 501 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ VD+++ F V+ + + + ++ ++ G A K GL D Sbjct: 226 EVRQDMQQRVDAAHRMFAEKVAMYTGLSVE-AVTGTEAAVFEGQSAIKAGLAD 277 >gi|260844235|ref|YP_003222013.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|260868584|ref|YP_003234986.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] gi|257759382|dbj|BAI30879.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257764940|dbj|BAI36435.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] Length = 501 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ VD+++ F V+ + + + ++ ++ G A K GL D Sbjct: 226 EVRQDMQQRVDAAHRMFAEKVAMYTGLSVE-AVTGTEAAVFEGQSAIKAGLAD 277 >gi|330883334|gb|EGH17483.1| putative inner membrane peptidase [Pseudomonas syringae pv. glycinea str. race 4] Length = 178 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%) Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C N I++A +++GSIGV+ Q P V L K + + + + K Sbjct: 2 KVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTL 61 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + F E K + Q +D ++ F VS R P ++ G +W G A L+ Sbjct: 62 TVFGENTEKGREKFQQDLDITHDLFKNFVSSYR--PQLSIDEVATGEVWLGMAAVDKLLV 119 Query: 225 DVVGGQEE 232 D + +E Sbjct: 120 DELKTSDE 127 >gi|152985660|ref|YP_001348823.1| putative periplasmic protease [Pseudomonas aeruginosa PA7] gi|150960818|gb|ABR82843.1| probable protease [Pseudomonas aeruginosa PA7] Length = 341 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%) Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASN 119 +DD +++ L S GG + + +++ P+ V ++AAS GY+++C Sbjct: 122 GKDDE---VVLRLESGGGMVHGYGLAASQLARIRQAGVPLTVCVDKVAASGGYMMACIGE 178 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I++A +++GSIGV+ Q P V L K + + + + K + F E K + Q Sbjct: 179 RILSAPFAILGSIGVVAQLPNVHRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQ 238 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ ++ F V+ R P ++ G +W G A L+D Sbjct: 239 EDLEVTHELFKNFVAHYR--PQLNMDEIATGEVWLGQAALGKLLVD 282 >gi|304383386|ref|ZP_07365852.1| possible protease [Prevotella marshii DSM 16973] gi|304335554|gb|EFM01818.1| possible protease [Prevotella marshii DSM 16973] Length = 331 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 10/182 (5%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++L + + + + ++SPGG A+ + + ++ + KP++T +M S Sbjct: 121 SKQLAADLHAAEANPQISCHFLHINSPGGEAWYLDRLSETLRACQ--KPILTFYEQMCCS 178 Query: 110 AGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 AGY I C N I A + VG IG + + +P+ +KLG+ K++ + F Sbjct: 179 AGYYIGCHGNRIYALTDNDYVGCIGTMCSFYDFEPYFEKLGIKRVEAKATNSDLKNKTFD 238 Query: 169 EV-NPKAVQMMQDVVDSSYHWFVRLVSESRN----IPYDKTLVLSDGRIWTGAEAKKVGL 223 ++ + K + + D++D F+ V R+ +P D ++ G + +A ++GL Sbjct: 239 DLRHGKDEKFVHDILDPLNVQFLAEVRSQRSQLAELPDDAPVLR--GETFYTPQAVELGL 296 Query: 224 ID 225 D Sbjct: 297 TD 298 >gi|220934776|ref|YP_002513675.1| putative periplasmic protease [Thioalkalivibrio sp. HL-EbGR7] gi|219996086|gb|ACL72688.1| putative periplasmic protease [Thioalkalivibrio sp. HL-EbGR7] Length = 334 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 4/136 (2%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V +AAS GYL++ +N IVAA ++VGSIGV+ Q P V L + V I+ + K Sbjct: 164 VDRVAASGGYLMAAVANRIVAAPFAIVGSIGVVAQIPNVNRLLKRHDVDIEMHTAGQFKR 223 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKV 221 + E P+ + + ++ + F + R + DK L+ G W G +A + Sbjct: 224 TLTVLGENTPEGREKFKQELEEIHALFKGYLKRYRPTLDLDK---LATGEHWYGEQALPL 280 Query: 222 GLIDVVGGQEEVWQSL 237 GL+D + +++ L Sbjct: 281 GLVDELATSDDLLMGL 296 >gi|71019091|ref|XP_759776.1| hypothetical protein UM03629.1 [Ustilago maydis 521] gi|46099216|gb|EAK84449.1| hypothetical protein UM03629.1 [Ustilago maydis 521] Length = 949 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 5/154 (3%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 ++++ + S GG A E+I+ A+++V+ KPV+ AAS GY + A++ I+A E Sbjct: 420 SIVLRIDSGGGDVVASESIWDAVRRVREDYGKPVVASFGNTAASGGYYAASAADAILACE 479 Query: 126 TSLVGSIGVLFQYPYV-KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV P + + F DK + I++ ++ S E++ +D Sbjct: 480 NTVTGSIGVASLRPTITRAFFDKFNIGIQTFFTA--STSQSTLHELDEAQQAKSAKHIDE 537 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 Y F++ V + R+I + L+ GR+ TG A Sbjct: 538 MYDEFLQKVCDGRSISREVVENLAGGRVMTGLSA 571 >gi|56707601|ref|YP_169497.1| putative periplasmic protease [Francisella tularensis subsp. tularensis SCHU S4] gi|110670072|ref|YP_666629.1| putative periplasmic protease [Francisella tularensis subsp. tularensis FSC198] gi|224456672|ref|ZP_03665145.1| putative periplasmic protease [Francisella tularensis subsp. tularensis MA00-2987] gi|254370119|ref|ZP_04986125.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874422|ref|ZP_05247132.1| peptidase S49 family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604093|emb|CAG45092.1| peptidase family S49 protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320405|emb|CAL08475.1| peptidase family S49 protein [Francisella tularensis subsp. tularensis FSC198] gi|151568363|gb|EDN34017.1| hypothetical protein FTBG_01222 [Francisella tularensis subsp. tularensis FSC033] gi|254840421|gb|EET18857.1| peptidase S49 family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158759|gb|ADA78150.1| putative periplasmic protease [Francisella tularensis subsp. tularensis NE061598] Length = 339 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 22/209 (10%) Query: 32 EDNSPH--VARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGG--SAYA 82 +D+ P + I +G I+ SQ +E + ++ ++ +IV + SPGG + Y Sbjct: 88 QDDKPKQKIFVINFKGDIDASQ--VENLRNEVSAILAVANTEDEIIVRIDSPGGVVNGYG 145 Query: 83 GEAIFRAIQKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 F A Q + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P Sbjct: 146 ----FAAAQLERIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIP 201 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 ++ L+K G++++ S K + + + ++S + F + + R + Sbjct: 202 NIRELLEKNGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPS 261 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + DK ++ G W G +A ++GL+D + Sbjct: 262 LDIDK---VATGEYWFGKDALELGLVDKI 287 >gi|297519281|ref|ZP_06937667.1| putative periplasmic protease [Escherichia coli OP50] Length = 176 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 2/133 (1%) Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL + I+ + K Sbjct: 1 KVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTL 60 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + E + + ++ ++ ++ F V R P ++ G W G +A + GL+ Sbjct: 61 TLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLV 118 Query: 225 DVVGGQEEVWQSL 237 D + +EV SL Sbjct: 119 DEINTSDEVILSL 131 >gi|170742279|ref|YP_001770934.1| peptidase S49 [Methylobacterium sp. 4-46] gi|168196553|gb|ACA18500.1| peptidase S49 [Methylobacterium sp. 4-46] Length = 481 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 2/178 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A+++ L SPGG A +++V ++K V V+ MA+SA Y I+ ++ IV Sbjct: 139 DPRTKAILLDLESPGGEAVGAFEAAELVRQVASQKSVTALVNGMASSAAYAIASGASRIV 198 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM-MQDV 181 + T L GSIGV+ + + +L G+ + + K + +PF E P AV+ +Q Sbjct: 199 SIPTGLAGSIGVVLMHLDISEYLRAEGMKPTLIFAGDHKVDWNPF-EPLPDAVRADLQKE 257 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ Y FV V+ R ++ + ++ R + G EA K GL+D +G + V L A Sbjct: 258 VEGFYAKFVTTVAAGRPGLSEQAIRDTEARTFMGEEAIKAGLVDAIGTFDAVLADLSA 315 >gi|255021016|ref|ZP_05293069.1| Peptidase S49-like protein [Acidithiobacillus caldus ATCC 51756] gi|254969430|gb|EET26939.1| Peptidase S49-like protein [Acidithiobacillus caldus ATCC 51756] Length = 331 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 5/169 (2%) Query: 69 LIVSLSSPGG--SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ L S GG +AY G A + ++ + + V ++AAS GYL++ ++ IVA+ Sbjct: 123 VLLRLESGGGMVNAY-GLAAAQLLRLRAAQLHLTVLVDQVAASGGYLMAVTAHEIVASPF 181 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +LVGSIGV+ Q P +L + + + + K + F E Q +++ ++ + Sbjct: 182 ALVGSIGVVAQIPNFNRWLRERHIDFEQFTAGKYKRTVTLFGENTDAGRQKLREELEDIH 241 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 F V+E R P ++ G W G A+++GL+D + + V Q Sbjct: 242 AMFRHFVAEYR--PSLDLEQVATGEAWLGIRAQELGLVDRLATSDTVIQ 288 >gi|222112373|ref|YP_002554637.1| peptidase s49 [Acidovorax ebreus TPSY] gi|221731817|gb|ACM34637.1| peptidase S49 [Acidovorax ebreus TPSY] Length = 441 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 3/171 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY-LISCASNIIVAAET 126 A+++ + SPGG + + I+ KPV ++MA SA Y L+S AS + V A T Sbjct: 102 AILLDVDSPGGESGGVFDLADRIRSASRIKPVWAVANDMAFSAAYALVSAASRVFV-ART 160 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 VGSIGV+ + K GV +V + K + +P ++ +A +++ VD Y Sbjct: 161 GGVGSIGVIAMHIDQSVKDAKDGVRYTAVFAGERKNDLNPHEPISGEAHAVLKAEVDRVY 220 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 FV V+ R + D G ++ G +A GL D VGG ++ L Sbjct: 221 DLFVETVARHRGLDADAVRATEAG-LFFGPDAVGAGLADAVGGFDDALSQL 270 >gi|321272257|gb|ADW80142.1| phage minor capsid protein [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1] Length = 343 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 90/173 (52%), Gaps = 1/173 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E IE D S +++ + SPGG + I + +K +I ++ A SA Y I Sbjct: 70 EEIESALEDKSIETILLDIDSPGGEVNGVFDLADFIYSARGKKRIIAIANDDAYSAAYAI 129 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ + + TS VGSIGV+ + F +K G+ ++ + K + +P ++ ++ Sbjct: 130 ASSAEKVFVSRTSGVGSIGVIASHIDQSRFDEKQGIKYTTIFAGSRKNDLNPHEQMTSES 189 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ +Q VD Y FV+L++ +RN+ + + ++ ++ G +A ++GL D V Sbjct: 190 LESLQKEVDRLYEMFVQLIARNRNLSI-QAIKSTEAGLYFGEKAVEIGLADGV 241 >gi|300973765|ref|ZP_07172333.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|300410689|gb|EFJ94227.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] Length = 391 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|260910201|ref|ZP_05916878.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635705|gb|EEX53718.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 330 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 8/181 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++L+ + + T + ++SPGG A+ + + ++ KP+IT + S Sbjct: 120 SKQLVADLMAAEANPQITCHFLHVNSPGGDAWFLDRLDETLRACT--KPIITLYEHLCCS 177 Query: 110 AGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 AGY I+C N + A VG IG + + +P+ +KLG+ + K+ + F Sbjct: 178 AGYYIACHGNRVYALTANDYVGCIGTMCSFYDFQPYFEKLGIKLIEAKADKSDLKNKTFD 237 Query: 169 EVNP-KAVQMMQDVVDSSYHWFVRLVSESRNIPY---DKTLVLSDGRIWTGAEAKKVGLI 224 ++ K Q + D ++ F+ V R+ D VL G + AEA GL Sbjct: 238 DLRQGKPEQYVDDFLNPLNEQFLACVRSMRSGLAELGDDAPVLR-GETYLTAEAVTTGLC 296 Query: 225 D 225 D Sbjct: 297 D 297 >gi|54113939|gb|AAV29603.1| NT02FT1074 [synthetic construct] Length = 339 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 22/209 (10%) Query: 32 EDNSPH--VARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGG--SAYA 82 +D+ P + I +G I+ SQ +E + ++ ++ +IV + SPGG + Y Sbjct: 88 QDDKPKQKIFVINFKGDIDASQ--VENLRNEVSAILAVANTEDEIIVRIDSPGGVVNGYG 145 Query: 83 GEAIFRAIQKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 F A Q + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P Sbjct: 146 ----FAAAQLERIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIP 201 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 ++ L+K G++++ S K + + + ++S + F + + R + Sbjct: 202 NIRELLEKNGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPS 261 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + DK ++ G W G +A ++GL+D + Sbjct: 262 LDIDK---VATGEYWFGKDALELGLVDKI 287 >gi|118497149|ref|YP_898199.1| putative periplasmic protease [Francisella tularensis subsp. novicida U112] gi|194323447|ref|ZP_03057224.1| peptidase, S49 (protease IV) family [Francisella tularensis subsp. novicida FTE] gi|208778942|ref|ZP_03246288.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] gi|118423055|gb|ABK89445.1| peptidase family S49 protein [Francisella novicida U112] gi|194322302|gb|EDX19783.1| peptidase, S49 (protease IV) family [Francisella tularensis subsp. novicida FTE] gi|208744742|gb|EDZ91040.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] Length = 338 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%) Query: 41 IAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGG--SAYAGEAIFRAIQKV 93 I +G I+ SQ +E + ++ ++ +IV + SPGG + Y F A Q Sbjct: 98 INFKGDIDASQ--VENLRNEVSAILAVANTEDEIIVRIDSPGGVVNGYG----FAAAQLE 151 Query: 94 KNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 +++ S K + + + ++S + F + + R ++ DK ++ Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPSLDIDK---VAT 268 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +A ++GL+D + Sbjct: 269 GEYWFGKDALELGLVDKI 286 >gi|254372516|ref|ZP_04988005.1| hypothetical protein FTCG_00078 [Francisella tularensis subsp. novicida GA99-3549] gi|254373978|ref|ZP_04989460.1| peptidase family S49 protein [Francisella novicida GA99-3548] gi|151570243|gb|EDN35897.1| hypothetical protein FTCG_00078 [Francisella novicida GA99-3549] gi|151571698|gb|EDN37352.1| peptidase family S49 protein [Francisella novicida GA99-3548] gi|328676618|gb|AEB27488.1| peptidase family S49 protein [Francisella cf. novicida Fx1] Length = 338 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%) Query: 41 IAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGG--SAYAGEAIFRAIQKV 93 I +G I+ SQ +E + ++ ++ +IV + SPGG + Y F A Q Sbjct: 98 INFKGDIDASQ--VENLRNEVSAILAVANTEDEIIVRIDSPGGVVNGYG----FAAAQLE 151 Query: 94 KNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 +++ S K + + + ++S + F + + R ++ DK ++ Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPSLDIDK---VAT 268 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +A ++GL+D + Sbjct: 269 GEYWFGKDALELGLVDKI 286 >gi|323965411|gb|EGB60867.1| peptidase S49 [Escherichia coli M863] Length = 501 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D S +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADTSVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|190570700|ref|YP_001975058.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190570754|ref|YP_001975112.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190570768|ref|YP_001975126.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190356972|emb|CAQ54360.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357026|emb|CAQ54419.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357040|emb|CAQ54434.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 348 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 1/173 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E IE D S +++ + SPGG + I V+ +K +I ++ A SA Y I Sbjct: 70 EEIESALEDKSIETILLDIDSPGGEVNGVFDLADFIYGVRGKKRIIAIANDDAYSAAYAI 129 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ + TS VGSIGV+ + F +K G+ ++ + K + +P + ++ Sbjct: 130 ASSAEKVFVCRTSGVGSIGVIASHIDQSGFDEKQGIKYTTIFAGKRKNDLNPHEPMTSES 189 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ +Q VD Y FV+L++ +R + +K G ++ G +A ++GL D V Sbjct: 190 LESLQKEVDRLYEMFVQLIARNRGLSIEKIRSTEAG-LYFGEKAVEIGLADGV 241 >gi|327253287|gb|EGE64936.1| head-tail preconnector protein GP5 [Escherichia coli STEC_7v] Length = 501 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQKRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|134302463|ref|YP_001122433.1| putative periplasmic protease [Francisella tularensis subsp. tularensis WY96-3418] gi|134050240|gb|ABO47311.1| peptidase, S49 (protease IV) family protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 338 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%) Query: 41 IAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGG--SAYAGEAIFRAIQKV 93 I +G I+ SQ +E + ++ ++ +IV + SPGG + Y F A Q Sbjct: 98 INFKGDIDASQ--VENLRNEVSAILAVANTEDEIIVRIDSPGGVVNGYG----FAAAQLE 151 Query: 94 KNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSD 209 +++ S K + + + ++S + F + + R ++ DK ++ Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPSLDIDK---VAT 268 Query: 210 GRIWTGAEAKKVGLIDVV 227 G W G +A ++GL+D + Sbjct: 269 GEYWFGKDALELGLVDKI 286 >gi|74318647|ref|YP_316387.1| putative periplasmic protease [Thiobacillus denitrificans ATCC 25259] gi|74058142|gb|AAZ98582.1| serine protease SohB [Thiobacillus denitrificans ATCC 25259] Length = 333 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 9/170 (5%) Query: 68 ALIVSLSSPGG--SAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A++V L S GG + Y G A I+ + P+ V +AAS GYL++ ++ IVA+ Sbjct: 125 AVLVRLESGGGLVNRYGLGAAQLLRIRDAQ--LPLTVMVDSVAASGGYLMAAVADTIVAS 182 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +LVGSIGV+ Q P +L + + + K + F E +++ +D Sbjct: 183 PFALVGSIGVVAQTPNFHRWLRARDIDWEQFTAGQYKRTVTLFGENTETGRAKLREELDD 242 Query: 185 SYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + F V R + DK ++ G W G+ A ++GL+D + +E+ Sbjct: 243 IHALFRAFVQARRPQLDVDK---VATGETWLGSRALELGLVDEIATSDEL 289 >gi|149913315|ref|ZP_01901848.1| Peptidase U7 [Roseobacter sp. AzwK-3b] gi|149812435|gb|EDM72264.1| Peptidase U7 [Roseobacter sp. AzwK-3b] Length = 474 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 1/173 (0%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +IE +RD S A+ + + S GG + ++ ++ KPV V E A SAGY ++ Sbjct: 113 QIEAAARDPSVRAVALEIDSFGGEVAGVFDLADRLRALRRNKPVWAFVAEHAFSAGYALA 172 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I+ T VGSIGV+ + + LD+ GV + + S K + +P+ + Sbjct: 173 SQADRILLPRTGAVGSIGVVVMHADLSSQLDQNGVRVTLIHSGQHKVDGNPYEPLPESVR 232 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVV 227 +Q +D F V+ R+ ++ L ++ + GA+A GL D V Sbjct: 233 DDIQREIDVLRFLFAETVAAGRSGRLNQDAALATEAATFRGADAVSAGLADEV 285 >gi|327537611|gb|EGF24323.1| signal peptide peptidase SppA, 36K type [Rhodopirellula baltica WH47] Length = 397 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/279 (19%), Positives = 115/279 (41%), Gaps = 40/279 (14%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 E++ I D + A+++ ++SPGG A + + ++ +K+ + PV+ + Y Sbjct: 109 EKMRHIESDPTILAVVLRINSPGGGVTASDMLAHQLKHLKSNRNIPVVACLMTTGTGGAY 168 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ ++ IVA TS+VG IGV+ ++ L + + +KS SP + Sbjct: 169 YLATHADAIVAHPTSVVGGIGVILNNYNMEDTLGQFNIVSLPIKSGDKIDVGSPERMMQR 228 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESR-------------NIPYDKT--------------- 204 + ++Q + D + F+ V SR N+ Sbjct: 229 EERDLLQSMADEFHQRFIEQVRSSRGERLVVTSEVDESNLDESDANKLDAGDLDRDDVDD 288 Query: 205 -------LVLSDGRIWTGAEAKKVGLIDVVGGQEE---VWQSLYALGVDQSIRKIKDWNP 254 L+ DGR+ +G A+K+GL+D G ++ + + L ++ ++ N Sbjct: 289 AELKPSELIPFDGRVVSGLHAQKIGLVDQTGYLDDAVSLAGRMAGLSSSPALVLLRRDND 348 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 F N+ ++S+L +P + ++ + +W P Sbjct: 349 RAMSEFDVTPNVPMTSILPIQLPGLDRSSMPTFLYLWQP 387 >gi|320654748|gb|EFX22727.1| putative head protein/prohead protease [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 184 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D +++ + SPGG A I +++ +KPV ++ A SA L++ A + + Sbjct: 5 DSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRL 64 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +TS +GSIGV+ + L + GV I + S K + + F + + Q MQ + Sbjct: 65 VTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRI 124 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 D++ F V+ + D + ++ ++ G + GL D Sbjct: 125 DAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 166 >gi|187932068|ref|YP_001892053.1| putative periplasmic protease [Francisella tularensis subsp. mediasiatica FSC147] gi|187712977|gb|ACD31274.1| peptidase family S49 protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 338 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 26/199 (13%) Query: 41 IAIRGQIEDSQELIERIERISRDDSAT--------ALIVSLSSPGG--SAYAGEAIFRAI 90 I +G I+ SQ +E + + SA +IV + SPGG + Y F A Sbjct: 98 INFKGDIDASQ-----VENLRNEVSAILAVANTEDEIIVRIDSPGGVVNGYG----FAAA 148 Query: 91 QKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 Q + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K Sbjct: 149 QLERIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEK 208 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLV 206 G++++ S K + + + ++S + F + + R ++ DK Sbjct: 209 NGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPSLDIDK--- 265 Query: 207 LSDGRIWTGAEAKKVGLID 225 ++ G W G +A ++GL+D Sbjct: 266 VATGEYWFGKDALELGLVD 284 >gi|46581275|ref|YP_012083.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] gi|46450696|gb|AAS97343.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] gi|311234940|gb|ADP87794.1| peptidase S49 [Desulfovibrio vulgaris RCH1] Length = 439 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGE--AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D A+++ ++SPGG+ + A + ++ K KP+ + + ASA Y+I A+ Sbjct: 111 DRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMASAAYMIGSATGR 170 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 ++A T+ VGSIGV+ Y + +K G+S + + KA +P + + +Q+ Sbjct: 171 VLAPATATVGSIGVISVYENWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQE 230 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + Y F VS S + +DG+++ +EA + GL+ + Sbjct: 231 RLTALYRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQ-GLVTAI 276 >gi|213019703|ref|ZP_03335508.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|213019745|ref|ZP_03335549.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994651|gb|EEB55295.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994744|gb|EEB55387.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 341 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 1/173 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E IE D S +++ + SPGG + I V+ +K +I ++ A SA Y I Sbjct: 63 EEIESALEDKSIETILLDIDSPGGEVNGVFDLADFIYGVRGKKRIIAIANDDAYSAAYAI 122 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ + TS VGSIGV+ + F +K G+ ++ + K + +P + ++ Sbjct: 123 ASSAEKVFVCRTSGVGSIGVIASHIDQSGFDEKQGIKYTTIFAGKRKNDLNPHEPMTSES 182 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ +Q VD Y FV+L++ +R + +K G ++ G +A ++GL D V Sbjct: 183 LESLQKEVDRLYEMFVQLIARNRGLSIEKIRSTEAG-LYFGEKAVEIGLADGV 234 >gi|187733678|ref|YP_001879583.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|187430670|gb|ACD09944.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] Length = 501 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVTCLQQAMADSQVRGILLDIDSPGGQAAGVFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TSL+GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSLIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|321272319|gb|ADW80201.1| minor capsid protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB] Length = 336 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 90/173 (52%), Gaps = 1/173 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E IE D S +++ + SPGG + I + +K +I ++ A SA Y I Sbjct: 63 EEIESALEDKSIETILLDIDSPGGEVNGVFDLADFIYSARGKKRIIAIANDDAYSAAYAI 122 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ + + TS VGSIGV+ + F +K G+ ++ + K + +P ++ ++ Sbjct: 123 ASSAEKVFVSRTSGVGSIGVIASHIDQSRFDEKQGIKYTTIFAGSRKNDLNPHEQMTSES 182 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ +Q VD Y FV+L++ +RN+ + + ++ ++ G +A ++GL D V Sbjct: 183 LESLQKEVDRLYEMFVQLIARNRNLSI-QAIKSTEAGLYFGEKAVEIGLADGV 234 >gi|309793297|ref|ZP_07687724.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308122884|gb|EFO60146.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 501 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|218700220|ref|YP_002407849.1| head-tail preconnector protein GP5 [Escherichia coli IAI39] gi|218370206|emb|CAR18001.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli IAI39] Length = 501 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ VD+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRVDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|212712418|ref|ZP_03320546.1| hypothetical protein PROVALCAL_03507 [Providencia alcalifaciens DSM 30120] gi|212684941|gb|EEB44469.1| hypothetical protein PROVALCAL_03507 [Providencia alcalifaciens DSM 30120] Length = 483 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D +++ + SPGG A + ++ KP+ H+MA SA L++ A + + Sbjct: 106 DPEVKGILLDIDSPGGQASGAFDCADMVARLGQEKPIWALCHDMACSAAMLLASACSRRL 165 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +T+ +GSIGV+ + + L + GV I + S K + + F + + Q + Sbjct: 166 VTQTAKIGSIGVMMAHANREQQLAQTGVDITLIYSGAHKVDGNAFQALPERVRADFQRQI 225 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 D + FV+ V+ +P + T+ ++ + G VGL D Sbjct: 226 DEARTLFVQKVAGYLGVP-ESTIRETEAATYQGQAGIDVGLAD 267 >gi|2499883|sp|Q44600|SOHB_BUCSC RecName: Full=Probable protease sohB gi|769834|gb|AAA92792.1| Soh B protease [Buchnera aphidicola] Length = 305 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 10/202 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ--ELIERIERI---SRDDSATALIVSLSSPGGSAYAGE 84 ++ N+P + + +G + S+ L E I I ++++ +++ L S GG + Sbjct: 96 YLNQNNPILYVLDFKGNVSASEVTSLREEISAIILAAKENDE--VLLRLESGGGVIHGYG 153 Query: 85 AIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++ + +T V ++AAS GY+++C +N I+AA S++GSIGV+ Q P Sbjct: 154 LASSQLSRLREKNIRLTVSVDKIAASGGYMMACVANYIIAAPFSVIGSIGVVAQIPNFNK 213 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K V ++ S K + F E +A + ++ ++ F V R P Sbjct: 214 LLKKNNVDMELHTSGLYKRTLTVFGENTKEAREKFCKDLNFTHVLFKEFVHSMR--PSLN 271 Query: 204 TLVLSDGRIWTGAEAKKVGLID 225 +S G W G A + LID Sbjct: 272 IDEVSTGEHWFGTTALEKKLID 293 >gi|187733565|ref|YP_001879921.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|187430557|gb|ACD09831.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] Length = 501 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|323962536|gb|EGB58116.1| peptidase S49 [Escherichia coli H489] Length = 501 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|320176913|gb|EFW51941.1| Head-tail preconnector protein GP5 [Shigella dysenteriae CDC 74-1112] Length = 490 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|300937014|ref|ZP_07151882.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300457896|gb|EFK21389.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] Length = 308 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPE 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EIRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|46578615|ref|YP_009423.1| minor capsid protein C, degenerate [Desulfovibrio vulgaris str. Hildenborough] gi|46448026|gb|AAS94682.1| minor capsid protein C, degenerate [Desulfovibrio vulgaris str. Hildenborough] Length = 439 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGE--AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D A+++ ++SPGG+ + A + ++ K KP+ + + ASA Y+I A+ Sbjct: 111 DRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMASAAYMIGSATGR 170 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 ++A T+ VGSIGV+ Y + +K G+S + + KA +P + + +Q+ Sbjct: 171 VLAPATATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQE 230 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + Y F VS S + +DG+++ +EA + GL+ + Sbjct: 231 RLTALYRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQ-GLVTAI 276 >gi|262368527|ref|ZP_06061856.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262316205|gb|EEY97243.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 320 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 9/161 (5%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R + V ++AAS GY+++C +N I+AA Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLRDAGFNLTICVDKVAASGGYMMACIANQIIAA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + + + + K + F E + ++ + Sbjct: 151 PFAVVGSIGVVAQVPNFNRLLKEHNIDFELYTAGQYKRTVTMFGENTAEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ F V + R P ++ G W G +A + L+D Sbjct: 211 THVLFKHFVEKYR--PQLNVEKVATGEHWYGQDALDLNLVD 249 >gi|307310225|ref|ZP_07589874.1| peptidase S49 [Sinorhizobium meliloti BL225C] gi|306899777|gb|EFN30402.1| peptidase S49 [Sinorhizobium meliloti BL225C] Length = 301 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 2/181 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I RDD A++ + S GG I ++ KP I + + A SAGYL++ Sbjct: 115 IERDD-IKAVVFEVDSYGGEVTGAFDCAEQIFELSQLKPTIAVLTDHACSAGYLLASPCR 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +V +T + GSIGV+ + + +L K G+ + +K+ KA+ +P+ + +Q Sbjct: 174 QLVIPQTGICGSIGVISMHVDMSAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQEL 233 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ F V+ R ++ + ++ R++ G +A GL+D V +V ++ Sbjct: 234 AELEELRVEFAATVARYRAGRLTQQSALATEARVYRGQKAVDAGLVDAVARPSQVLEAFE 293 Query: 239 A 239 A Sbjct: 294 A 294 >gi|289208920|ref|YP_003460986.1| peptidase S49 [Thioalkalivibrio sp. K90mix] gi|288944551|gb|ADC72250.1| peptidase S49 [Thioalkalivibrio sp. K90mix] Length = 356 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 84/159 (52%), Gaps = 5/159 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +IV L SPGG + + +++ + +T V +AAS GY+++ ++ IVAA + Sbjct: 147 VIVCLESPGGLVPSYGLAASQLARLREKGLDLTVAVDRVAASGGYMMAAVADRIVAAPFA 206 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ Q P + +L++ + ++ + + K + E + + ++ +D ++ Sbjct: 207 VLGSIGVVAQIPNLHRWLERHDIDVELLTAGEYKRTLTVLGENTDEGRRKFREQLDEAHD 266 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F +S R ++ +K ++ G W G +A ++GL D Sbjct: 267 QFKTFLSRYRPSLDLEK---VATGEHWYGEQAHQLGLAD 302 >gi|218704576|ref|YP_002412095.1| Head-tail preconnector protein GP5 [Escherichia coli UMN026] gi|293404456|ref|ZP_06648450.1| scaffold protein GP6 [Escherichia coli FVEC1412] gi|298380232|ref|ZP_06989837.1| scaffold protein GP6 [Escherichia coli FVEC1302] gi|300895932|ref|ZP_07114503.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|218431673|emb|CAR12555.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli UMN026] gi|291429042|gb|EFF02067.1| scaffold protein GP6 [Escherichia coli FVEC1412] gi|298279930|gb|EFI21438.1| scaffold protein GP6 [Escherichia coli FVEC1302] gi|300360143|gb|EFJ76013.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] Length = 482 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|323969481|gb|EGB64773.1| peptidase S49 [Escherichia coli TA007] Length = 501 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D + +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADTAVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHLSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPE 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-VVTGTEAAVFEGQSGIEAGLAD 277 >gi|218694807|ref|YP_002402474.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli 55989] gi|218351539|emb|CAU97251.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli 55989] Length = 501 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|323160792|gb|EFZ46724.1| minor capsid protein C [Escherichia coli E128010] Length = 354 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGTHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|83952481|ref|ZP_00961212.1| peptidase, family S49 [Roseovarius nubinhibens ISM] gi|83836154|gb|EAP75452.1| peptidase, family S49 [Roseovarius nubinhibens ISM] Length = 280 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 4/176 (2%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVA 123 A AL+++ SPGGS I I+++ K PV V ++AAS GY ++ A++ I Sbjct: 64 AVALVIN--SPGGSPVQSALIAARIRRLSEEKGVPVHAFVEDVAASGGYWLAVAADDIWV 121 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S++GSIGV+ FL + G+ + + K+ PF + V ++ ++ Sbjct: 122 DYGSILGSIGVISAGFGAHVFLARQGIERRVYTAGESKSTLDPFQPEKKEDVARLESLLA 181 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + F+ V R + L G W G +A ++GL D E + LY Sbjct: 182 QMHTGFIDHVKARRGDKLSRDEKLFTGEFWIGRQAVELGLADGEAHLEPKLKELYG 237 >gi|301017487|ref|ZP_07182178.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] gi|300400179|gb|EFJ83717.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] Length = 501 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D+++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|307942416|ref|ZP_07657767.1| minor capsid protein C [Roseibium sp. TrichSKD4] gi|307774702|gb|EFO33912.1| minor capsid protein C [Roseibium sp. TrichSKD4] Length = 281 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 5/179 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A+ + +SSPGG + I++ + KP++ V +++ASA + IS A+ +I Sbjct: 98 DPDIRAIALDVSSPGGMVSGCFELVEFIRQARGEKPIMAIVRDLSASAAFAISSAAEVIT 157 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T VGSIGV+ + +G+ + + S K + +P+ E+ + Q V Sbjct: 158 VPNTGSVGSIGVVRMHGDFSKMFSDVGLKVTLIHSGARKVDGNPYQELPDTVRESWQASV 217 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG----AEAKKVGLIDVVGGQEEVWQSL 237 D+ F V+ R I +T++ ++ ++ G A A+++GLID + ++ + SL Sbjct: 218 DAVRDLFADHVAAGRGIDR-QTVLETEAELYDGPLNLARAREIGLIDQIMSPDKAFASL 275 >gi|89256882|ref|YP_514244.1| putative periplasmic protease [Francisella tularensis subsp. holarctica LVS] gi|115315261|ref|YP_763984.1| putative periplasmic protease [Francisella tularensis subsp. holarctica OSU18] gi|156503057|ref|YP_001429122.1| putative periplasmic protease [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009223|ref|ZP_02274154.1| peptidase family S49 protein [Francisella tularensis subsp. holarctica FSC200] gi|290953621|ref|ZP_06558242.1| putative periplasmic protease [Francisella tularensis subsp. holarctica URFT1] gi|295313054|ref|ZP_06803748.1| putative periplasmic protease [Francisella tularensis subsp. holarctica URFT1] gi|89144713|emb|CAJ80044.1| peptidase family S49 protein [Francisella tularensis subsp. holarctica LVS] gi|115130160|gb|ABI83347.1| S49 family SohB endopeptidase [Francisella tularensis subsp. holarctica OSU18] gi|156253660|gb|ABU62166.1| peptidase, S49 (protease IV) family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 338 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 26/201 (12%) Query: 41 IAIRGQIEDSQELIERIERISRDDSAT--------ALIVSLSSPGG--SAYAGEAIFRAI 90 I +G I+ SQ +E + + SA +IV + SPGG + Y F A Sbjct: 98 INFKGDIDASQ-----VENLRNEVSAILAVANIEDEIIVRIDSPGGVVNGYG----FAAA 148 Query: 91 QKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 Q + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K Sbjct: 149 QLERIRQVGINLTVCIDKVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEK 208 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLV 206 G++++ S K + + + ++S + F + + R ++ DK Sbjct: 209 NGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPSLDIDK--- 265 Query: 207 LSDGRIWTGAEAKKVGLIDVV 227 ++ G W G +A ++GL+D + Sbjct: 266 VATGEYWFGKDALELGLVDKI 286 >gi|58698082|ref|ZP_00373006.1| hypothetical protein WwAna1566 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630941|ref|YP_002727732.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|58535439|gb|EAL59514.1| hypothetical protein WwAna1566 [Wolbachia endosymbiont of Drosophila ananassae] gi|225592922|gb|ACN95941.1| minor capsid protein C, putative [Wolbachia sp. wRi] Length = 360 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 93/177 (52%), Gaps = 1/177 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IE D+ +I+ + SPGG + + I + + K ++ ++ A SA Sbjct: 68 EKIREEIEEALIDEEVETIILDIDSPGGEVNSLFDLSDFIYEARGLKKIVAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ ++ TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++++ +Q+ V Y FV LV+ +RN+ + T+ ++ ++ G +A ++GL D V Sbjct: 188 TSESLESLQEEVGRLYEMFVELVARNRNLSTE-TIKSTEAGLYFGEKAIEIGLADEV 243 >gi|117623499|ref|YP_852412.1| putative capsid assembly protein of prophage [Escherichia coli APEC O1] gi|218558219|ref|YP_002391132.1| head-tail preconnector protein GP5 [Escherichia coli S88] gi|115512623|gb|ABJ00698.1| putative capsid assembly protein of prophage [Escherichia coli APEC O1] gi|218364988|emb|CAR02692.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli S88] gi|323949753|gb|EGB45638.1| peptidase S49 [Escherichia coli H252] Length = 501 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|149203059|ref|ZP_01880030.1| peptidase S49 [Roseovarius sp. TM1035] gi|149143605|gb|EDM31641.1| peptidase S49 [Roseovarius sp. TM1035] Length = 262 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 2/185 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IE+ A+ + ++SPGGS I I+++ K PV V ++AAS GY + Sbjct: 37 IEKAFARGKPVAVALVINSPGGSPVQSSLIAARIRRLAEEKKIPVHAFVEDVAASGGYWL 96 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I +S++GSIGV+ FL + G+ + + K+ PF P+ Sbjct: 97 AVAADDIWVDASSVLGSIGVISAGFGANEFLARQGIERRIYTAGKSKSTLDPFMPEKPED 156 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 V ++ +++ + F+ V R L G W G+ + ++GL D + Sbjct: 157 VTRLKSILEDIHAAFITHVKSRRGARLRDDPDLFTGEFWLGSLSVELGLADGIAHLLPKL 216 Query: 235 QSLYA 239 + LY Sbjct: 217 KELYG 221 >gi|315295105|gb|EFU54440.1| putative signal peptide peptidase SppA [Escherichia coli MS 153-1] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|91210342|ref|YP_540328.1| bacteriophage head-tail preconnector protein gp5 [Escherichia coli UTI89] gi|117623353|ref|YP_852266.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli APEC O1] gi|218558060|ref|YP_002390973.1| head-tail preconnector protein GP5 [Escherichia coli S88] gi|549296|sp|P36273|VG05_BPP21 RecName: Full=Head-tail preconnector protein GP5; AltName: Full=Putative peptidase GP5; Contains: RecName: Full=Scaffold protein GP6; AltName: Full=Head protein GP6 gi|423861|pir||JN0539 head protein gp5 - phage 21 gi|215459|gb|AAA32343.1| head-tail preconnector gp5 [Phage 21] gi|91071916|gb|ABE06797.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli UTI89] gi|115512477|gb|ABJ00552.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli APEC O1] gi|218364829|emb|CAR02521.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli S88] gi|307627348|gb|ADN71652.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli UM146] gi|323953610|gb|EGB49475.1| peptidase S49 [Escherichia coli H252] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|91210523|ref|YP_540509.1| putative prophage capsid assembly protein [Escherichia coli UTI89] gi|187732704|ref|YP_001880064.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|91072097|gb|ABE06978.1| putative capsid assembly protein of prophage [Escherichia coli UTI89] gi|187429696|gb|ACD08970.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|294489477|gb|ADE88233.1| head-tail preconnector protein [Escherichia coli IHE3034] gi|307627191|gb|ADN71495.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli UM146] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|315285962|gb|EFU45400.1| putative signal peptide peptidase SppA [Escherichia coli MS 110-3] Length = 494 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|190571676|ref|YP_001976034.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357948|emb|CAQ55411.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 345 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 73 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSA 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ + + TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 133 AYAIASSAEKVFVSRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPM 192 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++++ +Q VD Y FV+L++ +RN+ + + ++ ++ G +A ++GL D V Sbjct: 193 TSESLESLQKEVDRLYEMFVQLIARNRNLSIE-AIKSTEAGLYFGEKAVEIGLADGV 248 >gi|291285789|ref|YP_003502607.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] gi|290765662|gb|ADD59623.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVSCLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|331666075|ref|ZP_08366969.1| head-tail preconnector protein GP5 [Escherichia coli TA143] gi|331057126|gb|EGI29120.1| head-tail preconnector protein GP5 [Escherichia coli TA143] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|26247441|ref|NP_753481.1| putative capsid assembly protein of prophage [Escherichia coli CFT073] gi|227886459|ref|ZP_04004264.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli 83972] gi|300992399|ref|ZP_07179897.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|301046454|ref|ZP_07193609.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|26107842|gb|AAN80041.1|AE016759_315 Putative capsid assembly protein of prophage [Escherichia coli CFT073] gi|227836663|gb|EEJ47129.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli 83972] gi|300301568|gb|EFJ57953.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|300305350|gb|EFJ59870.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|307553180|gb|ADN45955.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli ABU 83972] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|332978457|gb|EGK15170.1| protease SohB [Psychrobacter sp. 1501(2011)] Length = 332 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 IS + +++ L S GG + G A + ++ + + V ++AAS GY+++C + Sbjct: 91 ISTANKGDEVVLRLESGGGMVHGYGLAAAQLVRLKEAGLTLTVCVDKIAASGGYMMACVA 150 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+AA ++VGSIGV+ Q P +L K + + + K + F E + + Sbjct: 151 DKILAAPFAVVGSIGVVSQMPNFNKWLKKHDIDYEMFTAGEYKRTVTMFGENDEEDRAKY 210 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ ++ ++ F V+ R P +++G W G +A K+ L+D Sbjct: 211 KEELEQTHELFKHFVTTYR--PQLDLSKVANGDHWYGEDALKLNLVD 255 >gi|319764217|ref|YP_004128154.1| peptidase s49 [Alicycliphilus denitrificans BC] gi|317118778|gb|ADV01267.1| peptidase S49 [Alicycliphilus denitrificans BC] Length = 451 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 3/174 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ SPGG A + + ++ RKP+ MAASA YL A+ T Sbjct: 122 AVLLVYDSPGGEAQGAFEYAQRVHAMRGRKPLWAISDGMAASAAYLGGSAAEQFAITSTG 181 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM-QDVVDSSY 186 + GSIGV+ ++ + LD G+++ + + K + +P+ E P++V+ Q +D+ Y Sbjct: 182 IAGSIGVVARHVDLSRALDAEGITVTHIFAGSHKVDGNPY-EPLPESVRKDWQAEIDNLY 240 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 F+ V+ R I + + + +TG A L D + + + L AL Sbjct: 241 GMFIDAVATHRGIDV-RAVRATQAATYTGQAAVDARLADRIATTDSLIAELAAL 293 >gi|281178282|dbj|BAI54612.1| putative phage capsid assembly protein [Escherichia coli SE15] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|320194291|gb|EFW68922.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|218507288|ref|ZP_03505166.1| peptidase S49 [Rhizobium etli Brasil 5] Length = 159 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 10/167 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD-SATALIVS 72 M+++++ + +S V+D I G S E + R ++ D S A++++ Sbjct: 1 MIAVISFFGIVAQHASQVDD---------ISGPGGTSTERVANSYRAAKSDPSVKAIVIN 51 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG+ + + I + KPVI +V+ + ASA Y ++ + + IV ++ GSI Sbjct: 52 FDSPGGNVSGVQVLADEIFNGRGDKPVIAQVNSLCASAAYWVASSCDEIVMTPGAMAGSI 111 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 GV + V +D G+ + + K E + F ++ +A Q Q Sbjct: 112 GVYSLHQDVSRAVDAAGLKFTFISAGKYKVEGNAFEPLSDEAAQAAQ 158 >gi|126729086|ref|ZP_01744900.1| probable bacteriophage-related protein [Sagittula stellata E-37] gi|126710076|gb|EBA09128.1| probable bacteriophage-related protein [Sagittula stellata E-37] Length = 340 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 1/122 (0%) Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + VGSIGV+ + LD GV++ ++S P KAE P+ ++ A Sbjct: 59 ADSITVTRSGGVGSIGVIITHVEYSCALDTRGVTVTPIRSKPRKAESGPYQALSKAAQAK 118 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 MQ VD S+ FV LV+ +R + + + +D + EA + GL D +G ++ + Sbjct: 119 MQASVDFSHSEFVALVARNRGM-SEADVDATDALTFLAHEAVENGLADQIGSTDDALAAF 177 Query: 238 YA 239 A Sbjct: 178 AA 179 >gi|160431862|ref|YP_001551976.1| putative peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|260752171|ref|YP_003237686.1| signal peptide peptidase [Escherichia coli O111:H- str. 11128] gi|159885403|dbj|BAF93007.1| putative peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|257767641|dbj|BAI39135.1| signal peptide peptidase [Escherichia coli O111:H- str. 11128] Length = 393 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 9/151 (5%) Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 AG F I ++N KP+I V + ASA Y ++ I A ++L GSIGV + Sbjct: 177 AGSGHF--ISDMENSYKPIIVSVKGICASACYYAVSPADAIFADSSALTGSIGVRMDHWN 234 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESR-- 197 + +D +GV + + + K P+ ++ MQ ++D+ + F+ V + R Sbjct: 235 LSRVMDTVGVKNEPLTAGEFKDALDPYHPLSDATRDFMQKQILDAMHEQFIADVEQGRGK 294 Query: 198 ---NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + P + L GR+WT +A + GLID Sbjct: 295 KLLSRPEADAVALYSGRVWTTQQAIRYGLID 325 >gi|240850472|ref|YP_002971870.1| phage protein Gp18 [Bartonella grahamii as4aup] gi|240267595|gb|ACS51183.1| phage protein Gp18 [Bartonella grahamii as4aup] Length = 351 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 16/215 (7%) Query: 68 ALIVSLSSPGGSAYAGEAI---FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+++ + S GG A + F+A+ K K KP+ +E A SA Y I+C+++ I A Sbjct: 105 AVLLDIDSGGGEAGGVFDLVEEFQALSK-KYDKPIWAHANEFACSAAYAIACSASQIWVA 163 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 T +VGSIGV+ + +K G V K +P ++ A MQ Sbjct: 164 RTGVVGSIGVVCAHLDQSRADEKHGHKWTFVFEGDHKVHGNPHEPLSDTAQIKMQADCAL 223 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 Y FV LV+++R + D + + + G++A +GL D G + Q+L AL Sbjct: 224 LYEMFVDLVAQNRRLNAD-AIRDTKAETFIGSQAITLGLADAQG---TLAQALEALTDSI 279 Query: 245 SIRKIKDWNPPKNYWFCD--------LKNLSISSL 271 S +N W +K LS SS+ Sbjct: 280 SQNPTATTKEGQNTWHAHNTALKKMMMKKLSTSSM 314 >gi|260856233|ref|YP_003230124.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|260866916|ref|YP_003233318.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] gi|257754882|dbj|BAI26384.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|257763272|dbj|BAI34767.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] gi|323156570|gb|EFZ42718.1| head-tail preconnector GP5 [Escherichia coli EPECa14] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|193070040|ref|ZP_03050987.1| head-tail preconnector protein GP5 [Escherichia coli E110019] gi|192956637|gb|EDV87093.1| head-tail preconnector protein GP5 [Escherichia coli E110019] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|331672143|ref|ZP_08372936.1| head-tail preconnector protein GP5 [Escherichia coli TA280] gi|331070691|gb|EGI42053.1| head-tail preconnector protein GP5 [Escherichia coli TA280] Length = 501 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPE 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|260577051|ref|ZP_05845030.1| peptidase S49 [Rhodobacter sp. SW2] gi|259020721|gb|EEW24038.1| peptidase S49 [Rhodobacter sp. SW2] Length = 448 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 3/138 (2%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I+ + +KPV V E A SAGY+++ ++ I+ T VGSIGV+ + + LD+ G Sbjct: 149 IRAARAQKPVRAFVAEHALSAGYVLASQADRIILPRTGAVGSIGVVALHTDMSGALDQKG 208 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQ-MMQDVVDSSYHWFVRLVSESRNIPYDKTLVL- 207 +++ + + K + +P+ + P+AV+ MQ ++ F R V++ R D L Sbjct: 209 IAVTLIHAGSHKVDANPYQPL-PEAVRSRMQAELEELRLLFARTVADGRGDRLDVARALG 267 Query: 208 SDGRIWTGAEAKKVGLID 225 ++ ++ G A GL D Sbjct: 268 TEAAVFRGEAAVHAGLAD 285 >gi|289582290|ref|YP_003480756.1| peptidase S49 [Natrialba magadii ATCC 43099] gi|289531843|gb|ADD06194.1| peptidase S49 [Natrialba magadii ATCC 43099] Length = 328 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 ++S A+++ + SPGG A E ++ A+ + PV+T V M S Y +S ++ + Sbjct: 74 ENESIDAVVLDVDSPGGGVTASEQLYLAVDRTAAEMPVVTSVQSMGTSGAYYMSAPTDEM 133 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 + +S VGSIGV + + S PM E + + ++D Sbjct: 134 YVSPSSTVGSIGVRATH----------------LDSPPMDGEVTTGPDKGSMTADQVKDQ 177 Query: 182 VDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + F+ V E R + T LS +++ G EA + GL D +G E Sbjct: 178 TEQMKQTFLGSVLEHRGDELELTERELSYAKVYIGTEAVENGLADEIGDTE 228 >gi|15801775|ref|NP_287793.1| putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 EDL933] gi|15830362|ref|NP_309135.1| head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|15831986|ref|NP_310759.1| head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|168751220|ref|ZP_02776242.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4113] gi|168754268|ref|ZP_02779275.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|168757627|ref|ZP_02782634.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|168763183|ref|ZP_02788190.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|168763888|ref|ZP_02788895.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|168767447|ref|ZP_02792454.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|168770248|ref|ZP_02795255.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|168777049|ref|ZP_02802056.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|168777492|ref|ZP_02802499.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|168778046|ref|ZP_02803053.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|168780966|ref|ZP_02805973.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|168783394|ref|ZP_02808401.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|168784264|ref|ZP_02809271.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|168787454|ref|ZP_02812461.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|168789357|ref|ZP_02814364.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|168801276|ref|ZP_02826283.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|168802152|ref|ZP_02827159.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|195935207|ref|ZP_03080589.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. EC4024] gi|195939765|ref|ZP_03085147.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. EC4024] gi|208806693|ref|ZP_03249030.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208810278|ref|ZP_03252154.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208811228|ref|ZP_03253038.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208815162|ref|ZP_03256341.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208817055|ref|ZP_03258175.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208820900|ref|ZP_03261220.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|208822761|ref|ZP_03263080.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|209395709|ref|YP_002271108.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|209398436|ref|YP_002269682.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|217325919|ref|ZP_03442003.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|217329576|ref|ZP_03445655.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|254792211|ref|YP_003077048.1| capsid assembly protein [Escherichia coli O157:H7 str. TW14359] gi|254793644|ref|YP_003078481.1| putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 str. TW14359] gi|261225748|ref|ZP_05940029.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O157:H7 str. FRIK2000] gi|261257965|ref|ZP_05950498.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O157:H7 str. FRIK966] gi|12515353|gb|AAG56407.1|AE005368_13 putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 str. EDL933] gi|13360568|dbj|BAB34531.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|13362200|dbj|BAB36155.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|187766864|gb|EDU30708.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|187767278|gb|EDU31122.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|187767637|gb|EDU31481.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|188014675|gb|EDU52797.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4113] gi|188998532|gb|EDU67522.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|188999298|gb|EDU68284.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|189001214|gb|EDU70200.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|189355418|gb|EDU73837.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|189358337|gb|EDU76756.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|189360828|gb|EDU79247.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|189363243|gb|EDU81662.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|189366001|gb|EDU84417.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|189366559|gb|EDU84975.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|189371025|gb|EDU89441.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|189372590|gb|EDU91006.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|189375824|gb|EDU94240.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|189376524|gb|EDU94940.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|208724335|gb|EDZ74044.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208724794|gb|EDZ74501.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208726494|gb|EDZ76095.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208731398|gb|EDZ80087.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208731810|gb|EDZ80498.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208738246|gb|EDZ85929.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|208741023|gb|EDZ88705.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|209157109|gb|ACI34542.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|209159836|gb|ACI37269.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|217317344|gb|EEC25773.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|217322140|gb|EEC30564.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|254591611|gb|ACT70972.1| capsid assembly protein [Escherichia coli O157:H7 str. TW14359] gi|254593044|gb|ACT72405.1| putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 str. TW14359] gi|320192550|gb|EFW67192.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC1212] gi|326342702|gb|EGD66473.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1125] gi|326347754|gb|EGD71470.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1044] Length = 501 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQNMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|284921116|emb|CBG34182.1| phage head-tail preconnector protein [contains: scaffold protein] [Escherichia coli 042] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|218557481|ref|YP_002390394.1| head-tail preconnector protein GP5 [Escherichia coli S88] gi|300825250|ref|ZP_07105336.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|218364250|emb|CAR01919.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli S88] gi|300522269|gb|EFK43338.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|15801571|ref|NP_287588.1| putative head-tail preconnector protein of prophage CP-933O [Escherichia coli O157:H7 EDL933] gi|12515088|gb|AAG56200.1|AE005349_4 putative head-tail preconnector protein of prophage CP-933O [Escherichia coli O157:H7 str. EDL933] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQNMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|303274683|ref|XP_003056657.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461009|gb|EEH58302.1| predicted protein [Micromonas pusilla CCMP1545] Length = 848 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 85/159 (53%), Gaps = 13/159 (8%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GY+++C ++ +VA+ +++GSIGV+ + P + L K G+ +++ + K Sbjct: 600 VEQVAASGGYMMACVADRLVASPFAVLGSIGVISEVPNLYERLKKEGIEFQTITAGKFKR 659 Query: 163 EPSPFSEVN----PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 +P ++ K+ + ++DV+ + + FV+ S+ + D ++ G W G +A Sbjct: 660 TLTPTKKIEKADVEKSTRDIEDVL-TLFKGFVK--SQRPGLDIDD---VATGETWFGEDA 713 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 GL D + ++V L + G + I +K + PP+ Sbjct: 714 MNKGLCDALQTTDDVLLQLLSDG--KEIFSVK-YAPPRT 749 >gi|10957305|ref|NP_058329.1| hypothetical protein R27_p116 [Salmonella typhi] gi|18466650|ref|NP_569458.1| putative peptidase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|7800358|gb|AAF69954.1|AF250878_115 orf; hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|16505966|emb|CAD09852.1| putative peptidase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|145849084|emb|CAM91648.1| putative transmembrane peptidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|313651407|gb|EFS15803.1| peptidase family S49 family protein [Shigella flexneri 2a str. 2457T] Length = 393 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 9/151 (5%) Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 AG F I ++N KP+I V + ASA Y ++ I A ++L GSIGV + Sbjct: 177 AGSGHF--ISDMENSYKPIIVSVKGICASACYYAVSPADAIYADSSALTGSIGVRMDHWN 234 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESR-- 197 + +D +GV + + + K P+ ++ MQ ++D+ + F+ V + R Sbjct: 235 LSRVMDTVGVKNEPLTAGEFKDALDPYHPLSDATRDFMQKQILDAMHEQFIADVEQGRGK 294 Query: 198 ---NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + P + L GR+WT +A + GLID Sbjct: 295 KLLSRPEADAVALYSGRVWTTQQAIRYGLID 325 >gi|332184305|gb|AEE26559.1| peptidase family S49 protein [Francisella cf. novicida 3523] Length = 338 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 24/200 (12%) Query: 41 IAIRGQIEDSQELIERIERISRDDSAT--------ALIVSLSSPGG--SAYAGEAIFRAI 90 I +G I SQ +E + + SA +IV + SPGG + Y F A Sbjct: 98 INFKGDIHASQ-----VENLRNEVSAILAVVNTEDEVIVRIDSPGGVVNGYG----FAAA 148 Query: 91 QKVKNRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 Q + R+ I + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K Sbjct: 149 QLERIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEK 208 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G++++ S K + + + ++S + F + + R P + Sbjct: 209 NGINVEMHTSGEYKRTLTTVGINTEEGRNKFKQDLESIHQLFKKHILVYR--PSLNINKV 266 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G +A ++GL+D + Sbjct: 267 ATGEYWFGKDALELGLVDKI 286 >gi|190570851|ref|YP_001975209.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357123|emb|CAQ54534.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 353 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 93/175 (53%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 73 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSA 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ + + TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 133 AYAIASSAEKVFVSRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPM 192 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ +Q VD Y FV+L++ +RN+ + + ++ ++ G +A ++GL D Sbjct: 193 TSESLESLQKEVDRLYEMFVQLIARNRNLSIE-AIKSTEAGLYFGEKAVEIGLAD 246 >gi|145516697|ref|XP_001444237.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411648|emb|CAK76840.1| unnamed protein product [Paramecium tetraurelia] Length = 241 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 AL V ++S GG GE + + I+ ++ P+ T + A SAGY + N I E Sbjct: 39 ALAVVVNSTGGLLVQGELMKKKIELFAKTHKIPLYTFAEDSALSAGYYLLSIGNKIFVDE 98 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S+VGSIGVL+ + KLG + S+ K + +N + + M+ +V Sbjct: 99 ASMVGSIGVLYLNLSIDKLTRKLGFEPRKFSSN--KKLFLNITGLNDERDEEMEGIVKDQ 156 Query: 186 Y----HWFVRLVSESR----NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + F + R D ++ + I+TG EA K GL D +G EEV L Sbjct: 157 FGIMRQQFFDHCDKYRPQLQKQDADVKDLIYNANIFTGIEAVKYGLADEIGNFEEVLNRL 216 Query: 238 Y 238 + Sbjct: 217 H 217 >gi|260844392|ref|YP_003222170.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|260844530|ref|YP_003222308.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257759539|dbj|BAI31036.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257759677|dbj|BAI31174.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|218688849|ref|YP_002397061.1| head-tail preconnector protein GP5 [Escherichia coli ED1a] gi|218426413|emb|CAR07239.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli ED1a] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPE 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|218689829|ref|YP_002398041.1| head-tail preconnector protein GP5 [Escherichia coli ED1a] gi|218427393|emb|CAR08290.2| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli ED1a] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPE 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|323180068|gb|EFZ65623.1| head-tail preconnector protein GP5 domain protein [Escherichia coli 1180] Length = 399 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 4 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 63 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 64 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 123 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 124 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 175 >gi|323186632|gb|EFZ71964.1| head-tail preconnector protein GP5 [Escherichia coli 1357] Length = 501 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ KPV ++ A SA Sbjct: 106 IVACLQQAMADTQVRGVLLDIDSPGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 K Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVMG-TEAAVFEGQSGIEAGLAD 277 >gi|224135353|ref|XP_002322052.1| predicted protein [Populus trichocarpa] gi|222869048|gb|EEF06179.1| predicted protein [Populus trichocarpa] Length = 212 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 7/120 (5%) Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP----MKAEPSPFSE 169 ++ A++ IVA +L GSIGV+ + +K+G + + + + A+ P Sbjct: 1 MAMAADTIVAENLTLTGSIGVVTGKFSLGKLYEKIGFNKEIISRGKYAELLAADQRP--- 57 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + P ++ ++Y F + SR++P DK ++ GR+WTG +A GL+D +GG Sbjct: 58 LRPDEAELFAKSAQNAYEQFRDKAAFSRSMPVDKMEEVAQGRVWTGQDAASRGLVDAIGG 117 >gi|146329631|ref|YP_001208985.1| putative periplasmic protease [Dichelobacter nodosus VCS1703A] gi|146233101|gb|ABQ14079.1| S49 family peptidase [Dichelobacter nodosus VCS1703A] Length = 333 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 8/200 (4%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISR-DDSATALIVSLSSPGGSAYA-GEAIFR 88 D P + I G +E S ++L ++I I + + +++ L S GG YA G A + Sbjct: 87 DERPRLFVIDFDGDVEASAVEDLRDQISAILQVAEEEDEVLLRLESAGGYVYAYGLAASQ 146 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++ ++ V ++AAS GY+++C ++ ++AA +LVGSIGV+ + P L K Sbjct: 147 LVRLRDKAVRLVIAVDKVAASGGYMMACVADELLAAPFALVGSIGVIGELPNFHDLLRKN 206 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL 207 + + + K + F + + + + ++ F + R N+ ++ + Sbjct: 207 DIHYEQHTAGQYKRTLTVFGQNTEDDRKQFRHELAETHALFKAHIQAMRPNLAVEE---V 263 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 + G W G++A GLID V Sbjct: 264 ATGETWYGSQALAKGLIDRV 283 >gi|262376071|ref|ZP_06069302.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] gi|262309165|gb|EEY90297.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] Length = 320 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAA 124 ++V L SPGG + G A A Q V+ R+ + V ++AAS GY+++C +N I++A Sbjct: 94 VVVRLESPGGMVHGYGLA---AAQLVRLREAGFHLTICVDKVAASGGYMMACIANEIISA 150 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGV+ Q P L + + + K + F E + ++ + Sbjct: 151 PFAIVGSIGVVAQVPNFNRLLKDNKIDFELYTAGQYKRTVTMFGENTEEGKAKFEEELQQ 210 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ F V + R P ++ G W G +A + L+D + +E +L Sbjct: 211 THALFKHFVEKYR--PQLNIEKVATGEHWYGRDALDLNLVDKLQTSDEYLLNL 261 >gi|193066616|ref|ZP_03047653.1| head-tail preconnector protein GP5 [Escherichia coli E22] gi|192925744|gb|EDV80401.1| head-tail preconnector protein GP5 [Escherichia coli E22] Length = 501 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|86139851|ref|ZP_01058417.1| Peptidase U7 [Roseobacter sp. MED193] gi|85823480|gb|EAQ43689.1| Peptidase U7 [Roseobacter sp. MED193] Length = 472 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 3/174 (1%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +IE +RD S A+ + + S GG + ++ ++ KPV + E A SAGY ++ Sbjct: 113 QIEAAARDASVRAVALEIDSFGGEVAGVFDLADQVRALRRDKPVWAFIAEHAFSAGYALA 172 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I+ T VGSIGV+ + + LD+ GV + + S K + +P+ + Sbjct: 173 SQADRILLPRTGTVGSIGVVVMHADLSGQLDQDGVRVTMIHSGQHKVDGNPYEPLPESVR 232 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +Q +D F V+ R+ + D L ++ + G++A GL D V Sbjct: 233 DDIQREIDVLRFLFAETVAAGRSGLLSQDAALA-TEATTYRGSDAVAAGLADEV 285 >gi|215485837|ref|YP_002328268.1| predicted head protein/prohead protease [Escherichia coli O127:H6 str. E2348/69] gi|215263909|emb|CAS08247.1| predicted head protein/prohead protease [Escherichia coli O127:H6 str. E2348/69] Length = 501 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|26247317|ref|NP_753357.1| putative capsid assembly protein of prophage [Escherichia coli CFT073] gi|26107718|gb|AAN79917.1|AE016759_191 Putative capsid assembly protein of prophage [Escherichia coli CFT073] Length = 501 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|260842992|ref|YP_003220770.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257758139|dbj|BAI29636.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] Length = 501 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|294636161|ref|ZP_06714581.1| head-tail preconnector protein GP5 [Edwardsiella tarda ATCC 23685] gi|291090527|gb|EFE23088.1| head-tail preconnector protein GP5 [Edwardsiella tarda ATCC 23685] Length = 498 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 3/174 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + R+++ D + +++ + SPGG A I ++ +KP+ ++MA SA Sbjct: 109 ITARLQQAISDTAVRGILLDIDSPGGQAAGAFDCADMIARLGAQKPIWALCNDMACSAAM 168 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 LI+ A + +TS +GSIGVL + + L + GV I + S K + + ++ P Sbjct: 169 LIASACAKRLVTQTSTIGSIGVLMAHTSYEKQLAQQGVDITLIYSGAHKVDGNS-TQALP 227 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +V+ Q +D++ F V+ + D + ++ ++G + VGL D Sbjct: 228 DSVRADFQQRIDAARRLFAEKVAMFTGLSVDDVMA-TEAATYSGQASIDVGLAD 280 >gi|291282672|ref|YP_003499490.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] gi|291283173|ref|YP_003499991.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] gi|290762545|gb|ADD56506.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] gi|290763046|gb|ADD57007.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] Length = 501 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGTHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|254671315|emb|CBA08708.1| serine protease [Neisseria meningitidis alpha153] Length = 204 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 8/110 (7%) Query: 34 NSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N+PH A + + G+I + E L + +E ++ A A+++ +SPGGS F Sbjct: 76 NTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFE 135 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 I+++K + P V +M AS Y I+ A++ I A +S+VGSIGV+ Sbjct: 136 EIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYADPSSIVGSIGVI 185 >gi|170080914|ref|YP_001730234.1| head protein [Escherichia coli str. K-12 substr. DH10B] gi|169888749|gb|ACB02456.1| head protein [Escherichia coli str. K-12 substr. DH10B] gi|312019774|emb|CBH95056.1| gpC [Enterobacteria phage phi80] Length = 447 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 9/191 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ D +++ + +PGG I ++++ KP+ ++M SAG Sbjct: 112 IIARLQQAISDPGVDGILLDMDTPGGMVSGAFDCADIIARMRDIKPIWALANDMNCSAGQ 171 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 LI+ +++ + +T+ GSIGV+ + L GV + + S K + +P+ ++ P Sbjct: 172 LIASSASRRLVTQTARTGSIGVMMAHSNYGAALKTNGVEVTLIYSGDRKVDGNPYEKL-P 230 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 K V+ Q +D++ F VS + L ++ +++G E+ GL D Sbjct: 231 KDVRADFQTRIDATRQMFAEKVSAYTGMSVQDVLD-TEAAVFSGQESLDNGLAD------ 283 Query: 232 EVWQSLYALGV 242 E+ + ALGV Sbjct: 284 ELVNNTDALGV 294 >gi|213019344|ref|ZP_03335151.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995453|gb|EEB56094.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 340 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 93/175 (53%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 60 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSA 119 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ + + TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 120 AYAIASSAEKVFVSRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPM 179 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ +Q VD Y FV+L++ +RN+ + + ++ ++ G +A ++GL D Sbjct: 180 TSESLESLQKEVDRLYEMFVQLIARNRNLSIE-AIKSTEAGLYFGEKAVEIGLAD 233 >gi|323174539|gb|EFZ60162.1| head-tail preconnector protein GP5 [Escherichia coli LT-68] Length = 402 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ KPV ++ A SA Sbjct: 7 IVACLQQAMADTQVRGVLLDIDSPGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 66 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 67 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 126 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 K Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 127 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVMG-TEAAVFEGQSGIEAGLAD 178 >gi|148652799|ref|YP_001279892.1| putative periplasmic protease [Psychrobacter sp. PRwf-1] gi|148571883|gb|ABQ93942.1| peptidase S49 [Psychrobacter sp. PRwf-1] Length = 332 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 3/167 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCAS 118 IS + +++ L S GG ++ + ++K+ +T V ++AAS GY+++C + Sbjct: 91 ISGANKGDEVVIRLESGGGMVHSYGLAAAQLVRLKDAGLTLTIAVDKIAASGGYMMACVA 150 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+AA +++GSIGV+ Q P +L K + + + K + F E + Sbjct: 151 DKILAAPFAVIGSIGVVSQMPNFNKWLKKHDIDYEMFTAGEYKRTVTVFGENDDDDRAKY 210 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ ++ F V+ R P +++G W G +A + L+D Sbjct: 211 TEELEQTHQLFKHFVTTYR--PQLDLTKVANGDHWYGEDALHLNLVD 255 >gi|323977132|gb|EGB72219.1| peptidase S49 [Escherichia coli TW10509] Length = 501 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|307321389|ref|ZP_07600787.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306892934|gb|EFN23722.1| peptidase S49 [Sinorhizobium meliloti AK83] Length = 301 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 2/181 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I RDD A++ + S GG I ++ KP I + + A SAGYL++ Sbjct: 115 IERDD-IKAVVFEVDSYGGEVTGAFDCAEQIFELSQVKPTIAVLTDHACSAGYLLASPCR 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +V +T + GSIGV+ + + +L K G+ + +K+ KA+ +P+ + +Q Sbjct: 174 QLVIPQTGICGSIGVISMHVDMSAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQEL 233 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ F V+ R ++ + ++ R++ G +A GL D V +V ++ Sbjct: 234 AELEELRVEFAATVARYRAGRLTQQSALATEARVYRGQKAVDAGLADAVARPSQVLEAFE 293 Query: 239 A 239 A Sbjct: 294 A 294 >gi|88811913|ref|ZP_01127166.1| Peptidase S49 [Nitrococcus mobilis Nb-231] gi|88790797|gb|EAR21911.1| Peptidase S49 [Nitrococcus mobilis Nb-231] Length = 329 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 5/166 (3%) Query: 69 LIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG + G A + I+ K + + +AAS GYL++ ++ +VAA + Sbjct: 127 VLLRLESAGGLVHNYGLAASQLIRLRKRGIHLTISIDRVAASGGYLMASVADCLVAAPFA 186 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ Q P L K V + + K + F E A ++ + + Sbjct: 187 IVGSIGVIAQVPNFHRVLKKHEVDFELHTAGEFKRTLTLFGENTDAARAKFREELAEIHQ 246 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 F ++ R N+ ++ ++ G W G A ++GL+D +G ++ Sbjct: 247 SFKEHIARYRPNVEINR---IATGEYWLGERACELGLVDELGTSDD 289 >gi|320659114|gb|EFX26713.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O55:H7 str. USDA 5905] Length = 501 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADIIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQGGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|46201147|ref|ZP_00055675.2| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 400 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 3/179 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAAS 109 ++ E IE + D + A+++ + SPGG + IQ ++++ KP+ E A S Sbjct: 81 DIGEDIEAAATDPNVRAILLDIDSPGGEVGGLFDLVDQIQVIRSQCGKPIWAVADEAALS 140 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A Y I C ++ +T VGS+GV+ + + G++ + + K + + Sbjct: 141 AAYAIGCVADRFYVTQTGEVGSVGVVAVHLDESGADSQAGLTWSFIHAGAAKVDGNSHQP 200 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ A +Q VD+ Y F+ LV++ R D + ++ ++ G +A +GL D VG Sbjct: 201 LSDTARATLQADVDALYTRFIDLVAKCRKKAPD-AIRATEANVYRGDQAVAMGLADKVG 258 >gi|291281130|ref|YP_003497948.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] gi|290761003|gb|ADD54964.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] Length = 501 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADIIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQGGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|323186751|gb|EFZ72073.1| head-tail preconnector protein GP5 [Escherichia coli RN587/1] Length = 501 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|307320186|ref|ZP_07599606.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306894232|gb|EFN24998.1| peptidase S49 [Sinorhizobium meliloti AK83] Length = 301 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 2/181 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I RDD A++ + S GG I ++ KP I + + A SAGYL++ Sbjct: 115 IDRDD-IKAVVFEVDSYGGEVTGAFDCAEQIFELSQVKPTIAVLTDHACSAGYLLASPCR 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +V +T + GSIGV+ + + +L K G+ + +K+ KA+ +P+ + +Q Sbjct: 174 QLVIPQTGICGSIGVISMHVDMSAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQEL 233 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ F V+ R ++ + ++ R++ G +A GL D V +V ++ Sbjct: 234 AELEELRVEFAATVARYRAGRLTQQSALATEARVYRGQKAVDAGLADAVARPSQVLEAFE 293 Query: 239 A 239 A Sbjct: 294 A 294 >gi|331671242|ref|ZP_08372061.1| minor capsid protein C (GPC) [Escherichia coli TA271] gi|331061535|gb|EGI33475.1| minor capsid protein C (GPC) [Escherichia coli TA271] Length = 294 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 +++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + L+K GV I Sbjct: 1 MRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEI 60 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S K + +P+S + + +Q +D++ F + VS + + ++ ++ + Sbjct: 61 TLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSV-QAVLDTEAAV 119 Query: 213 WTGAEAKKVGLID 225 ++G EA GL D Sbjct: 120 YSGQEAIDAGLAD 132 >gi|150396862|ref|YP_001327329.1| peptidase S49 [Sinorhizobium medicae WSM419] gi|150028377|gb|ABR60494.1| peptidase S49 [Sinorhizobium medicae WSM419] Length = 301 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 2/181 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I RDD A++ + S GG I ++ KP I + + A SAGYL++ Sbjct: 115 IERDD-IKAVVFEVDSYGGEVTGAFDCAELIFELSQVKPTIAVLTDHACSAGYLLASPCR 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +V +T + GSIGV+ + + +L K G+ + +K+ KA+ +P+ + +Q Sbjct: 174 QLVIPQTGICGSIGVISMHVDMSAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQEL 233 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ F V+ R ++ + ++ R++ G +A GL D V +V ++ Sbjct: 234 AELEELRVEFAATVARYRAGRLTQQSALATEARVYRGQKAVDAGLADAVARPSQVLEAFE 293 Query: 239 A 239 A Sbjct: 294 A 294 >gi|323454083|gb|EGB09953.1| hypothetical protein AURANDRAFT_12803 [Aureococcus anophagefferens] Length = 204 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 3/158 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L+S GG+ + +VK+ +T + ++AAS GY+++C + IVA+ + Sbjct: 42 VVLKLNSGGGTVTGYGLAAAQLMRVKDAGFKLTVCIEQVAASGGYMMACVGDRIVASPFA 101 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 ++GSIGV+ P V L K G+ ++V + K +P +V + + + + + Sbjct: 102 VLGSIGVISDIPNVYQRLKKEGIEFQTVTAGAYKRTLTPTKKVTKEDMDKSKQDIKEIFT 161 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F V+ R P ++ G W G +A K L D Sbjct: 162 LFKTFVAGQR--PALDIDAVATGETWFGEDALKRRLCD 197 >gi|288560933|ref|YP_003424419.1| peptidase S49 family [Methanobrevibacter ruminantium M1] gi|288543643|gb|ADC47527.1| peptidase S49 family [Methanobrevibacter ruminantium M1] Length = 285 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 10/168 (5%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + S GGS A + I I+K + KP+++ + + Y I+ A++ I A+ +S Sbjct: 81 GIVLDIDSGGGSLVASDEISDLIKK--SPKPIVSYIGDKGFDEAYQIASATDYIFASSSS 138 Query: 128 LVGSIGVLFQYPYVKPFLDK--LGV-SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +G + Y + D+ GV + K +K++ K+ S + Q M VD Sbjct: 139 SLGG--IGLSYINTDRYSDEKVTGVFNEKYLKNNKTKSNSKVKSANDLANAQKM---VDQ 193 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Y F++ ++E+RN+ D L+ G+ + G EAKK+GLID +G + + Sbjct: 194 DYTLFIKKIAENRNLTADYVAELAHGKKYNGNEAKKLGLIDEIGSKSQ 241 >gi|307308725|ref|ZP_07588421.1| peptidase S49 [Sinorhizobium meliloti BL225C] gi|306900731|gb|EFN31342.1| peptidase S49 [Sinorhizobium meliloti BL225C] Length = 301 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 2/181 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I RDD A++ + S GG I ++ KP I + + A SAGYL++ Sbjct: 115 IDRDD-IKAVVFEVDSYGGEVTGAFDCAEQIFELSQVKPTIAVLTDHACSAGYLLASPCR 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +V +T + GSIGV+ + + +L K G+ + +K+ KA+ +P+ + +Q Sbjct: 174 QLVIPQTGICGSIGVISMHVDMSAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQEL 233 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ F V+ R ++ + ++ R++ G +A GL D V +V ++ Sbjct: 234 AELEELRVEFAATVARYRAGRLTQQSALATEARVYRGQKAVDAGLADAVARPSQVLEAFG 293 Query: 239 A 239 A Sbjct: 294 A 294 >gi|117926027|ref|YP_866644.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609783|gb|ABK45238.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 410 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 2/186 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++ + D + A+++ + SPGG + IQ+ KP I + + A SA YLI Sbjct: 93 EKLLDAATDPAVRAILMDIDSPGGEVGGVFDLAAMIQEAGQGKP-IWALADDAFSAAYLI 151 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I+ +T+ VGSIGV+ + K G S +V + K + S + ++ A Sbjct: 152 ASQAHRIIVPQTAGVGSIGVIAAHVDESEKDAKEGRSYTTVFAGAHKNDFSSHAPLSDAA 211 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +Q VD Y F +V+ RNI + + ++ ++ G A K GL D VG + Sbjct: 212 RFNLQQEVDRLYGMFTGMVASGRNI-SETAVRATEAGLFFGDNAVKAGLADHVGTIRDAL 270 Query: 235 QSLYAL 240 L L Sbjct: 271 AGLTTL 276 >gi|188491998|ref|ZP_02999268.1| head-tail preconnector gp5 [Escherichia coli 53638] gi|188495988|ref|ZP_03003258.1| head-tail preconnector gp5 [Escherichia coli 53638] gi|188487197|gb|EDU62300.1| head-tail preconnector gp5 [Escherichia coli 53638] gi|188491187|gb|EDU66290.1| head-tail preconnector gp5 [Escherichia coli 53638] Length = 501 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYADHLAQAGVDITLIYAGSHKVDGNHFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMYTGLTVDAVMG-TEAAVFEGQTGIEAGLAD 277 >gi|254369756|ref|ZP_04985766.1| hypothetical protein FTAG_01090 [Francisella tularensis subsp. holarctica FSC022] gi|157122715|gb|EDO66844.1| hypothetical protein FTAG_01090 [Francisella tularensis subsp. holarctica FSC022] Length = 338 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 21/201 (10%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +S VE+ V+ I IED E+I RI DS ++ G +A + Sbjct: 106 ASQVENLRNEVSAILAVANIED--EIIVRI------DSLGGVV------NGYGFAAAQLE 151 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 R Q N I +V AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K Sbjct: 152 RIRQAGINLTVCIDKV---AASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEK 208 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLV 206 G++++ S K + + + ++S + F + + R ++ DK Sbjct: 209 NGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYRPSLDIDK--- 265 Query: 207 LSDGRIWTGAEAKKVGLIDVV 227 ++ G W G +A ++GL+D + Sbjct: 266 VATGEYWFGKDALELGLVDKI 286 >gi|326404357|ref|YP_004284439.1| putative peptidase S49 [Acidiphilium multivorum AIU301] gi|325051219|dbj|BAJ81557.1| putative peptidase S49 [Acidiphilium multivorum AIU301] Length = 265 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 2/162 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAET 126 LI+++ SPGGS + I R I++ V + + ++ AS GY I+CA + I A Sbjct: 51 LILAIESPGGSPVQSDLIGRHIRRKAEETGVRVLAVIGDVGASGGYWIACAGDEIFANPM 110 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+VGSIGV+ + + + G+ + V + K PFS P Q ++D + Sbjct: 111 SIVGSIGVVGGGFGLHDLIRRFGIERRVVTAGANKLRNDPFSPERPGDAAFNQALLDDIH 170 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F V E R + DG G+ AK GLID G Sbjct: 171 DAFKAWVRERRGAALKGDDTVFDGSYMLGSAAKARGLIDGFG 212 >gi|323953763|gb|EGB49573.1| peptidase S49 [Escherichia coli H263] Length = 264 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 66/137 (48%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWF 189 + Q MQ +D++ F Sbjct: 226 EVRQDMQQRIDAARRMF 242 >gi|281425071|ref|ZP_06255984.1| putative protease transmembrane protein [Prevotella oris F0302] gi|281400915|gb|EFB31746.1| putative protease transmembrane protein [Prevotella oris F0302] Length = 329 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 10/162 (6%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA-AETSL 128 + ++SPGG A+ + + ++ + KP++T +M SAGY I C I A + Sbjct: 140 FLHINSPGGEAWYLDRLSETLRSCE--KPILTFYEQMCCSAGYYIGCHGQRIYAMTQNDY 197 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQDVVDSSYH 187 VG IG + + +P+ KLG+ K++ + F ++ + K Q +++++D Sbjct: 198 VGCIGTMCSFYDFEPYFAKLGIKKVEAKATNSDLKNKVFDDLRHGKDAQFVKEILDPMNV 257 Query: 188 WFVRLVSESR----NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F+ V R ++P D VL G + +A ++GL D Sbjct: 258 QFLDEVRSQRSKLADLP-DDVPVLR-GETFYTPQAVEIGLAD 297 >gi|332186917|ref|ZP_08388658.1| peptidase S49 family protein [Sphingomonas sp. S17] gi|332012927|gb|EGI54991.1| peptidase S49 family protein [Sphingomonas sp. S17] Length = 290 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 9/180 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPG----GSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + +R+ D A+++++ SPG G A AG+AI+ +V+ KPVI Sbjct: 82 IADRVREAGADAKVGAIVLAIRSPGGYVWGCAEAGDAIY----EVRQSKPVIAVADPYCF 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y ++ + + VGS+GV + V F DK+G+ + S K P++ Sbjct: 138 SAAYWLATQGSGFYCTTSGEVGSVGVRSGHTDVSGFEDKIGMKTTLIASHEDKIAGHPYA 197 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVV 227 ++ A +Q VD S F ++ R I + + G+ ++ +A G ID V Sbjct: 198 PLDDAARAEIQASVDESNAAFAAAIARGRGIKASEVAGIHGTGKTFSAKQALANGAIDGV 257 >gi|91214231|ref|NP_918994.2| prohead protease ClpP [Burkholderia phage BcepNazgul] gi|88604924|gb|AAQ63361.2| prohead protease ClpP [Burkholderia phage BcepNazgul] Length = 434 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 1/165 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DD +I+ ++S GG A + I ++ KP++ + SA Y I+ A+ +V Sbjct: 113 DDDVEGIILDVNSYGGEAAGCFELADDIYAARDEKPIMAVIDSNCYSAAYAIASAATKVV 172 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + + GSIGV+ + + LD +G+ I + + K + +P+ ++ + +Q V Sbjct: 173 STPSGGAGSIGVVAMHVDMSEMLDDMGIKITFIHAGDHKVDGNPYEALSKEVKASIQADV 232 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++SY FV LV+ +R + K + + + + +A +GLID V Sbjct: 233 NASYDEFVSLVARNRGMDSQK-VRDTQAQTYRADDALNLGLIDAV 276 >gi|320660346|gb|EFX27826.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O55:H7 str. USDA 5905] Length = 119 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG A I +++ +KPV ++ A SA L++ A + + +TS +GSI Sbjct: 1 MDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSI 60 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 GV+ + L + GV I + S K + + F + + Q MQ +D++ F R Sbjct: 61 GVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFDR 119 >gi|198283216|ref|YP_002219537.1| putative periplasmic protease [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666621|ref|YP_002425447.1| type IV pilin biogenesis peptidase, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247737|gb|ACH83330.1| Peptidase S49 domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518834|gb|ACK79420.1| type IV pilin biogenesis peptidase, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 334 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 2/131 (1%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V +AAS GY+++ ++ IVA+ +L+GSIGV+ Q P +L + + + K Sbjct: 164 VDAVAASGGYMMAVTADRIVASPFALIGSIGVVAQIPNFHRWLQDRNIDWEQFTAGKFKR 223 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + F E +++ ++ ++ F V + R P ++ G W G +A+++G Sbjct: 224 TVTLFGENTETGRAKLREELEETHAQFRDFVQQYR--PQLDLEQVATGEAWLGNKARQLG 281 Query: 223 LIDVVGGQEEV 233 L+D + +E+ Sbjct: 282 LVDDLATSDEI 292 >gi|330877855|gb|EGH12004.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. race 4] Length = 196 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 8/126 (6%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQKAFEDEKTRGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGV 134 VGSIGV Sbjct: 179 VGSIGV 184 >gi|117926174|ref|YP_866791.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609930|gb|ABK45385.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 392 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 8/202 (3%) Query: 45 GQIEDSQELI------ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 G IE + L+ E++ + D + A+++ + SPGG + I + KP Sbjct: 59 GAIEAASGLMSYASIEEKLLDAATDPAVRAILMDIDSPGGEVGGVFDLAAMISEAGQGKP 118 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 I + + A SA YLI+ ++ I+ +T+ VGSIGV+ + K G S +V + Sbjct: 119 -IWALADDAFSAAYLIASQAHRIIVPQTAGVGSIGVIAAHVDESEKDAKEGRSYTTVFAG 177 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K + S + ++ A +Q VD Y F +V+ R +P + + ++ ++ G A Sbjct: 178 ARKNDFSTHAPLSDAARSNLQQEVDRLYGMFTGMVASGRGMP-EAVVRATEAGLFFGDNA 236 Query: 219 KKVGLIDVVGGQEEVWQSLYAL 240 K GL D VG + L AL Sbjct: 237 VKAGLADQVGTIRDALAGLTAL 258 >gi|289673839|ref|ZP_06494729.1| putative periplasmic protease [Pseudomonas syringae pv. syringae FF5] Length = 131 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 52/100 (52%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K + + + + Sbjct: 21 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTA 80 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 K + F E K + Q +D ++ F V+ R Sbjct: 81 GEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR 120 >gi|84684063|ref|ZP_01011965.1| Peptidase U7 [Maritimibacter alkaliphilus HTCC2654] gi|84667816|gb|EAQ14284.1| Peptidase U7 [Rhodobacterales bacterium HTCC2654] Length = 855 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 14/207 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L +I + D++ A+ + + S GG A + I+ + +KPV + E A SA Sbjct: 110 EGLSAQIRAAAEDETVRAIAMEVDSFGGEAAGIFELMADIRAAREKKPVYAFLAEYALSA 169 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY ++ ++ + GSIGV+ + + L+ GV++ + S K + +P+ + Sbjct: 170 GYALASQADRVTIPPFGKAGSIGVVVIHADYQTQLENAGVNVTLIHSGKHKVDGNPYQHL 229 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +Q D+ + F V + R I + L G ++TG +A + GL D V Sbjct: 230 KGEVRDRIQQENDAMWLAFAEAVEQGRRGKITAQGAMKLEAG-VFTGLDALRYGLADEVI 288 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPP 255 +++L ++ NPP Sbjct: 289 EARAAFEAL-----------VEKLNPP 304 >gi|148260959|ref|YP_001235086.1| peptidase S49 [Acidiphilium cryptum JF-5] gi|146402640|gb|ABQ31167.1| peptidase S49 [Acidiphilium cryptum JF-5] Length = 265 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 2/162 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAET 126 LI+++ SPGGS + I R I++ V + + ++ AS GY I+CA + I A Sbjct: 51 LILAIESPGGSPVQSDLIGRHIRRKAEETGVRVLAVIGDVGASGGYWIACAGDEIFANPM 110 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+VGSIGV+ + + + G+ + V + K PFS P Q ++D + Sbjct: 111 SIVGSIGVVGGGFGLHDLIRRFGIERRIVTAGANKLRNDPFSPERPGDAAFNQALLDDIH 170 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 F V E R + DG G+ AK GLID G Sbjct: 171 DAFKAWVRERRGAALKGDDTVFDGSYMLGSAAKARGLIDGFG 212 >gi|76802382|ref|YP_327390.1| signal peptide peptidase [Natronomonas pharaonis DSM 2160] gi|76558247|emb|CAI49835.1| probable signal peptide peptidase [Natronomonas pharaonis DSM 2160] Length = 315 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 8/143 (5%) Query: 5 LKKIKTRY-----VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERI 57 L K+ R V+L++ + S V D+ V I ++G IE +Q++ +++ Sbjct: 6 LNKLSGRQQVALVVLLAIAAGVLAAPQVYSFVADDGDTVVVIEMQGPIETNMAQDVEDQL 65 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL-ISC 116 +DD+ A+++ + S GG E I+ A+ + PVI V M AS YL ++ Sbjct: 66 RDARQDDAVEAVVLEVESGGGLPAQSERIYAAVDRTSEEMPVIATVDTMGASGAYLSMAP 125 Query: 117 ASNIIVAAETSLVGSIGVLFQYP 139 A I VA VGS+GV P Sbjct: 126 ADEIYVAPSAQAVGSVGVAGTAP 148 >gi|9630469|ref|NP_046900.1| gp5 [Enterobacteria phage N15] gi|3192688|gb|AAC19041.1| gp5 [Enterobacteria phage N15] Length = 447 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 7/190 (3%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ D +++ + +PGG I ++++ KP+ ++M SAG Sbjct: 112 IIARLQQAISDPGVDGILLDMDTPGGMVSGAFDCADIIARMRDIKPIWALANDMNCSAGQ 171 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 LI+ +++ + +T+ GSIGV+ + L GV + + S K + +P+ ++ Sbjct: 172 LIASSASRRLVTQTARTGSIGVMMAHSNYGAALKTNGVEVSLIYSGDHKVDGNPYEKLPE 231 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q +D++ F VS + L ++ +++G E+ GL D E Sbjct: 232 DVRADFQTRIDATRQMFAEKVSAYTGMSVQDVLD-TEAAVFSGQESVDNGLAD------E 284 Query: 233 VWQSLYALGV 242 + + ALGV Sbjct: 285 LVNNTDALGV 294 >gi|323186697|gb|EFZ72020.1| head-tail preconnector protein GP5 [Escherichia coli RN587/1] Length = 501 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQVAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G + GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIEAGLAD 277 >gi|330946542|gb|EGH47564.1| peptidase S49, SppA [Pseudomonas syringae pv. pisi str. 1704B] Length = 195 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 8/126 (6%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIV 71 V + V + S H A I ++G I D ++ ++ +++ D+ +I+ Sbjct: 59 FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQKAFEDEKTKGVIL 118 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSL 128 ++SPGGS ++ I++++ KP V + ++ AS Y I+ A++ I A + SL Sbjct: 119 RINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIASAADQIYADKASL 178 Query: 129 VGSIGV 134 VGSIGV Sbjct: 179 VGSIGV 184 >gi|120602110|ref|YP_966510.1| peptidase S49 [Desulfovibrio vulgaris DP4] gi|120562339|gb|ABM28083.1| protein C, Serine peptidase, MEROPS family S49 [Desulfovibrio vulgaris DP4] Length = 408 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 2/173 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGE--AIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++ D + A+++++ SPGG+ A + A + KP+ + SA Y I Sbjct: 78 VQQALDDPAVRAVLLAIDSPGGTVDGTRELADWIAARVADGGKPIASYADGTMCSAAYWI 137 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 ++ + A +LVGS+GVL+ + +L+ G+ + + KA +P + ++ Sbjct: 138 GGSTGRVFAPAAALVGSVGVLWMHYDWSQYLETNGIRATYITAGSRKAAGAPEAPLSDND 197 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q ++D++Y F+ VS + +DG+++ EA +GL+ + Sbjct: 198 KAYFQHLIDTAYTQFLDGVSAPMGLDRANPAAWADGQVFRATEALALGLVTAI 250 >gi|83648314|ref|YP_436749.1| periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] gi|83636357|gb|ABC32324.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 407 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 1/165 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D +++ + SPGG A + I+ V RKPV ++ A SA Y I+ ++ + Sbjct: 95 DPQVAGILLDIDSPGGEAGGVFELAERIRAVNARKPVWAHANDSAFSAAYAIAASAGRLS 154 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 ++T+ VGS+GV+ + + G++ ++ + K + SP + ++P+A +Q V Sbjct: 155 VSQTAGVGSVGVIALHVDQSAKDARDGLAYTALYAGEHKNDLSPHAPLSPEAASSLQAEV 214 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 D Y FV V++ RN+ D + + R++ G EA +GL D V Sbjct: 215 DRLYRIFVSQVAQMRNLSEDD-VRNTKARLFFGEEAVSLGLADAV 258 >gi|300905036|ref|ZP_07122850.1| peptidase, S49 family protein [Escherichia coli MS 84-1] gi|300403058|gb|EFJ86596.1| peptidase, S49 family protein [Escherichia coli MS 84-1] Length = 113 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 57/105 (54%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + L+K G Sbjct: 3 IARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQG 62 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 V I + S K + +P+S + + +Q +D++ F + VS Sbjct: 63 VEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVS 107 >gi|220923762|ref|YP_002499064.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219948369|gb|ACL58761.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 300 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 9/182 (4%) Query: 50 SQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S ++ R +++RD + A+++ + SPGGS A+ + ++ RK V+ V AA Sbjct: 99 SAAMLARDLQLARDSAEVGAVMLLVDSPGGSPTGINALADQLYAMRGRKRVVAHVSGSAA 158 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYP-YVKPFLDKLG-VSIKSVKSSPMKAEPSP 166 SA Y I+ ++ +V +T ++GSIGV+ V+P D G +SI+ V S+ P P Sbjct: 159 SAAYWIASSAGELVTEKTGMLGSIGVVAAISKQVEP--DASGSLSIEIVSSNAPNKRPDP 216 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +E ++ + D +++ F+ V+ R P G + GA+A G+ D Sbjct: 217 QTEDGAAEIRALLDSIEAQ---FIADVARGRKTTPARVRTNFGAGGMKVGADAVAAGMAD 273 Query: 226 VV 227 V Sbjct: 274 RV 275 >gi|319405933|emb|CBI79564.1| putative capsid protein of prophage [Bartonella sp. AR 15-3] Length = 361 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 3/172 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ + S GG A + Q + + KP+ +E A SA Y I+C+++ I A Sbjct: 111 AVLLDIDSGGGEAGGVFDLVEEFQTLSKQYNKPIWAHANEFACSAAYAIACSASQIWVAR 170 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T +VGSIGV+ + +K G+ V K +P ++ A MQ Sbjct: 171 TGVVGSIGVVCAHLDQSRADEKHGLKWTFVFEGDHKVHGNPHEPLSDTAQIKMQADCALL 230 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Y FV V+++R + D + + + G +A K+GL D G + ++L Sbjct: 231 YEMFVDWVAQNRPLNAD-AIRDTKAETFIGTQALKLGLADAQGTLAQALEAL 281 >gi|325292902|ref|YP_004278766.1| peptidase S49 [Agrobacterium sp. H13-3] gi|325060755|gb|ADY64446.1| peptidase S49 [Agrobacterium sp. H13-3] Length = 372 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 2/169 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGG+ + + I+K++ KP+I +V+ +AASA Y I+ +++ IV + Sbjct: 105 AVVLDIDSPGGTVPGTDELATEIRKLRGGEKPIIAQVNSLAASAAYWIAASTDEIVVTPS 164 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 GSIGV + + L++ G+ + + K E + + + +QD V+ SY Sbjct: 165 GRAGSIGVYTAHDDLSAALEQRGIKRTYISAGKHKVEGNETEPLGKDTLAHVQDGVNRSY 224 Query: 187 HWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + FV V+E R + K GR++ G++D + +E Sbjct: 225 NRFVASVAEGRGVTVSKVEDNFGQGRVFYAEALMDRGMVDRIATLDETL 273 >gi|212710697|ref|ZP_03318825.1| hypothetical protein PROVALCAL_01764 [Providencia alcalifaciens DSM 30120] gi|212686394|gb|EEB45922.1| hypothetical protein PROVALCAL_01764 [Providencia alcalifaciens DSM 30120] Length = 168 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%) Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +++C +N IVAA S++GSIGV+ Q P + L K V ++ + K + E Sbjct: 1 MMACIANKIVAAPFSIIGSIGVVAQVPNIHRLLKKHDVDVELHTAGEYKRTLTMLGENTE 60 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + ++S++ F V ++R P ++ G W G +A + GL+D +G Sbjct: 61 QGRKKFVEDLNSTHELFKDFVHQNR--PSLDIAAVATGEYWYGTQALEKGLVDQIG 114 >gi|126459873|ref|YP_001056151.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] gi|126249594|gb|ABO08685.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] Length = 522 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 26/191 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q D+ L +R+ +S+ +++ ++SPGG+ EA++ ++ + KP V+ Sbjct: 45 QSPDAGALAQRLVELSQRGDVAGVVLVINSPGGTVSDTEALYATLRGLG--KPKYAVVYG 102 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLF-----QYPYVKPFLDKLGVSIKSVKSSPM 160 +AAS Y ++ A++ I A +S VGSIGV+ +Y Y P D + + P+ Sbjct: 103 LAASGAYYVAAAADKIYATPSSWVGSIGVIAVIWPDEYLYDAP--DYV------YTTGPL 154 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEA 218 K + + V+ + FV+ V+E R + + T L ++T ++A Sbjct: 155 KYYGMDLTS--------FYNAVEEVRNNFVKAVAEGRRGRLRVNAT-ELETAALYTASQA 205 Query: 219 KKVGLIDVVGG 229 ++GL+D +GG Sbjct: 206 LEMGLVDKIGG 216 >gi|294846003|gb|ADF43161.1| SPP1Cm [Chlamydomonas reinhardtii] Length = 631 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMA 107 D+ +L+ + + D+ A++V ++SPGGSA A ++I R +Q++K K V+ + ++A Sbjct: 442 DAAKLVADLRMMMDDNLVRAVVVRVNSPGGSALASDSIRRELQRLKTLGKTVVVSMGDVA 501 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGV 134 A Y I+ A+N +VA ++ G IG Sbjct: 502 AGGAYYIASAANAVVAQPGTVTGGIGA 528 >gi|262365465|gb|ACY62022.1| peptidase family U7 protein [Yersinia pestis D182038] Length = 168 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 2/121 (1%) Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +++C ++ I+ A +++GSIGV+ Q P L K + ++ + K + F E Sbjct: 1 MMACVADRIICAPFAIIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTE 60 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + ++ ++ ++ F + V + R P ++ G W G +AK+ GL+D +G ++ Sbjct: 61 QGREKFREDLNETHLLFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDD 118 Query: 233 V 233 + Sbjct: 119 L 119 >gi|325268614|ref|ZP_08135244.1| S49 family peptidase [Prevotella multiformis DSM 16608] gi|324989142|gb|EGC21095.1| S49 family peptidase [Prevotella multiformis DSM 16608] Length = 329 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 10/162 (6%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA-AETSL 128 + ++SPGG A+ + + ++ + KP++T +M SAGY I C I A + Sbjct: 140 FLHINSPGGEAWYLDRLSETLRSCE--KPILTFYEQMCCSAGYYIGCHGQRIYAMTQNDY 197 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQDVVDSSYH 187 VG IG + + +P+ KLG+ K++ + F ++ + K + +++++D Sbjct: 198 VGCIGTMCSFYDFEPYFAKLGIKKVEAKATNSDLKNKVFDDLRHGKDAKFVKEILDPMNV 257 Query: 188 WFVRLVSESR----NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F+ V R ++P D ++ G + +A ++GL D Sbjct: 258 QFLDEVRSQRSKLADLPDDAPVL--RGETFYTPQAVEIGLAD 297 >gi|197261841|ref|ZP_03161915.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197240096|gb|EDY22716.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 498 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 8/191 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + R+++ D +++ + SPGG A I +++ +KPV +E A SA Sbjct: 106 ITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + G+ I + S KA+ +P S+ P Sbjct: 166 LLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTP-SQKLP 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLID 225 ++V Q +D + F V+ + D + DG+ I TG V D Sbjct: 225 ESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAAD 284 Query: 226 VVGGQEEVWQS 236 +G E S Sbjct: 285 AIGVMAEAINS 295 >gi|267993060|gb|ACY87945.1| prophage head-tail preconnector [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|267994733|gb|ACY89618.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] Length = 498 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 8/191 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + R+++ D +++ + SPGG A I +++ +KPV +E A SA Sbjct: 106 ITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMICRMREQKPVWALANETACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + G+ I + S KA+ +P S+ P Sbjct: 166 LLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTP-SQKLP 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLID 225 ++V Q +D + F V+ + D + DG+ I TG V D Sbjct: 225 ESVHADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAAD 284 Query: 226 VVGGQEEVWQS 236 +G E S Sbjct: 285 AIGVMAEAINS 295 >gi|303251829|ref|ZP_07338000.1| truncated periplasmic protease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649259|gb|EFL79444.1| truncated periplasmic protease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 224 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 IS + +++ L SPGG + +Q+++ P+ V ++AAS GY+++C + Sbjct: 130 ISLANKEDEVLLRLESPGGVVHGYGLAASQLQRLRTHNIPLTVAVDKVAASGGYMMACVA 189 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFL 145 N IVAA +++GS+GV+ Q P + L Sbjct: 190 NKIVAAPFAIIGSVGVVAQVPNIHRLL 216 >gi|238785978|ref|ZP_04629941.1| Protein C serine peptidase MEROPS family S49 [Yersinia bercovieri ATCC 43970] gi|238713126|gb|EEQ05175.1| Protein C serine peptidase MEROPS family S49 [Yersinia bercovieri ATCC 43970] Length = 260 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 1/178 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DD+ + + SPGG + I + KP+ + + E A SA Y ++ A++ I+ Sbjct: 80 DDAVKGICFDIDSPGGEVAGCFDLVDEIYAARGAKPIWSILSENAYSAAYALASAADRII 139 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T VGSIGV+ + + GV + + KAE +P+ ++ +A + +Q V Sbjct: 140 VPRTGGVGSIGVIVMHVDWSQRIKSDGVQVTIITFGSRKAESNPYEALSEEAKKAIQSDV 199 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 D FV VS +R I ++T+ ++ + A+ ++GL D V + ++ L L Sbjct: 200 DEMGRLFVSTVSRNRGIA-ERTIRDTEAACFLAADGVQLGLADQVAPPDVAFRDLLTL 256 >gi|168264539|ref|ZP_02686512.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347014|gb|EDZ33645.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 498 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 8/188 (4%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 R+++ D +++ + SPGG A I +++ +KPV +E A SA L++ Sbjct: 109 RLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLA 168 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + + +TS +GSIGV+ + L + G+ I + S KA+ +P S+ P++V Sbjct: 169 AACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTP-SQKLPESV 227 Query: 176 QM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLIDVVG 228 Q +D + F V+ + D + DG+ I TG V D +G Sbjct: 228 HADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIG 287 Query: 229 GQEEVWQS 236 E S Sbjct: 288 VMAEAINS 295 >gi|219128394|ref|XP_002184399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404200|gb|EEC44148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 216 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 2/131 (1%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++AAS GYL+SC ++ IVA+ +++GSIGV+ P V L K G+ ++V + K Sbjct: 72 VEQVAASGGYLMSCVADRIVASPFAVLGSIGVISDIPNVYDRLKKEGIEFQTVTAGKYKR 131 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 +P + + + V+ F V ++R P ++ G W G +A Sbjct: 132 TLTPTKKATKEDFDKTKKDVEDILVLFKEFVHQNR--PQLDIDQVATGETWFGKDALDRK 189 Query: 223 LIDVVGGQEEV 233 L D + ++V Sbjct: 190 LCDEIKTVDDV 200 >gi|307546775|ref|YP_003899254.1| peptidase S49 [Halomonas elongata DSM 2581] gi|307218799|emb|CBV44069.1| peptidase S49 [Halomonas elongata DSM 2581] Length = 407 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 8/187 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L++ I+ D S +++++ SPGG A + I + +KP+ ASA Y Sbjct: 85 LVKDIQTALDDPSIQGIVLNIDSPGGEATGINELSDLIYNARGQKPIKAYAGGQMASALY 144 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG-VSIKSVKSSPMKAEPSPFSEVN 171 + A++ ++ +T+ +GS+GV+ ++ D+ G S + V S+ P P +E Sbjct: 145 WVGSAADEVIVDDTAQLGSVGVVLS---LRKREDRPGEKSYEIVSSNAPNKRPDPETEAG 201 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 +Q D + F+ V+ +R++P D+ G + TGA A + G+ D +G Sbjct: 202 RAQLQARTDEL---AAVFLDKVARNRDLPRDEVNDRFRQGGVATGALAVEAGMADRLGSL 258 Query: 231 EEVWQSL 237 E V L Sbjct: 259 ESVIAEL 265 >gi|258611700|ref|ZP_05711610.1| peptidase [Listeria monocytogenes FSL R2-503] gi|258605514|gb|EEW18122.1| peptidase [Listeria monocytogenes FSL R2-503] Length = 193 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 17/126 (13%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQ-YPY 140 Q Y Y Sbjct: 177 MQGYDY 182 >gi|312968745|ref|ZP_07782953.1| putative head-tail preconnector protein [Escherichia coli 2362-75] gi|312286598|gb|EFR14510.1| putative head-tail preconnector protein [Escherichia coli 2362-75] Length = 501 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 1/173 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSI V+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIDVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + Q MQ +D++ F V+ + D + ++ ++ G GL D Sbjct: 226 EVRQDMQQRIDAARRMFAEKVAMFTGLSVD-AVTGTEAAVFEGQSGIDAGLAD 277 >gi|110668686|ref|YP_658497.1| protease IV; endopeptidase IV; signal peptide peptidase [Haloquadratum walsbyi DSM 16790] gi|109626433|emb|CAJ52894.1| Protease IV; endopeptidase IV; probable signal peptide peptidase [Haloquadratum walsbyi DSM 16790] Length = 328 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 S S E VA I RG + E + + S A+++ + SPGG A Sbjct: 37 SGSGPDEGGESSVAVITFRGGTTSGNVAAVTESLREARTNGSVDAIVLRIDSPGGPVDAS 96 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 E + A+ + ++ PV+ V AAS GY + IV +S VGSIGV+ Q P Sbjct: 97 EEFYLAVNRTASQMPVVAYVEGTAASGGYFGIAPVDEIVVKPSSTVGSIGVIVQAP 152 >gi|300918442|ref|ZP_07135040.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300414417|gb|EFJ97727.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] Length = 445 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 93/191 (48%), Gaps = 9/191 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +I R+++ D +++ + +PGG I ++++ KP+ ++M SAG Sbjct: 112 IIARLQQAISDPGVDGILLDMDTPGGMVAGAFDCADIIARMRDIKPIWALANDMNCSAGQ 171 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 LI+ A++ + +T+ GSIGV+ + L GV + + S K + +P+ ++ P Sbjct: 172 LIASAASRRLVTQTARTGSIGVMMAHSNYGAALKTSGVEVTLIYSGDHKVDGNPYEKL-P 230 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 K V+ Q +D++ F V+ + + ++ ++ +++G E+ GL E Sbjct: 231 KEVRADFQARIDATRQMFAEKVAGYTGMSV-QAVLDTEAAVFSGQESVDNGL------AE 283 Query: 232 EVWQSLYALGV 242 ++ ++ AL V Sbjct: 284 QLVNNMDALNV 294 >gi|16765926|ref|NP_461541.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992742|ref|ZP_02573838.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168466629|ref|ZP_02700483.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168467948|ref|ZP_02701785.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168468075|ref|ZP_02701912.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822377|ref|ZP_02834377.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|169257232|ref|YP_001700609.1| bacteriophage prohead protease; Lambda gpC homolog [Phage Gifsy-1] gi|194445600|ref|YP_002041869.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|16421154|gb|AAL21500.1| Gifsy-1 prophage protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194404263|gb|ACF64485.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195628838|gb|EDX48256.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195628990|gb|EDX48386.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630840|gb|EDX49432.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205329131|gb|EDZ15895.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205341279|gb|EDZ28043.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261247803|emb|CBG25631.1| capsid assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|312913598|dbj|BAJ37572.1| Gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085509|emb|CBY95288.1| Head-tail preconnector protein GP5 Contains: Scaffold protein GP6; Head protein GP6 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222685|gb|EFX47756.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130940|gb|ADX18370.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989534|gb|AEF08517.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 498 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 6/187 (3%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 R+++ D +++ + SPGG A I +++ +KPV +E A SA L++ Sbjct: 109 RLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLA 168 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + + +TS +GSIGV+ + L + G+ I + S KA+ +P ++ Sbjct: 169 AACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVY 228 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLIDVVGG 229 Q +D + F V+ + D + DG+ I TG V D +G Sbjct: 229 ADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGV 288 Query: 230 QEEVWQS 236 E S Sbjct: 289 MAEAINS 295 >gi|301159156|emb|CBW18670.1| putative bacteriophage tail protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 482 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 6/187 (3%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 R+++ D +++ + SPGG A I +++ +KPV +E A SA L++ Sbjct: 93 RLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLA 152 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + + +TS +GSIGV+ + L + G+ I + S KA+ +P ++ Sbjct: 153 AACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVY 212 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLIDVVGG 229 Q +D + F V+ + D + DG+ I TG V D +G Sbjct: 213 ADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGV 272 Query: 230 QEEVWQS 236 E S Sbjct: 273 MAEAINS 279 >gi|254884972|ref|ZP_05257682.1| protease [Bacteroides sp. 4_3_47FAA] gi|254837765|gb|EET18074.1| protease [Bacteroides sp. 4_3_47FAA] Length = 286 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 10/197 (5%) Query: 35 SPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S VA I + G + ++ L E I + + +D +I+ ++ PGG + + I + Sbjct: 69 SDSVAVIVLEGTLYSWETFRLQEYIAQAAANDRIAGIILWINGPGGMITGLDNASKMISE 128 Query: 93 VKNRKPVITEVHEMAASAGY-LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 KPV+ + ASA + L S A + + VGSIGV+ Y K L K G+ Sbjct: 129 CP--KPVVAYIAGACASAHFWLASAADKRFLGSLMCEVGSIGVVGTYYNAKEALKKKGID 186 Query: 152 IKSV--KSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + S+ +K E +E N + + ++ + + F R VSE+ +I YDK + Sbjct: 187 YREIYPDSADLKNREHREIAENNNE--EPYKEKLSKLHMMFCRTVSENLSIAYDKDSPVF 244 Query: 209 DGRIWTGAEAKKVGLID 225 G + G EA + GL D Sbjct: 245 RGATFMGDEAVREGLAD 261 >gi|240849986|ref|YP_002971378.1| phage protein Gp18 [Bartonella grahamii as4aup] gi|240267109|gb|ACS50697.1| phage protein Gp18 [Bartonella grahamii as4aup] Length = 354 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 20/217 (9%) Query: 68 ALIVSLSSPGGSAYAGEAI---FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+++ + S GG A + F+A+ K K KP+ +E A SA Y I+C+++ I A Sbjct: 105 AVLLDIDSGGGEAGGVFDLVEEFQALSK-KYDKPIWAHANEFACSAAYAIACSASQIWVA 163 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 T +VGSIGV+ + +K G V K +P ++ A MQ Sbjct: 164 RTGVVGSIGVVCAHLDQSRADEKHGHKWTFVFEGDHKVHGNPHEPLSDTAQIKMQADCAL 223 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVGLIDVVGGQEEVWQSLYALGV 242 Y FV LV+++R + + D + T G +A +GL D G + Q+L AL Sbjct: 224 LYEMFVDLVAQNRRL---NAAAIRDTKAETFIGNQAITLGLADAQG---TLAQALEALTD 277 Query: 243 DQSIRKIKDWNPPKNYWFCD--------LKNLSISSL 271 S +N W +K LS SS+ Sbjct: 278 SISQNPTSTEKEGQNTWHAHNTALKKMMMKRLSTSSM 314 >gi|323953809|gb|EGB49615.1| peptidase S49 [Escherichia coli H263] Length = 241 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 65/133 (48%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPA 225 Query: 173 KAVQMMQDVVDSS 185 + Q MQ +D++ Sbjct: 226 EVRQDMQQRIDAA 238 >gi|149191855|ref|ZP_01870090.1| predicted inner membrane peptidase [Vibrio shilonii AK1] gi|148834290|gb|EDL51292.1| predicted inner membrane peptidase [Vibrio shilonii AK1] Length = 238 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 10/133 (7%) Query: 36 PHVARIAIRGQIEDSQELIERIERIS------RDDSATALIVSLSSPGGSAYAGEAIFRA 89 PH+ + G I D++E+ E +S RD ++V L S GG +A Sbjct: 105 PHLFVLDFNGSI-DAKEVASLREEVSAILAVARD--GDEVLVRLESGGGMVHAYGLASSQ 161 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 162 LDRIKAAKLPLTIAVDKVAASGGYMMACIADKIVSAPFAVVGSIGVIAQLPNFNKLLKKN 221 Query: 149 GVSIKSVKSSPMK 161 + + + + K Sbjct: 222 DIEFEQLTAGEYK 234 >gi|62179788|ref|YP_216205.1| Gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127421|gb|AAX65124.1| Gifsy-1 prophage head-tail preconnector gp5 [Phage Gifsy-1] gi|322714256|gb|EFZ05827.1| Gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 498 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 6/187 (3%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 R+++ D +++ + SPGG A I +++ +KPV +E A SA L++ Sbjct: 109 RLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLA 168 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + + +TS +GSIGV+ + L + G+ I + S KA+ +P ++ Sbjct: 169 AACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVY 228 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLIDVVGG 229 Q +D + F V+ + D + DG+ I TG V D +G Sbjct: 229 ADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGV 288 Query: 230 QEEVWQS 236 E S Sbjct: 289 MAEAINS 295 >gi|200390897|ref|ZP_03217508.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603342|gb|EDZ01888.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 498 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 8/191 (4%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + R+++ D +++ + SPGG A I +++ +KPV +E A SA Sbjct: 106 ITARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + G+ I + S KA+ +P S+ P Sbjct: 166 LLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTP-SQKLP 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR--IWTGAEAKKVGLID 225 ++V Q +D + F V+ + D + DG+ I TG V D Sbjct: 225 ESVHADYQQRMDEARKMFAVKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAAD 284 Query: 226 VVGGQEEVWQS 236 +G E S Sbjct: 285 AIGVMAEAINS 295 >gi|46580575|ref|YP_011383.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] gi|46449994|gb|AAS96643.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] Length = 406 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 81/173 (46%), Gaps = 2/173 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFR--AIQKVKNRKPVITEVHEMAASAGYLI 114 +++ D + A+++++ SPGG+ + A + KP+ + SA Y I Sbjct: 78 VQQALDDPAVRAVLLAIDSPGGTVDGTRELADWIAARVADGVKPIASYADGTMCSAAYWI 137 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 ++ + A ++VGS+GVL+ + +L+ G+ + + KA +P + ++ Sbjct: 138 GGSTGRVFAPAAAIVGSVGVLWMHYDWSQYLETNGIRATYITAGSRKAAGAPEAPLSDND 197 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q ++D++Y F+ VS + +DG+++ EA +GL+ + Sbjct: 198 KAYFQHLIDTAYTQFLDGVSAPMGLDRANPAAWADGQVFRATEALALGLVTAI 250 >gi|306820326|ref|ZP_07453965.1| signal peptide peptidase SppA [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551655|gb|EFM39607.1| signal peptide peptidase SppA [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 294 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 26/210 (12%) Query: 33 DNSPHVARIAIRGQIED--SQELIER-IERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 D+ +A + + G ++ Q+ I + + I +I+ + SP G Y I Sbjct: 64 DSDSKIATVTLDGTLDSFVKQDYITKSLNNIMNTPEVKGVIIRIDSPKGGIYDSVEISEM 123 Query: 90 IQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ K K PV + ++ GY ++ + + + A E +++ Y K F +K Sbjct: 124 IKAFKTDKKVPVYAVIGSATSAGGYCVAISCDKVYAKENTIIN---------YTKLF-EK 173 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + S + +N ++ +++++Y FV V ES+ I + L Sbjct: 174 NETELGSTDRA-----------LNVDGRSSLRSILENAYEKFVSTVMESKGIDEARVRTL 222 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +DGRI+ G +A + L+D VGG + ++ Sbjct: 223 TDGRIYNGTQAHENQLVDEVGGFNDAVNAM 252 >gi|83645660|ref|YP_434095.1| periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] gi|83633703|gb|ABC29670.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 427 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 2/182 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 LI RI D +++ + SPGG I +KP+ + ++MA SA + Sbjct: 106 LIARINDAVGDPEVRGILLDMDSPGGEVAGCFDTTAMIAAYAKQKPIWSLTYDMACSACF 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ + ++ + GS+GV+ + + L +G + + S KAE +P+ ++ Sbjct: 166 AIASATSRRLITQSGVAGSVGVIMAHVSRQEELAAMGRKVTLIYSGKYKAEGNPYEDLPE 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI-DVVGGQE 231 + + Q + + F +V+ + + + ++ ++ +++ G A VG ++V G E Sbjct: 226 ETLSRFQAEMHTLREQFAGIVATNTGLSIE-AVMSTEAQVYRGQAAIDVGFAHEIVNGHE 284 Query: 232 EV 233 V Sbjct: 285 AV 286 >gi|332760042|gb|EGJ90342.1| head-tail preconnector protein GP5 [Shigella flexneri 4343-70] Length = 501 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 70/153 (45%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ KPV ++ A SA Sbjct: 106 IVACLQQAMADTQVRGVLLDIDSPGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K Q MQ +D++ F V+ + D + Sbjct: 226 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVM 258 >gi|299142750|ref|ZP_07035879.1| phage protein gp18 [Prevotella oris C735] gi|298575779|gb|EFI47656.1| phage protein gp18 [Prevotella oris C735] Length = 329 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 14/164 (8%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA-AETSL 128 + ++SPGG A+ + + ++ + KP++T +M SAGY I C N I A E Sbjct: 140 FLHINSPGGEAWYLDRLSETLRNCQ--KPILTFYEQMCCSAGYYIGCHGNRIYALTENDY 197 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV---NPKAVQMMQDVVDSS 185 VG IG + + + + KLG+ K++ + F ++ N +A +Q++++ Sbjct: 198 VGCIGTMCSFYDFEDYFAKLGIKKVEAKATNSDLKNKTFDDLRHGNDEA--FVQNILNPL 255 Query: 186 YHWFVRLVSESR----NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F+ V R +P D ++ G + +A ++GL D Sbjct: 256 NAQFLAEVRGQRKLLAELPEDAPVL--RGETFYTPQAVEIGLTD 297 >gi|110806591|ref|YP_690111.1| head-tail preconnector gp5 [Shigella flexneri 5 str. 8401] gi|110616139|gb|ABF04806.1| head-tail preconnector gp5 [Shigella flexneri 5 str. 8401] gi|333007221|gb|EGK26708.1| head-tail preconnector protein GP5 [Shigella flexneri K-218] Length = 501 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 70/153 (45%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ KPV ++ A SA Sbjct: 106 IVACLQQAMADTQVRGVLLDIDSPGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K Q MQ +D++ F V+ + D + Sbjct: 226 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVM 258 >gi|117926098|ref|YP_866715.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609854|gb|ABK45309.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 433 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 2/174 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++ + D + A+++ + SPGG + IQ+ KP I + + A SA YLI Sbjct: 91 EKLLDAATDPAVRAILMDIDSPGGEVGGVFDLAAMIQEAGQGKP-IWALADDAFSAAYLI 149 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I+ +T+ VGSIGV+ + K G S +V + K + S + ++ A Sbjct: 150 ASQAHRIIVPQTAGVGSIGVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSSHAPLSDAA 209 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q VD Y F +V+ R +P + + ++ ++ G+ A GL D VG Sbjct: 210 RFNLQQEVDRLYGMFTGMVASGRGMP-EAAVRATEAGLFFGSNAVSSGLADQVG 262 >gi|312964065|ref|ZP_07778509.1| peptidase family S49 family protein [Escherichia coli 2362-75] gi|312291106|gb|EFR18968.1| peptidase family S49 family protein [Escherichia coli 2362-75] Length = 127 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 2/121 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL + I+ + Sbjct: 8 PLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTA 67 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + E + + ++ ++ ++ F V R P ++ G W G + Sbjct: 68 GQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIEQVATGEHWYGQQ 125 Query: 218 A 218 A Sbjct: 126 A 126 >gi|311234315|gb|ADP87169.1| peptidase S49 [Desulfovibrio vulgaris RCH1] Length = 425 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 81/173 (46%), Gaps = 2/173 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFR--AIQKVKNRKPVITEVHEMAASAGYLI 114 +++ D + A+++++ SPGG+ + A + KP+ + SA Y I Sbjct: 97 VQQALDDPAVRAVLLAIDSPGGTVDGTRELADWIAARVADGVKPIASYADGTMCSAAYWI 156 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 ++ + A ++VGS+GVL+ + +L+ G+ + + KA +P + ++ Sbjct: 157 GGSTGRVFAPAAAIVGSVGVLWMHYDWSQYLETNGIRATYITAGSRKAAGAPEAPLSDND 216 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q ++D++Y F+ VS + +DG+++ EA +GL+ + Sbjct: 217 KAYFQHLIDTAYTQFLDGVSAPMGLDRANPAAWADGQVFRATEALALGLVTAI 269 >gi|121996911|ref|YP_001001698.1| putative periplasmic protease [Halorhodospira halophila SL1] gi|121588316|gb|ABM60896.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Halorhodospira halophila SL1] Length = 335 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 11/164 (6%) Query: 69 LIVSLSSPGGS--AYAGEAIFRAIQKVKNRKPVI---TEVHEMAASAGYLISCASNIIVA 123 +I+ L SPGG AY A Q + R+ I V +AAS GYL++ + IVA Sbjct: 125 VILRLESPGGGVPAYG----LAASQLARLREAGIHLTVCVDRVAASGGYLMAVVGDRIVA 180 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A +L+GSIGV+ P +L + + + P K + F E + ++ + Sbjct: 181 APFALIGSIGVVGSLPNFHRWLRNRDIDFEQHTAGPYKRTLTVFGENTEADRERFREDLG 240 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + F + R P ++ G W A + GLID + Sbjct: 241 HIHEQFKGFLRRYR--PQLDVETVATGEFWLAERALEAGLIDAL 282 >gi|117924561|ref|YP_865178.1| serine peptidase [Magnetococcus sp. MC-1] gi|117608317|gb|ABK43772.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 418 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 2/174 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E+I + D + A+++ + SPGG + IQ+ KP I + + A SA YLI Sbjct: 75 EKILDAATDPAVRAILMDVDSPGGEVGGVFDLAAMIQEAGQDKP-IWALADDAFSAAYLI 133 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I+ +T+ VGSIGV+ + K G S +V + K + S + ++ +A Sbjct: 134 ASQAHRIIVPQTAGVGSIGVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEA 193 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q VD Y FV V+ R + + + ++ ++ G +A +VGL D VG Sbjct: 194 RTNLQLEVDRLYGMFVAAVAAGRKM-NESAVRATEAGLFFGDKAIRVGLADQVG 246 >gi|307565406|ref|ZP_07627895.1| peptidase, S49 (protease IV) family protein [Prevotella amnii CRIS 21A-A] gi|307345856|gb|EFN91204.1| peptidase, S49 (protease IV) family protein [Prevotella amnii CRIS 21A-A] Length = 274 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 10/162 (6%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA-AETSL 128 + ++SPGG A+ + + ++ K KP++T +M SAGY I C N I A E Sbjct: 85 FLHINSPGGEAWYLDRLSETLRNCK--KPILTFYEKMCCSAGYYIGCHGNRIYALTENDY 142 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQDVVDSSYH 187 G IG + + + + KLG+ K++ + F ++ + K +Q++++ Sbjct: 143 AGCIGTMCSFYDFEDYFAKLGIKKVEAKATNSDLKNKTFDDLRHGKDEAFVQNILNPLNA 202 Query: 188 WFVRLVSESR----NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F+ V R +P D ++ G + +A ++GL D Sbjct: 203 QFLAEVRGQRKSLAELPDDAPVLR--GETFYTPKAVEIGLAD 242 >gi|118355546|ref|XP_001011032.1| probable peptidase, putative [Tetrahymena thermophila] gi|89292799|gb|EAR90787.1| probable peptidase, putative [Tetrahymena thermophila SB210] Length = 265 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 8/191 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMA 107 +Q++ I +I D A A+ + ++SPGGS + I ++ K+ P+ T +++A Sbjct: 30 TQDVRNSIAKIDAD-RAKAVALLINSPGGSPVQCDIITEMVKGFSKKHHLPLYTFANDIA 88 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD--KLGVSIKSVKSSPMKAEPS 165 AS G + + A ETSLVGS+GV+ + + KL I S A + Sbjct: 89 ASGGQFLLSIGDKSFAQETSLVGSVGVVGMWFGLGNLAKEYKLKPEIFSSNQEQELAYMN 148 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI---PYDKTLVLSDGRIWTGAEAKKVG 222 F ++ P+ + + + + + F+ + + N P ++ + D I G +A K G Sbjct: 149 FFEDLTPEKKEKIIRTLKTHHKIFIEHIEKHSNYKISPEEREKKIYDASIVLGKDAVKYG 208 Query: 223 LIDVVGGQEEV 233 L+D +G + V Sbjct: 209 LVDEIGQYQSV 219 >gi|332534170|ref|ZP_08410018.1| putative capsid assembly protein/protease [Pseudoalteromonas haloplanktis ANT/505] gi|332036459|gb|EGI72928.1| putative capsid assembly protein/protease [Pseudoalteromonas haloplanktis ANT/505] Length = 315 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 10/190 (5%) Query: 44 RGQIEDSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RG I DS E L ++++ DDS +++ ++S GG+A A I + ++ Sbjct: 86 RGSITDSCEEVMSYEFLRTQMQKALNDDSVLEIVLDINSGGGTAQAAFECAEFIYQARSI 145 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSV 155 KP+ ++ A S YLI+ A I+ ++T+ VGS+GV + K + D G + + Sbjct: 146 KPIRAIINFNAYSGAYLIAAACTEIIISDTAGVGSVGVYQKRLDMTKAYADA-GYKMHTF 204 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K P E++ + + ++ +Y FV + + R++ ++ L ++ + G Sbjct: 205 HRGATKVYFHPDVEMSEEERAHTEKNIEKTYQKFVGAIVKYRDMSLEQVLA-TEADTYEG 263 Query: 216 AEAKKVGLID 225 A + L D Sbjct: 264 QAAIDLKLAD 273 >gi|209918850|ref|YP_002292934.1| putative phage capsid assembly protein [Escherichia coli SE11] gi|209912109|dbj|BAG77183.1| putative phage capsid assembly protein [Escherichia coli SE11] Length = 499 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D S +++ + SPGG A I +++ +KPV +EMA SA L++ A + Sbjct: 116 DPSVRGVLLDIDSPGGQAAGAFDCADMIYRLREKKPVWALCNEMACSAAMLLAAACTRRL 175 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +T+ +GSIGV+ + + L + GV I + S K + + + Q + Sbjct: 176 VTQTAKIGSIGVMMAHTSYEKQLAQEGVDITLIYSGKHKVDGNCIQALPAGVCADFQRRI 235 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 D + FV V+ + + + ++ ++ G +GL D Sbjct: 236 DEARQMFVDKVALYTGMSSEAVMS-TEAAVYDGQAGIDIGLAD 277 >gi|144897349|emb|CAM74213.1| Periplasmic serine proteases (ClpP class) [Magnetospirillum gryphiswaldense MSR-1] Length = 173 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%) Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 F KLGVS VK S + +P+A + + +D+ Y F ++ RN+ D+ Sbjct: 6 FWPKLGVSWDGVKRGDNADMMSANHKFSPQAWERLNRSLDAIYADFTGKAAKGRNLAPDR 65 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGG 229 L+ GRIW G++A+ GL+D +GG Sbjct: 66 MEELAKGRIWAGSDAQARGLVDALGG 91 >gi|212224206|ref|YP_002307442.1| nodulation protein nfeD [Thermococcus onnurineus NA1] gi|212009163|gb|ACJ16545.1| nodulation protein nfeD [Thermococcus onnurineus NA1] Length = 441 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 12/129 (9%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI--AIRGQIEDSQELIERIERISRDDS 65 +K + V++ L+ L V +F S+H + N+ +VA+I I G D +R + + Sbjct: 1 MKLKIVLIVLI-LFVTFFP-SAHAQGNTVYVAKIDGMITGYTVDQ---FDRYISEAEKAN 55 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASAGYLISCASNIIV 122 A+A+I+ L++PGG A A + I IQ K PVI V+ MAASAG I+ S++I Sbjct: 56 ASAIIIELNTPGGRADAMQEIVMRIQNAK--VPVIIYVYPSGGMAASAGTYIALGSHLIA 113 Query: 123 AAETSLVGS 131 A +++G+ Sbjct: 114 MAPGTVIGA 122 >gi|46804778|dbj|BAD16787.1| similar to minor capsid protein GPC of phage lambda [Wolbachia phage WOcauB1] Length = 350 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 68 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRGKKRIIAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ ++ V+ Y V L++ +RN+ + + ++ ++ G +A ++GL D Sbjct: 188 TSESLENLKSEVNRLYEMLVELIARNRNLSVE-AIKSTEAGLYFGEKAVEIGLAD 241 >gi|260576715|ref|ZP_05844701.1| peptidase S49 [Rhodobacter sp. SW2] gi|259021082|gb|EEW24392.1| peptidase S49 [Rhodobacter sp. SW2] Length = 458 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 1/140 (0%) Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 AI+ + KPV V E A SAGY ++ + I+ T VGSIGV+ + + L Sbjct: 149 AIRAARTAKPVQAFVAEHAFSAGYALASQATSIILPRTGAVGSIGVVVMHADLSGQLADD 208 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVL 207 GV++ + S K + +P++ + +Q +DS F + VS R + + Sbjct: 209 GVTVTLIHSGAHKVDGNPYAPLPDPVRARIQGEIDSLRTLFAQTVSAGRGRRLTAEAALA 268 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 ++ + GAEA GL D V Sbjct: 269 TEAECYRGAEAVAAGLADEV 288 >gi|323179369|gb|EFZ64937.1| head-tail preconnector protein GP5 domain protein [Escherichia coli 1180] Length = 360 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 1/136 (0%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + L + G Sbjct: 2 IYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAG 61 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V I + + K + + F + + Q MQ VD+++ F V+ + + + ++ Sbjct: 62 VDITLIYAGAHKVDGNQFEALPAEVRQDMQQRVDAAHRMFAEKVAMYTGLSVE-AVTGTE 120 Query: 210 GRIWTGAEAKKVGLID 225 ++ G A K GL D Sbjct: 121 AAVFEGQSAIKAGLAD 136 >gi|325142766|gb|EGC65139.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis 961-5945] Length = 224 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +++++ R P+I V ++AAS GY+++C ++ IV+A + Sbjct: 139 VLLRLESPGGVVHGYGLAASQLRRLRERNIPLIVAVDKVAASGGYMMACVADKIVSAPFA 198 Query: 128 LVGSIGVLFQYPYVKPFLDKL 148 +VGS+GV+ + P + L + Sbjct: 199 IVGSVGVVAEVPNIHRLLKNM 219 >gi|256841934|ref|ZP_05547439.1| signal peptide peptidase SppA, 36K type [Parabacteroides sp. D13] gi|256736250|gb|EEU49579.1| signal peptide peptidase SppA, 36K type [Parabacteroides sp. D13] Length = 294 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 4/179 (2%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI-S 115 + R +++ A+++++ S GG + AI KPV+ ++ ASA Y I S Sbjct: 112 LNRCYNENNIKAIVLNIDSGGGEGMGCRIMQEAINS--RNKPVVAFCNDFVASAAYGIAS 169 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 C I+ + +GS+G + K+G+ + + +S + F + Sbjct: 170 CCDKIVANSNVCRIGSVGTYMTIVDTSEYYAKMGIKLIDIYASKSTDKNQEFHKALQGDT 229 Query: 176 QMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + ++ V D+ F+ ++ +R + + + G+++ EA +G+ID + E V Sbjct: 230 EPLKKVCDTYNENFISSIANARVGVINEDQGKWATGKMFFAPEAMDIGMIDEIDTFENV 288 >gi|331673505|ref|ZP_08374273.1| head-tail preconnector protein GP5 [Escherichia coli TA280] gi|331069703|gb|EGI41090.1| head-tail preconnector protein GP5 [Escherichia coli TA280] Length = 492 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 3/174 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L R++ D +++ + SPGG A I +++ +KPV ++MA SA Sbjct: 106 LTARLQMAVNDPDVRGILLDIDSPGGQAAGAFDCADMIYRLREQKPVWALCNDMACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + +T+ +GSIGV+ + + L + GV I + S K + + + P Sbjct: 166 LLAAACTHRLVTQTAKIGSIGVMMAHTSYEKQLAQEGVDITLIYSGQHKVDGNSIQAL-P 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 V+ Q +D + FV V+ + + + ++ ++ G GL D Sbjct: 225 AGVRADFQRRIDEARRMFVDKVARYTGLSSEAVMN-TEAAVYDGQAGIDAGLAD 277 >gi|117925336|ref|YP_865953.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609092|gb|ABK44547.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 433 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++ + D + A+++ + SPGG + I + KP I + + A SA YLI Sbjct: 91 EKLLDAATDPAVRAILMDIDSPGGEVGGVFDLAAMIHEAGQGKP-IWALADDAFSAAYLI 149 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I+ +T+ VGSIGV+ + K G S +V + K + S + ++ +A Sbjct: 150 ASQAHRIIVPQTAGVGSIGVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEA 209 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q VD Y FV V+ R + ++ + ++ ++ G +A +VGL D VG Sbjct: 210 RTNLQLEVDRLYGMFVAAVAAGRKM-HESAVRATEAGLFFGDKAIRVGLADQVG 262 >gi|189022207|ref|YP_001931940.1| peptidase S49 [Vibrio nigripulchritudo] gi|160334219|gb|ABX24532.1| putative peptidase S49 [Vibrio nigripulchritudo] Length = 434 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + S A+I+++ SPGG A + I + +KPV V SA Y I+ A + + Sbjct: 96 ESSVKAVILNVDSPGGEASGIHELSEMIHASRGKKPVRAYVGGDGCSAAYWIATACDRVT 155 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ---MMQ 179 T+ VGSIG + + +P + K + SP ++P++ Q +Q Sbjct: 156 MDATARVGSIGTVVSF-VKRP-------DAEGSKRFEFVSSQSPNKRLDPESEQGQTAIQ 207 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +D+ F+ V+ + + DK V SD G + G +A G+ +G E + S Sbjct: 208 TQLDAMADVFISRVARNMGVTSDK--VKSDFGQGGVKIGQQAVDAGMAHELGSLEALIAS 265 Query: 237 LYALGVDQSIRKIKD----WNPPKNYWFCDLKNLSISSLLEDTIP 277 L + G +QS ++ NP ++W L+DT P Sbjct: 266 L-SNGKNQSTTASRNTKTQHNPNASHWLA----------LDDTSP 299 >gi|269975292|gb|ACZ55516.1| prohead protease ClpP [Staphylococcus phage SA1] Length = 438 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 1/160 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+I ++S GG A + + + + KP + V SA Y ++ A++ IV + Sbjct: 120 AIIYDVNSNGGEAAGCFELSQEMFDTRGEKPSLAVVDSNCYSAAYALASAADKIVVTPSG 179 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 GSIGV+ + + L +G+++ +KS KA+ +P+ ++ + Q VDS Sbjct: 180 GAGSIGVIALHIDMSKMLADIGITVNIIKSGEHKADGNPYEPMSDEVRADWQASVDSMRT 239 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 FV LV+++R++ K + ++ + EA +GLID V Sbjct: 240 DFVNLVAQNRDLDP-KVVRDTEAMCYNAGEAMSIGLIDAV 278 >gi|170744988|ref|YP_001763287.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] gi|170659395|gb|ACB28442.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] Length = 374 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 ++ S+DD A+++ PGG A +++V KPV+ V+ + ASA Y ++ Sbjct: 104 QLAHASQDDRTRAVLLDFECPGGEAVGAFEAAAVVRQVAALKPVVAVVNGLCASAAYAMA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 + IV + + GSIGV+ + V L K GV + + K + P+ + P +V Sbjct: 164 SGATRIVTTPSGIAGSIGVVMLHTDVSGALAKAGVKPTLIFAGKHKTDGHPYGPL-PDSV 222 Query: 176 QM-MQDVVDSSYHWFVRLVSESR 197 + ++ ++ Y F+ V+ R Sbjct: 223 KADLRAEIEGFYAAFINCVATGR 245 >gi|222825064|dbj|BAH22222.1| putative minor capsid protein c [Wolbachia endosymbiont of Cadra cautella] Length = 358 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 58 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRGKKRIIAIANDDAYSA 117 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 118 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPI 177 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ ++ V+ Y V L++ +RN+ + + ++ ++ G +A ++GL D Sbjct: 178 TSESLENLKSEVNRLYEMLVELIARNRNLSVE-AIKSTEAGLYFGEKAVEIGLAD 231 >gi|260174732|ref|ZP_05761144.1| putative proteinase [Bacteroides sp. D2] gi|315922992|ref|ZP_07919232.1| protease [Bacteroides sp. D2] gi|313696867|gb|EFS33702.1| protease [Bacteroides sp. D2] Length = 288 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 11/219 (5%) Query: 38 VARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 VA I + G + ++ L +++ IS + ++ ++ PGG + + I ++ Sbjct: 72 VAVIILEGTLYSWETYRLEQQLRDISGNPKICGAVLWINGPGGMVAHVDLAAKMI--AES 129 Query: 96 RKPVITEVHEMAASAGY-LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KP+ T V SA + L + A +A+ VGS+G++ Y K + K G+ + Sbjct: 130 SKPIATYVAGTMGSAHFWLGTAAGRTFIASPMCEVGSVGIMLTYQSFKEYFRKQGIDYRE 189 Query: 155 V--KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S+ +K + E + + Q +V + F +S + I YD L L G+I Sbjct: 190 IYPDSADLKNYETRAIEKDNNEEPIKQRLV-VMHRIFCDAISRNLGIAYDPELPLFRGQI 248 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 +TG A G ID G E+ + + A ++RK+ + Sbjct: 249 FTGDVAVANGYIDQFGTLEDAVKWVLA---QATVRKVNE 284 >gi|152981575|ref|YP_001354459.1| hypothetical protein mma_2769 [Janthinobacterium sp. Marseille] gi|151281652|gb|ABR90062.1| phage-related protein [Janthinobacterium sp. Marseille] Length = 435 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 16/228 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E+ R++ D +++ L SPGG A + I+ KP+ ++ A SA Sbjct: 85 EIEARLDAALADPQVAGILLDLDSPGGEASGVFELAERIRAASTIKPIWAHANDAAYSAA 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + I+ A + ++T+ VGSIGV+ + K G++ +V + K + SP ++ Sbjct: 145 FAIAAACQRLTLSQTAGVGSIGVIALHVDQSVKDAKDGLNYTAVFAGSHKNDFSPHEPLS 204 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV---- 227 P+A+ +Q VD Y FV V + R + D G ++ G +A GL D V Sbjct: 205 PQAITALQTEVDRLYDIFVNQVGQMRGLDPDAVRATEAG-LFYGEQAVAAGLADAVMPFD 263 Query: 228 ----------GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ + Q A +S+ NPP+ F L+N Sbjct: 264 AVMTEFTDALAAKQRLAQPGVARASPRSLSTQSISNPPRTKSFT-LEN 310 >gi|254454366|ref|ZP_05067803.1| peptidase U7 [Octadecabacter antarcticus 238] gi|198268772|gb|EDY93042.1| peptidase U7 [Octadecabacter antarcticus 238] Length = 479 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I+ ++ KPV + V E A SAGY ++ ++ I+ T VGSIGV+ + + LD+ G Sbjct: 148 IRAIRATKPVWSFVAEHAFSAGYALASQADRILLPRTGAVGSIGVVVMHADMSGQLDQDG 207 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVL- 207 + + + S K + +P+S + P V+ +Q +D F V+ R + L Sbjct: 208 MRVTLIHSGEHKVDGNPYSPL-PDGVRADIQGEIDVLRFLFAETVAAGRAGRLSQEAALA 266 Query: 208 SDGRIWTGAEAKKVGLID 225 + + GA+A GL D Sbjct: 267 TKAATYRGADAVAAGLAD 284 >gi|23016403|ref|ZP_00056159.1| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 410 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 3/198 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAAS 109 ++ + IE + D A+++ + S GG + IQ ++++ KP+ E A S Sbjct: 85 DIADTIEAAATDPGVRAILLDVDSSGGEVGGLFDLVDHIQAIRSQCGKPIWAVADEAALS 144 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A Y I+C ++ + +T VGSIGV+ + + G++ V + K + +P Sbjct: 145 AAYAIACTADRLYVTQTGEVGSIGVVAVHRDESGADAQAGLAWSFVHAGAAKVDGNPHQP 204 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ A M+Q VD+ Y F LV+E R + D + ++ +++ G +A GL D VG Sbjct: 205 LSDSARAMLQADVDALYGKFTTLVAERRCLSPD-VVRATEAQVYRGDQAVTAGLADKVGT 263 Query: 230 QEEVWQSLYALGVDQSIR 247 L A SIR Sbjct: 264 MRIALADLGATLARPSIR 281 >gi|226227659|ref|YP_002761765.1| hypothetical protein GAU_2253 [Gemmatimonas aurantiaca T-27] gi|226090850|dbj|BAH39295.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 502 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 9/181 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A+++ SPGG + I+ + RKPV V SA Y ++ I Sbjct: 114 DHRVEAVVLQFDSPGGEVSGCSELGEQIRAARERKPVYAYVGGDCCSAAYWLAAQCTEIH 173 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDV 181 T+L G++GV V L + G+ + ++ SS A+P P ++ Q + D Sbjct: 174 VNNTALTGNLGVRMTAHDVSRRLKREGIDVITIVSSTTPAKPHDPTTDEAKARCQKIVDD 233 Query: 182 VDSSYHWFV---RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + + +H V R V ES+ Y++ G ++ G +A GL D V E + SL Sbjct: 234 LAAVFHAQVALGRSVEESQI--YEQ---YGRGAVFVGVDAVSHGLADAVTTYEALLASLT 288 Query: 239 A 239 A Sbjct: 289 A 289 >gi|94970200|ref|YP_592248.1| peptidase S49 [Candidatus Koribacter versatilis Ellin345] gi|94552250|gb|ABF42174.1| peptidase S49 [Candidatus Koribacter versatilis Ellin345] Length = 781 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 1/172 (0%) Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +A++ + SPGGS + + I + +K ++ +V AASA Y ++ ++ +V + Sbjct: 124 SAIVFDVDSPGGSVFGIAELADEIYAGRGKKKIVAQVAPRAASAAYWLAASAGEVVVTPS 183 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 GSIGV + + LD GV + + K E + ++ +A MQ++VD Y Sbjct: 184 GQAGSIGVFVAHEDLSKALDMQGVKETLISAGKYKVEGASSQPLSDEARAAMQNMVDQYY 243 Query: 187 HWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 FV+ V+ R + +GR+ + +A ++G++D + ++ +L Sbjct: 244 GAFVQGVARGRAVTAATVRNSFGEGRVVSAQDALQLGMVDRIATLDQTIAAL 295 >gi|320539111|ref|ZP_08038782.1| peptidase family S49 domain-containing protein [Serratia symbiotica str. Tucson] gi|320030749|gb|EFW12757.1| peptidase family S49 domain-containing protein [Serratia symbiotica str. Tucson] Length = 286 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 1/176 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + + + SPGG + I KP+ + + E A SA Y I+ A++ I Sbjct: 107 DPEVAGICLDIDSPGGEVAGCFDLVDEIYHTHGSKPIHSILTENAYSAAYAIASAADRIH 166 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T VGSIGV+ + + + G+++ + KAE +P+ +++ +A +QD V Sbjct: 167 VPRTGGVGSIGVIVIHCDWSQRIKEDGLAVSIITYGNRKAESNPYVKLSDQARAAIQDDV 226 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 D+ FV V+ +R I +KT+ + + A+ ++GL D V + ++ L+ Sbjct: 227 DTMGRLFVSTVARNRGIS-EKTIRNTQAACFLAADGVQLGLADAVMTPDAAFRKLF 281 >gi|157412171|ref|YP_001481512.1| hypothetical protein APECO1_O1R156 [Escherichia coli APEC O1] gi|99867196|gb|ABF67841.1| conserved hypothetical protein [Escherichia coli APEC O1] Length = 393 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 10/184 (5%) Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP+I V + ASA Y ++ I A +L+GSIGV + + + +GV + + Sbjct: 191 KPIIVSVKGICASACYYAVSPADAIYADSNALIGSIGVRMDHWNLSEIMSTVGVKNEPLT 250 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIP----YDKTLV-LSDG 210 + K PF ++ + MQ +++++ + F+ V R +D V L G Sbjct: 251 AGEFKDALDPFHPLSDSTREFMQKEILNTMHEKFITDVELGRGKKLLSRHDADAVSLYSG 310 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL-SIS 269 R+W +A K GL+D E+ L + S K++N P L L S+S Sbjct: 311 RVWPTPQAVKYGLVDGDLTSVEIRTRLSKM---YSTDTFKNYNEPHRNLRSALGMLMSLS 367 Query: 270 SLLE 273 S +E Sbjct: 368 SNIE 371 >gi|14591292|ref|NP_143370.1| nfeD protein [Pyrococcus horikoshii OT3] gi|3257935|dbj|BAA30618.1| 441aa long hypothetical nfeD protein [Pyrococcus horikoshii OT3] Length = 441 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 13/133 (9%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATAL 69 R ++LS++ L F S + N +VA+I +GQI + + +R I+ D+A A+ Sbjct: 2 RRILLSMIVLI---FLASPILAKNIVYVAQI--KGQITSYTYDQFDRYITIAEQDNAEAI 56 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH---EMAASAGYLISCASNIIVAAE 125 I+ L +PGG A +A+ +Q+++ K PVI V+ AASAG I+ S++I A Sbjct: 57 IIELDTPGGRA---DAMMNIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAP 113 Query: 126 TSLVGSIGVLFQY 138 + +G+ + Y Sbjct: 114 GTSIGACRPILGY 126 >gi|38348035|ref|NP_941284.1| putative peptidase [Serratia marcescens] gi|190410362|ref|YP_001965865.1| putative peptidase [Klebsiella pneumoniae] gi|226807771|ref|YP_002791467.1| hypothetical protein pEC-IMP_205 [Enterobacter cloacae] gi|226810085|ref|YP_002791780.1| hypothetical protein pEC-IMPQ_212 [Enterobacter cloacae] gi|38259512|emb|CAE51740.1| putative peptidase [Serratia marcescens] gi|146151156|gb|ABQ02922.1| putative peptidase [Klebsiella pneumoniae] gi|226425998|gb|ACO54091.1| conserved hypothetical protein [Enterobacter cloacae] gi|226426312|gb|ACO54404.1| conserved hypothetical protein [Enterobacter cloacae] Length = 393 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 10/184 (5%) Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP+I V + ASA Y ++ I A +L+GSIGV + + + +GV + + Sbjct: 191 KPIIVSVKGICASACYYAVSPADAIYADSNALIGSIGVRMDHWNLSEIMSTVGVKNEPLT 250 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIP----YDKTLV-LSDG 210 + K PF ++ + MQ +++++ + F+ V R +D V L G Sbjct: 251 AGEFKDALDPFHPLSDSTREFMQKEILNTMHEKFITDVELGRGKKLLSRHDADAVSLYSG 310 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL-SIS 269 R+W +A K GL+D E+ L + S K++N P L L S+S Sbjct: 311 RVWPTPQAVKYGLVDGDLTSVEIRTRLSKM---YSTDTFKNYNEPHRNLRSALGMLMSLS 367 Query: 270 SLLE 273 S +E Sbjct: 368 SNIE 371 >gi|91782184|ref|YP_557390.1| serine peptidase [Burkholderia xenovorans LB400] gi|91686138|gb|ABE29338.1| protein C, Serine peptidase, MEROPS family S49 [Burkholderia xenovorans LB400] Length = 323 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + A+++ + SPGG + AI + RKP++ +E A SA Y ++ A + Sbjct: 106 DPAVRAIVLDIDSPGGEIAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASACEQVT 165 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T G +GVL + L G+++ + S KA+ + + ++ A + ++ V Sbjct: 166 VPRTGGTGGVGVLVVHVDFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADV 225 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D++ + +V+ +R + + + ++G + GA + GL D V +E SL Sbjct: 226 DATAKMLIAMVAHNRGLSQAQ-VRDTEGATYLGAAGVRAGLADAVMSPDEALLSL 279 >gi|82701192|ref|YP_410758.1| peptidase S49 [Nitrosospira multiformis ATCC 25196] gi|82409257|gb|ABB73366.1| protein C, Serine peptidase, MEROPS family S49 [Nitrosospira multiformis ATCC 25196] Length = 321 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 9/182 (4%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D S +++++ SPGG + I ++ KP+ + V M ASA Y ++ A++ I Sbjct: 86 DSSVNKIVLNIDSPGGVVSGVSPLADQIFSARSIKPIESFVSGMGASAAYWLAAATSHIT 145 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM-KAEPSPFSEVNPKAVQMMQDV 181 ++T+LVGSIGV+ K GV + SS K P P P+ +Q++Q Sbjct: 146 ISDTALVGSIGVVGTAIDDKARQQMQGVIFHQIVSSNAPKKRPDP---ATPEGLQVLQKE 202 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 +DS F V+ R + ++ V SD G + G EA + GL D +G E S Sbjct: 203 IDSLASVFTAKVARYRGV--NEMKVNSDFGQGGVLVGVEAVRAGLADAIGTFESTLVSSG 260 Query: 239 AL 240 A+ Sbjct: 261 AM 262 >gi|27311191|ref|NP_758917.1| ORF24 [Vibrio phage VHML] gi|26891711|gb|AAN12323.1| ORF24 [Vibrio phage VHML] Length = 426 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 4/144 (2%) Query: 96 RKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 ++PV ++ +E SA Y ++C + + ++ GSIGV+ + K+G+SI Sbjct: 139 KRPVTRVSLENESCYSAAYALACCCDQVFLTSSAGAGSIGVICGRLDQTEYNRKMGLSI- 197 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +V S KA+ SP ++ Q +Q ++ F LV+E+R + ++ L G + Sbjct: 198 AVVSGDYKADFSPHKVLSDDERQRLQALIVQLGSEFHNLVAEARGMTAEQVKALKAG-CF 256 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSL 237 TG A GL D V Q+E + L Sbjct: 257 TGRXAVDNGLADGVMSQDEFYNYL 280 >gi|18314240|ref|NP_560907.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] gi|18161836|gb|AAL65089.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] Length = 608 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 30/235 (12%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 LI+ ++++ D+ +I+ ++SPGG+ A E ++ I+ + K V V +AAS Y Sbjct: 104 LIKYVKKLQFDNKTAGVILLINSPGGAVGATERLYSTIKGLN--KTVYAVVAGLAASGAY 161 Query: 113 LISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A+ I A +S VGSIGV+ +P +L L I + PF Sbjct: 162 YTAVAAGRIYATPSSWVGSIGVVALLWP--DEYLIDLPDYIYTT---------GPFKYYG 210 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + D+ + + FV V + R + D V +I+ A ++GLID +GG Sbjct: 211 MDLTEFYNDIEKTRAN-FVAAVLKGRAGRLKADPE-VFETAKIFNAETALRLGLIDKIGG 268 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +W ++ + + + KNY D+ ++ +PL+ K+ Sbjct: 269 ---LWDAVEDMARELGL---------KNYTVVDIYEKYNATGFGIVVPLISGNKI 311 >gi|126458778|ref|YP_001055056.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] gi|126248499|gb|ABO07590.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] Length = 612 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 25/183 (13%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L++ ++R+ DD +++ ++SPGG+ A E ++ I + K + + + AS Y Sbjct: 105 LVKYVKRLEFDDRVAGVVLLINSPGGAVGATERLYSTIAGLNKTKYAV--IAGLGASGAY 162 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEVN 171 + A+ I A +S VGS+GV I + AE P Sbjct: 163 YTAVAAEKIYATPSSWVGSVGV-----------------IALIAPEDYLAEVPDWIYTTG 205 Query: 172 P-----KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 P K + + D V+ + FV V + R + I+ EA ++GLID Sbjct: 206 PWKYYGKDLLALYDDVEKTRENFVNAVLKGRGDRLKDLKAVETAEIFRADEALRIGLIDA 265 Query: 227 VGG 229 +GG Sbjct: 266 IGG 268 >gi|117925862|ref|YP_866479.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609618|gb|ABK45073.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 418 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++ + D + A+++ + SPGG + I + KP I + + A SA YLI Sbjct: 75 EKLLDAATDPAVRAILMDIDSPGGEVGGVFDLADMISEAGQGKP-IWALADDAFSAAYLI 133 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I+ +T+ VGSIGV+ + K G S +V + K + S + ++ +A Sbjct: 134 ASQAHRIIVPQTAGVGSIGVIAVHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEA 193 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q VD Y FV V+ R + ++ + ++ ++ G +A +VGL D VG Sbjct: 194 RTNLQLEVDRLYGMFVAAVAAGRKM-HESAVRATEAGLFFGDKAIRVGLADQVG 246 >gi|221369919|ref|YP_002521015.1| Peptidase U7 [Rhodobacter sphaeroides KD131] gi|221162971|gb|ACM03942.1| Peptidase U7 [Rhodobacter sphaeroides KD131] Length = 477 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 2/144 (1%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +I+ + D + L + + S GG + I+ ++ KPV V E A SAGY ++ Sbjct: 113 QIKAAASDPAVRGLALEIDSFGGEVAGVFDLADRIRAIRGAKPVWAFVAEHALSAGYALA 172 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I+ T +GSIGV+ + + LD+ GV + + S K + +P+ + P+AV Sbjct: 173 SQADRILLPRTGALGSIGVVVLHADLSGKLDQDGVRVTLIHSGQHKVDGNPYQPL-PEAV 231 Query: 176 QM-MQDVVDSSYHWFVRLVSESRN 198 Q +Q +D F V+ R+ Sbjct: 232 QGDIQREIDVLRFLFAETVAAGRS 255 >gi|42520455|ref|NP_966370.1| prophage LambdaW4, minor capsid protein C, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|58696804|ref|ZP_00372334.1| hypothetical protein WwSim0278 [Wolbachia endosymbiont of Drosophila simulans] gi|58699409|ref|ZP_00374166.1| hypothetical protein WwAna0001 [Wolbachia endosymbiont of Drosophila ananassae] gi|99034491|ref|ZP_01314479.1| hypothetical protein Wendoof_01000714 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225630333|ref|YP_002727124.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|225630727|ref|YP_002727518.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|42410194|gb|AAS14304.1| prophage LambdaW4, minor capsid protein C, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|58534074|gb|EAL58316.1| hypothetical protein WwAna0001 [Wolbachia endosymbiont of Drosophila ananassae] gi|58536999|gb|EAL60149.1| hypothetical protein WwSim0278 [Wolbachia endosymbiont of Drosophila simulans] gi|225592314|gb|ACN95333.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|225592708|gb|ACN95727.1| minor capsid protein C, putative [Wolbachia sp. wRi] Length = 353 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 89/175 (50%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IE D +I+ + SPGG + I + + +K ++ ++ A SA Sbjct: 70 EKISEEIEEALIDKEVETIILDIDSPGGEVNGLFDLSDFIYQARRKKRIVAIANDDAYSA 129 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ ++ TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 130 AYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 189 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ ++ V+ Y V L++ +RN+ + + ++ ++ G +A ++GL D Sbjct: 190 TSESLESLKSEVNRLYGMLVELIARNRNLSVE-AIKSTEAGLYFGEKAVEIGLAD 243 >gi|189022217|ref|YP_001931948.1| serine peptidase S49 family [Vibrio shilonii] gi|161087235|gb|ABX56715.1| putative serine peptidase S49 family [Vibrio shilonii] Length = 434 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 31/225 (13%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + S A+I+++ SPGG A + I + +KPV V SA Y I+ A + + Sbjct: 96 ESSVKAVILNVDSPGGEASGIHELSEMIHASRGKKPVRAYVGGDGCSAAYWITTACDRVT 155 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ---MMQ 179 T+ VGSIG + + +P + K + SP ++P++ Q +Q Sbjct: 156 MDATARVGSIGTVVSF-VKRP-------DAEGAKRFEFVSSQSPNKRLDPESEQGQTAIQ 207 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +D+ F+ V+ + + DK V SD G + G +A G+ +G E + S Sbjct: 208 TQLDAMAEVFISRVARNMGVTSDK--VKSDFGQGGVKIGQQAVDAGMAHELGSLEALIAS 265 Query: 237 LYALGVDQSIRKIKDWN----PPKNYWFCDLKNLSISSLLEDTIP 277 L + G QS ++ N P ++W L+DT P Sbjct: 266 L-SNGKSQSPTASRNTNAQHGPNASHWLA----------LDDTSP 299 >gi|117924626|ref|YP_865243.1| serine peptidase [Magnetococcus sp. MC-1] gi|117608382|gb|ABK43837.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 436 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E++ + D + A+++ + SPGG + I + KP I + + A SA YLI Sbjct: 93 EKLLDAATDPAVRAILMDIDSPGGEVGGVFDLADMISEAGQGKP-IWALADDAFSAAYLI 151 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I+ +T+ VGSIGV+ + K G S +V + K + S + ++ +A Sbjct: 152 ASQAHRIIVPQTAGVGSIGVIAVHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEA 211 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +Q VD Y FV V+ R + ++ + ++ ++ G +A +VGL D VG Sbjct: 212 RTNLQLEVDRLYGMFVAAVAAGRKM-HESAVRATEAGLFFGDKAIRVGLADQVG 264 >gi|213584577|ref|ZP_03366403.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 84 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS +N IVA+ ++L GSIG+ V+ L +GV V +SP+ A+ S Sbjct: 1 AASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGVHSDGVSTSPL-ADISM 59 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFV 190 ++P+ QMMQ ++ Y F+ Sbjct: 60 TKALSPEVQQMMQLSIEYGYKRFI 83 >gi|317485330|ref|ZP_07944210.1| peptidase family S49 [Bilophila wadsworthia 3_1_6] gi|316923456|gb|EFV44662.1| peptidase family S49 [Bilophila wadsworthia 3_1_6] Length = 401 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 3/166 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D SA A++ ++SPGG + + AI + + +K + + ASA Y ++ A+ + Sbjct: 80 DPSARAILFDITSPGGVVAGTKELADAIAEARTKKHCAAYANGLCASAAYWLASATGTVY 139 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A T+ VGSIGV+ +K G+S ++ KA E+ + + Q+ + Sbjct: 140 APLTATVGSIGVIMTITNYAKLEEKWGISTVTITGGKWKA-AGQGGELTDEERRYFQERI 198 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI-DVV 227 ++ + F V + D L + ++ A+++GL+ D+V Sbjct: 199 NTLHQIFKADVGRHMGLTADPQL-WGEAQLLLAQPARELGLVTDIV 243 >gi|2282048|gb|AAB65791.1| Z2Z3 protein [Vibrio shilonii AK1] Length = 330 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 31/225 (13%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + S A+I+++ SPGG A + I + +KPV V SA Y I+ A + + Sbjct: 77 ESSVKAVILNVDSPGGEASGIHELSEMIHASRGKKPVRAYVGGDGCSAAYWITTACDRVT 136 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ---MMQ 179 T+ VGSIG + + +P + K + SP ++P++ Q +Q Sbjct: 137 MDATARVGSIGTVVSF-VKRP-------DAEGAKRFEFVSSQSPNKRLDPESEQGQTAIQ 188 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +D+ F+ V+ + + DK V SD G + G +A G+ +G E + S Sbjct: 189 TQLDAMAEVFISRVARNMGVTSDK--VKSDFGQGGVKIGQQAVDAGMAHELGSLEALIAS 246 Query: 237 LYALGVDQSIRKIKDWN----PPKNYWFCDLKNLSISSLLEDTIP 277 L + G QS ++ N P ++W L+DT P Sbjct: 247 L-SNGKSQSPTASRNTNAQHGPNASHWLA----------LDDTSP 280 >gi|293414565|ref|ZP_06657214.1| phage capsid assembly protein [Escherichia coli B185] gi|291434623|gb|EFF07596.1| phage capsid assembly protein [Escherichia coli B185] Length = 538 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 3/174 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L R++ D +++ + SPGG A I +++ +KPV ++MA SA Sbjct: 106 LTARLQMAVNDPDVRGILLDIDSPGGQAAGAFDCADMIYRLREQKPVWALCNDMACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + +T+ +GSIGV+ + + L + GV I + S K + + + P Sbjct: 166 LLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQLAQEGVDITLIYSGQHKVDGNSIQAL-P 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 V+ Q +D + FV V+ + + + ++ ++ G GL D Sbjct: 225 AGVRADFQRRIDEARRMFVDKVALYTGLSSEAVMN-TEAAVYDGQAGIDAGLAD 277 >gi|319406644|emb|CBI80285.1| putative capsid protein of prophage [Bartonella sp. 1-1C] Length = 348 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 3/172 (1%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ + S GG A + Q + + KP+ +E A SA Y I+C+++ I A Sbjct: 105 AVLLDIDSGGGEAGGVFDLVEEFQALSKQYGKPIWAHANEFACSAAYAIACSASQIWVAR 164 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T +VGSIGV+ + +K G V K +P + +A MQ Sbjct: 165 TGVVGSIGVVCAHLDQSYADEKQGHKWTFVFEGDHKVHGNPHEPLADEAKIKMQADCALL 224 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Y FV LV+++R + + + + G++A +GL D G + ++L Sbjct: 225 YEMFVDLVAKNRAMSA-AAIRETKAETFIGSQAITLGLADAQGTLAQALEAL 275 >gi|193062745|ref|ZP_03043839.1| head-tail preconnector protein GP5 [Escherichia coli E22] gi|192931867|gb|EDV84467.1| head-tail preconnector protein GP5 [Escherichia coli E22] Length = 538 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 3/174 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L R++ D +++ + SPGG A I +++ +KPV ++MA SA Sbjct: 106 LTARLQMAVNDPDVRGILLDIDSPGGQAAGAFDCADMIYRLREQKPVWALCNDMACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + +T+ +GSIGV+ + + L + GV I + S K + + + P Sbjct: 166 LLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQLAQEGVDITLIYSGQHKVDGNSIQAL-P 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 V+ Q +D + FV V+ + + + ++ ++ G GL D Sbjct: 225 AGVRADFQRRIDEARRMFVDKVALYTGLSSEAVMN-TEAAVYDGQAGIDAGLAD 277 >gi|809692|emb|CAA28163.1| unnamed protein product [Escherichia coli] Length = 125 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q++++R P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL Sbjct: 25 LQRLRDRNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSK 84 Query: 149 GVSIK 153 + I+ Sbjct: 85 DIDIE 89 >gi|163848542|ref|YP_001636586.1| hypothetical protein Caur_2998 [Chloroflexus aurantiacus J-10-fl] gi|222526476|ref|YP_002570947.1| hypothetical protein Chy400_3243 [Chloroflexus sp. Y-400-fl] gi|163669831|gb|ABY36197.1| protein of unknown function DUF114 [Chloroflexus aurantiacus J-10-fl] gi|222450355|gb|ACM54621.1| protein of unknown function DUF114 [Chloroflexus sp. Y-400-fl] Length = 274 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 35/202 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I+ RD + + L +PGG A E I RA+ K+ V V Sbjct: 67 IEDSEAVLRAIKMTDRD---IPIDLILHTPGGLVLAAEQIARAL--TKHAAKVTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV E +++G + L Q+P SI SV E Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQHP---------AASILSV------LERK 166 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDK----TLVLSDGRIWTG---- 215 P SE++ + + MM D+ + + R V E +P ++ L+ G +WT Sbjct: 167 PLSEIDDETL-MMADIAEKAIRQVKRTVCELLRDKMPVERAEEVAHTLASG-VWTHDYPI 224 Query: 216 --AEAKKVGLIDVVGGQEEVWQ 235 +EA+++GL EE++Q Sbjct: 225 TVSEARELGLPISTEVPEEIYQ 246 >gi|330994906|ref|ZP_08318828.1| Head-tail preconnector protein GP5 [Gluconacetobacter sp. SXCC-1] gi|329758167|gb|EGG74689.1| Head-tail preconnector protein GP5 [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 1/173 (0%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 S A ++ + SPGG+ + I + + KP++ V+E A SA Y ++ +++ I+ Sbjct: 99 SIKATVLLVDSPGGTVAGCFDLADRIYEGRGAKPIVAIVNESAYSAAYALASSADTIIVP 158 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 T VGSIGV+ + + L++ G+ + + + K + P + ++ +A + Q +D+ Sbjct: 159 RTGGVGSIGVVGMHVDITGALEQAGIKVTTFQFGDQKTDSYPTTTMSEEAAKRFQADIDA 218 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 FV V+ +R+IP D+ G + G GL D V G E ++ L Sbjct: 219 MGELFVATVARNRDIPADRVRATQAG-TFLGQRGIDAGLADAVMGAEAAFREL 270 >gi|225630471|ref|YP_002727262.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|225592452|gb|ACN95471.1| minor capsid protein C, putative [Wolbachia sp. wRi] Length = 345 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IER D S +++ + SPGG + I + + +K +I ++ A SA Sbjct: 68 EKIHEEIERALEDKSIETILLDIDSPGGEVNGVFDLADFIYESRAKKRIIAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ ++ V+ Y V L++ +R++ + + ++ ++ G +A ++GL D Sbjct: 188 TSESLENLKSEVNRLYGMLVELIARNRSLSVE-AIKNTEAGLYFGEKAIEMGLAD 241 >gi|114327168|ref|YP_744325.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] gi|114315342|gb|ABI61402.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] Length = 270 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAE 125 ALI+S+ SPGGS + I I++ K V + E+ AS GY ++CA++ I+A+ Sbjct: 56 ALILSIDSPGGSPVQSDQIAALIRREAEEKSFRVYAVIQEVGASGGYWLACAADEIMASP 115 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S+VGSIGV+ + +++LG+ + + K PF P+ V + +++ Sbjct: 116 MSIVGSIGVVGGGFGLNRLIERLGIDRRLHTAGQNKRRGDPFLPEKPEDVAFIAGLMEDI 175 Query: 186 YHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLID 225 + F V + R + D++ + DG G +A +GLID Sbjct: 176 HASFKDWVRQRRGARLTSDESAIF-DGGYMLGRQAVTLGLID 216 >gi|237721549|ref|ZP_04552030.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449345|gb|EEO55136.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 288 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 15/221 (6%) Query: 38 VARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 VA I + G + ++ L +++ IS + ++ ++ PGG + + I ++ Sbjct: 72 VAVIILEGTLYSWETYRLEKQLRDISDNPKICGAVLWINGPGGMVAHVDLAAKMI--AES 129 Query: 96 RKPVITEVHEMAASAGY-LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KP+ T V SA + L + A +A+ VGS+G++ Y K + K G+ + Sbjct: 130 SKPIATYVAGTMGSAHFWLGTAAGRTFIASPMCEVGSVGIMLTYQSFKEYFRKQGIDYRE 189 Query: 155 V--KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + S+ +K + E N + ++ V+ + F +S + I YD L L G Sbjct: 190 IYPDSADLKNYETRVIEKENNEEPIKQRLAVM---HRIFCDAISRNLGIAYDPELPLFRG 246 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 +I+TG A G ID G E+ + + A ++RK+ + Sbjct: 247 QIFTGDVAVANGYIDQFGTLEDAVKWVLA---QATVRKVNE 284 >gi|323185713|gb|EFZ71074.1| head-tail preconnector protein GP5 [Escherichia coli 1357] Length = 538 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 11/151 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L R++ D +++ + SPGG A I +++ +KPV ++MA SA Sbjct: 106 LTARLKSAVNDPDVRGILLDIDSPGGQAAGAFDCADMIYRLREQKPVWALCNDMACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + +T+ +GSIGV+ + + L + GV I + S K V+ Sbjct: 166 LLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQLAQEGVDITLIYSGQHK--------VDG 217 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++Q + V + F R + E+R + DK Sbjct: 218 NSIQALPTGVRAD---FQRRIDEARRMFVDK 245 >gi|24112121|ref|NP_706631.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 301] gi|30062238|ref|NP_836409.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 2457T] gi|24050954|gb|AAN42338.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 301] gi|30040483|gb|AAP16215.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 2457T] gi|281600080|gb|ADA73064.1| Head-tail preconnector gp5 [Shigella flexneri 2002017] gi|313649543|gb|EFS13973.1| head-tail preconnector protein [Shigella flexneri 2a str. 2457T] gi|332761373|gb|EGJ91659.1| head-tail preconnector protein GP5 [Shigella flexneri 2747-71] gi|332763428|gb|EGJ93668.1| head-tail preconnector protein GP5 [Shigella flexneri K-671] Length = 501 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 69/153 (45%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + S GG A I +++ KPV ++ A SA Sbjct: 106 IVACLQQAMADTQVRGVLLDIDSSGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 225 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K Q MQ +D++ F V+ + D + Sbjct: 226 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVM 258 >gi|6723229|dbj|BAA89626.1| orf7 [Wolbachia phage WO] Length = 353 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E QE IE E +S D T L+ + SPGG + I + + +K +I ++ A Sbjct: 73 EKIQEEIE--EALSNKDIETILL-DIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDA 129 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SA Y I+ ++ + + TS VGSIGV+ + F +K G+ ++ + K + +P Sbjct: 130 YSAAYAIASSAEKVFVSRTSGVGSIGVIASHIDQSRFDEKQGIKYTTIFAGSRKNDLNPH 189 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + ++++ +Q V Y F++L++ +R + +K G ++ G +A ++GL D V Sbjct: 190 EPMTSESLESLQKEVGRLYEMFLQLIARNRGLSIEKIRSTEAG-LYFGEKAVEIGLADGV 248 >gi|333021224|gb|EGK40478.1| head-tail preconnector protein GP5 [Shigella flexneri K-304] Length = 467 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 69/153 (45%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + S GG A I +++ KPV ++ A SA Sbjct: 72 IVACLQQAMADTQVRGVLLDIDSSGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 131 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 132 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 191 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K Q MQ +D++ F V+ + D + Sbjct: 192 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVM 224 >gi|535570|gb|AAA57031.1| protease IV [Escherichia coli] Length = 324 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 214 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 273 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG Sbjct: 274 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 324 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 63 DDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D + T +++ L + GG + + I +A+++ ++ + V E + Y ++ +N I Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKI 60 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 61 WLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADS 120 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG----LIDVVGGQE 231 + + ++ V+ +R IP + L +G TG + K L+D + Sbjct: 121 RWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSA 180 Query: 232 EVWQSL 237 E+ ++L Sbjct: 181 EIEKAL 186 >gi|535532|gb|AAA57012.1| protease IV [Escherichia coli] gi|535538|gb|AAA57015.1| protease IV [Escherichia coli] gi|535540|gb|AAA57016.1| protease IV [Escherichia coli] gi|535568|gb|AAA57030.1| protease IV [Escherichia coli] Length = 324 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 214 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 273 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG Sbjct: 274 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 324 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 63 DDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D + T +++ L + GG + + I +A+++ ++ + V E + Y ++ +N I Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKI 60 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 61 WLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADS 120 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG----LIDVVGGQE 231 + + ++ V+ +R IP + L +G TG + K L+D + Sbjct: 121 RWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSA 180 Query: 232 EVWQSL 237 E+ ++L Sbjct: 181 EIEKTL 186 >gi|535524|gb|AAA57008.1| protease IV [Escherichia coli] gi|535526|gb|AAA57009.1| protease IV [Escherichia coli] gi|535528|gb|AAA57010.1| protease IV [Escherichia coli] gi|535542|gb|AAA57017.1| protease IV [Escherichia coli] Length = 324 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 214 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 273 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG Sbjct: 274 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 324 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 11/186 (5%) Query: 63 DDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D + T +++ L + GG + + I +A+++ ++ + V E + Y ++ +N I Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKI 60 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 61 WLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADS 120 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG----LIDVVGGQE 231 + + ++ V+ +R IP ++ L +G TG + K L+D + Sbjct: 121 RWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSA 180 Query: 232 EVWQSL 237 E+ ++L Sbjct: 181 EIEKAL 186 >gi|535534|gb|AAA57013.1| protease IV [Escherichia coli] Length = 324 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 214 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 273 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG Sbjct: 274 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 324 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 63 DDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D + T +++ L + GG + + I +A+++ ++ + + E + Y ++ +N I Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQGQYYLASFANKI 60 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 61 WLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADS 120 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG----LIDVVGGQE 231 + + ++ V+ +R IP + L +G TG + K L+D + Sbjct: 121 RWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSA 180 Query: 232 EVWQSL 237 E+ ++L Sbjct: 181 EIEKTL 186 >gi|535536|gb|AAA57014.1| protease IV [Escherichia coli] Length = 324 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 214 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 273 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG Sbjct: 274 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 324 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 63 DDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D + T +++ L + GG + + I +A+++ ++ + + E + Y ++ +N I Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYSQGQYYLASFANKI 60 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 61 WLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADS 120 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG----LIDVVGGQE 231 + + ++ V+ +R IP + L +G TG + K L+D + Sbjct: 121 RWIGELWQNYLNTVAANRQIPAKQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSA 180 Query: 232 EVWQSL 237 E+ ++L Sbjct: 181 EIEKTL 186 >gi|332768316|gb|EGJ98501.1| peptidase S49 family protein [Shigella flexneri 2930-71] Length = 467 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 69/153 (45%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + S GG A I +++ KPV ++ A SA Sbjct: 72 IVACLQQAMADTQVRGVLLDIDSSGGQATGAFDCADMIYRLRQLKPVWALCNDTACSAAM 131 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 132 LLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESLPA 191 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K Q MQ +D++ F V+ + D + Sbjct: 192 KVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVM 224 >gi|58698702|ref|ZP_00373591.1| hypothetical protein WwAna1181 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534788|gb|EAL58898.1| hypothetical protein WwAna1181 [Wolbachia endosymbiont of Drosophila ananassae] Length = 345 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 90/175 (51%), Gaps = 1/175 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IER D S +++ + SPGG + I + + +K +I ++ A SA Sbjct: 68 EKIHEEIERALEDKSIETILLDIDSPGGEVNGVFDLADFIYESRAKKRIIAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIG++ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKIFLTRTSGVGSIGIIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++++ ++ V+ Y V L++ +R++ + + ++ ++ G +A ++GL D Sbjct: 188 TSESLENLKSEVNRLYGMLVELIARNRSLSVE-AIKNTEAGLYFGEKAIEMGLAD 241 >gi|535530|gb|AAA57011.1| protease IV [Escherichia coli] Length = 324 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 10/111 (9%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 D + + G I D +E +I D A+++ ++SPGG+ A Sbjct: 214 DTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGTVTAS 273 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 E I + + KPV+ + MAAS GY IS +N IVA ++L GSIG Sbjct: 274 EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIG 324 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 11/186 (5%) Query: 63 DDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D + T +++ L + GG + + I +A+++ ++ + V E + Y ++ +N I Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKI 60 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 61 WLSPQGVVDLHGFATNSLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADS 120 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL----VLSDGRIWTGAEAKKVG----LIDVVGGQE 231 + + ++ V+ +R IP + L +G TG + K L+D + Sbjct: 121 RWIGELWQNYLNTVAANRQIPAHQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSA 180 Query: 232 EVWQSL 237 E+ ++L Sbjct: 181 EIEKAL 186 >gi|331650031|ref|ZP_08351104.1| head-tail preconnector protein GP5 [Escherichia coli M605] gi|331040976|gb|EGI13133.1| head-tail preconnector protein GP5 [Escherichia coli M605] Length = 501 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 3/174 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D S +++ + SPGG A I +++ +KPV ++MA SA Sbjct: 106 IVTCLQQAMADTSVRGVLLDIDSPGGQAAGAFDCADMIYRLREQKPVWALCNDMACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L++ A + + +T+ GSIGV+ + + L + GV I + S K + + + P Sbjct: 166 LLAAACSRRLITQTAKTGSIGVMMAHTSYEKQLAQDGVDITLIYSGQRKVDGNSIQAL-P 224 Query: 173 KAVQM-MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 V+ Q +D + F V+ + D + ++ ++ G + GL D Sbjct: 225 AGVRADFQQRIDEARRMFAEKVAIYTGLSVDAVME-TEAAVFDGQSGIEAGLAD 277 >gi|224535172|ref|ZP_03675711.1| hypothetical protein BACCELL_00033 [Bacteroides cellulosilyticus DSM 14838] gi|224523222|gb|EEF92327.1| hypothetical protein BACCELL_00033 [Bacteroides cellulosilyticus DSM 14838] Length = 292 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 22/180 (12%) Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY-LISCASNIIVAAE 125 +++ ++ PGG + + R I++ + KP+ + + ASA + +S V++ Sbjct: 109 AGIVLFVNGPGGMITRVDLLERMIRE--SSKPIAAYITGVCASAHFWFVSACGRKFVSSP 166 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +GS G+++ Y K + ++LGV +K + +++ K ++ M++ D S Sbjct: 167 MDEIGSCGIIYTYQSFKKYYEELGVELKDIYPDS--------ADLKNKMIRDMEEKQDDS 218 Query: 186 --------YH-WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE--VW 234 YH F + V+ + I YD+ L G+ + A G +D G E+ VW Sbjct: 219 LIKEKLSFYHNLFAQAVARNLGIKYDRNDPLFRGQTYFADVALANGYVDAYGTLEDAIVW 278 >gi|325578442|ref|ZP_08148577.1| SppA protein [Haemophilus parainfluenzae ATCC 33392] gi|325160178|gb|EGC72307.1| SppA protein [Haemophilus parainfluenzae ATCC 33392] Length = 223 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 8/127 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 +S E P V + +G I S+ E I I +++ D +++ L SPGG + Sbjct: 94 NSEKETPKPCVYVLDFKGDISASETTALREEISAIINVAKADDE--VLLRLESPGGVVHG 151 Query: 83 GEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K + +T V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P + Sbjct: 152 YGLAASQLARLKQKGIKLTVAVDKVAASGGYMMACVADRIVSAPFAIIGSIGVVAQIPNI 211 Query: 142 KPFLDKL 148 L + Sbjct: 212 HRLLKNM 218 >gi|83309474|ref|YP_419738.1| periplasmic serine protease [Magnetospirillum magneticum AMB-1] gi|82944315|dbj|BAE49179.1| Periplasmic serine protease [Magnetospirillum magneticum AMB-1] Length = 410 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 6/192 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAAS 109 ++ E IE + D A+++ + S GG + IQ ++++ KP+ E A S Sbjct: 85 DIAETIEAAATDPGIRAILLDVDSSGGEVGGLFDLVDHIQAIRSQCGKPIWAVADEAALS 144 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A Y I+C ++ + +T VGSIGV+ + + G++ V + K + +P Sbjct: 145 AAYAIACTADRLYVTQTGEVGSIGVVAVHRDESGADAQAGLAWTFVHAGAAKVDGNPHQP 204 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ A +Q VD+ Y F LV+E R + D ++ ++ G +A GL D VG Sbjct: 205 LSDSARAALQADVDALYGKFATLVAERRRLSPDAVRA-TEAVVYRGDQAVAAGLADKVG- 262 Query: 230 QEEVWQSLYALG 241 + Q+L LG Sbjct: 263 --TLRQALADLG 272 >gi|297626322|ref|YP_003688085.1| SppA, Periplasmic serine proteases [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922087|emb|CBL56655.1| SppA, Periplasmic serine proteases [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 418 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 21/210 (10%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNII 121 DSA L++ + +PGGS AI A+ + + R K V M+AS G N I Sbjct: 159 DSAAGLVLLMDTPGGSINGSRAIADAVDRYEQRTGKKSFAFVEGMSASGGMYAMAGVNRI 218 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLD----KLGVSIKSVKSSP-------MKAEPSPFSEV 170 A + ++VGSIGV+ P+ + + D G+ V +S + E F Sbjct: 219 YADQGTMVGSIGVIMG-PFAR-YRDVTAVDGGLLGNGVTASGGIDQFYLTQGEAKDFGNA 276 Query: 171 NPKAVQMMQDVVDSS----YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 Q +DV + Y FV VS SR I + ++ AK L+D Sbjct: 277 FRDMTQKERDVYTAGLSREYDAFVNWVSTSRGIAPETIRNDLGAYMFDAQTAKDKHLVDD 336 Query: 227 VGGQEEVWQSLYA-LGVDQSIRK-IKDWNP 254 V G+EE ++ + GVD K + D P Sbjct: 337 VLGREEAFRQIARDAGVDPDQTKLVTDAEP 366 >gi|255017492|ref|ZP_05289618.1| hypothetical protein LmonF_06458 [Listeria monocytogenes FSL F2-515] Length = 112 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 37/53 (69%) Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 SY+ FV++V++ R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 1 SYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEAL 53 >gi|303245382|ref|ZP_07331666.1| peptidase S49 [Desulfovibrio fructosovorans JJ] gi|302493231|gb|EFL53093.1| peptidase S49 [Desulfovibrio fructosovorans JJ] Length = 448 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 17/195 (8%) Query: 50 SQELIERIERISRDDSATALIV-SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S E + R + + DD A A IV ++ SPGG + + KPV+ + A Sbjct: 89 SVETLARDLQAALDDPAVASIVLNIDSPGGQVSGIHEFASQVFYAGSVKPVVAYIQGTGA 148 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y I+ A++ I A ++VGSIG++ P D +SI S + +P Sbjct: 149 SAAYWIASATSRIFADAAAVVGSIGIVATIPKN----DGKTLSIVSSR--------APKK 196 Query: 169 EVNPKAVQMMQDVV---DSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLI 224 V+P+ + +VV D + FV V+ R ++ G + GA A G+ Sbjct: 197 RVDPETEEGRAEVVRTLDDLHAVFVGDVAAFRGFTREEVEQNFGQGGVLVGARAVAAGMA 256 Query: 225 DVVGGQEEVWQSLYA 239 D +G E V L A Sbjct: 257 DALGSLEGVIAELSA 271 >gi|119872893|ref|YP_930900.1| peptidase S49 [Pyrobaculum islandicum DSM 4184] gi|119674301|gb|ABL88557.1| peptidase S49 [Pyrobaculum islandicum DSM 4184] Length = 550 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 27/233 (11%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ +L++ + +S+ D +++ ++SPGG+ E ++ + + K + + + A Sbjct: 55 ETDKLVKALTELSQRDDVAGIVLVINSPGGTVSGTETLYTTLLGLNKTKYAV--IVGLGA 112 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y + A+ I AA +S VGSIGV+ + P L + + P+K Sbjct: 113 SGAYYTAVAAERIYAAPSSWVGSIGVV---AVIWPDLYLYDAADYIYTTGPLKYYGEDLH 169 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ Q+ V++ L + I D VL ++T EA K+GL+D +G Sbjct: 170 GYYDDVEKIRQNFVEAV------LRGRAGRIKADPA-VLETAGLFTAEEALKLGLVDKIG 222 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNY---WFCDLKNLSISSLLEDTIPL 278 GV + R + + +NY + DL N++ ++ +PL Sbjct: 223 ------------GVLDAARDMAEELGLRNYSLVYLGDLMNMTAAAASAWRVPL 263 >gi|85713379|ref|ZP_01044387.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] gi|85692795|gb|EAQ30785.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] Length = 104 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 47/89 (52%) Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V V ++AAS GY+++C N I++A + +GSIGV+ Q P V +L + I+ + Sbjct: 16 VTIAVDKVAASGGYMMACVGNNILSAPFAFIGSIGVVAQLPNVNKWLKNHDIDIEHFTAG 75 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 K + E + ++ + ++S +H Sbjct: 76 EYKRTLTVLGENTEEGRRIFKQDLESIHH 104 >gi|91782762|ref|YP_557968.1| serine peptidase [Burkholderia xenovorans LB400] gi|91686716|gb|ABE29916.1| protein C, Serine peptidase, MEROPS family S49 [Burkholderia xenovorans LB400] Length = 293 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D+S A+++ + SPGG + +I ++ KP+ E A SA Y I+ A++ I+ Sbjct: 115 DESVRAIVLDIDSPGGEVAGCFDLVDSIYAARDVKPIWAICTESAYSAAYAIATAASRII 174 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T GS+GV+ + L K G+ ++ + KA+ S ++ A Q V Sbjct: 175 VPRTGGTGSVGVICMHVDFSQALTKAGIEVELIYFGDKKADGSDMKPLSKDARARFQSDV 234 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D+ FV V+ +R + G + GA ++G D V +E + SL Sbjct: 235 DAMGQLFVETVARNRGLTTANVRGTQAG-TFLGAAGVEIGFADAVMSPDEAFASL 288 >gi|217076631|ref|YP_002334347.1| periplasmic serine protease [Thermosipho africanus TCF52B] gi|217036484|gb|ACJ75006.1| periplasmic serine protease [Thermosipho africanus TCF52B] Length = 291 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ELI I +++ +D LI+ +PGG A E I A++K K + V V Sbjct: 83 IEDSEELIRAI-KMTPNDMPIDLII--HTPGGLVLAAEQIANALKKHKGKVTVF--VPHY 137 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV E +++G I L QYP Sbjct: 138 AMSGGTLIALAADEIVMDENAVLGPIDPQLGQYP 171 >gi|145633615|ref|ZP_01789342.1| predicted inner membrane peptidase [Haemophilus influenzae 3655] gi|144985492|gb|EDJ92308.1| predicted inner membrane peptidase [Haemophilus influenzae 3655] Length = 223 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT-EVHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + + ++K + +T V ++AAS GY+++C ++ IV+A + Sbjct: 140 VLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFA 199 Query: 128 LVGSIGVLFQYPYVKPFLDK 147 ++GSIGV+ Q P V L K Sbjct: 200 VIGSIGVVAQIPNVHRLLKK 219 >gi|332557495|ref|ZP_08411817.1| Periplasmic serine protease [Rhodobacter sphaeroides WS8N] gi|332275207|gb|EGJ20522.1| Periplasmic serine protease [Rhodobacter sphaeroides WS8N] Length = 306 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E ++ ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 89 LAETLDHLAASEDAAAIVLEIDSPGGLVTGIEAAAEAIAAAAAVKPVHALVSPLAASAAY 148 Query: 113 LISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEV 170 ++ ++ IV ++ GSIGV L +V+P + G I + S +A+ P +E Sbjct: 149 WLASQASEIVMTPGAVAGSIGVALTTAAHVQPGAN--GAQIFEMSSRHARAKRPDASTEA 206 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSD-----GRIWTGAEAKKVG 222 +Q D ++++H VS R IP + L ++D G + EA + G Sbjct: 207 GRAELQRSLDEAEAAFHA---AVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 263 Query: 223 LIDVVGGQEEVWQSLYA 239 L D + ++ L A Sbjct: 264 LADRTETRAAFYERLTA 280 >gi|196019570|ref|XP_002119003.1| hypothetical protein TRIADDRAFT_62972 [Trichoplax adhaerens] gi|190577377|gb|EDV18511.1| hypothetical protein TRIADDRAFT_62972 [Trichoplax adhaerens] Length = 203 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 1/99 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCAS 118 +S ++ +++ L SPGG+ ++++ R +T V +AAS GY+++ + Sbjct: 105 LSVANNGDNVVLMLESPGGTVNGYGLATSELERLTARGLHLTVLVDRVAASGGYMMAVVA 164 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + I+AA ++VGSIGVL + P ++K G+ + + S Sbjct: 165 DRIIAAPFAIVGSIGVLTEIPNFNELMEKNGIKYEQITS 203 >gi|221641142|ref|YP_002527404.1| periplasmic serine protease [Rhodobacter sphaeroides KD131] gi|221161923|gb|ACM02903.1| Periplasmic serine protease [Rhodobacter sphaeroides KD131] Length = 305 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 15/203 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 88 LAETLAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAATLKPVHALVSPLAASAAY 147 Query: 113 LISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEV 170 ++ + IV ++ GSIGV L +V+P + G I + S +A+ P +E Sbjct: 148 WLASQATEIVMTPGAVAGSIGVALTAAAHVQPGTN--GAQIFEMSSRHARAKRPDASTEA 205 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSD-----GRIWTGAEAKKVG 222 +Q D ++++H VS R IP + L ++D G + EA + G Sbjct: 206 GRAELQRSLDEAEAAFHA---AVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 262 Query: 223 LIDVVGGQEEVWQSLYALGVDQS 245 L D + + L A V +S Sbjct: 263 LADRTETRAAFYARLTARTVPKS 285 >gi|58040764|ref|YP_192728.1| bacteriophage minor capsid protein C [Gluconobacter oxydans 621H] gi|58003178|gb|AAW62072.1| Bacteriophage minor capsid protein C [Gluconobacter oxydans 621H] Length = 265 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 2/179 (1%) Query: 63 DDSATALI-VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DD+A + I + ++SPGG+ I + + KP+ +++ A SA Y I+ A++ I Sbjct: 88 DDAAVSRIALMVNSPGGTVSECFDTAEMIYQARGEKPIWAILNDAAYSAAYAIASAADFI 147 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 + GSIG + + + LDK G+ + + + K + P + + A + Q Sbjct: 148 TVPQMGGTGSIGCVGMHVDITDALDKAGIKVTTFQYGARKTDGYPTTPMTDPARERAQAE 207 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +D +FV+ V+ +R I D G + G ++GL D + EE + L Sbjct: 208 IDEMGDFFVQTVARNRAISADVVRNTQAG-TYLGRHGVEIGLADEIATPEEAIAAFLKL 265 >gi|118361832|ref|XP_001014144.1| hypothetical protein TTHERM_00406670 [Tetrahymena thermophila] gi|89295911|gb|EAR93899.1| hypothetical protein TTHERM_00406670 [Tetrahymena thermophila SB210] Length = 279 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 18/178 (10%) Query: 64 DSATALIVSLSSPGGSAYA-GEAIFRAIQKV-KNRK-PVITEVHEMAASAGYLISCASNI 120 ++A AL++S S S+YA I + IQ KN K PV T E S GYLI CA Sbjct: 52 NAAVALVISADS---SSYAQAYNIIKQIQIFQKNTKIPVYTFGEEQVFSGGYLILCAGQK 108 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPM----KAEP-SPFSEVNPKA 174 TSLVG++GV + + ++ + K L +I +S + +A+ S E N + Sbjct: 109 SFVDNTSLVGNLGVNYTHTNIEKLVTKTLDFTINDFHTSDIAFSHRADSLSKQKEDNEEF 168 Query: 175 VQM----MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + +QD V ++ + + + Y L+ G I+ G +A + GL+D +G Sbjct: 169 FRQFNSHLQDQVIQTFEGLRKPKVKMQPELYQNDLL--QGEIYNGKKAVEYGLVDEIG 224 >gi|254361155|ref|ZP_04977299.1| S49 family endopeptidase [Mannheimia haemolytica PHL213] gi|153092646|gb|EDN73695.1| S49 family endopeptidase [Mannheimia haemolytica PHL213] Length = 204 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE-VHEMAASAGYLISCASNIIVAAETS 127 +++ L SPGG + +Q++++R +T V ++AAS GY+++C +N IV+A + Sbjct: 138 VLLKLESPGGVVHGYGLAASQLQRLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFA 197 Query: 128 LVGSIGV 134 ++GS+GV Sbjct: 198 VIGSVGV 204 >gi|157161458|ref|YP_001458776.1| S49 family peptidase [Escherichia coli HS] gi|157067138|gb|ABV06393.1| putative peptidase, S49 (protease IV) family [Escherichia coli HS] Length = 288 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D T + + + SPGG + I + +KP+ + E A SA Y I+ A++ I Sbjct: 109 DPDITGICLDIDSPGGEVAGCFDLVDVIYGARGKKPIHAILTESAYSAAYAIASAADRIS 168 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T+ VGS+GV+ + + G+ + + KAE +P E++ +A+ +Q + Sbjct: 169 VPRTAGVGSVGVITMHLDWTQRIKDDGLKVTIITYGSRKAEGAPLRELSDEALAAIQQDI 228 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ FV V+ +R I K + + + A+ ++GL D V + +++L Sbjct: 229 NTMGELFVNTVARNRGISA-KVIKSTQAACFMAADGVELGLADEVCPPDAAFRNL 282 >gi|53713622|ref|YP_099614.1| protease [Bacteroides fragilis YCH46] gi|52216487|dbj|BAD49080.1| probable protease [Bacteroides fragilis YCH46] Length = 345 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/172 (18%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY-LISCASNII 121 +D + +++ ++ PGG + + + I++ + KP++ + + ASA + +S + Sbjct: 158 NDRISGVVLFVNGPGGMITRVDVLEKLIRQ--SPKPIVAYITGVCASAHFWFVSACARRF 215 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ-MMQD 180 V++ +GS GV++ + K + ++G+ I+ + + + + K ++++ Sbjct: 216 VSSPMDEIGSCGVVYTFQSFKEYYAQMGIEIEDIYPDSADLKNRAYRDKEEKQDDTLIKE 275 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +H F + ++ + + YD L G+ + A G +D G E+ Sbjct: 276 NLSFYHHLFAQTIARNLGVKYDAQDPLFRGQTFFADTALAKGYVDAYGSLED 327 >gi|145591098|ref|YP_001153100.1| peptidase S49 [Pyrobaculum arsenaticum DSM 13514] gi|145282866|gb|ABP50448.1| peptidase S49 [Pyrobaculum arsenaticum DSM 13514] Length = 552 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 V D+SP + G I D L +R +D + L+++ SPGG+ A EA++ A+ Sbjct: 53 VLDSSP------VDGVIRDLVSLAQR-----KDVAGVVLVIN--SPGGTVSATEALYSAL 99 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + K + V+ +AAS Y ++ A+ I A +S VGSIGV+ + F D + Sbjct: 100 AGLNKTKYAV--VNGLAASGAYYVAMAAEKIYATPSSWVGSIGVVAVMWPDEYFYD---I 154 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + P+K ++ ++ + V + L + I D V Sbjct: 155 PDYVYTTGPLKYYGKELTDYYNDIERVRMNFVQAV------LRGRAGRIKADPQ-VFETA 207 Query: 211 RIWTGAEAKKVGLIDVVGG 229 I+T +A ++GL+D VGG Sbjct: 208 AIFTAEDALRLGLVDAVGG 226 >gi|171913527|ref|ZP_02928997.1| peptidase S49 [Verrucomicrobium spinosum DSM 4136] Length = 306 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 12/192 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVH 104 + D + I++ + +++ ++SPGG I A+++ K V T Sbjct: 116 LSDINGAMTAIQQAMKAKEIKTIVLDVASPGGQVTGIREIAAAVREATQVRGKTVYTFSD 175 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQY--PYVKPFLDKLGVSIKSVKSSPMKA 162 E ASA Y I ++ I +S VGSIG + P +K ++ L + + Sbjct: 176 ERIASAAYWIGSQADEIYVTPSSTVGSIGTYLAWLDPSMKMAMEGLRLEYFGAGTHKGMG 235 Query: 163 EPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 P P +E + K ++Q V+ WF VS +R D T+ G+ ++G EA K+ Sbjct: 236 LPGKPLTEADRK---LLQGKVEEINGWFKDGVSAARPKVADSTM---QGQTFSGEEAVKL 289 Query: 222 GLID-VVGGQEE 232 L D +VG EE Sbjct: 290 KLADGLVGSWEE 301 >gi|60681898|ref|YP_212042.1| putative proteinase [Bacteroides fragilis NCTC 9343] gi|60493332|emb|CAH08117.1| putative proteinase [Bacteroides fragilis NCTC 9343] Length = 286 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/172 (18%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY-LISCASNII 121 +D + +++ ++ PGG + + + I++ + KP++ + + ASA + +S + Sbjct: 99 NDRISGVVLFVNGPGGMITRVDVLEKLIRQ--SPKPIVAYITGVCASAHFWFVSACARRF 156 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ-MMQD 180 V++ +GS GV++ + K + ++G+ I+ + + + + K ++++ Sbjct: 157 VSSPMDEIGSCGVVYTFQSFKEYYAQMGIEIEDIYPDSADLKNRAYRDKEEKQDDTLIKE 216 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +H F + ++ + + YD L G+ + A G +D G E+ Sbjct: 217 NLSFYHHLFAQAIARNLGVKYDAQDPLFRGQTFFADTALAKGYVDAYGSLED 268 >gi|270667919|ref|ZP_06222488.1| protease IV [Haemophilus influenzae HK1212] gi|270316754|gb|EFA28517.1| protease IV [Haemophilus influenzae HK1212] Length = 259 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%) Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 A+ S FS + + Q ++ Y F+ +VS+ R + + L+ G++W G++A + Sbjct: 1 AKTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVDKLAQGQVWLGSDAFQN 60 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 GL+D +G E L + ++D++ WF D IS+LL DT Sbjct: 61 GLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNVSLISTLLRDT 111 >gi|265763947|ref|ZP_06092515.1| protease [Bacteroides sp. 2_1_16] gi|263256555|gb|EEZ27901.1| protease [Bacteroides sp. 2_1_16] Length = 345 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/172 (18%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY-LISCASNII 121 +D + +++ ++ PGG + + + I++ + KP++ + + ASA + +S + Sbjct: 158 NDRISGVVLFVNGPGGMITRVDVLEKLIRQ--SPKPIVAYITGVCASAHFWFVSACARRF 215 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ-MMQD 180 V++ +GS GV++ + K + ++G+ I+ + + + + K ++++ Sbjct: 216 VSSPMDEIGSCGVVYTFQSFKEYYAQMGIEIEDIYPDSADLKNRAYRDKEEKQDDTLIKE 275 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +H F + ++ + + YD L G+ + A G +D G E+ Sbjct: 276 NLSFYHHLFAQAIARNLGVKYDAQDPLFRGQTFFADTALAKGYVDAYGSLED 327 >gi|55379667|ref|YP_137517.1| proteinase IV-like [Haloarcula marismortui ATCC 43049] gi|55232392|gb|AAV47811.1| proteinase IV-like [Haloarcula marismortui ATCC 43049] Length = 308 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 3/129 (2%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRDDSATALI 70 V+ L+ VV ++ +S E + +VA + I I SQ+ ++++ + ++S A++ Sbjct: 21 VIAILIGAAVVPYA-ASVAEGDEQYVAVVNIDETISSSSSQDTVQKLRELRSNESVEAVV 79 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +SSPGGSA + E+++ A++++ KPV T V + AAS Y + S+ I SLVG Sbjct: 80 LRISSPGGSAASSESMYLAVKRLSAEKPVYTSVDQYAASGAYYTAVPSDRIYVTPASLVG 139 Query: 131 SIGVLFQYP 139 +GV+ P Sbjct: 140 HVGVIGTAP 148 >gi|298487181|ref|ZP_07005230.1| Peptidase, U7 family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158205|gb|EFH99276.1| Peptidase, U7 family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 121 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ L S GG ++ + +++ P+ + ++AAS GY+++C N I++A + Sbjct: 33 VVLRLESGGGMVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFA 92 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVS 151 ++GSIGV+ Q P V L K G + Sbjct: 93 ILGSIGVVAQLPNVNRLLKKHGTT 116 >gi|330877863|gb|EGH12012.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. race 4] Length = 149 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 +DKLGV ++ S KA PF Q Q V+D+++ F+ V + R + Sbjct: 12 MDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQFIASVKQGRGDRLKDK 71 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVG 228 L G IWTG +A +GL+D +G Sbjct: 72 DHPELFSGLIWTGEQAVALGLVDGLG 97 >gi|301022675|ref|ZP_07186530.1| peptidase, S49 family protein [Escherichia coli MS 196-1] gi|299881171|gb|EFI89382.1| peptidase, S49 family protein [Escherichia coli MS 196-1] Length = 222 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQF 220 >gi|219850369|ref|YP_002464802.1| hypothetical protein Cagg_3527 [Chloroflexus aggregans DSM 9485] gi|219544628|gb|ACL26366.1| protein of unknown function DUF114 [Chloroflexus aggregans DSM 9485] Length = 275 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 35/204 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I+ RD + + L +PGG A E I RA+++ + V V Sbjct: 67 IEDSEAVLRAIKMTDRD---IPIDLILHTPGGLVLASEQIARALRRHPAKVTVF--VPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV E +++G + L Q+P SI V E Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQHP---------AASILRV------LERK 166 Query: 166 PFSEVNPKAVQMMQDVVDSSY----HWFVRLVSESRNIPYDKTL--VLSDGRIWTG---- 215 P SE++ + + MM D+ + + H L+S+ ++ + + L+ G +WT Sbjct: 167 PISEIDDETL-MMADIAEKAIRQVKHTVCELLSDKMSVEKAEEVAHTLASG-VWTHDYPI 224 Query: 216 --AEAKKVGLIDVVGGQEEVWQSL 237 EA+++GL EE++Q + Sbjct: 225 TVREARELGLPISTDMPEEIYQMM 248 >gi|222825130|dbj|BAH22287.1| putative minor capsid protein c [Wolbachia endosymbiont of Cadra cautella] Length = 335 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 86/171 (50%), Gaps = 1/171 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E IE D S +++ + SPGG + I + + +K +I ++ A SA Y I Sbjct: 62 EEIESALEDKSIETILLDIDSPGGEVNGVFDLADFIYESRAKKRIIAIANDDAYSAAYAI 121 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I TS VGSIGV+ + F +K G+ +V + K + +P + ++ Sbjct: 122 ASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPITSES 181 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ ++ V+ Y V L++ +R++ + + ++ ++ G +A ++GL D Sbjct: 182 LENLKSEVNRLYGMLVELIARNRSLSVE-AIKNTEAGLYFGEKAIEMGLAD 231 >gi|323179198|gb|EFZ64768.1| head-tail preconnector protein GP5 domain protein [Escherichia coli 1180] Length = 225 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 56/115 (48%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 106 IVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 165 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F Sbjct: 166 LLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQF 220 >gi|239616994|ref|YP_002940316.1| protein of unknown function DUF114 [Kosmotoga olearia TBF 19.5.1] gi|239505825|gb|ACR79312.1| protein of unknown function DUF114 [Kosmotoga olearia TBF 19.5.1] Length = 280 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I +++ DD I+ +PGG A E I RA++K K + V V Sbjct: 72 IEDSEEVLRAI-KMTPDDMPIDFIIH--TPGGLVLAAEQIARALKKHKGKVTVF--VPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV E +++G + + QYP Sbjct: 127 AMSGGTLIAIAADEIVMDENAVLGPLDPQIGQYP 160 >gi|193064873|ref|ZP_03045950.1| putative peptidase, S49 (protease IV) family [Escherichia coli E22] gi|192927558|gb|EDV82175.1| putative peptidase, S49 (protease IV) family [Escherichia coli E22] Length = 288 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + + + + SPGG + I + +KP+ + E A SA Y I+ A++ I Sbjct: 109 DPDISGICLDIDSPGGEVAGCFDLVDVIYGSRGKKPIHAILTESAYSAAYAIASAADRIS 168 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T VGS+GV+ + + G+ + + KAE SP E++ +A+ +Q + Sbjct: 169 VPRTGGVGSVGVITMHLDWTQRIKDDGLKVTIITYGSRKAEGSPLRELSDEALAAIQQDI 228 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ FV V+ +R I K + + + A+ ++GL D V + +++L Sbjct: 229 NTMGELFVNTVARNRGISA-KVIKSTQAACFMAADGVEIGLADEVCPPDAAFKNL 282 >gi|83945138|ref|ZP_00957487.1| putative proteinase IV [Oceanicaulis alexandrii HTCC2633] gi|83851308|gb|EAP89164.1| putative proteinase IV [Oceanicaulis alexandrii HTCC2633] Length = 554 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 6/148 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++ + + + D+ A+++ +PGG A A +A+ R + + KP++ E+ Sbjct: 121 RDYVAAVRAANEDERVDAILLRFDTPGGYVAGCAEAAQAL-RNLNQSNGGKPLVGHADEL 179 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 ASAG ++ + + A++ ++VGS+GV + + L+K G KS +K SP Sbjct: 180 CASAGMKLAAQCDGLFASDGAMVGSVGVRIGFFDFEGALEKWGERYHVYKSGRLKDMGSP 239 Query: 167 FSEVNPKAVQMMQDVVDS-SYHWFVRLV 193 + + Q VD + ++V L Sbjct: 240 LRAPTDEESAIYQAEVDHLADRFYVELA 267 >gi|319411923|emb|CBQ73966.1| related to Signal peptide peptidase [Sporisorium reilianum] Length = 939 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 5/154 (3%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 ++++ + S GG + E+I+ A+++V+ KPV+ AAS GY + A++ I+A E Sbjct: 415 SIVLRIDSGGGDVVSSESIWDAVRRVREDYGKPVVASFGNAAASGGYYAASAADAILACE 474 Query: 126 TSLVGSIGVLFQYPYV-KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV P + + F D+ + I+S + S +++ +D Sbjct: 475 NTVTGSIGVASLRPTITRAFFDRFNIGIQSFFTG--STSQSTLHDLDEAQRAKSAKHIDE 532 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 Y F++ V + R+I D L+ GR+ TG A Sbjct: 533 MYGDFLQKVCDGRSISRDIIESLAGGRVMTGLSA 566 >gi|18313592|ref|NP_560259.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] gi|18161137|gb|AAL64441.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] Length = 548 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 22/183 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +LI + +++ +++ ++SPGG+ A EA++ + + K + V+ +AAS Sbjct: 58 KLISALIAVAQRGDVAGIVLLINSPGGTVSATEALYTTVAGINKTKYAV--VNGLAASGA 115 Query: 112 YLISCASNIIVAAETSLVGSIGVLF-----QYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ A+ I A +S VGSIGV+ +Y Y P D + + P+K Sbjct: 116 YYVAVATERIYATPSSWVGSIGVIAVMWPEEYFYDIP--DYI------YTTGPLKYYGRE 167 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ ++ + V + + S + V I+T +AK++GL+D Sbjct: 168 LTDYYNDIERVRLNFVQAVLKGRAGRIKASPD-------VFETASIFTADQAKELGLVDE 220 Query: 227 VGG 229 +GG Sbjct: 221 IGG 223 >gi|118382549|ref|XP_001024432.1| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila] gi|89306199|gb|EAS04187.1| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila SB210] Length = 184 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 10/150 (6%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T +M ++ LI + N + A + SL+G G +Q K L+ V + V + Sbjct: 6 PVYTFAEDMVLNSANLILSSGNKVFAGKYSLLGDFGYSYQGFGYKGLLENYNVKAEFVHA 65 Query: 158 SPMKAEPSPFSEVNPKAVQMMQD-VVDSSYHWFVRLVSESRNIPYDKTL--------VLS 208 K + +PF ++ + Q M++ +++S Y ++ +D L +L Sbjct: 66 GEKKVKLNPFQDLKQEDAQWMKNYLLESEYDLKSSVIQTRAQKFHDLKLSNEQVNKELLE 125 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 G I +AK++GLID + EE+ Y Sbjct: 126 KGMI-EAEQAKQIGLIDGIKTFEELAHEQY 154 >gi|186972970|pdb|3BPP|A Chain A, 1510-N Membrane Protease K138a Mutant Specific For A Stomatin Homolog From Pyrococcus Horikoshii Length = 230 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 8/101 (7%) Query: 43 IRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVI 100 I+GQI + + +R I+ D+A A+I+ L +PGG A +A+ +Q+++ K PVI Sbjct: 15 IKGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRA---DAMMNIVQRIQQSKIPVI 71 Query: 101 TEVH---EMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 V+ AASAG I+ S++I A + +G+ + Y Sbjct: 72 IYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY 112 >gi|237800698|ref|ZP_04589159.1| putative inner membrane peptidase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023557|gb|EGI03614.1| putative inner membrane peptidase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 218 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 33/50 (66%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 157 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKK 206 >gi|77465659|ref|YP_355162.1| periplasmic serine protease (ClpP class) [Rhodobacter sphaeroides 2.4.1] gi|77390077|gb|ABA81261.1| Periplasmic serine proteases (ClpP class) [Rhodobacter sphaeroides 2.4.1] Length = 305 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 88 LAETMAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAAAVKPVHALVSPLAASAAY 147 Query: 113 LISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEV 170 ++ ++ IV ++ GSIGV L +V+P + G I + S +A+ P +E Sbjct: 148 WLASQASEIVMTPGAVAGSIGVALTAAAHVQPGAN--GAQIFEMSSRHARAKRPDASTEA 205 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSD-----GRIWTGAEAKKVG 222 +Q D ++++H VS R IP + L ++D G + EA + G Sbjct: 206 GRAELQRSLDEAEAAFHA---AVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 262 Query: 223 LIDVVGGQEEVWQSLYA 239 L D + + + L A Sbjct: 263 LADRIETRAAFYARLAA 279 >gi|220920634|ref|YP_002495935.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219945240|gb|ACL55632.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 420 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 1/183 (0%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 ER D + + SPGG + + + KPV HE A SA Y I+ Sbjct: 102 FERGMADPEVRGIALICDSPGGEVAGNFDLVDVLYAARGAKPVRAFAHEGAYSAAYSIAS 161 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I+ + T VGSIGV+ + L + G+ + + + K + + + P+ Sbjct: 162 AADRIIVSRTGGVGSIGVVTAHIDASGALAQAGLKVTFIFAGEHKVDGNSAEPLPPEVKD 221 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +Q +D Y FV V+ +R++ + + + + EA + GL D VG ++ + Sbjct: 222 RIQARIDGLYDIFVAAVARNRSL-KETAVRATKALTYAADEAIRTGLADAVGALDDAVAA 280 Query: 237 LYA 239 A Sbjct: 281 FAA 283 >gi|114765597|ref|ZP_01444698.1| Periplasmic serine protease [Pelagibaca bermudensis HTCC2601] gi|114542046|gb|EAU45079.1| Periplasmic serine protease [Roseovarius sp. HTCC2601] Length = 457 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I+ + +KPV + A SA Y I+ ++ I+ + GSIGV+ + L+ G Sbjct: 146 IRALSAQKPVWAFISAHAFSAAYAIASQADRIIIPRSGGAGSIGVICMHADQSERLEANG 205 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQM-MQDVVDSSYHWFVRLVSESRNIPYD-KTLVL 207 V + + + K + +P+ E P+AV+ +Q + F V+E R + + Sbjct: 206 VRVTVISAGAHKGDGNPY-EPLPEAVREDLQRECEDLRQLFAETVAEGRGDRLTLEAALA 264 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ R + GA+A + GL D V ++ A Sbjct: 265 TEARTFIGAQAVEAGLADEVDNPRAAFERFVA 296 >gi|109157467|pdb|2DEO|A Chain A, 1510-N Membrane Protease Specific For A Stomatin Homolog From Pyrococcus Horikoshii gi|109157468|pdb|2DEO|B Chain B, 1510-N Membrane Protease Specific For A Stomatin Homolog From Pyrococcus Horikoshii Length = 230 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 43 IRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I+GQI + + +R I+ D+A A+I+ L +PGG A A I + IQ+ K PVI Sbjct: 15 IKGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRADAXXNIVQRIQQSK--IPVII 72 Query: 102 EVH---EMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 V+ AASAG I+ S++I A + +G+ + Y Sbjct: 73 YVYPPGASAASAGTYIALGSHLIAXAPGTSIGACRPILGY 112 >gi|197303368|ref|ZP_03168407.1| hypothetical protein RUMLAC_02090 [Ruminococcus lactaris ATCC 29176] gi|197297366|gb|EDY31927.1| hypothetical protein RUMLAC_02090 [Ruminococcus lactaris ATCC 29176] Length = 259 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 38/219 (17%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L+ R+ +D +++ L++ GG AG I I + KP ++ Sbjct: 72 EHLLPRLAEAEENDEIEGVLILLNTMGGDVEAGLGIAEMIASLG--KPTVS--------- 120 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +++ S+ G + V Y ++ P + I V+SS M F V Sbjct: 121 ---------LVLGGSHSIGGPLAVSADYSFIVPSGTMI---IHPVRSSGM------FIGV 162 Query: 171 --NPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSD-GRIWTGAEAKKVGLID 225 + + ++ QD + + + +S+ R + D T ++ D G + G EA + G+ID Sbjct: 163 IQSYRNMERTQDRI-TRFIASHSHISQERIVELMLDSTQLVKDVGTMLEGEEAVREGMID 221 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 VGG E +Q L+ L +D+ RK K P +++F D K Sbjct: 222 EVGGIHEAFQKLHEL-IDEERRKKKQEKP--DHFFDDTK 257 >gi|110668977|ref|YP_658788.1| protease IV; endopeptidase IV; signal peptide peptidase [Haloquadratum walsbyi DSM 16790] gi|109626724|emb|CAJ53191.1| Protease IV; endopeptidase IV; probable signal peptide peptidase [Haloquadratum walsbyi DSM 16790] Length = 305 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%) Query: 38 VARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 V+ I + G I S+ L E + +DS ++++ + S GG+ E ++ + + Sbjct: 47 VSVITVSGVITGSKVDTLSEDLREARINDSIKSVVLKVDSGGGAVAPSERLYLEVLRTAK 106 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV+ V ++AS Y +N + VGS+GV+ P D++ + Sbjct: 107 EIPVVASVQGVSASGAYYGILPANETFMLSSGQVGSVGVIGA-GGTAPVPDRI------I 159 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIW 213 ++ P KA+P+ + + V+S FV V E R NI + + ++ + + Sbjct: 160 RTGPDKAQPT---------TEQRRQQVESLKRQFVNRVVEHRGENITLSREEI-ANAKTY 209 Query: 214 TGAEAKKVGLIDVVG 228 G A + GLID +G Sbjct: 210 LGPRAAENGLIDQLG 224 >gi|294851554|ref|ZP_06792227.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294820143|gb|EFG37142.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 116 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 34/49 (69%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPG A Sbjct: 51 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGAPPSA 99 >gi|114766960|ref|ZP_01445880.1| Periplasmic serine protease [Pelagibaca bermudensis HTCC2601] gi|114540867|gb|EAU43929.1| Periplasmic serine protease [Roseovarius sp. HTCC2601] Length = 457 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I+ + +KPV + A SA Y I+ ++ I+ + GSIGV+ + L+ G Sbjct: 146 IRALSAQKPVWAFISAHAFSAAYAIASQADRIIIPRSGGAGSIGVICMHADQSERLEANG 205 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQM-MQDVVDSSYHWFVRLVSESRNIPYD-KTLVL 207 V + + + K + +P+ E P+AV+ +Q + F V+E R + + Sbjct: 206 VRVTVISAGAHKGDGNPY-EPLPEAVREDLQRECEDLRQLFAETVAEGRGDRLTLEAALA 264 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ R + GA+A + GL D V ++ A Sbjct: 265 TEARTFIGAQAVEAGLADEVDNPRAAFERFVA 296 >gi|254172897|ref|ZP_04879571.1| NfeD protein [Thermococcus sp. AM4] gi|214033053|gb|EEB73881.1| NfeD protein [Thermococcus sp. AM4] Length = 454 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 8/136 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSA 66 ++TR + +TL V+ F + N V G I S + R I+ ++A Sbjct: 3 MRTRTLRPLALTLLVLMFLPAVLASPNQKTVYVAKFEGVITSYSVDQFSRYIEIAEKNNA 62 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH---EMAASAGYLISCASNIIV 122 ALI+ + +PGGS G+A+ IQ++K PVI V+ +AASAG I+ S++I Sbjct: 63 EALIIEIDTPGGS---GQAMQEIIQRIKESTVPVIIYVYPPGAIAASAGTYIALGSHLIA 119 Query: 123 AAETSLVGSIGVLFQY 138 A ++ +G+ + Y Sbjct: 120 MAPSTSIGACEPILGY 135 >gi|149915902|ref|ZP_01904426.1| hypothetical protein RAZWK3B_07479 [Roseobacter sp. AzwK-3b] gi|149810225|gb|EDM70071.1| hypothetical protein RAZWK3B_07479 [Roseobacter sp. AzwK-3b] Length = 275 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 33/222 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +ED+Q +I I+ + T + + L +PGG A I RA++ + V ++ M Sbjct: 69 LEDAQSIISAIKATPAN---TPIDLVLHTPGGLVLAAMQIARAVETHPAKVTVFVPIYAM 125 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S G LI+ A++ IV E S++G I P + +G+S S+ ++ + P Sbjct: 126 --SGGTLIALAADEIVMGEFSMLGPID-----PQI------MGISAASIIAA---RDAKP 169 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSE------SRNIPYDKTLVLSDGR-----IWTG 215 V+ A+ ++ DV D + VR E R + L+ G T Sbjct: 170 IEHVSDVAL-VLADVSDKAIAQVVRGAVEIMTPRMERGKAEELAKTLASGTWTHDYALTP 228 Query: 216 AEAKKVGLIDVVGGQEEV--WQSLYALGVDQSIRKIKDWNPP 255 AEA+++GL VG E+ L+ V QS + ++PP Sbjct: 229 AEARELGLEVTVGMPSEILDLMKLFPAPVKQSAVEFLPFDPP 270 >gi|221638467|ref|YP_002524729.1| periplasmic serine protease [Rhodobacter sphaeroides KD131] gi|221159248|gb|ACM00228.1| Periplasmic serine protease [Rhodobacter sphaeroides KD131] Length = 304 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 19/197 (9%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 87 LAETLAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAAVVKPVHALVSPLAASAAY 146 Query: 113 LISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEV 170 ++ + IV ++ GSIGV L +V+P + G I + S +A+ P +E Sbjct: 147 WLASQATEIVMTPGAVAGSIGVALTAAAHVQPGAN--GAQIFEMSSRHARAKRPDASTEA 204 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSD-----GRIWTGAEAKKVG 222 +Q D ++++H VS R IP + L ++D G + EA + G Sbjct: 205 GRAELQRSLDEAEAAFHA---AVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 261 Query: 223 LIDVVGGQEEVWQSLYA 239 L D + E + YA Sbjct: 262 LAD----RTETRAAFYA 274 >gi|171186306|ref|YP_001795225.1| peptidase S49 [Thermoproteus neutrophilus V24Sta] gi|170935518|gb|ACB40779.1| peptidase S49 [Thermoproteus neutrophilus V24Sta] Length = 550 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ +++ + +S+ +I+ ++SPGG+ EA++ A++ + K + V + A Sbjct: 57 ETDRVVKALVELSQRRDVAGVILIINSPGGTVSGTEALYTALRGLNKTKYAV--VVGLGA 114 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y + A+ I AA +S VGSIGV+ + P L + P+K + Sbjct: 115 SGAYYTAVAAERIYAAPSSWVGSIGVV---AVIWPDLYLYDAGDYVYTTGPLKY----YG 167 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E + D V+ FV+ V E R I + + + G ++T EA ++GL+D Sbjct: 168 E----DLLSYYDDVEKIRQNFVKAVLEGRRGRIKANPAVFETAG-LFTAEEALRLGLVDK 222 Query: 227 VGG 229 VGG Sbjct: 223 VGG 225 >gi|240103959|ref|YP_002960268.1| Membrane bound protease, putative, nfeD/ClpP- family (nfeD) [Thermococcus gammatolerans EJ3] gi|239911513|gb|ACS34404.1| Membrane bound protease, putative, nfeD/ClpP- family (nfeD) [Thermococcus gammatolerans EJ3] Length = 454 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVH---EMAASAG 111 R I+ ++A ALI+ + +PGGS G+A+ IQ++K K PVI V+ +AASAG Sbjct: 52 RYIEIAEKNNAEALIIEIDTPGGS---GQAMQEIIQRIKESKVPVIIYVYPPGAIAASAG 108 Query: 112 YLISCASNIIVAAETSLVGS 131 I+ S++I A ++ +G+ Sbjct: 109 TYIALGSHLIAMAPSTSIGA 128 >gi|53803155|ref|YP_115065.1| prophage LambdaMc01, U7 family peptidase [Methylococcus capsulatus str. Bath] gi|53756916|gb|AAU91207.1| prophage LambdaMc01, peptidase, U7 family [Methylococcus capsulatus str. Bath] Length = 408 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 1/170 (0%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ + SPGG + + I+ KPV ++MA SA Y ++ A++ + + T Sbjct: 102 AILLDIDSPGGESGGVFDLADRIRAAAAVKPVWAVANDMAFSAAYALASAASKVFVSRTG 161 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 VGSIGV+ + K GV +V + K + +P ++ +A ++Q VD Y Sbjct: 162 GVGSIGVIAMHVDQSAKDAKDGVRYTAVFAGERKNDLNPHEPISDEAHALLQAEVDRVYR 221 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 FV V+ R + + + ++ ++ G +A GL D VG ++ L Sbjct: 222 LFVDTVARHRGLDA-RAIEATEAGLFFGQDAVTAGLADAVGTFDDALSQL 270 >gi|57640282|ref|YP_182760.1| membrane-bound serine protease, NfeD-like protein [Thermococcus kodakarensis KOD1] gi|57158606|dbj|BAD84536.1| predicted membrane-bound serine protease, NfeD homolog [Thermococcus kodakarensis KOD1] Length = 447 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 12/101 (11%) Query: 40 RIAIRGQIEDS--QELIERIE---RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 R+ G IE + Q +++ E R + +SA ALI+ L++PGG G+A+ + ++ Sbjct: 28 RVVYVGTIEGTITQYTVDQFESYIRTAEKNSAEALIIELNTPGGQ---GDAMMEIVSLIQ 84 Query: 95 NRK-PVITEVH---EMAASAGYLISCASNIIVAAETSLVGS 131 N PVI V+ +AASAG I+ AS++I A + +G+ Sbjct: 85 NSTVPVIIYVYPRGAIAASAGTYIAMASHLIAMAPGTSIGA 125 >gi|296536846|ref|ZP_06898893.1| serine peptidase [Roseomonas cervicalis ATCC 49957] gi|296262817|gb|EFH09395.1| serine peptidase [Roseomonas cervicalis ATCC 49957] Length = 294 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 5/180 (2%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A A+++ L+S GG + I + + KP+ + A SA Y ++ A + + Sbjct: 112 DTQAEAIVLDLNSGGGEVSGCFDLADTITQARGIKPIWGICGDCAYSAAYALASACDRVT 171 Query: 123 AAETSLVGSIGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP--FSEVNPKAVQMMQ 179 T VGS+GV+ Y K D+ G+++ V KAE + ++ + P+ +Q +Q Sbjct: 172 VPRTGGVGSVGVITMMVDYSKAITDE-GLAVHFVHYGARKAEETRQMYTGIKPELLQRVQ 230 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V FV LV+++R + D + + + G GL D V +E +++L A Sbjct: 231 QDVTMMGDIFVNLVAQNRRMSAD-AVKAQEADYFLGERGVAAGLADAVMAPDEAFRALLA 289 >gi|144898890|emb|CAM75754.1| Peptidase S49 [Magnetospirillum gryphiswaldense MSR-1] Length = 410 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 3/168 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNI 120 D A+++ + S GG + IQ ++++ KP+ E A SA Y I+C ++ Sbjct: 96 DPGVRAILLDVDSSGGEVGGLFDLVDHIQAIRSQCGKPIWAVADEAALSAAYAIACTADR 155 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I +T VGSIGV+ + + G++ V + K + +P ++ A +Q Sbjct: 156 IYVTQTGEVGSIGVVAVHRDESGADAQAGLAWTFVHAGAAKVDGNPHQPLSDSARAGLQA 215 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 VD+ Y FV LV+ R P + + ++ ++ G +A GL D VG Sbjct: 216 DVDALYGRFVALVARCRKQP-PEAIRATEAAVYRGDQAVAAGLADKVG 262 >gi|222100633|ref|YP_002535201.1| periplasmic serine protease [Thermotoga neapolitana DSM 4359] gi|221573023|gb|ACM23835.1| periplasmic serine protease [Thermotoga neapolitana DSM 4359] Length = 327 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I +++ +D LI+ +PGG A E I RA++K K + V V Sbjct: 115 IEDSEEVLRAI-KLTPEDMPIDLIIH--TPGGLVLAAEQIARALKKHKGKVTVF--VPHY 169 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ +V E +++G + Sbjct: 170 AMSGGTLIALAADEVVMDENAVLGPL 195 >gi|257091816|ref|YP_003165457.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044340|gb|ACV33528.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 130 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS Y I C+++ A VGSI V Y Y + F GV + + K Sbjct: 5 ANRLAASGSYWIGCSASEFYVAPGGEVGSIAVWQAYFDYSQAFAAG-GVKPTLISAGKYK 63 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 E +P + ++ +A +MQ VD Y F ++V+ R +P Sbjct: 64 VEGNPCAPLDEEAQGLMQSRVDDYYTSFTKVVARGRAVP 102 >gi|167761710|ref|ZP_02433837.1| hypothetical protein BACSTE_00044 [Bacteroides stercoris ATCC 43183] gi|167700436|gb|EDS17015.1| hypothetical protein BACSTE_00044 [Bacteroides stercoris ATCC 43183] Length = 305 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 6/174 (3%) Query: 64 DSA--TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DSA ++++ + S GG+ A + AI K++ + ++ ASA Y + + I Sbjct: 109 DSANISSVLCDIDSGGGAVDAIAPLVDAILYAKSKGKAVVAHCDLCASAAYYAASYCDEI 168 Query: 122 VAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +A+ T + GSIGV+ +P + + GV + ++ S+ + +PF ++ Sbjct: 169 IASNTISAEFGSIGVMMSFPDYAKYYENAGVKVHTIYSNLSDYKNAPFEAAKKGDYASIR 228 Query: 180 D-VVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 D +D F V ++R +T L GR++ +A KVGLID +G Q+ Sbjct: 229 DEELDPLARDFQANVRKNRGECLKQETEGLLRGRMFYAEDALKVGLIDSIGNQD 282 >gi|291278650|ref|YP_003495485.1| hypothetical protein DEFDS_0218 [Deferribacter desulfuricans SSM1] gi|290753352|dbj|BAI79729.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 271 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 29/203 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++DS+E++ I+ +D + + L +PGG A I RA++K K + V V Sbjct: 67 VDDSEEVLRAIQMTDKD---VPIDLILHTPGGLVLASLQIARALKKHKGK--VTVFVPHC 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPY--VKPFLDKLGVSIKSVKSSPMKAE 163 A S G LIS A++ IV +E +++G + L +YP + L++ V+ K+ M Sbjct: 122 AMSGGTLISLAADEIVMSENAVLGPVDPQLGEYPAASILKLLEQKDVNKIDDKTLIM--- 178 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AE 217 ++V KAV ++ V Y V E + + +LS G WT E Sbjct: 179 ----ADVAKKAVSQLESAV---YELLVDKYEEEKA--KELAHLLSTG-TWTHDYPITFEE 228 Query: 218 AKKVGLIDVVGGQEEVWQ--SLY 238 AKK+GL EEV Q SLY Sbjct: 229 AKKLGLNVSSDIPEEVMQLMSLY 251 >gi|312623544|ref|YP_004025157.1| hypothetical protein Calkro_2538 [Caldicellulosiruptor kronotskyensis 2002] gi|312204011|gb|ADQ47338.1| protein of unknown function DUF114 [Caldicellulosiruptor kronotskyensis 2002] Length = 269 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E+I I + D + L + L +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAI---NMTDPSIPLDIILHTPGGLVLAATQIARAIKRHKGK--VTVHVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV +E +++G + Sbjct: 122 AMSGGTLIALAADEIVMSEDAILGPV 147 >gi|147678370|ref|YP_001212585.1| periplasmic serine proteases [Pelotomaculum thermopropionicum SI] gi|146274467|dbj|BAF60216.1| Periplasmic serine proteases [Pelotomaculum thermopropionicum SI] Length = 288 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I R++ DD L+ L +PGG A E I RA+QK + V V Sbjct: 77 IEDSEAVLRAI-RLTPDDMPIDLV--LHTPGGLVLASEQIARALQKHPAK--VTVFVPHY 131 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G +I+ A++ IV E +++G + Sbjct: 132 AMSGGTMIALAADEIVMDENAVLGPV 157 >gi|312128757|ref|YP_003993631.1| hypothetical protein Calhy_2572 [Caldicellulosiruptor hydrothermalis 108] gi|311778776|gb|ADQ08262.1| protein of unknown function DUF114 [Caldicellulosiruptor hydrothermalis 108] Length = 270 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E+I I + D + L + L +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAI---NMTDPSIPLDIILHTPGGLVLASTQIARAIKRHKGK--VTVHVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV +E +++G + Sbjct: 122 AMSGGTLIALAADEIVMSEDAVLGPV 147 >gi|312876235|ref|ZP_07736222.1| protein of unknown function DUF114 [Caldicellulosiruptor lactoaceticus 6A] gi|311797050|gb|EFR13392.1| protein of unknown function DUF114 [Caldicellulosiruptor lactoaceticus 6A] Length = 269 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E+I I S D + L + L +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAI---SMTDPSVPLDIILHTPGGLVLASLQIARAIKRHKGK--VTVHVPHH 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV A +++G + Sbjct: 122 AMSGGTLIALAADEIVMAPDAVLGPV 147 >gi|309780992|ref|ZP_07675731.1| prophage LambdaMc01, peptidase, U7 family [Ralstonia sp. 5_7_47FAA] gi|330824611|ref|YP_004387914.1| peptidase S49 [Alicycliphilus denitrificans K601] gi|308920295|gb|EFP65953.1| prophage LambdaMc01, peptidase, U7 family [Ralstonia sp. 5_7_47FAA] gi|329309983|gb|AEB84398.1| peptidase S49 [Alicycliphilus denitrificans K601] Length = 413 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 5/172 (2%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ + SPGG + + I+ KPV ++MA SA Y ++ A+ + A T Sbjct: 102 AILLDIDSPGGESGGVFDLADRIRVASQVKPVWAVANDMAFSAAYALASAATRVFVARTG 161 Query: 128 LVGSIGVLFQY--PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 VGSIGV+ + VK D GV +V + K + +P ++ A +++ VD Sbjct: 162 GVGSIGVIAMHIDQSVKDAKD--GVRYTAVFAGERKNDLNPHEPLSDAAHAVLKAEVDRV 219 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Y FV V+ R + D G ++ G +A GL D VG ++ L Sbjct: 220 YELFVETVARHRGLDADAVRATEAG-LFFGPDAVATGLADAVGSLDDALTQL 270 >gi|218528332|ref|YP_002419148.1| peptidase S49 [Methylobacterium chloromethanicum CM4] gi|218520635|gb|ACK81220.1| peptidase S49 [Methylobacterium chloromethanicum CM4] Length = 299 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 4/121 (3%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ + SPGGS A+ I ++ RK V+ V AASA Y ++ A++ +V +T Sbjct: 117 AIMLLVDSPGGSPTGMNALADQIYAMRGRKRVLAHVSGAAASAAYWLATAASELVVEKTG 176 Query: 128 LVGSIGVLFQYP-YVKPFLDKLG-VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +VGSIGV+ V+P D G +SI+ V SS P P ++ ++ + D +++ Sbjct: 177 MVGSIGVVAAISKQVEP--DASGSLSIEIVSSSAPNKRPDPQTDDGAAEIRAILDGIEAQ 234 Query: 186 Y 186 + Sbjct: 235 F 235 >gi|145642067|ref|ZP_01797638.1| protease IV [Haemophilus influenzae R3021] gi|145273247|gb|EDK13122.1| protease IV [Haemophilus influenzae 22.4-21] Length = 295 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI + KN KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFKNAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRIL 247 >gi|85705188|ref|ZP_01036288.1| periplasmic serine protease [Roseovarius sp. 217] gi|85670510|gb|EAQ25371.1| periplasmic serine protease [Roseovarius sp. 217] Length = 274 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 33/222 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +ED+Q +I I+ RD T + + L +PGG A I RA++ + + ++ M Sbjct: 69 MEDAQSIISAIKATPRD---TPIDLVLHTPGGLVLAAMQIARAVEAHPAKVTIFVPIYAM 125 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S G LI+ A++ IV E S++G I P + +G+S S+ ++ + P Sbjct: 126 --SGGTLIALAADEIVMGEFSMLGPID-----PQI------MGISAASIVAA---RDSKP 169 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL------VLSDGR-----IWTG 215 V+ A+ ++ DV D + R E ++ L+ G T Sbjct: 170 VEHVSDIAL-VLADVSDKAIRQVKRGAVELMTPRLEQAKAEQLAETLASGTWTHDYALTA 228 Query: 216 AEAKKVGLIDVVGGQEEVWQ--SLYALGVDQSIRKIKDWNPP 255 EA +GL VG E+ + LY V QS + ++PP Sbjct: 229 TEAGGLGLPITVGLPPEILELMKLYPAPVKQSAVEFLPFDPP 270 >gi|323453936|gb|EGB09807.1| hypothetical protein AURANDRAFT_23965 [Aureococcus anophagefferens] Length = 259 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%) Query: 69 LIVSLSSPGGS----AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 L++ ++SPGGS A + R +++ V V +AAS GY+++ S+ +VAA Sbjct: 43 LVLRVTSPGGSVSDFGLAASLVLR-LRRTTGVG-VTAAVDVVAASGGYMLAVCSDRVVAA 100 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + VGS+GV+ P LD+ + + K +P +E +A +Q ++ Sbjct: 101 PFAFVGSVGVITMIPNFHRVLDREKIDFLQFTAGRYKRTVTPVTEATDEAKAKLQSELEE 160 Query: 185 SYHWFVRLVSESR 197 + F LV+ +R Sbjct: 161 IHGAFKDLVATNR 173 >gi|83951435|ref|ZP_00960167.1| Periplasmic serine protease (ClpP class) [Roseovarius nubinhibens ISM] gi|83836441|gb|EAP75738.1| Periplasmic serine protease (ClpP class) [Roseovarius nubinhibens ISM] Length = 309 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%) Query: 35 SPHVARIAIRGQIEDSQELIER-------------IERISRDDSATALIVSLSSPGGSAY 81 S VA + IRG + E++ER I+ ++ +A ++ ++SPGG Sbjct: 58 SRRVAVMPIRGILTPDSEVLERYFGWATYQGIEAACAEIAANEDVSAAVLDVNSPGGMVM 117 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY- 140 E +A+ + KPV V+ MAASA Y I+ ++ I S +GSIG + + Sbjct: 118 GLEGAAQAVAALAAIKPVHVLVNPMAASAAYFIASQASDITMIPGSELGSIGTMRSSVWP 177 Query: 141 VKP--FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 VKP + D+ GV + S + P+P SE +Q D +++ F+ V+ R Sbjct: 178 VKPDNWGDQWGVHLSSHARA---KNPNPTSETGLAEIQRSLDEAEAA---FLDAVATGRG 231 Query: 199 I 199 + Sbjct: 232 L 232 >gi|167948600|ref|ZP_02535674.1| peptidase S49 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 141 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 8/113 (7%) Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLV 206 G+ + + + K PFS VN + +Q ++D + F+ V + R + D+ Sbjct: 7 GIERRLMTAGEHKGILDPFSPVNDYEREHIQRMLDQLHAQFIETVKQGRGERLKVDEYPE 66 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G W+G E K+GL+D G V + + +G + I D+ P ++ W Sbjct: 67 LFSGLFWSGEEGLKIGLVDAFGSSSYVAREV--IGAED----IVDFTPEEDIW 113 >gi|309811144|ref|ZP_07704940.1| endopeptidase Clp [Dermacoccus sp. Ellin185] gi|308434874|gb|EFP58710.1| endopeptidase Clp [Dermacoccus sp. Ellin185] Length = 209 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 71/183 (38%), Gaps = 47/183 (25%) Query: 62 RDDSATALIVSL----------------SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 RDD+A A+ L +SPGGS AG AIF +Q V N V T Sbjct: 33 RDDNANAICAQLLLLAAEDPEKDIWLYINSPGGSVTAGMAIFDTMQWVPN--DVCTVAMG 90 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 +AAS G + A G+ G + P+ + + + P+ Sbjct: 91 LAASMGQFLLSA------------GAKGKRYATPHARIMMHQ-----------PLGGIQG 127 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 S+V +A Q++ L++E P +K SD W T AEAK+ G + Sbjct: 128 TASDVKTQAEQLLH-----IKKQMAELIAEHTGQPVEKISADSDRDRWFTAAEAKEYGFV 182 Query: 225 DVV 227 D V Sbjct: 183 DHV 185 >gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus elongatus PCC 6301] gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus elongatus PCC 7942] gi|18203213|sp|Q9L4P3|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|67460443|sp|Q5N1Q7|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus elongatus PCC 7942] gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus elongatus PCC 6301] gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus elongatus PCC 7942] Length = 199 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%) Query: 34 NSPHVARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 N + RI GQ + D + ++ ++ + +DS+ + + ++SPGGS AG AI+ + Sbjct: 25 NRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTM 84 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASN 119 Q +K+ PVIT +AAS G + CA + Sbjct: 85 QYIKS--PVITICLGLAASMGAFLLCAGS 111 >gi|313680148|ref|YP_004057887.1| ATP-dependent clp protease proteolytic subunit clpp [Oceanithermus profundus DSM 14977] gi|313152863|gb|ADR36714.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oceanithermus profundus DSM 14977] Length = 194 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 31/161 (19%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG YAG AI+ +Q VK+ PV T V MAAS G + A G Sbjct: 63 INSPGGDVYAGLAIYDTMQYVKS--PVATIVVGMAASMGAFLLAA------------GEA 108 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G + P+ + + + P +++ +A Q+++ S L Sbjct: 109 GQRYALPHARVMIHQ-----------PWGGAQGQATDIAIQAEQILK-----SKKLLNEL 152 Query: 193 VSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE 232 +++ P +K SD W T EA+ GL+D V +E+ Sbjct: 153 LAKHTGQPVEKVEADSDRDFWMTADEARDYGLVDRVIARED 193 >gi|312794671|ref|YP_004027594.1| hypothetical protein Calkr_2556 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181811|gb|ADQ41981.1| protein of unknown function DUF114 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 269 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E+I I S DS+ L + L +PGG A I RAI++ + V V Sbjct: 67 INDSEEVIRAI---SMTDSSVPLDIILHTPGGLVLASLQIARAIKRHTGK--VTVHVPHH 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV A +++G + Sbjct: 122 AMSGGTLIALAADEIVMAPDAVLGPV 147 >gi|6723247|dbj|BAA89643.1| gp18 [Wolbachia phage WO] Length = 350 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 82/159 (51%), Gaps = 1/159 (0%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + SPGG + I +++K +I ++ A SA Y I+ ++ I TS Sbjct: 93 ILLDIDSPGGEVNGIFDLADFIYNARSKKRIIAIANDDAYSAAYAIASSAEKIFLTRTSG 152 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV+ + F +K G+ ++ + K + +P + ++++ ++ V+ Y Sbjct: 153 VGSIGVIASHIDQSGFDEKQGIKYSTIFAGSRKNDLNPHEPITSESLENLKSEVNRLYGM 212 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 V L++ +R++ + + ++ ++ G +A ++GL D V Sbjct: 213 LVELIARNRSLSIE-AIKSTEAGLYFGEKAVEIGLADGV 250 >gi|134297328|ref|YP_001121063.1| peptidase S49 [Burkholderia vietnamiensis G4] gi|134140485|gb|ABO56228.1| protein C, Serine peptidase, MEROPS family S49 [Burkholderia vietnamiensis G4] Length = 412 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 1/163 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + +++ + SPGG A + R +++V KPV ++ A SA Y I+ ++ + Sbjct: 97 DPQVSGILLDIDSPGGEASGSFELARRVREVAAMKPVWAVANDAAYSAAYAIAASAQRLF 156 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 ET VGSIGV+ + K G ++ + K + SP ++ A +Q V Sbjct: 157 VTETGGVGSIGVIALHVDQSVKDAKDGYRFTAITAGAHKNDYSPHEPLSDAAKTELQGEV 216 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 D Y F V+ R++ D G ++ G+ A GL D Sbjct: 217 DRLYSIFTEHVAAMRDLDVDAVRATEAG-LFFGSNAVAQGLAD 258 >gi|83589919|ref|YP_429928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella thermoacetica ATCC 39073] gi|83572833|gb|ABC19385.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella thermoacetica ATCC 39073] Length = 259 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 35/184 (19%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + +D S L+V L++ GG AG AI + V KPV++ V S Sbjct: 83 EHIIPQLVAVEQDPSIKGLLVVLNTVGGDVEAGLAIAEML--VSMSKPVVSLVLGGGHSI 140 Query: 111 GYLISCASNIIVAAETSL-----VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G IS A+N AET+ + G++ P +LDK+ Sbjct: 141 GVPISVAANYSFIAETATMTIHPIRLTGLVIGVPQTYEYLDKM----------------- 183 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ + + + S RL+ ++ + D G I G +A +VGLID Sbjct: 184 -----QDRVIRFIVEHANISEQELRRLMFQTGELARDI------GTILVGQDAVRVGLID 232 Query: 226 VVGG 229 VGG Sbjct: 233 EVGG 236 >gi|298207459|ref|YP_003715638.1| ATP-dependent Clp protease proteolytic subunit 2 [Croceibacter atlanticus HTCC2559] gi|83850095|gb|EAP87963.1| ATP-dependent Clp protease proteolytic subunit 2 [Croceibacter atlanticus HTCC2559] Length = 224 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D+ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DANKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCA------ 137 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G+ G P+ + + + P+ S++ A +++ Sbjct: 138 ------GAEGKRSGLPHSRVMIHQ-----------PLGGAQGQASDIEITAREIL----- 175 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDVV 227 + +++S+ PYDK SD W A+ AK+ G+ID V Sbjct: 176 TLKEELYKIISKHSGQPYDKVYEDSDRDYWMKADKAKEYGMIDEV 220 >gi|145629712|ref|ZP_01785508.1| protease IV [Haemophilus influenzae 22.1-21] gi|144978049|gb|EDJ87828.1| protease IV [Haemophilus influenzae 22.1-21] Length = 304 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 20/192 (10%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI K+ KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-----VLSDGRIWTG---A 216 F ++++ +A MQ + ++ +V VSE+RNI D L LSD + G A Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNVLPNAKQYLSDLKALKGNSTA 266 Query: 217 EAKKVGLI-DVV 227 A++ GL+ DVV Sbjct: 267 YAQQRGLVTDVV 278 >gi|308231618|ref|ZP_07663896.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu001] gi|308369980|ref|ZP_07666835.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu002] gi|308216724|gb|EFO76123.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu001] gi|308325734|gb|EFP14585.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu002] Length = 313 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 15/220 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ + I R + D LI + P A A + + AI KP + + Sbjct: 67 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAVQELREAIAAFSAVKPSLAWAETYPGTL 126 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 Y ++ A + + VG +G +++ L K G+ + V K+ + F+E Sbjct: 127 SYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTED 186 Query: 170 ----VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +AV M D + W + V++SRNI D L+D +A GLID Sbjct: 187 GFTDAHREAVTRMLDSLQDQV-W--QAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 243 Query: 226 VVGGQEEVWQSLYAL-GVDQ------SIRKIKDWNPPKNY 258 +G +++ + + L GV++ + D PP+ Y Sbjct: 244 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMY 283 >gi|145510482|ref|XP_001441174.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408413|emb|CAK73777.1| unnamed protein product [Paramecium tetraurelia] Length = 248 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 38 VARIAIRGQIEDSQ--ELIERIERISRDDS-ATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V+ ++GQI S ++ + +++ ++S A ALI++ S GGS I R +V+ Sbjct: 18 VSFFCLQGQITSSMTYKVYKALKKFHPENSKAIALIIN--STGGSLAHAHIIQRKFDQVR 75 Query: 95 NRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + P+ T + A S + + C + I +TS+VG++G Q + + + + Sbjct: 76 KKHNIPLYTFAEDYALSGAFYLLCMGDKIFCNKTSIVGAVGTQIQTLNILNLFEHYNLEV 135 Query: 153 KSVKSSPMKA---EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 ++ S + + P S N + +++++ + +S+ +K VL+ Sbjct: 136 RTFNSGSNETFLQQLDPLS--NNTSTNILENISEQQNQQLQLQISQMIGNRQNKEQVLT- 192 Query: 210 GRIWTGAEA-KKVGLIDVVG 228 G I+ G + + ID +G Sbjct: 193 GSIFNGQQLFEDYKFIDGIG 212 >gi|330946658|gb|EGH47631.1| putative inner membrane peptidase [Pseudomonas syringae pv. pisi str. 1704B] Length = 165 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 2/115 (1%) Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 N I++A +++GSIGV+ Q P V L K + + + + K + F E K + Sbjct: 2 GNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREK 61 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q +D ++ F V+ R P ++ G +W G A L+D + +E Sbjct: 62 FQQDLDITHDLFKNFVASYR--PQLSIDEVATGEVWLGMAAVDKLLVDELKTSDE 114 >gi|312136185|ref|YP_004003523.1| hypothetical protein Calow_2220 [Caldicellulosiruptor owensensis OL] gi|311776236|gb|ADQ05723.1| protein of unknown function DUF114 [Caldicellulosiruptor owensensis OL] Length = 269 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E+I I + D + L + L +PGG A I RAI++ K++ V + Sbjct: 67 INDSEEVIRAI---NMTDPSIPLDIILHTPGGLVLASLQIARAIKRHKSK--VTVHIPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV E +++G + Sbjct: 122 AMSGGTLIALAADEIVMCEDAVLGPV 147 >gi|17545577|ref|NP_518979.1| bacteriophage-like protein [Ralstonia solanacearum GMI1000] gi|17427870|emb|CAD14560.1| probable bacteriophage-related protein [Ralstonia solanacearum GMI1000] Length = 416 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 1/185 (0%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 E+++ D A+++ + SPGG + + I+ KPV ++MA SA Y + Sbjct: 89 EQLDAALADPGIAAILLDVDSPGGESGGVFDLADRIRVAAAIKPVWAAANDMAFSAAYAL 148 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 +CA++ + + T VGSIGV+ + K GV +V + K + +P + +A Sbjct: 149 ACAASRVFVSRTGGVGSIGVIAMHVDQSVKDAKDGVRYTAVFAGARKNDLNPHEPITDEA 208 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +Q V Y FV V R + + G ++ G +A GL D VG ++ Sbjct: 209 QAQLQAEVSRIYRLFVATVGSYRGLSAEAVTATEAG-LFFGQDAVAAGLADAVGTFDDAL 267 Query: 235 QSLYA 239 L A Sbjct: 268 AQLTA 272 >gi|104641333|gb|ABF73019.1| plastid periplasmic serine protease IV protein precursor [Karenia brevis] Length = 461 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 27/45 (60%) Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 SY F + SR + + T ++ GR+WTG +AK GL+D +GG Sbjct: 319 SYTLFRDTAALSRGLAINATEAVAQGRVWTGRQAKGAGLVDALGG 363 >gi|77462189|ref|YP_351693.1| peptidase [Rhodobacter sphaeroides 2.4.1] gi|77386607|gb|ABA77792.1| probable peptidase [Rhodobacter sphaeroides 2.4.1] Length = 319 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 19/197 (9%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 102 LAETLAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIATAAAVKPVHALVSPLAASAAY 161 Query: 113 LISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEV 170 ++ ++ IV ++ GSIG+ L +V+P + G I + S +A+ P +E Sbjct: 162 WLASQASEIVMTPGAVAGSIGIALTAAAHVQPGAN--GAQIFEMSSRHARAKRPDASTEA 219 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSD-----GRIWTGAEAKKVG 222 +Q D ++++H VS R IP + L ++D G + A + G Sbjct: 220 GRAELQRSLDEAEAAFHA---AVSTGRAIPAAELAARLSVTDDPQDGGATFRAPAAIRRG 276 Query: 223 LIDVVGGQEEVWQSLYA 239 L D + E + YA Sbjct: 277 LAD----RSETRAAFYA 289 >gi|302872874|ref|YP_003841510.1| hypothetical protein COB47_2288 [Caldicellulosiruptor obsidiansis OB47] gi|302575733|gb|ADL43524.1| protein of unknown function DUF114 [Caldicellulosiruptor obsidiansis OB47] Length = 269 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E++ I + D + L + L +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVVRAI---NMTDPSIPLDIILHTPGGLVLASLQIARAIKRHKGK--VTVHVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV E +++G + Sbjct: 122 AMSGGTLIALAADEIVMCEDAVLGPV 147 >gi|146163651|ref|XP_001012050.2| hypothetical protein TTHERM_00984990 [Tetrahymena thermophila] gi|146145966|gb|EAR91805.2| hypothetical protein TTHERM_00984990 [Tetrahymena thermophila SB210] Length = 332 Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 14/165 (8%) Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 EA+ +A +K+ R P+ T + A YL+ + A S++GSI Y + Sbjct: 72 EALRQASEKL--RAPLYTFSEDQALGDSYLLLSLGETVTANPFSIIGSINSRINYISFEK 129 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 ++LG+ SS PS + P +Q+ + L+ + R ++ Sbjct: 130 LFERLGIKYDIYTSSSPAFLPS--RKPTPSDIQLAEQSNQEVLESIQNLILQKRGKHFEN 187 Query: 203 --------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 K +LS G+ +T +A K GLID +G E S+Y+ Sbjct: 188 KGISREQAKKEILS-GQTFTAQQALKNGLIDQIGTFYEFKDSMYS 231 >gi|312114779|ref|YP_004012375.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] gi|311219908|gb|ADP71276.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] Length = 285 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 5/173 (2%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ + S GG A + I+K++ + KP+ +E AASA Y I+CA+ + A Sbjct: 109 GVILEIDSYGGEAGGVFDLADFIRKIQRQTGKPIYAHANENAASAAYAIACAAEKVWVAR 168 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T VGSIGV+ + +K G+ + + K +P + +A +Q VD Sbjct: 169 TGEVGSIGVICAHLDQSQADEKAGLRWTFISAGERKTWGNPHEPLGDEARARVQADVDWL 228 Query: 186 YHWFVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Y FV+ V+ R + P D +D ++ G +A VGL D G +E + L Sbjct: 229 YDEFVKTVARYRGMRPADIRATKAD--VFRGEDAVGVGLADASGTLDECFDVL 279 >gi|163796778|ref|ZP_02190736.1| Periplasmic serine protease [alpha proteobacterium BAL199] gi|159178032|gb|EDP62579.1| Periplasmic serine protease [alpha proteobacterium BAL199] Length = 425 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 14/203 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-----NRKPVITEVHEM 106 ++ +++E + +++ L +PGG A +F ++ + KP+ E Sbjct: 85 DIGDKVEAVLSSADVRGVLLELDTPGGEAGG---VFDLADRLSELQRASGKPIWAIADEA 141 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A SAGY I+ + I T+ VGSIGV+ + + G++ V + K + SP Sbjct: 142 ALSAGYAIASVAEQIWLTRTAEVGSIGVVAVHVDQSAADRQAGLAYSFVHAGAHKIDGSP 201 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRIWTGAEAKKVGLI 224 ++ A +Q VD+ FV LV+ +R I +V+ ++ + G A GL Sbjct: 202 HLPLSDSARARIQADVDALNDAFVDLVARNRGI---TAIVIRQTEAATFRGERAVAAGLA 258 Query: 225 DVVGGQEEVWQSLYA-LGVDQSI 246 D +G + V + LG +SI Sbjct: 259 DRIGNFDAVLTAFAERLGRPRSI 281 >gi|145631779|ref|ZP_01787539.1| protease IV [Haemophilus influenzae R3021] gi|144982569|gb|EDJ90119.1| protease IV [Haemophilus influenzae R3021] Length = 329 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G A + I AI + KN KPVI + Sbjct: 91 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFKNAGKPVIAYADNYSQG 150 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL S A I + + +GS+ G+ + Y K LDKL V+ + K+ P Sbjct: 151 QYYLASFADEIYLNS----IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 206 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 F ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 207 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNIL 247 >gi|99034762|ref|ZP_01314688.1| hypothetical protein Wendoof_01000499 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 199 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 68/133 (51%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IE+ D+ +I+ + SPGG + I + + K ++ ++ A SA Sbjct: 65 EKIREEIEKALIDEEVETIILDIDSPGGEVNGLFDLSDFIYEARGLKKIVAIANDDAYSA 124 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ ++ TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 125 AYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGKRKNDLNPHEPI 184 Query: 171 NPKAVQMMQDVVD 183 ++V+ +QD VD Sbjct: 185 TSESVESLQDEVD 197 >gi|118575572|ref|YP_875315.1| periplasmic serine protease (ClpP class) [Cenarchaeum symbiosum A] gi|118194093|gb|ABK77011.1| periplasmic serine protease (ClpP class) [Cenarchaeum symbiosum A] Length = 308 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A L + L SPGGS A EAI + ++ VI + A SA +ISCASN IV + Sbjct: 78 AKELDLVLHSPGGSPEAAEAIVLYLHEIFEDIRVI--IPHAAMSAATMISCASNYIVMGK 135 Query: 126 TSLVG 130 S +G Sbjct: 136 HSFLG 140 >gi|194333703|ref|YP_002015563.1| hypothetical protein Paes_0871 [Prosthecochloris aestuarii DSM 271] gi|194311521|gb|ACF45916.1| protein of unknown function DUF107 [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 6/122 (4%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERIS 61 FV+KKI + ++ L+V H ++ + I+++G I S + +R ++ Sbjct: 2 FVIKKISVFIFTVFVLFLSVTVTHKDVHGDNGQSVLYTISLQGSINPGSADFFDRAVSLA 61 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCAS 118 DSA A++V L +PGG + + R I + + PVI V AASAG L++ AS Sbjct: 62 IADSAHAVLVELDTPGGLVTSLRQMVRRI--MASSVPVIVYVAPRGAQAASAGALLTLAS 119 Query: 119 NI 120 ++ Sbjct: 120 HV 121 >gi|170287818|ref|YP_001738056.1| hypothetical protein TRQ2_0011 [Thermotoga sp. RQ2] gi|170175321|gb|ACB08373.1| protein of unknown function DUF114 [Thermotoga sp. RQ2] Length = 284 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I +++ D LI L +PGG A E I RA++ K + V V Sbjct: 72 IEDSEEILRAI-KLTPSDMPIDLI--LHTPGGLVLAAEQIARALKMHKGK--VTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ I+ E +++G + Sbjct: 127 AMSGGTLIALAADEIIMDENAVLGPL 152 >gi|328542278|ref|YP_004302387.1| Periplasmic serine protease [polymorphum gilvum SL003B-26A1] gi|326412027|gb|ADZ69090.1| Periplasmic serine protease [Polymorphum gilvum SL003B-26A1] Length = 280 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + DS+E++ I+ D L + L +PGG A I RAIQ K + V V Sbjct: 67 VNDSEEVLRAIQMT---DDEVPLDIVLHTPGGLVLAATQIARAIQGHKGKVTVF--VPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV E S++G + Sbjct: 122 AMSGGTLIALAADEIVMCEHSVLGPV 147 >gi|207725418|ref|YP_002255814.1| bacteriophage-related protein [Ralstonia solanacearum MolK2] gi|206590654|emb|CAQ37616.1| bacteriophage-related protein [Ralstonia solanacearum MolK2] Length = 416 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 5/187 (2%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 ++++ D A+++ + SPGG + + I+ KPV ++MA SA Y + Sbjct: 89 DQLDAALADPGVAAILLDVDSPGGESGGAFDLADRIRAAAAVKPVWAVANDMAFSAAYAL 148 Query: 115 SCASNIIVAAETSLVGSIGVLFQY--PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 + A++ + + T VGSIGV+ + VK D G+ +V + K + +P ++ Sbjct: 149 ASAASRLFVSRTGGVGSIGVIAMHVDQSVKDAQD--GIRYTAVFAGARKNDLNPHEPISD 206 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 A +Q VD Y FV V+ +R I + G ++ G +A GL D VG ++ Sbjct: 207 AAQAQLQAEVDRLYGLFVATVANNRGIAAEAVTATEAG-LFFGQDAVAAGLADDVGTFDD 265 Query: 233 VWQSLYA 239 L A Sbjct: 266 ALAQLTA 272 >gi|148269156|ref|YP_001243616.1| hypothetical protein Tpet_0011 [Thermotoga petrophila RKU-1] gi|281411454|ref|YP_003345533.1| protein of unknown function DUF114 [Thermotoga naphthophila RKU-10] gi|147734700|gb|ABQ46040.1| protein of unknown function DUF114 [Thermotoga petrophila RKU-1] gi|281372557|gb|ADA66119.1| protein of unknown function DUF114 [Thermotoga naphthophila RKU-10] Length = 284 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I +++ D LI L +PGG A E I RA++ K + V V Sbjct: 72 IEDSEEILRAI-KLTPSDMPIDLI--LHTPGGLVLAAEQIARALKMHKGK--VTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ I+ E +++G + Sbjct: 127 AMSGGTLIALAADEIIMDENAVLGPL 152 >gi|288931153|ref|YP_003435213.1| hypothetical protein Ferp_0768 [Ferroglobus placidus DSM 10642] gi|288893401|gb|ADC64938.1| protein of unknown function DUF107 [Ferroglobus placidus DSM 10642] Length = 424 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 6/101 (5%) Query: 35 SPHVARIAIRGQIEDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 + V + I G I + + IER +I+ +++A A++++L +PGG + E I I + Sbjct: 18 ASKVVEVRIEGAINEGTVIKIERAFKIAEEENADAILITLDTPGGLVKSTEKIVSMI--L 75 Query: 94 KNRKPVITEVH---EMAASAGYLISCASNIIVAAETSLVGS 131 ++ PV+T V+ +ASAG +I A ++ +E + VG+ Sbjct: 76 SSKIPVVTYVYPQGAFSASAGSIILIAGHVAAMSEGTSVGA 116 >gi|315230791|ref|YP_004071227.1| membrane-bound ClpP-class protease [Thermococcus barophilus MP] gi|315183819|gb|ADT84004.1| membrane-bound ClpP-class protease [Thermococcus barophilus MP] Length = 449 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 8/94 (8%) Query: 43 IRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVI 100 I+GQI + + +R + +A A+I+ L +PGG G+A+ IQ+++ K PVI Sbjct: 29 IKGQITSYTYDQFDRYISEAERANANAIIIELDTPGGR---GDAMQNIIQRIQTAKVPVI 85 Query: 101 TEVH---EMAASAGYLISCASNIIVAAETSLVGS 131 V+ MAASAG I+ S++I A + +G+ Sbjct: 86 IYVYPSGAMAASAGTYIALGSHLIAMAPGTGIGA 119 >gi|15643678|ref|NP_228724.1| hypothetical protein TM0916 [Thermotoga maritima MSB8] gi|4981452|gb|AAD35997.1|AE001755_20 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 284 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I +++ D LI L +PGG A E I RA++ K + V V Sbjct: 72 IEDSEEILRAI-KLTPSDMPIDLI--LHTPGGLVLAAEQIARALKMHKGK--VTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ I+ E +++G + Sbjct: 127 AMSGGTLIALAADEIIMDENAVLGPL 152 >gi|163796636|ref|ZP_02190595.1| Periplasmic serine protease [alpha proteobacterium BAL199] gi|159178196|gb|EDP62741.1| Periplasmic serine protease [alpha proteobacterium BAL199] Length = 425 Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVK-----NRKPVITEVHEMAASAGYLISCASNIIVA 123 +++ L +PGG A +F ++ + KP+ E A SAGY I+ + I Sbjct: 102 VLLELDTPGGEAGG---VFDLADRLSELQRASGKPIWAIADEAALSAGYAIASVAEQIWL 158 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 T+ VGSIGV+ + + G++ V + K + SP ++ A +Q VD Sbjct: 159 TRTAEVGSIGVVAVHVDQSAADRQAGLAYSFVHAGAHKIDGSPHLPLSDSARARIQADVD 218 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + FV LV+ +R + D + ++ + G A GL D VG Sbjct: 219 ALNDAFVDLVARNRGLAAD-AVRRTEAATFRGERAVVAGLADWVG 262 >gi|332981228|ref|YP_004462669.1| hypothetical protein Mahau_0644 [Mahella australiensis 50-1 BON] gi|332698906|gb|AEE95847.1| hypothetical protein Mahau_0644 [Mahella australiensis 50-1 BON] Length = 275 Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ +I I+ ++ D LI L +PGG A A I RA++K + V V Sbjct: 66 IDDSERVIRAIQ-MTDPDLPIDLI--LHTPGGVALAAVQIARALKKHPGKTTVY--VPHY 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV E S++G + + QYP Sbjct: 121 AMSGGTLIALAADEIVMGEQSVLGPVDPQIGQYP 154 >gi|291298892|ref|YP_003510170.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728] gi|290568112|gb|ADD41077.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728] Length = 207 Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 31/169 (18%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 ++ DD + + ++SPGGS Y G AI+ +Q + N V T MAAS G L+ CA Sbjct: 54 LAADDPERDINLYINSPGGSVYDGMAIYDTMQFISN--DVATIAMGMAASMGQLLLCA-- 109 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMM 178 G+ G + P+ + + + I S + AE +++ +M Sbjct: 110 ----------GTPGKRYALPHARIMMHQPSGGIGGTASDVAILAEQMAYTK------KMF 153 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q+ V S H L R+ D R +T EAK+ G ID V Sbjct: 154 QERV--STHTGRTLDEIERDSDRD--------RWFTAEEAKEYGFIDQV 192 >gi|160939827|ref|ZP_02087174.1| hypothetical protein CLOBOL_04718 [Clostridium bolteae ATCC BAA-613] gi|158437261|gb|EDP15026.1| hypothetical protein CLOBOL_04718 [Clostridium bolteae ATCC BAA-613] Length = 315 Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 57/241 (23%) Query: 31 VEDNSPH--VARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSP 76 +EDN + I I G++E + ++ ++ I DDS L+V L++ Sbjct: 109 LEDNRRQRKIHLITIIGEVEGHENSSGSSKTTKYDHILPKLAEIEDDDSVDGLLVLLNTS 168 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GG AG AI I + P ++ V + S G ++ ++N Sbjct: 169 GGDVDAGLAIAEMIASLS--LPTVSLVLGGSHSIGVPLAVSTN----------------- 209 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Y ++ P + I V+ + M S E +M+QD + + VS Sbjct: 210 -YSFIVPSGTMM---IHPVRMTGMVIGTSQTYEY----FEMIQDRI-------LTFVSNH 254 Query: 197 RNIPYD---------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 +I YD K L G + G +A + GLI+ VGG +E LYA+ D+ R Sbjct: 255 ADIAYDQLRELMHNTKMLTRDLGTVLVGTQAVEAGLINQVGGIKEALGKLYAMIDDRERR 314 Query: 248 K 248 + Sbjct: 315 R 315 >gi|319408485|emb|CBI82140.1| putative capsid protein of prophage [Bartonella schoenbuchensis R1] gi|319409130|emb|CBI82774.1| putative capsid protein of prophage [Bartonella schoenbuchensis R1] Length = 280 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 5/175 (2%) Query: 68 ALIVSLSSPGGSA---YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+++ + S GG A + FRA+ + N KP+ +EMA SA Y I+CA++ I A Sbjct: 105 AILLDIDSGGGEAGGVFDLVDAFRALSQEYN-KPIWAHANEMACSAAYAIACAASQIWVA 163 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 T +VGSIGV+ + + G V K +P + KA++ MQ Sbjct: 164 RTGIVGSIGVVCAHLDQSRADEMDGYKWTFVYEGDHKVHGNPHEPLADKALEKMQADCAL 223 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 Y FV LV+++R + + + + G +A ++GL D G + ++L A Sbjct: 224 LYDMFVDLVAQNRPTSA-QAIRDTKAETFIGTQAVELGLADAQGTFAQALEALTA 277 >gi|297734120|emb|CBI15367.3| unnamed protein product [Vitis vinifera] Length = 150 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 AE PF P ++ ++Y F + SR++ DK + GR+WTG +A Sbjct: 50 AELRPF---RPDEAELFAKSAWNAYKQFRDKTAFSRSMAVDKMEEKAQGRVWTGKDAASR 106 Query: 222 GLIDVVGG 229 GL+D +GG Sbjct: 107 GLVDAIGG 114 >gi|163753152|ref|ZP_02160276.1| ATP-dependent Clp protease proteolytic subunit 2 [Kordia algicida OT-1] gi|161326884|gb|EDP98209.1| ATP-dependent Clp protease proteolytic subunit 2 [Kordia algicida OT-1] Length = 230 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 DS+ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA A Sbjct: 92 DSSKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCAGQ---A 146 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S + V+ P LG + + + S E+ + + ++++ Sbjct: 147 GKRSGLTHSRVMIHQP--------LGGA---------QGQASDI-EITAREILILKE--- 185 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDVV 227 +++S+ PY+K SD W A+ AK+ G+ID + Sbjct: 186 ----ELYKIISKHSGQPYEKIYEDSDRDYWMKADRAKEYGMIDEI 226 >gi|219117681|ref|XP_002179631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408684|gb|EEC48617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 101 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Query: 103 VHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 V ++AAS GY+I+C + + AA ++VGSIGV+ Q + L+ GV + Sbjct: 19 VDKVAASGGYMIACTASPGRLFAAPFAVVGSIGVIGQTFNIHKTLEGWGVRPLVFRGGRD 78 Query: 161 KAEPSPFSEVNPKAVQMMQDVVD 183 KA EV + + +QD+VD Sbjct: 79 KAPVGLVGEVTEEGLAKVQDMVD 101 >gi|187736113|ref|YP_001878225.1| protein of unknown function DUF107 [Akkermansia muciniphila ATCC BAA-835] gi|187426165|gb|ACD05444.1| protein of unknown function DUF107 [Akkermansia muciniphila ATCC BAA-835] Length = 478 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAY-AGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + RI + ++++ A A+I L++PGG A+ E + ++IQ + P V+ A SAG Sbjct: 50 FMNRILKRAQEEQARAVIFDLNTPGGLAWETSEMMMKSIQPLT--IPTYAYVNPRAMSAG 107 Query: 112 YLISCASNIIVAAETSLVGSIGVL 135 LIS A + I A S +G+ G++ Sbjct: 108 ALISAACDKIYMAPVSSIGAAGII 131 >gi|145480043|ref|XP_001426044.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393116|emb|CAK58646.1| unnamed protein product [Paramecium tetraurelia] Length = 292 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 8/180 (4%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 S AL + ++S GG Y E + + I+ N P+ T E + Y + N A Sbjct: 42 SVIALGLIINSQGGCPYQVEVLSKKIKSYLNGLPLYTFATEQSLGNAYQLLQLGNKSYAQ 101 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 TS +G + FL G++ +SS + + Q D +D Sbjct: 102 NTSKIGFTQMYKNKLNFADFLQNYGINTFQYQSSQIVNHNFVVNSSIRGNSQQDMDYLDQ 161 Query: 185 SYHWFVRLVSES------RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Y + V++ I +K + + ++ G EAK +GL+D +G E+V Y Sbjct: 162 YYGLKTKQVTDQCWTNRKEQIKINKDQL--ENNVFLGKEAKDLGLVDELGTYEKVLMQQY 219 >gi|213581681|ref|ZP_03363507.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 107 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 MMQ ++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G ++ Sbjct: 1 MMQLSIEYGYKRFITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDD---- 56 Query: 237 LYALGVDQSIRKIKDWN 253 A+ + K+K W+ Sbjct: 57 --AVAKAAELAKLKQWH 71 >gi|313673695|ref|YP_004051806.1| hypothetical protein Calni_1737 [Calditerrivibrio nitroreducens DSM 19672] gi|312940451|gb|ADR19643.1| hypothetical protein Calni_1737 [Calditerrivibrio nitroreducens DSM 19672] Length = 271 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I+DS+E++ I+ D + + L +PGG A I RA++K + V V Sbjct: 66 NIDDSEEVLRAIQMT---DKNVPIDIILHTPGGLVLASLQIARALKKHPGK--VTVFVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LIS A++ IV +E +++G + L +YP Sbjct: 121 YAMSGGTLISLAADEIVMSENAVLGPVDPQLGEYP 155 >gi|206890313|ref|YP_002249833.1| periplasmic serine protease [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742251|gb|ACI21308.1| periplasmic serine protease [Thermodesulfovibrio yellowstonii DSM 11347] Length = 280 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E++ I ++ DD+ L+V +PGG A A I RA+ + K + V V Sbjct: 69 IHDSEEVLRAI-HLTDDDTPIDLVVH--TPGGLAIAATQIARALSRQKAKVTVF--VPHY 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ +++ IV E +++G + Sbjct: 124 AMSGGTLIALSADEIVMCEHAVLGPL 149 >gi|221632773|ref|YP_002521995.1| hypothetical protein trd_0764 [Thermomicrobium roseum DSM 5159] gi|221156384|gb|ACM05511.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM 5159] Length = 282 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 27/197 (13%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D E + R R++ D+ IV +PGG A E I A+ V++R V V A Sbjct: 69 DDAEAVLRAIRLTPDEMPIDFIVH--TPGGLVLAAEQIASAL--VRHRGKVTVFVPHYAM 124 Query: 109 SAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKA---EP 164 S G LI+ A++ IV E +++G + + QYP ++ V+ P+ + Sbjct: 125 SGGTLIALAADEIVMDENAVLGPVDPQIGQYPAAS--------VLRVVREKPVAEIDDQT 176 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AEA 218 +++ KA++ + V R E++ I VL+ G+ WT EA Sbjct: 177 LILADIGEKAMRQVNATVRHILMANGRSEEEAQRI----ADVLTCGQ-WTHDYPIDVEEA 231 Query: 219 KKVGLIDVVGGQEEVWQ 235 +++GL VG +EV+Q Sbjct: 232 RQLGLPVTVGVPDEVYQ 248 >gi|325571458|ref|ZP_08146958.1| periplasmic serine protease [Enterococcus casseliflavus ATCC 12755] gi|325155934|gb|EGC68130.1| periplasmic serine protease [Enterococcus casseliflavus ATCC 12755] Length = 297 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIV 122 D L + L +PGG+ A E+I + ++ + KN VI V MA SAG +I+CAS I+ Sbjct: 77 DRRKGLDLILHTPGGNPSAAESIVKYLRFLFKNDIRVI--VPHMAMSAGTMIACASKEII 134 Query: 123 AAETSLVGSIGVLFQ 137 S +G I FQ Sbjct: 135 MGYQSSLGPIDPQFQ 149 >gi|158320276|ref|YP_001512783.1| hypothetical protein Clos_1241 [Alkaliphilus oremlandii OhILAs] gi|158140475|gb|ABW18787.1| protein of unknown function DUF107 [Alkaliphilus oremlandii OhILAs] Length = 430 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELI--ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 + + +V I IRG+I + L + + D +ATA+I + + GG + E I + Sbjct: 24 DQGAGNVYVIPIRGEITPAMHLYVKHNLSIVESDKNATAVIFEIDTYGGRIDSSEQIGKL 83 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 I + P I+ V+ A SAG L++ +S+ I A +S +GS Sbjct: 84 I--LNTNIPTISFVNTKAESAGVLLTISSDTIAMAPSSTIGS 123 >gi|312885607|ref|ZP_07745243.1| Endopeptidase Clp [Mucilaginibacter paludis DSM 18603] gi|311301919|gb|EFQ78952.1| Endopeptidase Clp [Mucilaginibacter paludis DSM 18603] Length = 232 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 45/172 (26%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D+ + + ++SPGGS YAG I+ +Q + N V T MAAS G ++ CA Sbjct: 91 DAKRDIQIYINSPGGSVYAGLGIYDTMQFISN--DVATICTGMAASMGAVLLCA------ 142 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G+ G P+ S M +PS Q Q ++ Sbjct: 143 ------GTAGKRAALPH----------------SRVMIHQPSG-------GAQGQQSDIE 173 Query: 184 SSYHWFVRL-------VSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVV 227 +YH +L +++ Y+K SD W A EAK+ G++D + Sbjct: 174 ITYHEITKLKKELYQIIADHSGASYEKVWDASDRDYWMIAEEAKEFGMVDEI 225 >gi|222530657|ref|YP_002574539.1| hypothetical protein Athe_2712 [Caldicellulosiruptor bescii DSM 6725] gi|222457504|gb|ACM61766.1| protein of unknown function DUF114 [Caldicellulosiruptor bescii DSM 6725] Length = 269 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E+I I + D + L + L +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAI---NMTDPSIPLDIILHTPGGLVLAATQIARAIKRHKGK--VTVHVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S LI+ A++ IV +E +++G + Sbjct: 122 AMSGCTLIALAADEIVMSEDAILGPV 147 >gi|300689946|ref|YP_003750941.1| bacteriophage head-tail preconnector protein GP5 [Ralstonia solanacearum PSI07] gi|299077006|emb|CBJ49620.1| bacteriophage head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Ralstonia solanacearum PSI07] Length = 419 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 1/166 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A+++ + SPGG + + I+ KPV ++MA SA Y ++CA++ + Sbjct: 97 DPGIAAILLDVDSPGGESGGVFDLADRIRAAAAIKPVWVVANDMAFSAAYALACAASRVF 156 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + T VGSIGV+ + K GV +V + K + +P + +A +Q V Sbjct: 157 VSRTGGVGSIGVIAMHVDQSVKDAKDGVRYTAVFAGARKNDLNPHEPLTDEAQAQLQAEV 216 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 Y FV V+ R + + T+ ++ ++ G +A GL D VG Sbjct: 217 SRIYGLFVATVARYRGLSAE-TVTATEAGLFFGQDAVAAGLADAVG 261 >gi|167032211|ref|YP_001667442.1| peptidase S14 ClpP [Pseudomonas putida GB-1] gi|166858699|gb|ABY97106.1| peptidase S14 ClpP [Pseudomonas putida GB-1] Length = 383 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%) Query: 31 VEDNSPHVARIAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 V D P+ I I G+I + + + ++ I DD + + V+ ++ GG + G AI Sbjct: 36 VADAEPNPIEIYIYGEIGGWGITANQFLRDLKAI--DDGVSPVHVAFNTSGGDLFEGVAI 93 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A++++ R + +AASAG + C ++ +VAA T++ ++ PY Sbjct: 94 HNALRRLGER--CTGRIDALAASAGSVAVCGAHRVVAASTAI-----LMIHNPYT 141 >gi|189218107|ref|YP_001938749.1| membrane-bound serine protease, NfeD family [Methylacidiphilum infernorum V4] gi|189184965|gb|ACD82150.1| Membrane-bound serine protease, NfeD family [Methylacidiphilum infernorum V4] Length = 481 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-ELIERIER 59 M ++KI + LS + F + ++ V + IR +IE S + R Sbjct: 15 MRLGMRKIAA--IFLSFFSFCSPLFLNAGAIKGEGKIVYVLPIRDEIEQSMVYFVRRAVN 72 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + + A LI+ + +PGG A + E I R +++ ++ + A SAG I+ Sbjct: 73 EAMKNGAQGLILDIDTPGGLANSMEKIIRELERFPLQENTYAFIDHKAYSAGAFIAACCR 132 Query: 120 IIVAAETSLVGS 131 I A S++G+ Sbjct: 133 HIYMAPGSVIGA 144 >gi|313677301|ref|YP_004055297.1| hypothetical protein Ftrac_3215 [Marivirga tractuosa DSM 4126] gi|312943999|gb|ADR23189.1| protein of unknown function DUF107 [Marivirga tractuosa DSM 4126] Length = 461 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDS 65 ++ + V L+ L ++ FS + D V + I+ QI+ + +E + +++ + Sbjct: 11 RMHMKRVAFILLLLGIIQFSIFADSTDVKQEVFIMEIKDQIDVRTNRYVELALQEAKERN 70 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 ++ +++ +++ GG+ Y + I A+ + PV + AASAG LIS A + I A Sbjct: 71 SSHILIEMNTYGGALYDADEIRSALLNLD--IPVYVFIDNNAASAGALISIACDSIYMAP 128 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 +G+ V+ Q P DK ++S+ S +A S +P+ + M D Sbjct: 129 GGSIGAATVVNQTGEAAP--DKYQSYMRSIMRSTAEA-----SGRDPRIAEAMVD 176 >gi|289641548|ref|ZP_06473710.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata] gi|289508643|gb|EFD29580.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata] Length = 211 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 34/192 (17%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G + + Q +I ++ +S +D + + ++SPGGS AG AI+ +Q V+N Sbjct: 36 RIIFLGSVVEDQIANTIIGQLLLLSAEDPNRDISLYINSPGGSVSAGMAIYDVMQYVEN- 94 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 ++T +AAS G + CA G+ G + P+ + + + I Sbjct: 95 -DIVTVALGLAASMGQFLLCA------------GTAGKRYSLPHTRIMMHQPSGGIGGTA 141 Query: 157 SS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S ++AE +++ +MMQ+ + ++H + R+ D R +T Sbjct: 142 SDIAIQAEQMLYTK------RMMQERI--AFHTGQPVEQIERDSDRD--------RWFTA 185 Query: 216 AEAKKVGLIDVV 227 EAK G +D V Sbjct: 186 VEAKDYGFVDHV 197 >gi|320108131|ref|YP_004183721.1| peptidase S49 [Terriglobus saanensis SP1PR4] gi|319926652|gb|ADV83727.1| peptidase S49 [Terriglobus saanensis SP1PR4] Length = 213 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 30/52 (57%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 Q +VD+ + F+ V+ R DK L L+ G++WTG +A + LID GG Sbjct: 101 FQTLVDNMHGQFIHDVATGRGTSDDKILPLATGQVWTGQQAIGLHLIDKQGG 152 >gi|225709548|gb|ACO10620.1| Probable protease sohB [Caligus rogercresseyi] Length = 131 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%) Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 N P + +H A S GY + CA + I + SL+GSIG + ++ F+ + + + Sbjct: 3 NNSFPPFSYLHH-ALSGGYWLLCAGDEIYINQCSLIGSIGAIMASFGLEKFIKRHDIERR 61 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRI 212 + + K+ PF E+ + ++ + F V +SR N L +G Sbjct: 62 VLTAGKNKSIMDPFVEMTEAERLRLSAILSDIHEPFKEHVRKSRGNKLIKDEDKLFNGEF 121 Query: 213 WTGAEA 218 W G A Sbjct: 122 WCGQAA 127 >gi|299067579|emb|CBJ38781.1| bacteriophage head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Ralstonia solanacearum CMR15] Length = 416 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 1/177 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D A+++ + SPGG + + I+ KPV ++MA SA Y ++ A++ + Sbjct: 97 DQGVAAILLDVDSPGGESSGVFDLADRIRAAAAVKPVWAVANDMAFSAAYALASAASRVF 156 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + T VGSIGV+ + K G+ +V + K + +P + + +A +Q V Sbjct: 157 VSRTGGVGSIGVIAMHVDQSVKDAKDGIHYTAVFAGARKNDLNPHAPITDEAQAQLQAEV 216 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 Y FV V+ R + + G ++ G +A GL D VG E+ L A Sbjct: 217 SRIYGLFVATVASYRGLSVEAVTATEAG-LFFGPDAVTAGLADAVGTFEDALAQLNA 272 >gi|298346553|ref|YP_003719240.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063] gi|304389729|ref|ZP_07371688.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655110|ref|ZP_07908012.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii ATCC 51333] gi|315657032|ref|ZP_07909917.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236614|gb|ADI67746.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063] gi|304326905|gb|EFL94144.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315490591|gb|EFU80214.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii ATCC 51333] gi|315492424|gb|EFU82030.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 202 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 31/181 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ + ++ ++ +D + + + ++SPGGS AG AI+ +Q VK V+T MA Sbjct: 38 ENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYDTMQYVK--PDVVTVAMGMA 95 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS G + A G+ G F P+ + + + P+ Sbjct: 96 ASMGQFLLTA------------GTKGKRFATPHARILMHQ-----------PLGGVQGTA 132 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 SEV A D++ + H ++ +E ++ +D W T EA + G ID Sbjct: 133 SEVRINA-----DLILAMKHELAQITAERTGHTLEEITRDADRDHWFTAQEALEYGFIDA 187 Query: 227 V 227 V Sbjct: 188 V 188 >gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfotomaculum acetoxidans DSM 771] gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfotomaculum acetoxidans DSM 771] Length = 194 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 33/190 (17%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I I G IED + +I ++ + +D + + ++SPGG AG AI+ +Q +K P Sbjct: 31 IFIGGPIEDYTANLIIAQLLFLEAEDPEKDIHLYINSPGGVVTAGMAIYDTMQYIK--PP 88 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V T AAS G + A G+ G F PY + + + S Sbjct: 89 VSTICLGQAASMGSFLLAA------------GAPGKRFALPYARIMIHQ--------PSG 128 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE- 217 M+ + + ++ K + M+++++ +L+S+ P DK S+ + AE Sbjct: 129 GMQGQATDIG-IHAKEILRMKEILN-------KLLSKHTKQPLDKITRDSERDFFMSAED 180 Query: 218 AKKVGLIDVV 227 AK+ G+ID + Sbjct: 181 AKEYGIIDQI 190 >gi|69245972|ref|ZP_00603744.1| signal peptide peptidase [Enterococcus faecium DO] gi|68195502|gb|EAN09946.1| signal peptide peptidase [Enterococcus faecium DO] Length = 165 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + +E+++ I D + + + ++SPGG Y I + + ++ P+ + M Sbjct: 85 NHKNFMEQLKAIEEDPTVKGIFLEVNSPGGGVYESAEIAKKLDTIRKEHDIPMYVSMKNM 144 Query: 107 AASAGYLISCASNIIV 122 AAS GY IS ++ I+ Sbjct: 145 AASGGYYISAQADKIL 160 >gi|161833700|ref|YP_001597896.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia muelleri GWSS] gi|293977810|ref|YP_003543240.1| protease subunit of ATp-dependent Clp protease [Candidatus Sulcia muelleri DMIN] gi|152206190|gb|ABS30500.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia muelleri GWSS] gi|292667741|gb|ADE35376.1| Protease subunit of ATP-dependent Clp protease [Candidatus Sulcia muelleri DMIN] Length = 219 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 33/166 (19%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE-MAASAGYLISCASNIIV 122 DS + + ++SPGGS Y+G I+ +Q + KP I+ + +AAS ++ C+ Sbjct: 83 DSNKGIQIYINSPGGSVYSGLGIYDTMQIL---KPEISTICTGIAASMAAILLCSGK--- 136 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + S++ VL P + +SS M E+ + + +++ + Sbjct: 137 KGKRSILKHSRVLIHQP----------IGYAKGQSSDM--------EITVREILKLKEEL 178 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + +++SE N P++K SD W T EAK G++D + Sbjct: 179 N-------KIISEHTNQPFEKVQKDSDRDYWMTSEEAKNYGIVDEI 217 >gi|153816437|ref|ZP_01969105.1| hypothetical protein RUMTOR_02690 [Ruminococcus torques ATCC 27756] gi|317500190|ref|ZP_07958422.1| translocation-enhancing protein TepA [Lachnospiraceae bacterium 8_1_57FAA] gi|331087582|ref|ZP_08336512.1| hypothetical protein HMPREF1025_00095 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846225|gb|EDK23143.1| hypothetical protein RUMTOR_02690 [Ruminococcus torques ATCC 27756] gi|316898405|gb|EFV20444.1| translocation-enhancing protein TepA [Lachnospiraceae bacterium 8_1_57FAA] gi|330400453|gb|EGG80086.1| hypothetical protein HMPREF1025_00095 [Lachnospiraceae bacterium 3_1_46FAA] Length = 235 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 47/201 (23%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L+ R+ +I DD +++ L++ GG AG AI I + KP ++ V Sbjct: 57 EHLLPRLAQIEEDDETDGVLILLNTLGGDVEAGLAIAEMIASLS--KPTVSLV------L 108 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G S + V+A+ S + G + +P V+S+ M Sbjct: 109 GGSHSIGGPLAVSADYSFIVPTGTMIVHP---------------VRSTGM---------- 143 Query: 171 NPKAVQMMQDV--VDSSYHWFVRLVSESRNIPYDKTLVL---------SDGRIWTGAEAK 219 + +MQ ++ + + ++ NI D+ L L G + G +A Sbjct: 144 ---FIGVMQSYRNMEKTQDRITKFIASHSNITQDRLLELMLDSSQLVKDVGTMLEGEQAV 200 Query: 220 KVGLIDVVGGQEEVWQSLYAL 240 K G+ID VGG +E + L++L Sbjct: 201 KEGMIDEVGGIKEAFAKLHSL 221 >gi|325674309|ref|ZP_08153998.1| Clp protease [Rhodococcus equi ATCC 33707] gi|325554989|gb|EGD24662.1| Clp protease [Rhodococcus equi ATCC 33707] Length = 376 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 6/73 (8%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +Q + E+I+ I+ D+ + V ++SPGGSA+ G AI A++ R V+ V +AAS Sbjct: 34 AQAIAEQIKDITADE----ITVRINSPGGSAFDGIAIMNALRAHNAR--VVVHVDGLAAS 87 Query: 110 AGYLISCASNIIV 122 A +I+ A + IV Sbjct: 88 AASVIAMAGDEIV 100 >gi|99081464|ref|YP_613618.1| serine peptidase [Ruegeria sp. TM1040] gi|99037744|gb|ABF64356.1| protein C. Serine peptidase. MEROPS family S49 [Ruegeria sp. TM1040] Length = 315 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 16/171 (9%) Query: 69 LIVSLSSPGGSAYA-GEA--IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 ++V + SPGG GEA RA K P+ V ASA Y + IV Sbjct: 122 IVVVVDSPGGVVSGLGEASETLRATTK-----PITAFVTGNCASAAYWLCSQFGEIVMDR 176 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ VGSIGV+ + ++ S + V S+ P P +E A+Q D ++ Sbjct: 177 SAAVGSIGVVASLSRQEAADNQGRRSYEIVSSNAPNKRPDPSTEEGRTAIQKDIDAIE-- 234 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEV 233 F+ V+ R + D+ V SD G + + A + G+ D +G E V Sbjct: 235 -EVFIADVAAGRRVSADR--VRSDFGRGAMLSATRAIEAGMADRIGTLEGV 282 >gi|86158227|ref|YP_465012.1| hypothetical protein Adeh_1802 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774738|gb|ABC81575.1| hypothetical protein Adeh_1802 [Anaeromyxobacter dehalogenans 2CP-C] Length = 632 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEV 103 G + ++++ ++ER SRD + A+++ + S GGS++AG A+ A++ + ++ V+ V Sbjct: 34 GPVLQLRDVLAQLERASRDRAVGAVLLVVDSLGGSSWAGLALCEALRCLSEDGVRVVAHV 93 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 A SA + ++++ AA +++ G+ V+P Sbjct: 94 AGTAGSAAAVAILGADVVTAAPGAVIHPHGLCIPAAAVQP 133 >gi|237747841|ref|ZP_04578321.1| ClpP protease [Oxalobacter formigenes OXCC13] gi|229379203|gb|EEO29294.1| ClpP protease [Oxalobacter formigenes OXCC13] Length = 277 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 6/107 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQE----LIERIERISRDDSATALIVSLSSPGGSAYA 82 W V+ + A I+I I ++ E +RI + R+ + ++V ++SPGG+ + Sbjct: 30 WLPDVKSATESAATISILDTIGENMEGGGITAKRIAAVLRNAEGSDIVVDINSPGGNFFE 89 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 G AI+ +++ K + V V +AASA +I+ A + I+ E + + Sbjct: 90 GVAIYNQLREHKGK--VTCRVLSLAASAASVIAMAGDEILMGEGAFL 134 >gi|37626162|gb|AAQ96537.1| putative protease [Vibrio phage VP16C] Length = 395 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 16/180 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASA 110 +L E I+ DDS + ++ SPGG A E + K++N +KP V +++A Sbjct: 82 DLFEAIDAAENDDSIKRIEYAIDSPGGEA---EGAIKLGDKIRNAKKPSTALVSTASSAA 138 Query: 111 GYLISCASNIIVAAETSLVGSIGVLF--QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S A I+ A+ S VG+IG + + P ++D + +P K P P S Sbjct: 139 YLAASQADEIVAASRVSRVGNIGAVLSMRRPSTSVYVD------VTSTDAPNK-RPDPES 191 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVV 227 E + ++ + +D ++ F + V++ R D G A K+G+ID + Sbjct: 192 EEGRRVIR--EQSLDPLHNMFAQAVADGRGTTLSDVNQNFGRGGSLFAETALKMGMIDKI 249 >gi|328545661|ref|YP_004305770.1| peptidase S49 [polymorphum gilvum SL003B-26A1] gi|326415401|gb|ADZ72464.1| Peptidase S49 [Polymorphum gilvum SL003B-26A1] Length = 439 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 11/186 (5%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-----KNRKPVITEV 103 D E+ +E D + A++V + SPGG +F + ++ +KP+ Sbjct: 82 DYGEVASAVEAALADPTVRAVLVEIDSPGGEVGG---LFDLVDRLVSLRQDAQKPLWAVA 138 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL-GVSIKSVKSSPMKA 162 E A SA + I+ ++ + T+ VGSIGV+ + + D + G+ V + K Sbjct: 139 SESALSAAFAIASVADRLYVTRTAEVGSIGVVAIH-VDESVADVMAGLKWTLVHAGDRKI 197 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 E + + ++ A+ +Q VD+ + V LV+ +RN+ D ++ I+ G G Sbjct: 198 EGNAHAPLSDTALSAIQADVDALHADLVTLVARNRNMSPDAVRA-TEAAIYRGQRGIGAG 256 Query: 223 LIDVVG 228 L D +G Sbjct: 257 LADKLG 262 >gi|89889548|ref|ZP_01201059.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria bacterium BBFL7] gi|89517821|gb|EAS20477.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria bacterium BBFL7] Length = 224 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D+ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DANKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCA------ 137 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G+ G P+ + + ++ SS + + S + V++ +++ Sbjct: 138 ------GADGKRSALPHSRVMIHQV--------SSGAQGQASDIEITAREVVKLREEL-- 181 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVV 227 ++++ Y+K SD W AEAK+ G+ID V Sbjct: 182 ------YTIIAKHSKQTYEKVYADSDRDYWMKAAEAKEYGMIDEV 220 >gi|291542999|emb|CBL16109.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus bromii L2-63] Length = 269 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 48/204 (23%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + D+ L+V +++ GG AG AI I +K KP ++ + G+ I Sbjct: 93 VEEDERIDGLLVLINTVGGDVEAGLAIAEVISGMK--KPTVS----IVLGGGHSIGIP-- 144 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 + VAA+ S + + +P L LGV P F + Q MQ Sbjct: 145 LAVAAKKSFIAKSASMTVHPVRTTGL-TLGV-------------PQTF-----EYFQRMQ 185 Query: 180 DVVDSSYHWFVRLVSESRNIPYDK---------TLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 D + + V+E+ NI D+ LV+ G I G EA + GLID VG Sbjct: 186 DRITT-------FVAENSNITKDRYNQLVLNTGELVMDIGTILEGEEAVEEGLIDEVGTV 238 Query: 231 EEVWQSLYALGVDQSIRKIKDWNP 254 + +LY L I++ K+ P Sbjct: 239 SDAIDALYDL-----IKESKESKP 257 >gi|242398666|ref|YP_002994090.1| NfeD nodulation like protein, probable membrane protein [Thermococcus sibiricus MM 739] gi|242265059|gb|ACS89741.1| NfeD nodulation like protein, probable membrane protein [Thermococcus sibiricus MM 739] Length = 451 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 7/78 (8%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHE---MAASAGYLISCASNI 120 +A A+I+ L +PGG A A + I I+++K+ + PVIT V+ MAASAG I+ S++ Sbjct: 55 NANAIIILLDTPGGRADAMQNI---IERIKSAEVPVITYVYPPGGMAASAGTYIALGSHL 111 Query: 121 IVAAETSLVGSIGVLFQY 138 I A + +G+ + Y Sbjct: 112 IAMAPGTSIGACRPILGY 129 >gi|298491692|ref|YP_003721869.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc azollae' 0708] gi|298233610|gb|ADI64746.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc azollae' 0708] Length = 232 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +DS + + ++SPGGS YAG AI+ IQ++ R V+T +AAS G + A Sbjct: 80 EDSGKDIQLYINSPGGSVYAGMAIYDTIQQI--RPDVVTICFGLAASMGAFLLTAG 133 >gi|294677522|ref|YP_003578137.1| S49 family peptidase [Rhodobacter capsulatus SB 1003] gi|3128372|gb|AAC16224.1| potential peptidase [Rhodobacter capsulatus SB 1003] gi|294476342|gb|ADE85730.1| peptidase, S49 family [Rhodobacter capsulatus SB 1003] Length = 303 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 16/180 (8%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++V +PGG E A++ + KPV +AASAGY ++ + +V + Sbjct: 100 VVVEFDTPGGYTLGIEDAVTALRDLAAVKPVHALAAPLAASAGYWLASQARELVMTPRAA 159 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEVNPKAVQMMQDVVDSSYH 187 VGSIGV GV + S +A+ P P +E ++ D ++ +H Sbjct: 160 VGSIGVAVTAAANVAPGAASGVQLFDFTSRHARAKWPDPATEDGKAEIRRGLDRTEARFH 219 Query: 188 WFVRLVSESRNI-PYDKTLVLS-------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+E R I P D LS G ++ AEA GL D + E + YA Sbjct: 220 A---AVAEGRGIAPEDLAARLSVSDDPEDGGAVFEAAEALARGLADRI----ETRAAFYA 272 >gi|254517072|ref|ZP_05129130.1| hypothetical protein NOR53_169 [gamma proteobacterium NOR5-3] gi|219674577|gb|EED30945.1| hypothetical protein NOR53_169 [gamma proteobacterium NOR5-3] Length = 470 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 28/175 (16%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMA 107 Q IER E ++ A LI+ L +PGG + + ++I + +R PV+T V A Sbjct: 44 QRGIERAE----EEGAELLIIELDTPGGLMASTHDLIKSI--LASRVPVVTYVSPSGSRA 97 Query: 108 ASAGYLISCASNIIVAAETSLVGS-----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ASAG I AS++ A + +GS +G L +P KP + K +P Sbjct: 98 ASAGTYILLASHVAAMAPATHLGSATPVQMGGLPGFPSNKPPASP--TAPKGPGETPQDT 155 Query: 163 EPSPFSEVNPKAVQ--MMQDVVD-----SSYH-----WFVRLVSESRNIPYDKTL 205 PS + + A++ +++D V +++H W R V E+ N+ + L Sbjct: 156 APSKPASGSASAMERKVLEDAVSYIRELATHHGRNADWAERAVREAANLGAQEAL 210 >gi|146299462|ref|YP_001194053.1| endopeptidase Clp [Flavobacterium johnsoniae UW101] gi|146153880|gb|ABQ04734.1| Endopeptidase Clp [Flavobacterium johnsoniae UW101] Length = 224 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D++ + + L+SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DASKDIQIYLNSPGGSVYAGLGIYDTMQYIK--PDVATICTGMAASMGAVLLCA------ 137 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G+ G P+ + + + + V + E+N ++ M + D Sbjct: 138 ------GAAGKRSALPHSRVMIHQPSGGAQGVATD---------MEIN---LREMLKLKD 179 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVV 227 YH ++S+ +++ S+ W A EAK+ G+ID V Sbjct: 180 ELYH----IISQHSGQSFERVHKDSERDYWMIADEAKEYGMIDEV 220 >gi|169841767|ref|ZP_02874876.1| Protease IV [candidate division TM7 single-cell isolate TM7a] Length = 75 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Query: 156 KSSPMKAEPSPFS-EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K S + +P S E K Q MQ+ +Y F VS+SR I + + G+IW Sbjct: 1 KYSDINDSFAPLSQESRDKITQSMQE----TYSEFKSRVSKSRKIDENTLENYAQGKIWL 56 Query: 215 GAEAKKVGLIDVVGGQEEV 233 G EAK + L+D + +EV Sbjct: 57 GDEAKNINLVDGIASLDEV 75 >gi|146278618|ref|YP_001168777.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145556859|gb|ABP71472.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 327 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 88 LAETLTHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAAAVKPVHALVSPLAASAAY 147 Query: 113 LISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAE-PSPFSEV 170 ++ ++ IV ++ GSIGV L +V+P + G I + S +A+ P ++ Sbjct: 148 WLASQASEIVMTPGAVAGSIGVALTAAAHVQPGAN--GAQIFEMSSRHARAKRPDASTKA 205 Query: 171 NPKAVQMMQDVVDSSYH 187 +Q D ++++H Sbjct: 206 GRAELQRSLDEAEAAFH 222 >gi|221127548|ref|XP_002155030.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 291 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 38/168 (22%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSS---------HVEDNSPHVARIAI-----RGQIE 48 FVL KI + +L +FS S+ +VE+N + RI + R + Sbjct: 5 FVLNKIIPKARFTTLTGQPNCFFSTSNILKDSFTLMNVEENG--ICRITMNSIKKRNALS 62 Query: 49 DS--QELIERIERISRDDSATALIVSLSSPGGSA--------------YAGEAIFRAIQK 92 S QELIER + + +D A+I++ + P SA Y + +F+ + Sbjct: 63 LSMLQELIERFKTAAENDRVRAVILAHNGPCFSAGHDLKELTSDNTKSYHAQ-VFQRCTE 121 Query: 93 VKNR-----KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 + N PVI EV+ +A +AG + +I VA TS GVL Sbjct: 122 LMNLIQDIPTPVIAEVNGIATAAGCQLVATCDIAVATHTSSFAVPGVL 169 >gi|150026123|ref|YP_001296949.1| ATP-dependent Clp protease proteolytic subunit [Flavobacterium psychrophilum JIP02/86] gi|149772664|emb|CAL44147.1| S14 family, ATP-dependent Clp protease proteolytic subunit [Flavobacterium psychrophilum JIP02/86] Length = 233 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D++ + + L+SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 96 DASKDIQIYLNSPGGSVYAGLGIYDTMQYIK--PDVATICTGMAASMGAVLLCA------ 147 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G+ G P+ + + + + V + E+N + + ++D Sbjct: 148 ------GAAGKRSALPHSRVMIHQPSGGAQGVATD---------MEINLREMLKLKD--- 189 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVV 227 ++S +DK S+ W A +AK+ G+ID V Sbjct: 190 ----ELYNIISHHSGQTFDKVHADSERDYWMIADQAKEYGMIDEV 230 >gi|152968201|ref|YP_001363985.1| ATP-dependent Clp protease proteolytic subunit [Kineococcus radiotolerans SRS30216] gi|151362718|gb|ABS05721.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216] Length = 240 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 17/111 (15%) Query: 40 RIAIRGQ-IEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + GQ ++D+ + ++ +S DD + + + ++SPGGS AG AI+ ++ + N Sbjct: 58 RIVVLGQEVDDAVANRICAQLLLLSADDPRSDIALYVNSPGGSISAGLAIYDTMRLIPN- 116 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 V T V MAAS G + CA G+ G + P+ + + + Sbjct: 117 -DVSTLVMGMAASMGQFLLCA------------GTAGKRYALPHARVMMHQ 154 >gi|83310271|ref|YP_420535.1| periplasmic serine protease [Magnetospirillum magneticum AMB-1] gi|82945112|dbj|BAE49976.1| Periplasmic serine protease [Magnetospirillum magneticum AMB-1] Length = 404 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 3/168 (1%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNI 120 D A+++ + S GG + IQ ++ + KP+ E A SA Y I+C ++ Sbjct: 96 DPGVRAILLDVDSSGGEVGGLFDLVDHIQAIRAQCGKPIWAIADEAALSAAYAIACTADR 155 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + +T +GSIGV+ + + G + + + K + +P ++ A +Q Sbjct: 156 LYLTQTGEIGSIGVVAIHVDESAADAQAGRAWSFIHAGASKVDGNPHQPLSDSARATLQA 215 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 VD+ Y F LV+E R + D + ++ ++ G +A GL D VG Sbjct: 216 DVDALYGKFTALVAERRRLSPD-AIRATEAAVYRGDQAVAAGLADKVG 262 >gi|212528852|ref|XP_002144583.1| carnitinyl-CoA dehydratase, putative [Penicillium marneffei ATCC 18224] gi|210073981|gb|EEA28068.1| carnitinyl-CoA dehydratase, putative [Penicillium marneffei ATCC 18224] Length = 276 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 16/102 (15%) Query: 33 DNSPHVARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 DN P + + G+ S Q+LIE+ +S + S +LS P G F Sbjct: 53 DNEPSLRVAVVTGKGSKSFCAGQDLIEQNNNVSGNKSG-----NLSHPPGG-------FM 100 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + + +KPVI V+ A G+ I +IIVA+ T+ G Sbjct: 101 GLSRRRGKKPVIAAVNGYALGGGFEICLNCDIIVASPTATFG 142 >gi|260892139|ref|YP_003238236.1| protein of unknown function DUF114 [Ammonifex degensii KC4] gi|260864280|gb|ACX51386.1| protein of unknown function DUF114 [Ammonifex degensii KC4] Length = 278 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D + + L +PGG A E I RA++K + V V Sbjct: 69 IEDSEQILRAIRYTPPD---MPIDILLHTPGGLVLAAEQIARALRKHPAK--VTVFVPHY 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G +I+ A++ IV E +++G + Sbjct: 124 AMSGGTMIALAADEIVMDENAVLGPV 149 >gi|329115488|ref|ZP_08244236.1| Peptidase [Acetobacter pomorum DM001] gi|326695198|gb|EGE46891.1| Peptidase [Acetobacter pomorum DM001] Length = 347 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 16/140 (11%) Query: 11 RY-VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA- 68 RY MLS V T + +++V N VA I + G I L+ + S +A Sbjct: 77 RYQTMLSAVADTGKRMNGTNNVTLNKQGVATIPVMGPIFPRANLLTEFSGATDLSSLSAD 136 Query: 69 ------------LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 +++ SPGG + A Q + KPV V MAASA Y ++ Sbjct: 137 LQAALSSADVKQILMVFDSPGGVTTGVSDM--ASQIAASSKPVTAFVPGMAASAAYWLAS 194 Query: 117 ASNIIVAAETSLVGSIGVLF 136 + I+ T+LVGSIGV+ Sbjct: 195 QCSTILMDNTALVGSIGVVM 214 >gi|331091074|ref|ZP_08339916.1| hypothetical protein HMPREF9477_00559 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405296|gb|EGG84832.1| hypothetical protein HMPREF9477_00559 [Lachnospiraceae bacterium 2_1_46FAA] Length = 226 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L+ ++ + + L++ L++ GG AG AI I + KP ++ Sbjct: 54 EHLLPKLAEVEDSEEIEGLLILLNTLGGDVEAGLAIAEMIASLS--KPSVS--------- 102 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +++ S+ G + V Y ++ P S M P S Sbjct: 103 ---------LVLGGSHSIGGPLAVSADYSFIVP-------------SGTMVIHPVRSSGT 140 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---------TLVLSDGRIWTGAEAKKV 221 +Q +++ + + + + +SE NI ++ LV G + G EA K Sbjct: 141 FIGVMQSYRNM-ERTQNRITKFISEHANISQERIEELMLDPTQLVKDVGTMLEGEEAVKE 199 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG +E Q L+ L Sbjct: 200 GLIDEVGGMKEALQKLHEL 218 >gi|332799727|ref|YP_004461226.1| hypothetical protein TepRe1_1788 [Tepidanaerobacter sp. Re1] gi|332697462|gb|AEE91919.1| protein of unknown function DUF114 [Tepidanaerobacter sp. Re1] Length = 281 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+++I I+ D + + L +PGG A A I RA++ K + V + Sbjct: 74 INDSEKIIRAIQMT---DPNMPIDMILHTPGGVALAALQIARALKLHKGKVRVF--IPHY 128 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV + +++G + L QYP Sbjct: 129 AMSGGTLIALAADEIVMGDNAMLGPVDPQLGQYP 162 >gi|148241694|ref|YP_001226851.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. RCC307] gi|147850004|emb|CAK27498.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp. RCC307] Length = 200 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 4/77 (5%) Query: 45 GQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 G++ D + L+ ++ + DDS+ + + ++SPGGS AG AI+ IQ +K+ V+T Sbjct: 37 GEVNDGVANALVAQMLYLDSDDSSKPIYLYINSPGGSVTAGLAIYDTIQYIKS--DVVTI 94 Query: 103 VHEMAASAGYLISCASN 119 +AAS G + A Sbjct: 95 CVGLAASMGAFLLAAGT 111 >gi|87302965|ref|ZP_01085769.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 5701] gi|87282461|gb|EAQ74420.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 5701] Length = 200 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 33/194 (17%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIK 153 + V+T +AAS G + A G+ G P+ + + + LG + + Sbjct: 89 S--DVVTICVGLAASMGAFLLAA------------GTKGKRLALPHARIMIHQPLGGTSQ 134 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 S E+ + + ++D+++ S E D+ LS Sbjct: 135 RQASD---------IEIEAREILRIKDMLNQSLADMCGQSLEKVTKDTDRDYFLS----- 180 Query: 214 TGAEAKKVGLIDVV 227 AEAK GLID V Sbjct: 181 -AAEAKDYGLIDRV 193 >gi|326532262|dbj|BAK05060.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 169 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 16/60 (26%), Positives = 32/60 (53%) Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + P ++ + ++Y F + SR++ D+ + GR+W+G +A GL+D +GG Sbjct: 14 LRPDEAELFEKSAQNAYASFRDKAAMSRSMGIDQMENFAQGRVWSGQDAASRGLVDSLGG 73 >gi|323187659|gb|EFZ72962.1| head-tail preconnector protein GP5 domain protein [Escherichia coli RN587/1] Length = 169 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 44/86 (51%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ +++ D +++ + SPGG I +++ +KPV ++ A SA Sbjct: 72 IVACLQQAMADSQVRGVLLDIDSPGGQVAGAFDCADMIYRLRQQKPVWALCNDTACSAAM 131 Query: 113 LISCASNIIVAAETSLVGSIGVLFQY 138 L++ A + + +TS +GSIGV+ + Sbjct: 132 LLASACSRRLVTQTSRIGSIGVMMSH 157 >gi|126465069|ref|YP_001040178.1| nodulation efficiency protein NfeD [Staphylothermus marinus F1] gi|126013892|gb|ABN69270.1| Nodulation efficiency protein NfeD [Staphylothermus marinus F1] Length = 443 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 18/131 (13%) Query: 9 KTRYVMLSLVTLTVVY---FSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDD 64 K Y+ L L LT+ FS +H ++ + I G+I +Q L+E E +S + Sbjct: 3 KLFYIFLLLTILTISIKPVFSQETH------YIVTVNINGEINYGTQYLLE--EALSEAE 54 Query: 65 SATA-LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA---SAGYLISCASNI 120 A LI+ L +PGG + + + I+ + PVI V+ A SAG LI A++I Sbjct: 55 KLDAPLIMILDTPGGLLDSANNMIKLIRN--SNVPVIGYVYPAGAQAWSAGTLILLATHI 112 Query: 121 IVAAETSLVGS 131 A +L+G+ Sbjct: 113 AAMAPGTLIGA 123 >gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis ATCC 12228] gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis RP62A] gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis W23144] gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis BCM-HMP0060] gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis SK135] gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W2(grey)] gi|38257586|sp|Q8CTE0|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460168|sp|Q5HQW0|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis ATCC 12228] gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis RP62A] gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis W23144] gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis BCM-HMP0060] gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis SK135] gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W2(grey)] gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis FRI909] gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU144] gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU028] gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU045] Length = 194 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 34/192 (17%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIK-- 85 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS G + A G+ G F P + + + Sbjct: 86 PDVQTICIGMAASMGSFLLAA------------GAKGKRFALPNAEVMIHQ--------- 124 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P+ +E+ A +++ + R++SE +K +D T Sbjct: 125 --PLGGAQGQATEIEIAANHILK-----TREKLNRILSERTGQSIEKIQQDTDRDNFLTA 177 Query: 216 AEAKKVGLIDVV 227 AEAK+ GLID V Sbjct: 178 AEAKEYGLIDEV 189 >gi|297197433|ref|ZP_06914830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces sviceus ATCC 29083] gi|197716281|gb|EDY60315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces sviceus ATCC 29083] Length = 220 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 35/171 (20%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +S +D T + + ++SPGGS YAG AI+ ++ + N V T AAS G + C Sbjct: 64 LSAEDPRTDISLYINSPGGSVYAGLAIYDTMRLIPND--VSTLAMGFAASMGQFLLCG-- 119 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 G+ G + P + + + I + + + Sbjct: 120 ----------GTPGKRYALPNARIMMHQGSAGIGGTTAD----------------ILIQA 153 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTGAEAKKVGLIDVV 227 + +D S RL++E N + DG R +T EA++ G++D V Sbjct: 154 ENLDHSKQTMERLLAE--NTGQTPETIARDGDRDRWFTAEEAREYGMVDRV 202 >gi|115311350|sp|Q3M726|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 Length = 214 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +DS + + ++SPGGS YAG AI+ IQ++ R V+T +AAS G + A Sbjct: 62 EDSEKDIQLYINSPGGSVYAGMAIYDTIQQI--RPDVVTICFGLAASMGAFLLTAG 115 >gi|227818344|ref|YP_002822315.1| periplasmic serine protease [Sinorhizobium fredii NGR234] gi|227337343|gb|ACP21562.1| periplasmic serine protease [Sinorhizobium fredii NGR234] Length = 275 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E++ ++ ++ DD L+ L +PGG A I RA++ K + V V Sbjct: 67 INDSEEVLRAVQ-MTDDDVPLDLV--LHTPGGLVLAALQIARAVRNHKGK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV S++G I Sbjct: 122 AMSGGTLIALAADEIVMCRHSVLGPI 147 >gi|295132506|ref|YP_003583182.1| ATP-dependent Clp protease proteolytic subunit 2 [Zunongwangia profunda SM-A87] gi|294980521|gb|ADF50986.1| ATP-dependent Clp protease proteolytic subunit 2 [Zunongwangia profunda SM-A87] Length = 224 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 DS+ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DSSKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCA------ 137 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G+ G P+ + + + P+ S++ A +++ Sbjct: 138 ------GAEGKRSGLPHSRVMIHQ-----------PLGGAQGQASDIEITAREII----- 175 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDVV 227 + +++S+ Y+K SD W A+ AK+ G+ID + Sbjct: 176 TLKEELYKIISKHSGQSYEKVYEDSDRDYWMKADRAKEYGMIDEI 220 >gi|302869360|ref|YP_003837997.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] gi|315504165|ref|YP_004083052.1| endopeptidase clp [Micromonospora sp. L5] gi|302572219|gb|ADL48421.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] gi|315410784|gb|ADU08901.1| Endopeptidase Clp [Micromonospora sp. L5] Length = 213 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS Y+G AI+ +Q + N V T MAAS G L+ CA Sbjct: 73 INSPGGSVYSGMAIYDTMQYIDN--DVSTVAMGMAASMGQLLLCAG 116 >gi|332712287|ref|ZP_08432215.1| periplasmic serine protease, ClpP family [Lyngbya majuscula 3L] gi|332349093|gb|EGJ28705.1| periplasmic serine protease, ClpP family [Lyngbya majuscula 3L] Length = 294 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I R++ D LI L +PGG A E I RA+ +++ V V Sbjct: 71 IEDSEQVLRAI-RLTPPDVPIDLI--LHTPGGLVLATEQIARAL--IRHPSKVTVFVPHY 125 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G +++ AS+ IV +++G + Sbjct: 126 AMSGGTMLALASDEIVMDANAVLGPV 151 >gi|225416613|ref|ZP_03761802.1| hypothetical protein CLOSTASPAR_05837 [Clostridium asparagiforme DSM 15981] gi|225041859|gb|EEG52105.1| hypothetical protein CLOSTASPAR_05837 [Clostridium asparagiforme DSM 15981] Length = 293 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 39/224 (17%) Query: 31 VEDNSPH--VARIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSP 76 +E+N H + I I G++E + L + ++ +I DD+ L+V L++ Sbjct: 90 LEENRRHRKIHLITIIGEVEGHENLSGNSKATKYDHVLPQLAQIEDDDTVDGLLVLLNTS 149 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GG AG AI I + P ++ V + S G ++ ++N S + G + Sbjct: 150 GGDVDAGLAIAEMIASLS--MPTVSLVLGGSHSIGVPLAVSTNY------SFIVPSGTMM 201 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +P + G+ I S ++ F+ + + + ++ +Y L+ + Sbjct: 202 IHP-----VRMSGMVIGSSQTYEY------FAMIEDRILNFVESHARIAYDQLKELMHNT 250 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + D G + G EA + GLID VGG +E LY + Sbjct: 251 EMLTRDL------GTVLVGKEAVEAGLIDEVGGIKEALHKLYQM 288 >gi|70699878|gb|AAZ06847.1| ClpP1 [Microbacterium arborescens] Length = 194 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ E+ +I ++ +DS + + ++SPGGS AG AI+ +Q V N ++T MA Sbjct: 29 ENANEICAKILLLAAEDSEKDIYLYINSPGGSITAGMAIYDTMQFVPN--DIVTVGIGMA 86 Query: 108 ASAGYLISCAS 118 AS G L+ A Sbjct: 87 ASMGQLLLTAG 97 >gi|327404286|ref|YP_004345124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Fluviicola taffensis DSM 16823] gi|327319794|gb|AEA44286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Fluviicola taffensis DSM 16823] Length = 222 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D+ + + L+SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 82 DAKKDIQIYLNSPGGSVYAGLGIYDTMQYIK--PDVATICTGMAASMGAVLMCAG---AE 136 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S + V+ P LG + + + S E+ + +Q ++ Sbjct: 137 GKRSALKHARVMIHQP--------LGGA---------QGQASDI-EITAREIQKLKK--- 175 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +++ Y+K SD W T AEAK G++D + Sbjct: 176 ----ELYDIIATHSKQTYEKVWADSDRDYWMTAAEAKDYGMVDEI 216 >gi|238060619|ref|ZP_04605328.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] gi|237882430|gb|EEP71258.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] Length = 213 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS Y+G AI+ +Q + N V T MAAS G L+ CA Sbjct: 73 INSPGGSVYSGMAIYDTMQYIDN--DVSTVAMGMAASMGQLLLCAG 116 >gi|297526660|ref|YP_003668684.1| protein of unknown function DUF107 [Staphylothermus hellenicus DSM 12710] gi|297255576|gb|ADI31785.1| protein of unknown function DUF107 [Staphylothermus hellenicus DSM 12710] Length = 444 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 18/131 (13%) Query: 9 KTRYVMLSLVTLTVVY---FSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDD 64 K Y+ L L LTV + FS +H ++ + I G+I +Q L+E E + + Sbjct: 4 KLFYIFLLLTILTVSFKPVFSQETH------YIVTVNINGEINYGTQYLLE--EALGEAE 55 Query: 65 SATA-LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA---SAGYLISCASNI 120 A LI+ L +PGG + + + I+ + P+I V+ A SAG LI A+++ Sbjct: 56 KLDAPLIMILDTPGGLLDSANNMIKLIRN--SNVPIIGYVYPAGAQAWSAGTLILLATHV 113 Query: 121 IVAAETSLVGS 131 A +L+G+ Sbjct: 114 AAMAPGTLIGA 124 >gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC 7120] gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena variabilis ATCC 29413] gi|21759070|sp|Q8YQX8|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC 7120] gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena variabilis ATCC 29413] Length = 232 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +DS + + ++SPGGS YAG AI+ IQ++ R V+T +AAS G + A Sbjct: 80 EDSEKDIQLYINSPGGSVYAGMAIYDTIQQI--RPDVVTICFGLAASMGAFLLTAG 133 >gi|297562336|ref|YP_003681310.1| endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846784|gb|ADH68804.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 210 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 34/192 (17%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI GQ D + L+ + +S +D + + ++SPGGS AG AI+ +Q + N Sbjct: 35 RIVFLGQQVDDEIANRLVGELLLLSAEDRQRDITMYINSPGGSVTAGMAIYDVMQYIPN- 93 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS G ++ CA G+ G + P+ + + + I Sbjct: 94 -DVRTVGIGMAASMGQMLLCA------------GAPGKRYALPHTRVMMHQPSGGIGGTA 140 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S ++++ D + F+ +SE ++ +D W T Sbjct: 141 SD----------------IRILADQLLYVKKMFIEKISEHTGQTVEQIEKDADRDRWFTA 184 Query: 216 AEAKKVGLIDVV 227 E+K+ G ID V Sbjct: 185 KESKEYGFIDEV 196 >gi|119510658|ref|ZP_01629787.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414] gi|119464709|gb|EAW45617.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414] Length = 210 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG-YLISCAS 118 +DS + + ++SPGGS YAG AI+ +Q++ R V+T +AAS G +L++ S Sbjct: 58 EDSEKDIQIYINSPGGSVYAGMAIYDTMQQI--RPDVVTICFGLAASMGAFLLAAGS 112 >gi|87125532|ref|ZP_01081377.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp. RS9917] gi|86166832|gb|EAQ68094.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp. RS9917] Length = 200 Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + DDS+ + + ++SPGGS AG AI+ +Q VK Sbjct: 29 VERILFLGQEVNDGIANSLVAQMLYLDSDDSSKPIYLYINSPGGSVTAGLAIYDTMQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 S--DVVTICVGLAASMGAFLLAAGT 111 >gi|260890124|ref|ZP_05901387.1| hypothetical protein GCWU000323_01286 [Leptotrichia hofstadii F0254] gi|260860147|gb|EEX74647.1| protease IV [Leptotrichia hofstadii F0254] Length = 286 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 38/187 (20%), Positives = 86/187 (45%), Gaps = 7/187 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++++ + ++ D + +I+ + + E I + K+K K V+ + + + Sbjct: 72 QILQGLNNLAEDKNIKKVIIDVDKLNLTLSQLEEISKIFDKIKKNKEVVA-IGTLFEESR 130 Query: 112 YLISCASNIIVAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS- 168 Y + ++ I +T S + G L + Y+K FL+K G+ + + K +S Sbjct: 131 YREALLADKIFMFDTRQSTIIFRGYLHKEFYLKSFLEKFGIRMNVLHIGDYKVAGEKYSH 190 Query: 169 -EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDV 226 +++ + + ++++ D + FV LV R + + +LS I+ G +A + LID Sbjct: 191 NQMSEEKKESIKNIKDKVFEDFVELVKSKRGVDIENE-ILSGNLIFAGKKKALEYKLIDG 249 Query: 227 VGGQEEV 233 V +E+ Sbjct: 250 VADYDEI 256 >gi|163840396|ref|YP_001624801.1| ATP-dependent endopeptidase Clp proteolytic subunit [Renibacterium salmoninarum ATCC 33209] gi|162953872|gb|ABY23387.1| ATP-dependent endopeptidase clp proteolytic subunit [Renibacterium salmoninarum ATCC 33209] Length = 211 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 39/201 (19%) Query: 40 RIAIRG-QIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G +++D+ ++ ++ +S +D + + ++SPGGS AG AI+ + + N Sbjct: 33 RIVVLGTEVDDAVANRIVAQLLLLSAEDPRADISLYINSPGGSVSAGMAIYDTMMMIPNE 92 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS G ++ CA G+ G F P+ + + + I+ Sbjct: 93 --VGTLAMGLAASMGQILLCA------------GAAGKRFSLPHSRILMHQGSAGIQGTT 138 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDS--SYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + E+ + ++ ++D+V+ ++H + R+ SD W Sbjct: 139 AD---------VEIQEQNLRAIEDMVNGLLAHHTGHTIAEIERD---------SDRDHWF 180 Query: 215 GA-EAKKVGLID-VVGGQEEV 233 A EA++ G++D +VG E+ Sbjct: 181 SAEEARQYGMVDHLVGNLAEL 201 >gi|255020331|ref|ZP_05292399.1| Periplasmic serine proteases (ClpP class) [Acidithiobacillus caldus ATCC 51756] gi|254970251|gb|EET27745.1| Periplasmic serine proteases (ClpP class) [Acidithiobacillus caldus ATCC 51756] Length = 420 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 4/136 (2%) Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T+ GSIGV+ + + G+S + + K + P + + + +Q +D Sbjct: 163 TAEAGSIGVVAAHVDQSGADAQAGLSYTLLHAGEHKIDGHPHAPLPAEVAADIQADIDRL 222 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y FV LV+ R + + + + RI+ G A + GL D +G ++ +L AL + Sbjct: 223 YDQFVELVASHRRLDA-QAVRATQARIYRGQAALQAGLADRIGTLDD---ALAALQQRLA 278 Query: 246 IRKIKDWNPPKNYWFC 261 R D + P+ C Sbjct: 279 RRASADRSAPRLSHSC 294 >gi|325286841|ref|YP_004262631.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga lytica DSM 7489] gi|324322295|gb|ADY29760.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga lytica DSM 7489] Length = 226 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D++ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DASKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCAGE--KG 141 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + L S ++ Q P+ S++ A ++++ + D Sbjct: 142 KRSGLTHSRVMIHQ---------------------PLGGAQGQASDIEITAREILK-LKD 179 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVV 227 Y+ +++ +DK SD W A EAKK G+ID + Sbjct: 180 ELYN----IIATHSGQTFDKVSNDSDRDYWMKADEAKKYGMIDEI 220 >gi|294676957|ref|YP_003577572.1| S49 family peptidase [Rhodobacter capsulatus SB 1003] gi|294475777|gb|ADE85165.1| peptidase, S49 family [Rhodobacter capsulatus SB 1003] Length = 316 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I+ + +KPV V + A SA Y ++ + I+ T VGSIGV+ + + LD+ G Sbjct: 92 IRAARAQKPVQAFVADHALSAAYALASQAGRIILPRTGAVGSIGVVAMHSDMSGALDQKG 151 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-S 208 +++ + + K + +P+ + + ++ F V+E R D + L + Sbjct: 152 IAVTLIHAGARKVDANPYQPLPETIRARIAGELEDLRQLFAETVAEGRGRRLDTSRALDT 211 Query: 209 DGRIWTGAEAKKVGLIDVV 227 + ++ G A GL D V Sbjct: 212 EAAVFRGEAAVFAGLADEV 230 >gi|148555105|ref|YP_001262687.1| peptidase S14, ClpP [Sphingomonas wittichii RW1] gi|148500295|gb|ABQ68549.1| peptidase S14, ClpP [Sphingomonas wittichii RW1] Length = 688 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%) Query: 69 LIVSLSSPGGSAYAGEAIFRAI--QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 L V ++SPGG G AI+ AI ++ K RK V T + +AAS G +++ A IV A+ Sbjct: 33 LDVRINSPGGYVMEGLAIYNAIIRERGKGRK-VTTHIDGLAASMGSILAMAGEEIVMADN 91 Query: 127 SLV 129 +L+ Sbjct: 92 ALL 94 >gi|291557791|emb|CBL34908.1| ATP-dependent Clp protease proteolytic subunit ClpP [Eubacterium siraeum V10Sc8a] Length = 306 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 35/186 (18%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG--YLISCA 117 I +D S L++ L++ GG AG AI I + KP ++ V S G +S Sbjct: 74 IEQDMSIDGLLIILNTVGGDVEAGLAISELIAGMS--KPTVSIVVGGGHSIGVPLAVSAR 131 Query: 118 SNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + IV + T + + G+L P + +++ I + S + +P F E+ K Sbjct: 132 KSFIVPSATMTIHPVRMNGLLLGIPQTLSYFERMQERIINFVSKNSRIKPERFRELMMKK 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +++ DV G + G A GLID +GG + Sbjct: 192 DELVMDV----------------------------GSVLDGETAVNEGLIDSLGGLSDAV 223 Query: 235 QSLYAL 240 Q LY+L Sbjct: 224 QCLYSL 229 >gi|330469650|ref|YP_004407393.1| endopeptidase clp [Verrucosispora maris AB-18-032] gi|328812621|gb|AEB46793.1| endopeptidase clp [Verrucosispora maris AB-18-032] Length = 212 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS Y+G AI+ +Q + N V T MAAS G L+ CA Sbjct: 72 INSPGGSVYSGMAIYDTMQYIDN--DVSTVAMGMAASMGQLLLCAG 115 >gi|317403655|gb|EFV84143.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter xylosoxidans C54] Length = 369 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++VSL+SPGG + AI+ A+++ R V T V AASA LI+ A + ++ E + Sbjct: 52 IVVSLNSPGGDVFDALAIYNALRRYAGR--VTTRVDGFAASAASLIAMAGDQLIMPENA 108 >gi|238062970|ref|ZP_04607679.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] gi|237884781|gb|EEP73609.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] Length = 216 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 41/174 (23%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +S +D + + ++SPGGS AG AI+ +Q V N V T M AS G + CA Sbjct: 71 LSSEDPRADIQLYINSPGGSVTAGMAIYDTMQSVPN--DVATVAMGMTASMGQFLLCA-- 126 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 G+ G + P+ + + P S+V +A Q++ Sbjct: 127 ----------GARGKRYALPHASIMMHQ-----------PSGGIAGTASDVAIRAAQLL- 164 Query: 180 DVVDSSYHWFVRLVSESR-----NIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + + V + R P ++ SD W T EAK GLID V Sbjct: 165 ---------YTKRVCQERIAFHTGQPVERIEADSDRDRWFTAEEAKDYGLIDHV 209 >gi|186681335|ref|YP_001864531.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc punctiforme PCC 73102] gi|186463787|gb|ACC79588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc punctiforme PCC 73102] Length = 232 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + +DS + + ++SPGGS YAG AI+ IQ++ R V+T +AAS G + A Sbjct: 77 LDSEDSEKDIQMYVNSPGGSVYAGMAIYDTIQQI--RPDVVTICFGLAASMGAFLLTA 132 >gi|118431782|ref|NP_148461.2| hypothetical protein APE_2212.1 [Aeropyrum pernix K1] gi|116063104|dbj|BAA81224.2| conserved hypothetical protein [Aeropyrum pernix K1] Length = 292 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ +I I R + + ALI L +PGG A I RA+++ + RK VI V Sbjct: 73 IDDSEAVIRAI-RSTPPEKPIALI--LHTPGGLVLAASQIARALKRHRGRKIVI--VPHY 127 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ I +++G + Sbjct: 128 AMSGGTLIALAADEIRMDPNAVLGPL 153 >gi|120434592|ref|YP_860283.1| ATP-dependent Clp protease proteolytic subunit [Gramella forsetii KT0803] gi|117576742|emb|CAL65211.1| ATP-dependent Clp protease proteolytic subunit [Gramella forsetii KT0803] Length = 225 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D++ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DASKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCA------ 137 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 G G P+ + + + PM S++ A +++ Sbjct: 138 ------GEDGKRSGLPHSRVMIHQ-----------PMGGAQGQASDIEITAREIV----- 175 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDVV 227 + +++++ Y+K SD W AE AK+ G+ID + Sbjct: 176 TLKEELYKIIAKHSGQTYEKVHEDSDRDYWMKAEKAKEYGMIDEI 220 >gi|18310659|ref|NP_562593.1| Clp protease [Clostridium perfringens str. 13] gi|18145340|dbj|BAB81383.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 247 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 39/197 (19%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I ++D ++ L++ GG AG AI I+ +K KP ++ V S Sbjct: 75 EHMIPQLIDIEQNDRIKGILFVLNTVGGDVEAGLAIAEMIRSLK--KPTVSLVIGGGHSI 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK-AEPSPFSE 169 G ++ AS QY ++ P + I ++ + + P F+ Sbjct: 133 GVPLATAS------------------QYSFISPSATMI---IHPIRMNGLVIGVPQTFNY 171 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD------GRIWTGAEAKKVGL 223 N MQ+ ++ F+ SE + K ++ +D G I G EA K GL Sbjct: 172 FNK-----MQERIND----FIIRTSEIKLDVLKKMMMQTDELLNDMGTILVGEEAVKCGL 222 Query: 224 IDVVGGQEEVWQSLYAL 240 I+ VGG +E L +L Sbjct: 223 INEVGGVKEALDKLNSL 239 >gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp. PCC 6506] gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp. PCC 6506] Length = 197 Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 DDS + + ++SPGGS AG AIF +Q +K+ V+T AAS G + A Sbjct: 57 DDSTKPIFIYINSPGGSVTAGMAIFDTMQYIKSE--VVTMCVGQAASMGAFLLAAGT 111 >gi|305665189|ref|YP_003861476.1| ATP-dependent Clp protease proteolytic subunit 2 [Maribacter sp. HTCC2170] gi|88709941|gb|EAR02173.1| ATP-dependent Clp protease proteolytic subunit 2 [Maribacter sp. HTCC2170] Length = 226 Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 31/165 (18%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D++ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DASKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCAGE--KG 141 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + L S ++ Q PM S++ A ++++ Sbjct: 142 KRSGLTHSRVMIHQ---------------------PMGGAQGQASDIEITAREILK---- 176 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVV 227 +++S+ DK SD W A EAKK G+ID + Sbjct: 177 -LKEELYQIISKHSGQKLDKVHEDSDRDYWMKADEAKKYGMIDEI 220 >gi|320326645|gb|EFW82694.1| hypothetical phage-related protein [Pseudomonas syringae pv. glycinea str. B076] Length = 410 Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 40/70 (57%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D S ++I+++ SPGG A + I + RK ++ V ASA Y ++ A++ IV Sbjct: 94 DPSIKSIILNIDSPGGVAAGINELADQIHAGRARKRIVAYVGGTGASAAYWLASAASEIV 153 Query: 123 AAETSLVGSI 132 ET+L+GSI Sbjct: 154 IDETALLGSI 163 >gi|159039408|ref|YP_001538661.1| endopeptidase Clp [Salinispora arenicola CNS-205] gi|157918243|gb|ABV99670.1| Endopeptidase Clp [Salinispora arenicola CNS-205] Length = 213 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS Y+G AI+ +Q + N V T MAAS G L+ CA Sbjct: 73 INSPGGSVYSGMAIYDTMQFIDN--DVSTVAMGMAASMGQLLLCAG 116 >gi|256821432|ref|YP_003145395.1| hypothetical protein Kkor_0206 [Kangiella koreensis DSM 16069] gi|256794971|gb|ACV25627.1| protein of unknown function DUF107 [Kangiella koreensis DSM 16069] Length = 476 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 52/289 (17%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSA 66 + Y+ LS + L S ++ ++ + G + + L+E IE + D Sbjct: 3 QALYIALSFLLLCFSAQQLHSAETNSGKRAMQLTLDGSVNPATAHFLVENIEEAAAQDYQ 62 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASAGYLISCASNIIVA 123 +I+ +++PGG A I RAI + + PV T V+ AASAG I AS++ Sbjct: 63 L-IIIKMNTPGGLDLAMRDIIRAI--LSSPVPVATYVYPPGSRAASAGTYILYASHVSAM 119 Query: 124 AETSLVG-----SIGVLFQYPYVKPFLDKLGVSIKSVK----------------SSPMKA 162 A + +G SIG + P D+ S ++ + SP ++ Sbjct: 120 APATNLGAATPVSIGGM-------PSPDQPNQSEQNKEPNQDGADSEQSKDQPAQSPSQS 172 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 PS S + K + + + S H+ RNI + K V +G + +EA ++G Sbjct: 173 APSNKSAMEKKVINDAEAYLRSLAHY------HGRNIDWVKNAV-REGESLSSSEALEIG 225 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 +ID++ E Q L A+ +++R P + D K + I + Sbjct: 226 VIDLIA---ENPQQLLAMINGKTVRL------PSGQFEIDTKGMIIDEI 265 >gi|26989764|ref|NP_745189.1| ClpP protease, putative [Pseudomonas putida KT2440] gi|24984659|gb|AAN68653.1|AE016495_5 ClpP protease, putative [Pseudomonas putida KT2440] Length = 387 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 9/92 (9%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + I+ ++ I DD + ++V+ ++ GG + G AI A+ ++ R V +AAS Sbjct: 55 ANQFIQDLKAI--DDGTSPIVVAFNTNGGDLFEGLAIHNALSRLGER--CTGRVDALAAS 110 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AG + C ++ +V A ++ ++ PY Sbjct: 111 AGSVAVCGAHRVVMASNAM-----LMIHNPYT 137 >gi|167750805|ref|ZP_02422932.1| hypothetical protein EUBSIR_01787 [Eubacterium siraeum DSM 15702] gi|167656240|gb|EDS00370.1| hypothetical protein EUBSIR_01787 [Eubacterium siraeum DSM 15702] Length = 320 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 35/186 (18%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG--YLISCA 117 I +D S L++ L++ GG AG AI I + KP ++ V S G +S Sbjct: 88 IEQDMSIDGLLIILNTVGGDVEAGLAISELIAGMS--KPTVSIVVGGGHSIGVPLAVSAR 145 Query: 118 SNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + IV + T + + G+L P + +++ I + S + +P F E+ K Sbjct: 146 KSFIVPSATMTIHPVRMNGLLLGIPQTLSYFERMQERIINFVSKNSRIKPERFRELMMKK 205 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +++ DV G + G A GLID +GG + Sbjct: 206 DELVMDV----------------------------GSVLDGETAVNEGLIDSLGGLSDAV 237 Query: 235 QSLYAL 240 Q LY+L Sbjct: 238 QCLYSL 243 >gi|330970624|gb|EGH70690.1| peptidase S49 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 410 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 40/70 (57%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D S ++I+++ SPGG A + I + RK ++ V ASA Y ++ A++ IV Sbjct: 94 DPSIKSIILNIDSPGGVAAGINELADQIHAGRARKRIVAYVGGTGASAAYWLASAASEIV 153 Query: 123 AAETSLVGSI 132 ET+L+GSI Sbjct: 154 IDETALLGSI 163 >gi|289679276|ref|ZP_06500166.1| serine peptidase S49 family protein [Pseudomonas syringae pv. syringae FF5] Length = 112 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 44/82 (53%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +Q L ++ D S ++I+++ SPGG A + I + RK ++ V AS Sbjct: 31 TQVLATDLQSALDDPSIKSIILNIDSPGGVAAGINELADQIHAGRARKRIVAYVGGTGAS 90 Query: 110 AGYLISCASNIIVAAETSLVGS 131 A Y ++ A++ IV ET+L+GS Sbjct: 91 AAYWLASAASEIVIDETALLGS 112 >gi|297621676|ref|YP_003709813.1| ATP-dependent Clp protease proteolytic subunit [Waddlia chondrophila WSU 86-1044] gi|297376977|gb|ADI38807.1| ATP-dependent Clp protease proteolytic subunit [Waddlia chondrophila WSU 86-1044] Length = 196 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 37/194 (19%) Query: 40 RIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 R+ + Q+ E + E+I ++ + D ++ ++SPGGS +G AI+ +Q + + Sbjct: 27 RLFLSNQVDNETANEIIRKLWYLELKDPGKPILFVINSPGGSVDSGFAIWDQVQMISS-- 84 Query: 98 PVITEVHEMAASAGYLIS-CASNIIVAAETSLVGSIGVLFQYPYVKPFLDK--LGVSIKS 154 PV T V +AAS G ++S CA+ G + P + + + +G I+ Sbjct: 85 PVTTLVTGLAASMGSVLSLCAAK-------------GKRYVTPQARIMIHQPMIGGVIQG 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +++ + + + K V++ D Y R + D W Sbjct: 132 -QATDLDIQAREILKTREKLVRIYMDATGKDYETIDRAI---------------DRDTWM 175 Query: 215 GA-EAKKVGLIDVV 227 A EAK+ GLID + Sbjct: 176 SAEEAKEFGLIDAI 189 >gi|319953653|ref|YP_004164920.1| ATP-dependent clp protease proteolytic subunit [Cellulophaga algicola DSM 14237] gi|319422313|gb|ADV49422.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga algicola DSM 14237] Length = 226 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D++ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DASKDIQIYINSPGGSVYAGLGIYDTMQYIK--PDVATICTGMAASMGAVLLCAG 138 >gi|307128583|ref|YP_003880613.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia muelleri CARI] gi|306483045|gb|ADM89915.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia muelleri CARI] Length = 217 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 33/166 (19%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE-MAASAGYLISCASNIIV 122 DS + + ++SPGGS Y+G I+ +Q +K P I+ + +AAS ++ C+ Sbjct: 81 DSNKDIQIYINSPGGSVYSGLGIYDTMQILK---PEISTICTGIAASMAAILLCSGK--- 134 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + S++ VL P + +SS M E+ + + ++ + Sbjct: 135 KGKRSILKHSRVLIHQP----------IGYAKGQSSDM--------EITVREILKLKKEL 176 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 ++ ++SE N P++K SD W T EAK G++D + Sbjct: 177 NN-------IISEHTNQPFEKVQKDSDRDYWMTSEEAKNYGIVDEI 215 >gi|297303372|ref|XP_002806197.1| PREDICTED: Fanconi anemia group B protein-like isoform 2 [Macaca mulatta] gi|297303374|ref|XP_001099768.2| PREDICTED: Fanconi anemia group B protein-like isoform 1 [Macaca mulatta] Length = 859 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 39/204 (19%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 E+NS H++ + +DS++L+E+I DD+ L+V + + + + ++ Sbjct: 453 EENSVHISDEKLSDNFQDSEQLVEKIWYRVMDDT---LVVGVKTTSSLKLSLNDVTLSL- 508 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 ++ + H+ S L+ C + +I + F PY+KP D++G+ Sbjct: 509 -------LMDQAHD---SRFRLLKCQNRVIKLSTNP--------FPAPYLKP--DEIGLE 548 Query: 152 IKSVKSSPMKAEPSPFSEVNP---KAVQMMQDVVDSS----YHWFVRLV------SESRN 198 K VK +P + F +P + VQ++ V S + F V ES N Sbjct: 549 AKRVKLTPDSKKAESFVCEHPSKKECVQIITAVTSLSPLLAFSKFCCTVLLHIMERESGN 608 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVG 222 P D+ +V GR++ E G Sbjct: 609 CPKDRYVVC--GRVFLSLEDLSTG 630 >gi|145596011|ref|YP_001160308.1| endopeptidase Clp [Salinispora tropica CNB-440] gi|145305348|gb|ABP55930.1| Endopeptidase Clp [Salinispora tropica CNB-440] Length = 213 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS Y+G AI+ +Q + N V T MAAS G L+ CA Sbjct: 73 INSPGGSVYSGMAIYDTMQFIDN--DVSTVAMGMAASMGQLLLCAG 116 >gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806] Length = 233 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V T Sbjct: 67 QVADS--IVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVATICFG 122 Query: 106 MAASAGYLISCAS 118 +AAS G + C Sbjct: 123 LAASMGAFLLCGG 135 >gi|269121415|ref|YP_003309592.1| hypothetical protein Sterm_2817 [Sebaldella termitidis ATCC 33386] gi|268615293|gb|ACZ09661.1| hypothetical protein Sterm_2817 [Sebaldella termitidis ATCC 33386] Length = 174 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 22/105 (20%) Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 NPK + D ++ Y+ F +L++ P V+ +G I A++VG GQ Sbjct: 28 NPK--RFYPDYLEEHYYSFTKLIN-----P-----VIENGEIREMTRAERVG-----AGQ 70 Query: 231 EEVWQSLYALGVDQSIRK----IKDWNPPKNYWFCDLKNLSISSL 271 EE+ + Y G + I++ DWN KN W D K IS L Sbjct: 71 EELQEGEYFEGNEVKIKEKPSEFHDWNSQKNEWIHD-KEKEISVL 114 >gi|60683290|ref|YP_213434.1| hypothetical protein BF3847 [Bacteroides fragilis NCTC 9343] gi|60494724|emb|CAH09526.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 301 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 21/195 (10%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIER--ISRDD 64 K +T Y L L +F++S VE + I +R +E + I+++ + + RDD Sbjct: 53 KARTTY----LQHLADSFFNFSKKVETLKLYEIEIPMRQMVELADNCIDKLSKADLRRDD 108 Query: 65 SATALIVSLSSPGGSAYAG-EAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIV 122 L S+ S AG E + A+ K + +P + G IS N V Sbjct: 109 --IQLRKSVCSFTPEKMAGKEMLVGAVCTGKYDLRPDFNNFDRLTKDFGLGIS-PRNYDV 165 Query: 123 AA--ETSLVGSIGVL-------FQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 AA S G G++ F Y Y K +KLG S+K+ + +P+ A ++ + Sbjct: 166 AALLYISENGYAGLMEADHFHPFSYQYEFKELAEKLGDSMKARREAPLSAHDFGYAALQM 225 Query: 173 KAVQMMQDVVDSSYH 187 +A M +D++ S +H Sbjct: 226 EAKTMARDILQSEFH 240 >gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis aeruginosa NIES-843] gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis aeruginosa NIES-843] Length = 233 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V T Sbjct: 67 QVADS--IVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVATICFG 122 Query: 106 MAASAGYLISCAS 118 +AAS G + C Sbjct: 123 LAASMGAFLLCGG 135 >gi|310643050|ref|YP_003947808.1| protein [Paenibacillus polymyxa SC2] gi|309248000|gb|ADO57567.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 455 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 4/123 (3%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATA 68 T ++M+S++ L +VY S S+ + V I + +IE + +ER + D A Sbjct: 16 TLWIMISVLLLPLVY-SGSALAQTKGGAVFVIPVDQEIEQGLGKFMERGFAEAVDSKAGL 74 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ +++PGG E + + I+ + P + + AASAG I+ ++N I S+ Sbjct: 75 ILLDINTPGGRVDTAEKLGKLIKD--SPIPTVAYIKGEAASAGSYIALSANKIAMKPGSI 132 Query: 129 VGS 131 +G+ Sbjct: 133 IGA 135 >gi|209964620|ref|YP_002297535.1| enoyl-CoA hydratase [Rhodospirillum centenum SW] gi|209958086|gb|ACI98722.1| enoyl-CoA hydratase [Rhodospirillum centenum SW] Length = 269 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%) Query: 85 AIFRAIQK-----VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 A FR + VK R+PVI +VH MA +AG + + ++ VAAET+ + GV Sbjct: 91 ATFRQCARLMTTIVKLRQPVIAKVHAMATAAGCQLVASCDLAVAAETASFATPGV 145 >gi|152967460|ref|YP_001363244.1| endopeptidase Clp [Kineococcus radiotolerans SRS30216] gi|151361977|gb|ABS04980.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216] Length = 213 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 32/176 (18%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 ++ +D + + ++SPGGS AG +I+ +Q +K V T MAAS G + CA Sbjct: 60 LAAEDPDADIFMYINSPGGSVSAGMSIYDTMQYIK--PDVATIATGMAASMGQFLLCA-- 115 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 G+ G P+ K + + P+ S++ A Q++ Sbjct: 116 ----------GAAGKRSALPHAKIMMHQ-----------PLGGLGGSASDIKILAEQII- 153 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID-VVGGQEEV 233 ++ L+++ ++ SD W A EAK+ GLID VVG EV Sbjct: 154 ----ATKKQMAELIAQHSGQTFETITRDSDRDRWFSAQEAKEYGLIDHVVGHTSEV 205 >gi|108773205|ref|YP_635771.1| ATP-dependent Clp protease proteolytic subunit [Chara vulgaris] gi|122237366|sp|Q1ACH6|CLPP_CHAVU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|77157861|gb|ABA61902.1| proteolytic subunit 2 of clp protease [Chara vulgaris] Length = 219 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 34 NSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 N + R+ GQ D + +LI + ++ +D + + + ++SPGGS AG A+F A+ Sbjct: 25 NRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDSKEMFMYINSPGGSVVAGIAVFDAM 84 Query: 91 QKVKNRKPVITEVHEMAASAGYLI 114 Q V V T MAAS G I Sbjct: 85 QYVG--PDVTTICMGMAASMGSFI 106 >gi|110799331|ref|YP_696364.1| Clp protease [Clostridium perfringens ATCC 13124] gi|168211435|ref|ZP_02637060.1| clp protease [Clostridium perfringens B str. ATCC 3626] gi|168214490|ref|ZP_02640115.1| clp protease [Clostridium perfringens CPE str. F4969] gi|168216964|ref|ZP_02642589.1| clp protease [Clostridium perfringens NCTC 8239] gi|182626367|ref|ZP_02954121.1| clp protease [Clostridium perfringens D str. JGS1721] gi|110673978|gb|ABG82965.1| clp protease [Clostridium perfringens ATCC 13124] gi|170710555|gb|EDT22737.1| clp protease [Clostridium perfringens B str. ATCC 3626] gi|170714034|gb|EDT26216.1| clp protease [Clostridium perfringens CPE str. F4969] gi|177908318|gb|EDT70866.1| clp protease [Clostridium perfringens D str. JGS1721] gi|182380948|gb|EDT78427.1| clp protease [Clostridium perfringens NCTC 8239] Length = 229 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 39/197 (19%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I ++D ++ L++ GG AG AI I+ +K KP ++ V S Sbjct: 57 EHMIPQLIDIEQNDRIKGILFVLNTVGGDVEAGLAIAEMIRSLK--KPTVSLVIGGGHSI 114 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK-AEPSPFSE 169 G ++ AS QY ++ P + I ++ + + P F+ Sbjct: 115 GVPLATAS------------------QYSFISPSATMI---IHPIRMNGLVIGVPQTFNY 153 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD------GRIWTGAEAKKVGL 223 N MQ+ ++ F+ SE + K ++ +D G I G EA K GL Sbjct: 154 FNK-----MQERIND----FIIRTSEIKLDVLKKMMMQTDELLNDMGTILVGEEAVKCGL 204 Query: 224 IDVVGGQEEVWQSLYAL 240 I+ VGG +E L +L Sbjct: 205 INEVGGVKEALDKLNSL 221 >gi|330963905|gb|EGH64165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. actinidiae str. M302091] Length = 381 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 36/201 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + I+ ++ I DD + ++V+ ++ GG + G AI A+ ++ R + +AAS Sbjct: 53 ANQFIQDLKAI--DDGVSPIVVAFNTIGGDLFDGLAIHNALNRLGER--CTARIDALAAS 108 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 AG + +C ++ +V A +++ M P ++ Sbjct: 109 AGSVAACGAHRMVMASNAML------------------------------MIHNPWTYTA 138 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLV-SESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + + ++ + DV+D + + ++S +I + + + W T EA +GL D + Sbjct: 139 GDAEDLRKVADVLDQTLEAIIAAYKAKSPDIDEVELRRMVNAETWLTAPEALALGLADEI 198 Query: 228 GGQEEVWQSLYALGVDQSIRK 248 G EV L V Q R+ Sbjct: 199 GAGVEVKACLGQGAVIQRFRQ 219 >gi|330884894|gb|EGH19043.1| putative inner membrane peptidase [Pseudomonas syringae pv. glycinea str. race 4] Length = 42 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 28/38 (73%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 P+ + ++AAS GY+++C N I++A +++GSIGV+ Sbjct: 4 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVV 41 >gi|188997265|ref|YP_001931516.1| protein of unknown function DUF107 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932332|gb|ACD66962.1| protein of unknown function DUF107 [Sulfurihydrogenibium sp. YO3AOP1] Length = 429 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH---EMAASA 110 + RI + + SA A+I+ L +PGG + I + IQ K P I V+ AASA Sbjct: 36 VNRIVNTAEEKSAKAIILQLDTPGGLETSIREIIKTIQ--KTDIPFIVYVYPKGARAASA 93 Query: 111 GYLISCASNIIVAAETSLVGS 131 G +I+ ++++ A + +GS Sbjct: 94 GAIITISADVAAMAPATNIGS 114 >gi|116072309|ref|ZP_01469576.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. BL107] gi|116064831|gb|EAU70590.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. BL107] Length = 184 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D + L+ ++ + +DS+ + + ++SPGGS AG AIF IQ VK Sbjct: 13 VERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIFDTIQYVK 72 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 73 SE--VVTICVGLAASMGAFLLAAGT 95 >gi|332799059|ref|YP_004460558.1| hypothetical protein TepRe1_1105 [Tepidanaerobacter sp. Re1] gi|332696794|gb|AEE91251.1| protein of unknown function DUF107 [Tepidanaerobacter sp. Re1] Length = 445 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 33 DNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + S +V + +RG I++ I R R + + A ALI + +PGG + I AI Sbjct: 33 EASEYVYIVPVRGVIDNGLATFIIRGIREAEEMQAKALIFEIDTPGGEVGSAIKISNAI- 91 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 +K P ++ ++ A SAG +I+ +S I+A + +G+ Sbjct: 92 -LKTSIPTVSFINNEATSAGVIIAISSETIMAVPGATIGA 130 >gi|330719338|ref|ZP_08313938.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc fallax KCTC 3537] Length = 202 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I ++G++ED + ++ ++ + DS + + ++SPGGS AG AI ++ +K P Sbjct: 28 ILVQGEVEDQMATSIVAQLLFLEAQDSDKEISMYINSPGGSVTAGLAIVDTMRFIK--AP 85 Query: 99 VITEVHEMAASAGYLISCAS 118 V T V +AAS G +I+ + Sbjct: 86 VTTIVMGLAASMGTIIASSG 105 >gi|251797382|ref|YP_003012113.1| peptidase S14 ClpP [Paenibacillus sp. JDR-2] gi|247545008|gb|ACT02027.1| peptidase S14 ClpP [Paenibacillus sp. JDR-2] Length = 247 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + LI ++ ++ +++ L++ GG AG AI I + KP +T V S Sbjct: 69 EHLIPQLVAAEQNSKIEGILIVLNTVGGDVEAGLAIAEMISSLS--KPTVTLVLGGGHSI 126 Query: 111 GYLISCASNI--IVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G I+ A N+ I A T + I G++ P +LDK+ I Sbjct: 127 GVPIAVAGNMSFIAATATMTIHPIRLNGLVIGVPQTFEYLDKMQERIL------------ 174 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE-SRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 K V M +V + + + E +R+I G G++A K GLI Sbjct: 175 -------KFVTMHSNVTEEKFKELMFKTGELTRDI----------GTTVIGSDAVKYGLI 217 Query: 225 DVVGGQEEVWQSL 237 D VGG + + L Sbjct: 218 DAVGGLGDALREL 230 >gi|126663138|ref|ZP_01734136.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria bacterium BAL38] gi|126624796|gb|EAZ95486.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria bacterium BAL38] Length = 228 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D++ + + ++SPGGS YAG I+ +Q VK V T MAAS G ++ CA Sbjct: 91 DASKDISIYINSPGGSVYAGLGIYDTMQFVK--PDVATICTGMAASMGAVLLCAG 143 >gi|111221348|ref|YP_712142.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Frankia alni ACN14a] gi|111148880|emb|CAJ60559.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Frankia alni ACN14a] Length = 213 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 34/192 (17%) Query: 40 RIAIRGQI-EDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G + EDS + ++ ++ +D + + ++SPGGS AG AI+ +Q V+N Sbjct: 38 RIVFLGSVVEDSIANAICAQLLLLNAEDPTRDIFLYINSPGGSVSAGMAIYDTMQFVEND 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS G + CA G+ G + P+ + + + I Sbjct: 98 --VATVSLGLAASMGQFLLCA------------GAPGKRYSLPHARIMMHQPSGGIGGTA 143 Query: 157 SS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S ++AE +++ +MMQ+ + ++H + R+ D R +T Sbjct: 144 SDIAIQAEQMLYTK------RMMQERI--AFHTGQPIEQIERDSDRD--------RWFTA 187 Query: 216 AEAKKVGLIDVV 227 EAK G +D V Sbjct: 188 EEAKDYGFVDHV 199 >gi|148272644|ref|YP_001222205.1| ATP-dependent Clp protease proteolytic subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830574|emb|CAN01509.1| ATP-dependent protease, proteolytic subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 195 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ E+ +I ++ +DS + + ++SPGGS AG AI+ +Q V N ++T MA Sbjct: 29 DNANEICAKILLLAAEDSEKDIFLYINSPGGSITAGMAIYDTMQFVPN--DIVTVGIGMA 86 Query: 108 ASAGYLI 114 AS G L+ Sbjct: 87 ASMGQLL 93 >gi|86739912|ref|YP_480312.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Frankia sp. CcI3] gi|108935915|sp|Q2JDQ9|CLPP1_FRASC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|86566774|gb|ABD10583.1| ATP-dependent Clp protease proteolytic subunit ClpP [Frankia sp. CcI3] Length = 213 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 34/192 (17%) Query: 40 RIAIRGQI-EDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G + EDS + ++ ++ +D + + ++SPGGS AG AI+ +Q V+N Sbjct: 38 RIVFLGSVVEDSIANAICAQLLLLNAEDPTRDIFLYINSPGGSVSAGMAIYDTMQFVEND 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS G + CA G+ G + P+ + + + I Sbjct: 98 --VATVSLGLAASMGQFLLCA------------GASGKRYSLPHARIMMHQPSGGIGGTA 143 Query: 157 SS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S ++AE +++ +MMQ+ + ++H + R+ D R +T Sbjct: 144 SDIAIQAEQMLYTK------RMMQERI--AFHTGQPIEQIERDSDRD--------RWFTA 187 Query: 216 AEAKKVGLIDVV 227 EAK G +D V Sbjct: 188 EEAKDYGFVDHV 199 >gi|288870760|ref|ZP_06115192.2| periplasmic serine protease [Clostridium hathewayi DSM 13479] gi|288866022|gb|EFC98320.1| periplasmic serine protease [Clostridium hathewayi DSM 13479] Length = 314 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + + L + L +PGGS + EAI ++K K + V ++A SAG +++CA+ +I+ Sbjct: 94 ECSKGLDIILQTPGGSPASAEAIISYLRK-KFSNDIRVIVPQIAMSAGTMMACAAKVIIM 152 Query: 124 AETSLVGSIGVLFQ 137 S +G + F Sbjct: 153 GNQSSLGPVDPQFN 166 >gi|308069939|ref|YP_003871544.1| membrane-bound serine protease (ClpP class) [Paenibacillus polymyxa E681] gi|305859218|gb|ADM71006.1| Membrane-bound serine protease (ClpP class) [Paenibacillus polymyxa E681] Length = 455 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATA 68 T ++M+S++ L +V+ S S+ + V I + +IE + +ER + D A Sbjct: 16 TLWIMVSVLLLPLVH-SESAAAQTKGGAVFVIPVDQEIEQGLGKFMERGFAEAADSKAGL 74 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ +++PGG E + + I+ + P + + AASAG I+ ++N IV S+ Sbjct: 75 ILLDINTPGGRVDTAEKLGKLIKD--SPIPTVAYIRGEAASAGSYIALSANKIVMKPGSI 132 Query: 129 VGS 131 +G+ Sbjct: 133 IGA 135 >gi|170781893|ref|YP_001710225.1| ATP-dependent Clp protease proteolytic subunit [Clavibacter michiganensis subsp. sepedonicus] gi|169156461|emb|CAQ01609.1| ATP dependent Clp protease proteolytic subunit 1 [Clavibacter michiganensis subsp. sepedonicus] Length = 200 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ E+ +I ++ +DS + + ++SPGGS AG AI+ +Q V N ++T MA Sbjct: 34 DNANEICAKILLLAAEDSEKDIFLYINSPGGSITAGMAIYDTMQFVPN--DIVTVGIGMA 91 Query: 108 ASAGYLI 114 AS G L+ Sbjct: 92 ASMGQLL 98 >gi|254521421|ref|ZP_05133476.1| peptidase S49 [Stenotrophomonas sp. SKA14] gi|219719012|gb|EED37537.1| peptidase S49 [Stenotrophomonas sp. SKA14] Length = 434 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 36/67 (53%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 + + + DD+ T++I+ L +PGG A + I + + RKP+ V + A SAG+ + Sbjct: 92 DTFDELLNDDAVTSIILRLDTPGGMASGCFDLVDHIFEARGRKPLYALVDDHAYSAGFAL 151 Query: 115 SCASNII 121 A + I Sbjct: 152 GSACDEI 158 >gi|301385640|ref|ZP_07234058.1| hypothetical phage-related protein [Pseudomonas syringae pv. tomato Max13] Length = 410 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +I+++ SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L Sbjct: 100 IILNIDSPGGVAAGINELADQIHAGRARKSIVAYVGGTGASAAYWLASAASEIVIDETAL 159 Query: 129 VGSI 132 +GSI Sbjct: 160 LGSI 163 >gi|302061402|ref|ZP_07252943.1| hypothetical phage-related protein [Pseudomonas syringae pv. tomato K40] Length = 410 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +I+++ SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L Sbjct: 100 IILNIDSPGGVAAGINELADQIHAGRARKSIVAYVGGTGASAAYWLASAASEIVIDETAL 159 Query: 129 VGSI 132 +GSI Sbjct: 160 LGSI 163 >gi|308535182|ref|YP_002137523.2| ribonuclease, Rne/Rng family [Geobacter bemidjiensis Bem] gi|308052527|gb|ACH37727.2| ribonuclease, Rne/Rng family [Geobacter bemidjiensis Bem] Length = 919 Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG------- 77 + W + ++ H R I+ + QELI ++E+ RD+ +AL +S PG Sbjct: 79 WKWRDDIPEDQRH-RRPRIQEVLRRGQELIVQVEKGERDNKGSALTTYVSLPGRYMVLMP 137 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 GS AG I R ++ RK + + EMA GY Sbjct: 138 GSDSAG--ISRKVEGEGERKKLKEIIAEMAIPEGY 170 >gi|255326612|ref|ZP_05367689.1| Clp protease [Rothia mucilaginosa ATCC 25296] gi|283457916|ref|YP_003362518.1| protease subunit of ATP-dependent Clp protease [Rothia mucilaginosa DY-18] gi|255296352|gb|EET75692.1| Clp protease [Rothia mucilaginosa ATCC 25296] gi|283133933|dbj|BAI64698.1| protease subunit of ATP-dependent Clp protease [Rothia mucilaginosa DY-18] Length = 217 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +S +D + + ++SPGGS AG AI+ +Q + N V+T V MAAS G + A Sbjct: 66 LSAEDPEADIYLYINSPGGSVTAGMAIYDTMQLIPND--VVTVVTGMAASMGQFLLTAGT 123 Query: 120 I 120 I Sbjct: 124 I 124 >gi|126660899|ref|ZP_01731990.1| hypothetical protein CY0110_21440 [Cyanothece sp. CCY0110] gi|126617796|gb|EAZ88574.1| hypothetical protein CY0110_21440 [Cyanothece sp. CCY0110] Length = 217 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I R++ D+ LI L +PGG A E I RA+ +++ V V Sbjct: 6 IEDSEQVLRAI-RLTPPDTPIDLI--LHTPGGLVLATEQIARAL--IRHPSKVTVFVPHY 60 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G +++ A++ I+ +++G + Sbjct: 61 AMSGGTMLALAADEIIMDANAVLGPV 86 >gi|121534809|ref|ZP_01666629.1| protein of unknown function DUF107 [Thermosinus carboxydivorans Nor1] gi|121306604|gb|EAX47526.1| protein of unknown function DUF107 [Thermosinus carboxydivorans Nor1] Length = 436 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Query: 11 RYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIEDSQE-LIERIERISRDDSA 66 RY L++V L ++ FS+ + D+ V I I+G+I SQ L+ R+ + A Sbjct: 2 RYKPLAVVFLLILVFSFVEPTVLAADDRQPVLLIPIKGEINGSQAALVRRVLTEASAQKA 61 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + + GG AI I + P I V A SAG LI+ A IV A Sbjct: 62 QAVLIEIDTFGGLVDPAVAIRDII--IDYPLPTICYVKNRAWSAGALIALAHKHIVIAPG 119 Query: 127 SLVGS 131 +G+ Sbjct: 120 GSLGA 124 >gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CC9311] gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus sp. CC9311] Length = 200 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 33/194 (17%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + +DS+ + + ++SPGGS AG AI+ +Q VK Sbjct: 29 VERILFLGQDVNDGVANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIK 153 + V+T +AAS G + A G+ G P+ + + + LG + + Sbjct: 89 S--DVVTICVGLAASMGAFLLTA------------GTKGKRLALPHSRIMIHQPLGGTAQ 134 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 S E+ + + M+++++ S E D+ LS Sbjct: 135 RQASD---------IEIEAREILRMKEMLNRSMADMTGQSFEKIEKDTDRDYFLS----- 180 Query: 214 TGAEAKKVGLIDVV 227 AEAK GLID V Sbjct: 181 -AAEAKDYGLIDRV 193 >gi|86140705|ref|ZP_01059264.1| ATP-dependent Clp protease proteolytic subunit 2 [Leeuwenhoekiella blandensis MED217] gi|85832647|gb|EAQ51096.1| ATP-dependent Clp protease proteolytic subunit 2 [Leeuwenhoekiella blandensis MED217] Length = 237 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D++ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 99 DASKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCAG 151 >gi|257870013|ref|ZP_05649666.1| peptidase S14 [Enterococcus gallinarum EG2] gi|257804177|gb|EEV32999.1| peptidase S14 [Enterococcus gallinarum EG2] Length = 196 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 33/190 (17%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AIF + +K Sbjct: 30 IMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGLAIFDTMNFIK--AD 87 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V T V MAAS G + A G G F P + + + Sbjct: 88 VQTIVMGMAASMGSFLLTA------------GEKGKRFALPNAEIMIHQ----------- 124 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE 217 P+ +E+ A ++Q + +++SE P + +D T E Sbjct: 125 PLGGAQGQATEIEIAARHILQ-----TRERLNKILSERTGQPIEVIEKDTDRDNFMTAQE 179 Query: 218 AKKVGLIDVV 227 AK GLID + Sbjct: 180 AKDYGLIDEI 189 >gi|257458199|ref|ZP_05623353.1| Clp protease [Treponema vincentii ATCC 35580] gi|257444493|gb|EEV19582.1| Clp protease [Treponema vincentii ATCC 35580] Length = 202 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%) Query: 40 RIAIRGQIEDSQELIERIER----ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +I + G++ ++EL E++ R + D ++ + V + SPGG AG AIF I+ +K Sbjct: 32 QIILSGEV--NKELAEKVIRQLLILEADSASKPIYVYIDSPGGDVDAGFAIFDMIRFIK- 88 Query: 96 RKPVITEVHEMAASAGYLISCAS 118 PV T + ASAG LI A+ Sbjct: 89 -PPVYTVGMGLVASAGALILLAA 110 >gi|218247705|ref|YP_002373076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 8801] gi|257060958|ref|YP_003138846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 8802] gi|218168183|gb|ACK66920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 8801] gi|256591124|gb|ACV02011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 8802] Length = 229 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V T Sbjct: 62 QVADS--IVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVATICFG 117 Query: 106 MAASAGYLISCA 117 +AAS G + C Sbjct: 118 LAASMGAFLLCG 129 >gi|86130754|ref|ZP_01049353.1| ATP-dependent Clp protease proteolytic subunit [Dokdonia donghaensis MED134] gi|85818165|gb|EAQ39325.1| ATP-dependent Clp protease proteolytic subunit [Dokdonia donghaensis MED134] Length = 224 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D+ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DANKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCAG 138 >gi|312195810|ref|YP_004015871.1| endopeptidase Clp [Frankia sp. EuI1c] gi|311227146|gb|ADP80001.1| Endopeptidase Clp [Frankia sp. EuI1c] Length = 215 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 33/157 (21%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGGS AG AI+ +Q V+N V T +AAS G + CA G+ Sbjct: 75 INSPGGSVSAGMAIYDTMQFVEND--VATVSLGLAASMGQFLLCA------------GAA 120 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 G + P+ + + + I S ++AE +++ +MMQ+ + ++H Sbjct: 121 GKRYSLPHARIMMHQPSGGIGGTASDIAIQAEQMLYTK------RMMQERI--AFH---- 168 Query: 192 LVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 P D+ SD W T EAK G +D V Sbjct: 169 -----TGQPIDQIERDSDRDRWFTAEEAKDYGFVDHV 200 >gi|23008901|ref|ZP_00050152.1| hypothetical protein Magn03003892 [Magnetospirillum magnetotacticum MS-1] Length = 128 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 38/64 (59%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +ARI+I G I S+ + IER+ + ++VS+SSPGG+ E + R ++ + + Sbjct: 54 QIARISIGGFIAGSESTRKLIERVGDAKAVQGVVVSISSPGGTXTGSEELXRXLRALAAK 113 Query: 97 KPVI 100 KP++ Sbjct: 114 KPIV 117 >gi|315501699|ref|YP_004080586.1| endopeptidase clp [Micromonospora sp. L5] gi|315408318|gb|ADU06435.1| Endopeptidase Clp [Micromonospora sp. L5] Length = 196 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 14/98 (14%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ +I ++ +D+ + + ++SPGGS AG A++ ++ VKN V T MA S Sbjct: 39 ANQICAQILLLAAEDAERDIFLYINSPGGSVSAGMAVYDTMRYVKN--DVATLALGMAGS 96 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 G + CA G+ G F P+ + + + Sbjct: 97 MGQFLLCA------------GAAGKRFALPHSRIMMHQ 122 >gi|302865150|ref|YP_003833787.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] gi|302568009|gb|ADL44211.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] Length = 196 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 14/98 (14%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ +I ++ +D+ + + ++SPGGS AG A++ ++ VKN V T MA S Sbjct: 39 ANQICAQILLLAAEDAERDIFLYINSPGGSVSAGMAVYDTMRYVKN--DVATLALGMAGS 96 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 G + CA G+ G F P+ + + + Sbjct: 97 MGQFLLCA------------GAAGKRFALPHSRIMMHQ 122 >gi|254671316|emb|CBA08710.1| signal peptide peptidase SppA, 36K type [Neisseria meningitidis alpha153] Length = 129 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEA 218 K PFS P+ ++ ++++ + F++ V R + + + + GR++TGA+A Sbjct: 12 KGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADA 71 Query: 219 KKVGLIDVVG 228 KVGL+D +G Sbjct: 72 LKVGLVDGLG 81 >gi|332291467|ref|YP_004430076.1| Endopeptidase Clp [Krokinobacter diaphorus 4H-3-7-5] gi|332169553|gb|AEE18808.1| Endopeptidase Clp [Krokinobacter diaphorus 4H-3-7-5] Length = 224 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D+ + + ++SPGGS YAG I+ +Q +K V T MAAS G ++ CA Sbjct: 86 DANKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMGAVLLCAG 138 >gi|302549126|ref|ZP_07301468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces viridochromogenes DSM 40736] gi|302466744|gb|EFL29837.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces viridochromogenes DSM 40736] Length = 219 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 35/171 (20%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +S +D T + + ++SPGGS +AG AI+ +Q + N V T AAS G + C Sbjct: 63 LSAEDPRTDISLYINSPGGSVHAGLAIYDTMQLIPN--DVSTLAMGFAASMGQFLLC--- 117 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 VG+ G + P + + + I + +++ Sbjct: 118 ---------VGAPGKRYALPNARIMMHQGSAGIGGTTAD----------------IEIQA 152 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTGAEAKKVGLIDVV 227 + ++ + RL++E + + + DG R +T EA+ G++D V Sbjct: 153 ENLEHTKRTMERLIAE--HTGHCAQTISRDGDRDRWFTAEEARDYGIVDQV 201 >gi|126659496|ref|ZP_01730629.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. CCY0110] gi|126619230|gb|EAZ89966.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. CCY0110] Length = 201 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 34 QVADS--IVAQLLFLDAEDPEKDIQIYINSPGGSVYAGLAIYDTMQQI--RPDVVTICFG 89 Query: 106 MAASAG-YLISCASN 119 +AAS G +L+S + Sbjct: 90 LAASMGAFLLSGGTK 104 >gi|78779795|ref|YP_397907.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9312] gi|123969045|ref|YP_001009903.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. AS9601] gi|126696838|ref|YP_001091724.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9301] gi|157413876|ref|YP_001484742.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9215] gi|254526963|ref|ZP_05139015.1| Clp protease [Prochlorococcus marinus str. MIT 9202] gi|115311346|sp|Q319H4|CLPP2_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|78713294|gb|ABB50471.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prochlorococcus marinus str. MIT 9312] gi|123199155|gb|ABM70796.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. AS9601] gi|126543881|gb|ABO18123.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9301] gi|157388451|gb|ABV51156.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9215] gi|221538387|gb|EEE40840.1| Clp protease [Prochlorococcus marinus str. MIT 9202] Length = 203 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + DD++ + + ++SPGGS AG AI+ I+ VK Sbjct: 29 VERILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIKYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCAS 118 + V+T +AAS G + A Sbjct: 89 S--DVVTICVGLAASMGAFLLAAG 110 >gi|150024898|ref|YP_001295724.1| S49 family serine protease [Flavobacterium psychrophilum JIP02/86] gi|149771439|emb|CAL42908.1| Putative S49 family serine protease [Flavobacterium psychrophilum JIP02/86] Length = 294 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 39/218 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + E++ ++ + D+ A + + SPGGS A +A FR K K KP++ V + S Sbjct: 94 ADEIVAQLYKAQEMDNVDATVFRIDSPGGSTKAIDA-FREFSKYKT-KPIVGLVKD-GLS 150 Query: 110 AGY--LISCASNIIVAAE-TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 GY I I+ + +S GSIGV+ + L+ G+ I + Sbjct: 151 LGYWAAIEVCDYIMADGDVSSRFGSIGVVASFRDNTKALEVAGIKIHEIYP--------- 201 Query: 167 FSEVNPKAVQMMQDVVDS---SYHWFVR-------------LVSESRNIPYDKTLVLSDG 210 P++ +DV D+ Y ++ ++S+ N+ ++ ++ +G Sbjct: 202 -----PESNHKNKDVKDARSGDYEGIIKNSLSPLAGMFQGGVISKRPNLIKEEGVL--NG 254 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 ++ EA ++GLID +G Q L + QS+ K Sbjct: 255 GVYFAKEALRLGLIDGIGDSRMAIQKAKQLAL-QSVSK 291 >gi|328954279|ref|YP_004371613.1| protein of unknown function DUF114 [Desulfobacca acetoxidans DSM 11109] gi|328454603|gb|AEB10432.1| protein of unknown function DUF114 [Desulfobacca acetoxidans DSM 11109] Length = 275 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + DS++++ I D L + + +PGG A I RAI + + V V Sbjct: 68 VNDSEQVLRAIHLT---DPEVPLDIIMHTPGGLVLASMQIARAIHRHPGKTTVF--VPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGV-LFQYP 139 A S G LI+ A++ IV E +++G + L Q+P Sbjct: 123 AMSGGTLIALAADEIVMCEDAVLGPVDPQLGQFP 156 >gi|294499121|ref|YP_003562821.1| enoyl-CoA hydratase/isomerase family protein [Bacillus megaterium QM B1551] gi|294349058|gb|ADE69387.1| enoyl-CoA hydratase/isomerase family protein [Bacillus megaterium QM B1551] Length = 267 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 52/202 (25%) Query: 50 SQELIER----IERISRDDSATALIV-----SLSSPGGSAYAGEA----IFRAIQKVKN- 95 S+E+IE+ I++ D+S +I+ S S+ G G+A ++ I ++ Sbjct: 37 SEEMIEKLTAEIKQAQSDESIKVVILNGAGRSFSAGGDVKTMGQASGPDVYEHIGRLNEC 96 Query: 96 -------RKPVITEVHEMAASAGYLISCASNIIVAAETSL-------VGSI----GVLFQ 137 KP+I+ VH AA A + ++ AS+ I+A+E S VG I G+ F Sbjct: 97 ILAMQNLEKPIISAVHGFAAGAAFNLALASDFIIASEESRFVLSFSQVGLISDGGGLYFL 156 Query: 138 YPYVKP-------FLD---------KLGVSIKSVKSSPMKAEPSPF----SEVNPKAVQM 177 V P FL K G + V + +K E + F S+ KA Sbjct: 157 TKVVGPHRAKELLFLGEPMDADTAYKAGFLNRVVSLNQLKDEVTSFASRLSQGPTKAYGK 216 Query: 178 MQDVVDSSYHWFVRLVSESRNI 199 M+ +V+ S+H + V E + Sbjct: 217 MKKIVNDSFHLTLEQVLEQERL 238 >gi|108804374|ref|YP_644311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter xylanophilus DSM 9941] gi|116243164|sp|Q1AVS9|CLPP_RUBXD RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|108765617|gb|ABG04499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter xylanophilus DSM 9941] Length = 200 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 33/190 (17%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D Q ++ ++ + +D + + ++SPGGS AG AI+ +Q VK Sbjct: 34 RIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVSAGLAIYDTMQFVK-- 91 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 ++T MAAS G + A G+ G F P + L + V + + Sbjct: 92 PDIVTTALGMAASMGAFLLAA------------GTKGKRFALPNTRILLHQPAVGGLAGQ 139 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + S+V A ++++ + ++SE PYDK +D GA Sbjct: 140 A----------SDVEIHARELIR-----TKRRLNEILSEHTGQPYDKIERDTDRDFIMGA 184 Query: 217 -EAKKVGLID 225 EA + GLID Sbjct: 185 EEAIEYGLID 194 >gi|134097946|ref|YP_001103607.1| ATP-dependent Clp protease proteolytic subunit 1 [Saccharopolyspora erythraea NRRL 2338] gi|291009144|ref|ZP_06567117.1| ATP-dependent Clp protease proteolytic subunit 1 [Saccharopolyspora erythraea NRRL 2338] gi|133910569|emb|CAM00682.1| ATP-dependent Clp protease proteolytic subunit 1 [Saccharopolyspora erythraea NRRL 2338] Length = 192 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 34/190 (17%) Query: 40 RIAIRG-QIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G Q+EDS ++ ++ ++ +D + + ++SPGGS AG AI+ +Q ++ Sbjct: 22 RIIVLGSQVEDSIANQICSQLILLAAEDPERDISLYINSPGGSVPAGMAIYDTMQLIQ-- 79 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T AAS G + A G+ G F P+ + + + I Sbjct: 80 PDVATVAMGFAASMGQFLLSA------------GARGKRFALPHARIMMHQPSAGIGGTA 127 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + +V + L++E P +K SD W T Sbjct: 128 SD----------------IAIQAEVFAKNKREMAELIAEQTGQPIEKIEADSDRDKWFTA 171 Query: 216 AEAKKVGLID 225 EA+ G +D Sbjct: 172 EEARDYGFVD 181 >gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] Length = 237 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 ++SPGGS YAG AI+ IQ++ R V+T +AAS G + A Sbjct: 95 INSPGGSVYAGMAIYDTIQQI--RPDVVTICFGLAASMGAFLLTA 137 >gi|182416350|ref|YP_001821416.1| endopeptidase Clp [Opitutus terrae PB90-1] gi|177843564|gb|ACB77816.1| Endopeptidase Clp [Opitutus terrae PB90-1] Length = 216 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E ++++ E++ + D + ++SPGGS AG A+F ++ + + P+ V MA Sbjct: 60 ETAKDMTEKLLYLEAVDPGKEITFYINSPGGSITAGMAVFDTMRLITS--PITVIVTGMA 117 Query: 108 ASAGYLISCAS 118 AS G ++ C + Sbjct: 118 ASMGSILLCGA 128 >gi|218440073|ref|YP_002378402.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp. PCC 7424] gi|218172801|gb|ACK71534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 7424] Length = 229 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 5/78 (6%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 AI + DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 58 AIDDNVADS--IVAQLLYLDAEDPEKDIQIYINSPGGSVYAGLAIYDTMQQI--RPDVVT 113 Query: 102 EVHEMAASAG-YLISCAS 118 +AAS G +L+S + Sbjct: 114 ICFGLAASMGAFLLSGGA 131 >gi|213966160|ref|ZP_03394346.1| Clp protease [Corynebacterium amycolatum SK46] gi|213951175|gb|EEB62571.1| Clp protease [Corynebacterium amycolatum SK46] Length = 190 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 33/185 (17%) Query: 46 QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 Q++D + +L ++ ++ +D + + + ++SPGGS AG AI+ +Q V V T Sbjct: 27 QVDDEIANKLCGQMLLLAAEDPESDISLYINSPGGSVTAGMAIYDTMQFVPC--DVATYG 84 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS G + A G+ G + P+ + + + I Sbjct: 85 MGLAASMGQFLLAA------------GAKGKRYALPHARIMMHQPSAGIGGTA------- 125 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVG 222 S++ +A Q ++ RL+++ P ++ SD W T AEAK+ G Sbjct: 126 ----SDITIQAEQFA-----ATKKEMARLIAQHTGQPVERIEEDSDRDRWFTAAEAKEYG 176 Query: 223 LIDVV 227 L+D V Sbjct: 177 LVDHV 181 >gi|311896032|dbj|BAJ28440.1| putative ATP-dependent Clp protease proteolytic subunit [Kitasatospora setae KM-6054] Length = 216 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 31/156 (19%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGGS AG AI+ +Q +KN V+T MAAS G + A G+ Sbjct: 72 INSPGGSISAGMAIYDTMQYIKND--VVTIAMGMAASMGQFLLTA------------GAK 117 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G F P + + P +++ +A Q+++ + L Sbjct: 118 GKRFSLPNANILMHQ-----------PSAGLGGSATDIRIQAEQLLR-----TKKRMSEL 161 Query: 193 VSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +++ +D+ SD W T EAK GLID + Sbjct: 162 IAQHSGQSFDQITADSDRDRWFTPEEAKAYGLIDEI 197 >gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] Length = 236 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS YAG AI+ IQ++ R V+T +AAS G + A Sbjct: 94 INSPGGSVYAGMAIYDTIQQI--RPDVVTICFGLAASMGAFLLTAG 137 >gi|167824886|ref|ZP_02456357.1| peptidase S14, ClpP [Burkholderia pseudomallei 9] gi|226198878|ref|ZP_03794441.1| peptidase S14, ClpP [Burkholderia pseudomallei Pakistan 9] gi|225928978|gb|EEH25002.1| peptidase S14, ClpP [Burkholderia pseudomallei Pakistan 9] Length = 364 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 39/206 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 W + VA I I I D+Q + +++ ++ D A+++ V+++S GG + Sbjct: 8 WDIRAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAAD--ASSITVAINSMGGDVFD 65 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 AI+ A+++ + V V +AASA L+ A + I E +L ++ +P+ Sbjct: 66 AFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL-----LMIHHPHT- 117 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + K ++ + +++D++ + ++ + D Sbjct: 118 ------------------------VAAGESKDLRRVAELLDNASAGILAAYAQRSGLSED 153 Query: 203 KTLVLSDGRIW-TGAEAKKVGLIDVV 227 + D W T A+AK+ G DV+ Sbjct: 154 DVRAMMDAETWLTAAQAKEKGFCDVI 179 >gi|83766223|dbj|BAE56366.1| unnamed protein product [Aspergillus oryzae] Length = 267 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 33 DNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 D SP I + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + Sbjct: 75 DQSPQERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTM 134 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASN 119 + + PV T AAS G L+ C + Sbjct: 135 TYIAS--PVSTICVGQAASMGSLLLCGGH 161 >gi|170016746|ref|YP_001727665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leuconostoc citreum KM20] gi|259585959|sp|B1MXG9|CLPP_LEUCK RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|169803603|gb|ACA82221.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leuconostoc citreum KM20] Length = 200 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 17/154 (11%) Query: 41 IAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + ++G++EDS ++ ++ + D + + ++SPGGS AG +I + +K P Sbjct: 28 VLVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIK--AP 85 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKS 157 V T V +AAS G +I+ + G G F P + + + +G ++ + Sbjct: 86 VTTIVMGLAASMGTIIASS------------GEKGHRFMLPNAEYLIHQPMGGAVGGTQQ 133 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 + M ++ K +++ D D R Sbjct: 134 TDMAIIAEQLTKTRDKLNKILADASDRDLETIAR 167 >gi|237803423|ref|ZP_04591008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025405|gb|EGI05461.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. oryzae str. 1_6] Length = 381 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 36/201 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + I+ ++ I DD + +I + ++ GG + G AI A+ ++ R + +AAS Sbjct: 53 ANQFIQDLKAI--DDGVSPIIAAFNTIGGDLFDGLAIHNALNRLGER--CTARIDALAAS 108 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 AG + +C ++ +V A +++ M P ++ Sbjct: 109 AGSVAACGAHRMVMASNAML------------------------------MIHNPWTYTA 138 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLV-SESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + + ++ + DV+D + + ++S NI + + + W T EA +GL D + Sbjct: 139 GDAEDLRKVADVLDQTLEAIIAAYKAKSPNIDEVELRRMVNAETWLTAPEALALGLADEI 198 Query: 228 GGQEEVWQSLYALGVDQSIRK 248 G EV L Q R+ Sbjct: 199 GAGVEVKACLGQGAAIQRFRQ 219 >gi|226227816|ref|YP_002761922.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas aurantiaca T-27] gi|226091007|dbj|BAH39452.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas aurantiaca T-27] Length = 204 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++SPGGS AG A++ +Q +K PV T MAAS G + CA Sbjct: 66 INSPGGSVSAGLAMYDTMQFIK--APVYTTCMGMAASMGAFLLCAG 109 >gi|71028320|ref|XP_763803.1| ATP-dependent Clp protease proteolytic subunit [Theileria parva strain Muguga] gi|68350757|gb|EAN31520.1| ATP-dependent Clp protease proteolytic subunit, putative [Theileria parva] Length = 241 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ D S ++I I RI+ +D + ++SPGGS AG AIF ++ +K P Sbjct: 78 IFLSGELNDKVSFKIISSILRINENDPNLPIKFYINSPGGSVTAGLAIFDVLRSLK--MP 135 Query: 99 VITEVHEMAASAGYLI 114 V T AAS G + Sbjct: 136 VETVSLGQAASMGAFL 151 >gi|219124070|ref|XP_002182335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406296|gb|EEC46236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 214 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 34/198 (17%) Query: 34 NSPHVARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 N + RI G +I+D + ++I + + +DS+ + + ++SPGGS +G AIF A+ Sbjct: 36 NRLYRERIIFLGAEIDDELANQVIGVMLYLDSEDSSKPIYLYINSPGGSVISGLAIFDAM 95 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 Q +K+ VIT +AAS G I A GS G P Sbjct: 96 QHIKSE--VITINLGLAASMGSFILGA------------GSKGKRLALP----------- 130 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSD 209 S +++ PM ++ +A Q+M+ + D+ + + ++++ I D L Sbjct: 131 SSRTMIHQPMGGAQGQAEDIKVEAAQIMR-IRDNLVKSYSMMTGQTQDRIIQD----LDR 185 Query: 210 GRIWTGAEAKKVGLIDVV 227 + EA + GL+D V Sbjct: 186 DNFMSAQEAMEYGLVDRV 203 >gi|169625037|ref|XP_001805923.1| hypothetical protein SNOG_15785 [Phaeosphaeria nodorum SN15] gi|160705586|gb|EAT76880.2| hypothetical protein SNOG_15785 [Phaeosphaeria nodorum SN15] Length = 228 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 41 IAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++EDS +I ++ + ++ + + ++SPGGS AG AI+ + + R P Sbjct: 53 ITLNGEVEDSMSAVVIAQLLFLEAENPEKPISMYINSPGGSVSAGLAIYDTMNYI--RSP 110 Query: 99 VITEVHEMAASAGYLI 114 V T MAAS G L+ Sbjct: 111 VSTTCMGMAASMGSLL 126 >gi|167893326|ref|ZP_02480728.1| peptidase S14, ClpP [Burkholderia pseudomallei 7894] Length = 358 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 35/180 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + +++ I+ D A+++ V+++S GG + AI+ A+++ + V V +AA Sbjct: 36 DAQNFVSQLDAIATD--ASSITVAINSMGGDVFDAFAIYNALRRYAGK--VKGRVDGIAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA L+ A + I E +L ++ +P+ + Sbjct: 92 SAASLVLMACDEIEMPENAL-----LMIHHPHT-------------------------VA 121 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 K ++ + +++D++ + ++ + D + D W T A+AK+ G DV+ Sbjct: 122 AGESKDLRRVAELLDNASAGILAAYAQRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|124025671|ref|YP_001014787.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL1A] gi|123960739|gb|ABM75522.1| Clp protease subunit [Prochlorococcus marinus str. NATL1A] Length = 205 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 DD + + ++SPGGS Y G IF +Q VK + T +AAS G + CA Sbjct: 61 DDPDKDIFLYINSPGGSVYDGLGIFDTMQHVK--PDIHTVCVGLAASMGAFLLCAG 114 >gi|72382132|ref|YP_291487.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL2A] gi|115311342|sp|Q46L44|CLPP1_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|72001982|gb|AAZ57784.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prochlorococcus marinus str. NATL2A] Length = 196 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 DD + + ++SPGGS Y G IF +Q VK + T +AAS G + CA Sbjct: 52 DDPDKDIFLYINSPGGSVYDGLGIFDTMQHVK--PDIHTVCVGLAASMGAFLLCAG 105 >gi|148258948|ref|YP_001243533.1| hypothetical protein BBta_7800 [Bradyrhizobium sp. BTAi1] gi|146411121|gb|ABQ39627.1| hypothetical protein BBta_7800 [Bradyrhizobium sp. BTAi1] Length = 276 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + DS++++ I ++ DD L + L +PGG A I RAI+ K + V V Sbjct: 67 VNDSEDVLRAIH-MTDDD--VPLDIVLHTPGGLVLAALQIARAIRAHKAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV S++G I Sbjct: 122 AMSGGTLIALAADEIVMCRHSVLGPI 147 >gi|317970581|ref|ZP_07971971.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CB0205] Length = 200 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 38 VARIAIRG-QIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D+ L+ ++ + DD++ + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGSEVNDAIANSLVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCAS 118 + V+T +AAS G + A Sbjct: 89 SD--VVTICVGLAASMGAFLLGAG 110 >gi|306818243|ref|ZP_07451973.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris ATCC 35239] gi|304648982|gb|EFM46277.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris ATCC 35239] Length = 206 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 31/181 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ + ++ ++ +D + + + ++SPGGS AG AI+ +Q +K V+T MA Sbjct: 45 ENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYDTMQYIK--PDVVTVTMGMA 102 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS G + A G+ G F P+ + + + P+ Sbjct: 103 ASMGQFLLTA------------GAKGKRFATPHARILMHQ-----------PLGGVQGTA 139 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 SEV A D++ + + ++ +E ++ +D W T EA + G ID Sbjct: 140 SEVRINA-----DLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDA 194 Query: 227 V 227 V Sbjct: 195 V 195 >gi|269976479|ref|ZP_06183464.1| Clp protease [Mobiluncus mulieris 28-1] gi|307701829|ref|ZP_07638843.1| endopeptidase Clp [Mobiluncus mulieris FB024-16] gi|269935280|gb|EEZ91829.1| Clp protease [Mobiluncus mulieris 28-1] gi|307613087|gb|EFN92342.1| endopeptidase Clp [Mobiluncus mulieris FB024-16] Length = 197 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 31/181 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ + ++ ++ +D + + + ++SPGGS AG AI+ +Q +K V+T MA Sbjct: 36 ENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYDTMQYIK--PDVVTVTMGMA 93 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS G + A G+ G F P+ + + + P+ Sbjct: 94 ASMGQFLLTA------------GAKGKRFATPHARILMHQ-----------PLGGVQGTA 130 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 SEV A D++ + + ++ +E ++ +D W T EA + G ID Sbjct: 131 SEVRINA-----DLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDA 185 Query: 227 V 227 V Sbjct: 186 V 186 >gi|213971971|ref|ZP_03400069.1| bacteriophage-related protein [Pseudomonas syringae pv. tomato T1] gi|213923286|gb|EEB56883.1| bacteriophage-related protein [Pseudomonas syringae pv. tomato T1] Length = 381 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +I+++ SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L Sbjct: 71 IILNIDSPGGVAAGINELADQIHAGRARKSIVAYVGGTGASAAYWLASAASEIVIDETAL 130 Query: 129 VGSI 132 +GSI Sbjct: 131 LGSI 134 >gi|153813468|ref|ZP_01966136.1| hypothetical protein RUMOBE_03888 [Ruminococcus obeum ATCC 29174] gi|149830412|gb|EDM85504.1| hypothetical protein RUMOBE_03888 [Ruminococcus obeum ATCC 29174] Length = 193 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 31/166 (18%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +D + + + ++SPGGS AG AI+ ++ +K V T MAAS G + Sbjct: 54 EDPSKDIQLYINSPGGSVTAGMAIYDTMKYIKC--DVSTICLGMAASMGAFLLAG----- 106 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 G+ G F P+ S+ M +PS ++ +Q++ D + Sbjct: 107 -------GTKGKRFALPH----------------STIMIHQPSGGAQGQATEIQIVADHI 143 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVV 227 + +++E+ PY+ +D T EAK GLID V Sbjct: 144 AQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEAKAYGLIDGV 189 >gi|311107208|ref|YP_003980061.1| Clp protease family protein [Achromobacter xylosoxidans A8] gi|310761897|gb|ADP17346.1| Clp protease family protein [Achromobacter xylosoxidans A8] Length = 279 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 ++RI+ R A + V+++SPGG+ + G AI+ A+++ K + V +V +AASA + Sbjct: 62 VKRIQAALRSVGARDVTVNVNSPGGNFFEGVAIYNALREHKAK--VTIKVLGLAASAASV 119 Query: 114 ISCASNIIVAAETSLV 129 I+ A + I+ + S + Sbjct: 120 IAMAGDDILMGQGSFL 135 >gi|227874919|ref|ZP_03993071.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243] gi|227844496|gb|EEJ54653.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243] Length = 206 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 31/181 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ + ++ ++ +D + + + ++SPGGS AG AI+ +Q +K V+T MA Sbjct: 45 ENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYDTMQYIK--PDVVTVTMGMA 102 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS G + A G+ G F P+ + + + P+ Sbjct: 103 ASMGQFLLTA------------GAKGKRFATPHARILMHQ-----------PLGGVQGTA 139 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 SEV A D++ + + ++ +E ++ +D W T EA + G ID Sbjct: 140 SEVRINA-----DLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDA 194 Query: 227 V 227 V Sbjct: 195 V 195 >gi|330948407|gb|EGH48667.1| peptidase S49, SppA [Pseudomonas syringae pv. pisi str. 1704B] Length = 85 Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYD 202 +DKLGV ++ S KA PF Q Q V+D+++ F+ V + R + Sbjct: 12 MDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQFIASVKQGRGDRLKDK 71 Query: 203 KTLVLSDGRIWTG 215 + L G IWTG Sbjct: 72 EHPELFSGLIWTG 84 >gi|302386512|ref|YP_003822334.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1] gi|302197140|gb|ADL04711.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1] Length = 260 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 55/228 (24%) Query: 34 NSPHVARIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSPGGSAY 81 N + I I G++E + L + ++ I DDS L+V L++ GG Sbjct: 61 NKRKIHLITIIGEVEGHENLSGNSKATKYDHILPKLAEIEDDDSVEGLLVLLNTSGGDVD 120 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AG AI EM AS L ++++ S+ + V Y ++ Sbjct: 121 AGLAIA-----------------EMIAS---LSIPTVSLVLGGSHSIGVPLAVCTDYSFI 160 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 P + I V+ + M S E +M+QD + + VS I Y Sbjct: 161 VPTGTMM---IHPVRMTGMVIGASQTYEY----FEMIQDRI-------LSFVSNHAKIAY 206 Query: 202 D--KTLVLSD-------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 D K L+L+ G + G E K GLI+ VGG ++ + LY L Sbjct: 207 DQLKRLMLNTEMLTRDLGTVLVGEETVKEGLINEVGGIKDALKKLYEL 254 >gi|285017855|ref|YP_003375566.1| enoyl-CoA hydratase/isomerase [Xanthomonas albilineans GPE PC73] gi|283473073|emb|CBA15578.1| hypothetical enoyl-coa hydratase/isomerase; protein [Xanthomonas albilineans] Length = 265 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 27/163 (16%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATAL 69 L L T + +W S D++ VA ++ G +D +EL R+ A A Sbjct: 28 LDLATHAALADAWDSFERDDTLWVAVLSGSGARAFSVGQDLKELAARLH-------AGAP 80 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-- 127 S S G + R ++ + KPVI +V+ +A G+ ++ A +IIVAA+T+ Sbjct: 81 SSSFGSHGAPGWP-----RLTERFELCKPVIAKVNGLALGGGFELALACDIIVAADTAEF 135 Query: 128 --------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 L+ G +F+ P+ +G + + +A Sbjct: 136 ALPEARLGLIPGAGGVFRLTRQLPYRTAMGYLLSGRRMDAARA 178 >gi|167948599|ref|ZP_02535673.1| hypothetical protein Epers_19523 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 59 Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 18/31 (58%), Positives = 23/31 (74%) Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVL 135 +M AS GY I+ A++ I A E S+VGSIGVL Sbjct: 4 DMCASGGYYIAAAADEIYADEGSIVGSIGVL 34 >gi|238062482|ref|ZP_04607191.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] gi|237884293|gb|EEP73121.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] Length = 212 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++ ++ ++ +DS + + ++SPGGS AG A++ ++ V+N V T MA Sbjct: 53 ESANQICAQLLLLAAEDSERDIHLYINSPGGSVSAGMAVYDTMRYVRN--DVATLALGMA 110 Query: 108 ASAGYLISCASN 119 S G + CA Sbjct: 111 GSMGQFLLCAGT 122 >gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002] gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002] Length = 197 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 5/78 (6%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 AI + DS ++ ++ + +D+ + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 37 AIDDTVADS--VVAQLLFLDAEDADKDIQLYINSPGGSVYAGMAIYDTMQQI--RPNVVT 92 Query: 102 EVHEMAASAG-YLISCAS 118 + +AAS G +L+S + Sbjct: 93 ICYGIAASMGAFLLSGGT 110 >gi|297561130|ref|YP_003680104.1| nitrite reductase (NAD(P)H), large subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845578|gb|ADH67598.1| nitrite reductase (NAD(P)H), large subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 833 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 V + V+ ++D D++ HW + +V E YD+ + S + GA A+ + L D+ G Sbjct: 12 VGHRLVEALRDR-DTAGHWHITVVGEEPRTAYDRVALSS---YFDGASAQDLSLGDLSGP 67 Query: 230 QEEVWQSLYALGVDQSIRKI 249 +V + A+G+D++ R + Sbjct: 68 HVDVHVNERAVGIDRASRTV 87 >gi|78185116|ref|YP_377551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CC9902] gi|124013823|sp|Q3AVC3|CLPP3_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|78169410|gb|ABB26507.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus sp. CC9902] Length = 200 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 SE--VVTICVGLAASMGAFLLAAGT 111 >gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus N315] gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MW2] gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus COL] gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus RF122] gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus JH9] gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus JH1] gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit homologue [Staphylococcus aureus subsp. aureus Mu3] gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus TCH130] gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053] gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322] gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397] gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus E1410] gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876] gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781] gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A9763] gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719] gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9635] gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9299] gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A8115] gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6300] gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6224] gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5948] gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5937] gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30] gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3] gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ED98] gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117] gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus C160] gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260] gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WBG10049] gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M899] gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139] gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427] gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765] gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101] gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102] gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp. aureus H19] gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus A017934/97] gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus 132] gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424] gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809] gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M1015] gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754] gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819] gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MR1] gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796] gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MN8] gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus TCH70] gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54036854|sp|P63786|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|54036862|sp|P99089|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|54040892|sp|P63785|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|56748671|sp|Q6GB62|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|56748685|sp|Q6GIM3|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460165|sp|Q5HHQ0|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|90183185|sp|Q2YSF8|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|116243169|sp|Q2G036|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|124013828|sp|Q2FIM5|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166214713|sp|A7WZR9|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|172048797|sp|A6QF76|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082468|sp|A6TZP7|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082469|sp|A5IQX2|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082470|sp|A8Z045|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315] gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue [Staphylococcus aureus subsp. aureus Mu50] gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2] gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus COL] gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus RF122] gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus JH9] gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus JH1] gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue [Staphylococcus aureus subsp. aureus Mu3] gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus TCH130] gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053] gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322] gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397] gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus E1410] gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876] gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781] gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A9763] gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719] gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9635] gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9299] gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A8115] gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6300] gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6224] gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5948] gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5937] gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3] gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30] gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ED98] gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit [Staphylococcus aureus subsp. aureus TW20] gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101] gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427] gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139] gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M899] gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WBG10049] gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260] gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102] gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765] gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus C160] gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117] gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp. aureus H19] gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ST398] gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus A017934/97] gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus 04-02981] gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M1015] gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424] gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809] gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754] gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819] gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16] gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796] gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MN8] gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ED133] gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus TCH70] gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus JKD6159] gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus TCH60] gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus CGS03] gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus CGS00] gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus CGS01] gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus MRSA131] gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus MRSA177] gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus O11] gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus O46] gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus T0131] gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21189] gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21172] gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21193] Length = 195 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 34/192 (17%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIK-- 85 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS G + A G+ G F P + + + Sbjct: 86 PDVQTICIGMAASMGSFLLAA------------GAKGKRFALPNAEVMIHQ--------- 124 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P+ +E+ A +++ + R++SE +K +D T Sbjct: 125 --PLGGAQGQATEIEIAANHILK-----TREKLNRILSERTGQSIEKIQKDTDRDNFLTA 177 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 EEAKEYGLIDEV 189 >gi|297616393|ref|YP_003701552.1| hypothetical protein Slip_0188 [Syntrophothermus lipocalidus DSM 12680] gi|297144230|gb|ADI00987.1| protein of unknown function DUF107 [Syntrophothermus lipocalidus DSM 12680] Length = 463 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSLS 74 S + T +Y + ++ V D + V I G + + +ER+ ++ ATA ++ L+ Sbjct: 39 SHLAFTDMYSAKAAVVRDANSFVLVADITGPVVPVTARFVERVISLAEQKGATACVLQLN 98 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM---AASAGYLISCASNIIVAAETSLVGS 131 +PGG + I Q + +R PV+ VH A SAG I+ ++++ + + +G+ Sbjct: 99 TPGGLYTTTQEIVA--QILNSRVPVVVFVHPQGGWAGSAGTFITISAHVAAMSPGTRIGA 156 >gi|288555734|ref|YP_003427669.1| hypothetical protein BpOF4_13630 [Bacillus pseudofirmus OF4] gi|288546894|gb|ADC50777.1| hypothetical protein BpOF4_13630 [Bacillus pseudofirmus OF4] Length = 446 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDS 65 I +++ +++ + + F +S + V I + +E ++R + + D+ Sbjct: 7 NISLLFILCAMLLIPLQSFVYSETNTSDDTVVYYIPVEQTVERGLAAFMQRSFQSAADEG 66 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A +++ + +PGG+ A I R +Q P+I V + A SAG I+ ++ IV A Sbjct: 67 ADYIVLEIHTPGGAVDAAGEIARLMQNTD--IPIIAFVTKEAISAGAYIALNADEIVMAP 124 Query: 126 TSLVGSIGVL 135 + +G+ GV+ Sbjct: 125 GTTMGAAGVI 134 >gi|158317030|ref|YP_001509538.1| endopeptidase Clp [Frankia sp. EAN1pec] gi|158112435|gb|ABW14632.1| Endopeptidase Clp [Frankia sp. EAN1pec] Length = 213 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 33/184 (17%) Query: 47 IEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 +EDS + ++ ++ +D + + ++SPGGS AG AI+ +Q V+N V T Sbjct: 46 VEDSIANAICAQLLLLNAEDPERDIFLYINSPGGSVSAGMAIYDTMQYVEND--VATVSL 103 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAE 163 +AAS G + CA G+ G + P+ + + + I S ++AE Sbjct: 104 GLAASMGQFLLCA------------GAPGKRYSLPHARIMMHQPSGGIGGTASDIAIQAE 151 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 +++ +MMQ+ + ++H + R+ D R +T EAK G Sbjct: 152 QMLYTK------RMMQERI--AFHTGQPVEQIERDSDRD--------RWFTADEAKDYGF 195 Query: 224 IDVV 227 +D V Sbjct: 196 VDHV 199 >gi|217072528|gb|ACJ84624.1| unknown [Medicago truncatula] Length = 238 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + I G I D + ++ ++ + ++ + + + L+SPGG+ AG AI+ +Q + R P Sbjct: 56 VCINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYI--RSP 113 Query: 99 VITEVHEMAASAGYLISCAS 118 + T AAS G L+ CA Sbjct: 114 INTICLGQAASMGSLLLCAG 133 >gi|86741151|ref|YP_481551.1| enoyl-CoA hydratase [Frankia sp. CcI3] gi|86568013|gb|ABD11822.1| short chain enoyl-CoA hydratase [Frankia sp. CcI3] Length = 265 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 Q+L ER E R AT SL S G + R ++ KPVI V+ A Sbjct: 65 GQDLKERAELTERGTPAT----SLGSRGQPGWP-----RLTERFTLSKPVIARVNGYALG 115 Query: 110 AGYLISCASNIIVAAETSLVG 130 G+ ++ A ++IVAAE ++ G Sbjct: 116 GGFELALACDLIVAAEHAVFG 136 >gi|196229320|ref|ZP_03128185.1| peptidase S49 [Chthoniobacter flavus Ellin428] gi|196226552|gb|EDY21057.1| peptidase S49 [Chthoniobacter flavus Ellin428] Length = 269 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D E+ E I + A+++ + SPGG+ + A+ + K V Sbjct: 77 DMDEISEAINEAGDREDVQAVLLDIDSPGGTVTGTPELAAAVAALSRAKYVYAFSDGQMC 136 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 SA Y I+ +++I + ++ VGSIGVL P LD+ Sbjct: 137 SAAYWIASQADVIFSTPSARVGSIGVLL------PMLDE 169 >gi|203284651|ref|YP_002222391.1| ATP-dependent Clp protease proteolytic component [Borrelia duttonii Ly] gi|203288184|ref|YP_002223199.1| ATP-dependent Clp protease proteolytic component [Borrelia recurrentis A1] gi|201084094|gb|ACH93685.1| ATP-dependent Clp protease proteolytic component [Borrelia duttonii Ly] gi|201085404|gb|ACH94978.1| ATP-dependent Clp protease proteolytic component [Borrelia recurrentis A1] Length = 196 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 41 IAIRGQIE-DSQELI-ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I I G+I+ D+ +L E+I + DS + V + S GG AG AIF I+ V R Sbjct: 25 IVITGEIDKDTSKLFQEKILFLEASDSTKPIFVYIDSEGGDIDAGFAIFNMIRFV--RPK 82 Query: 99 VITEVHEMAASAGYLISCASN 119 V T + ASAG LI A++ Sbjct: 83 VFTIGVGLVASAGALIFLAAD 103 >gi|298248117|ref|ZP_06971922.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963] gi|297550776|gb|EFH84642.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963] Length = 183 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%) Query: 24 YFSWSSHVEDNSPHVAR---IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGG 78 Y + S H+ SP + + I IEDS +I ++ + +D+ + + L+SPGG Sbjct: 5 YTAISKHL---SPQFLKKFILCINTAIEDSVANSIITQLFYLQSEDATRDIHLYLNSPGG 61 Query: 79 SAYAGEAIFRAIQKVK 94 + YAG AI+ AIQ ++ Sbjct: 62 NIYAGLAIYDAIQSLR 77 >gi|156564664|gb|ABU80635.1| exfoliative toxin [Staphylococcus intermedius] Length = 48 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 S++SPGG Y + ++ I++VK+ K + ++ +AAS GY IS Sbjct: 1 SVNSPGGGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISA 46 >gi|33866183|ref|NP_897742.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 8102] gi|67460509|sp|Q7U5Q2|CLPP3_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|33639158|emb|CAE08164.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp. WH 8102] Length = 200 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 SE--VVTICVGLAASMGAFLLAAGT 111 >gi|220918516|ref|YP_002493820.1| protein of unknown function DUF114 [Anaeromyxobacter dehalogenans 2CP-1] gi|219956370|gb|ACL66754.1| protein of unknown function DUF114 [Anaeromyxobacter dehalogenans 2CP-1] Length = 339 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +ED Q L+E ++ +A + + L SPGGSA A EAI ++ + VI V Sbjct: 67 MEDLQGLMEVFHGLA---AAKGVDLILHSPGGSAEAAEAIVNYMRSKFSDVRVI--VPHA 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLF 136 A SA +++C+ + ++ + S +G I F Sbjct: 122 AMSAATMLACSGDRLLMGKHSFLGPIDPQF 151 >gi|315499702|ref|YP_004088505.1| endopeptidase clp [Asticcacaulis excentricus CB 48] gi|315417714|gb|ADU14354.1| Endopeptidase Clp [Asticcacaulis excentricus CB 48] Length = 209 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 31/156 (19%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG + AI+ +Q +K+ PV T MAASAG LI A G Sbjct: 73 INSPGGQVTSALAIYDTMQYIKS--PVTTVCMGMAASAGSLILQA------------GEA 118 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G P S M +PS + +++ + + + + Sbjct: 119 GQRISLP----------------NSKIMVHQPSGGARGMASDIEIQAEDIRKTKKLLNEI 162 Query: 193 VSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLIDVV 227 + PYD L R T AEAK+ GLID V Sbjct: 163 YVKHTGQPYDVIERTLDRDRYMTAAEAKEFGLIDHV 198 >gi|167725633|ref|ZP_02408869.1| peptidase S14, ClpP [Burkholderia pseudomallei DM98] Length = 366 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 41/204 (20%), Positives = 87/204 (42%), Gaps = 39/204 (19%) Query: 29 SHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + S VA I I I D+Q + +++ ++ D A+++ V+++S GG + Sbjct: 12 AQAQAGSGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAAD--ASSITVAINSMGGDVFDAF 69 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI+ A+++ + V V +AASA L+ A + I E +L ++ +P+ Sbjct: 70 AIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL-----LMIHHPHT--- 119 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + K ++ + +++D++ + ++ + D Sbjct: 120 ----------------------VAAGESKDLRRVAELLDNASAGILAAYAQRSGLSEDDV 157 Query: 205 LVLSDGRIW-TGAEAKKVGLIDVV 227 + D W T A+AK+ G DV+ Sbjct: 158 RAMMDAETWLTAAQAKEKGFCDVI 181 >gi|326330783|ref|ZP_08197084.1| Clp protease [Nocardioidaceae bacterium Broad-1] gi|325951313|gb|EGD43352.1| Clp protease [Nocardioidaceae bacterium Broad-1] Length = 222 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 37/172 (21%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +S +D + + ++SPGGS AG AI+ + + N V T +AAS G + CA Sbjct: 66 LSAEDPEADIFLHINSPGGSVDAGMAIYDTMNYIPN--DVATVGMGLAASMGQFLLCA-- 121 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 G+ G + P+ + + + P S++ +A Q Sbjct: 122 ----------GAKGKRYALPHARIMMHQ-----------PSSGMGGSASDIKIQAQQ--- 157 Query: 180 DVVDSSYHW---FVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 S H + L+SE ++ V +D W T AEA GL+D V Sbjct: 158 -----SLHIKKVLLELISEHTGQSVEQVTVDADRDRWFTAAEALDYGLVDQV 204 >gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 7822] gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 7822] Length = 228 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 5/78 (6%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 AI + DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 58 AIDDNVADS--IVAQLLYLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVVT 113 Query: 102 EVHEMAASAG-YLISCAS 118 +AAS G +L+S + Sbjct: 114 ICFGLAASMGAFLLSGGT 131 >gi|91216686|ref|ZP_01253651.1| ATP-dependent Clp protease proteolytic subunit 2 [Psychroflexus torquis ATCC 700755] gi|91185155|gb|EAS71533.1| ATP-dependent Clp protease proteolytic subunit 2 [Psychroflexus torquis ATCC 700755] Length = 224 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE-MAASAGYLISCAS 118 DS+ + + ++SPGGS YAG I+ +Q + KP + ++ +AAS G ++ CA Sbjct: 86 DSSKDIQIYINSPGGSVYAGLGIYDTMQFI---KPDVATINTGIAASMGAVLLCAG 138 >gi|78212384|ref|YP_381163.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CC9605] gi|124013824|sp|Q3ALC4|CLPP3_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|78196843|gb|ABB34608.1| Endopeptidase Clp [Synechococcus sp. CC9605] Length = 200 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 SE--VVTICVGLAASMGAFLLAAGT 111 >gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501] gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501] Length = 262 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 95 QVADS--IVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVVTICFG 150 Query: 106 MAASAG-YLISCAS 118 +AAS G +L+S + Sbjct: 151 LAASMGAFLLSGGT 164 >gi|320161999|ref|YP_004175224.1| hypothetical protein ANT_25980 [Anaerolinea thermophila UNI-1] gi|319995853|dbj|BAJ64624.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1] Length = 447 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 10/106 (9%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSS-----HVEDNSPHVARIAIRGQIEDS-QELIERIE 58 ++ + R + LV L + ++W + + P V + + G + QE ++R Sbjct: 3 VEDVMGRLNWVRLVVLGLFLWAWLGTASPMQAQSDVPVVVTVRLEGALNPIWQETLKRAM 62 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV 103 R++ D A ALI+ L +PGG + + R +Q+++N PV+ V Sbjct: 63 RVAEDRGAEALILQLDTPGGQI---DVMNRLVQQIRNSPMPVVVYV 105 >gi|226940574|ref|YP_002795648.1| Periplasmic serine proteases (ClpP class) [Laribacter hongkongensis HLHK9] gi|226715501|gb|ACO74639.1| Periplasmic serine proteases (ClpP class) [Laribacter hongkongensis HLHK9] Length = 421 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 64/138 (46%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 RD A+++ + SPGG A+ ++ KPV +E A SA Y I+ + + + Sbjct: 111 RDQDVRAVLLEIDSPGGEVAGLFALCDRLKAAATSKPVWAYANEAACSAAYAIASSVDRL 170 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 T++VGSIGV+ + G + V + KA+ + + ++ +A +Q Sbjct: 171 YLPRTAMVGSIGVIAMHVDQSARDATQGYTYTPVFAGDKKADGNSHAPLSDRARTTLQTE 230 Query: 182 VDSSYHWFVRLVSESRNI 199 +D Y FV V+ R + Sbjct: 231 IDRLYSMFVDHVATGRRL 248 >gi|150004717|ref|YP_001299461.1| hypothetical protein BVU_2178 [Bacteroides vulgatus ATCC 8482] gi|149933141|gb|ABR39839.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 263 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 5/75 (6%) Query: 118 SNIIVAAETSLVGSIGVLFQYPY-----VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++++ +E G + + +P+ + +KLG SIK+ +S+PM + ++ + Sbjct: 115 ASLLYISENGYAGHVAADYFHPFSYEYEFRDLAEKLGDSIKARQSAPMSSHDFGYAALQM 174 Query: 173 KAVQMMQDVVDSSYH 187 +A M +D++ S +H Sbjct: 175 EAKAMARDILQSEFH 189 >gi|260436469|ref|ZP_05790439.1| Clp protease [Synechococcus sp. WH 8109] gi|260414343|gb|EEX07639.1| Clp protease [Synechococcus sp. WH 8109] Length = 200 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 SE--VVTICVGLAASMGAFLLAAGT 111 >gi|288924566|ref|ZP_06418503.1| Clp protease [Prevotella buccae D17] gi|315607428|ref|ZP_07882424.1| ATP-dependent Clp protease proteolytic subunit [Prevotella buccae ATCC 33574] gi|288338353|gb|EFC76702.1| Clp protease [Prevotella buccae D17] gi|315250860|gb|EFU30853.1| ATP-dependent Clp protease proteolytic subunit [Prevotella buccae ATCC 33574] Length = 222 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D + + L+SPGGS AG I+ +Q V + V T MAAS +A Sbjct: 83 DPGKDISIYLNSPGGSVTAGLGIYDTMQFVSS--DVATICTGMAAS------------MA 128 Query: 124 AETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A + G G P+ + + + LG ++ + S E+ K +Q + Sbjct: 129 AVLLVAGKEGKRQALPHSRVMIHQPLG---------GVQGQASDI-EIEAKEIQKFK--- 175 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 ++SE + P+DK SD W T EAK+ G+ID+V Sbjct: 176 ----KELYNIISEHSHTPFDKVWQDSDRNYWMTADEAKEYGMIDMV 217 >gi|300173717|ref|YP_003772883.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc gasicomitatum LMG 18811] gi|299888096|emb|CBL92064.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc gasicomitatum LMG 18811] Length = 200 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 17/146 (11%) Query: 41 IAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I ++G++EDS ++ ++ + D + + ++SPGGS AG +I + +K P Sbjct: 28 ILVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIK--AP 85 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKS 157 V T V +AAS G +I+ + G G F P + + + +G ++ + Sbjct: 86 VTTIVMGLAASMGTIIASS------------GEKGHRFMLPNAEYLIHQPMGGAVGGTQQ 133 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVD 183 + M ++ K +++ D D Sbjct: 134 TDMAIIADQLTKTRAKLNKILADASD 159 >gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9303] gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9303] Length = 200 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 31/193 (16%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK Sbjct: 29 VERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+T +AAS G + A G+ G P+ + + + Sbjct: 89 S--DVVTICVGLAASMGAFLLTA------------GTKGKRLALPHSRIMIHQPLGGTNQ 134 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 ++S + E+ + + ++D+++ S E D+ LS Sbjct: 135 RQASDI--------EIEAREILRIKDMLNHSMAELTGQTFEKIEKDTDRDYFLS------ 180 Query: 215 GAEAKKVGLIDVV 227 AEAK GLID V Sbjct: 181 AAEAKDYGLIDRV 193 >gi|39996024|ref|NP_951975.1| ribonuclease, Rne/Rng family protein [Geobacter sulfurreducens PCA] gi|39982789|gb|AAR34248.1| ribonuclease, Rne/Rng family protein [Geobacter sulfurreducens PCA] Length = 808 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 18/113 (15%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNS----PHVARIAIRGQIEDSQELIERIERISRDDSA 66 R L + + ++ W S + + S P + + RGQ ELI ++E+ RD Sbjct: 65 RLGFLQMGEIHPSFWQWRSDIPEESRSRRPRIQEVIRRGQ-----ELIVQVEKGERDMKG 119 Query: 67 TALIVSLSSPG-------GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 AL +S PG GS AG I R ++ +RK + +V E+ GY Sbjct: 120 AALTTYMSFPGRYMVLMPGSDSAG--ISRKVESESDRKKLKEKVAELEIPEGY 170 >gi|323359780|ref|YP_004226176.1| protease subunit of ATP-dependent Clp protease [Microbacterium testaceum StLB037] gi|323276151|dbj|BAJ76296.1| protease subunit of ATP-dependent Clp protease [Microbacterium testaceum StLB037] Length = 194 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ E+ +I ++ +D + + ++SPGGS AG AI+ +Q V N ++T MA Sbjct: 29 ENANEICAKILLLAAEDPQKDIYLYINSPGGSITAGMAIYDTMQFVPN--DIVTVGIGMA 86 Query: 108 ASAGYLI 114 AS G L+ Sbjct: 87 ASMGQLL 93 >gi|295704449|ref|YP_003597524.1| enoyl-CoA hydratase/isomerase family protein [Bacillus megaterium DSM 319] gi|294802108|gb|ADF39174.1| enoyl-CoA hydratase/isomerase family protein [Bacillus megaterium DSM 319] Length = 257 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 52/202 (25%) Query: 50 SQELIER----IERISRDDSATALIV-----SLSSPGGSAYAGEA----IFRAIQKVKN- 95 S+E+IE+ I++ D+S +I+ S S+ G G+A ++ I ++ Sbjct: 27 SEEMIEKLTAEIKQAQSDESIKVVILNGAGRSFSAGGDIKTMGQASGSDVYEHIGRLNEC 86 Query: 96 -------RKPVITEVHEMAASAGYLISCASNIIVAAETSL-------VGSI----GVLFQ 137 KP+I+ VH AA A + ++ AS+ I+A+E S VG I G+ F Sbjct: 87 ILAMQNLEKPIISAVHGFAAGAAFNLALASDFIIASEESRFVLSFSQVGLISDGGGLYFL 146 Query: 138 YPYVKP-------FLD---------KLGVSIKSVKSSPMKAEPSPF----SEVNPKAVQM 177 V P FL K G + V + +K E + F S+ KA Sbjct: 147 TKVVGPHRAKELLFLGEPMDADTAYKAGFLNRVVPLNQLKDEVTSFASRLSQGPTKAYGK 206 Query: 178 MQDVVDSSYHWFVRLVSESRNI 199 M+ +V+ S+H + V E + Sbjct: 207 MKKIVNDSFHLTLEQVLEQERL 228 >gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9515] gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9515] Length = 201 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + DD+ + + ++SPGGS AG AI+ I+ VK Sbjct: 29 VERILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPGGSVTAGLAIYDTIKYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCAS 118 + V+T +AAS G + A Sbjct: 89 S--DVVTICVGLAASMGAFLLGAG 110 >gi|256074339|ref|XP_002573483.1| peptidase Clp (S14 family) [Schistosoma mansoni] gi|238658663|emb|CAZ29715.1| peptidase Clp (S14 family) [Schistosoma mansoni] Length = 632 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 16/102 (15%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G + D + +I ++ + +D T + + ++SPGGS AG AI+ +Q + R P Sbjct: 71 ICLMGAVTDEMAGSVIAQLLFLQSEDKRTPIHLYINSPGGSVTAGLAIYDTMQFI--RPP 128 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 V T A+S G L+ A GS G F P+ Sbjct: 129 VATFCIGQASSMGSLLLAA------------GSHGCRFALPH 158 >gi|296111257|ref|YP_003621639.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii IMSNU 11154] gi|295832789|gb|ADG40670.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii IMSNU 11154] Length = 201 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 17/146 (11%) Query: 41 IAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I ++G++EDS ++ ++ + D + + ++SPGGS AG +I + +K P Sbjct: 28 ILVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIK--AP 85 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKS 157 V T V +AAS G +I+ + G G F P + + + +G ++ + Sbjct: 86 VTTIVMGLAASMGTIIASS------------GEKGHRFMLPNAEYLIHQPMGGAVGGTQQ 133 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVD 183 + M ++ K +++ D D Sbjct: 134 TDMAIIAEQLTKTRAKLNKILADASD 159 >gi|222475725|ref|YP_002564246.1| hypothetical protein Hlac_2791 [Halorubrum lacusprofundi ATCC 49239] gi|222454096|gb|ACM58360.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC 49239] Length = 776 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQSIRKIKDWNPPKNYW 259 ++SD + +G +A VG+ +V G +E W + + + D KI+ W+P +NYW Sbjct: 495 LVSDNTVISGVDADDVGVKEVRGVRE--WDTCFPYAIIDAEKEKIQRWSPIRNYW 547 >gi|33861870|ref|NP_893431.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|67460515|sp|Q7V0F1|CLPP2_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|33640238|emb|CAE19773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 201 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + DD+ + + ++SPGGS AG AI+ I+ VK Sbjct: 29 VERILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPGGSVTAGLAIYDTIKYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 S--DVVTICVGLAASMGAFLLGAGT 111 >gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp. PCC 6803] gi|2493737|sp|Q59993|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp. PCC 6803] Length = 226 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 59 QVADS--IVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVVTICFG 114 Query: 106 MAASAG-YLIS 115 +AAS G +L+S Sbjct: 115 LAASMGAFLLS 125 >gi|116617520|ref|YP_817891.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227432636|ref|ZP_03914612.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|116096367|gb|ABJ61518.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227351606|gb|EEJ41856.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 200 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 41 IAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I ++G+IEDS ++ ++ + D + + ++SPGGS AG +I + +K P Sbjct: 28 ILVQGEIEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIK--AP 85 Query: 99 VITEVHEMAASAGYLISCAS 118 V T V +AAS G +I+ + Sbjct: 86 VTTIVMGLAASMGTIIAASG 105 >gi|288920827|ref|ZP_06415125.1| Endopeptidase Clp [Frankia sp. EUN1f] gi|288347786|gb|EFC82065.1| Endopeptidase Clp [Frankia sp. EUN1f] Length = 255 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 31/169 (18%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 ++ +D + + ++SPGGS AG AI+ +Q V+N V T +AAS G + CA Sbjct: 103 LNAEDPQRDIFLYINSPGGSVSAGMAIYDTMQYVEND--VATVSLGLAASMGQFLLCA-- 158 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMM 178 G+ G + P+ + + + I S ++AE +++ +MM Sbjct: 159 ----------GAPGKRYSLPHARIMMHQPSGGIGGTASDIAIQAEQMLYTK------RMM 202 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q+ + ++H + R+ D R +T EAK G +D V Sbjct: 203 QERI--AFHTGQPVEQIERDSDRD--------RWFTADEAKDYGFVDHV 241 >gi|110669105|ref|YP_658916.1| hypothetical protein HQ3223A [Haloquadratum walsbyi DSM 16790] gi|109626852|emb|CAJ53321.1| hypothetical protein HQ3223A [Haloquadratum walsbyi DSM 16790] Length = 742 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQSIRKIKDWNPPKNYW 259 ++SD + +G +A VG+ +V G +E W + + + D KI+ W+P +NYW Sbjct: 461 LVSDNTVISGVDADDVGVKEVRGVRE--WDTCFPYAIIDAEKEKIQRWSPIRNYW 513 >gi|295091960|emb|CBK78067.1| Protease subunit of ATP-dependent Clp proteases [Clostridium cf. saccharolyticum K10] Length = 262 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 55/205 (26%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I DD +++ +++ GG G A+ I + +P ++ V + S Sbjct: 91 EHILPKLAEIEDDDQVDGMLILINTVGGDVSCGLALAEMIASLS--RPTVSLVIGDSHSI 148 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ AS+ Y ++ P + M P + + Sbjct: 149 GVPLAVASD------------------YSFIVP-------------TGTMMIHPVRMTGM 177 Query: 171 NPKAVQ------MMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSD-------GRIWTG 215 AVQ M+QD + VSE I YD K L+L+ G + G Sbjct: 178 VIGAVQTYDYFEMIQD-------RILSFVSEHARIAYDQLKGLMLNTKMLTKDLGTVLVG 230 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL 240 EA K GLID VGG E L L Sbjct: 231 EEAVKEGLIDEVGGIHEALTKLNEL 255 >gi|212546731|ref|XP_002153519.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Penicillium marneffei ATCC 18224] gi|210065039|gb|EEA19134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Penicillium marneffei ATCC 18224] Length = 257 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++++ S ++ ++ + D+ A+ + ++SPGGS AG AI+ + +++ P Sbjct: 79 ICLNGEVDETTSAAIVAQLLFLEADNPEKAIHLYINSPGGSVTAGLAIYDTMTYIQS--P 136 Query: 99 VITEVHEMAASAGYLISCASN 119 V T AAS G L+ C + Sbjct: 137 VHTICVGQAASMGSLLLCGGH 157 >gi|146420321|ref|XP_001486117.1| hypothetical protein PGUG_01788 [Meyerozyma guilliermondii ATCC 6260] Length = 328 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEV--HEMAASAGYLISCASNIIVAAETSLVG 130 + S G S Y+ + + + KVK+ PV+ ++ H + CA + I+ S VG Sbjct: 169 VRSVGVSNYSITKLKQLLPKVKHFVPVVNQIEYHPQLPQQDLVDFCAEHKILIEAYSPVG 228 Query: 131 SIGV-LFQYPYVKPFLDKLGVSIKSV 155 G + + PYVK DK GV++ + Sbjct: 229 GTGAPVLKIPYVKELADKYGVTVNEI 254 >gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lyngbya majuscula 3L] gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lyngbya majuscula 3L] Length = 198 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++I + + +D++ +I+ ++SPGGS AG AI+ +Q +K+ V+T +A Sbjct: 42 EITNQIIAVMLYLDSEDNSKDIILYINSPGGSVTAGMAIYDTMQHIKS--DVVTVCVGLA 99 Query: 108 ASAGYLISCAS 118 AS G + A Sbjct: 100 ASMGSFLLAAG 110 >gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana CCMP1335] gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana CCMP1335] Length = 201 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%) Query: 34 NSPHVARIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 N + RI G +I+D + ++I + + +DS + + ++SPGGS +G AIF A+ Sbjct: 25 NRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDSTKPIYLYINSPGGSVISGLAIFDAM 84 Query: 91 QKVKNRKPVITEVHEMAAS-AGYLISCAS 118 Q +K+ VIT +AAS A +++S S Sbjct: 85 QLIKSE--VITINLGLAASMASFILSAGS 111 >gi|167619474|ref|ZP_02388105.1| peptidase S14, ClpP [Burkholderia thailandensis Bt4] Length = 366 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 35/180 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + +++ ++ D A+++ V+++S GG + AI+ A+++ + V V +AA Sbjct: 36 DAQNFVSQLDAVAAD--ASSITVAINSMGGDVFDAFAIYNALRRYAGK--VKGRVDGIAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA L+ A + I E +L ++ +P+ ++ + +S Sbjct: 92 SAASLVLMACDEIEMPENAL-----LMIHHPH----------TVAAGES----------- 125 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 K ++ + +++D++ + ++ + D + D W T A+AK+ G DV+ Sbjct: 126 ----KDLRRVAELLDNASAGILAAYAQRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|88809170|ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] Length = 200 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D+ L+ ++ + +DS + + ++SPGGS AG AI+ IQ VK Sbjct: 29 VERILFLGSEVNDAVANSLVAQMLYLDSEDSGKPIYLYINSPGGSVTAGLAIYDTIQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 S--DVVTICVGLAASMGAFLLAAGT 111 >gi|72162593|ref|YP_290250.1| ClpP1 peptidase [Thermobifida fusca YX] gi|124013822|sp|Q47MU2|CLPP2_THEFY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|71916325|gb|AAZ56227.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Thermobifida fusca YX] Length = 203 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI GQ D + ++ + +S +D + + ++SPGGS AG AI+ +Q + N Sbjct: 30 RIVFLGQQVDDEIANRIVGELLLLSAEDRERDITLYINSPGGSVTAGMAIYDVMQYIPN- 88 Query: 97 KPVITEVHEMAASAGYLISCASN 119 V T +AAS G ++ CA Sbjct: 89 -DVRTVGIGLAASMGQMLLCAGT 110 >gi|167814835|ref|ZP_02446515.1| peptidase S14, ClpP [Burkholderia pseudomallei 91] gi|167911620|ref|ZP_02498711.1| peptidase S14, ClpP [Burkholderia pseudomallei 112] Length = 366 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 35/180 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + +++ ++ D A+++ V+++S GG + AI+ A+++ + V V +AA Sbjct: 36 DAQNFVSQLDAVAAD--ASSITVAINSMGGDVFDAFAIYNALRRYAGK--VKGRVDGIAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA L+ A + I E +L ++ +P+ + Sbjct: 92 SAASLVLMACDEIEMPENAL-----LMIHHPHT-------------------------VA 121 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 K ++ + +++D++ + ++ + D + D W T A+AK+ G DV+ Sbjct: 122 AGESKDLRRVAELLDNASAGILAAYAQRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|110803390|ref|YP_698964.1| Clp protease [Clostridium perfringens SM101] gi|168207521|ref|ZP_02633526.1| clp protease [Clostridium perfringens E str. JGS1987] gi|169342742|ref|ZP_02863782.1| clp protease [Clostridium perfringens C str. JGS1495] gi|110683891|gb|ABG87261.1| putative endopeptidase [Clostridium perfringens SM101] gi|169299248|gb|EDS81318.1| clp protease [Clostridium perfringens C str. JGS1495] gi|170661146|gb|EDT13829.1| clp protease [Clostridium perfringens E str. JGS1987] Length = 229 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 39/197 (19%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I ++D ++ L++ GG AG AI I+ +K KP ++ V S Sbjct: 57 EHMIPQLIDIEQNDRIKGILFVLNTVGGDVEAGLAIAEMIRSLK--KPTVSLVIGGGHSI 114 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK-AEPSPFSE 169 G ++ AS +Y ++ P + I ++ + + P F+ Sbjct: 115 GVPLATAS------------------KYSFISPSATMI---IHPIRMNGLVIGVPQTFNY 153 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD------GRIWTGAEAKKVGL 223 N MQ+ ++ F+ SE + K ++ +D G I G EA K GL Sbjct: 154 FNK-----MQERIND----FIIRTSEIKLDVLKKMMMQTDELLNDMGTILVGEEAVKCGL 204 Query: 224 IDVVGGQEEVWQSLYAL 240 I+ VGG +E L +L Sbjct: 205 INEVGGVKEALDKLNSL 221 >gi|160892565|ref|ZP_02073355.1| hypothetical protein CLOL250_00094 [Clostridium sp. L2-50] gi|156865606|gb|EDO59037.1| hypothetical protein CLOL250_00094 [Clostridium sp. L2-50] Length = 219 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 29/183 (15%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + D+S ++V L++ GG AG AI + + KPV+T V + S G ++ Sbjct: 62 VQDDESIKGVLVLLNTVGGDVEAGLAIAEMLASIS--KPVVTLVLGGSHSIGVPLA---- 115 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 V+ + S + + +P ++ ++ V+ N + ++ MQ Sbjct: 116 --VSGDVSFIVPTATMVVHPL------RVSDTVLGVRQ-------------NYEYIERMQ 154 Query: 180 DVVDSSYHWFVRLVSES-RNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D + ++ +S R+I ++ + D G + G EA K G+ID +GG + L Sbjct: 155 DRIIQFTSCHSKIDEDSLRSIMFNTQELSKDIGSVLVGKEAVKCGIIDRIGGVSDALNIL 214 Query: 238 YAL 240 Y L Sbjct: 215 YDL 217 >gi|289645297|ref|ZP_06477293.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata] gi|289504893|gb|EFD25995.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata] Length = 201 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Query: 47 IEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 +ED+ E+ ++ +S +D + + ++SPGGS AG AI+ +Q V N V+T Sbjct: 34 VEDAVANEICAKLLLLSAEDRERDIQLYINSPGGSVSAGMAIYDTMQYVTN--DVVTVAL 91 Query: 105 EMAASAGYLISCAS 118 A S G + CA Sbjct: 92 GFAGSMGQFLLCAG 105 >gi|238756367|ref|ZP_04617679.1| Protein C serine peptidase MEROPS family S49 [Yersinia ruckeri ATCC 29473] gi|238705428|gb|EEP97833.1| Protein C serine peptidase MEROPS family S49 [Yersinia ruckeri ATCC 29473] Length = 280 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + + + + SPGG + I + +KP+ + E A SA Y ++ A++ IV Sbjct: 100 DKTVKGICLDIDSPGGEVAGCFDLVDEIYASRGQKPIWAILSENAYSAAYALASAADRIV 159 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T VGS+GV+ + + G+ + + KAE +P++ ++ +A Q +Q V Sbjct: 160 VPRTGGVGSVGVIVMHVDWSQRIKADGLQVTIITYGDRKAESNPYTPLSEEAQQSIQSDV 219 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D FV V+ +R I +K + + A+ ++GL D V + +++L Sbjct: 220 DEMGRLFVSTVARNRGIA-EKIIRDTQAACLLAADGVQLGLADEVAAPDTAFRAL 273 >gi|159041798|ref|YP_001541050.1| hypothetical protein Cmaq_1233 [Caldivirga maquilingensis IC-167] gi|157920633|gb|ABW02060.1| protein of unknown function DUF114 [Caldivirga maquilingensis IC-167] Length = 292 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ +I I + +++ L +PGG A I RA++ +K V+ V Sbjct: 75 IEDSEAVIRAIRTTP---PSMPIMLILHTPGGLVLAASQIARALKSHPAKKIVV--VPHY 129 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV + +++G + Sbjct: 130 AMSGGTLIALAADEIVMDQNAVLGPL 155 >gi|190345753|gb|EDK37690.2| hypothetical protein PGUG_01788 [Meyerozyma guilliermondii ATCC 6260] Length = 328 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEV--HEMAASAGYLISCASNIIVAAETSLVG 130 + S G S Y+ + + + KVK+ PV+ ++ H + CA + I+ S VG Sbjct: 169 VRSVGVSNYSITKLKQLLPKVKHFVPVVNQIEYHPQLPQQDLVDFCAEHKILIEAYSPVG 228 Query: 131 SIGV-LFQYPYVKPFLDKLGVSIKSV 155 G + + PYVK DK GV++ + Sbjct: 229 GTGAPVLKIPYVKELADKYGVTVNEI 254 >gi|167744552|ref|ZP_02417326.1| peptidase S14, ClpP [Burkholderia pseudomallei 14] Length = 366 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 35/180 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + +++ ++ D A+++ V+++S GG + AI+ A+++ + V V +AA Sbjct: 36 DAQNFVSQLDAVAAD--ASSITVAINSMGGDVFDAFAIYNALRRYAGK--VKGRVDGIAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA L+ A + I E +L ++ +P+ ++ + +S Sbjct: 92 SAASLVLMACDEIEMPENAL-----LMIHHPH----------TVAAGES----------- 125 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 K ++ + +++D++ + ++ + D + D W T A+AK+ G DV+ Sbjct: 126 ----KDLRRVAELLDNASAGILAAYAQRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|28493448|ref|NP_787609.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei str. Twist] gi|28572439|ref|NP_789219.1| ATP-dependent Clp protease proteolytic subunit 1 [Tropheryma whipplei TW08/27] gi|67460537|sp|Q83G48|CLPP2_TROWT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|67460540|sp|Q83I19|CLPP1_TROW8 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|28410570|emb|CAD66957.1| ATP-dependent Clp protease proteolytic subunit 1 [Tropheryma whipplei TW08/27] gi|28476489|gb|AAO44578.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei str. Twist] Length = 180 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + E+ +I ++ DD + + ++SPGGS AG AI+ +Q V N ++T MAAS Sbjct: 29 ANEICAKILLLNADDPKEDIFLYINSPGGSITAGMAIYDTMQFVSN--DIVTVGIGMAAS 86 Query: 110 AGYLI 114 G ++ Sbjct: 87 MGQVL 91 >gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] Length = 194 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + DD + + ++SPGGS AG AI+ IQ +K+ VIT +AAS G + A Sbjct: 54 LDSDDQTKPIYLYINSPGGSVTAGMAIYDTIQYIKSE--VITICVGLAASMGSFLLAAG 110 >gi|329850496|ref|ZP_08265341.1| hypothetical protein ABI_34030 [Asticcacaulis biprosthecum C19] gi|328840811|gb|EGF90382.1| hypothetical protein ABI_34030 [Asticcacaulis biprosthecum C19] Length = 433 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 EL R+ R D+A +LI + SP AYA A F A + RK + E + AA+ G Sbjct: 279 ELASAFARLGRLDTAISLIERIKSPFDLAYA-HASFAAELVPQGRKSLAGEFADNAAAVG 337 Query: 112 ---YLISCASNII-VAAETSLVGSIGVLFQYPYVKP 143 Y IS I+ + AE SL+ L++ YV P Sbjct: 338 LKDYPISGYYGIVRILAEASLLDQALRLYRRLYVDP 373 >gi|33240370|ref|NP_875312.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|67460522|sp|Q7VC22|CLPP1_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|33237897|gb|AAP99964.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 196 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +D + + ++SPGGS Y G IF IQ +K V T +AAS G + CA Sbjct: 52 EDPEKDIFLYINSPGGSVYDGFGIFDTIQHIK--PDVHTVCVGLAASMGAFLLCAG 105 >gi|213968226|ref|ZP_03396370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato T1] gi|301385994|ref|ZP_07234412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato Max13] gi|302058876|ref|ZP_07250417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato K40] gi|213926864|gb|EEB60415.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato T1] Length = 383 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + I+ ++ I DD + ++ + ++ GG + G AI A+ ++ R + +AAS Sbjct: 53 ANQFIQDLKAI--DDGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER--CTARIDALAAS 108 Query: 110 AGYLISCASNIIVAAETSLV 129 AG + +C ++ +V A +++ Sbjct: 109 AGSVAACGAHRMVMASNAML 128 >gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC 51142] gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp. ATCC 51142] Length = 229 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS YAG AI+ +Q++ R V+T Sbjct: 62 QVADS--IVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQI--RPDVVTICFG 117 Query: 106 MAASAG-YLISCAS 118 +AAS G +L+S + Sbjct: 118 LAASMGAFLLSGGA 131 >gi|291087633|ref|ZP_06346979.2| translocation-enhancing protein TepA [Clostridium sp. M62/1] gi|291074513|gb|EFE11877.1| translocation-enhancing protein TepA [Clostridium sp. M62/1] Length = 264 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I DD +++ +++ GG G A+ I + +P ++ V + S Sbjct: 93 EHILPKLAEIEDDDQVDGMLILINTVGGDVSCGLALAEMIASLS--RPTVSLVIGDSHSI 150 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ VA++ S + G + +P + G+ I +V++ Sbjct: 151 GVPLA------VASDYSFIVPTGTMMIHP-----VRMTGMVIGAVQTYDY---------- 189 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSD-------GRIWTGAEAKKV 221 +M+QD + + VSE I YD K L+L+ G + G EA K Sbjct: 190 ----FEMIQDRI-------LSFVSEHARIAYDQLKGLMLNTKMLTKDLGTVLVGEEAVKE 238 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG E L L Sbjct: 239 GLIDEVGGIHEALTKLNEL 257 >gi|28870573|ref|NP_793192.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato str. DC3000] gi|28853821|gb|AAO56887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato str. DC3000] Length = 381 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + I+ ++ I DD + ++ + ++ GG + G AI A+ ++ R + +AAS Sbjct: 53 ANQFIQDLKAI--DDGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER--CTARIDALAAS 108 Query: 110 AGYLISCASNIIVAAETSLV 129 AG + +C ++ +V A +++ Sbjct: 109 AGSVAACGAHRMVMASNAML 128 >gi|170086161|ref|XP_001874304.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651856|gb|EDR16096.1| predicted protein [Laccaria bicolor S238N-H82] Length = 243 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 41 IAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G I DS ++ ++ + +DS + + ++SPGGS AG AI+ +Q V + P Sbjct: 71 IMLHGTIRDSDSTLIVAQLLFLEAEDSTKPIHLYINSPGGSVTAGLAIYDTMQYVSS--P 128 Query: 99 VITEVHEMAASAGYLISCA 117 + T +AAS G L+ A Sbjct: 129 IHTYSLGLAASMGSLLLAA 147 >gi|117927945|ref|YP_872496.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Acidothermus cellulolyticus 11B] gi|117648408|gb|ABK52510.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidothermus cellulolyticus 11B] Length = 221 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 34/192 (17%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G + D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q V+ Sbjct: 45 RILFLGTVVDDALANKICAQLLLLAAEDPDRDIYLYINSPGGSVDAGMAIYDTMQYVQCD 104 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS G + CA G+ G + P+ + + + Sbjct: 105 --VATVALGLAASMGQFLLCA------------GAKGKRYALPHARIMMHQ--------- 141 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 P+ S + +A QM+ + +L+S+ P ++ SD W A Sbjct: 142 --PLGGIGGTASLIAIQAEQMLY-----AKRTLQQLISQHTGQPIERIERDSDRERWFSA 194 Query: 217 -EAKKVGLIDVV 227 EAK+ G ID V Sbjct: 195 EEAKEYGFIDHV 206 >gi|311113766|ref|YP_003984988.1| ATP-dependent Clp protease proteolytic subunit [Rothia dentocariosa ATCC 17931] gi|310945260|gb|ADP41554.1| ATP-dependent Clp protease proteolytic subunit [Rothia dentocariosa ATCC 17931] Length = 195 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +S +D + + ++SPGGS AG AI+ +Q + N V+T V MAAS G + A Sbjct: 44 LSAEDPEADIYLYINSPGGSVTAGMAIYDTMQLIPN--DVVTVVTGMAASMGQFLLTAG 100 >gi|284929271|ref|YP_003421793.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium UCYN-A] gi|284809715|gb|ADB95412.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium UCYN-A] Length = 198 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +DS+ + + ++SPGGS AG AIF +Q + R VIT +AAS G + A Sbjct: 57 EDSSKPIYLYINSPGGSVTAGMAIFDTMQYI--RSEVITICVGLAASMGSFLLAAGT 111 >gi|134277934|ref|ZP_01764649.1| Clp protease domain protein [Burkholderia pseudomallei 305] gi|134251584|gb|EBA51663.1| Clp protease domain protein [Burkholderia pseudomallei 305] Length = 359 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 35/180 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + +++ ++ D A+++ V+++S GG + AI+ A+++ + V V +AA Sbjct: 36 DAQNFVSQLDAVAAD--ASSITVAINSMGGDVFDAFAIYNALRRYAGK--VKGRVDGIAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA L+ A + I E +L ++ +P+ + Sbjct: 92 SAASLVLMACDEIEMPENAL-----LMIHHPHT-------------------------VA 121 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 K ++ + +++D++ + ++ + D + D W T A+AK+ G DV+ Sbjct: 122 AGESKDLRRVAELLDNASAGILAAYAQRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|118431752|ref|NP_148417.2| serine protease [Aeropyrum pernix K1] gi|116063074|dbj|BAA81162.2| serine protease [Aeropyrum pernix K1] Length = 503 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%) Query: 35 SPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 P I I G I+++ L + IER +++ LIV L++PGG A + +I K Sbjct: 86 GPKALIIRIEGTIDNAMMDYLKQSIERAEEENAV--LIVELNTPGGFVDAATEMVVSISK 143 Query: 93 VKNRKPVITEVHEM-AASAGYLISCASNIIVAAETSLVGSI 132 R PV+ V E A SAG +I +++I +++GS+ Sbjct: 144 A--RIPVVGYVVEKWAESAGTMILMSTHIAAMQPGTIIGSV 182 >gi|331017560|gb|EGH97616.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 335 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + I+ ++ I DD + ++ + ++ GG + G AI A+ ++ R + +AAS Sbjct: 53 ANQFIQDLKAI--DDGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER--CTARIDALAAS 108 Query: 110 AGYLISCASNIIVAAETSLV 129 AG + +C ++ +V A +++ Sbjct: 109 AGSVAACGAHRMVMASNAML 128 >gi|167769170|ref|ZP_02441223.1| hypothetical protein ANACOL_00493 [Anaerotruncus colihominis DSM 17241] gi|167668810|gb|EDS12940.1| hypothetical protein ANACOL_00493 [Anaerotruncus colihominis DSM 17241] Length = 240 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 77/195 (39%), Gaps = 35/195 (17%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + +D L+V L++ GG AG AI + + RKP ++ V S Sbjct: 70 EHVIPQLLAVEQDPEIEGLVVILNTVGGDVEAGLAIAELLSGM--RKPTVSLVLGGGHSI 127 Query: 111 G--YLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G +S + IV + T V + G++ P + D++ I + + P Sbjct: 128 GVPLAVSARRSFIVPSATMTVHPVRMNGLVLGVPQTLSYFDRMQERIVKFVTDNSRISPE 187 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F + + M +D LV+ G + G A GLID Sbjct: 188 RF-----RQLMMNKD-----------------------ELVMDVGTVLDGQAAVDEGLID 219 Query: 226 VVGGQEEVWQSLYAL 240 +GG +V +LY + Sbjct: 220 SLGGVSDVIAALYEM 234 >gi|187735829|ref|YP_001877941.1| peptidase S49 [Akkermansia muciniphila ATCC BAA-835] gi|187425881|gb|ACD05160.1| peptidase S49 [Akkermansia muciniphila ATCC BAA-835] Length = 247 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 30/164 (18%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVG 130 SPGG I+ + PV + V M SA Y ++ A + +V ET+LVG Sbjct: 95 FDSPGGDVQGCHETAELIKSL----PVETVAYVKGMCCSAAYYLASACDQVVVTETALVG 150 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPM-------KAEPSPFSEVNPKAVQMMQDVVD 183 SIG + +S+ + KS + P + +N +A+ +D+ + Sbjct: 151 SIGTV--------------ISLWNAKSEEILTITNDDAVFKHPETPMNTEAIAYYRDLCN 196 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F V+ R P S G+++ +A +GLID V Sbjct: 197 KIAGRFQEFVASGR--PGLSADAFS-GKVFVAEDAVSLGLIDDV 237 >gi|87312030|ref|ZP_01094138.1| hypothetical protein DSM3645_13173 [Blastopirellula marina DSM 3645] gi|87285269|gb|EAQ77195.1| hypothetical protein DSM3645_13173 [Blastopirellula marina DSM 3645] Length = 700 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 7/116 (6%) Query: 40 RIAIRGQIEDSQ-ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 ++ + G + ++Q + + R+ + D +++ + SPGG A E++ + K Sbjct: 255 QVKLSGGVTNNQVQQLMRLIQSEVSDKVNLVLIEIDSPGGDPVAVESLMNYLMKQPAEVR 314 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-----VKPFLDKLG 149 + + + AA +++ A + IV A SLVG G +QY V+ FL ++G Sbjct: 315 TVALIKQQAAGNAAIVAFACDEIVVATDSLVGGAGA-YQYSEQGTTDVRNFLIQVG 369 >gi|300741667|ref|ZP_07071688.1| Clp protease [Rothia dentocariosa M567] gi|300380852|gb|EFJ77414.1| Clp protease [Rothia dentocariosa M567] Length = 212 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +S +D + + ++SPGGS AG AI+ +Q + N V+T MAAS G L+ A Sbjct: 61 LSAEDPKADIYLYINSPGGSVTAGLAIYDTMQLIPND--VVTVATGMAASMGQLLLTAG 117 >gi|317970010|ref|ZP_07971400.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CB0205] Length = 196 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++ ++ + +D + + ++SPGGS Y G IF +Q +K V T +A Sbjct: 37 ESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIFDTMQHIK--PDVQTVCVGLA 94 Query: 108 ASAGYLISCAS 118 AS G + CA Sbjct: 95 ASMGAFLLCAG 105 >gi|145593253|ref|YP_001157550.1| endopeptidase Clp [Salinispora tropica CNB-440] gi|145302590|gb|ABP53172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salinispora tropica CNB-440] Length = 194 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + + +I ++ +D + + ++SPGGS AG A++ +Q V+N V T MA Sbjct: 35 ESANRVCAQILLLAAEDPDRDIKLYINSPGGSVSAGMAVYDTMQFVRN--DVATLALGMA 92 Query: 108 ASAGYLISCASN 119 S G + CA Sbjct: 93 GSMGQFLLCAGT 104 >gi|320103932|ref|YP_004179523.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera pallida ATCC 43644] gi|319751214|gb|ADV62974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera pallida ATCC 43644] Length = 252 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 33/190 (17%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G I++ + LI++ + ++ + ++SPGGS Y+ A++ +Q V P Sbjct: 50 IFLEGPIDNVIANHLIKQFLYLQFENRTQGISFYINSPGGSVYSTLAVYDTMQFVNC--P 107 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 + T MAAS + +++A G+ G F P+ S Sbjct: 108 IATYCIGMAAS-------GAAVLLAG-----GTKGKRFSLPH----------------SK 139 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE 217 M +PS + +++ D + + ++++ PY++ ++ R T AE Sbjct: 140 IMIHQPSGYVGGQVSDIEIQADEILKNKKLINEILAKHTGQPYERIAKDTERDRYLTAAE 199 Query: 218 AKKVGLIDVV 227 AK+ GL+D V Sbjct: 200 AKEYGLVDEV 209 >gi|83645181|ref|YP_433616.1| ATP-dependent Clp protease proteolytic subunit ClpP [Hahella chejuensis KCTC 2396] gi|83633224|gb|ABC29191.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hahella chejuensis KCTC 2396] Length = 194 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 8/63 (12%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +DS + V +SSPGG +G+AI I+ + R PVIT AG++ S ++I + Sbjct: 51 EDSEDPIRVLISSPGGHVESGDAIHDIIRFI--RAPVIT------VGAGWVASAGTHIYL 102 Query: 123 AAE 125 AAE Sbjct: 103 AAE 105 >gi|114566793|ref|YP_753947.1| peptidase S14, ClpP [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337728|gb|ABI68576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 267 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 53/204 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + + L+V+L++ GG AG A+ I + KP ++ V S Sbjct: 94 EHIIPQLVAVEENPQIKGLLVALNTVGGDVEAGLALAEMIASLS--KPTVSIVLGGGHSI 151 Query: 111 GYLISCASN--IIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G I+ +N I + T + I G++ P +LDK Sbjct: 152 GSTIAVCTNYSFIAPSATMTIHPIRLTGLVIGVPQTYEYLDK------------------ 193 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---------TLVLSDGRIWTGA 216 MQD V VR V E NI +K L G + G Sbjct: 194 ------------MQDRV-------VRFVVEHSNISEEKFRELMFRMGDLARDIGTVLVGK 234 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 +A GLID VGG ++ ++ L Sbjct: 235 DAVDCGLIDQVGGIKDALNKIHEL 258 >gi|50954514|ref|YP_061802.1| ATP-dependent Clp protease proteolytic subunit [Leifsonia xyli subsp. xyli str. CTCB07] gi|67460475|sp|Q6AFZ8|CLPP1_LEIXX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|50950996|gb|AAT88697.1| ATP-dependent Clp protease proteolytic subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 197 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ E+ ++ ++ +DS + + ++SPGGS AG AI+ +Q V N ++T MA Sbjct: 29 ENANEIAAKLLLLAAEDSKRDIYLYINSPGGSITAGMAIYDTMQFVPN--DIVTVGIGMA 86 Query: 108 ASAGYLISCAS 118 AS G L+ A Sbjct: 87 ASMGQLLLTAG 97 >gi|257865163|ref|ZP_05644816.1| peptidase S14 [Enterococcus casseliflavus EC30] gi|257871487|ref|ZP_05651140.1| peptidase S14 [Enterococcus casseliflavus EC10] gi|257874785|ref|ZP_05654438.1| peptidase S14 [Enterococcus casseliflavus EC20] gi|325571575|ref|ZP_08147075.1| ATP-dependent Clp protease, protease subunit [Enterococcus casseliflavus ATCC 12755] gi|257799097|gb|EEV28149.1| peptidase S14 [Enterococcus casseliflavus EC30] gi|257805651|gb|EEV34473.1| peptidase S14 [Enterococcus casseliflavus EC10] gi|257808951|gb|EEV37771.1| peptidase S14 [Enterococcus casseliflavus EC20] gi|325156051|gb|EGC68247.1| ATP-dependent Clp protease, protease subunit [Enterococcus casseliflavus ATCC 12755] Length = 196 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 33/190 (17%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AIF + +K Sbjct: 30 IMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGLAIFDTMNFIK--AD 87 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V T V MAAS G + A G G F P + + + Sbjct: 88 VQTIVMGMAASMGSFLLTA------------GEKGKRFALPNAEIMIHQ----------- 124 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE 217 P+ +E+ A ++ ++ +++SE P + +D T E Sbjct: 125 PLGGAQGQATEIEIAARHIL-----ATRERLNKILSERTGQPIEVIERDTDRDNFMTAQE 179 Query: 218 AKKVGLIDVV 227 AK GLID + Sbjct: 180 AKDYGLIDEI 189 >gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus caprae C87] gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus caprae C87] Length = 195 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 34/192 (17%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIK-- 85 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS G + A G+ G F P + + + Sbjct: 86 PDVQTICIGMAASMGSFLLAA------------GAKGKRFALPNAEVMIHQ--------- 124 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P+ +E+ A +++ + R+++E +K +D T Sbjct: 125 --PLGGAQGQATEIEIAANHILK-----TREKLNRILAERTGQSIEKIQQDTDRDNFLTA 177 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 EEAKEYGLIDEV 189 >gi|269839326|ref|YP_003324018.1| hypothetical protein Tter_2297 [Thermobaculum terrenum ATCC BAA-798] gi|269791056|gb|ACZ43196.1| protein of unknown function DUF114 [Thermobaculum terrenum ATCC BAA-798] Length = 286 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 24/166 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ + D + + + L +PGG A E I RA++ + V V Sbjct: 65 IEDSEAVLRAVHLT---DPSVPIDMILHTPGGLVIAAEQIARALKAHPAK--VTVFVPHY 119 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV +++G + L +YP SI V E Sbjct: 120 AMSGGTLIALAADEIVMGPHAVLGPVDPQLGEYP---------AASILKV------VEQK 164 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD 209 P +EV+ + + ++ DV + + V E +P D+ L+D Sbjct: 165 PLAEVDDQTI-ILADVARKAMGQVRQTVLELLGDKMPQDRAQALAD 209 >gi|315224014|ref|ZP_07865855.1| ATP-dependent Clp protease proteolytic subunit [Capnocytophaga ochracea F0287] gi|314945985|gb|EFS97993.1| ATP-dependent Clp protease proteolytic subunit [Capnocytophaga ochracea F0287] Length = 219 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 DSA + + ++SPGGS YAG I+ +Q +K V T +AAS ++ CA Sbjct: 81 DSAKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGIAASMAAVLLCA 132 >gi|260060592|ref|YP_003193672.1| ATP-dependent Clp protease, proteolytic subunit [Robiginitalea biformata HTCC2501] gi|88784722|gb|EAR15891.1| ATP-dependent Clp protease, proteolytic subunit [Robiginitalea biformata HTCC2501] Length = 195 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 DS+ + + ++SPGGS YAG I+ +Q +K V T MAAS ++ CA Sbjct: 55 DSSKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGMAASMAAVLLCAG 107 >gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus capitis SK14] gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus capitis SK14] Length = 195 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 34/192 (17%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIK-- 85 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS G + A G+ G F P + + + Sbjct: 86 PDVQTICIGMAASMGSFLLAA------------GAKGKRFALPNAEVMIHQ--------- 124 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P+ +E+ A +++ + R+++E +K +D T Sbjct: 125 --PLGGAQGQATEIEIAANHILK-----TREKLNRILAERTGQSIEKIQQDTDRDNFLTA 177 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 EEAKEYGLIDEV 189 >gi|218262799|ref|ZP_03477157.1| hypothetical protein PRABACTJOHN_02837 [Parabacteroides johnsonii DSM 18315] gi|218223131|gb|EEC95781.1| hypothetical protein PRABACTJOHN_02837 [Parabacteroides johnsonii DSM 18315] Length = 460 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDD-SATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 P V +I I+ +I ++ L R + A A+++ +++ GG A +++ AI + Sbjct: 28 PLVYKIDIKKEISNTTRLYLRGGLAEANALGADAVLIHMNTYGGQVDAADSMRTAI--LY 85 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 N PV + AASAG LIS A I + + +G+ V+ Q P DK ++S Sbjct: 86 NSIPVYVFIDNNAASAGALISIACKKIYMRKGANIGAATVVNQTGAAMP--DKYQSYMRS 143 Query: 155 VKSSPMKAE 163 + S +A Sbjct: 144 MMRSTAEAH 152 >gi|239626582|ref|ZP_04669613.1| peptidase S14 ClpP [Clostridiales bacterium 1_7_47_FAA] gi|239516728|gb|EEQ56594.1| peptidase S14 ClpP [Clostridiales bacterium 1_7_47FAA] Length = 252 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 39/224 (17%) Query: 31 VEDNSPH--VARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSP 76 +EDN + I I G++E + ++ ++ I DDS L+V L++ Sbjct: 46 LEDNQKQRKIHLITIIGEVEGHENSSGSSKTTKYDHILPKLAEIEDDDSVDGLLVLLNTS 105 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GG AG AI I + P ++ V + S G ++ ++N S + G + Sbjct: 106 GGDVDAGLAIAEMIASLS--LPTVSLVLGGSHSIGVPLAVSTNY------SFIVPSGTMM 157 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +P + G+ I + ++ F + + + + D +Y L+ + Sbjct: 158 IHP-----VRMTGMVIGTAQTYEY------FEMIQDRILTFVASHADIAYDQLRDLMHNT 206 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + D G + G +A + GLI+ VGG +E LY + Sbjct: 207 KMLTRDL------GTVLVGEQAVEAGLINQVGGIKEALGKLYEM 244 >gi|253699355|ref|YP_003020544.1| ribonuclease, Rne/Rng family [Geobacter sp. M21] gi|251774205|gb|ACT16786.1| ribonuclease, Rne/Rng family [Geobacter sp. M21] Length = 919 Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 10/95 (10%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG------- 77 + W + ++ H R I+ + QELI ++E+ RD+ +AL +S PG Sbjct: 75 WKWRDDIPEDQRH-RRPRIQEVLRRGQELIVQVEKGERDNKGSALTTYVSLPGRYMVLMP 133 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 GS AG I R ++ RK + + EM GY Sbjct: 134 GSDSAG--ISRKVEGDGERKKLKEIIAEMTIPEGY 166 >gi|156084894|ref|XP_001609930.1| ATP-dependent Clp protease proteolytic subunit 1 [Babesia bovis T2Bo] gi|154797182|gb|EDO06362.1| ATP-dependent Clp protease proteolytic subunit 1, putative [Babesia bovis] Length = 225 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E S LI +I R++ ++ + ++SPGGS AG AI+ +Q +K R I + + A Sbjct: 58 EKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSLKMRVETIC-IGQAA 116 Query: 108 ASAGYLISCASNIIVAA 124 + +L++ + + +A Sbjct: 117 SMGAFLLAAGAKGLRSA 133 >gi|13095787|ref|NP_076678.1| protease [Lactococcus phage bIL286] gi|15673378|ref|NP_267552.1| ATP dependent Clp protease [Lactococcus lactis subsp. lactis Il1403] gi|30089895|ref|NP_839925.1| putative ClpP protease [Lactococcus phage P335 sensu lato] gi|12724383|gb|AAK05494.1|AE006371_8 prophage pi3 protein 23, ATP dependent Clp protease [Lactococcus lactis subsp. lactis Il1403] gi|12830976|gb|AAK08331.1|AF323669_44 protease [Lactococcus phage bIL286] gi|21954684|gb|AAM83073.1|AF489521_34 putative ClpP protease [Lactococcus phage 4268] Length = 235 Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 ++++++S GG +A I+ AI+ N KPV + +AASA +I+ A + + Sbjct: 45 IVLNIASNGGDVFAASEIYTAIKM--NGKPVTVNIQGLAASAASVIAMAGDTV 95 >gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria sp. PCC 6506] gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria sp. PCC 6506] Length = 229 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ DS ++ ++ + +D + + ++SPGGS AG AI+ +Q+V R V+T + Sbjct: 62 QVADS--IVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQV--RPDVVTICYG 117 Query: 106 MAASAGYLISCAS 118 +AAS G + A Sbjct: 118 LAASMGAFLMAAG 130 >gi|255647414|gb|ACU24172.1| unknown [Glycine max] Length = 238 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I I G I D + ++ ++ + ++S+ + + L+SPGG+ AG AI+ +Q + R P Sbjct: 56 ICINGPISDDTAHVVVAQLLFLESENSSKPINMYLNSPGGAVTAGLAIYDTMQYI--RSP 113 Query: 99 VITEVHEMAASAGYLISCAS 118 V T AAS G L+ A Sbjct: 114 VNTICMGQAASMGSLLLAAG 133 >gi|168211352|ref|ZP_02636977.1| serine protease [Clostridium perfringens B str. ATCC 3626] gi|170710641|gb|EDT22823.1| serine protease [Clostridium perfringens B str. ATCC 3626] Length = 255 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 19/143 (13%) Query: 27 WSSHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPG 77 W + N+P A I + +I +Q E +E + + L V ++SPG Sbjct: 6 WEIKAKANNPSEADIYLYIEIASWGGGYCAHSAQSFTEELESLG---DISTLNVYINSPG 62 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-------AGYLISCASNIIVAAETSLVG 130 G + G AIF +++ + + + MAAS AG IS SN ++ + +G Sbjct: 63 GDVFEGYAIFNVLRRKADNCQINVYIDGMAASIASVIAMAGTHISMPSNAVMMIHRASIG 122 Query: 131 SIGVLFQYPYVKPFLDKLGVSIK 153 G FL+K+ ++K Sbjct: 123 IYGNSDVLAKGIKFLEKIDNNMK 145 >gi|125624869|ref|YP_001033352.1| hypothetical protein llmg_2097 [Lactococcus lactis subsp. cremoris MG1363] gi|290891540|ref|ZP_06554597.1| hypothetical protein AWRIB429_1987 [Oenococcus oeni AWRIB429] gi|124493677|emb|CAL98664.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|290478793|gb|EFD87460.1| hypothetical protein AWRIB429_1987 [Oenococcus oeni AWRIB429] gi|300071664|gb|ADJ61064.1| ATP dependent Clp protease [Lactococcus lactis subsp. cremoris NZ9000] Length = 234 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 ++++++S GG +A I+ AI+ N KPV + +AASA +I+ A + + Sbjct: 44 IVLNIASNGGDVFAASEIYTAIKM--NGKPVTVNIQGLAASAASVIAMAGDTV 94 >gi|119953533|ref|YP_945742.1| ATP-dependent Clp protease proteolytic subunit [Borrelia turicatae 91E135] gi|119862304|gb|AAX18072.1| ATP-dependent Clp protease proteolytic subunit [Borrelia turicatae 91E135] Length = 196 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Query: 41 IAIRGQI-EDSQELI-ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I I G+I +D+ +L ERI + D + V + S GG AG AIF I+ VK + Sbjct: 25 IVITGEINKDTSKLFQERILFLEASDCNKPIFVYIDSEGGDIDAGFAIFNMIRFVKPK-- 82 Query: 99 VITEVHEMAASAGYLISCASN 119 V T + ASAG LI A++ Sbjct: 83 VFTIGVGLVASAGALIFLAAD 103 >gi|153932099|ref|YP_001384751.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397] gi|152928143|gb|ABS33643.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397] Length = 252 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 L + ++SPGGS + G+AI+ I++ K + + V +AAS +I+ A N I + S+ Sbjct: 55 LNIYINSPGGSVFQGQAIYNIIKRHKAK--INIHVDGVAASIASVIAMAGNTIFMPKNSM 112 Query: 129 V 129 + Sbjct: 113 M 113 >gi|326803696|ref|YP_004321514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Aerococcus urinae ACS-120-V-Col10a] gi|326651369|gb|AEA01552.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Aerococcus urinae ACS-120-V-Col10a] Length = 200 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 33/188 (17%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ D + +I ++ + D+ + + ++SPGGS AG AI+ +Q V Sbjct: 30 IMLSGEVNDDMANSVIAQLLFLDAQDNDKDIYIYINSPGGSVTAGMAIYDTMQFVN--AD 87 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+T V +AAS G ++ G+ G + P+ + + + Sbjct: 88 VVTIVTGLAASMGSILLIG------------GTKGKRYALPHSEVLIHQ----------- 124 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAE 217 P+ +E+ A ++Q + +++E DK D W T E Sbjct: 125 PLGGVQGQATEIEISARHILQ-----TKQTLKEIIAERSGQDIDKVEKDMDRDYWMTAKE 179 Query: 218 AKKVGLID 225 AK G+ID Sbjct: 180 AKDYGIID 187 >gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365] gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365] Length = 202 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +D+ +++ ++SPGGS AG AI+ +Q + R PV T AAS G L+ A + Sbjct: 61 EDAEKEIMLYINSPGGSVTAGMAIYDTMQHI--RCPVATVCVGQAASMGALLLAAGS 115 >gi|33862335|ref|NP_893895.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9313] gi|67460519|sp|Q7V992|CLPP1_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|33640448|emb|CAE20237.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9313] Length = 224 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ D+ L+ ++ + +D + + ++SPGGS AG AI+ +Q+V V+T + Sbjct: 61 QVADA--LVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVA--PDVVTICYG 116 Query: 106 MAASAGYLISCASN 119 +AAS G + C Sbjct: 117 LAASMGAFLLCGGT 130 >gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9313] gi|67460518|sp|Q7V8M4|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313] Length = 200 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 31/193 (16%) Query: 38 VARIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI GQ + D + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK Sbjct: 29 VERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+T +AAS G + A G+ G P+ + + + Sbjct: 89 S--DVVTICVGLAASMGAFLLTA------------GTKGKRLALPHSRIMIHQPLGGTNQ 134 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 ++S + E+ + + ++D+++ S E D+ LS Sbjct: 135 RQASDI--------EIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYFLS------ 180 Query: 215 GAEAKKVGLIDVV 227 AEAK GLID V Sbjct: 181 AAEAKDYGLIDRV 193 >gi|256820835|ref|YP_003142114.1| Endopeptidase Clp [Capnocytophaga ochracea DSM 7271] gi|256582418|gb|ACU93553.1| Endopeptidase Clp [Capnocytophaga ochracea DSM 7271] Length = 219 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 DSA + + ++SPGGS YAG I+ +Q +K V T +AAS ++ CA Sbjct: 81 DSAKDIQIYINSPGGSVYAGLGIYDTMQFIK--PDVATICTGIAASMAAVLLCAG 133 >gi|124021784|ref|YP_001016091.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9303] gi|123962070|gb|ABM76826.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9303] Length = 224 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 Q+ D+ L+ ++ + +D + + ++SPGGS AG AI+ +Q+V V+T + Sbjct: 61 QVADA--LVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVA--PDVVTICYG 116 Query: 106 MAASAGYLISCASN 119 +AAS G + C Sbjct: 117 LAASMGAFLLCGGT 130 >gi|331699529|ref|YP_004335768.1| peptidase S14 ClpP [Pseudonocardia dioxanivorans CB1190] gi|326954218|gb|AEA27915.1| peptidase S14 ClpP [Pseudonocardia dioxanivorans CB1190] Length = 433 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +++ L+SPGG A+ G AI ++ + R V+ V MAASA +I+ A + +V Sbjct: 78 IVLHLNSPGGDAFEGVAIANVLRAHRAR--VVVRVDGMAASAASVIAMAGDEVV 129 >gi|254432163|ref|ZP_05045866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp. PCC 7001] gi|197626616|gb|EDY39175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp. PCC 7001] Length = 196 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++ ++ + +D + + ++SPGGS Y G IF +Q +K V T +A Sbjct: 37 ESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIFDTMQHIK--PDVQTVCVGLA 94 Query: 108 ASAGYLISCASN 119 AS G + CA Sbjct: 95 ASMGAFLLCAGT 106 >gi|159903385|ref|YP_001550729.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9211] gi|159888561|gb|ABX08775.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9211] Length = 196 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +D + + ++SPGGS Y G IF I+ VK V T +AAS G + CA Sbjct: 52 EDPEKDIFLYINSPGGSVYDGLGIFDTIEHVK--PDVHTVCVGLAASMGAFLLCAG 105 >gi|282900572|ref|ZP_06308514.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] gi|281194372|gb|EFA69327.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] Length = 194 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + DD + + ++SPGGS AG AI+ IQ +K+ V+T +AAS G + A Sbjct: 54 LDSDDQTKPIYLYINSPGGSVTAGMAIYDTIQYIKSE--VVTICVGLAASMGSFLLAAG 110 >gi|226309396|ref|YP_002769356.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus erythropolis PR4] gi|226188513|dbj|BAH36617.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus erythropolis PR4] Length = 202 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ D+ + + + ++ D +++ ++SPGGS +AG AI+ ++ + N Sbjct: 25 ILLTGEVNDAMAERVCSELVLLATTDPKRDIVLYINSPGGSVFAGLAIYDTMKLIPN--D 82 Query: 99 VITEVHEMAASAGYLISCASN 119 V+T AAS G ++ C+ Sbjct: 83 VVTVAMGFAASMGQVLLCSGT 103 >gi|322421132|ref|YP_004200355.1| ribonuclease, Rne/Rng family [Geobacter sp. M18] gi|320127519|gb|ADW15079.1| ribonuclease, Rne/Rng family [Geobacter sp. M18] Length = 937 Score = 35.8 bits (81), Expect = 7.4, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 10/95 (10%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG------- 77 + W + ++ H R I+ + QELI ++E+ RD+ +AL S PG Sbjct: 79 WKWRDDIPEDQRH-RRPRIQEVLRRGQELIVQVEKGERDNKGSALTTYASLPGRYMVLMP 137 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 GS AG I R ++ RK + + EM GY Sbjct: 138 GSDSAG--ISRKVESEGERKKLKEIIAEMTIPEGY 170 >gi|213584071|ref|ZP_03365897.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 310 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 11/180 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I + D + T +++ L + G + I +A+++ ++ + V E + Sbjct: 99 DIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGKPVFAVGENYSQG 158 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ +N I + V G Y K LDKL VS + K+ PF Sbjct: 159 QYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRVGTYKSAVEPFIRD 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 +++P A + + + ++ VS +R I S +++ GA+A GL V G Sbjct: 219 DMSPAAREADSRWIGELWQNYLHTVSANRQI--------SPQQLFPGAQAIIDGLTSVGG 270 >gi|163867606|ref|YP_001608805.1| putative capsid protein of prophage [Bartonella tribocorum CIP 105476] gi|161017252|emb|CAK00810.1| putative capsid protein of prophage [Bartonella tribocorum CIP 105476] Length = 348 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 19/225 (8%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-----RKPVITEVHEMAASAGY 112 E I++ D A+++ + S GG A IF +++ + KP+ +E A SA Y Sbjct: 96 EAIAQPD-VNAVLLDIDSGGGEA---GGIFDLVEEFQTLSKQYAKPIWAHANEFACSAAY 151 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+CA++ I T +VGSIGV+ + +K G+ V K +P ++ Sbjct: 152 AIACAASQIWITRTGVVGSIGVVCAHLDQSRADEKQGLKWTFVFEGDHKTHGNPHEPLSD 211 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 A MQ Y FV V+++R + D + + + G +A ++GL D G Sbjct: 212 TAQIKMQADCTLLYEMFVDWVAKNRPLSAD-AIRDTKAETFIGTQALELGLADAQG---T 267 Query: 233 VWQSLYAL--GVDQSIRKIKD----WNPPKNYWFCDLKNLSISSL 271 + Q+L AL + Q+ K W+ P +K LS SS+ Sbjct: 268 LAQALEALTDSISQTPTATKKGQNTWHAPYTAPKKMMKKLSTSSM 312 >gi|148239550|ref|YP_001224937.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7803] gi|147848089|emb|CAK23640.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp. WH 7803] Length = 196 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++ ++ + +D + + ++SPGGS Y G IF +Q +K V T +A Sbjct: 37 ESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIFDTMQHIK--PDVQTVCVGLA 94 Query: 108 ASAGYLISCAS 118 AS G + CA Sbjct: 95 ASMGAFLLCAG 105 >gi|69249001|ref|ZP_00604844.1| Peptidase S14, ClpP [Enterococcus faecium DO] gi|227550370|ref|ZP_03980419.1| endopeptidase Clp [Enterococcus faecium TX1330] gi|257879589|ref|ZP_05659242.1| peptidase S14 [Enterococcus faecium 1,230,933] gi|257882608|ref|ZP_05662261.1| peptidase S14 [Enterococcus faecium 1,231,502] gi|257885031|ref|ZP_05664684.1| peptidase S14 [Enterococcus faecium 1,231,501] gi|257888403|ref|ZP_05668056.1| peptidase S14 [Enterococcus faecium 1,141,733] gi|257890257|ref|ZP_05669910.1| peptidase S14 [Enterococcus faecium 1,231,410] gi|257893441|ref|ZP_05673094.1| peptidase S14 [Enterococcus faecium 1,231,408] gi|257897223|ref|ZP_05676876.1| peptidase S14 [Enterococcus faecium Com12] gi|257899224|ref|ZP_05678877.1| peptidase S14 [Enterococcus faecium Com15] gi|258616800|ref|ZP_05714570.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecium DO] gi|260559746|ref|ZP_05831926.1| peptidase S14 [Enterococcus faecium C68] gi|261207321|ref|ZP_05922008.1| peptidase S14 [Enterococcus faecium TC 6] gi|289566520|ref|ZP_06446943.1| Clp protease [Enterococcus faecium D344SRF] gi|293377995|ref|ZP_06624173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium PC4.1] gi|293557243|ref|ZP_06675791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1039] gi|293559757|ref|ZP_06676278.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1162] gi|293567607|ref|ZP_06678951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1071] gi|293570370|ref|ZP_06681427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E980] gi|294616541|ref|ZP_06696319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1636] gi|294618382|ref|ZP_06697960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1679] gi|294623239|ref|ZP_06702110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium U0317] gi|314938917|ref|ZP_07846184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a04] gi|314943860|ref|ZP_07850593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133C] gi|314948100|ref|ZP_07851501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0082] gi|314951634|ref|ZP_07854679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133A] gi|314993860|ref|ZP_07859194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133B] gi|314996702|ref|ZP_07861725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a01] gi|68194308|gb|EAN08823.1| Peptidase S14, ClpP [Enterococcus faecium DO] gi|227180509|gb|EEI61481.1| endopeptidase Clp [Enterococcus faecium TX1330] gi|257813817|gb|EEV42575.1| peptidase S14 [Enterococcus faecium 1,230,933] gi|257818266|gb|EEV45594.1| peptidase S14 [Enterococcus faecium 1,231,502] gi|257820883|gb|EEV48017.1| peptidase S14 [Enterococcus faecium 1,231,501] gi|257824457|gb|EEV51389.1| peptidase S14 [Enterococcus faecium 1,141,733] gi|257826617|gb|EEV53243.1| peptidase S14 [Enterococcus faecium 1,231,410] gi|257829820|gb|EEV56427.1| peptidase S14 [Enterococcus faecium 1,231,408] gi|257833788|gb|EEV60209.1| peptidase S14 [Enterococcus faecium Com12] gi|257837136|gb|EEV62210.1| peptidase S14 [Enterococcus faecium Com15] gi|260074414|gb|EEW62736.1| peptidase S14 [Enterococcus faecium C68] gi|260078381|gb|EEW66085.1| peptidase S14 [Enterococcus faecium TC 6] gi|289161674|gb|EFD09551.1| Clp protease [Enterococcus faecium D344SRF] gi|291589708|gb|EFF21512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1071] gi|291590588|gb|EFF22319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1636] gi|291595359|gb|EFF26674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1679] gi|291597346|gb|EFF28526.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium U0317] gi|291600607|gb|EFF30911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1039] gi|291606305|gb|EFF35718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1162] gi|291609548|gb|EFF38813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E980] gi|292643360|gb|EFF61492.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium PC4.1] gi|313589140|gb|EFR67985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a01] gi|313591670|gb|EFR70515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133B] gi|313596230|gb|EFR75075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133A] gi|313597478|gb|EFR76323.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133C] gi|313641791|gb|EFS06371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a04] gi|313645436|gb|EFS10016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0082] Length = 197 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 33/190 (17%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AI+ + VK Sbjct: 30 IMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGMAIYDTMNFVK--AD 87 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V T V MAAS G + A G+ G F P + + + Sbjct: 88 VQTIVMGMAASMGSFLLTA------------GTKGKRFALPNAEIMIHQ----------- 124 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE- 217 P+ +E+ A ++Q + ++++E P + +D + AE Sbjct: 125 PLGGAQGQATEIEIAARHILQ-----TRERLNKILAERTGQPLEVIEKDTDRDNYMTAEQ 179 Query: 218 AKKVGLIDVV 227 AK GLID V Sbjct: 180 AKAYGLIDEV 189 >gi|326693258|ref|ZP_08230263.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc argentinum KCTC 3773] Length = 200 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 41 IAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + ++G+IEDS ++ ++ + D + + ++SPGGS AG +I + +K P Sbjct: 28 VLVQGEIEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIK--AP 85 Query: 99 VITEVHEMAASAGYLISCAS 118 V T V +AAS G +I+ + Sbjct: 86 VTTIVMGLAASMGTIIASSG 105 >gi|325104589|ref|YP_004274243.1| Endopeptidase Clp [Pedobacter saltans DSM 12145] gi|324973437|gb|ADY52421.1| Endopeptidase Clp [Pedobacter saltans DSM 12145] Length = 246 Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D+ + + ++SPGGS YAG I+ +Q + V T MAAS G ++ CA Sbjct: 102 DAKRDIQIYINSPGGSVYAGLGIYDTMQFIS--PDVATICTGMAASMGAVLMCAG 154 >gi|182417589|ref|ZP_02948911.1| Clp protease [Clostridium butyricum 5521] gi|237667767|ref|ZP_04527751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378544|gb|EDT76073.1| Clp protease [Clostridium butyricum 5521] gi|237656115|gb|EEP53671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium butyricum E4 str. BoNT E BL5262] Length = 201 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ D+ Q ++ ++ + +D + + ++SPGGS AG AI+ +Q + Sbjct: 30 IMLSGEVNDASAQLIVAQLLFLDSEDPDKDISLYINSPGGSVTAGMAIYDTMQLIN--AD 87 Query: 99 VITEVHEMAASAG-YLISCAS 118 V T MAAS G +L+SC + Sbjct: 88 VSTICVGMAASMGAFLLSCGA 108 >gi|237812956|ref|YP_002897407.1| peptidase S14, ClpP [Burkholderia pseudomallei MSHR346] gi|237505260|gb|ACQ97578.1| peptidase S14, ClpP [Burkholderia pseudomallei MSHR346] Length = 366 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 35/180 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + +++ ++ D A+++ V+++S GG + AI+ A+++ + V V +AA Sbjct: 36 DAQNFVSQLDAVAAD--ASSITVAINSMGGDVFDAFAIYNALRRYAGK--VKGRVDGIAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA L+ A + I E +L ++ +P+ + Sbjct: 92 SAASLVLMACDEIEMPENAL-----LMIHHPHT-------------------------VA 121 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 K ++ + +++D++ + + + D + D W T A+AK+ G DV+ Sbjct: 122 AGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|118442934|ref|YP_878200.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi NT] gi|118133390|gb|ABK60434.1| ATP-dependent clp protease proteolytic subunit [Clostridium novyi NT] Length = 233 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 37/185 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + LI ++ I +DS +++ L++ GG AG AI I + KP ++ + Sbjct: 60 EHLIPQLVDIETNDSIEGVLIILNTVGGDVEAGLAIAEMINSLS--KPSVS----LVIGG 113 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G+ I + +A+ S + + +P L LGV P F Sbjct: 114 GHSIGVP--LATSADYSFISPSATMIIHPIRMNGL-VLGV-------------PQTFEYF 157 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD------GRIWTGAEAKKVGLI 224 N +M + ++D F+ S+ +N + K ++ +D G I G +A GLI Sbjct: 158 N----KMQERIID-----FITRTSKMKNETFRKLMLQTDDLLNDMGTILIGKQAVDYGLI 208 Query: 225 DVVGG 229 D VGG Sbjct: 209 DEVGG 213 >gi|88808603|ref|ZP_01124113.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] gi|88787591|gb|EAR18748.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] Length = 196 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++ ++ + +D + + ++SPGGS Y G IF +Q +K V T +A Sbjct: 37 ESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIFDTMQHIK--PDVQTVCVGLA 94 Query: 108 ASAGYLISCAS 118 AS G + CA Sbjct: 95 ASMGAFLLCAG 105 >gi|229494686|ref|ZP_04388444.1| Clp protease [Rhodococcus erythropolis SK121] gi|229318353|gb|EEN84216.1| Clp protease [Rhodococcus erythropolis SK121] Length = 202 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ D+ + + + ++ D +++ ++SPGGS +AG AI+ ++ + N Sbjct: 25 ILLTGEVNDAMAERVCSELVLLATTDPKRDVVLYINSPGGSVFAGLAIYDTMKLIPN--D 82 Query: 99 VITEVHEMAASAGYLISCASN 119 V+T AAS G ++ C+ Sbjct: 83 VVTVAMGFAASMGQVLLCSGT 103 >gi|254431764|ref|ZP_05045467.1| Clp protease [Cyanobium sp. PCC 7001] gi|197626217|gb|EDY38776.1| Clp protease [Cyanobium sp. PCC 7001] Length = 200 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 38 VARIAIRG-QIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V RI G ++ D+ L+ ++ + +DS+ + + ++SPGGS AG AI+ +Q VK Sbjct: 29 VERILFMGSEVNDAVANALVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMQYVK 88 Query: 95 NRKPVITEVHEMAASAGYLISCASN 119 + V+T +AAS G + A Sbjct: 89 SD--VVTICVGLAASMGAFLLGAGT 111 >gi|229815654|ref|ZP_04445981.1| hypothetical protein COLINT_02705 [Collinsella intestinalis DSM 13280] gi|229808884|gb|EEP44659.1| hypothetical protein COLINT_02705 [Collinsella intestinalis DSM 13280] Length = 199 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 + I G+IE + L + + + R+D ++ + + +SSPGG G AI+ ++ V P Sbjct: 33 LVISGEIEPLMASALCQHVLFLEREDPSSPITLFVSSPGGQVGPGLAIYDVLRSVSC--P 90 Query: 99 VITEVHEMAASAGYLISCASN 119 + T ++AAS G +I A + Sbjct: 91 IRTVCGDLAASMGSIIFMAGD 111 >gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W1] gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W1] Length = 195 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 34/192 (17%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 28 RIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIK-- 85 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS G + A G+ G F P + + + Sbjct: 86 PDVQTICIGMAASMGSFLLAA------------GAKGKRFALPNAEVMIHQ--------- 124 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P+ +E+ A +++ + R+++E +K +D T Sbjct: 125 --PLGGAQGQATEIEIAANHILK-----TREKLNRILAERTGQSIEKIQQDTDRDNFLTA 177 Query: 216 AEAKKVGLIDVV 227 EAK GLID V Sbjct: 178 EEAKSYGLIDEV 189 >gi|170723514|ref|YP_001751202.1| peptidase S14 ClpP [Pseudomonas putida W619] gi|169761517|gb|ACA74833.1| peptidase S14 ClpP [Pseudomonas putida W619] Length = 620 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 + V ++SPGGS AI+ ++K R I V + ASA L++ A++ IV AE SL Sbjct: 27 ITVQINSPGGSVTDALAIYTVLRKHTGRVTAI--VDGLCASAATLVALAADEIVMAEHSL 84 Query: 129 V 129 + Sbjct: 85 M 85 >gi|111018525|ref|YP_701497.1| endopeptidase Clp [Rhodococcus jostii RHA1] gi|226360644|ref|YP_002778422.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus B4] gi|116243124|sp|Q0SGJ7|CLPP3_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|110818055|gb|ABG93339.1| endopeptidase Clp [Rhodococcus jostii RHA1] gi|226239129|dbj|BAH49477.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus B4] Length = 202 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G+++D+ + + ++ D +++ ++SPGGS +AG AI+ ++ V N Sbjct: 25 ILLTGEVDDAMAERACSELVLLAAADPKRDIVLYINSPGGSVFAGLAIYDTMKLVPN--D 82 Query: 99 VITEVHEMAASAGYLISCASN 119 V+T AAS G ++ C+ Sbjct: 83 VVTVAMGFAASMGQVLLCSGT 103 >gi|310779736|ref|YP_003968068.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926] gi|309749059|gb|ADO83720.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926] Length = 361 Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 2/63 (3%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A ++V ++SPGG + +AI+ +++ + VI + +AASA +I+ A + I+ E Sbjct: 50 AEEILVRINSPGGDVFEAQAIYNSLK--NHPAKVIVRIDALAASAATVIAMAGDEILMPE 107 Query: 126 TSL 128 ++ Sbjct: 108 NAI 110 >gi|156037438|ref|XP_001586446.1| hypothetical protein SS1G_12432 [Sclerotinia sclerotiorum 1980] gi|154697841|gb|EDN97579.1| hypothetical protein SS1G_12432 [Sclerotinia sclerotiorum 1980 UF-70] Length = 198 Score = 35.4 bits (80), Expect = 10.0, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G+++ S ++ ++ + D A+ + ++SPGGS AG AI+ + +K+ P Sbjct: 24 ICLNGEVDSSLSAAVVAQLLYLESDAPEKAITLYINSPGGSVTAGLAIYDTMTYIKS--P 81 Query: 99 VITEVHEMAASAGYLISCASN 119 V T AAS G L+ C Sbjct: 82 VSTVCVGQAASMGSLLLCGGE 102 Searching..................................................done Results from round 2 >gi|254780747|ref|YP_003065160.1| putative protease IV transmembrane protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040424|gb|ACT57220.1| putative protease IV transmembrane protein [Candidatus Liberibacter asiaticus str. psy62] Length = 293 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 293/293 (100%), Positives = 293/293 (100%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI Sbjct: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI Sbjct: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD Sbjct: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL Sbjct: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP Sbjct: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 >gi|315121910|ref|YP_004062399.1| putative protease IV transmembrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495312|gb|ADR51911.1| putative protease IV transmembrane protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 295 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 157/290 (54%), Positives = 221/290 (76%), Gaps = 2/290 (0%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRDD 64 K IK R+++ L+ L + YF+W S D +PHVARI I G I +D+++L++RI R+ DD Sbjct: 6 KNIKKRHIVYLLIALGITYFAWDSIFPDRTPHVARITISGSIGDDNEDLLDRIHRVGTDD 65 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 SA AL++ +SSPGG+ Y E++F A++KVK RKPV+T V +AAS GYLISCASN I+A+ Sbjct: 66 SAKALVLWISSPGGTVYGSESLFEAVKKVKLRKPVVTLVGGVAASGGYLISCASNAIIAS 125 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++S++GSIGV YP KPFLDKLG+S++++KSSP+K EPSP+S+ NP+ +Q ++++V+ Sbjct: 126 QSSIIGSIGVFLSYPQFKPFLDKLGISVETIKSSPLKGEPSPYSKPNPQTIQNLKELVND 185 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 YHWFV+LVSE R+IPYDK L LS G +W+G +AKK+GLID +GG +EVW+SLY+LGVD+ Sbjct: 186 EYHWFVKLVSEERHIPYDKALTLSSGLVWSGTKAKKLGLIDAIGGNDEVWKSLYSLGVDK 245 Query: 245 SIRKIKDWNPPKNYWFCDLK-NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 ++ IKDW PKNYWF D + S LED++P ++Q +GL AVW P Sbjct: 246 DVKIIKDWKSPKNYWFFDFNFKKYVKSTLEDSVPFIRQANFEGLLAVWRP 295 >gi|206889350|ref|YP_002249562.1| signal peptide peptidase SppA, 36K type [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741288|gb|ACI20345.1| signal peptide peptidase SppA, 36K type [Thermodesulfovibrio yellowstonii DSM 11347] Length = 285 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 154/288 (53%), Gaps = 10/288 (3%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 KK+K ++++ + L + + + VA + I+G I DS+ I+ I++ +D S Sbjct: 4 KKLKFFFIIIGTLIL-ISFLITIMESSLTAGKVAIVNIKGIIVDSKPSIDEIKQYRKDPS 62 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ + SPGG+ + I+ I++ KPV+ + +AAS GY ISC + I+A Sbjct: 63 IKAIVLRVDSPGGAVVPSQEIYEEIKRTIKSKPVVVSMGSIAASGGYYISCPATKIIANP 122 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +L GSIGVL + P +K LDK+GV + +KS K SPF + + +++Q + + Sbjct: 123 GTLTGSIGVLIEIPNIKGLLDKIGVKAEVIKSGKYKDITSPFKPLQNEEKEILQKLTNDV 182 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + F++ V+E R +P + ++DGR++TG +AK++GL+D +G + + L + Sbjct: 183 HEQFIKAVAEGRKVPVEDIKKIADGRVFTGLKAKELGLVDEIGDLDYAIKIAAQLAKIKG 242 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 +I K+ D + SL++ +P M+ ++ +++P Sbjct: 243 EPEIVT---KKSTLLIDFLKGNTESLVKKILPYMQ------VYYLYSP 281 >gi|258592126|emb|CBE68431.1| Signal peptide peptidase SppA, 36K type precursor [NC10 bacterium 'Dutch sediment'] Length = 290 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 147/286 (51%), Gaps = 4/286 (1%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 I V +SL+ L + FS+ VA I + G I DS+E+IE++E+ + S Sbjct: 7 IVGLTVFVSLLILFSLAFSFGRWERLGGSKVALITVDGVILDSKEIIEQLEKYRTNPSVK 66 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++SPGG + I + K + +KP++ + +AAS GY I+ A+++IVA Sbjct: 67 AIVLRINSPGGGVAPSQEIHEEVLKTRQTDKKPIVASMGSVAASGGYYIASATDLIVANP 126 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGV+ Q P + + K+GV VKS K SP E+ Q++Q ++D Sbjct: 127 GTITGSIGVVLQVPNISGLMQKIGVKSVVVKSGLHKDLASPTREMTDAERQILQGMLDDV 186 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + F+ V+ R I K ++DGRI++G EA+ +GL+D +G ++ + AL + Sbjct: 187 HGQFIDAVAMGRRIDRKKVETMADGRIFSGREAQSLGLVDQLGNLQDAIERAGALAGIRG 246 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + + DL S+ SLL +P+ + + + +W Sbjct: 247 KPTVIQER-KRGLLLMDLLRGSL-SLLNIDVPIYSPSTLSVNYLLW 290 >gi|225849223|ref|YP_002729387.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium azorense Az-Fu1] gi|225643770|gb|ACN98820.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium azorense Az-Fu1] Length = 276 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 144/262 (54%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 + V++ LV + +V++ SS E + P VA I + I D E + I + +D+S A+ Sbjct: 2 FKKVLIGLVAIFIVFYIISSLKETSKPKVALIRVNDTIMDHMETVSNIAQAEKDESIKAV 61 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++++ SPGG+ A + I+RAI+K++ +KPV+ + +AAS GY IS +N+I A ++ Sbjct: 62 VIAVDSPGGAVGASQEIYRAIEKLREKKPVVVSMGNVAASGGYYISAPANVIYANPGTIT 121 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ Q + L+K+GV + +VKS K P + P+ Q+++ V Y F Sbjct: 122 GSIGVIIQQVDLSEVLNKIGVKVNTVKSGENKDILYPTKPLTPEQKQILEKTVMDVYDQF 181 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + + + R I + +DGR+++G EA+K+GLID +G ++ + LG + Sbjct: 182 LDAIVKYRPIKKEVLKTYADGRVFSGREAQKIGLIDKLGNIQDAVKEAKKLGKLPEDAPV 241 Query: 250 KDWNPPKNYWFCDLKNLSISSL 271 + PPK LK+ S+ Sbjct: 242 IEIKPPKPLLEELLKSKFGISI 263 >gi|289549221|ref|YP_003474209.1| signal peptide peptidase SppA, 36K type [Thermocrinis albus DSM 14484] gi|289182838|gb|ADC90082.1| signal peptide peptidase SppA, 36K type [Thermocrinis albus DSM 14484] Length = 282 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 81/296 (27%), Positives = 150/296 (50%), Gaps = 25/296 (8%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 M +K++ + +L + + + + +A + + G I D Q ++ ++E+ Sbjct: 1 MGRWIKRVLIFFGILFSLGMLGTFLARFPI----GDRIAVVKVEGVITDPQAVVSKMEKA 56 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASN 119 D S AL++ + SPGGS A + I+R +++ + KPV+ + +AAS GY IS +N Sbjct: 57 RLDPSVKALVLRVESPGGSVGASQEIYREVERFRQSGKPVVVSMGNVAASGGYYISAPAN 116 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 +I A ++ GSIGV+ Q+ V+ L+KLG+ ++K+ K SPF E+ P+ Q +Q Sbjct: 117 VIYANPGTITGSIGVIIQHTDVQQLLEKLGIKTTAIKTGKFKDTLSPFRELTPEERQYLQ 176 Query: 180 DVVDSSYHWFVRLVSESRNIPYDK--TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++V+ +Y F+ + R + ++DGRI TG +AK++GL+D +G ++ Q Sbjct: 177 NLVEDAYSQFIEAILRYRKGKVQEDILRQIADGRILTGKQAKELGLVDELGDLQDAIQKA 236 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L P ++ + K + +LE +P ++Q VW+P Sbjct: 237 KELARV----------PQARVFYMEDKKGFLKRMLEGKVPSLQQ--------VWSP 274 >gi|325294625|ref|YP_004281139.1| signal peptide peptidase SppA, 36K type [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065073|gb|ADY73080.1| signal peptide peptidase SppA, 36K type [Desulfurobacterium thermolithotrophum DSM 11699] Length = 292 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 150/282 (53%), Gaps = 7/282 (2%) Query: 5 LKKIKTRYVMLSLVTLTVVYFS-----WSSHVEDNSPHVARIAIRGQIEDSQELIERIER 59 ++++K + L +V ++ FS +SS V + + + G I+ S ++ +++ Sbjct: 1 MRRLKKFFTFLGIVFFILILFSIFKGFFSSKVAVPGEKIGVVKVEGVIKRSDTYVKLLDK 60 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + R+ A+++ + SPGG A + I+ ++++ +KP++ + +AAS G IS + Sbjct: 61 LERNKEIKAIVLRVDSPGGVVGACQEIYDKVKEITKKKPIVVSMGSIAASGGLYISVPAT 120 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA ++ GSIGV+ Q VK DK+G+ + +VKS K +PF E + ++Q++Q Sbjct: 121 KIVANPGTITGSIGVILQAYNVKELADKVGIKVITVKSGKFKDLLNPFREPDKGSLQILQ 180 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +++ SY FV V++ R +P +K +DGR++TG +AKK+GL+D +GG E+ + Sbjct: 181 ALINDSYEQFVEAVAKGRKLPIEKVKKFADGRVFTGRQAKKLGLVDELGGFEKAVEIARK 240 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 L S + + P+ + L +L + ++ Sbjct: 241 LSKSPSAKVFEA--KPERTFLQKLLGEKTEGMLNNLSRVLNG 280 >gi|302390807|ref|YP_003826627.1| signal peptide peptidase SppA, 36K type [Acetohalobium arabaticum DSM 5501] gi|302202884|gb|ADL11562.1| signal peptide peptidase SppA, 36K type [Acetohalobium arabaticum DSM 5501] Length = 326 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 23/299 (7%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVV-------YFSWSSHVEDNSPHVARIAIRGQIE----- 48 M F +KK+ ++ L+ L ++ + + +A I I G I Sbjct: 1 MGFSIKKMTVSILLSFLIILVILGGLGFLLINFLGNSDQAGVESIAVINIHGPISVGGTQ 60 Query: 49 --------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPV 99 ++ E+I++I + AL++ ++SPGGS+ A + I+R ++K K KPV Sbjct: 61 EVLSTSQTNASEVIKQINEAKDNKKIKALLLRVNSPGGSSAASDEIYRELKKFKKTGKPV 120 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + ++A S GY IS ++ I A +++ GSIGV+ Q+ ++ DKLGV + KS P Sbjct: 121 VISMGDIATSGGYYISAIADQIYANPSTITGSIGVIMQFKNLQDLYDKLGVDSITFKSGP 180 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 K +P ++ + +++Q++VD Y F+ V+E R++ K L+DGRI+ G +AK Sbjct: 181 YKDIGNPDRKLTAEEKELLQNMVDEVYQEFLTAVAEGRSMSKSKVEKLADGRIYNGRKAK 240 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKNYWFCDLKNLSISSLLEDTI 276 K+GL+D +G + ++ L ++ + +N P +F NL LL+ + Sbjct: 241 KLGLVDEMGTFYDAVKTTAKLAEMKADPNLIYYNRSSPLERFFRSTTNLIKGVLLQQGL 299 >gi|302390691|ref|YP_003826512.1| signal peptide peptidase A [Thermosediminibacter oceani DSM 16646] gi|302201319|gb|ADL08889.1| signal peptide peptidase A [Thermosediminibacter oceani DSM 16646] Length = 307 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 142/263 (53%), Gaps = 16/263 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNS-----PHVARIAIRGQI----------EDS 50 K++ T +++ ++ + F+ E+ S V I + G I S Sbjct: 5 KRLITIALIVLVIASVIAAFALGPGREEGSTAAEDNMVGVINLEGVITGGSGDAFLSSGS 64 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++ ++ S+D S AL++ ++SPGGSA A + I++ + KVK K V+ + ++AAS Sbjct: 65 DHIVHQLHEASQDPSIKALVIRINSPGGSAAASQEIYQEVLKVKEAGKKVVVSMGDVAAS 124 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A++ IVA ++ GSIGV+ ++ V+ +KLG+ + +KS+ K SP Sbjct: 125 GGYWVASAADKIVANPATITGSIGVIMEFQNVEGLFEKLGLKVNVIKSAEHKDIGSPTRP 184 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + + Q +VD Y+ F+ +V++ R + +K L+DGRI+TG +AK++GL+D +G Sbjct: 185 MTEEERAIFQGMVDDIYNQFIDVVAKGRKMDREKVKELADGRIFTGRQAKELGLVDELGN 244 Query: 230 QEEVWQSLYALGVDQSIRKIKDW 252 + + L + +IK++ Sbjct: 245 FYDALKIAAELAGIEGEPEIKEY 267 >gi|218440875|ref|YP_002379204.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7424] gi|218173603|gb|ACK72336.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7424] Length = 605 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 14/282 (4%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSS 75 F + E S +A + G+I D Q + + +I +D + A+++ ++S Sbjct: 305 FLRENQNESASNQIAVVYAEGEIVDGQGAVSNIGGERFAKELRKIRQDPNVKAVVLRINS 364 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGGSA A + I R ++ +K +KPVI + +AAS GY I+ +N I A +++ GSIGV Sbjct: 365 PGGSATASDIIGREVKLMKEKKPVIVSMGNVAASGGYWIATEANHIFAEPSTITGSIGVF 424 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 V+ + G++ VK++ + + + + + Q V Y+ FV V++ Sbjct: 425 GMLFNVQDIANNNGITWDVVKTAKLADLGTTTRPKTEQELAIYQRSVQQIYNLFVNKVAQ 484 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 SRN+P K +++GR+W+G +AK++GL+D +GG E + +I+++ Sbjct: 485 SRNLPESKVKQIAEGRVWSGEDAKQLGLVDEIGGLEAAILYAAKEAKLEKNWEIQEYPRR 544 Query: 256 KNYWFCDLKNLSISSLLEDTIPL-----MKQTKVQGLWAVWN 292 + + L+ L S + E P + K++ AV+ Sbjct: 545 RTFESIILERLFTSKITESITPSPDSLTAEMLKLKEDLAVFQ 586 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 110/284 (38%), Gaps = 25/284 (8%) Query: 21 TVVYFSWSSHVEDNSP----HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSP 76 +++ F S ++D P A ++++ IE+ ++D A+ + Sbjct: 50 SILVFDLSMQIQDTKPPSTLTQALQNDDTVTMTLRQVLGVIEKATKDAQIEAIFID---- 105 Query: 77 GGSAYAGE-------AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 G + + + ++K + I Y + ++ I+ ++ Sbjct: 106 -GRGIEADNGIATLTEVRQGLEKFRAAGKKIIFYDVDLNEKSYYLGSVADEIILNPMGMM 164 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYH 187 G+ Q ++ L+K G+ I+ ++ KA PF ++P+ Q +++ + Sbjct: 165 EFNGIGTQPLFLAGALEKYGIGIQVIRVGEFKAAVEPFIRQTMSPENRLQTQVLLNDLWT 224 Query: 188 WFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + V +SRN+ +K ++D G + EA+K+GLID V +EV L L S Sbjct: 225 NVLTTVGKSRNVTPNKLQAIADNQGMLMP-TEAEKIGLIDRVAYFDEVVTDLKTLTGKTS 283 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + NP + + S L + ++ ++A Sbjct: 284 ----ESENPDEKSFPQISVENYASGFLRENQNESASNQIAVVYA 323 >gi|20807332|ref|NP_622503.1| periplasmic serine protease (ClpP class) [Thermoanaerobacter tengcongensis MB4] gi|20515846|gb|AAM24107.1| Periplasmic serine proteases (ClpP class) [Thermoanaerobacter tengcongensis MB4] Length = 305 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 12/289 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL----------IERI 57 I + L +L + S S +S + + I G I D + +E+I Sbjct: 11 ILALVFAIVLASLFLTQPSTESQKTVSSNTIGVVTIEGVIGDFSNILGIPQFTPDPVEQI 70 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 R D++ A++V ++SPGGSA I+ ++++K K VI + + AAS GY+ +C Sbjct: 71 RRAQEDNTVKAIVVKINSPGGSAAKSVEIYTELKRLKETGKKVIVSMGDAAASGGYMAAC 130 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 +IIVA ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ + Sbjct: 131 GGDIIVANPATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDMGSPTRDLTPEEKK 190 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++Q ++D +Y FV +VSE R +P +K L+DGRI+TG +A KVGL+D +G + Sbjct: 191 ILQGIIDDTYEQFVEIVSEGRKMPIEKVKELADGRIFTGRQALKVGLVDKLGDFYDAVDI 250 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 Q +K + P N + S+L + +++ + Sbjct: 251 AAKEAGIQGKPVLKYYTTP-NPLSILFGGGAKSNLEGTGLEILRLLFID 298 >gi|254478286|ref|ZP_05091666.1| signal peptide peptidase SppA, 36K type [Carboxydibrachium pacificum DSM 12653] gi|214035751|gb|EEB76445.1| signal peptide peptidase SppA, 36K type [Carboxydibrachium pacificum DSM 12653] Length = 306 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 13/290 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----------SQELIER 56 I + L +L + S S +S + + I I D + + +E+ Sbjct: 11 ILVLVFAIVLASLFLTQPSTESQKTVSSNTIGVVTIEEVIGDVSSNILGIPQFTSDPVEQ 70 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 I R D++ A++V ++SPGGSA I+ ++++K K VI + + AAS GY+ + Sbjct: 71 IRRAQEDNTVKAVVVKINSPGGSAAKSVEIYTELKRLKETGKKVIVSMGDAAASGGYMAA 130 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 C +IIVA ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ Sbjct: 131 CGGDIIVANPATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDMGSPTRDLTPEEK 190 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +++Q ++D +Y FV +VSE R +P +K L+DGRI+TG +A KVGL+D +G + Sbjct: 191 RILQGIIDDTYEQFVEIVSEGRKMPIEKVKELADGRIFTGRQALKVGLVDKLGDFYDAVD 250 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + +K + P + W + + S+L E + ++K + Sbjct: 251 IAAKEAGIKGKPVLKYYTTP-SPWSILFGSTAQSTLQERGLEILKVLFID 299 >gi|110635996|ref|YP_676204.1| signal peptide peptidase A [Mesorhizobium sp. BNC1] gi|110286980|gb|ABG65039.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Chelativorans sp. BNC1] Length = 322 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 99/270 (36%), Positives = 167/270 (61%), Gaps = 13/270 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 PH+A++ I G I + ++L++ +E + + +IV++ SPGG+ GEAI+ AI+++ Sbjct: 48 GPHIAQVRIEGTILEDKDLLDVLEDVRESSAVQGVIVTVDSPGGTTAGGEAIYEAIRQLA 107 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV+ +V +AASAGY+++ A++ IVA +TS+VGSIGV+ QYP V L KLGV ++ Sbjct: 108 EAKPVVAQVGTLAASAGYMVASAADHIVARQTSIVGSIGVIIQYPDVTDLLSKLGVKVEE 167 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KAEPSPF+ + QM+ +++ SY+WFV L+S+ R +P ++ + L+DG I+T Sbjct: 168 VKSSPLKAEPSPFNPTTDQERQMLAGMINDSYNWFVDLISQRRKLPRNEVVALADGSIFT 227 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY-----------WFCDL 263 G +A + L+D +GG++E L G+ + + +W P + W + Sbjct: 228 GRQALERKLVDALGGEDEAQAWLVDQGLSAEL-NVVEWKPRSSSGSIFLPTSVAAWLANA 286 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L +++L D + M+ + GL ++W P Sbjct: 287 LGLPQATMLLDRLG-MEHIFLDGLLSLWQP 315 >gi|319781468|ref|YP_004140944.1| signal peptide peptidase SppA, 36K type [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167356|gb|ADV10894.1| signal peptide peptidase SppA, 36K type [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 318 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 14/299 (4%) Query: 9 KTRYVMLSLVTLTVV----YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 R V + +V L V+ +F H+A++ I G I + +ELI+R+E I Sbjct: 20 FWRVVAIGIVALGVIALSTWFYGDDFGGSTVDHIAKVKIEGTITEDEELIKRLETIRLSS 79 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 +I+S+ SPGG+ GE+I+ ++K+ KPV+ EV +AASAGY+I+ A++ IVA Sbjct: 80 KVKGVILSIDSPGGTTVGGESIYEEVRKLAADKPVVAEVGTLAASAGYMIASAADHIVAR 139 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +TS+VGSIGVL QYP V +DKLGV ++ VKSSP+KA PSPF N M++ ++ Sbjct: 140 KTSIVGSIGVLIQYPDVSGLMDKLGVKLEEVKSSPLKAAPSPFKPTNDDERAMVRKLILD 199 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 SY+WFV +V+E R + ++ LVL+DG I+TG + GLID VGG+ L GVD Sbjct: 200 SYNWFVDIVAERRKMSREQALVLADGSIFTGRQGVANGLIDAVGGETVAIDWLATKGVDA 259 Query: 245 SIRKI--KDWNPPKNYWFCDLKNLSISSLL------EDTIPLM--KQTKVQGLWAVWNP 293 ++ + KD + F +I S L D I + + + GL +VW+P Sbjct: 260 KLKVVEWKDTERRGGFLFSKAMAQTIGSALGLPAYSSDVIHELGADRLFLDGLVSVWHP 318 >gi|13472792|ref|NP_104359.1| protease IV [Mesorhizobium loti MAFF303099] gi|14023539|dbj|BAB50145.1| protease IV [Mesorhizobium loti MAFF303099] Length = 318 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 111/299 (37%), Positives = 173/299 (57%), Gaps = 14/299 (4%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQIEDSQELIERIERISRDD 64 R + +V L V+ S + +D H+A++ I G I + +ELI+R+E I + Sbjct: 20 FWRVAAIGIVALGVIALSAWFYRDDLGGSTVDHIAKVRIEGTITEDEELIKRLEDIRKSS 79 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 +I+++ SPGG+ GE+I+ ++KV KPV+ EV +AASAGY+I+ A++ IVA Sbjct: 80 KVKGVILAIDSPGGTTVGGESIYEEVRKVAADKPVVAEVGTLAASAGYMIASAADHIVAR 139 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +TS+VGSIGVL QYP V +DKLG+ ++ VKSSP+KA PSPF N M++ ++ Sbjct: 140 KTSIVGSIGVLIQYPDVSGLMDKLGIKLEEVKSSPLKASPSPFKPTNDDERAMVRKLILD 199 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 SY WFV +V+E R + +++ L L+DG I+TG + GLID VGG+ E L GVD Sbjct: 200 SYDWFVGIVAERRKMTHEQALALADGSIFTGRQGVTNGLIDAVGGETEAIDWLATKGVDA 259 Query: 245 SIRKI--KDWNPPKNYWFCDLKNLSISSLL------EDTIPLM--KQTKVQGLWAVWNP 293 ++ + KD ++ + ++ S L D I + + + GL +VW+P Sbjct: 260 KLKVVEWKDTERRGSFLWSKAMVKTVGSALGLPGYSSDVIHELGADRLFLDGLVSVWHP 318 >gi|169832316|ref|YP_001718298.1| signal peptide peptidase SppA, 36K type [Candidatus Desulforudis audaxviator MP104C] gi|169639160|gb|ACA60666.1| signal peptide peptidase SppA, 36K type [Candidatus Desulforudis audaxviator MP104C] Length = 299 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 80/299 (26%), Positives = 144/299 (48%), Gaps = 19/299 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVED-----NSPHVARIAIRGQI----------- 47 + +KI ++ +V ++ S + I I G I Sbjct: 1 MRQKILAGVILGVVVLSLILVAVLGSRTGPEGRRATGEQIGLIRIEGMIIGGTEGSFFGL 60 Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 ++E+ +I+ + + + A+++ L+SPGGSA A + I A+ +++ KPV+ + + Sbjct: 61 GGAEEITAQIQEAADNPNIRAVVLRLNSPGGSAAASQEISEAVVRLREAGKPVVVSMGDT 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 +AS Y I+C ++ IVA ++ GSIGV+ Q ++ D LG+ ++ KS P K SP Sbjct: 121 SASGAYWIACHADAIVANPATITGSIGVIIQTTHLTDLYDMLGIETETFKSGPHKDMGSP 180 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 P+ + Q +VD Y FV +V+ RN+P D+ L+DGRI+TG +A ++GL+D Sbjct: 181 DRVPTPEERAIFQGMVDDIYAQFVAVVARGRNMPEDQVRKLADGRIFTGRQAYELGLVDQ 240 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 +G ++ ++ LG + + + +F D S L T L+ V+ Sbjct: 241 LGDLQDAVRAAAELGGLDPDAPVVELG--RRPFFRDFWGGLSSLLRPQTSWLLTAPPVE 297 >gi|237756040|ref|ZP_04584621.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium yellowstonense SS-5] gi|237691807|gb|EEP60834.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium yellowstonense SS-5] Length = 274 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 142/269 (52%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +++ ++ L V+++ S+ ++ P V I I G I D + + I + ++D+S A+++ Sbjct: 5 ILIGIIALIVIFYVISALRYESQPKVGLIRIEGTITDYLDTVSIISQATKDESIKAVVID 64 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG+ A + I+RAI+K++ +KPV+ + +AAS GY IS +N+I A ++ GSI Sbjct: 65 VDSPGGAVGASQEIYRAIEKLREKKPVVVSMGNVAASGGYYISAPANVIYANPGTITGSI 124 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ Q+ V L+K GV + ++KS K P + P+ +++ V Y F+ Sbjct: 125 GVIIQHVDVSEILNKFGVKVNTIKSGANKDILYPTKPLLPEQKALLEKTVMDVYDQFLDA 184 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + + R I D +DGR+++G EAK +GL+D +G ++ LG + + + Sbjct: 185 IVKYRPIKKDILKSYADGRVFSGNEAKALGLVDKIGNIQDAISEAKKLGKLKEDAPVIEL 244 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 P K+ + + ++ I M Sbjct: 245 KPKKSLLDEFMNSKFGMEKVKSGIYYMMS 273 >gi|153007511|ref|YP_001368726.1| signal peptide peptidase SppA [Ochrobactrum anthropi ATCC 49188] gi|151559399|gb|ABS12897.1| signal peptide peptidase SppA, 36K type [Ochrobactrum anthropi ATCC 49188] Length = 323 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 190/292 (65%), Gaps = 13/292 (4%) Query: 13 VMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 +L + L V+ SWS + N PH+A++ I G I +++EL++R+++I++DD+ +I+ Sbjct: 25 FLLLIAALIAVFASWSMRGTNFNQPHIAKVRIEGTIFENEELLKRLDKIAKDDAVKGVIL 84 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 L SPGG+ GEAIF A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGS Sbjct: 85 VLDSPGGTTVGGEAIFEAVRKIAEKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGS 144 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGVLFQYP V LD +GV ++++KSSP+KAEP+ FS + +A M+++++ SY WFV Sbjct: 145 IGVLFQYPDVSKLLDTIGVKVETIKSSPLKAEPNYFSPASEEAKGMIRNMIMDSYAWFVD 204 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 +V + R+ +++ L L++G ++TG +A LID +GG+EE L + G+ + + ++ + Sbjct: 205 IVEKRRSFTHEQALALANGAVFTGRQALDKKLIDGLGGEEEAVAWLASKGLSKDLPRL-E 263 Query: 252 WNPPKNYWFCDLKNLSISSLL------EDTIPLMKQTK-----VQGLWAVWN 292 W P + L++L I + ++ ++KQ + GL +VW+ Sbjct: 264 WKPVSSETGFSLRDLIIHAGARLLRVPQEADGMLKQIAKERIFLDGLLSVWH 315 >gi|188996018|ref|YP_001930269.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium sp. YO3AOP1] gi|188931085|gb|ACD65715.1| signal peptide peptidase SppA, 36K type [Sulfurihydrogenibium sp. YO3AOP1] Length = 274 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 136/253 (53%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +++ ++ L V+++ S+ ++ P V I I G I D + + I ++D+S A+++ Sbjct: 5 ILIGIIALIVIFYIISALRYESQPKVGLIRIEGTIVDYLDTVSIISEATKDESIKAVVID 64 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG+ A + I+RAI+K++ +KPV+ + +AAS GY IS +N+I + ++ GSI Sbjct: 65 VDSPGGAVGASQEIYRAIEKLREKKPVVVSMGNVAASGGYYISTPANVIYSNPGTITGSI 124 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ Q+ V L+K GV + ++KS K P + P+ +++ V Y F+ Sbjct: 125 GVIIQHVDVSEILNKFGVKVNTIKSGANKDILYPTKPLLPEQKALLEKTVMDVYDQFLDA 184 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 ++ R I D +DGR+++G EAK +GL+D +G ++ LG + + + Sbjct: 185 IARYRPIKKDVLKSYADGRVFSGNEAKALGLVDKIGNIQDAISEAKKLGKLEEDAPVIEL 244 Query: 253 NPPKNYWFCDLKN 265 P K + + Sbjct: 245 KPKKPLLDELMNS 257 >gi|116749550|ref|YP_846237.1| signal peptide peptidase SppA, 36K type [Syntrophobacter fumaroxidans MPOB] gi|116698614|gb|ABK17802.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Syntrophobacter fumaroxidans MPOB] Length = 290 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 137/272 (50%), Gaps = 3/272 (1%) Query: 5 LKKIKTRYVMLSLVTL---TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 +K+ ++++S V S S + + I+G I ++ E+++ I+ Sbjct: 1 MKRRTLWFIVISFFVFCGFIVWLLGSDSDFFKGSNRIGVVEIKGTISNASEVLKSIKEFR 60 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 +D S A++V + SPGG + I+R +++ KPV+ + +AAS GY I+ A+N I Sbjct: 61 KDQSIRAILVRIDSPGGGVGPSQEIYRELKRTIKHKPVVASLGGIAASGGYYIASAANRI 120 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA+ ++ GSIGV+ P ++ K+G + ++K+ K +P E+ P+ ++MQ Sbjct: 121 VASPGTITGSIGVIMYLPMLRDLFGKIGYEMVTIKAGRYKDIGNPGREMTPEEKEIMQAS 180 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D ++ F+R V+ R +P +K ++DGRI G AK++GL+D +G E+ + ALG Sbjct: 181 MDEAHRQFIRDVAAGRKMPEEKIREIADGRIILGQTAKELGLVDELGNFEDAVDAAVALG 240 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + I + L S L Sbjct: 241 HVKGEADIVYAKKKRMSLLDLLLGSDASEKLS 272 >gi|77919477|ref|YP_357292.1| signal peptide peptidase SppA, 67K type [Pelobacter carbinolicus DSM 2380] gi|77545560|gb|ABA89122.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pelobacter carbinolicus DSM 2380] Length = 298 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 2/257 (0%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + + I G + S+ ++++ D S A+I+ ++SPGG+ + I + +V Sbjct: 40 GERIGVVEISGMLMVSEPTVKQLVSFKEDHSIKAVILRVNSPGGAVAPSQEIHDEVARVA 99 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV+ + +AAS GY +S + IVA ++ GSIGV+ Q + DKLG+ + Sbjct: 100 ALKPVVVSMASVAASGGYYVSIPAQRIVANPGTITGSIGVIMQTTNYQELYDKLGLKNEV 159 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKS K SP + P +++Q V+D Y FV VS+ R +P +K L+DGRI+T Sbjct: 160 VKSGQHKDLGSPLRPMTPADRKILQGVIDDVYDQFVSAVSKGRKLPVEKVRTLADGRIFT 219 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 G +A + GL+D +GG ++ L K+ K S+S + Sbjct: 220 GRQAMQAGLVDSLGGMQDAVAIASELAGISGEPKLVYPPKDKESLLKYFIEESVSQ-VGR 278 Query: 275 TIPLMKQTKVQGLWAVW 291 + +Q + +W Sbjct: 279 ALQQRQQGS-PAMQYLW 294 >gi|307267146|ref|ZP_07548655.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter wiegelii Rt8.B1] gi|326390690|ref|ZP_08212244.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter ethanolicus JW 200] gi|306917831|gb|EFN48096.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter wiegelii Rt8.B1] gi|325993227|gb|EGD51665.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter ethanolicus JW 200] Length = 304 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 152/298 (51%), Gaps = 17/298 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDSQEL---- 53 + KK + + L+ TV+ + + ++N S + I I G I ++ L Sbjct: 1 MSKKALIGLIFIVLIISTVIASIFLTMPQENKSVPSVSNTIGVITIEGVIGETNILGIPQ 60 Query: 54 -----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 +E+I + D + A++V ++SPGGSA I+ ++++K K VI + + A Sbjct: 61 VTGDPVEQIRKAQEDSTVKAVVVKINSPGGSAAKSVEIYTELKRLKETGKKVIISMGDAA 120 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY+ +C +IIVA ++ GSIGV+ QY + DKLG+ ++KS P K SP Sbjct: 121 ASGGYMAACGGDIIVANPATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDMGSPT 180 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ P+ +++Q V+D +Y FV +VSE R +P DK L+DGRI+TG +A KVGL+D + Sbjct: 181 RDLTPEEKKILQGVIDDTYEQFVEIVSEGRKMPIDKVKELADGRIFTGRQALKVGLVDKL 240 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 G + Q +K + P N + + S+L + +++ + Sbjct: 241 GDFYDAVDIAAKEAGIQGKPVLKYYTTP-NPLSILFGSGAKSNLEGTGLEILRLLFID 297 >gi|198275373|ref|ZP_03207904.1| hypothetical protein BACPLE_01534 [Bacteroides plebeius DSM 17135] gi|198271709|gb|EDY95979.1| hypothetical protein BACPLE_01534 [Bacteroides plebeius DSM 17135] Length = 586 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 12/270 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGG 78 ++ VA G+I++ S+++ + + + +D + A+++ ++SPGG Sbjct: 296 ATPKSKTRDVVAVYYAYGEIDNGSSYDEGINSEKVTKDLRDLRKDKNVKAVVLRVNSPGG 355 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+R + +K KPV+ + + AAS GY ISCA+N IVA T+L GSIG+ Sbjct: 356 SAYGSEQIWREVTLLKAEKPVVVSMGDYAASGGYYISCAANKIVAEPTTLTGSIGIFGMM 415 Query: 139 PYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P L +KLG+ VK+ M S N + +MQ +V+ Y F + +E R Sbjct: 416 PDASELLTNKLGLHFDGVKTHKMADMGSMSRPFNAEESALMQQMVNQGYALFTKRCAEGR 475 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 NIP ++ +++GR+WTG+ AK++ L+D +GG + Q LG + K+K + P K Sbjct: 476 NIPLEELCKIAEGRVWTGSMAKELKLVDELGGLDTAIQLAAELGKVKDY-KLKSY-PAKQ 533 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + +L N + + QG Sbjct: 534 DFLTELLNTRADRYIHGQLQETFGEYYQGF 563 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 107/275 (38%), Gaps = 47/275 (17%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------- 50 +++L + L + S S V + ++G +++ Sbjct: 20 FIFIILGVTMLAGIVASSESETLVMPNSVFTLELKGTVQERYQPSPVDQFFEDQISTYGL 79 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRKPVITEVHEM 106 ++++ I++ ++ + + G+ +AI RA+ K + +M Sbjct: 80 EDILNSIQKAKENEQIKGIYLHT----GALACSTASLQAIHRALTDFKQSGKFLIAYADM 135 Query: 107 AASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 GY ++ ++ ++ VGS+ G+ + ++K FL K+GV ++ + K+ Sbjct: 136 YTQGGYYLASVADKVIVNP---VGSLSWHGLASETMFLKDFLVKIGVKMQIFRVGTYKSA 192 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-------GRIWT 214 P +E++P + Q ++S++ V V+ SRNI D +L+D + Sbjct: 193 VEPMTNTEMSPANREQTQAFLESTWKSIVDDVAASRNISVDSLNLLADKNMDLRPAEDY- 251 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL D + ++EV L +L + Sbjct: 252 ----VHCGLADTLMYKDEVLSYLKSLAGLTEEDDL 282 >gi|89100078|ref|ZP_01172947.1| signal peptide peptidase [Bacillus sp. NRRL B-14911] gi|89085168|gb|EAR64300.1| signal peptide peptidase [Bacillus sp. NRRL B-14911] Length = 358 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 138/269 (51%), Gaps = 19/269 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 +S +A + + G I+D+ + +++++ + DDS A+I+ ++SPG Sbjct: 78 GSSSKKIAVLNVDGTIQDAGDASSLFASPGYNHKSFMKKLDHVKEDDSVKAVILRVNSPG 137 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ +KPV + MAAS GY IS + I A+ +L GS+GV+ Sbjct: 138 GGVVESSEIHDKIVEIQKEAKKPVYISMGSMAASGGYYISAPAEKIYASPETLTGSLGVI 197 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q +K GV ++KS P K SP E+ + +++Q ++D+SY FV+++SE Sbjct: 198 MQGYNYAGLAEKYGVEFVTIKSGPYKDIMSPSREMTEEEREILQSMIDNSYEGFVKVISE 257 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R IP D+ ++DGRI+ G +AK++ LID G E+V L D ++ + + Sbjct: 258 GRGIPADQVRKIADGRIYDGRQAKELNLIDGFGFFEDVVDELEK---DHKLKGAQVVSYS 314 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +N F L ++ ++ D I + K+ Sbjct: 315 ENMGFGSLFSMGARKVMGDDIEMAGMMKL 343 >gi|319789919|ref|YP_004151552.1| signal peptide peptidase SppA, 36K type [Thermovibrio ammonificans HB-1] gi|317114421|gb|ADU96911.1| signal peptide peptidase SppA, 36K type [Thermovibrio ammonificans HB-1] Length = 292 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 145/260 (55%), Gaps = 6/260 (2%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSW-----SSHVEDNSPHVARIAIRGQIEDSQELIERIER 59 +K++K +++L ++ V+ + S P VA + I G I S+ ++ ++R Sbjct: 1 MKRLKGIFLLLGVMAFVVLVMALFPKEMGSIEAAYGPKVAIVRIEGVISRSEPYLKLLDR 60 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + R+ S A+++ + SPGG A + I + +V RKPV+ + +AAS G +S + Sbjct: 61 VERNSSVKAVVLRVDSPGGVVGACQEIHDKVAEVARRKPVVVSMDSVAASGGLYVSVPAT 120 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA ++ GSIGV+ Q V KLG+ +VKS K +PF + +P+ ++++Q Sbjct: 121 KIVANPGTITGSIGVIIQVLNVSQLAQKLGIEAVTVKSGRCKDLLNPFKKPDPECLKVVQ 180 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +++D SY+ FV V++ R++P +K +DGRI+TG AK++GL+D +GG E+ + Sbjct: 181 NLIDDSYNQFVEAVAKGRHLPVEKVRSFADGRIFTGRRAKELGLVDYLGGIEKAVEVAKK 240 Query: 240 LGVDQSIRKIKDWNPPKNYW 259 LG K+ + P + +W Sbjct: 241 LGRCPG-AKVVEVKPKRGFW 259 >gi|260891981|ref|YP_003238078.1| signal peptide peptidase SppA, 36K type [Ammonifex degensii KC4] gi|260864122|gb|ACX51228.1| signal peptide peptidase SppA, 36K type [Ammonifex degensii KC4] Length = 296 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 16/275 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIE 58 + LSLV V S V + I + G I D + +IE + Sbjct: 13 VIFLSLVLAAVWGRSRERGVGLGEGKIGLIYLTGVIAGEGGASPLFGSTADVRGVIEALG 72 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCA 117 R D S A+++ + SPGGSA A + I A+++V K K V+ + + AAS Y ++ Sbjct: 73 RAEEDPSIKAVVLRIDSPGGSAAASQEISDAVRRVQKAGKKVVVSMGDTAASGAYWVAAG 132 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ IVA +++ GSIGV+F+ + KLG+ + +KS P K S + P+ + Sbjct: 133 ADKIVALPSTITGSIGVIFETANLSGLYHKLGIQKEILKSGPFKDMGSESRPLTPEERAI 192 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q +VD Y FV V++ R++P K L L+DGR++TG +AK++GL+D +G Q Sbjct: 193 LQGMVDDIYQQFVDHVAQGRHLPRQKVLELADGRVFTGRQAKELGLVDELGDLHTAVQEA 252 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 L + ++ + K WF + SLL Sbjct: 253 AHLAGIKGKPEVVELG--KAAWFRRFFGGFLDSLL 285 >gi|114328685|ref|YP_745842.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] gi|114316859|gb|ABI62919.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] Length = 347 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 91/268 (33%), Positives = 152/268 (56%), Gaps = 6/268 (2%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 SH + PH+ RI I G I + L+E I + D S A+++ ++SPGG+ GEA+ Sbjct: 81 SHAVVSGPHLTRIRISGIITYDRPLLEAISHAADDSSVKAVLLEINSPGGTVAGGEALHD 140 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A+ ++ RKP++T + +AASAGY+I+ S I A + +L GSIGVL Q + L KL Sbjct: 141 ALAQLAARKPLVTTMESVAASAGYMIAAPSARIFARQATLTGSIGVLMQSAELSGLLGKL 200 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV ++ S PMK +PS + ++P+ QM+Q +V+ Y FV +V++ R++ + L+ Sbjct: 201 GVGSNTIVSGPMKDQPSLTAPLSPEGRQMLQGIVNDMYDQFVTMVAQGRHMTPEHVRALA 260 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA---LGVDQSIRKIKDWNPPKNYWFCDLKN 265 DGR +TG +A +GL+D +GG+ + L + D +R + + + + +WF Sbjct: 261 DGRPYTGRQALALGLVDQIGGEHDARVWLAKERHVPEDLPVRPLHESDGLRKHWFGGWLG 320 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWNP 293 S+ + +E L + + G WA+W P Sbjct: 321 -SLENFVESK--LSQGVSIDGAWALWQP 345 >gi|260460501|ref|ZP_05808752.1| signal peptide peptidase SppA, 36K type [Mesorhizobium opportunistum WSM2075] gi|259033606|gb|EEW34866.1| signal peptide peptidase SppA, 36K type [Mesorhizobium opportunistum WSM2075] Length = 318 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 107/299 (35%), Positives = 167/299 (55%), Gaps = 14/299 (4%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQIEDSQELIERIERISRDD 64 R +V L V+ S + +D H+A++ I G I + ELI+R+E I + Sbjct: 20 FWRVAAFGIVALGVIALSAWLYGDDFGGATVDHIAKVRIEGTITEDDELIKRLETIRQSS 79 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 +I+++ SPGG+ GE+I+ ++K+ KPV+ EV +AASAGY+I+ A++ IVA Sbjct: 80 KVKGVILAIDSPGGTTVGGESIYEEVRKLAADKPVVAEVGTLAASAGYMIASAADHIVAR 139 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +TS+VGSIGVL QYP V +DKLGV ++ VKSSP+KA PSPF N M++ ++ Sbjct: 140 KTSIVGSIGVLIQYPDVSGMMDKLGVKLEEVKSSPLKASPSPFKPTNDDERAMVRKLILD 199 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 SY WFV +V+E R + +++ L L+DG I+TG + GLID VGG+ L GVD Sbjct: 200 SYDWFVGIVAERRKMSHEQALALADGSIFTGRQGVANGLIDAVGGETVAIDWLATKGVDA 259 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP----------LMKQTKVQGLWAVWNP 293 ++ ++ + F K++ + +P + + GL +VW+P Sbjct: 260 KLKVVEWKETERRGGFLWSKSMVKTIGSALGLPDSGGDIIHELGADRLFLDGLVSVWHP 318 >gi|225849949|ref|YP_002730183.1| signal peptide peptidase SppA, 36K type [Persephonella marina EX-H1] gi|225644848|gb|ACO03034.1| signal peptide peptidase SppA, 36K type [Persephonella marina EX-H1] Length = 275 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 144/267 (53%), Gaps = 5/267 (1%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 KKI V+ ++ + +FS+ + +P +A I I G I D I+ IE DDS Sbjct: 3 KKIAIGVVLFLIIIYLISFFSYRA-----TPKIAIIEIHGVISDFYSHIQNIESAESDDS 57 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++S+ SPGG+ A + I+RAI++++ +KPV+ + +AAS GY IS +++I A Sbjct: 58 IKAVVISVDSPGGTVGAAQEIYRAIERLRTKKPVVVSMGNVAASGGYYISAPASVIYANP 117 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGV+ Q+ + LDKLG+ ++++KS K P ++P+ ++++D + Sbjct: 118 GTITGSIGVIIQHMDLSRVLDKLGIKVENIKSGKNKDILYPNKSLSPEQKKLIEDTIKDV 177 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ + R I D+ +DGRI++G +AKK+ L+D +G ++ L + Sbjct: 178 YDQFLEAIVRYRPITKDQLRPYADGRIFSGRQAKKIKLVDKLGNIQDAVNEARKLAGLED 237 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLL 272 + + L N ++S++ Sbjct: 238 RHVVIIKLGKRKNILEKLLNSDMNSII 264 >gi|15887687|ref|NP_353368.1| proteinase IV [Agrobacterium tumefaciens str. C58] gi|15155244|gb|AAK86153.1| proteinase IV [Agrobacterium tumefaciens str. C58] Length = 317 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 119/292 (40%), Positives = 180/292 (61%), Gaps = 9/292 (3%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 ++L + + F W + PH+ARI + G I D+ EL+ER+++I++ D+ L Sbjct: 22 AAVLLLVVGAFGLYRFFWQGPQQSAKPHIARIEVSGLITDNTELLERLDKIAKSDNVKGL 81 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 IVS+SSPGG+ Y GE IF+ I+ V +KPV+++V +AASAGY+I+ A ++IVA ETS+ Sbjct: 82 IVSISSPGGTTYGGERIFKVIRSVAEKKPVVSDVRTLAASAGYMIASAGDVIVAGETSIT 141 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+FQYP + ++KLGVS++ +KSSPMKAEPSPF E +A M++ +V SY WF Sbjct: 142 GSIGVIFQYPQLGQLMEKLGVSLQEIKSSPMKAEPSPFHEAPEEAKTMIRAMVMDSYGWF 201 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V LV++ R +P ++ L L+DG I+TG +A L+D +GG++EV GV + + + Sbjct: 202 VDLVADRRKLPREEVLKLADGSIFTGRQALANKLVDTLGGEKEVRAYFETRGVAKDLPIV 261 Query: 250 KDWNPPKNYWFCDLKNLSISSLL--EDTIPL-------MKQTKVQGLWAVWN 292 + P N F I+ LL +D IP + + GL +VW Sbjct: 262 EWRAPSSNSPFALFSVAQIAKLLGYDDLIPFAGPSQLGADKLFLDGLVSVWQ 313 >gi|166368609|ref|YP_001660882.1| protease IV [Microcystis aeruginosa NIES-843] gi|166090982|dbj|BAG05690.1| protease IV [Microcystis aeruginosa NIES-843] Length = 604 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 15/284 (5%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATA 68 ++L S D+S +A + G I + Q +L + + ++ + A Sbjct: 298 ISLANYASSLDDEGGDSSDQIAIVYAEGTIVEGQGDRGEIGGDKLAKELRKLQGKEEVKA 357 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ ++SPGGSA A E I R I+++ +KPVI + ++AAS GY I+ I A ++ Sbjct: 358 VVLRINSPGGSATASEVILREIKRLDAKKPVIISLGDVAASGGYWIAMGGQRIFADNDTI 417 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV ++ + G+ +VK+ + + NP+ +++ Q V+ Y Sbjct: 418 TGSIGVFGLLLNIQKIANNNGIDWDTVKTGQLADISTITRPKNPQELEIYQAAVNRFYDL 477 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F+ V++ R + DK ++ GR+WTG +A K+GL+D +GG E Q Sbjct: 478 FIETVAKGRKLSPDKVRTVAQGRVWTGKDAVKIGLVDQIGGLEAAVQYAAKTAKLGDDWS 537 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +K++ P W +L +S+LL+ +P + + L W Sbjct: 538 LKEY-PRSQSWQEEL----LSNLLQTYLPPLTKNN-HPLTQEWQ 575 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 14/228 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE-----AIFRAIQKVKNR-KPVITEVH 104 +++I IE+ + DDS L++ G+ + +A+ K + K +I Sbjct: 84 RQVIAAIEKAALDDSIVGLLLY---GRGTVGEYGYATLTEVRQALAKFRQSGKKIIAYDV 140 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E Y ++ + ++ + G+ Q + L+K GV ++ VK K Sbjct: 141 EWTEKE-YYLASVAEKVIINPVGRMEINGLSSQQTFFADALEKYGVGVQVVKVGSFKGAV 199 Query: 165 SPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKV 221 P++ +++ + Q +Q ++D+ + + V++SRN+ + +SD + I AKK Sbjct: 200 EPYTRQDLSVQNRQQLQTLLDTIWSNYSATVAKSRNLTPQQVQTISDTQGILEATTAKKA 259 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 G +D V + V L + K ++ L N + S Sbjct: 260 GFVDEVAYLDRVIALAKDLTGEAK-NKTNQEETSGSFSQISLANYASS 306 >gi|291280462|ref|YP_003497297.1| signal peptide peptidase SppA [Deferribacter desulfuricans SSM1] gi|290755164|dbj|BAI81541.1| signal peptide peptidase SppA [Deferribacter desulfuricans SSM1] Length = 285 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 77/253 (30%), Positives = 139/253 (54%), Gaps = 5/253 (1%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 V+K + + V++ + V FS + + N PH+ I + G I DS++++ + + + Sbjct: 7 VMKFLLSLIVIVIFIYFVVYLFSGKNEIVLNKPHIKVIKLEGIIVDSEKIVRELRKAEEN 66 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D +I+ ++SPGG+ + I++AI+KVK KPV + + AS GY ++ A + I Sbjct: 67 DFVKGVIIRINSPGGAVAPSQEIYKAIRKVK--KPVYAAISTLGASGGYYVAAACDKIYV 124 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S+ GSIGV+ ++ K DK+GV +S+KS K S E++ + +++Q +D Sbjct: 125 LGGSITGSIGVIMRFSNFKELYDKIGVKFESIKSGKFKDIGSSSREMSKEERELLQKAID 184 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA---L 240 + Y FV + ++R+I D +DGRI TG +A K+G +D +G + ++ + L Sbjct: 185 NVYKQFVNDILKTRHISKDIIKKYADGRILTGEQALKLGFVDKIGTYYDAFEDMKKDFHL 244 Query: 241 GVDQSIRKIKDWN 253 G D + ++KD N Sbjct: 245 GEDVVLYEVKDKN 257 >gi|15964138|ref|NP_384491.1| putative protease IV transmembrane protein [Sinorhizobium meliloti 1021] gi|307301283|ref|ZP_07581045.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti BL225C] gi|307317954|ref|ZP_07597391.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti AK83] gi|15073314|emb|CAC41822.1| Putative protease IV transmembrane protein [Sinorhizobium meliloti 1021] gi|306896356|gb|EFN27105.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti AK83] gi|306903739|gb|EFN34326.1| signal peptide peptidase SppA, 36K type [Sinorhizobium meliloti BL225C] Length = 319 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 130/302 (43%), Positives = 191/302 (63%), Gaps = 16/302 (5%) Query: 6 KKIKTRYVMLS-LVTLTVVYFSWSSH---VEDNSPHVARIAIRGQIEDSQELIERIERIS 61 K R+ ++ LV + F++S E HVAR+A+ G I+D +EL+ER+ERI+ Sbjct: 15 KLSFWRWAAVAVLVAGGLALFAFSGWGDVTERARDHVARVAVTGLIQDDRELVERLERIA 74 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + S ALIV++SSPGG+ Y GE I++AI+KV +KPV+++V +AASAGYLI+ A + I Sbjct: 75 DNQSVKALIVTISSPGGTTYGGEVIYKAIRKVAEKKPVVSDVRTLAASAGYLIALAGDRI 134 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ETS+ GSIGV+FQYP VK +DKLGVS++S+KS P+KAEPSPF + +A M+Q + Sbjct: 135 VAGETSITGSIGVIFQYPQVKTLMDKLGVSLESIKSRPLKAEPSPFHPPSDEARAMIQAM 194 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D SY WFV LV+E R +P + L L+DGRI+TG +A + L+D +GG +E+ L Sbjct: 195 IDDSYGWFVDLVAERRKLPRPEALALADGRIFTGRQALEGKLVDELGGDDEIRAFLAERK 254 Query: 242 VDQSIRKIKDWNPPK---NYWFCDLKNLSISSLLEDTIPLMKQTK--------VQGLWAV 290 V + + + DW P ++ L S+ +L + P MK + + GL +V Sbjct: 255 VSKDL-PVLDWEAPSGTLSFGLGSLLAESVKALGYEAFPTMKSLEKTGLDKLFLDGLVSV 313 Query: 291 WN 292 W Sbjct: 314 WQ 315 >gi|261418196|ref|YP_003251878.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC61] gi|319767844|ref|YP_004133345.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC52] gi|261374653|gb|ACX77396.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC61] gi|317112710|gb|ADU95202.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y412MC52] Length = 335 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 18/274 (6%) Query: 36 PHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +A + + G I+D+ Q ++ I++ D A+I+ ++SPGG Sbjct: 60 KKIAVLEVNGVIQDAGEAESFLSSSQYNHQTFLQMIKQAKEDQDVKAIILRINSPGGGVA 119 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I+ + K+K + KP+ + MAAS GY I+ A + I A+ ++ GSIGV+ Q Sbjct: 120 ESAEIYDQLMKLKKKTNKPIYVSMGAMAASGGYYIAAAGDKIFASPETITGSIGVIMQSV 179 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + K GV + ++KS P K +P ++ +++Q +++ SY FV +V++ R + Sbjct: 180 NYEGLAKKYGVELVTIKSGPYKDIMNPARKMTEAEREILQRLINDSYDAFVDVVAKGRKL 239 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKN 257 P D L+DGRI+ G +AK++ L+D G ++ +L + +K N P + Sbjct: 240 PEDTVRKLADGRIYDGRQAKELRLVDEFGYLDDAIAALKKEHHLTGAQVVKYVNDAPWSS 299 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + + S I L+ + L ++ Sbjct: 300 LFEMVSNRMKPDSEAAGLIRLLSRPSSPRLMYLY 333 >gi|222055988|ref|YP_002538350.1| signal peptide peptidase SppA, 36K type [Geobacter sp. FRC-32] gi|221565277|gb|ACM21249.1| signal peptide peptidase SppA, 36K type [Geobacter sp. FRC-32] Length = 298 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 146/276 (52%), Gaps = 11/276 (3%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDN----------SPHVARIAIRGQIEDSQELIERIE 58 K ++L +V +TV++ ++ V + V + ++G I D QE +++++ Sbjct: 4 KWLIIVLIVVAVTVLFSVFTISVMKSVFSDTEEAIHGEGVGLVEVKGIILDPQETVKQLQ 63 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + +++ A+++ + SPGG + I A++K+ +K V+ + +AAS GY I+ + Sbjct: 64 ALRKNEKVKAVVLRIDSPGGVVGPSQEIHDAVKKLNMKKKVVVSMGSLAASGGYYIAVPA 123 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 I A ++ GSIGVL ++ ++ +DK+G+ ++K+ K SP + + +M+ Sbjct: 124 TKIFANPGTITGSIGVLMKFSNIEGLMDKVGMKAFTLKTGKFKDVGSPARTMTDQEKEML 183 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q V+DS++ F++ V+E R +P ++ L++GRI++G +A + LID +G ++ + Sbjct: 184 QSVIDSTHGQFIKAVAEGRKLPVEEVRSLANGRIYSGEQALALKLIDQLGTLQDAVEEAG 243 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 LG + +I P K F DL S + + Sbjct: 244 RLGGIKGEPEIIR-PPKKKKVFIDLLVESAAERISS 278 >gi|330997115|ref|ZP_08320968.1| signal peptide peptidase SppA [Paraprevotella xylaniphila YIT 11841] gi|329570910|gb|EGG52617.1| signal peptide peptidase SppA [Paraprevotella xylaniphila YIT 11841] Length = 587 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 14/277 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-----------SQELIERIERISRDDSATALIVSLS 74 + + +A G I D ++ + + + D+S A+++ ++ Sbjct: 292 AATETTPKKGDKIAVYYAYGDIVDRKTEWSENVIDAETVCHDLRTLREDESVKAVVLRIN 351 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSAYA E I+ ++ ++ KPV+ + MAAS GY ISCA+N IVA T+L GSIG+ Sbjct: 352 SGGGSAYASEQIWHEVKLLRKAKPVVVSMGGMAASGGYYISCAANYIVAEPTTLTGSIGI 411 Query: 135 LFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 P L DKLG+ VK++ +P NP QMMQ + Y F V Sbjct: 412 FGLIPDASQLLSDKLGLHFDVVKTNAHADFGTPARPFNPSEAQMMQGYIQRGYKLFTERV 471 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +E RN+ + L++GR+WTG +A + GL D G + + +L + ++ Sbjct: 472 AEGRNMETSQVEKLAEGRVWTGQQAVENGLADANGNLQTAIKKAASLAKIKDYH--TEYA 529 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 P W+ L + L + T L + Sbjct: 530 PTPAPWYEGLFDQQKKDYLNTALQETLGTYYAPLMNL 566 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 95/259 (36%), Gaps = 39/259 (15%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHV-----ARIAIRGQIEDS------------------- 50 ++L TL ++ + +E +P + R+ + G++++ Sbjct: 20 IALFTLGILSIAGMMTMESTAPSIKPQSVLRLTLNGELQEDAPNDPLGDLFGSTYPTLSL 79 Query: 51 QELIERIERISRDDSATAL------IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 +E+ I+ + + + ++ G + I ++ K I Sbjct: 80 REIQTAIQGAKENPNIDGIYIEAQTLL-----GATPAMIRDIRESLADFKKSGKYIIAYG 134 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + Y I ++ I+ V G+ Q + K L+K+G+ ++ K K+ Sbjct: 135 DNYTQGAYYICSIADSIILNPQGQVNWCGMASQPIFYKDLLEKIGIKMQVFKVGSYKSAV 194 Query: 165 SPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKK 220 PF+ ++ + + ++ + + VS SR+I D +D + E + Sbjct: 195 EPFTATQMSDANREQVTSYLNDIWQTMLTDVSRSRSIKKDLLDEYADSMLTFRPAEELVR 254 Query: 221 VGLIDVVGGQEEVWQSLYA 239 G++D + + + + L A Sbjct: 255 NGMVDSLCYIDGISRMLRA 273 >gi|311745841|ref|ZP_07719626.1| signal peptide peptidase SppA, 67K type [Algoriphagus sp. PR1] gi|126576044|gb|EAZ80322.1| signal peptide peptidase SppA, 67K type [Algoriphagus sp. PR1] Length = 588 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 127/242 (52%), Gaps = 10/242 (4%) Query: 33 DNSPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +S +A I G+I D S + + I + +DD+ A+++ ++SPGGS A E Sbjct: 303 TSSNRIAVILAEGEIVDGSVEGAISSDKFAKEIRKARKDDNIKAIVLRVNSPGGSVLASE 362 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+R + + K KP+ + E+AAS GY IS ++ IVA ++ GSIG+ + + Sbjct: 363 VIWREMTEAKKAKPLYVSMGEVAASGGYYISAPADTIVAQPNTITGSIGIFGIWFNAQEL 422 Query: 145 L-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L +KLG++ V++ + +P E+ +++Q V+ Y F+ VSE R + + Sbjct: 423 LNEKLGITSDVVETGQLSDFMNPTRELTDIERKIVQTNVEKGYETFISRVSEGRGMSAEA 482 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+WTG +AK+ GL+DV+G ++ L A +D S + P + WF + Sbjct: 483 VKEVASGRVWTGNQAKERGLVDVLGSLDDTI-ELAAERIDASSDYRVIYYPQQKPWFETI 541 Query: 264 KN 265 N Sbjct: 542 MN 543 Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 99/271 (36%), Gaps = 38/271 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRG-QIEDSQ-------------------- 51 +++S + ++ S S V + + + G I + Sbjct: 22 ILVSFGIIGMIAASGSEEVTVKENTILHLNLNGRTIVERTADDDLDLSIFGSGFGGPMTA 81 Query: 52 ---ELIERIERISRDDSATALIVSLSSPGGSAYAGE----AIFRAIQKVKNRKPVITEVH 104 L + I+ DD+ + L++ G AG+ I ++ K+ I Sbjct: 82 GLVNLKKAIQAAKEDDNIQGI--YLNT--GLVNAGQANLLEIREFLEDFKSSGKFILAYD 137 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E+ GY ++ ++ I + G ++K DK+GV + + K+ Sbjct: 138 EIFTEGGYYLASVADEIYLNPMGGIDFNGFSSNTLFLKGLFDKVGVKPEVFRVGEFKSAV 197 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKV 221 PF ++++P+ + + + ++ ++ESR++ D ++ + +A Sbjct: 198 EPFILTQMSPENRLQTEAFLSDMNDFALKNIAESRDVNLDSLTKTNNMMLVREPEDAVTY 257 Query: 222 GLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 L+ + ++E+ + LG D I I Sbjct: 258 KLVTGLAYEDEIHSKLREKLGLGEDDDISTI 288 >gi|221633251|ref|YP_002522476.1| protease IV, signal peptide peptidase [Thermomicrobium roseum DSM 5159] gi|221155784|gb|ACM04911.1| protease IV, signal peptide peptidase [Thermomicrobium roseum DSM 5159] Length = 321 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 14/259 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERIS 61 L+L + S PHVA I +RG I ++ ++E++ER Sbjct: 25 LALTAGLGMLASGRLDRWLEQPHVAEIRVRGPIALRGGAGLLTGESASAERIVEQLERAR 84 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 ++ +A +++ + SPGG A I+ A+++V+ KPV+ + AAS GY IS ++ Sbjct: 85 QNPNARVVLLRVDSPGGGVNAAREIWAAVRRVQESGKPVVAFFEDTAASGGYYISAPADR 144 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA ++ GSIGV+ P + +KLG+ ++ VKS K S + P+ +++ Sbjct: 145 IVAMPDTITGSIGVILIIPDLSGLYEKLGIRMQVVKSGTFKDMASSDRPLTPEERALLEQ 204 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V +Y FVR+V+E R +P ++ L+DGRI+TG +AK++GL+D +GG + L Sbjct: 205 LVHEAYDEFVRVVAEGRAMPPERVRELADGRIYTGRQAKELGLVDELGGYRDALAVAGQL 264 Query: 241 GVDQSIRKIKDWNPPKNYW 259 + ++ + P +W Sbjct: 265 AGLGAEPAVRVYRPQPTFW 283 >gi|288817557|ref|YP_003431904.1| signal peptide peptidase [Hydrogenobacter thermophilus TK-6] gi|288786956|dbj|BAI68703.1| signal peptide peptidase [Hydrogenobacter thermophilus TK-6] gi|308751159|gb|ADO44642.1| signal peptide peptidase SppA, 36K type [Hydrogenobacter thermophilus TK-6] Length = 278 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 76/272 (27%), Positives = 144/272 (52%), Gaps = 5/272 (1%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 R++++ ++ ++V+ +A + + G I D++ +I++IE+ +DDS AL+ Sbjct: 3 RFILVLILLVSVMVIGSLLSRIPVGNRIAVLKVEGIIIDAEPVIKKIEKAKKDDSIKALV 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + + SPGGS A + I+RA+++ K ++KP++ + +AAS GY IS ++ I A ++ Sbjct: 63 LRVDSPGGSVGASQEIYRALERFKDSKKPLVVSMGNVAASGGYYISVPADYIYANPGTIT 122 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ ++ + L +LGV ++K+ K SPF E+ + + ++ +D +Y F Sbjct: 123 GSIGVIIEHIDYRELLSRLGVKATAIKTGKFKDTLSPFRELTDEEREYLKKTIDDAYGQF 182 Query: 190 VRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + + + R I D+ ++DGRI TG A+KVGL+D +G E+ L + R Sbjct: 183 LSSILKYRSKKISEDELRSIADGRIMTGLMAQKVGLVDGLGNIEDAIDKAKELAGVKEAR 242 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 + + + L + S + P M Sbjct: 243 VF--YMEERKSFLRRLLGAKLPSFDLNYYPTM 272 >gi|150395248|ref|YP_001325715.1| signal peptide peptidase SppA, 36K type [Sinorhizobium medicae WSM419] gi|150026763|gb|ABR58880.1| signal peptide peptidase SppA, 36K type [Sinorhizobium medicae WSM419] Length = 319 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 124/291 (42%), Positives = 184/291 (63%), Gaps = 12/291 (4%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 V+ + + W E HVAR+A+ G I+D +EL+ER+ERI+ + S ALIV+ Sbjct: 26 VLFAGGLALFAFSGWGDVTERARDHVARVAVTGLIQDDRELVERLERIAENQSVKALIVT 85 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SSPGG+ Y GE I++A++KV +KPV+++V +AASAGYLI+ A + IVA ETS+ GSI Sbjct: 86 ISSPGGTTYGGEVIYKAVRKVAAKKPVVSDVRTLAASAGYLIALAGDRIVAGETSITGSI 145 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+FQYP VK +DKLGVS++S+KS P+KAEPSPF + +A M+Q ++D SY WFV L Sbjct: 146 GVIFQYPQVKTLMDKLGVSLESIKSRPLKAEPSPFHPPSDEARAMIQAMIDDSYGWFVDL 205 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R +P + L L+DGRI+TG +A + L+D +GG +E+ L V + + + DW Sbjct: 206 VAERRKLPRAEALGLADGRIFTGRQALEGKLVDELGGDDEIRAFLAERKVSKDL-PVLDW 264 Query: 253 NPPK---NYWFCDLKNLSISSLLEDTIPLMKQTK--------VQGLWAVWN 292 P ++ L ++ +L + P MK + + GL +VW Sbjct: 265 EAPSSTLSFGLGSLLAEAVKALGYEAFPAMKGLEKTGLDKLFLDGLLSVWQ 315 >gi|95929491|ref|ZP_01312234.1| signal peptide peptidase SppA, 36K type [Desulfuromonas acetoxidans DSM 684] gi|95134607|gb|EAT16263.1| signal peptide peptidase SppA, 36K type [Desulfuromonas acetoxidans DSM 684] Length = 298 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 4/274 (1%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG 77 + L + S S V I + G I DS+ +++++ ++ + A+++ + SPG Sbjct: 23 IILIMSSSRGSGQKFALSDKVGVIEVLGTITDSKAIVDQLIDFGQNHAVKAIVLRVDSPG 82 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + I+ + ++ KPV+ + +AAS GY IS +N I A ++ GSIGV+ + Sbjct: 83 GGVGPSQEIYDEVVRLTALKPVVVSMGSVAASGGYYISAPANRIFANSGTITGSIGVIME 142 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + V +DK+G+ +KS K S + + ++Q ++D + FV VSE R Sbjct: 143 FTNVIALMDKVGLKTNVIKSGDHKDIGSSVRAMTDQEKALLQSLIDDVHDQFVTAVSEGR 202 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ D+ L+DGRI+TG +A++ GL+D +GG + L + + PK Sbjct: 203 HLEKDQVFKLADGRIFTGRQAQQQGLVDDLGGLQAAIHYAGELAGIEGTPDVLYPAEPKP 262 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 DL + IS + ++ +T QGL +W Sbjct: 263 ----DLIDYFISRTASEIERVILKTDTQGLQLLW 292 >gi|239831003|ref|ZP_04679332.1| signal peptide peptidase SppA, 36K type [Ochrobactrum intermedium LMG 3301] gi|239823270|gb|EEQ94838.1| signal peptide peptidase SppA, 36K type [Ochrobactrum intermedium LMG 3301] Length = 323 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 187/292 (64%), Gaps = 13/292 (4%) Query: 13 VMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 +L + L + SWS + + PH+A++ I G I +++EL++R+++I+RDD+ +I+ Sbjct: 25 FLLLIAALIAGFASWSMRGTNFSQPHIAKVRIEGTIFENEELLKRLDKIARDDAVKGVIL 84 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 L SPGG+ GEAIF A++K+ +KPV+T+V +AASAGY+I+ AS+ I+A +TS+VGS Sbjct: 85 VLDSPGGTTVGGEAIFEAVRKIAAKKPVVTQVGTLAASAGYMIASASDHIIARQTSIVGS 144 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGVLFQYP + LD +GV ++++KSSP+KAEP+ FS + +A M+ +++ SY WFV Sbjct: 145 IGVLFQYPDLSKLLDTIGVKVETIKSSPLKAEPNYFSPASDEAKGMISNMIMDSYAWFVD 204 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 +V + R+ +++ L L++G ++TG +A LID +GG+EE L G+ + + ++ + Sbjct: 205 IVEKRRSFTHEQALALANGAVFTGRQALDKKLIDGLGGEEEAVAWLAGKGLSKDLPRL-E 263 Query: 252 WNPPKNYWFCDLKNLSISSLL------EDTIPLMKQTK-----VQGLWAVWN 292 W P + L++L I + ++ ++KQ + GL +VW+ Sbjct: 264 WKPVNDDTGFSLRDLIIHAGARLIGVPQEADGVLKQIAKERIFLDGLLSVWH 315 >gi|56421326|ref|YP_148644.1| protease [Geobacillus kaustophilus HTA426] gi|56381168|dbj|BAD77076.1| protease IV (signal peptide peptidase) [Geobacillus kaustophilus HTA426] Length = 335 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 18/274 (6%) Query: 36 PHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +A + + G I+D+ Q ++ I++ D A+I+ ++SPGG Sbjct: 60 KKIAVLEVNGVIQDAGEAESLLSSSQYNHQTFLQMIKQAKEDQDVKAIILRINSPGGGVA 119 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I+ + K+K + KP+ + MAAS GY I+ A + I A+ ++ GSIGV+ Q Sbjct: 120 ESAEIYDQLMKLKKKTNKPIYVSMGAMAASGGYYIAAAGDKIFASPETITGSIGVIMQSV 179 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + K GV + ++KS P K +P ++ +++Q +++ SY FV +V++ R + Sbjct: 180 NYEGLAKKYGVELVTIKSGPYKDIMNPARKMTEAERKILQRLINDSYDAFVDVVAKGRKL 239 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKN 257 P D L+DGRI+ G +AK + L+D G ++ +L + +K N P + Sbjct: 240 PEDTVRKLADGRIYDGRQAKALRLVDEFGYLDDAIAALKKEHHLTGAQVVKYVNDAPWSS 299 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + + S I L+ + L ++ Sbjct: 300 LFEMVSNRMKPDSEAAGLIRLLSRPSSPRLMYLY 333 >gi|332876682|ref|ZP_08444441.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685387|gb|EGJ58225.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 587 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 14/277 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-----------SQELIERIERISRDDSATALIVSLS 74 + + +A G I D ++ + + + D+S A+++ ++ Sbjct: 292 AATEATPKKGDKIAVYYAYGDIVDRKTEWSENVIDAETVCRDLRTLREDESVKAVVLRVN 351 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSAYA E I+ ++ ++ KPV+ + MAAS GY ISCA+N IVA T+L GSIG+ Sbjct: 352 SGGGSAYASEQIWHEVKLLREAKPVVVSMGGMAASGGYYISCAANYIVAEPTTLTGSIGI 411 Query: 135 LFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 P L DKLG+ VK++ +P NP QMMQ + Y F V Sbjct: 412 FGLIPDASQLLSDKLGLHFDVVKTNAHADFGTPARPFNPSEAQMMQGYIQRGYKLFTERV 471 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++ RN+ + L++GR+WTG +A + GL D G + + +L + ++ Sbjct: 472 ADGRNMKTGQVKKLAEGRVWTGRQAVENGLADTNGNLQTAIKKAASLAKIKDYH--TEYA 529 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 P + W+ L + L + T L + Sbjct: 530 PTPSPWYEGLFDQQKKDYLNTALQETLGTYYAPLMNL 566 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 93/257 (36%), Gaps = 34/257 (13%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 + +L ++++ + S+ V R+ + G++++ +E Sbjct: 22 FFILGILSIVGMMTVESAAPSIKPQSVLRLTLNGELQEDAPNDPLGDLFGSTYPTLSLRE 81 Query: 53 LIERIERISRDDSATAL------IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + I+ + + + ++ G + I ++ K I + Sbjct: 82 IQTAIQGAKENPNIDGIYIEAQTLL-----GATPAMIRDIRESLADFKKSGKYIIAYGDN 136 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y I ++ I+ V G+ Q + K L+K+G+ ++ K K+ P Sbjct: 137 YTQGAYYICSIADSIILNPQGQVNWCGMASQPIFYKDLLEKIGIKMQVFKVGSYKSAVEP 196 Query: 167 FSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVG 222 F+ ++ + + ++ + + VS SR+I D +D + E + G Sbjct: 197 FTATQMSDANREQVTSYLNDIWQTMLTDVSRSRSIKKDLLNEYADSMLTFRPAEELVRNG 256 Query: 223 LIDVVGGQEEVWQSLYA 239 ++D + + V + L A Sbjct: 257 MVDSLCYIDGVSRMLRA 273 >gi|332296593|ref|YP_004438516.1| signal peptide peptidase SppA, 36K type [Thermodesulfobium narugense DSM 14796] gi|332179696|gb|AEE15385.1| signal peptide peptidase SppA, 36K type [Thermodesulfobium narugense DSM 14796] Length = 289 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 7/275 (2%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERIS 61 +LK++ + L ++T+ ++ + V I I G I D S+ + I R Sbjct: 1 MLKRLSLALIFLLILTIVFSLGYMAAKFKPAGAKVGYIEINGTINDQTSESVSSAIRRAK 60 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASN 119 +D + +++ ++SPGGS A + IF + K KP+I + ++AAS GY +S A + Sbjct: 61 QDPNIRGILLRVNSPGGSVGASQEIFETLMNYKESTGKPIIVSMGDVAASGGYYVSLAGD 120 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A ++L GSIGV+ + + +G+ +++K+ K S F + PK + + Sbjct: 121 KIFALPSTLTGSIGVIANILDIHELMKNIGIKEETLKTGEYKDTGSMFRSLTPKDKEYLM 180 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ SY F+ VS RNIP DK ++DGR+++GA+AK +GLID +G + + Sbjct: 181 GLIGDSYGQFLYDVSTRRNIPLDKLKSIADGRVFSGAKAKSLGLIDELGTLNDTIDYMKN 240 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 L ++KI +L N S + +E Sbjct: 241 L---LGVKKITLEKLNSKNILEELMNTSSKTDVEQ 272 >gi|159026476|emb|CAO86448.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 603 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 15/278 (5%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLS 74 Y S D++ +A + G I + Q +L + + ++ + A+++ ++ Sbjct: 303 YASSLDEGGDSNNQIAIVYAEGTIVEGQGDRGEIGGDKLAKELRKLQGKEEVKAVVLRIN 362 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA A E I R I+++ KPVI + ++AAS GY I+ I A ++ GSIGV Sbjct: 363 SPGGSATASEVILREIKRLDATKPVIISMGDVAASGGYWIAMGGQRIFADNDTITGSIGV 422 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 ++ + G+ +VK+ + + NP+ +++ Q V+ Y F+ V+ Sbjct: 423 FGLLLNIQKIANNNGIDWDTVKTGQLADISTITRPKNPQELEIYQAAVNRFYDLFIETVA 482 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + DK ++ GR+WTG +A K+GL+D +GG E Q ++++ P Sbjct: 483 RGRKLSPDKVRTVAQGRVWTGKDAVKIGLVDQIGGLEVAVQYAAKTAELGDDWSLQEY-P 541 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 W +L +S+ L+ +P + + L W Sbjct: 542 RSQSWQEEL----LSNFLQTYLPPLTKNN-HPLTQEWQ 574 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 111/264 (42%), Gaps = 22/264 (8%) Query: 21 TVVYFSWSSHVEDNSPHVARIA-IRG---QIEDSQELIERIERISRDDSATALIVSLSSP 76 +V+ F+ ++++ D P + + G + +++I IE+ + DD+ L++ Sbjct: 50 SVLVFNLATNISDAPPSSSLADSLTGESRTTLNLRQVIAAIEKAALDDNIVGLLLY---- 105 Query: 77 G----GSAYAGE---AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 G G Y + +A+ K + K +I E Y ++ + ++ Sbjct: 106 GRDNIGE-YGYATLTEVRQALAKFRQSGKKIIAYDMEWTEKE-YYLASVAETVIINPVGR 163 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSY 186 + G+ Q + L+K GV ++ VK K P++ +++ + Q +Q ++D+ + Sbjct: 164 MEINGLSSQQTFFADALEKYGVGVQVVKVGSFKGAVEPYTRQDLSVQNRQQLQTLLDTIW 223 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + V++SRN+ + +SD + I AKK G +D V + V L + Sbjct: 224 SNYSSTVAKSRNLTPQQVQTISDTQGILEATTAKKAGFVDEVAYLDRVIVLAKDLTGEAK 283 Query: 246 IRKIKDWNPPKNYWFCDLKNLSIS 269 K + ++ L N + S Sbjct: 284 -NKTNEEGNSGSFSQISLANYASS 306 >gi|302035808|ref|YP_003796130.1| peptidase S49, putative signal peptide peptidase SppA [Candidatus Nitrospira defluvii] gi|300603872|emb|CBK40204.1| Peptidase S49, putative signal peptide peptidase SppA [Candidatus Nitrospira defluvii] Length = 299 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 14/292 (4%) Query: 4 VLKKIKTRYVM----LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIER 59 +L++I V+ L L+ + +SS VA I I G I D+Q I ++ Sbjct: 15 LLRRIFWAIVIGGGALILLNALLPDLDFSSQ-----DRVALIRIEGVILDAQATISELKH 69 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCA 117 S + A+++ + SPGG + I A+++VKN+ K VI + +AAS GY I+ A Sbjct: 70 YSENPLVKAIVLRIDSPGGGVVPSQEIHDAVKRVKNKSNKAVIASMGTVAASGGYYIAAA 129 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I+A +L GSIGV+ + + + K+GV +KS K SP +++ + ++ Sbjct: 130 TDRIIANPGTLTGSIGVIMEMANFEGLMKKVGVEGVVIKSGRFKDVGSPLRKMSDEERKL 189 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q V+D +H F++ V++ R++ L+DGRI+TG +AK+ L+D +G ++ Sbjct: 190 LQSVMDDVHHQFIQAVADGRSLEVSDVEPLADGRIYTGRQAKEARLVDELGDLDDAIHIA 249 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + + K+ + P K + F D+ +S+ + L K++ L A Sbjct: 250 ADIAGMEGEPKVVE--PRKRFSFRDIIESRWASVFP-KLELNTGVKLKYLMA 298 >gi|297529049|ref|YP_003670324.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. C56-T3] gi|297252301|gb|ADI25747.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. C56-T3] Length = 335 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 18/274 (6%) Query: 36 PHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +A + + G I+D+ Q ++ I++ D A+I+ ++SPGG Sbjct: 60 KKIAVLEVNGVIQDAGEAESFLSSSQYNHQTFLQMIKQAKEDQDVKAIILRINSPGGGVA 119 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I+ + K+K + KP+ + MAAS GY I+ A + I A+ ++ GSIGV+ Q Sbjct: 120 ESAEIYDQLMKLKKKTNKPIYVSMGAMAASGGYYIAAAGDKIFASPETITGSIGVIMQSV 179 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + K GV + ++KS P K +P ++ +++Q +++ SY FV +V++ R + Sbjct: 180 NYEGLAKKYGVELVTIKSGPYKDIMNPARKMTEAEREILQQLINDSYDAFVDVVAKGRKL 239 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKN 257 P D L+DGRI+ G +AK + L+D G ++ +L + +K N P + Sbjct: 240 PEDTVRKLADGRIYDGRQAKALLLVDEFGYLDDAIAALKKEHHLTGAQVVKYVNDAPWSS 299 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + + S I L+ + L ++ Sbjct: 300 LFEMVSNRMKPDSEAAGLIRLLSRPSSPRLMYLY 333 >gi|308174636|ref|YP_003921341.1| signal peptide peptidase [Bacillus amyloliquefaciens DSM 7] gi|307607500|emb|CBI43871.1| signal peptide peptidase [Bacillus amyloliquefaciens DSM 7] gi|328554562|gb|AEB25054.1| signal peptide peptidase [Bacillus amyloliquefaciens TA208] gi|328912966|gb|AEB64562.1| signal peptide peptidase [Bacillus amyloliquefaciens LL3] Length = 335 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 135/266 (50%), Gaps = 18/266 (6%) Query: 35 SPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSA 80 +A + + G IEDS E ++ IER D + +++ ++SPGG Sbjct: 57 GSKIAVLEVDGTIEDSGESAGLLSSGGYDHRSFLKHIERAKEDKNVKGIVLKINSPGGGV 116 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I + ++++K +KP+ + MAAS GY IS A++ I A+ +L GS+GV+ + Sbjct: 117 YESAEIHKKLEELKKETKKPIYVSMGSMAASGGYYISTAADKIYASPETLTGSLGVIMES 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 D+LG+ +++KS K SP ++ + ++MQ +V+ SY FV ++S+ R+ Sbjct: 177 VNYSKLADELGIKFETIKSGAHKDIMSPTRDMTKEERKIMQTMVNDSYEGFVNVISKGRH 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + ++DGR++ G +AKK+GL+D +G ++ ++ + + + + + Sbjct: 237 MSKADVKKIADGRVYDGRQAKKIGLVDELGFYDDTISAMKKDHKNMKNASVITYE--EGF 294 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 L ++S + + + I + ++ Sbjct: 295 GLGSLFSMSAAKMFKSEIDFLNMKEL 320 >gi|227820608|ref|YP_002824578.1| signal peptide peptidase S49, SppA [Sinorhizobium fredii NGR234] gi|227339607|gb|ACP23825.1| signal peptide peptidase S49, SppA [Sinorhizobium fredii NGR234] Length = 319 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 124/301 (41%), Positives = 189/301 (62%), Gaps = 14/301 (4%) Query: 6 KKIKTRYVMLSLVTLT----VVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 K R+ +++ L + + W+ E HVAR+ + G I+D +EL+ER+ERI+ Sbjct: 15 KLSFWRWTAAAILVLGGFALIAFSGWTEVSERAREHVARVTVSGVIQDDRELVERLERIA 74 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + SA ALIV++SSPGG+ Y GE +++AI+KV +KPV+++V +AASAGY+I+ A + I Sbjct: 75 DNKSAKALIVTISSPGGTTYGGEVLYKAIRKVAAKKPVVSDVRTLAASAGYMIALAGDRI 134 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ETS+ GSIGV+FQYP VK +DK+GVS++S+KS P+KAEPSPF +P+A M+Q + Sbjct: 135 VAGETSITGSIGVIFQYPQVKQLMDKVGVSLESIKSRPLKAEPSPFHPPSPEARAMIQTM 194 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D SY+WFV LV+E R +P + L L+DGRI+TG +A + L+D +GG +E+ L Sbjct: 195 IDDSYNWFVDLVAERRKLPRPEALALADGRIFTGRQALQGKLVDTIGGDDEIRAFLADRK 254 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTK--------VQGLWAVW 291 V + + + P ++ F +S + L D P M + + GL +VW Sbjct: 255 VSKDLPVVDWEAPGGSFPFGLSTVVSNWLKLLGYDAFPAMNGLEKIGGDKLFLDGLVSVW 314 Query: 292 N 292 Sbjct: 315 Q 315 >gi|189459815|ref|ZP_03008600.1| hypothetical protein BACCOP_00445 [Bacteroides coprocola DSM 17136] gi|189433425|gb|EDV02410.1| hypothetical protein BACCOP_00445 [Bacteroides coprocola DSM 17136] Length = 588 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 135/269 (50%), Gaps = 10/269 (3%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS 79 + VY+++ D S G+ +S+++I+ + ++ D+S A+++ ++SPGGS Sbjct: 306 VIAVYYAYGEIDGDES-------ADGEGINSEKVIKDLRKLREDESVKAVVLRVNSPGGS 358 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 AY E I+R + +K KPVI + + AAS GY ISCA++ IVA T+L GSIG+ P Sbjct: 359 AYGSEQIWREVSLLKQEKPVIVSMGDYAASGGYYISCAADWIVAEPTTLTGSIGIFGLVP 418 Query: 140 YVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + L DKLG++ VK++ + N + +MQ +V+ Y F + ++ R Sbjct: 419 NAEGLLKDKLGLNFDVVKTNELADLGDLTRPFNEEEKALMQGMVNKGYELFTKRCADGRK 478 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + +++GR+WTG AK + L+D +GG +E + + + + P K Sbjct: 479 MNIEDIKKIAEGRVWTGEMAKDLKLVDELGGLDEAVEVAASHAKIERYTLVSY--PEKED 536 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + L N S + + GL Sbjct: 537 FLTSLLNTRPSRYISSRMQENFGEYYNGL 565 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 104/276 (37%), Gaps = 44/276 (15%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDS-------------------Q 51 + +L +++L + S S V + ++G + + Sbjct: 22 FTILGIISLAGMVASTSGTETIVKDRSVFVLELKGSVMERYQENPIMQFLGEDYATYGLD 81 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGE-----AIFRAIQKVKNRKPVITEVHEM 106 +++ I + +D + + A+A + AI RA+ K I Sbjct: 82 DILTSIRKAKENDKIKGIYIDA-----GAFACQTASMQAIRRALVDFKESGKFIVAYAGA 136 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + Y I+ ++ ++A + +G G+ Q ++K LDK+GV ++ + K+ P Sbjct: 137 YSQGTYYIASVADKVIANPSGSIGWHGLSAQTMFLKGLLDKVGVEMQVFRVGTYKSAVEP 196 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-------GRIWTGAE 217 + +E++P + Q + S + + VSESR I D L+ ++ Sbjct: 197 YIATEMSPANREQTQAFIGSIWQQILNEVSESRKISVDSLNALASRNMDLQPAELY---- 252 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 GL D + ++EV L L + K+ + Sbjct: 253 -LSTGLADTLMYKDEVLAYLKQLTDCKEDEKLNTLS 287 >gi|158521991|ref|YP_001529861.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] gi|158510817|gb|ABW67784.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] Length = 299 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 141/293 (48%), Gaps = 4/293 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F+L + ++++ V +S E + V + ++G I S+++IE ++ Sbjct: 9 LFFILVLSAIVFGSATVISFVVGLYSGKPAFE-SGERVGIVEVKGVILSSEQVIEELKTF 67 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 +D+ A++V + SPGG+ + IFR I K K V+ + +AAS GY ++ A+ Sbjct: 68 REEDAIRAIVVRIDSPGGAVGPAQEIFREIHKTAATKKVVASMGSVAASGGYYVASATEK 127 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +L GSIGV+ Y + +DK+G+ +KS K SP + + +++Q+ Sbjct: 128 IFANPGTLTGSIGVIMSYTNFQELMDKIGLLPVVIKSGKYKDIGSPVRPLEEREKRILQE 187 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 D + F+ V+ RN+ L+DGRI+TG +A ++GL+D +G E+ +++ + Sbjct: 188 FADDIHQQFIDDVAAGRNMDAGAVAKLADGRIYTGRKALELGLVDELGNLEDAVETVGRM 247 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + I P + F L L S E+ + + ++ P Sbjct: 248 AGIKG--DIVQVYPERKTKFS-LTELLTGSSAEELANTLMHGQALSAGYLYRP 297 >gi|218886796|ref|YP_002436117.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757750|gb|ACL08649.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 297 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 16/292 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDN-----SPHVARIAIRGQIEDSQELIERIERIS 61 I ++L+ V L + + H+ P V + + G I D + ++ + Sbjct: 15 FIFGFLLILAAVALFMGASAALRHLTGGAGPFAGPRVGVVRVEGMIADISKTTAWMDTLR 74 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D S +++ + SPGG A + + A++++ KPV+ + +AAS GY IS + + Sbjct: 75 DDPSVRGVLLRVDSPGGGVAASQELLDAVRRMARVKPVVVSMGTVAASGGYYISLGATRV 134 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A +L GSIGV + P V+ +DKLG++ +++ S MK SPF + P+ + +Q + Sbjct: 135 IANPATLTGSIGVKMELPNVQGLMDKLGLARQTLVSGDMKDAGSPFRAMTPQEREYLQAL 194 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V Y FV V+ SRN+P +K ++DGR TG +A ++GL+D +GG + L L Sbjct: 195 VMDMYDQFVTEVANSRNLPVEKVRAVADGRALTGRQAHELGLVDALGGMDMALTDLQQLC 254 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV--QGLWAVW 291 R + P + W D LE + L ++V G V+ Sbjct: 255 GIAE-RPVLVEQPKPSSWLRD--------ALETVLDLQPASRVITPGFLYVY 297 >gi|16080005|ref|NP_390831.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. 168] gi|221310897|ref|ZP_03592744.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. 168] gi|221315223|ref|ZP_03597028.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320141|ref|ZP_03601435.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324422|ref|ZP_03605716.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. SMY] gi|14548269|sp|O34525|SPPA_BACSU RecName: Full=Putative signal peptide peptidase sppA gi|2293234|gb|AAC00312.1| putative protease [Bacillus subtilis] gi|2635437|emb|CAB14931.1| signal peptide peptidase [Bacillus subtilis subsp. subtilis str. 168] Length = 335 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 141/277 (50%), Gaps = 20/277 (7%) Query: 26 SWSSHVEDNSP--HVARIAIRGQIEDSQE--------------LIERIERISRDDSATAL 69 S +E+ SP +A + + G I+D+ + ++ +ER D + + Sbjct: 46 SQEKTLENGSPSSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGI 105 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++ ++SPGG Y I + ++++K +KP+ + MAAS GY IS A++ I A + Sbjct: 106 VLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPET 165 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GS+GV+ + DKLG+S +++KS K SP E+ + +MQ +VD+SY Sbjct: 166 LTGSLGVIMESVNYSKLADKLGISFETIKSGAHKDIMSPSREMTKEEKNIMQSMVDNSYE 225 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 FV ++S+ R +P + ++DGR++ G +AKK+ L+D +G ++ ++ D Sbjct: 226 GFVDVISKGRGMPKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNA 285 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + + +++ L ++ + + + I + ++ Sbjct: 286 SVISYE--ESFGLGSLFSMGANKMFKSEIDFLNMREI 320 >gi|251772979|gb|EES53536.1| Peptidase S49 (SppA) [Leptospirillum ferrodiazotrophum] Length = 296 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 11/276 (3%) Query: 4 VLKKIKTRYVMLSLVTLTV-------VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIER 56 + KKI + ++ +V + +FS S + + + I G I S++ I + Sbjct: 2 LFKKIFRAFFVIVVVLGILFVLGRGAAFFSRSVPI-VGGAEIGVVRISGVILSSRKPIRQ 60 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLIS 115 I ++RD A+++ + SPGG+ + I+ + K + KPVI + + AS Y I+ Sbjct: 61 IRALARDPRVKAILLRIDSPGGAVVPSQDIYEEVMKARKSGKPVIASIGTVGASGAYYIA 120 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + I+A+ SL GSIGV+ + + + K+GV + +KS +K SPF + P+ Sbjct: 121 SACDRIIASPGSLTGSIGVIMELAQFEDLMKKIGVQSEVMKSGSLKDAGSPFRPMTPEEK 180 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q V+D + F+R V++ R++ L+DGR++TGA A L+D +G + Sbjct: 181 AYLQSVLDEMHRQFIRDVAKGRHLQVSAIEPLADGRVFTGASAIGNHLVDSLGDYNDALD 240 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + ++ + P+ + + + + L Sbjct: 241 EAAKMAHISGKPVVRRF--PEKSFLDKMVSSQVGHL 274 >gi|261856346|ref|YP_003263629.1| signal peptide peptidase SppA, 36K type [Halothiobacillus neapolitanus c2] gi|261836815|gb|ACX96582.1| signal peptide peptidase SppA, 36K type [Halothiobacillus neapolitanus c2] Length = 350 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 131/276 (47%), Gaps = 20/276 (7%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDN------SPHVARIAIRGQIE-----DSQELIE 55 ++ R + L+LV + + S S ++D+ P I I G I ++E+I Sbjct: 61 RVFFRLISLALVIWIIAWISLSGDLDDDHGVVIKQPSAGIIDISGVIAAGQEASAEEIIP 120 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGY 112 +E+ ++ +++ +++PGGS IF AI +++ KPV V ++ AS GY Sbjct: 121 VLEKAFKNTQIKGIVLRMNTPGGSPVQSGEIFDAIMRLRKEYPAKPVYAVVEDVCASGGY 180 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A + SLVGSIGV + KLG+ + + S KA PFS NP Sbjct: 181 YIAAAADKIFANQASLVGSIGVRMDSFGFVDAMQKLGIESRLITSGANKAMLDPFSPENP 240 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 VQ MQ+++D + F+ V + R L G I+TGA+A+K GLID +G Sbjct: 241 AQVQYMQNLLDQVHQQFIDAVKKGRGKRLANDPDLFSGLIYTGAQAQKNGLIDGLGTVRS 300 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 V + L + D P K+ + L S Sbjct: 301 VVRDELHLKNE------VDLTPSKSPFEELLGKTST 330 >gi|17988076|ref|NP_540710.1| putative protease IV [Brucella melitensis bv. 1 str. 16M] gi|17983826|gb|AAL52974.1| putative protease iv [Brucella melitensis bv. 1 str. 16M] Length = 301 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 183/290 (63%), Gaps = 13/290 (4%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSL 73 +L+ + ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L Sbjct: 2 LLAALIAGFAFYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLL 60 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG+ GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIG Sbjct: 61 DSPGGTTVGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIG 120 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 VLFQYP + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V Sbjct: 121 VLFQYPDLSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIV 180 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 E R +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W Sbjct: 181 QERRAFTHEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWK 239 Query: 254 PPKNYWFCDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 P + L++L I + L ++ +K + + GL +VW+ Sbjct: 240 PVGSETGFSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 289 >gi|158335227|ref|YP_001516399.1| signal peptide peptidase SppA [Acaryochloris marina MBIC11017] gi|158305468|gb|ABW27085.1| signal peptide peptidase SppA, 36K type [Acaryochloris marina MBIC11017] Length = 315 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 149/305 (48%), Gaps = 25/305 (8%) Query: 11 RYVMLSLVTLTVVYF-------SWSSHVEDNSPHVARIAIRGQIED-------------- 49 R + L+LVTL ++ S + + S +VA+I + G I D Sbjct: 5 RVLALALVTLCLIAALGNWLGGSVNKSKDQGSANVAQINVYGVISDEASGGPFSSGEGAN 64 Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMA 107 + +LI I++ DD A+++ ++SPGG+A A +A++ + + + ++ + ++A Sbjct: 65 ANKLISNIKKAREDDGIKAILLRINSPGGTAAASQAVYEELMRTRKDTDIKIVASLGDVA 124 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY I+ A++ IVA +S+ GSIGV+ Q V LDK+GV + S P+K SPF Sbjct: 125 ASGGYYIASAADHIVANPSSITGSIGVIVQTQNVTSLLDKVGVQTNTFTSGPLKDILSPF 184 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 E P+ +++Q +VD SY F+ + R +P +K L+DGRI+TG +AK L+D + Sbjct: 185 RETKPEERKILQSIVDDSYQQFLDAIVAGRGMPLEKLKPLADGRIYTGTQAKDNKLVDSL 244 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 G + L K+KD+ K F D +S + + Sbjct: 245 GNYYDALDKTAELANISGDPKVKDFG--KGSLFGDFGPFLSTSNQSFPQLTTEWLSSKSQ 302 Query: 288 WAVWN 292 W W+ Sbjct: 303 WPRWH 307 >gi|197122751|ref|YP_002134702.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] gi|196172600|gb|ACG73573.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] Length = 382 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 131/234 (55%), Gaps = 6/234 (2%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P V I ++G I ++++++++RI R + D A+++ + SPGGS A + I Sbjct: 115 SGPRVGVIDVKGTIGGGERDETEDILKRIRRFAEDGDLKAVVIRVDSPGGSVGASQEIHD 174 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++++ +K V+ + +AAS G +S A IVA +L GSIGV+ Q+P VK +KL Sbjct: 175 EVKRLAQKKVVVCSMGNLAASGGLYVSVACPKIVANPGTLTGSIGVISQFPNVKDLAEKL 234 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV +++VK+ +K +PF ++ P+ Q +V+++ FV+ V+E R + K ++ Sbjct: 235 GVKVETVKTGKLKDAGNPFRDMTPEDRAYWQGLVENTLGQFVKAVAEGRKLDEAKVRAIA 294 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 DGR+ TGA+AK+ GL+D +G + L S + + P ++ F + Sbjct: 295 DGRVLTGAQAKEAGLVDQLGNFYDAV-ELAKQEAKLSGEAVLVYPPDEHGRFLE 347 >gi|220917534|ref|YP_002492838.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] gi|219955388|gb|ACL65772.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] Length = 382 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 131/234 (55%), Gaps = 6/234 (2%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P V I ++G I ++++++++RI R + D A+++ + SPGGS A + I Sbjct: 115 SGPRVGVIDVKGTIGGGERDETEDILKRIRRFAEDGDLKAVVIRVDSPGGSVGASQEIHD 174 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++++ +K V+ + +AAS G +S A IVA +L GSIGV+ Q+P VK +KL Sbjct: 175 EVKRLAQKKVVVCSMGNLAASGGLYVSVACPKIVANPGTLTGSIGVISQFPNVKDLAEKL 234 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV +++VK+ +K +PF ++ P+ Q +V+++ FV+ V+E R + K ++ Sbjct: 235 GVKVETVKTGKLKDAGNPFRDMTPEDRAYWQGLVENTLGQFVKAVAEGRKLDEAKVRAIA 294 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 DGR+ TGA+AK+ GL+D +G + L S + + P ++ F + Sbjct: 295 DGRVLTGAQAKEAGLVDQLGNFYDAV-ELAKQEAKLSGEAVLVYPPDEHGRFLE 347 >gi|224024636|ref|ZP_03643002.1| hypothetical protein BACCOPRO_01364 [Bacteroides coprophilus DSM 18228] gi|224017858|gb|EEF75870.1| hypothetical protein BACCOPRO_01364 [Bacteroides coprophilus DSM 18228] Length = 589 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 145/296 (48%), Gaps = 15/296 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------QELIE 55 +K + + +L ++ ++ + +S +A G+I++S +++I Sbjct: 276 LKEKDKLHTLTLSDMINVKRNTPRDKSSNIIAVYYAYGEIDNSSSYNYNEEGINSEKVIT 335 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 + ++ D + A+++ ++SPGGSAY E I+R ++ +K KPVI + + AAS GY IS Sbjct: 336 DLRKLREDKNIKAVVLRVNSPGGSAYGSEQIWREVKLLKEEKPVIVSMGDYAASGGYYIS 395 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 CA++ IVA T+L GSIG+ P + KL + I VK++ + + +N + Sbjct: 396 CAADWIVAEPTTLTGSIGIFGMVPDFSELVTQKLDLHIDGVKTNKLADLGNIARPLNAEE 455 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++Q V++ Y F R +E RN+P + +++GR+WTGA AK++ L+D +G + Sbjct: 456 KALIQQSVNNGYELFTRRCAEGRNMPIEDLKKIAEGRVWTGAMAKELKLVDELGNLQTAL 515 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 ++ ++ + P + L S ++ + +G + Sbjct: 516 KAASQHAKIENYNVVAY--PKPEDFLTTLMKTRKDSYIQSQVEATFGDFSKGFTLL 569 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 111/272 (40%), Gaps = 41/272 (15%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------- 50 ++++ + ++ + S + ++ V + ++G I + Sbjct: 20 FIFMIIGIASVAGLLASSETETTVHNNSVFVLDLQGSIAERYQPTPIDQLLDEEQSVYGL 79 Query: 51 QELIERIERISRDDSATALIVSLSSPG----GSAYAGEAIFRAIQKVKNR-KPVITEVHE 105 ++ I + +D + +++ G GSA + I +A+ K K +I Sbjct: 80 NDISASIAKAKENDQIKGIYLNV---GNFSCGSAS-LQEIRQALADFKESGKFIIAYGGG 135 Query: 106 MAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + S Y ++ ++ I+ + GSI G+ Q +VK L K+G++++ + K+ Sbjct: 136 YSQSG-YYLASIADKIILNPS---GSISWHGLSAQTLFVKDLLKKVGINVQIFRVGTYKS 191 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA-- 218 P +E++P + Q V S ++ +++SR + ++ +L+D + A Sbjct: 192 AVEPLIGTEMSPANKEQTQAFVQSIWNQMTDDIAQSRQLTQEQLNILAD-QYMDFQLADS 250 Query: 219 -KKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL D + ++EV L + + K+ Sbjct: 251 CIANGLADTLMYKDEVLAYLKSQIGLKEKDKL 282 >gi|326537889|gb|ADZ86104.1| signal peptide peptidase SppA, 36K type [Brucella melitensis M5-90] Length = 331 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 108/283 (38%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 39 GFAFYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 97 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 98 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 157 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 158 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 217 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 218 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 276 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 277 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 319 >gi|325299675|ref|YP_004259592.1| signal peptide peptidase SppA, 67K type [Bacteroides salanitronis DSM 18170] gi|324319228|gb|ADY37119.1| signal peptide peptidase SppA, 67K type [Bacteroides salanitronis DSM 18170] Length = 588 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 13/270 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSPGGSAY 81 + + +A G I + ++ + + R+ D+S A++ ++SPGGSA+ Sbjct: 301 DKSGNVLAVYYATGTIGSGELSADEGIHPEKVAKDLRRLREDESVKAVVFRVNSPGGSAF 360 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I+R I +K +KPVI + + AAS GY I+CA++ I+A T+L GSIG+ P Sbjct: 361 GSEEIWREITLLKEQKPVIVSMGDYAASGGYYIACAADWIIAQPTTLTGSIGIFGYIPNA 420 Query: 142 KPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + L DKLG+ VK++ + + +MQ++V+ Y F + ++ R +P Sbjct: 421 EKLLNDKLGIHFDGVKTNKLSDLGDISRPFTEEETALMQNMVNHGYELFTQRCADGRKMP 480 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 D+ +++GR+WTG AK + L+D +GG + ++ + P + +F Sbjct: 481 VDEIKRIAEGRVWTGKMAKDLKLVDELGGIDRAIAVAAERAEIENYTVMSY--PKQEDFF 538 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 L + L + + + Sbjct: 539 SSLLSSGTDRYLSARLKAELGALYEPFRYL 568 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 103/267 (38%), Gaps = 42/267 (15%) Query: 12 YVMLSLVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDS-------------------Q 51 + ++ ++++ + S S S + + V + ++G +E+ Sbjct: 22 FAIIGVMSIAGMVASSSGSETKVSDNSVFILNLKGSVEERVQPNPLSQLVGEEFGTYGLD 81 Query: 52 ELIERIERISRDDSATALIVSLSSPGGS----AYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ I++ ++ + + G+ + E I A++ K I Sbjct: 82 DILGSIKKAKDNEKIKGICLDA----GAFVCPPASLEEIRNALKDFKESGKFIVAYGGNY 137 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ ++ + +G G+ Q ++K LDK+GV ++ + K+ P+ Sbjct: 138 LQSTYYLASVADKVAINPQGSLGWHGLATQTYFLKDLLDKIGVEMQIFRVGTYKSAVEPY 197 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-------GRIWTGAEA 218 +E++P + Q +S + V V+ SR IP D L+D ++ Sbjct: 198 TSTEMSPANREQTQAFANSIWGQMVDEVAASRRIPADSLNALADRNMDLQPAELY----- 252 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQS 245 K GL D + Q+E+ L L Sbjct: 253 IKTGLADTLMYQDEMLAYLKQLTETDE 279 >gi|256112659|ref|ZP_05453580.1| signal peptide peptidase SppA, 36K type [Brucella melitensis bv. 3 str. Ether] gi|265994099|ref|ZP_06106656.1| signal peptide peptidase SppA [Brucella melitensis bv. 3 str. Ether] gi|262765080|gb|EEZ11001.1| signal peptide peptidase SppA [Brucella melitensis bv. 3 str. Ether] Length = 327 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 108/283 (38%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 315 >gi|225851687|ref|YP_002731920.1| signal peptide peptidase SppA, 36K type [Brucella melitensis ATCC 23457] gi|256045946|ref|ZP_05448818.1| signal peptide peptidase SppA, 36K type [Brucella melitensis bv. 1 str. Rev.1] gi|256264800|ref|ZP_05467332.1| clp protease [Brucella melitensis bv. 2 str. 63/9] gi|260563227|ref|ZP_05833713.1| clp protease [Brucella melitensis bv. 1 str. 16M] gi|265992356|ref|ZP_06104913.1| signal peptide peptidase SppA [Brucella melitensis bv. 1 str. Rev.1] gi|225640052|gb|ACN99965.1| signal peptide peptidase SppA, 36K type [Brucella melitensis ATCC 23457] gi|260153243|gb|EEW88335.1| clp protease [Brucella melitensis bv. 1 str. 16M] gi|263003422|gb|EEZ15715.1| signal peptide peptidase SppA [Brucella melitensis bv. 1 str. Rev.1] gi|263095211|gb|EEZ18880.1| clp protease [Brucella melitensis bv. 2 str. 63/9] gi|326408176|gb|ADZ65241.1| signal peptide peptidase SppA, 36K type [Brucella melitensis M28] Length = 327 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 108/283 (38%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S E N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AEFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 315 >gi|332886098|gb|EGK06342.1| signal peptide peptidase SppA, 67K type [Dysgonomonas mossii DSM 22836] Length = 584 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 125/242 (51%), Gaps = 9/242 (3%) Query: 32 EDNSPHVARIAIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ +A + G I + + ++ IE++ +D A++ ++SPGGSAYA Sbjct: 300 SNSKDVIAILYAEGSINNGSGKDGITDKRYVKEIEKLKDNDKVKAVVFRVNSPGGSAYAS 359 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I++AI +K +KPV+ + + AAS GY I+C ++ I+A +L GSIG+ +P + Sbjct: 360 EQIWKAITDLKAKKPVVVSMGDYAASGGYYIACNASKIIAQPNTLTGSIGIFGMFPNFEG 419 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K+G+S +VK++ + P+ ++Q ++ Y F+ SE RNIP D Sbjct: 420 LTKKVGLSFDNVKTNKFADFGDATRPMRPEEKVILQQYIEHGYDLFLTRCSEGRNIPKDS 479 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+WTG +A K+GL+D +G + Q L ++D+ ++ L Sbjct: 480 LDHIAQGRVWTGNQALKIGLVDALGNIDTAIQEAAKLAKLDDYS-LQDYPKKVDFLESLL 538 Query: 264 KN 265 N Sbjct: 539 SN 540 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 84/208 (40%), Gaps = 12/208 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE----AIFRAIQKVKNRKPVITEVHEM 106 +++ I++ +D+ + +++ G+ A I + K I ++ Sbjct: 81 DDILSSIKKAKENDNIKGI--YINA--GAFAASNASLKEIRDQLADFKESGKFIIAYADV 136 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + Y +S ++ ++ + G+ + K LDK+G+ ++ K K+ P Sbjct: 137 YSQGCYYLSSVADKVIMNPQGNLDLHGLSSSPTFYKGLLDKIGIEMQIFKVGTFKSAVEP 196 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVG 222 F +++ + + ++ + +S+SR I DK L+D + G Sbjct: 197 FMLDKMSDANREQVTAYINDIWSTITSEISDSRKISVDKINQLTDSLQTFKLANASVTDG 256 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIK 250 L+D + + EV + L L + ++ ++ Sbjct: 257 LVDTLMYETEVKEYLKDLLKVEKVKDVR 284 >gi|237722788|ref|ZP_04553269.1| protease IV [Bacteroides sp. 2_2_4] gi|293371818|ref|ZP_06618228.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CMC 3f] gi|229447310|gb|EEO53101.1| protease IV [Bacteroides sp. 2_2_4] gi|292633270|gb|EFF51841.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CMC 3f] Length = 592 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 131/257 (50%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ +D A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYPSSATSEDGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ + N ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTDKIGLSYDVVKTNKYADFGNIMRPFNEDEKSLLQMMITEGYDTFVTRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+D +GG ++ A + + P K + Sbjct: 483 TKEAIEKIAEGRVWTGETAKELGLVDELGGIDKALDIAVAKAGIEGYTVVSY--PEKQDF 540 Query: 260 FCDLKNLSISSLLEDTI 276 L + ++ +E + Sbjct: 541 LSSLLDTKPTNYVESQL 557 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 28/256 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++S+VTL + + + V + + G + + Sbjct: 22 LFIISMVTLFGIMSASDTETIVKKNSVMMLDLNGTLVERTQEDPLDILSQLLGDGSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I++ +++ + + +S G S + + I A+ K + + Sbjct: 82 LDDILSSIQKAKENENIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQ 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 142 GLYYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIA 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLI 224 +E++P + + + S + VS SRNI D V +D R + E+ K GL Sbjct: 202 TEMSPANREQVTTFITSIWGQVTEGVSTSRNISVDSLNVYAD-RMLMFYPAEESVKCGLA 260 Query: 225 DVVGGQEEVWQSLYAL 240 D + + +V L L Sbjct: 261 DTLIYRNDVRNYLKKL 276 >gi|163753142|ref|ZP_02160266.1| protease IV [Kordia algicida OT-1] gi|161326874|gb|EDP98199.1| protease IV [Kordia algicida OT-1] Length = 589 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 117/216 (54%), Gaps = 9/216 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 V+ + +A I +GQI ++ + + ++ D++ A+++ ++SPGGS Sbjct: 297 PTVKKSDEKIAVIYAQGQIMYAEGNENFIGQGVINKALKEAREDENVKAIVLRVNSPGGS 356 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E I+R I+ K KPVI + ++AAS GY I+C ++ I A ++ GSIGV P Sbjct: 357 ALASELIWREIELTKKEKPVIVSMGDLAASGGYYIACNADKIYAEPNTITGSIGVFGTIP 416 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + LG++ + V ++ + S F ++ + ++++ ++ Y F + V++ R + Sbjct: 417 NMHKLAEDLGINAEQVGTNKNAVDYSIFEPMSDEQRALIKEGIEDIYDLFTQRVADGRGM 476 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + GR+WTG +A K+GL+D +GG + Q Sbjct: 477 TQEAVDEIGQGRVWTGNDAIKIGLVDEIGGLDMALQ 512 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 14/211 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +I+ I DD + + ++ +A+ A+ K I + + Sbjct: 82 NIIDAIHYAKDDDKIKGISIKNNTLQAGMAQTKALRDALLAFKESGKFIVSYGDYYSQKD 141 Query: 112 YLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y ++ ++ + VG + G+ + Y K F +K G+ ++ ++ K+ + Sbjct: 142 YYLNSVADTVYLNP---VGGLDFKGLSMERMYYKDFQEKYGIKMEVIRHGKYKSAVEGYL 198 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGL 223 E++ + + + S + ++ESRN+ D L+D GR T A V L Sbjct: 199 NQEMSEANREQISVFLQSIWDEMRTEIAESRNLSSDHLNTLADELAGR--TATRALNVKL 256 Query: 224 IDVVGGQEEVWQSL-YALGVDQSIRKIKDWN 253 ID +G ++E + YA+G + I ++ ++ Sbjct: 257 IDKIGYEDEYEAGIQYAMGENSDINRVNIYD 287 >gi|224536205|ref|ZP_03676744.1| hypothetical protein BACCELL_01072 [Bacteroides cellulosilyticus DSM 14838] gi|224522189|gb|EEF91294.1| hypothetical protein BACCELL_01072 [Bacteroides cellulosilyticus DSM 14838] Length = 589 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 133/257 (51%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G I+ +S ++I + ++ D A+++ ++SPGGS Sbjct: 300 DKSGNIVAVYYAYGAIDSGSSYAGSEDGINSDKVIRDLRKLKDDKDVKAVVLRVNSPGGS 359 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+ E I+ A+ ++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ +P Sbjct: 360 AFGSEQIWYAVTELKKEKPVIVSMGDYAASGGYYISCNADSIVADPTTLTGSIGIFGMFP 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ + +N +MQ++V+ Y FV+ +E R + Sbjct: 420 NVKGLTDKIGLSFDVVKTNTYADFGAMGRPLNDGEKALMQNMVNEGYELFVKRCAEGRGM 479 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D+ +++GR+WTG +AK++GL+D +GG ++ + + + P K + Sbjct: 480 TTDEIKKIAEGRVWTGTKAKELGLVDELGGLDKALEIAIEKAGLDAYTVMSY--PGKKSF 537 Query: 260 FCDLKNLSISSLLEDTI 276 F L + ++ I Sbjct: 538 FDMLTDTKPGGYIQSRI 554 Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 106/275 (38%), Gaps = 30/275 (10%) Query: 1 MEFVLKKIKTRYV------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---- 50 +F L I V +S++ L + S S + V + +RG + + Sbjct: 5 FKFTLATITGIIVSSVVLFFVSILILFSMLSSSESETQVRKNSVMMLDMRGMLSERSQDN 64 Query: 51 ---------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +++ I++ +++ + + S G + E I +A+ K Sbjct: 65 PFDIFLSEDETTYGLDDILSSIQKAKENENIKGIYLQAGSMGIGFASLEEIRKALADFKT 124 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + + + Y ++ ++ ++ +G G+ + K L K+GV ++ Sbjct: 125 SGKFVVAYGDQYSQRLYYLASVADKVLLNPQGAIGWYGLASTPTFYKDLLSKIGVEMQVF 184 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--R 211 K K+ PF +E++P + + +D + + +SESR + +K +D Sbjct: 185 KVGTYKSAVEPFISTEMSPANREQVTVFLDGIWGQMLSDISESRGVSKEKLNEAADKMLM 244 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQS 245 + + + GL D + + +V L + G+D+ Sbjct: 245 FYPANDCVEYGLADTLVYKNDVRNYLKTMVGIDKD 279 >gi|160884948|ref|ZP_02065951.1| hypothetical protein BACOVA_02940 [Bacteroides ovatus ATCC 8483] gi|156109298|gb|EDO11043.1| hypothetical protein BACOVA_02940 [Bacteroides ovatus ATCC 8483] Length = 592 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 131/257 (50%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ +D A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYPSSATSEDGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ + N ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTDKIGLSYDVVKTNKYADFGNIMRPFNEDEKSLLQMMITEGYDTFVTRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+D +GG ++ A + + P K + Sbjct: 483 TKEAIEKIAEGRVWTGETAKELGLVDELGGIDKALDIAVAKAGIEGYTVVSY--PEKQDF 540 Query: 260 FCDLKNLSISSLLEDTI 276 L + ++ +E + Sbjct: 541 LSSLLDTKPTNYVESQL 557 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 28/256 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++S+VTL + + + V + + G + + Sbjct: 22 LFIISMVTLFGIMSASDTETIVKKNSVMMLDLNGTLVERTQEDPLGILSQLLGDGSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I++ +++ + + +S G S + + I A+ K + + Sbjct: 82 LDDILSSIQKAKENENIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQ 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 142 GLYYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIA 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLI 224 +E++P + + + S + VS SRNI D V +D R + E+ K GL Sbjct: 202 TEMSPANREQVTTFITSIWGQVTEGVSTSRNISVDSLNVYAD-RMLMFYPAEESIKCGLA 260 Query: 225 DVVGGQEEVWQSLYAL 240 D + + +V L L Sbjct: 261 DTLIYRNDVRNYLKKL 276 >gi|321312489|ref|YP_004204776.1| signal peptide peptidase [Bacillus subtilis BSn5] gi|320018763|gb|ADV93749.1| signal peptide peptidase [Bacillus subtilis BSn5] Length = 335 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 135/266 (50%), Gaps = 18/266 (6%) Query: 35 SPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSA 80 S +A + + G I+D+ + ++ +ER D + +++ ++SPGG Sbjct: 57 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGV 116 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I + ++++K +KP+ + MAAS GY IS A++ I A +L GS+GV+ + Sbjct: 117 YESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMES 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 DKLG+S +++KS K SP E+ + +MQ +VD+SY FV ++S+ R Sbjct: 177 VNYSKLADKLGISFETIKSGAHKDIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRG 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++DGR++ G +AKK+ L+D +G ++ ++ D + + +++ Sbjct: 237 MSKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNASVISYE--ESF 294 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 L ++ + + + I + ++ Sbjct: 295 GLGSLFSMGANKMFKSEIDFLNMREI 320 >gi|23501065|ref|NP_697192.1| signal peptide peptidase SppA [Brucella suis 1330] gi|62289130|ref|YP_220923.1| signal peptide peptidase SppA [Brucella abortus bv. 1 str. 9-941] gi|82699069|ref|YP_413643.1| Clp protease [Brucella melitensis biovar Abortus 2308] gi|148560143|ref|YP_001258187.1| signal peptide peptidase SppA [Brucella ovis ATCC 25840] gi|225626693|ref|ZP_03784732.1| signal peptide peptidase SppA, 36K type [Brucella ceti str. Cudo] gi|237814624|ref|ZP_04593622.1| signal peptide peptidase SppA, 36K type [Brucella abortus str. 2308 A] gi|256368618|ref|YP_003106124.1| signal peptide peptidase SppA [Brucella microti CCM 4915] gi|297247546|ref|ZP_06931264.1| protease IV [Brucella abortus bv. 5 str. B3196] gi|23346932|gb|AAN29107.1| signal peptide peptidase SppA [Brucella suis 1330] gi|62195262|gb|AAX73562.1| SppA, signal peptide peptidase SppA [Brucella abortus bv. 1 str. 9-941] gi|82615170|emb|CAJ10109.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Brucella melitensis biovar Abortus 2308] gi|148371400|gb|ABQ61379.1| signal peptide peptidase SppA [Brucella ovis ATCC 25840] gi|225618350|gb|EEH15393.1| signal peptide peptidase SppA, 36K type [Brucella ceti str. Cudo] gi|237789461|gb|EEP63671.1| signal peptide peptidase SppA, 36K type [Brucella abortus str. 2308 A] gi|255998776|gb|ACU47175.1| signal peptide peptidase SppA [Brucella microti CCM 4915] gi|297174715|gb|EFH34062.1| protease IV [Brucella abortus bv. 5 str. B3196] Length = 331 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 39 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 97 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 98 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 157 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 158 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 217 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 218 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 276 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 277 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 319 >gi|161618142|ref|YP_001592029.1| signal peptide peptidase SppA, 36K type [Brucella canis ATCC 23365] gi|254705333|ref|ZP_05167161.1| signal peptide peptidase SppA, 36K type [Brucella suis bv. 3 str. 686] gi|261756044|ref|ZP_05999753.1| signal peptide peptidase SppA [Brucella suis bv. 3 str. 686] gi|161334953|gb|ABX61258.1| signal peptide peptidase SppA, 36K type [Brucella canis ATCC 23365] gi|261745797|gb|EEY33723.1| signal peptide peptidase SppA [Brucella suis bv. 3 str. 686] Length = 327 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIVRDRIFLDGLLSVWH 315 >gi|333029937|ref|ZP_08457998.1| signal peptide peptidase SppA, 67K type [Bacteroides coprosuis DSM 18011] gi|332740534|gb|EGJ71016.1| signal peptide peptidase SppA, 67K type [Bacteroides coprosuis DSM 18011] Length = 591 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 141/264 (53%), Gaps = 12/264 (4%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSL 73 F + ++A G I D+ + +++ ++++ +++ A+++ + Sbjct: 296 VFIPKDQTKKKDGNIAIYYAEGDIVDASNKFASAIVGESVVKDLKKLEENENIKAVVLRV 355 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +SPGGSAYA E I++A+ +K +KPVI + + AAS GY IS A++ I+A T+L GSIG Sbjct: 356 NSPGGSAYASEQIWKAVVDLKAKKPVIVSMGDYAASGGYYISAAADHIIAEPTTLTGSIG 415 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + P + +K+G++ VK++ S F N Q++Q ++ Y F++ Sbjct: 416 IFAMIPSFEKVANKVGLNFDVVKTNKHADFGSIFRNFNADERQLLQFYIEEGYGLFIKRC 475 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++ R I ++ +++GR+WTGA+AK++GLID +GG + + + + ++ + Sbjct: 476 ADGRGISEEEIRKIAEGRVWTGAKAKEIGLIDELGGLNDALEYAASKAGLTTY-NVRTY- 533 Query: 254 PPKNYWFCDLKNLSISSLLEDTIP 277 P + +F L ++ +++ I Sbjct: 534 PTQPDFFEQLLQMTSQDMVKTYIE 557 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 4/193 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +L+ I++ + + + + S + EAI +A+ K I + Sbjct: 86 NDLLSSIKKAKNHSNIKGIYIEAKNLSASFASLEAIRKALIDFKESGKFIISYADQYTQG 145 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ ++ + + G+ Q + L +GV ++ K K+ P++E Sbjct: 146 LYYLASVADEVHLNPKGGLLWAGLAAQPMFYTTLLKNIGVDMQIFKVGTYKSAVEPYTET 205 Query: 171 NPKAVQMMQDVV--DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVGLIDV 226 Q V + + V VS +RNI +K +D + A L+D Sbjct: 206 KMSQANKEQVSVFLNDIWSHIVSGVSTARNISQEKLQEYADKMVLFQPTEFALNNHLVDK 265 Query: 227 VGGQEEVWQSLYA 239 + + +V ++ Sbjct: 266 LSYRYDVQNAIKE 278 >gi|332708205|ref|ZP_08428195.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] gi|332353031|gb|EGJ32581.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] Length = 605 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 9/251 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSP 76 S S + +A I G I D Q +++ + D A+++ ++SP Sbjct: 307 SPYSKNRKSKHKIAIIYAEGSIVDGQGNFEQVGGERFAKQLRELRLDKDIKAVVLRVNSP 366 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA A E I R ++ ++ KPVI + +AAS GY IS S+ I A ++ GSIGV Sbjct: 367 GGSATASEIIQREVRLIREEKPVIVSMGNVAASGGYWISTYSDRIFAEPNTITGSIGVFG 426 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ + G++ V++ + S + + + Q +V+ Y F+ V+ES Sbjct: 427 VLFNIQELANNNGLTWDIVQTGSLADIQSTVRPKTDQELAIYQTMVNQIYDQFIDKVAES 486 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R +P K ++ GR+W+G +AK++GL+D +GG + + + K++++ Sbjct: 487 RKLPKGKVKDIAQGRVWSGIDAKQIGLVDEIGGINDAIKHAAKQAKLKDDWKVEEYPKIP 546 Query: 257 NYWFCDLKNLS 267 ++ LK LS Sbjct: 547 SFEEMILKTLS 557 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 124/284 (43%), Gaps = 43/284 (15%) Query: 4 VLKKIKTRYVMLSLVTL------------TVVYFSWSSHVEDNSPHVA---RIA--IRGQ 46 + + T + L+ + +V+ F S ++ D +P + I + GQ Sbjct: 21 LFFSLATSGFLFLLIAVASKDTGPQVQDKSVLVFDLSVNISDTNPTSSTSEVIEEVLSGQ 80 Query: 47 ---IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE---------AIFRAIQKVK 94 I +++++ +++ ++D AL + GSA + A+++ + Sbjct: 81 QTNIIPLRKVLDTLDKATKDKRIVALYLD-----GSASKTVGNTGLANLKEVREALERFR 135 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K +I ++ Y +S ++ I+ +V G+ ++ L K G+ ++ Sbjct: 136 AAGKKIIAYDVDLGERE-YYLSSVADTIILNPMGVVEINGLNSAQLFLTGALQKYGIGVQ 194 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 V+ K+ PF +++P++ + ++++D + F+ V +SR I +++ + Sbjct: 195 VVRVGKYKSAVEPFLLKQLSPESREQTRELLDDLWDEFLTTVGKSREITPKTLQAIANTK 254 Query: 212 -IWTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIK 250 + +EAK GL+D VG +EV +L L D+S RKIK Sbjct: 255 GMLIASEAKTQGLVDQVGYFDEVIATLKELTGEKKKDKSFRKIK 298 >gi|306842559|ref|ZP_07475210.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO2] gi|306287415|gb|EFM58895.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO2] Length = 327 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 107/270 (39%), Positives = 177/270 (65%), Gaps = 12/270 (4%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R++RI+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDRIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++D++ SY WFV +V E R+ +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRDMIMDSYDWFVGIVQERRSFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS--- 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPAGSETGFSLRDLIIHAGAR 285 Query: 271 ---LLEDTIPLMK-----QTKVQGLWAVWN 292 L ++ ++K + + GL +VW+ Sbjct: 286 LLGLPQEADGVIKEIARDRIFLDGLLSVWH 315 >gi|194017284|ref|ZP_03055896.1| signal peptidase SppA [Bacillus pumilus ATCC 7061] gi|194011152|gb|EDW20722.1| signal peptidase SppA [Bacillus pumilus ATCC 7061] Length = 333 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 17/263 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPG 77 + +A + I G I+D+ + ++ +E+ D S +++ ++SPG Sbjct: 53 GSGAGKIAVLEINGTIQDNGGASSLLGGEGYDHRAFLKELEKAKDDASVKGVLLRVNSPG 112 Query: 78 GSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I + +++VK +KP+ + MAAS GY +S + I A+ +L GS+GV+ Sbjct: 113 GGVYESAEIHKKLEEVKKAKKPIYVSMGSMAASGGYYVSTPAKKIFASPETLTGSLGVIM 172 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q D LG+ +++KS K SP ++ +MQ +VD+SY FV+++SE Sbjct: 173 QSLNYSKLADNLGIKYETIKSGKFKDIMSPNRDMTKDERDIMQSMVDNSYEGFVKVISEG 232 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + ++DGR++ G +AK GL+D +G E+ +++ + ++ + Sbjct: 233 RGMSKQDVKKIADGRVYDGTQAKSNGLVDELGYYEDAIKAMKKNEKGLKGATVVSYS--Q 290 Query: 257 NYWFCDLKNLSISSLLEDTIPLM 279 ++ + L N+S S L + I + Sbjct: 291 SFGWNSLFNMSASKLFKSEIDFL 313 >gi|306844422|ref|ZP_07477012.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO1] gi|306275235|gb|EFM56985.1| signal peptide peptidase SppA, 36K type [Brucella sp. BO1] Length = 327 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 176/270 (65%), Gaps = 12/270 (4%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R+ +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRGMIMDSYDWFVGIVQERRSFTHEQALALANGAVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS--- 270 TG +A LID +GG+ E L G+ + ++ +W P + L++L I + Sbjct: 227 TGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIHAGAR 285 Query: 271 ---LLEDTIPLMK-----QTKVQGLWAVWN 292 L ++ ++K + + GL +VW+ Sbjct: 286 LLGLPQEADGVIKEIARDRIFLDGLLSVWH 315 >gi|163842424|ref|YP_001626828.1| signal peptide peptidase SppA, 36K type [Brucella suis ATCC 23445] gi|189023406|ref|YP_001934174.1| Clp protease [Brucella abortus S19] gi|254690458|ref|ZP_05153712.1| signal peptide peptidase SppA [Brucella abortus bv. 6 str. 870] gi|254694947|ref|ZP_05156775.1| signal peptide peptidase SppA [Brucella abortus bv. 3 str. Tulya] gi|254696578|ref|ZP_05158406.1| signal peptide peptidase SppA [Brucella abortus bv. 2 str. 86/8/59] gi|254707153|ref|ZP_05168981.1| signal peptide peptidase SppA [Brucella pinnipedialis M163/99/10] gi|254709303|ref|ZP_05171114.1| signal peptide peptidase SppA [Brucella pinnipedialis B2/94] gi|254713274|ref|ZP_05175085.1| signal peptide peptidase SppA [Brucella ceti M644/93/1] gi|254716373|ref|ZP_05178184.1| signal peptide peptidase SppA [Brucella ceti M13/05/1] gi|254731491|ref|ZP_05190069.1| signal peptide peptidase SppA [Brucella abortus bv. 4 str. 292] gi|256030826|ref|ZP_05444440.1| signal peptide peptidase SppA [Brucella pinnipedialis M292/94/1] gi|256060296|ref|ZP_05450469.1| signal peptide peptidase SppA [Brucella neotomae 5K33] gi|256258714|ref|ZP_05464250.1| signal peptide peptidase SppA [Brucella abortus bv. 9 str. C68] gi|260169730|ref|ZP_05756541.1| signal peptide peptidase SppA [Brucella sp. F5/99] gi|260546428|ref|ZP_05822168.1| clp protease [Brucella abortus NCTC 8038] gi|260756010|ref|ZP_05868358.1| signal peptide peptidase SppA [Brucella abortus bv. 6 str. 870] gi|260759234|ref|ZP_05871582.1| signal peptide peptidase SppA [Brucella abortus bv. 4 str. 292] gi|260760956|ref|ZP_05873299.1| signal peptide peptidase SppA [Brucella abortus bv. 2 str. 86/8/59] gi|260885030|ref|ZP_05896644.1| signal peptide peptidase SppA [Brucella abortus bv. 9 str. C68] gi|261215286|ref|ZP_05929567.1| signal peptide peptidase SppA [Brucella abortus bv. 3 str. Tulya] gi|261218155|ref|ZP_05932436.1| signal peptide peptidase SppA [Brucella ceti M13/05/1] gi|261314631|ref|ZP_05953828.1| signal peptide peptidase SppA [Brucella pinnipedialis M163/99/10] gi|261316812|ref|ZP_05956009.1| signal peptide peptidase SppA [Brucella pinnipedialis B2/94] gi|261320997|ref|ZP_05960194.1| signal peptide peptidase SppA [Brucella ceti M644/93/1] gi|261324268|ref|ZP_05963465.1| signal peptide peptidase SppA [Brucella neotomae 5K33] gi|261759268|ref|ZP_06002977.1| clp protease [Brucella sp. F5/99] gi|265987881|ref|ZP_06100438.1| signal peptide peptidase SppA [Brucella pinnipedialis M292/94/1] gi|163673147|gb|ABY37258.1| signal peptide peptidase SppA, 36K type [Brucella suis ATCC 23445] gi|189018978|gb|ACD71700.1| Clp protease [Brucella abortus S19] gi|260096535|gb|EEW80411.1| clp protease [Brucella abortus NCTC 8038] gi|260669552|gb|EEX56492.1| signal peptide peptidase SppA [Brucella abortus bv. 4 str. 292] gi|260671388|gb|EEX58209.1| signal peptide peptidase SppA [Brucella abortus bv. 2 str. 86/8/59] gi|260676118|gb|EEX62939.1| signal peptide peptidase SppA [Brucella abortus bv. 6 str. 870] gi|260874558|gb|EEX81627.1| signal peptide peptidase SppA [Brucella abortus bv. 9 str. C68] gi|260916893|gb|EEX83754.1| signal peptide peptidase SppA [Brucella abortus bv. 3 str. Tulya] gi|260923244|gb|EEX89812.1| signal peptide peptidase SppA [Brucella ceti M13/05/1] gi|261293687|gb|EEX97183.1| signal peptide peptidase SppA [Brucella ceti M644/93/1] gi|261296035|gb|EEX99531.1| signal peptide peptidase SppA [Brucella pinnipedialis B2/94] gi|261300248|gb|EEY03745.1| signal peptide peptidase SppA [Brucella neotomae 5K33] gi|261303657|gb|EEY07154.1| signal peptide peptidase SppA [Brucella pinnipedialis M163/99/10] gi|261739252|gb|EEY27248.1| clp protease [Brucella sp. F5/99] gi|264660078|gb|EEZ30339.1| signal peptide peptidase SppA [Brucella pinnipedialis M292/94/1] Length = 327 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 315 >gi|260175077|ref|ZP_05761489.1| protease IV [Bacteroides sp. D2] gi|299147649|ref|ZP_07040713.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_23] gi|315923305|ref|ZP_07919545.1| conserved hypothetical protein [Bacteroides sp. D2] gi|298514436|gb|EFI38321.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_23] gi|313697180|gb|EFS34015.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 592 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 131/257 (50%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ +D A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYPSSATSEDGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ + N ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTDKIGLSYDVVKTNKFADFGNIMRPFNEDEKSLLQMMITEGYDTFVTRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+D +GG ++ A + + P K + Sbjct: 483 TKEAIEKIAEGRVWTGETAKELGLVDELGGIDKALDIAVAKAGIEGYTVVSY--PEKQDF 540 Query: 260 FCDLKNLSISSLLEDTI 276 L + ++ +E + Sbjct: 541 LSSLLDTKPTNYVESQL 557 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 28/256 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++S+VTL + + + V + + G + + Sbjct: 22 LFIISMVTLFGIMSASDTETIVKKNSVMMLDLNGTLVERTQEDPLGILSQLLGDGSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I++ +++ + + +S G S + + I A+ K + + Sbjct: 82 LDDILSSIQKAKENENIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQ 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 142 GLYYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIA 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLI 224 +E++P + + + S + VS SRNI D V +D R + E+ K GL Sbjct: 202 TEMSPANREQVTTFITSIWGQVTEGVSTSRNISVDSLNVYAD-RMLMFYPAEESVKCGLA 260 Query: 225 DVVGGQEEVWQSLYAL 240 D + + +V L L Sbjct: 261 DTLIYRNDVRNYLKKL 276 >gi|237713852|ref|ZP_04544333.1| protease IV [Bacteroides sp. D1] gi|262409239|ref|ZP_06085783.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_22] gi|294647614|ref|ZP_06725184.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CC 2a] gi|294810039|ref|ZP_06768712.1| signal peptide peptidase SppA, 67K type [Bacteroides xylanisolvens SD CC 1b] gi|298482326|ref|ZP_07000513.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D22] gi|229446008|gb|EEO51799.1| protease IV [Bacteroides sp. D1] gi|262352986|gb|EEZ02082.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_22] gi|292637046|gb|EFF55494.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CC 2a] gi|294442755|gb|EFG11549.1| signal peptide peptidase SppA, 67K type [Bacteroides xylanisolvens SD CC 1b] gi|295085355|emb|CBK66878.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Bacteroides xylanisolvens XB1A] gi|298271613|gb|EFI13187.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D22] Length = 592 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ D+ A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYPSSATSEDGIVGSKVIRDLRKLKDDNDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGIIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ + N ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTDKIGLSYDVVKTNKYADFGNIMRPFNEDERSLLQMMITEGYDTFVSRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AKK+GL+D +GG ++ A + + P K + Sbjct: 483 TKEAIEKIAEGRVWTGETAKKLGLVDELGGIDKALDIAVAKAGIEGYTVVSY--PAKQDF 540 Query: 260 FCDLKNLSISSLLEDTI 276 F L + ++ +E + Sbjct: 541 FSSLLDTKPTNYVESQL 557 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 28/256 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++S+VTL + + + V + + G + + Sbjct: 22 LFIISMVTLFGIMSASDTETIVKKNSVMMLDLNGTLVERTQEDPLGILSQLFGDESNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I++ +++ + + SS G S + + I A+ K + + Sbjct: 82 LDDILSSIQKAKENENIKGIYLQASSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQ 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 142 GLYYLSSAADKVLLNPKGMIEWRGIASAPLFYKDLLQKIGVEMQVFKVGTYKSAVEPFIA 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLI 224 +E++P + + + S + VS SRNIP D V +D R + E+ + G Sbjct: 202 TEMSPANREQVTAFITSIWGQVTEGVSASRNIPVDSLNVYAD-RMLMFYPSEESVRCGFA 260 Query: 225 DVVGGQEEVWQSLYAL 240 D + + +V L L Sbjct: 261 DTLIYRNDVRNYLKKL 276 >gi|157693342|ref|YP_001487804.1| peptidase [Bacillus pumilus SAFR-032] gi|157682100|gb|ABV63244.1| S49 family unassigned peptidase [Bacillus pumilus SAFR-032] Length = 333 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 17/263 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPG 77 + +A + I G I+D+ + ++ +E+ D S +++ ++SPG Sbjct: 53 GSGAGKIAVLEINGTIQDNGGASSLLGGEGYDHRAFLKELEKAKDDASVKGVLLRVNSPG 112 Query: 78 GSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I + +++VK +KP+ + MAAS GY +S + I A+ +L GS+GV+ Sbjct: 113 GGVYESAEIHKKLEEVKKAKKPIYVSMGSMAASGGYYVSTPAKKIFASPETLTGSLGVIM 172 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q D LG+ +++KS K SP ++ +MQ +VD+SY FV+++SE Sbjct: 173 QSLNYSKLADNLGIKYETIKSGKFKDIMSPNRDMTKDERDIMQSMVDNSYEGFVKVISEG 232 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + ++DGR++ G +AK GL+D +G E+ +++ + ++ + Sbjct: 233 RGMSKQDVKKIADGRVYDGTQAKSNGLVDELGYYEDAIKAMKKNEKGLKGATVISYS--Q 290 Query: 257 NYWFCDLKNLSISSLLEDTIPLM 279 ++ + L N+S S L + I + Sbjct: 291 SFGWNSLFNMSASKLFKSEIDFL 313 >gi|329957885|ref|ZP_08298360.1| signal peptide peptidase SppA [Bacteroides clarus YIT 12056] gi|328522762|gb|EGF49871.1| signal peptide peptidase SppA [Bacteroides clarus YIT 12056] Length = 588 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 130/245 (53%), Gaps = 13/245 (5%) Query: 32 EDNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I+ +S+++I+ + ++ D++ A+++ ++SPGGSA Sbjct: 300 DKSGNVIAVYYAYGEIDGGSSASTDEGINSEKVIKDLRKLKDDENVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+ A+ ++K KPVI + + AAS GY I+C ++ IVA T+L GSIG+ P Sbjct: 360 YGSEQIWYAVNQLKKEKPVIVSMGDYAASGGYYIACNADTIVAEPTTLTGSIGIFGMMPN 419 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K +KLGV+ VK++P + +N +MQ V+ Y F+ S+ R I Sbjct: 420 AKGLTEKLGVNFDVVKTNPYADFGNLTRPMNDGEKGLMQMYVNKGYELFLTRCSDGRGIS 479 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ ++ GR+WTG+ AK++GL+D +GG ++ + A + + P K + Sbjct: 480 MEELDKIAQGRVWTGSTAKELGLVDELGGLDKALEIAIAKAGVDAYTVMNY--PKKEGFL 537 Query: 261 CDLKN 265 L N Sbjct: 538 ESLMN 542 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 101/265 (38%), Gaps = 28/265 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 +S++ + + S S + V + + G + + + Sbjct: 22 LFFISILVVFSMVSSSESETQVRKNSVMMLDLNGTLTERSQENPLDFLMKEDYKTYGLDD 81 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ I + ++ + + +S G + E I A++ K I + Y Sbjct: 82 ILSSIRKAKENEDIKGIYIQATSLGAGFASLEEIRDALKDFKESGKFIVAYGDTYTQNLY 141 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEV 170 +S ++ ++ ++ G+ + K L+K+GV ++ K K+ PF +E+ Sbjct: 142 YLSSVADKVLLNPQGMLEWRGLAATPMFFKDLLEKIGVEMQIFKVGTYKSAVEPFISTEM 201 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLIDVV 227 +P + + + S + V+ESRN+ + +D R + E+ K GL+D + Sbjct: 202 SPANREQVNVYLSSIWGQITSSVAESRNLSVEALNKEAD-RMLMFYPAEESVKNGLVDTL 260 Query: 228 ---GGQEEVWQSLYALGVDQSIRKI 249 + +++ + D ++ + Sbjct: 261 IYKNDVRDYLKNMVGIDKDDNMPVL 285 >gi|51893930|ref|YP_076621.1| putative proteinase IV [Symbiobacterium thermophilum IAM 14863] gi|51857619|dbj|BAD41777.1| putative proteinase IV [Symbiobacterium thermophilum IAM 14863] Length = 312 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 22/275 (8%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQI------ 47 M+ +K+ ++++V L++ W S + VA + + G I Sbjct: 1 MKNTMKRWIAAGAIVAIVVLSLAVAFWQGTGREVGSPKGPSGGQVALVRVEGTIVSGEGS 60 Query: 48 --------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KP 98 S+ +++ ++R + D + A+++ ++SPGGS A I A+++V++ KP Sbjct: 61 GSLLSGAGAGSETIVKHLDRAAEDPAVKAVVLRVNSPGGSVVASWEIAEAVRRVQDAGKP 120 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ + E AAS GY IS ++ I+A+ ++ GSIGV+ Q + +K+G + KS Sbjct: 121 VVVSMGESAASGGYWISAGADRIIASPDTMTGSIGVILQVGNLSEVYEKVGYKTYTFKSG 180 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 P K SP E+ ++QD+VD +Y FV +V+E R + + ++DGRI TG +A Sbjct: 181 PFKDMGSPDREMTDAERDLLQDLVDETYEAFVPVVAEGRGMDEAQVRKIADGRILTGRKA 240 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++GL+D +G + Q L ++++ N Sbjct: 241 LELGLVDELGDLKRAVQVAAELAGLPGEPEVREMN 275 >gi|256158851|ref|ZP_05456708.1| Clp protease [Brucella ceti M490/95/1] gi|256254232|ref|ZP_05459768.1| Clp protease [Brucella ceti B1/94] gi|261221381|ref|ZP_05935662.1| signal peptide peptidase SppA [Brucella ceti B1/94] gi|265997342|ref|ZP_06109899.1| signal peptide peptidase SppA [Brucella ceti M490/95/1] gi|260919965|gb|EEX86618.1| signal peptide peptidase SppA [Brucella ceti B1/94] gi|262551810|gb|EEZ07800.1| signal peptide peptidase SppA [Brucella ceti M490/95/1] Length = 327 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 179/283 (63%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W P + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDSLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 315 >gi|254700963|ref|ZP_05162791.1| signal peptide peptidase SppA [Brucella suis bv. 5 str. 513] gi|261751481|ref|ZP_05995190.1| signal peptide peptidase SppA [Brucella suis bv. 5 str. 513] gi|261741234|gb|EEY29160.1| signal peptide peptidase SppA [Brucella suis bv. 5 str. 513] Length = 327 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 178/283 (62%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + + +W P + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPHL-EWKPVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 315 >gi|270294203|ref|ZP_06200405.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D20] gi|270275670|gb|EFA21530.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D20] Length = 589 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%) Query: 32 EDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I+ DS+++I+ + ++ D+ A+++ ++SPGGS Sbjct: 300 DKSGNVIAVYYAYGEIDGGSSSASSEEGIDSKKVIKDLRKLKDDEDVKAVVLRVNSPGGS 359 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 AY E I+ A+ ++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ +P Sbjct: 360 AYGSEQIWYAVSELKKEKPVIVSMGDYAASGGYYISCNADTIVAEPTTLTGSIGIFGMFP 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 K DK+GV+ VK++ +N +MQ V++ Y F+ S+ R I Sbjct: 420 NAKGLTDKIGVNFDVVKTNKYADFGMLTRPMNDGEKGLMQMYVNNGYDLFLTRCSDGRGI 479 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + ++ GR+WTG++AK++GL+D +GG ++ A + + P K + Sbjct: 480 SKEDLDKIAQGRVWTGSKAKELGLVDELGGLDKALDIAIAKAGVDAYTVMSY--PKKESF 537 Query: 260 FCDLKN 265 F L N Sbjct: 538 FESLMN 543 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 101/255 (39%), Gaps = 26/255 (10%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QELIERIE 58 + + + S S + + + + G + + +++ I+ Sbjct: 28 LVVFSMVSSSESETQVRKNSIMMLDLNGALAERSQDNPFDALMGDNYKTYGLDDILSSIK 87 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + +D + + +S G + E I A++ K I + + Y +S + Sbjct: 88 KAKENDDIKGIYIEATSLGAGFASREEIRNALKDFKESGKFIVAYGDSYSQGLYYLSSVA 147 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQ 176 + ++ +V G+ + K L K+GV ++ K K+ PF +E++P + Sbjct: 148 DKVLLNPQGMVEWRGLAATPMFFKDLLAKIGVEMQIFKVGTYKSAVEPFISTEMSPANRE 207 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLIDVVGGQEEV 233 + + S + V+ESR I D ++D R + E+ + GL+D + + +V Sbjct: 208 QIDAYLTSIWGQVTNDVAESRKISVDSLNAIAD-RMLMFYPAEESVQCGLVDTLIYKNDV 266 Query: 234 WQSLYAL-GVDQSIR 247 L A+ G+D+ R Sbjct: 267 RNYLKAMVGIDKDDR 281 >gi|307150266|ref|YP_003885650.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7822] gi|306980494|gb|ADN12375.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 7822] Length = 599 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 131/269 (48%), Gaps = 9/269 (3%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATA 68 ++L+ + + ++ +A + G+I D + + + +I +D + A Sbjct: 292 ISLSTYAEGLLNENQASTNQIAVVYADGEIVDGEGTVNNIGGERFAKELRKIRQDPNIKA 351 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ ++SPGGSA A E I R I + +KP++ + +AAS GY IS ++ I A +++ Sbjct: 352 VVLRVNSPGGSATASEIIGREIHLISQQKPIVVSMGNVAASGGYWISAGASHIFAEPSTI 411 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV ++ + GVS +K++ + + + + + + V Y+ Sbjct: 412 TGSIGVFGLLFNIQKIANDNGVSWDVIKTAKLADINTSTRPKTEQELAIYKRSVGQVYNL 471 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F+ VS+SRN+ +K ++ GR+W+G +AKK+GL+D +GG E Sbjct: 472 FIEKVSQSRNLSPEKVREIAQGRVWSGQDAKKIGLVDELGGLEAAIDYAAKQANLGKNWT 531 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 I+++ + + L+ L + + + P Sbjct: 532 IQEYPSRRTFESVILEKLFQTKIQDSLTP 560 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 105/278 (37%), Gaps = 15/278 (5%) Query: 21 TVVYFSWSSHVEDNSP----HVARIAIRGQIEDSQELIERIERISRDDSATALIVS---L 73 + + F S ++D P A + L+ +E+ S+D + + + Sbjct: 50 SFLVFDLSMQIKDTKPPSTLSQALQNDETVTMTLRSLLNVVEKASKDSRIMGIFIDGRGV 109 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL--VGS 131 + G A + +A++ + I Y ++ ++ +V + + Sbjct: 110 EADNGYATLS-EVRKALEDFRAAGKKIVFYDVDLDEKKYFLASVADQVVLNPMGMMELNG 168 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWF 189 IGV + + L K G+ ++ V+ K+ P+ +++P Q +++ + F Sbjct: 169 IGVQPMF--LAGALKKYGIGVQVVRVGEYKSAVEPYIRQDLSPANRLQTQVLLNDLWANF 226 Query: 190 VRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + VS SR I K ++D + + EA+K+GL+D V +EV L S Sbjct: 227 LTTVSSSRKISATKLQDIADNQGVLMPKEAEKLGLVDRVAYFDEVLADLKKQTGQTSADD 286 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + + L N + +S + + V G Sbjct: 287 KTFAQISLSTYAEGLLNENQASTNQIAVVYADGEIVDG 324 >gi|120601287|ref|YP_965687.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris DP4] gi|120561516|gb|ABM27260.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfovibrio vulgaris DP4] Length = 296 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 135/267 (50%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+ + + T + + P + + I G I D+++ +E + +++ Sbjct: 15 FIFGFLLIMVAVALFTGATATFRHLTDAGSFGGPRIGIVRIEGMIGDARKTLEWMRKLAE 74 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + ++V + SPGG+ + + A++++ KPV+ + +AAS G ++S + IV Sbjct: 75 DRTVRGVLVRVDSPGGAVAPSQELHDAVKRLAADKPVVVSMGSLAASGGLMVSTGATRIV 134 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ GSIGV + P V+ +DKLGV+ +++ S +K SPF ++ Q ++ Sbjct: 135 ANPATITGSIGVKMEMPNVQGLMDKLGVARQTLVSGDLKDAGSPFRAMSEAERAYFQSII 194 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 Y FV +++E RNIP +K +DGRI TG++A ++GL+D +G + L AL Sbjct: 195 MEMYGQFVSMIAEDRNIPVEKVRSFADGRILTGSQALELGLVDKLGSEAAAMDVLLALVD 254 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + + P + W ++ ++ Sbjct: 255 LKGEKPVFIEPPKERSWVREVLESALG 281 >gi|332827777|gb|EGK00512.1| signal peptide peptidase SppA, 67K type [Dysgonomonas gadei ATCC BAA-286] Length = 584 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 130/265 (49%), Gaps = 10/265 (3%) Query: 29 SHVEDNSPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A + G I D S+ ++ +E++ +D A++ ++SPGGSA Sbjct: 297 ENKSKSKDIIAILYAEGSITDGSGTDGITSKRFVKELEKLKDNDKVKAVVFRVNSPGGSA 356 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I++A+ +K +KPV+ + + AAS GY ISC ++ I+A +L GSIG+ +P Sbjct: 357 YASEQIWKAVTDLKEKKPVVVSMGDYAASGGYYISCNASKIIAQPNTLTGSIGIFGMFPN 416 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V+ K+G++ +VK++ + + ++Q+ ++ Y F+ S+ R I Sbjct: 417 VEGLTKKVGLTFDNVKTNKLADFGDLTRPMRDDEKAILQNYIERGYDLFLTRCSDGRGID 476 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + ++ GR+WTG +A K+GL+D +GG ++ + L + + P K +F Sbjct: 477 KNSLDSIAQGRVWTGNQALKIGLVDELGGIDKAIEEAAKLANLEDYSL--NSFPKKRDFF 534 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQ 285 + L + + Q Sbjct: 535 ESFLSDQKEELTTRAMKEYLGSDYQ 559 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 93/251 (37%), Gaps = 9/251 (3%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGE- 84 S VE+ +P +A + + + +++ I++ +D + +++ SA Sbjct: 55 LSERVEEENPLLAMLNQNSEPQIGLDDIVSSIKKAKENDKIKGI--YINAGAFSASGASL 112 Query: 85 -AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + + K I ++ Y +S ++ ++ + G+ + K Sbjct: 113 KEMRDQLVDFKESGKFIVAYSDVYTQGCYYLSSVADKLIMNPEGHLDLHGLSASPMFYKG 172 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 LDK+G+ ++ K K+ PF +++ + + + + +S SRNI Sbjct: 173 LLDKIGIEMQIFKVGTFKSAVEPFMLDKMSDANREQVSSYIGDMWSTITSEISASRNISV 232 Query: 202 DKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 +K V++D + GL+D + + V + L L K K+ Sbjct: 233 EKLNVITDSLALFKKSEVCVQDGLVDTLMYETGVREYLKTLLTGVEKAKDVRLASVKDMT 292 Query: 260 FCDLKNLSISS 270 +N S S Sbjct: 293 TVPFENKSKSK 303 >gi|291485382|dbj|BAI86457.1| signal peptide peptidase [Bacillus subtilis subsp. natto BEST195] Length = 335 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 136/266 (51%), Gaps = 18/266 (6%) Query: 35 SPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSA 80 S +A + + G I+D+ + ++ +ER D + +++ ++SPGG Sbjct: 57 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGV 116 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I + ++++K +KP+ + MAAS GY IS A++ I A +L GS+GV+ + Sbjct: 117 YESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISAAADKIFATPETLTGSLGVIMES 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 DKLG+S +++KS K SP E+ + +MQ +VD+SY FV ++S+ R+ Sbjct: 177 VNYSKLADKLGISFETIKSGAHKDIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRS 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++DGR++ G +AKK+ L+D +G ++ ++ D + + +++ Sbjct: 237 MSKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNASVISYE--ESF 294 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 L ++ + + + I + ++ Sbjct: 295 GLGSLFSMGANKMFKSEIDFLNMREI 320 >gi|154687074|ref|YP_001422235.1| hypothetical protein RBAM_026460 [Bacillus amyloliquefaciens FZB42] gi|154352925|gb|ABS75004.1| SppA [Bacillus amyloliquefaciens FZB42] Length = 335 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 136/266 (51%), Gaps = 18/266 (6%) Query: 35 SPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSA 80 +A + + G IED+ + ++++ER D S +++ ++SPGG Sbjct: 57 GSKIAVLEVDGTIEDNGGSAGLLSSGGYDHRSFLKQVERAKEDKSVKGIVLKINSPGGGV 116 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I + ++++K +KP+ + MAAS GY IS A++ I A+ +L GS+GV+ + Sbjct: 117 YESAEIHKKLEELKKETKKPIYVSMGSMAASGGYYISTAADKIYASPETLTGSLGVIMES 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 D+LG+ +++KS K SP ++ + ++MQ +V+ SY FV ++S+ R+ Sbjct: 177 VNYSKLADELGIKFETIKSGAHKDIMSPTRDMTKEERKIMQTMVNDSYEGFVNVISKGRH 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + ++DGR++ G +AKK+GL+D +G ++ ++ + + + + + Sbjct: 237 MSKADVKKIADGRVYDGRQAKKIGLVDDLGFYDDTISAMKKDHKNMKNASVITYE--EGF 294 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 L ++S + + + I + ++ Sbjct: 295 GLGSLFSMSAAKMFKSEIDFLNMKEL 320 >gi|303326177|ref|ZP_07356620.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. 3_1_syn3] gi|302864093|gb|EFL87024.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. 3_1_syn3] Length = 358 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 135/252 (53%), Gaps = 4/252 (1%) Query: 14 MLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 +L+LV + + FS + + +A + +RG I D + I +I R+ ++ Sbjct: 73 LLALVLIGLAVFSRDENGQGLLSGGDRLALVMVRGPIMDVAPTLAWIRKIERNPQVKGVL 132 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG A A + ++ A+ ++ ++P+ + MAAS G ++S A I A +++ G Sbjct: 133 LRVDSPGGGAAASQEVYDALARLARKRPLAVSMGSMAASGGLMVSMAGGRIFANPSTVTG 192 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV P ++ L K+GV +++ ++P K S ++P+ + V+ + FV Sbjct: 193 SIGVRMDIPQLQGLLGKIGVGQETLVTAPYKNAGSYLHPLSPEDRAYFEGVLKDMHEQFV 252 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +V++ R++P+++ L+ G+I+TG EA K+GL+D +GGQ+ + L + RK+ Sbjct: 253 DIVAKGRDMPHERAGGLASGKIFTGQEALKLGLVDELGGQDAALRWLAEQTGVPAERKLL 312 Query: 251 DWNPPKNYWFCD 262 P ++ W D Sbjct: 313 T-KPKESSWLAD 323 >gi|126656085|ref|ZP_01727469.1| Peptidase S49, SppA [Cyanothece sp. CCY0110] gi|126622365|gb|EAZ93071.1| Peptidase S49, SppA [Cyanothece sp. CCY0110] Length = 272 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 8/265 (3%) Query: 35 SPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +ARI I G I ++E ++ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 SKQIARIEITGAIASETRKYVLEALKTVKE-KKFPALLLRIDSPGGTVGDSQEIYEALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LQEKVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLERLLDKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K + E+ + ++Q+++D+SY FV V+E RN+ D +DGRI Sbjct: 129 KVIKSGPYKDILAFDRELTEEEQHILQEMIDTSYQQFVTTVAEGRNLDVDNVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 +TG +A ++G++D +G +E+ + L G++ + D PK+ L S Sbjct: 189 FTGQQALELGVVDRLGTEEDARRWAAELAGLNPDKAQCYDIEEPKSLLNRVLSRNQTKSK 248 Query: 272 LEDTIPLMK---QTKVQGLWAVWNP 293 L +I ++ +T Q LW ++ P Sbjct: 249 LRTSIDWLEFELKTNGQPLW-LYRP 272 >gi|121535672|ref|ZP_01667477.1| signal peptide peptidase SppA, 36K type [Thermosinus carboxydivorans Nor1] gi|121305776|gb|EAX46713.1| signal peptide peptidase SppA, 36K type [Thermosinus carboxydivorans Nor1] Length = 308 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 16/284 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-------------EDSQEL 53 + V++SLV + + VA I I G I + ++ Sbjct: 8 YVIAAVVLVSLVGAAFIIPGLKTKGAAAQGKVAVIYIDGVIIGGRGQSALLAEYGGTDDI 67 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGY 112 + ++ D + A+++ ++SPGGSA A + + ++K++ K V+T + ++AAS GY Sbjct: 68 MRQLHEARDDAAVRAVVLRINSPGGSAPASQEVGEEVKKLRAAGKIVVTSMGDVAASGGY 127 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ ++ I A ++ GSIGV Y + K+G+ + +KS P K SP + Sbjct: 128 WIAALTDKIYANPATMTGSIGVYIPYANWEELYRKIGIRQEKIKSGPHKDILSPERSMTG 187 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++Q +VD Y+ FV +V+E R + + L+DGRI+TG +AK++GL+D +G + Sbjct: 188 EERAIIQAMVDDMYNQFVAVVAEGRKMDPARVRQLADGRIYTGNQAKELGLVDELGNLYD 247 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 L + ++ ++ K+ + L +L +LLE + Sbjct: 248 AIDGAARLAGIKGKPQVIEYG--KHSPWDYLLSLRAPTLLEKVL 289 >gi|189466890|ref|ZP_03015675.1| hypothetical protein BACINT_03271 [Bacteroides intestinalis DSM 17393] gi|189435154|gb|EDV04139.1| hypothetical protein BACINT_03271 [Bacteroides intestinalis DSM 17393] Length = 589 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 137/257 (53%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G I+ +S+++I + ++ ++ A+++ ++SPGGS Sbjct: 300 DKSGNIVAVYYAYGAIDSGSSYADSENGINSEKVIRDLRKLKENEDVKAVVLRVNSPGGS 359 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+ E I+ A+ ++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ +P Sbjct: 360 AFGSEQIWYAVTELKKEKPVIVSMGDYAASGGYYISCNADSIVADPTTLTGSIGIFGMFP 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ +N +MQ++V+ Y FV+ +E R + Sbjct: 420 NVKGLTDKIGLSFDVVKTNTYSDFGMMGRALNDGEKALMQNMVNEGYELFVKRCAEGRGM 479 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D+ +++GR+WTGA+AK++GL+D +GG ++ + A + + P K + Sbjct: 480 TTDEIKKIAEGRVWTGAKAKELGLVDELGGLDKALEMAIAKAGLDAYTVMSY--PGKKSF 537 Query: 260 FCDLKNLSISSLLEDTI 276 F L + + ++ + Sbjct: 538 FETLMDTNPGRYIQSRM 554 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 107/277 (38%), Gaps = 30/277 (10%) Query: 1 MEFVLKKIKTRYV------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---- 50 +F L I V +S++ L + S S + V + +RG + + Sbjct: 5 FKFTLATITGIIVSCVVLFFVSILILFSMLSSSESETQVRKNSVMMLDMRGMLSERSQDN 64 Query: 51 ---------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +++ I++ +++ + + S G + E I +A+ K Sbjct: 65 PFDMFLSEDETTYGLDDILSSIQKAKDNENIKGIYLQAGSMGAGFASIEEIRKALADFKT 124 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + + + Y ++ ++ ++ +G G+ + K L K+GV ++ Sbjct: 125 SGKFVVAYGDQYSQRLYYLASVADKVILNPQGSIGWYGLASTPVFYKDLLSKIGVEMQVF 184 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--R 211 K K+ PF +E++P + + +D + + +SESR + +K +D Sbjct: 185 KVGTYKSAVEPFISTEMSPANREQVTVFLDGIWGQMLGDISESRGVSKEKLNEAADKMLM 244 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIR 247 + + + GL D + + +V L L G+D+ R Sbjct: 245 FYPAEDCVEYGLADTLIYKNDVRNYLKTLIGIDEDDR 281 >gi|160890040|ref|ZP_02071043.1| hypothetical protein BACUNI_02479 [Bacteroides uniformis ATCC 8492] gi|317481508|ref|ZP_07940572.1| signal peptide peptidase SppA [Bacteroides sp. 4_1_36] gi|156860428|gb|EDO53859.1| hypothetical protein BACUNI_02479 [Bacteroides uniformis ATCC 8492] gi|316902325|gb|EFV24215.1| signal peptide peptidase SppA [Bacteroides sp. 4_1_36] Length = 589 Score = 263 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 129/246 (52%), Gaps = 14/246 (5%) Query: 32 EDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I+ DS+++I+ + ++ D+ A+++ ++SPGGS Sbjct: 300 DKSGNVIAVYYAYGEIDGGSSSASSEEGIDSKKVIKDLRKLKDDEDVKAVVLRVNSPGGS 359 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 AY E I+ A+ ++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ +P Sbjct: 360 AYGSEQIWYAVSELKKEKPVIVSMGDYAASGGYYISCNADTIVAEPTTLTGSIGIFGMFP 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 K DK+GV+ VK++ +N +MQ V++ Y F+ S+ R I Sbjct: 420 NAKGLTDKIGVNFDVVKTNKYADFGMLTRPMNDGEKGLMQMYVNNGYDLFLTRCSDGRGI 479 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + ++ GR+WTG++AK++GL+D +GG ++ A + + P K + Sbjct: 480 SKEDLDKIAQGRVWTGSKAKELGLVDELGGLDKALDIAIAKAGVDAYTVMSY--PKKESF 537 Query: 260 FCDLKN 265 F L N Sbjct: 538 FESLMN 543 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 109/278 (39%), Gaps = 32/278 (11%) Query: 1 MEFVLKKIKTRYV------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---- 50 ++F I V +S++ + + S S + + + + G + + Sbjct: 5 LKFTFATITGIIVSVVVLVFISILVVFSMVSSSESETQVRKNSIMMLDLNGALAERSQDN 64 Query: 51 ---------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +++ I++ +D + + +S G + E I A++ K Sbjct: 65 PFDALMGDNYKTYGLDDILSSIKKAKENDDIKGIYIEATSLGAGFASREEIRNALKDFKE 124 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 I + + Y +S ++ ++ +V G+ + K L K+GV ++ Sbjct: 125 SGKFIVAYGDSYSQGLYYLSSIADKVLLNPQGMVEWRGLAATPMFFKDLLAKIGVEMQIF 184 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-- 211 K K+ PF +E++P + + + S + V+ESR I D ++D R Sbjct: 185 KVGTYKSAVEPFISTEMSPANREQIDAYLTSIWGQVTNDVAESRKISVDSLNAIAD-RML 243 Query: 212 -IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIR 247 + E+ + GL+D + + +V L A+ G+D+ R Sbjct: 244 MFYPAEESVQCGLVDTLIYKNDVRNYLKAMVGIDKDDR 281 >gi|218128954|ref|ZP_03457758.1| hypothetical protein BACEGG_00527 [Bacteroides eggerthii DSM 20697] gi|217988917|gb|EEC55234.1| hypothetical protein BACEGG_00527 [Bacteroides eggerthii DSM 20697] Length = 588 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 131/245 (53%), Gaps = 13/245 (5%) Query: 32 EDNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I+ +S+++I + ++ D++ A+++ ++SPGGSA Sbjct: 300 DKSGNVIAVYYAYGEIDGGSSASTEEGINSEKVIRDLRKLKDDENVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+ A++++K KPVI + + AAS GY I+C ++ IVA T+L GSIG+ P Sbjct: 360 YGSEQIWYAVEQLKKEKPVIVSMGDYAASGGYYIACNADTIVAEPTTLTGSIGIFGMMPN 419 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K +KLG++ VK++P + +N +MQ V++ Y F+ S+ R I Sbjct: 420 AKGLTEKLGLNFDVVKTNPYADFGNLTRPMNDGEKGLMQMYVNNGYKLFLTRCSDGRGIS 479 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ ++ GR+WTG+ AK++GL+D +GG ++ + A + + P K + Sbjct: 480 MEELDKIAQGRVWTGSTAKELGLVDELGGLDKALEIAVAKAGVDAYTVMNY--PKKEGFL 537 Query: 261 CDLKN 265 L N Sbjct: 538 ESLMN 542 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 101/265 (38%), Gaps = 28/265 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 +S++ + + S S + V + + G + + + Sbjct: 22 LFFISILVVFSMVSSSESETQVRKNSVMMLDLNGTLAERSQENPLDILMKDDYKTYGLDD 81 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ I + +++ + + +S + E I A++ K I + + Y Sbjct: 82 VLSSIRKAKENENIKGIYIQANSLSAGYASLEEIRHALKDFKESGKFIVAYGDSYTQSLY 141 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEV 170 +S ++ ++ ++ G+ + K L+K+GV ++ K K+ PF +E+ Sbjct: 142 YLSSIADKVMLNPQGMLEWRGLAANPMFFKDLLEKIGVEMQVFKVGTYKSAVEPFIATEM 201 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLIDVV 227 +P + + + S + ++ESRN+ + +D R + E+ K GL+D + Sbjct: 202 SPANREQVNVYLSSVWGQITGDIAESRNLSVEALNKEAD-RMLMFYPAEESVKNGLVDTL 260 Query: 228 ---GGQEEVWQSLYALGVDQSIRKI 249 + ++L + D + + Sbjct: 261 IYKNDVRDYLKTLVGIDKDDDMPVL 285 >gi|296332070|ref|ZP_06874534.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675535|ref|YP_003867207.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150841|gb|EFG91726.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413779|gb|ADM38898.1| signal peptide peptidase [Bacillus subtilis subsp. spizizenii str. W23] Length = 335 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 134/266 (50%), Gaps = 18/266 (6%) Query: 35 SPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSA 80 S +A + + G I+D+ + ++ +ER D + +++ ++SPGG Sbjct: 57 SSKIAVLEVSGTIQDNGDSSSLLGSDGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGV 116 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I + ++++K +KP+ + MAAS GY IS A++ I A +L GS+GV+ + Sbjct: 117 YESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMES 176 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 DKLG+S +++KS K SP + + +MQ +VD+SY F+ ++SE R Sbjct: 177 VNYSKLADKLGISFETIKSGAHKDIMSPSRVMTKEEKNIMQSMVDNSYEGFIDVISEGRG 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++DGR++ G +AKK+ L+D +G ++ ++ D + + +++ Sbjct: 237 MSKSEVKKIADGRVYDGRQAKKLNLVDELGFYDDTISAMKKDHKDLKNASVISYE--ESF 294 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 L ++ + + + I + ++ Sbjct: 295 GLGSLFSMGANKMFKSEIDFLNMREI 320 >gi|239828047|ref|YP_002950671.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. WCH70] gi|239808340|gb|ACS25405.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. WCH70] Length = 336 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 141/294 (47%), Gaps = 22/294 (7%) Query: 20 LTVVYFSWSSHVEDNSP---HVARIAIRGQIED--------------SQELIERIERISR 62 L +V +S V ++ + + + G I+D Q + IE+ Sbjct: 41 LALVQNEFSEEVLEDGDELQKIVVLEVNGVIQDVGDTGALFAAAGYDHQSFLRMIEQAKN 100 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNI 120 DD+ A+++ ++SPGG I + ++K +KP+ + MAAS GY IS A + Sbjct: 101 DDTVKAIVLRVNSPGGGVVESAEIHDQLLELKKETKKPIYVSMGSMAASGGYYISTAGDK 160 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A+ ++ GS+GV+ Q + K GV + ++KS P K +P ++ + +++Q Sbjct: 161 IFASPETITGSLGVIMQSLNYEGLAKKYGVELVTIKSGPYKDIMNPARKMTEEEKEILQQ 220 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA- 239 ++ +SY FV+++SE R++P + ++DGRI+ G +AK++ LID G ++ +L Sbjct: 221 LIRNSYEGFVKVISEGRHLPESEVRKIADGRIYDGRQAKQLKLIDEFGYLDDTIAALKKD 280 Query: 240 --LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 L Q ++ +++ + +N + + I L+ L ++ Sbjct: 281 HHLADAQVVKYTNEFSFGSLFQMAFNQNTTPKHEATELIKLLSNPSSPRLMYLY 334 >gi|257058310|ref|YP_003136198.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8802] gi|256588476|gb|ACU99362.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8802] Length = 272 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 +ARI I G I Q +++ ++ + +D AL++ + SPGG+ + I+ A+ Sbjct: 8 STRKQIARIEITGAIASETRQTVLKALKTV-KDKKFPALLLRIDSPGGTVADSQEIYEAL 66 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++++ ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+G+ Sbjct: 67 KELRKSVKIVASFGNISASGGVYIGVGAEYIVANPGTITGSIGVILRGNNLERLLDKVGI 126 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 S K +KS P K S E+ + ++Q+++D SY FV V++ RN+ +K +DG Sbjct: 127 SFKVIKSGPYKDILSFDRELTEEEQTILQEMIDVSYQQFVTTVAQGRNLSVEKVKSFADG 186 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 RI+TG +A ++G++D +G +E+ + L G+ + PK W L S Sbjct: 187 RIFTGQQALELGVVDRLGTEEDARRWAAELAGLKPDQAQCYTIEEPKPLWNRLLSRNQSS 246 Query: 270 SLLEDTIPLMK---QTKVQGLWAVWNP 293 L I +K T Q LW ++ P Sbjct: 247 KGLGTAIDWVKFELATNGQLLW-LYRP 272 >gi|167764531|ref|ZP_02436652.1| hypothetical protein BACSTE_02920 [Bacteroides stercoris ATCC 43183] gi|167697200|gb|EDS13779.1| hypothetical protein BACSTE_02920 [Bacteroides stercoris ATCC 43183] Length = 540 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 131/245 (53%), Gaps = 13/245 (5%) Query: 32 EDNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I+ +S+++I+ + ++ +++ A+++ ++SPGGSA Sbjct: 252 DKSGNVIAVYYAYGEIDGGSSASTDEGINSEKVIKDLRKLKDNENVKAVVLRVNSPGGSA 311 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+ A+ ++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 312 YGSEQIWYAVNQLKKEKPVIVSMGDYAASGGYYISCNADTIVAEPTTLTGSIGIFGMMPN 371 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K +KLGV+ VK++P + +N +MQ V++ Y F+ S+ R I Sbjct: 372 AKGLTEKLGVNFDVVKTNPYADFGNLTRPMNDGEKGLMQMYVNNGYELFLTRCSDGRGIS 431 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ ++ GR+WTG+ AK++GL+D +GG ++ + A + + P K + Sbjct: 432 MEELDKIAQGRVWTGSTAKELGLVDELGGLDKALEIAIAKAGVDAYTVMSY--PKKEGFL 489 Query: 261 CDLKN 265 L N Sbjct: 490 ESLMN 494 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 85/205 (41%), Gaps = 9/205 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ I++ ++ + + +S G + E I A++ K + + Sbjct: 32 DDILSSIKKAKENEDIKGIYIQATSLGAGFASLEEIRNALKDFKESGKFVVAYGDAYTQG 91 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y +S ++ ++ ++ G+ + K L+K+GV ++ K K+ PF + Sbjct: 92 LYYLSSVADKVLLNPQGMLEWRGLAATPMFFKDLLEKVGVEMQVFKVGTYKSAVEPFIST 151 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLID 225 E++ + + + S + V+ESRN+ + +D R + E+ K GL+D Sbjct: 152 EMSAANREQINVYLSSIWGQITSAVAESRNLSVEALNKEAD-RMLMFYPAEESVKNGLVD 210 Query: 226 VV---GGQEEVWQSLYALGVDQSIR 247 + + ++L + D ++ Sbjct: 211 TLIYKNDVRDYLKNLAGIDKDDNMP 235 >gi|282599624|ref|ZP_05971253.2| signal peptide peptidase SppA [Providencia rustigianii DSM 4541] gi|282567989|gb|EFB73524.1| signal peptide peptidase SppA [Providencia rustigianii DSM 4541] Length = 635 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 141/282 (50%), Gaps = 17/282 (6%) Query: 21 TVVYFSWSSHVEDNSP---HVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 ++ + +SS + + S ++A I ++G I D + + +I +D A Sbjct: 328 SISIYDYSSKIAETSNAAGNIAVIVVQGAIMDGPQTPGIAGGETIAAQIRDARLNDDIKA 387 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGGS A + I + K KPV+ + MAAS GY IS ++ I+A+ ++ Sbjct: 388 IVLRVNSPGGSVSASDLIRNELAAAKASGKPVVVSMGGMAASGGYWISTPADYIIASPST 447 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + L+ +GV V +SP+ S ++P+ MMQ +++ Y Sbjct: 448 LTGSIGIFGVINTFENSLESIGVYTDGVSTSPLADI-SLTKGISPEFADMMQITIENGYE 506 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LV++SRN + ++ GR+WTG +A +GL+D +G ++ L SI Sbjct: 507 TFIGLVAKSRNKTPAEIDKIAQGRVWTGQDALNIGLVDKLGDFDDAVNKAAELAKVDSIE 566 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 DW P+ F D L +S+ ++ +P + Q+ + A Sbjct: 567 L--DWMQPELS-FMDQLILELSNNVQVMMPDVLQSFLPPAVA 605 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 83/196 (42%), Gaps = 19/196 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + DD T +++ L + G+ I +AI++ K KPV + S Sbjct: 117 DIVDTIRTAADDDRITGMVLRLDNLAGADQPSIAYIGKAIEQFKASGKPVYAVGDSYSQS 176 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPY---VKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ ++ + A G++GV K L+KL VS + K+ P Sbjct: 177 -QYYLASFADDVFIAPH---GNVGVYGFSTNTLYYKSLLEKLKVSSHVFRVGTYKSAVEP 232 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGA 216 ++P+A + +++ + +++ ++++R + ++ I + Sbjct: 233 MMRDNMSPEAREANLLWLNTLWDNYLKALADNRQTKPVQIFPGAEQLITQLRAVKGDSAQ 292 Query: 217 EAKKVGLIDVVGGQEE 232 A + L+D + +E+ Sbjct: 293 YALQQKLVDKIYTREQ 308 >gi|147679177|ref|YP_001213392.1| periplasmic serine proteases [Pelotomaculum thermopropionicum SI] gi|146275274|dbj|BAF61023.1| Periplasmic serine proteases [Pelotomaculum thermopropionicum SI] Length = 310 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 15/261 (5%) Query: 40 RIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 I I G I S+++ + +R+ A+++ L+SPGG+A A + I Sbjct: 43 IIYIDGPITGGRGGGGLFETYTSSEQVTSALRNAARNPDLKAVVIRLNSPGGTAAAAQEI 102 Query: 87 FRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++++ ++ K V+ + + AAS Y I+ ++ IVA +L GSIGV+ QY ++ Sbjct: 103 SAEVERLKRSGKKVVASMGDSAASGAYWIAACADQIVANPGTLTGSIGVIIQYLNLEELY 162 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV ++ KS P K SP + + Q ++D Y+ FV +V+ R+ + Sbjct: 163 SKIGVDTETFKSGPHKDMGSPSRPATAEERAIFQSMIDDIYNQFVDVVARGRHKDPAEIR 222 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+DGRI+TG +AK++GL+D +G + L + + + P KN W Sbjct: 223 PLADGRIFTGRQAKELGLVDRLGDLHDAVLLAGELAGIKGEPAVVEIGP-KNIWQELFAG 281 Query: 266 LSISSLLEDTIPLMKQTKVQG 286 ++ + + + G Sbjct: 282 AGGNTFRKPGWLAIPGREGDG 302 >gi|317477481|ref|ZP_07936707.1| signal peptide peptidase SppA [Bacteroides eggerthii 1_2_48FAA] gi|316906345|gb|EFV28073.1| signal peptide peptidase SppA [Bacteroides eggerthii 1_2_48FAA] Length = 588 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 131/245 (53%), Gaps = 13/245 (5%) Query: 32 EDNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I+ +S+++I + ++ D++ A+++ ++SPGGSA Sbjct: 300 DKSGNVIAVYYAYGEIDGGSSASTEEGINSEKVIRDLRKLKDDENVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 Y E I+ A++++K KPVI + + AAS GY I+C ++ IVA T+L GSIG+ P Sbjct: 360 YGSEQIWYAVEQLKKEKPVIVSMGDYAASGGYYIACNADTIVAEPTTLTGSIGIFGMMPN 419 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K +KLG++ VK++P + +N +MQ V++ Y F+ S+ R I Sbjct: 420 AKGLTEKLGLNFDIVKTNPYADFGNLTRPMNDGEKGLMQMYVNNGYKLFLTRCSDGRGIS 479 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ ++ GR+WTG+ AK++GL+D +GG ++ + A + + P K + Sbjct: 480 MEELDKIAQGRVWTGSTAKELGLVDELGGLDKALEIAVAKAGVDTYTVMNY--PKKEGFL 537 Query: 261 CDLKN 265 L N Sbjct: 538 ESLMN 542 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 101/265 (38%), Gaps = 28/265 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 +S++ + + S S + V + + G + + + Sbjct: 22 LFFISILVVFSMVSSSESETQVRKNSVMMLDLNGTLAERSQENPLDILMKDDYKTYGLDD 81 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ I + +++ + + +S + E I A++ K I + + Y Sbjct: 82 VLSSIRKAKENENIKGIYIQANSLSAGYASLEEIRHALKDFKESGKFIVAYGDSYTQSLY 141 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEV 170 +S ++ ++ ++ G+ + K L+K+GV ++ K K+ PF +E+ Sbjct: 142 YLSSIADKVMLNPQGMLEWRGLAATPMFFKDLLEKIGVEMQVFKVGTYKSAVEPFIATEM 201 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLIDVV 227 +P + + + S + ++ESRN+ + +D R + E+ K GL+D + Sbjct: 202 SPANREQVNVYLSSVWGQITGDIAESRNLSVEALNKEAD-RMLMFYPAEESVKNGLVDTL 260 Query: 228 ---GGQEEVWQSLYALGVDQSIRKI 249 + ++L + D + + Sbjct: 261 IYKNDVRDYLKTLVGIDKDDDMPVL 285 >gi|293405264|ref|ZP_06649256.1| protease 4 [Escherichia coli FVEC1412] gi|298380907|ref|ZP_06990506.1| protease IV [Escherichia coli FVEC1302] gi|300898997|ref|ZP_07117286.1| signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|291427472|gb|EFF00499.1| protease 4 [Escherichia coli FVEC1412] gi|298278349|gb|EFI19863.1| protease IV [Escherichia coli FVEC1302] gi|300357394|gb|EFJ73264.1| signal peptide peptidase SppA [Escherichia coli MS 198-1] Length = 666 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + ++ KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARSAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|298529709|ref|ZP_07017112.1| signal peptide peptidase SppA, 36K type [Desulfonatronospira thiodismutans ASO3-1] gi|298511145|gb|EFI35048.1| signal peptide peptidase SppA, 36K type [Desulfonatronospira thiodismutans ASO3-1] Length = 296 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 3/277 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F I T V L + + P + + + G I DS+++++ I+ + Sbjct: 14 LIFGFMLIITAVVTFMLAMAVFNFLFFDGPKLRTQPKIGVVNVSGLITDSRDIVDWIQEL 73 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 DS +++ ++SPGG + +FRA++ + KPV+ + +AAS GY + + + Sbjct: 74 EEKDSVKGVLLRVNSPGGVVAPSQEVFRAVKDLAREKPVVASLGSVAASGGYYAASPAGV 133 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +L SIGV ++ L KLG+ + V S K + + + + Q Sbjct: 134 IVANPGTLTASIGVKVTLTNIQELLQKLGIEDQGVYSGEFKDAGTVSRPMTEEEREYFQG 193 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +VD + FV+ V+ +R++ + L+DGR TG +A + GL+D +GG+ E L Sbjct: 194 LVDDMHEQFVQDVALARDMDEQRVYDLADGRAMTGRQALEAGLVDELGGRSEALDILCE- 252 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 Q R K P+ + LS S L D IP Sbjct: 253 -KVQLPRDAKQLEGPEERMSILRRILSEFS-LGDNIP 287 >gi|15598169|ref|NP_251663.1| peptidase [Pseudomonas aeruginosa PAO1] gi|107102522|ref|ZP_01366440.1| hypothetical protein PaerPA_01003586 [Pseudomonas aeruginosa PACS2] gi|116050975|ref|YP_790200.1| putative peptidase [Pseudomonas aeruginosa UCBPP-PA14] gi|254235947|ref|ZP_04929270.1| hypothetical protein PACG_01902 [Pseudomonas aeruginosa C3719] gi|254241681|ref|ZP_04935003.1| hypothetical protein PA2G_02387 [Pseudomonas aeruginosa 2192] gi|296388534|ref|ZP_06878009.1| putative peptidase [Pseudomonas aeruginosa PAb1] gi|313108158|ref|ZP_07794293.1| putative peptidase [Pseudomonas aeruginosa 39016] gi|9949072|gb|AAG06361.1|AE004723_5 probable peptidase [Pseudomonas aeruginosa PAO1] gi|115586196|gb|ABJ12211.1| putative peptidase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167878|gb|EAZ53389.1| hypothetical protein PACG_01902 [Pseudomonas aeruginosa C3719] gi|126195059|gb|EAZ59122.1| hypothetical protein PA2G_02387 [Pseudomonas aeruginosa 2192] gi|310880795|gb|EFQ39389.1| putative peptidase [Pseudomonas aeruginosa 39016] Length = 326 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K T + ++ + S + H A I ++G I D + ++ + Sbjct: 40 IFFKSLTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALR 99 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D+ +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 100 AAFKDEGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV + S K+ PF P+ Sbjct: 160 SAADQIYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEET 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + L G +W+G +A ++GLID +G V Sbjct: 220 QFWQQVLDTTHKQFIDSVKKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLGNASYV 279 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + +KI+D+ ++ + K S Sbjct: 280 AREVV------KEKKIEDYTVQESPFDRFAKKFGAS 309 >gi|46581551|ref|YP_012359.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. Hildenborough] gi|46450973|gb|AAS97619.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. Hildenborough] gi|311235195|gb|ADP88049.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris RCH1] Length = 296 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 134/267 (50%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+ + + T + + P + + I G I D ++ +E + +++ Sbjct: 15 FIFGFLLIMVAVALFTGATATFRHLTDAGSFGGPRIGIVRIEGMIGDVRKTLEWMRKLAE 74 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D + ++V + SPGG+ + + A++++ KPV+ + +AAS G ++S + IV Sbjct: 75 DRTVRGVLVRVDSPGGAVAPSQELHDAVKRLAADKPVVVSMGSLAASGGLMVSTGATRIV 134 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ GSIGV + P V+ +DK+GV+ +++ S +K SPF ++ Q ++ Sbjct: 135 ANPATITGSIGVKMEMPNVQGLMDKIGVARQTLVSGDLKDAGSPFRAMSEAERAYFQSII 194 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 Y FV +++E RNIP +K +DGRI TG++A ++GL+D +G + L AL Sbjct: 195 MEMYGQFVSMIAEDRNIPVEKVRSFADGRILTGSQALELGLVDKLGSEAAAMDVLLALVD 254 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + + P + W ++ ++ Sbjct: 255 LKGEKPVFIEPPKERSWVREVLESALG 281 >gi|163783733|ref|ZP_02178719.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] gi|159880979|gb|EDP74497.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] Length = 264 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 5/240 (2%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 VA I I+G I + + +IER+ +D S AL++ + SPGGS A + I+RAI++ K Sbjct: 12 GERVAIINIKGVIVNPIPTVRKIERLRKDKSVKALVIRVDSPGGSVGASQEIYRAIERFK 71 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPV+ + +AAS GY +S ++ I+A ++ GSIGV+ Q+ + ++K+GV Sbjct: 72 AEGKPVVVSMGNVAASGGYYVSAPADYILANPGTITGSIGVIIQHVAYRELMEKIGVKAT 131 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGR 211 ++K+ K +PF E+ P+ + +Q+ + +Y F++ + + R I +K ++DGR Sbjct: 132 AIKTGKFKDTLNPFRELTPEEKEYLQETIGEAYEQFLKAILKYRGNKIGEEKLRSVADGR 191 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + TG AK++GL+D +GG E+ Q + R+ + P + + I L Sbjct: 192 VLTGERAKELGLVDELGGIEDAVQKAKEIAGVPKAREF--FVPEEKSLLQKVLGGEIEEL 249 >gi|313204613|ref|YP_004043270.1| signal peptide peptidase a [Paludibacter propionicigenes WB4] gi|312443929|gb|ADQ80285.1| signal peptide peptidase A [Paludibacter propionicigenes WB4] Length = 587 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 154/282 (54%), Gaps = 17/282 (6%) Query: 20 LTVVYFSWSSHVEDNSPH----VARIAIRGQIEDSQ-------ELIERIERISRDDSATA 68 L V S S + DNS + VA I G+I D++ ++++ I +++D + A Sbjct: 288 LVFVKNSAMSKLPDNSKYDKNKVAVIYAIGEITDTEGDEIVARDMVKTINDVAKDSAVKA 347 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ +SSPGGSAYA E I+ A+ +K +KP+I + + AAS GY ISC ++ I+A ++ Sbjct: 348 VVLRVSSPGGSAYASEQIWHALSMLKAKKPLIVSMGDYAASGGYYISCLADKIIAQPNTI 407 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ P +K +KLG++ VK++ M S P+ +MQ+ V+ Y Sbjct: 408 TGSIGIFGAIPNIKGLNEKLGLTYDGVKTNKMSDGISINRSFTPEERDLMQNYVNRGYEL 467 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV+ ++ R + ++ +++GR+WTG +A K+GL+D +GG + + L VD++ K Sbjct: 468 FVKRCAQGRKMKVEQIKAIAEGRVWTGEDAIKIGLVDKIGGLNDAIK----LAVDKA--K 521 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 + +N + D + SL ED + + ++ +++ Sbjct: 522 LSSYNLKEYPEKEDFTAKLLKSLTEDVEARVMEAQLGEQYSI 563 Score = 79.4 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 109/267 (40%), Gaps = 34/267 (12%) Query: 1 MEFVLKKIKTRYV--MLSLVTLTVVYFSWSSHVEDN----SPHVARIAIRGQIEDS---- 50 ++F L I ++ +L ++ +V + +S E S + + + G + D Sbjct: 5 LKFTLASIVGIFITSLLGVLIFFIVLGAAASSGEKTTVLKSNSIYELDLEGSLVDRSEDN 64 Query: 51 --------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 E+++ IE+ DD+ + + S G + + I A+ Sbjct: 65 PFSNVLGKALGSSSENSLGLDEVLKNIEKAKNDDNIVGIYLKGGSLSGGIASVKEIRNAL 124 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 K I + + Y + +N I+ ++ G+ + ++K LDKLG+ Sbjct: 125 IDFKKSGKFIVAYADNYSQKMYYLVSVANKILINPQGMLELKGLSTETMFLKNTLDKLGI 184 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 ++ VK K+ P+ ++++ + ++S ++ ++ +S SR IP +K + Sbjct: 185 EMQIVKVGTFKSAVEPYILTKMSDANRLQVNVFLNSIWNTILKEISASRKIPTEKLNSYA 244 Query: 209 DGRIWT--GAEAKKVGLIDVVGGQEEV 233 D + ++K+ L+D + ++V Sbjct: 245 DEMMMYQPTEKSKQYNLVDSLVYADQV 271 >gi|296134407|ref|YP_003641654.1| signal peptide peptidase SppA, 36K type [Thermincola sp. JR] gi|296032985|gb|ADG83753.1| signal peptide peptidase SppA, 36K type [Thermincola potens JR] Length = 315 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 149/301 (49%), Gaps = 20/301 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVED--NSPH----VARIAIRGQI------------ 47 KK+ ++ + V+ + + + P + I+I G I Sbjct: 3 KKLVVGIILGICILSLVIALAVEPGEKPLISGPKYDNAIGLISIEGPITGGDVGGLFEVS 62 Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 ++ ++E++ ++D S A+I+ ++SPGG+ A + I ++KV+ K V+ + ++ Sbjct: 63 AGAESIMEQLREAAKDKSLKAVIIRINSPGGTVAASQEIGEEVEKVRKAGKKVVISMGDV 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+ + IVA ++ GSIGV+ + + +K+G++ +S+KS K SP Sbjct: 123 AASGGYWIAAKGDKIVANPGTVTGSIGVIMESLNMSDLYNKVGIADQSIKSGAHKDMGSP 182 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + + ++Q +VD ++ FV +V++ R + + L ++DGR++TG +AK +GL+D Sbjct: 183 SRPLTQEEKVILQSMVDDMFNQFVDVVAKGRRMKREDVLKIADGRVFTGRQAKSLGLVDE 242 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 +G + + L + ++ + P K+ W +S + D ++K + + Sbjct: 243 LGNYYDAVRLTAKLAGIKGEPEVVELKP-KDPWASFFGKAMLSFGIRDYEGILKAAETRD 301 Query: 287 L 287 L Sbjct: 302 L 302 >gi|218890829|ref|YP_002439693.1| putative peptidase [Pseudomonas aeruginosa LESB58] gi|218771052|emb|CAW26817.1| probable peptidase [Pseudomonas aeruginosa LESB58] Length = 326 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K T + ++ + S + H A I ++G I D + ++ + Sbjct: 40 IFFKSLTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALR 99 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D+ +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 100 AAFKDEGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV + S K+ PF P+ Sbjct: 160 SAADQIYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEET 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + L G +W+G +A ++GLID +G V Sbjct: 220 QFWQQVLDTTHKQFIDSVKKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLGNASYV 279 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + +KI+D+ ++ + K S Sbjct: 280 AREVV------KEKKIEDYTVQESPFDRFAKKFGAS 309 >gi|152985915|ref|YP_001347560.1| putative peptidase [Pseudomonas aeruginosa PA7] gi|150961073|gb|ABR83098.1| probable peptidase [Pseudomonas aeruginosa PA7] Length = 326 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K T + ++ + S H A I ++G I D + ++ + Sbjct: 40 IFFKSLTFLYLFVVLLAFSPFASLEKSASRGGSHTALIEVKGMIADDEPASADNIVTALR 99 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D+ +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 100 AAFEDEGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV L+KLGV + S K+ PF P+ Sbjct: 160 SAADQIYADKASLVGSIGVTAASFGFVGTLEKLGVERRVYTSGEHKSFLDPFQPQKPEET 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + D L G +W+G +A ++GLID +G V Sbjct: 220 QFWQQVLDTTHKQFIDSVKKGRGDRLKVDGHPELFSGLVWSGEQALQLGLIDGLGNASYV 279 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + +KI+D+ ++ + K S Sbjct: 280 AREVV------KEKKIEDYTVQESPFDRFAKKFGAS 309 >gi|283785012|ref|YP_003364877.1| protease IV [Citrobacter rodentium ICC168] gi|282948466|emb|CBG88055.1| protease IV [Citrobacter rodentium ICC168] Length = 618 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S + D VA + G I D +E +I D A++ Sbjct: 310 AISYYDYSLNTPADTGSSVAVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ Q+MQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDSIGVHTDGVATSPLADI-SMTKALPPEVQQIMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ESR ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 489 ITLVAESRKSTPEQVDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHI 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + +++ + ++S S ++L I M + Sbjct: 548 DYYQSEPSFFDMVMDSMSGSVRAMLPQAIQAMLPAPL 584 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 88/222 (39%), Gaps = 25/222 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T +++ L G+ + I +A+++ ++ KPV + + + Sbjct: 99 DIVNTIRQAKDDSNITGIVMDLKDFAGADQPSMQYIGKALREFRDSGKPVYA-IGDNFSQ 157 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ +N I GS+ G Y K LDKL VS + K+ P Sbjct: 158 GQYYLASFANKIWLTPQ---GSVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEP 214 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW---------TG 215 F +++P A + + + ++ ++ +R I + + G + T Sbjct: 215 FIRDDMSPAAREADSRWIGELWQNYLNTIAANRQITAQQVFPGAQG-VLDGLTKVGGDTA 273 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 A L+D + E+ ++L D + R I ++ Sbjct: 274 KYALDHKLVDALLSSSEMEKALSKAFGWSKSDNNYRAISYYD 315 >gi|49083774|gb|AAT51140.1| PA2973 [synthetic construct] Length = 327 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K T + ++ + S + H A I ++G I D + ++ + Sbjct: 40 IFFKSLTFIYLFVVLLAFSPFGSLEKSASRSGSHTALIEVKGMIADDEPASADNIVTALR 99 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D+ +++ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 100 AAFKDEGTKGIVLRINSPGGSPVQSGYIYDEIRRLRGEHPNVKVYAVISDLGASGAYYIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV + S K+ PF P+ Sbjct: 160 SAADQIYADKASLVGSIGVTAASFGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEET 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + L G +W+G +A ++GLID +G V Sbjct: 220 QFWQQVLDTTHKQFIDSVEKGRGDRLKVEGHPELFSGLVWSGEQALQLGLIDGLGNASYV 279 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + +KI+D+ ++ + K S Sbjct: 280 AREVV------KEKKIEDYTVQESPFDRFAKKFGAS 309 >gi|308270374|emb|CBX26986.1| Putative protease slr0021 [uncultured Desulfobacterium sp.] Length = 297 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 2/276 (0%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVED--NSPHVARIAIRGQIEDSQELIERIERI 60 F+ + + + + + + D V + I G I +S+E+I I++ Sbjct: 8 FLFSVLVFSSIFFATILGVSILVFLGTRDPDFNMGEKVGVVEISGIITESKEIIRNIKKY 67 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 DDS A+I+ + SPGG+ + IFR +K K +I + AAS GY I+ +N Sbjct: 68 REDDSIKAIILRIDSPGGAVGPSQEIFRETRKTIGIKKIIASMGTAAASGGYYIAAGTNG 127 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A ++ GSIGV+ + + L K+G+ VKS K SP ++ K +++Q Sbjct: 128 IMANPGTITGSIGVIIGFTNFEEILQKIGLYSVVVKSGEYKDIGSPVRKMTEKEKKLLQT 187 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 VD+++ FV VS+ RN+ K ++DGRI+TG AK +GL+D +G E+ + L Sbjct: 188 FVDNTHMQFVDAVSKGRNMDIAKVKAIADGRIFTGEMAKNLGLVDRLGNLEDAIEWAGRL 247 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 G + + + S ++ + Sbjct: 248 GGIKGKISAVYSKKSDSSFLDYFVESSAKKIVSHVV 283 >gi|322420579|ref|YP_004199802.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M18] gi|320126966|gb|ADW14526.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M18] Length = 293 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 127/260 (48%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 +++ + V V + ++G I D QE+I ++ + +D+ A++ Sbjct: 16 FLLFAACVAVVTALIGDRDGLAGGTGVGLVELKGVIVDGQEIIRQLRELRKDEDVKAVVF 75 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG + I+ A++ + K V+ + +AAS GY +S + +I A ++ GS Sbjct: 76 RVDSPGGVVGPSQEIYAAVKDLAKVKKVVVSMGSVAASGGYYVSAPATLIYANPGTITGS 135 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGVL ++ ++ +DK+G+ ++K+ K SP + + M+Q V+DS++ FV+ Sbjct: 136 IGVLMKFSNIEGLMDKVGMKAFTIKTGKFKDTGSPARSMTGEERAMLQGVIDSTHGQFVQ 195 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V++ R +P ++ ++DGRI++G +A + L+D +G ++ L + ++ Sbjct: 196 AVAQGRKLPVEQVRGIADGRIFSGEQALALKLVDRIGSLQDAVDEAGRLAGIKGEPRLIK 255 Query: 252 WNPPKNYWFCDLKNLSISSL 271 K L + L Sbjct: 256 PPKKKGQVLDLLVEGAAQRL 275 >gi|330815967|ref|YP_004359672.1| Peptidase, U7 family protein [Burkholderia gladioli BSR3] gi|327368360|gb|AEA59716.1| Peptidase, U7 family protein [Burkholderia gladioli BSR3] Length = 338 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 11/280 (3%) Query: 7 KIKTRYV-MLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R++ ++ V L F +S + +S H A + I G+I +++++ ++ Sbjct: 54 RIAFRFLWLIVFVVLVFALFDFSGDGKLSSSRHTALVTIDGEIAAGTNANAEDINSALDD 113 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 114 AFEDSGTVGVVLRINSPGGSPVQAGIVYDEIRRLRKKYPSKPLYVVVSDMCASGGYYIAS 173 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLGV + S K PFS PK + Sbjct: 174 AADKIYVNQASIVGSIGVLMDGFGFTGLMDKLGVQRRLHTSGENKGFFDPFSPETPKMDE 233 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 234 HAQAMLDEIHAQFIQAVKDGRGKRLHESPEIFSGLFWTGAKSVELGLADGFGTTDTVARD 293 Query: 237 -LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 L A + K N + + ++ S L ++ Sbjct: 294 VLKAPDIVDYTVKESLSNRVARRFGAAIGGGAVKSALSES 333 >gi|52081444|ref|YP_080235.1| signal peptide peptidase [Bacillus licheniformis ATCC 14580] gi|52786819|ref|YP_092648.1| hypothetical protein BLi03092 [Bacillus licheniformis ATCC 14580] gi|319647352|ref|ZP_08001574.1| SppA protein [Bacillus sp. BT1B_CT2] gi|52004655|gb|AAU24597.1| signal peptide peptidase [Bacillus licheniformis ATCC 14580] gi|52349321|gb|AAU41955.1| SppA [Bacillus licheniformis ATCC 14580] gi|317390699|gb|EFV71504.1| SppA protein [Bacillus sp. BT1B_CT2] Length = 335 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 133/264 (50%), Gaps = 18/264 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPG 77 ++S +A + + G I D+ + ++ +E+ D + +++ ++SPG Sbjct: 54 GNSSRKIAVLEVNGTISDNGGASGLFSSEGYNHRSFLQMLEKAKDDSAVKGIVLRVNSPG 113 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G Y I + ++++K +KP+ + MAAS GY IS ++ I AA +L GS+GV+ Sbjct: 114 GGVYESAEIHKKLEEIKKDTKKPIYVSMGSMAASGGYYISTPADKIFAAPDTLTGSLGVI 173 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + +KLG+ +++KS K SP ++ K ++MQ +VD +Y FV +++E Sbjct: 174 MESLNYSKLAEKLGLKTETIKSGEFKDIMSPTRDMTKKEREIMQSMVDDAYEGFVDVIAE 233 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + + ++DGR++ G +AK+ LID +G E+ +++ + + + + Sbjct: 234 GRGMSENDVKKIADGRVYDGRQAKQNHLIDELGYYEDAVKAMKKDHKNLAGASVVSYE-- 291 Query: 256 KNYWFCDLKNLSISSLLEDTIPLM 279 ++ L +++ + + + + Sbjct: 292 ESAGLASLFSMTANKMFKSEADFL 315 >gi|260567208|ref|ZP_05837678.1| clp protease [Brucella suis bv. 4 str. 40] gi|260156726|gb|EEW91806.1| clp protease [Brucella suis bv. 4 str. 40] Length = 327 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 106/283 (37%), Positives = 178/283 (62%), Gaps = 13/283 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPGG+ Sbjct: 35 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPGGTT 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 GEAI+ A++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP Sbjct: 94 VGGEAIYDAVRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPD 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LGV ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R Sbjct: 154 LSKLLDTLGVKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFT 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ L L++G ++TG +A LID +GG+ E L G+ + ++ +W + Sbjct: 214 HEQALALANGAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKLVGSETG 272 Query: 261 CDLKNLSISS------LLEDTIPLMK-----QTKVQGLWAVWN 292 L++L I + L ++ +K + + GL +VW+ Sbjct: 273 FSLRDLIIHAGARLLGLPQEADGAIKEIVRDRIFLDGLLSVWH 315 >gi|218245277|ref|YP_002370648.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8801] gi|218165755|gb|ACK64492.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 8801] Length = 272 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 +ARI I G I Q +++ ++ + +D AL++ + SPGG+ + I+ A+ Sbjct: 8 STRKQIARIEITGAIASETRQTVLKALKTV-KDKKFPALLLRIDSPGGTVADSQEIYEAL 66 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++++ ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+G+ Sbjct: 67 KELRKSVKIVASFGNISASGGVYIGVGAEYIVANPGTITGSIGVILRGNNLERLLDKVGI 126 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 S K +KS P K S E+ + ++Q+++D SY FV V++ RN+ +K +DG Sbjct: 127 SFKVIKSGPYKDILSFDRELTQEEQTILQEMIDVSYQQFVTTVAQGRNLSVEKVKSFADG 186 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 RI+TG +A ++G++D +G +E+ + L G+ + PK W L S Sbjct: 187 RIFTGQQALELGVVDRLGTEEDARRWAAELAGLKPDQAQCYTIEEPKPLWNRLLSRNQSS 246 Query: 270 SLLEDTIPLMK---QTKVQGLWAVWNP 293 L I +K T Q LW ++ P Sbjct: 247 KGLGTAIDWVKFELATNGQLLW-LYRP 272 >gi|187250455|ref|YP_001874937.1| signal peptide peptidase SppA, 36K type [Elusimicrobium minutum Pei191] gi|186970615|gb|ACC97600.1| Signal peptide peptidase SppA, 36K type [Elusimicrobium minutum Pei191] Length = 371 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 86/275 (31%), Positives = 138/275 (50%), Gaps = 13/275 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSP 76 SS VA I IRG I + Q + RI + D+ A+I+ ++SP Sbjct: 95 LSSQARHGETGVAVIRIRGVITEPQASSWRDQSASSIARRIRTTADKDNVKAIIIDINSP 154 Query: 77 GGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG+ A + I+ AI + K V+ +++AS GY I+ A + IVA +L GSIGV Sbjct: 155 GGTVAAVQDIYNAILYARQVKNKKVVALFRDVSASGGYYIAVACDKIVAQPGTLTGSIGV 214 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 +FQ + ++K+GVS ++KS K SP+ ++ + ++Q+++D SY+ F+ +V Sbjct: 215 IFQTGNFEGLMNKIGVSFSTIKSGQHKDIGSPYRKMTEEERTLLQELIDDSYNQFLDVVK 274 Query: 195 ESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 R N+ + V +DGRI+TG +A +GLID +GG+EE + L + + I + Sbjct: 275 TGRPNMNPVELKVYADGRIFTGRKAFSIGLIDALGGEEEALKIAGELADIKDPKIISNRP 334 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 W L S L+ I + KV LW Sbjct: 335 TTFREWLSSLDPEMSSKTLDRQIEAISSPKVAYLW 369 >gi|172038284|ref|YP_001804785.1| protease IV, 36K short form [Cyanothece sp. ATCC 51142] gi|171699738|gb|ACB52719.1| protease IV, 36K short form [Cyanothece sp. ATCC 51142] Length = 272 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 139/265 (52%), Gaps = 8/265 (3%) Query: 35 SPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +ARI I G I ++E + + AL++ + SPGG+ + I+ A+++ Sbjct: 10 SKQIARIEITGAIASETRKYVLEALNTVKE-KKFPALLLRIDSPGGTVGDSQEIYEALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LQDKVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLERLLDKIGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K + E+ + ++Q+++D+SY FV V++ RN+ +K +DGRI Sbjct: 129 KVIKSGPYKDILAFDRELTEEEHHILQEMIDTSYQQFVTTVAQGRNLDVNKVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 +TG +A ++G++D +G +E+ + L G++ + D PK+ L S Sbjct: 189 FTGQQALELGVVDRLGTEEDARRWAAELAGLNPDKAQCYDIEEPKSLLNRVLSRNQSKSK 248 Query: 272 LE---DTIPLMKQTKVQGLWAVWNP 293 L+ D + +T Q LW ++ P Sbjct: 249 LKTSMDWLEFELKTNGQPLW-LYRP 272 >gi|241662586|ref|YP_002980946.1| peptidase S49 [Ralstonia pickettii 12D] gi|309781168|ref|ZP_07675905.1| signal peptide peptidase SppA, 36K type [Ralstonia sp. 5_7_47FAA] gi|240864613|gb|ACS62274.1| peptidase S49 [Ralstonia pickettii 12D] gi|308919989|gb|EFP65649.1| signal peptide peptidase SppA, 36K type [Ralstonia sp. 5_7_47FAA] Length = 364 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L L+ + + F S H A + + G+I ++ + ++ Sbjct: 78 RIFFRFVALGLIGVLIYAFASLEGETVSTGRHTAIVTLEGEIAANTNASAENINASLQAA 137 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 138 FADDNTVGVILKINSPGGSPVQAGMINDEIRRLRAKYKKIPLYVVVEEMCASGGYYVAAA 197 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V+P+ Q Sbjct: 198 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGSNKGMLDPFSPVSPQQKQY 257 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q+++D + F+ +V + R L G WTGA+A +GL D +G + V +S+ Sbjct: 258 AQEMLDQVHQQFIDVVKQGRGNRLKDDPTLFTGLFWTGAKAVDLGLADAIGSSDFVARSV 317 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + L + L +++ L Sbjct: 318 I------KAPDVVDYTVKENFASRVARKLGTAMGAGAVKALATTGQLKLLM 362 >gi|46907816|ref|YP_014205.1| U7 family peptidase [Listeria monocytogenes serotype 4b str. F2365] gi|46881085|gb|AAT04382.1| peptidase, U7 family [Listeria monocytogenes serotype 4b str. F2365] Length = 337 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLADATVIQYDTPE 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 NFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|311069439|ref|YP_003974362.1| signal peptide peptidase [Bacillus atrophaeus 1942] gi|310869956|gb|ADP33431.1| signal peptide peptidase [Bacillus atrophaeus 1942] Length = 334 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 135/266 (50%), Gaps = 18/266 (6%) Query: 35 SPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSA 80 S +A + + G I+D+ + ++ +E+ D + +++ ++SPGG Sbjct: 56 SSKIAVLEVSGTIQDNGDSSSLLGSDGYNHRTFLKNLEQAKEDKTVKGIVLKVNSPGGGV 115 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y I + ++++K +KP+ + MAAS GY IS ++ I A+ ++ GS+GV+ + Sbjct: 116 YESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISADADKIYASPETITGSLGVIMES 175 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 D+LG+ +++KS K S ++ + ++MQ +VD+SY FV ++S+ RN Sbjct: 176 VNYSKLADELGIKFETIKSGAHKDIMSATRDMTDEEKKIMQSMVDNSYEGFVDVISKGRN 235 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++DGR++ G +AKK+ L+D +G ++ ++ + + + +++ Sbjct: 236 MSEAEVKKIADGRVYDGKQAKKLNLVDELGFYDDTIAAMKKDHKNLKDASVVTYE--ESF 293 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 L ++ + + + I + ++ Sbjct: 294 GLGSLFSMGANKMFKSEIDFLNMKEL 319 >gi|86157946|ref|YP_464731.1| signal peptide peptidase A [Anaeromyxobacter dehalogenans 2CP-C] gi|85774457|gb|ABC81294.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Anaeromyxobacter dehalogenans 2CP-C] Length = 316 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 131/235 (55%), Gaps = 7/235 (2%) Query: 34 NSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + P V I ++G I ++++++++RI R + D A+++ + SPGGS A + I Sbjct: 48 SGPRVGVIDVKGTIGGGPERDETEDILKRIRRFADDGDLKAVVIRVDSPGGSVGASQEIH 107 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++++ +K V+ + +AAS G +S A IVA +L GSIGV+ Q+P VK +K Sbjct: 108 DEVKRLAQKKVVVCSMGNLAASGGLYVSVACPKIVANPGTLTGSIGVISQFPNVKDLAEK 167 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LGV +++VK+ +K +PF ++ P+ Q +V+++ FV+ V+E R + K + Sbjct: 168 LGVKVETVKTGKLKDAGNPFRDMTPEDRAYWQGLVENTLGQFVKAVAEGRKLDEAKVRAI 227 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 +DGR+ TGA+AK+ GL+D +G + L S + + P ++ F + Sbjct: 228 ADGRVLTGAQAKEAGLVDQLGNFYDAV-ELAKQEAKLSGEPVLVYPPDEHGRFLE 281 >gi|284053546|ref|ZP_06383756.1| signal peptide peptidase A [Arthrospira platensis str. Paraca] gi|291569284|dbj|BAI91556.1| protease IV [Arthrospira platensis NIES-39] Length = 602 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 129/260 (49%), Gaps = 10/260 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 SW+ + ++ +A + G+I D E + R+ +D +++ ++SP Sbjct: 310 SWAGN-PNSRNIIAVVYADGEIVDGRGGIGQVGGDRFSEELRRLRDNDRVKGIVLRVNSP 368 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA A E I R +Q + KP+I + AAS GY I+ S+ I A T++ GSIGV Sbjct: 369 GGSATASEVIAREVQLTREEKPIIVSMGNAAASGGYWIAMGSDRIFAEPTTVTGSIGVFG 428 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + ++ G++ VK+ P S + +Q +Q +VD Y FV V++ Sbjct: 429 LLFNAQDIANQNGITWDGVKTGPFADLNSISRPKTDQELQKVQQMVDFIYQRFVSSVAQL 488 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R++P ++ L +S GR+W+G +A+ +GL+D +GG ++ ++ K+ ++ Sbjct: 489 RDLPQEEVLEMSQGRVWSGVQAEALGLVDQLGGLQDAIAAVAEKAELGDDWKLAEYPRIP 548 Query: 257 NYWFCDLKNLSISSLLEDTI 276 ++ L++L + D + Sbjct: 549 SFEERLLESLRTEATQADPL 568 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 33/265 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 + M + L VV S + V + + I D+ Sbjct: 25 FGMGGIAFLVVVSASRGTQTTLRDKSVLVLDLSVGIADTAPPPTPSIAIGQTLREDRARF 84 Query: 51 ---QELIERIERISRDDSATALIVSLSSPGGSAYAGE---AIFRAIQKVKNRKPVITEVH 104 + ++E IER S+DD L + SS G + + RA++ K I Sbjct: 85 LPLRVVLETIERASKDDKIVGLYLQGSS-GTTPTGFGNLKEVRRALEGFKESGKTIIAYD 143 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 Y + ++ I+ V G Q ++ L++ G+ ++ + K+ Sbjct: 144 TDWTEREYYLGSVADQIIIHPMGTVEMSGFSSQSVFLAGALERFGIGVQVTRVGQYKSAV 203 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRIWTGAEAKK 220 PF E++P+ Q MQ ++ + F ++ SR++ + + DG A+AK Sbjct: 204 EPFLRQEMSPENRQQMQQLLGDLWGEFTGAIASSRSLTTAQLQQIVNQDG-FLMAADAKD 262 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQS 245 ++D + ++EV L L ++ Sbjct: 263 REMVDHIAHRDEVAAKLRELTEEKE 287 >gi|187928004|ref|YP_001898491.1| peptidase S49 [Ralstonia pickettii 12J] gi|187724894|gb|ACD26059.1| peptidase S49 [Ralstonia pickettii 12J] Length = 364 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L L+ + + F S H A + + G+I ++ + ++ Sbjct: 78 RIFFRFVALGLIGVLIYAFASLEGETVSTGRHTAIVTLEGEIAANTNASAENINASLQAA 137 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 138 FADDNTVGVILKINSPGGSPVQAGMINDEIRRLRAKYKKIPLYVVVEEMCASGGYYVAAA 197 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V+P+ Q Sbjct: 198 ADRIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGSNKGMLDPFSPVSPQQKQY 257 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q+++D + F+ +V + R L G WTGA+A +GL D +G + V +S+ Sbjct: 258 AQEMLDQVHQQFIDVVKQGRGNRLKDDPTLFTGLFWTGAKAVDLGLADAIGSSDLVARSV 317 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + L + L +++ L Sbjct: 318 I------KAPDVVDYTVKENFASRVARKLGTAMGAGAVKALATTGQLKLLM 362 >gi|269925543|ref|YP_003322166.1| signal peptide peptidase SppA, 36K type [Thermobaculum terrenum ATCC BAA-798] gi|269789203|gb|ACZ41344.1| signal peptide peptidase SppA, 36K type [Thermobaculum terrenum ATCC BAA-798] Length = 339 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 124/230 (53%), Gaps = 13/230 (5%) Query: 37 HVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +A I + G I++S + L +++ D A+I+ + SPGG A + Sbjct: 69 KIAIIPVTGTIQESAGGFTTSAATPESLKAMLDQAENDSKVKAIILEVDSPGGEVVASDE 128 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 ++R I K R KPV+ + AAS Y IS A++ IVA +L GS+GV+ +Y Sbjct: 129 MYREILDFKQRTRKPVVVRMVSTAASGAYYISMAADKIVANPMTLTGSLGVIMEYMNFSK 188 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+G+S ++S K +PF + + Q++Q +VD +Y+ FV ++++ R +P + Sbjct: 189 AADKVGISQVVIRSGEFKDIGNPFRDPTKEERQILQQLVDEAYNQFVNVIAQGRKMPTSR 248 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 L+DGR+++G +AK++GL+D +G ++ Q L ++ + ++ + Sbjct: 249 VRQLADGRVYSGQQAKQLGLVDELGNLDKAVQVAEQLAGIKNAQVVRYRH 298 >gi|59712250|ref|YP_205026.1| protease IV (signal peptide peptidase) [Vibrio fischeri ES114] gi|59480351|gb|AAW86138.1| protease IV (signal peptide peptidase) [Vibrio fischeri ES114] Length = 618 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 20/283 (7%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE---------LIERIERISRDDSATA 68 + Y+ + S V+ + +A + G I D E + + DD A Sbjct: 309 ISYYDYLSQVQPTVIPDAQDIAVVVASGAIMDGTERQGTVGGDSTAALLRQARGDDKVKA 368 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 369 VVLRVDSPGGSAFASEVIRNEIDALKEAGKPVVVSMSSVAASGGYWISASADKIIAQPTT 428 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+K+G+ + +SP S +N Q+MQ ++ YH Sbjct: 429 ITGSIGIFGILTTFEKSLEKMGIHSDGISTSPFNGV-SITRPLNDDVAQVMQLGIEHGYH 487 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F++LVS+ RN+ + ++ GR+WTG +A K GL+D +G ++ Q+ L +S Sbjct: 488 RFIKLVSDHRNLSLEAVDKVAQGRVWTGKDALKHGLVDQLGDFDDAVQAAAQLANMESYN 547 Query: 248 K--IKDWNPPKNYWFCDL---KNLSISSLLEDTIPLMKQTKVQ 285 +K+ P + +L N S+ + L P Q + Sbjct: 548 LYWVKEPLTPMEQFLEELSMNLNASVRTELFSFAPEALQPTIN 590 Score = 79.8 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 117/332 (35%), Gaps = 50/332 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNS---PHVARIAIRGQIEDSQ------ 51 + F + + + ++ + + + + ++ P + + G I + Sbjct: 19 LSFTRQLVLNLFFLIFIGVIAFAFLDSTPPSTEDKIVEPKALILDLSGPIVEESKFREPL 78 Query: 52 -------------------ELIERIERISRDDSATALIVSL----SSPGGSAYAGEAIFR 88 ++++ I + D++ + L++ L + S I + Sbjct: 79 ERITSDVLGSQKSQENVLFDIVDTIRFAAHDNNVSGLVLHLKEMNET---SLTKLRYIAK 135 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI K KPV S Y ++ ++ + A V G Y K L+K Sbjct: 136 AINTFKAAGKPVYAIGDYYNQS-QYYLASYADKVFMAPDGTVLLRGYGAYTLYYKELLEK 194 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ P+ ++++ A + + + ++ V+ +R I Sbjct: 195 LNVSTHVFRVGTYKSAVEPYLRNDMSDAAKESASAWLTQLWDAYLDDVATNRQIDPKTLT 254 Query: 204 ---TLVLSDGRIWTG---AEAKKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWNP 254 ++ + G ++GL+D + ++EV + L + S ++I ++ Sbjct: 255 MPMDQFIAKLKSVNGDLSQMMVELGLVDKLATRQEVRKDLIEQFGSNGYDSFKQISYYDY 314 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + + +++ + +M T+ QG Sbjct: 315 LSQVQPTVIPDAQDIAVVVASGAIMDGTERQG 346 >gi|153809450|ref|ZP_01962118.1| hypothetical protein BACCAC_03765 [Bacteroides caccae ATCC 43185] gi|149127910|gb|EDM19132.1| hypothetical protein BACCAC_03765 [Bacteroides caccae ATCC 43185] Length = 592 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 132/257 (51%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++ + ++ +D A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYAGSSASDEGIVGSKVSRDLRKLKDNDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISCA++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTKKPVIVSMSDYAASGGYYISCAADTIVAEPTTLTGSIGIFGMVP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G++ VK++ + N ++Q + Y+ F+ +E R++ Sbjct: 423 NVKGLTDKIGLTYDVVKTNKYSDFGNIMRPFNEGEKALLQMTITEGYNTFIGRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+D +GG ++ A ++ I P K + Sbjct: 483 TKEAIEKIAEGRVWTGEAAKELGLVDELGGIDKALDIAVAKADIENYTVISY--PAKQDF 540 Query: 260 FCDLKNLSISSLLEDTI 276 F L ++ +E + Sbjct: 541 FSSLFETKPTNYVEAQL 557 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 31/268 (11%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQ----------------------IED 49 ++S+VTL + + + V + + G I Sbjct: 22 LFIVSMVTLFGIMSASDTETIVKKNSVMMLDLNGTLVERTQENPLDILSQLFSDDSNIYG 81 Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I++ +++ + + SS G S + + I A+ K I + Sbjct: 82 LDDILSSIKKAKENENIKGIYLQASSLGTSYASLQEIRNALLDFKESGKFIIAYGDSYTQ 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 142 GLYYLSSVADKVLLNPKGMIEWRGIAAAPVFYKDLLQKIGVEMQIFKVGTYKSAVEPFIS 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLI 224 +E++P + + ++S + VS SR IP D +D R + E+ K GL Sbjct: 202 TEMSPANREQVTAYINSIWRQVTEGVSNSRYIPVDSLNAYAD-RMLMFYPAEESVKCGLA 260 Query: 225 DVVGGQEEV---WQSLYALGVDQSIRKI 249 D + + +V + L +G D + + Sbjct: 261 DTLIYRNDVRNYLKELVEIGKDDQLPML 288 >gi|284929652|ref|YP_003422174.1| signal peptide peptidase A [cyanobacterium UCYN-A] gi|284810096|gb|ADB95793.1| signal peptide peptidase A [cyanobacterium UCYN-A] Length = 272 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 142/261 (54%), Gaps = 7/261 (2%) Query: 34 NSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + +ARI I+G I L+E +E + AL++ + SPGG+ + I+ A++ Sbjct: 9 TTKQIARIEIKGVINSETRKFLLEALETVKE-KKFPALLLRIDSPGGTVGDSQEIYEALK 67 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K++ + ++ ++AS G IS + I+A ++ GSIGV+ + K L+K+GVS Sbjct: 68 KLQKKTKIVATFGNISASGGVYISMGAPYIMANPGTITGSIGVILRGNNFKELLNKIGVS 127 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + VKS P K S +++P+ +++Q+++D SY F+ +S+ RN+ DKT +DGR Sbjct: 128 FQVVKSGPYKDILSFDRQLSPEEEKILQEMIDISYQQFITTISKERNLDMDKTKSFADGR 187 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK---IKDWNPPKNYWFCDLKNLS 267 I+TG +A K+G++D +G +E+ L G+D K I++ P N F N S Sbjct: 188 IFTGEQALKLGMVDRLGSEEDARCWAAELVGLDPEKTKCFTIEESKPFLNRIFSKNNNKS 247 Query: 268 ISSLLEDTIPLMKQTKVQGLW 288 +L+ D I +T Q LW Sbjct: 248 KFTLMNDRIEFELKTSGQLLW 268 >gi|67924912|ref|ZP_00518304.1| Peptidase S49, SppA [Crocosphaera watsonii WH 8501] gi|67853246|gb|EAM48613.1| Peptidase S49, SppA [Crocosphaera watsonii WH 8501] Length = 272 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 138/264 (52%), Gaps = 6/264 (2%) Query: 35 SPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +ARI I G I +++ + + ++ AL++ + SPGG+ + I+ A++++ Sbjct: 10 SKQIARIEITGAIASETRKYVLDALKTVKEKKFPALLLRIDSPGGTVGDSQEIYEALRRL 69 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 ++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 70 QDEVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLERLLDKVGVSFK 129 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K + E+ + ++Q+++D SY FV V++ RN+ DK +DGRI+ Sbjct: 130 VIKSGPYKDILAFDRELTDEEQHILQEMIDVSYQQFVTTVAQGRNLDVDKVKTFADGRIF 189 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 TG +A ++GL+D +G +E+ L G++ D + PK L S L Sbjct: 190 TGQQALELGLVDRLGTEEDARLWAAELAGLNPDKATCYDLDEPKPLLSRVLSRNQSKSKL 249 Query: 273 EDTIPLMK---QTKVQGLWAVWNP 293 T+ ++ +T Q LW ++ P Sbjct: 250 RTTMDWLEFELKTNGQPLW-LYRP 272 >gi|189425554|ref|YP_001952731.1| signal peptide peptidase SppA, 36K type [Geobacter lovleyi SZ] gi|189421813|gb|ACD96211.1| signal peptide peptidase SppA, 36K type [Geobacter lovleyi SZ] Length = 295 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 125/243 (51%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 + FS + P V + ++G I DS E I ++ ++ DS A+++ + SPGG Sbjct: 30 LLFSDKEKGFVSGPGVGLVEVKGMIVDSTEPIRQLRHFAKKDSVKAVVLRIDSPGGVVGP 89 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I+ ++K+ RK V+ + +AAS GY I+ +++I A ++ SIGVL ++ ++ Sbjct: 90 SQEIYEEVRKLAARKKVVVSMGSLAASGGYYIAAPASVIYANPGTITASIGVLIKFSNLE 149 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 KLGVS ++K+ K +P ++P+ M Q ++DS++ FV+ V+E R +P D Sbjct: 150 GLFGKLGVSSTTIKTGSFKDAGAPDRPLSPEDRAMFQALIDSTHEQFVKAVAEGRKLPVD 209 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + ++DGR+ +G +A+ + L+D +G + + L + K + Sbjct: 210 EVRRIADGRVLSGEQARALKLVDKLGNLPDAVEEAGRLAGISGEPALILPPKKKVNYLEL 269 Query: 263 LKN 265 L Sbjct: 270 LAE 272 >gi|29347289|ref|NP_810792.1| protease IV [Bacteroides thetaiotaomicron VPI-5482] gi|29339188|gb|AAO76986.1| protease IV [Bacteroides thetaiotaomicron VPI-5482] Length = 592 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ D+ A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYSGSSTSEEGIVGTKVIRDLRKLKDDEDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTEKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMVP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + N +MQ ++ Y FV +E R++ Sbjct: 423 NVKELSEKIGLTYDVVKTNKFSDFGNIMRPFNQDEKTLMQMMITQGYDTFVNRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+DV+GG + + + + P K Sbjct: 483 SKEAIEKIAEGRVWTGEAAKELGLVDVLGGIDTALEIAVRKAGIEGYTVVSY--PAKQDL 540 Query: 260 FCDLKNLSISSLLEDTI 276 L N ++ +E I Sbjct: 541 LSSLLNTKPTNYVESQI 557 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 101/255 (39%), Gaps = 30/255 (11%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------------EDS---- 50 ++ +VTL + + + V + + G + +DS Sbjct: 22 LFIIGMVTLFGIVSTADTETIVKKNSVMMLDLNGVLVERTQESPLGILSQLFSDDSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 +++ I++ +++ + + S G++YA + I A+ K I + Sbjct: 82 LDDILSSIKKAKENENIKGIYLQA-SMLGTSYASLQEIRNALLDFKESGKFIIAYGDSYT 140 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 141 QGLYYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFI 200 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGL 223 +E++P + + ++S + VS SR++P D L+D R + E+ + GL Sbjct: 201 STEMSPANREQVTAFINSIWGQVTEGVSASRSLPVDSLNALAD-RMLMFYPAEESVQCGL 259 Query: 224 IDVVGGQEEVWQSLY 238 D + + +V L Sbjct: 260 ADTLIYRNDVRNYLK 274 >gi|237746014|ref|ZP_04576494.1| peptidase U7 family [Oxalobacter formigenes HOxBLS] gi|229377365|gb|EEO27456.1| peptidase U7 family [Oxalobacter formigenes HOxBLS] Length = 315 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 14/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K+ T ++++ L+ + PH A I IRG IE + +I+ ++ Sbjct: 30 IFFKLVTLFLIIFLIVSVRNFSFSEGEGAPVQPHTAVIEIRGTIEATGNASASNIIKALD 89 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 R ++ AT +I+ ++SPGGS I+ I++++N KP+ V E+ AS GY I+ Sbjct: 90 RAYKEPMATGVILKINSPGGSPVQAGMIYDEIRRLRNTYPDKPLYVVVEELCASGGYYIA 149 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGV+ V +DKLG+ + + + K PFS P+ + Sbjct: 150 AAADKIYVDKASIVGSIGVMINGFGVTGLMDKLGIERRLLTAGEYKGFLDPFSPQTPQQI 209 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q Q +++ + F+ +V E R + + G ++ G EA K+GL D +G E V + Sbjct: 210 QYAQSMLNQIHQQFIEVVREGRGNRLKENREIYSGLVFLGPEAIKLGLADDLGTVESVAR 269 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + D+ + LK S Sbjct: 270 DVI------KSPETVDYTEQEKLSDRVLKKFGAS 297 >gi|323702606|ref|ZP_08114268.1| signal peptide peptidase SppA, 36K type [Desulfotomaculum nigrificans DSM 574] gi|323532425|gb|EGB22302.1| signal peptide peptidase SppA, 36K type [Desulfotomaculum nigrificans DSM 574] Length = 312 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 19/281 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHV-----EDNSPHVARIAIRGQIEDS---------- 50 K + + L L++L V I I G I S Sbjct: 4 KLVVGLVIGLVLISLAAAIAIKGDTKIMAGKASTGEKVGVIHIEGTIVSSAPGGFGAGGV 63 Query: 51 ---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEM 106 E++ ++ + A+I+ L++ GGS + I R +++++ + K V+ + EM Sbjct: 64 AAADEIVANLKEARENPEIKAVILRLNTGGGSVVGSDEIGREVERLRRSGKKVVAVMGEM 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY I+C ++ IVA + GSIGV+ Q +K +K+GV +++ K+ P K + Sbjct: 124 AASGGYWIACKADKIVANPGTFTGSIGVIMQVTKMKELYNKIGVDVETFKTGPHKDMGAT 183 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++ P+ ++ Q +V SY F+ +V+E R + + L+DGR++TG +AK +GL+D Sbjct: 184 GRDITPEERRIFQGLVQDSYDDFINVVAEGRKMDPARVRQLADGRVYTGKQAKALGLVDE 243 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 +G + + L + ++ + N+ L L Sbjct: 244 LGDFTDAVKLTARLANIKGEPELVEIGRRDNFLGDLLGGLQ 284 >gi|134301011|ref|YP_001114507.1| signal peptide peptidase SppA, 36K type [Desulfotomaculum reducens MI-1] gi|134053711|gb|ABO51682.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfotomaculum reducens MI-1] Length = 313 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 20/287 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDS------- 50 + KKI T V+ ++ V + + +A + I G I S Sbjct: 1 MRKKIITGIVIGVVLFSLAVAIALKGNGGKTAENTGVGEQIAVVHIEGTIMSSAPGGFGT 60 Query: 51 ------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 ++ ++ + A+I+ L++ GG+ + I R +++V+ K V+ + Sbjct: 61 AGVAAADRIVSELKEARENPEIKAVILKLNTGGGTVVGSDEIGREVERVRKSGKKVVAAM 120 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 EMAAS GY ISC ++ IVA + GSIGV+ Q +K +KLGV + ++K+ K Sbjct: 121 GEMAASGGYWISCKADKIVANPGTFTGSIGVIMQLTEMKDLYNKLGVEVNNIKTGAFKDM 180 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + +++P+ Q+ Q +V+ SY F+++V+ R + + L+DGRI+TG +AK++GL Sbjct: 181 GASNKDLSPEERQIFQGLVNDSYEDFIQVVAAGRKMDPTQVRKLADGRIYTGKQAKQLGL 240 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +D +G E + L + ++ D + W L + Sbjct: 241 VDELGDFNEAVRITANLAGIKGEPELVDMTGEQLLWQQLFGGLQGKN 287 >gi|311031314|ref|ZP_07709404.1| signal peptide peptidase SppA, 36K type [Bacillus sp. m3-13] Length = 336 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 138/271 (50%), Gaps = 22/271 (8%) Query: 33 DNSPH--VARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSS 75 D SP+ + + + G I+D+ ++ + +++ DD+ +IV +++ Sbjct: 54 DGSPNRKILVLEVNGVIQDTGSDVTSVFQSPGYNHRQFLRMLDQAKEDDTVQGIIVRVNT 113 Query: 76 PGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I + + ++K KP+ + MAAS GY I+ +N I A+ ++ GSIG Sbjct: 114 PGGGVSESAEIHKRLVEIKEETEKPIYISMGTMAASGGYYIAAPANKIFASPETITGSIG 173 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ Q +K GV ++KS P K SP +++ + Q++Q +VD+ Y FV+++ Sbjct: 174 VIMQGINYSELAEKYGVKFDTIKSGPYKDIMSPTKDMSEEERQILQSMVDNMYDQFVKVI 233 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + R + + ++DGRI+ G +AK + ++D +G E+V + A+ D + ++ Sbjct: 234 VDGRGMSESEVRRIADGRIYDGQQAKDINIVDELGYFEDVIE---AMKKDHEMGNVQVVQ 290 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +N + L ++++ SLL+ + K+ Sbjct: 291 YTENLGWGSLFSMNVQSLLKPESEMQMLAKL 321 >gi|197334260|ref|YP_002156464.1| signal peptide peptidase SppA, 67K type [Vibrio fischeri MJ11] gi|197315750|gb|ACH65197.1| signal peptide peptidase SppA, 67K type [Vibrio fischeri MJ11] Length = 618 Score = 260 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 20/283 (7%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE---------LIERIERISRDDSATA 68 + Y+ + S V+ + +A + G I D E + + DD A Sbjct: 309 ISYYDYLSQVQPTVIPDAQDIAVVVASGAIMDGTERQGTVGGDSTAALLRQARGDDKVKA 368 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 369 VVLRVDSPGGSAFASEVIRNEIDALKEAGKPVVVSMSSVAASGGYWISASADKIIAQPTT 428 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+K+G+ + +SP +N Q+MQ ++ YH Sbjct: 429 ITGSIGIFGILTTFEKGLEKMGIHSDGISTSPFNGVG-ITRPLNDDVAQVMQLGIEHGYH 487 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F++LVS+ RN+ + ++ GR+WTG +A K GL+D +G ++ Q+ L +S Sbjct: 488 RFIKLVSDHRNLSLEAVDKVAQGRVWTGKDALKHGLVDQLGDFDDAVQAAAQLANMESYN 547 Query: 248 K--IKDWNPPKNYWFCDL---KNLSISSLLEDTIPLMKQTKVQ 285 +K+ P + +L N S+ + L P Q + Sbjct: 548 LYWVKEPLTPMEQFLEELSMNLNASVRTELFSFAPEALQPTIN 590 Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 117/332 (35%), Gaps = 50/332 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNS---PHVARIAIRGQIEDSQ------ 51 + F + + + ++ + + + + ++ P + + G I + Sbjct: 19 LSFTRQLVLNLFFLIFIGVIAFAFLDSTPPSTEDKIVEPKALILDLSGPIVEESKFREPL 78 Query: 52 -------------------ELIERIERISRDDSATALIVSL----SSPGGSAYAGEAIFR 88 ++I+ I + D++ + L++ L + S I + Sbjct: 79 ERITSDVLGSQKSQENVLFDIIDTIRFAAHDNNVSGLVLHLKEMNET---SLTKLRYIAK 135 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI K KPV S Y ++ ++ + A V G Y K L+K Sbjct: 136 AINTFKAAGKPVYAIGDYYNQS-QYYLASYADKVFMAPDGTVLLRGYGAYTLYYKELLEK 194 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ P+ ++++ A + + + ++ V+ +R I Sbjct: 195 LNVSTHVFRVGTYKSAVEPYLRNDMSDAAKESASVWLTQLWDAYLDDVATNRQIDPKTLT 254 Query: 204 ---TLVLSDGRIWTG---AEAKKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWNP 254 ++ + G ++GL+D + ++EV + L + S ++I ++ Sbjct: 255 MPMDQFIAKLKSVNGDLSQMTVELGLVDKLATRQEVRKDLIEQFGSNGYDSFKQISYYDY 314 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + + +++ + +M T+ QG Sbjct: 315 LSQVQPTVIPDAQDIAVVVASGAIMDGTERQG 346 >gi|218705264|ref|YP_002412783.1| protease 4 [Escherichia coli UMN026] gi|218432361|emb|CAR13251.1| protease IV (signal peptide peptidase) [Escherichia coli UMN026] Length = 618 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + ++ KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARSAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|209528245|ref|ZP_03276710.1| signal peptide peptidase SppA, 67K type [Arthrospira maxima CS-328] gi|209491317|gb|EDZ91707.1| signal peptide peptidase SppA, 67K type [Arthrospira maxima CS-328] Length = 503 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 130/260 (50%), Gaps = 10/260 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 SW+ + ++ +A + G+I D E + R+ +D +++ ++SP Sbjct: 211 SWAGN-PNSRNIIAVVYADGEIVDGRGGIGQVGGDRFSEELRRLRDNDRVKGIVLRVNSP 269 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA A E I R +Q + KP+I + AAS GY I+ S+ I+A T++ GSIGV Sbjct: 270 GGSATASEVIAREVQLTREEKPIIVSMGNAAASGGYWIAMGSDRILAEPTTVTGSIGVFG 329 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + ++ G++ VK+ P S + ++ +Q +VD Y FV V++ Sbjct: 330 LLFNAQDIANQNGITWDGVKTGPFADLNSISRPKTDQELEKVQQMVDLIYQRFVSSVAQL 389 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R++P ++ L +S GR+W+G +A+ +GL+D +GG ++ ++ K+ ++ Sbjct: 390 RDLPQEEVLEMSQGRVWSGVQAEALGLVDQLGGLQDAIAAVAEKAELGDDWKLAEYPRIP 449 Query: 257 NYWFCDLKNLSISSLLEDTI 276 ++ L++L + D + Sbjct: 450 SFEERLLESLRTEATPADPL 469 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 5/165 (3%) Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + RA++ K I Y + ++ I+ V G Q ++ Sbjct: 25 EVRRALEGFKESGKTIIAYDTDWTEREYYLGSVADEIIIHPMGTVEMSGFSSQTVFLAGA 84 Query: 145 LDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L++ G+ ++ + K+ PF E++P+ Q MQ ++ + F ++ SR++ Sbjct: 85 LERFGIGVQVTRVGQYKSAVEPFLRQEMSPENRQQMQQLLGDLWGEFTGAIASSRSLTTA 144 Query: 203 KTLVL--SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + + DG A+AK ++D + ++EV L L ++ Sbjct: 145 QLQQIVNQDG-FLMAADAKDREMVDQIAHRDEVAAQLRELTGEKE 188 >gi|170768773|ref|ZP_02903226.1| protease 4 [Escherichia albertii TW07627] gi|170122321|gb|EDS91252.1| protease 4 [Escherichia albertii TW07627] Length = 618 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRSELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L+ +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLNSIGVHTDGVSTSPLADI-SITKALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARKSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L +T M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPETFQAMLPAPL 584 Score = 98.7 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 111/290 (38%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + +S ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSNSDTKETAGRGALLLDISGVIVDKPDSSQRFSRLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRRQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAIGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGR 211 K+ PF +++P A + + + ++ V+ +R IP + + DG Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLDGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 TG + A L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALDNKLVDALASSAEIEKALTKEFGWNKADKNYRAISYYD 315 >gi|167629015|ref|YP_001679514.1| signal peptide peptidase sppa, 36k type [Heliobacterium modesticaldum Ice1] gi|167591755|gb|ABZ83503.1| signal peptide peptidase sppa, 36k type [Heliobacterium modesticaldum Ice1] Length = 310 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 143/285 (50%), Gaps = 20/285 (7%) Query: 19 TLTVVYFSWSSHVEDN---SPHVARIAIRGQIED---------------SQELIERIERI 60 ++ ++ F +H D VA + + G I D S +++E + R+ Sbjct: 19 SVLLILFRPGAHRADGPSAGNTVAVVRLEGMIADAGAGAGAGLLGGESGSGQVLEALRRL 78 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASN 119 +D A+++ ++SPGG++ A + I R + +++ K V+ + ++AAS GY ++ ++ Sbjct: 79 QQDKQIKAVVLRINSPGGTSAASQEIGREVDRLRESGKVVVASMGDVAASGGYWVAARAD 138 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA + GSIGV+ + K+G +KS P K S E+ P+ ++Q Sbjct: 139 KIVANAATTTGSIGVILDLANLTELYQKIGYRPNVIKSGPYKDIASSAREMTPEERAILQ 198 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VD Y F+ +V+E R++P+++ L+DGR++TG +AK++GL+D +G + Sbjct: 199 GMVDDIYQQFIDVVAEGRHMPHEQVRALADGRVFTGRQAKELGLVDELGNFYDAVALAGT 258 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + + +I+++ + L ++ + L T+ ++ + Sbjct: 259 MAGIRGEPEIREYG-RGSALDRLLSGMTSTGLFGQTLSPVRLLDL 302 >gi|325291771|ref|YP_004277635.1| protease IV [Agrobacterium sp. H13-3] gi|325059624|gb|ADY63315.1| putative protease IV [Agrobacterium sp. H13-3] Length = 317 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 119/300 (39%), Positives = 187/300 (62%), Gaps = 10/300 (3%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + +I ++ ++ + + F W++ + PH+AR+ I G I+D+ EL+ER+++I+ Sbjct: 15 KLTFWRIAAVFLFVAGI-FGLYRFLWATPQQSERPHIARVQISGLIQDNTELLERLDKIA 73 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + D+ LIVS+SSPGG+ Y GE IF+AI+ V +KPV+++V +AASAGY+I+ A ++I Sbjct: 74 KSDNVKGLIVSISSPGGTTYGGERIFKAIRGVAEKKPVVSDVRTLAASAGYMIASAGDVI 133 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ETS+ GSIGV+FQYP + +DKLGVS++ +KSSPMKAEPSPF E +A M++ + Sbjct: 134 VAGETSITGSIGVIFQYPQIGQLMDKLGVSLQEIKSSPMKAEPSPFHEAPEEAKTMIRSM 193 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V SY WFV LV++ R +P + L L+DG I+TG +A L+D +GG++E+ G Sbjct: 194 VMDSYGWFVDLVADRRKLPREDVLKLADGSIFTGRQALANKLVDTLGGEKEIRGYFETRG 253 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLL--EDTIPL-------MKQTKVQGLWAVWN 292 V + + ++ P + F I+ LL +D IP + + GL +VW Sbjct: 254 VAKDLPIVEWRAPSSSSPFSLFSVAQIAKLLGYDDLIPFAGSGQLGADKLFLDGLVSVWQ 313 >gi|304392326|ref|ZP_07374267.1| signal peptide peptidase A [Ahrensia sp. R2A130] gi|303295430|gb|EFL89789.1| signal peptide peptidase A [Ahrensia sp. R2A130] Length = 323 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 103/277 (37%), Positives = 166/277 (59%), Gaps = 13/277 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 S + H+AR++I G I+ + L+E +E+I +DDS ++++++SPGG+ GE IF Sbjct: 46 SGQGASGDHIARVSISGVIQQDRPLLEMLEKIEKDDSVKGVVLTINSPGGTTVGGEDIFN 105 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A++KV +KPV V +AASAGY+I+ S+ IVA +S+VGSIGV+FQYP LDK+ Sbjct: 106 AVRKVAEKKPVAASVGTLAASAGYMIATGSDHIVARRSSIVGSIGVIFQYPQAHKLLDKI 165 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GVS++ VKS+P+KAEPSPF P A+ ++++++D SY WFV LV++ R + + L L+ Sbjct: 166 GVSLEEVKSAPLKAEPSPFHVPPPGAIAVIEELIDDSYQWFVDLVTDRRPLNRAEVLALA 225 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---------- 258 DGRI +G + LID +G +E + + A ++ DWNP + Sbjct: 226 DGRIMSGDRGVETKLIDAIGDEEAARKWITAKDGIADDLELVDWNPKRKEDSLFFRSQAR 285 Query: 259 -WFCDLKNLSISSLLEDTIPLM--KQTKVQGLWAVWN 292 W L ++L ++ + + K+ + GL ++W Sbjct: 286 AWVAQQLGLPAAALPDEALDRIIPKRLFLDGLLSLWQ 322 >gi|300864377|ref|ZP_07109249.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] gi|300337603|emb|CBN54395.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] Length = 601 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 121/245 (49%), Gaps = 9/245 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 D+ +A I G I D + + + + + +++ A+++ ++SPGGSA A Sbjct: 309 ADDKKQIAVIYAEGDIVDGEGSPTQVGGDRIAKELRELRENENVKAVVLRVNSPGGSATA 368 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + + +KPVI + +AAS GY IS +N I A ++ GSIGV + Sbjct: 369 SEVIGREVVLTRKKKPVIVSMGNLAASGGYWISMNANRIFAEPNTITGSIGVFGLLMNAQ 428 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G+S +VK+ + P+ + +Q VVD Y F + V++SR +P Sbjct: 429 RLANNNGISWDTVKTGRYADSETISRPKTPQELANIQRVVDRIYDRFTQKVAQSRKLPLA 488 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 K ++ GR+W+G+ AK++GL+D +GG E Q+ ++++ ++ Sbjct: 489 KVQEIAQGRVWSGSAAKQLGLVDEIGGIENAIQAAAKQAKLGDNWHLEEYPKRRSLEERI 548 Query: 263 LKNLS 267 L+ LS Sbjct: 549 LERLS 553 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 98/246 (39%), Gaps = 16/246 (6%) Query: 21 TVVYFSWSSHVEDNSPHV----ARIAIRGQIEDSQELIERIERISRDDSATALIV--SLS 74 +V+ S ++ D+ P+ A R + +++ +E +D L + S Sbjct: 50 SVIVLDLSLNITDSKPNTTIGEALSEDRSDTMTLRSVLDALETAKKDPKIVGLYLQGSAD 109 Query: 75 SPGGSAYAGE--AIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 S GS I A+Q K++KP+ + Y + +N I V Sbjct: 110 S--GSTGWANLKEIRLALQNFQKSKKPIFAYDMDWTERE-YYLGSVANTIAVNPLGGVEI 166 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWF 189 G + ++ L+K G+ ++ + K+ PF +++P+ Q + + + F Sbjct: 167 NGFSSEQMFLSGALEKFGIGVQVTRVGKYKSAVEPFLLKKMSPENRQQTEQWLGDIWSEF 226 Query: 190 VRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIR 247 + V+++R + + ++D R EA LID V +E+ L L G+D+ + Sbjct: 227 LNTVTQNRKLKTSQLQAIADNRGTLMADEALNSKLIDKVAYFDEIVAELKKLTGIDRENK 286 Query: 248 KIKDWN 253 K Sbjct: 287 SFKQIT 292 >gi|258648041|ref|ZP_05735510.1| signal peptide peptidase SppA [Prevotella tannerae ATCC 51259] gi|260851896|gb|EEX71765.1| signal peptide peptidase SppA [Prevotella tannerae ATCC 51259] Length = 587 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 123/227 (54%), Gaps = 4/227 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 VY+++ V+ ++ +RG ++I+ ++ ++ DD+ A+++ ++S GGSA Sbjct: 302 VAVYYAYGDIVDASTSSGG---LRGDEIVGNQVIQDLDELANDDNIKAVVLRVNSGGGSA 358 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+ A++ +K +KPV+ + AAS GY ISC ++ I+A T++ GSIG+ P Sbjct: 359 YASEQIWHAVELLKKKKPVVVSMGGTAASGGYYISCGADKIIADPTTVTGSIGIFGMIPD 418 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + +KLG+ VK++ + + + +Q+ V+ Y F++ V+ RN Sbjct: 419 FSGLMTEKLGLHFDIVKTNEASDFGAMGRGMTAAEGEALQNYVNRGYGLFLKRVANGRNK 478 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 ++ ++ GR+WTG +A K+GLID +G E+ + L + Sbjct: 479 TVEQINQVAQGRVWTGRQALKLGLIDQLGTLEDAIKEAARLAKLEKY 525 Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 94/270 (34%), Gaps = 43/270 (15%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------- 50 + + + + LV L VV S S V +I + G I + Sbjct: 15 MFIMGAFTMAMGLVMLFVVSLSDSMKPTIARHSVLKITLSGTISERSAGANPLASILGNP 74 Query: 51 -------QELIERIERISRDDSATALIVSLSSPGGSA---YAG-EAIFRAIQKVKNRKPV 99 +++ I + + + GG A + I +A+ K Sbjct: 75 MADEQGLDDILSAIRVAKDNKRIEGIYLD----GGVVSTDVASLQEIRKALIDFKKSGKF 130 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 I + + Y + ++ ++ ++ G+ + K L+K+GV ++ + Sbjct: 131 IVSYADSYSQGSYYVCSVADKVLLNPVGMLDWHGLSSNPIFYKDLLEKVGVKMQVFRVGT 190 Query: 160 MKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-------LVLSDG 210 K+ P+ +E++P+ + ++ + V++SR +P + +D Sbjct: 191 YKSFVEPYTRTEMSPENREQTAFLLGGLWKDLCTEVAQSRRLPVEAINNYANQYQNFADP 250 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ + L+D + EEV L + Sbjct: 251 SVYINEK-----LVDKLVYIEEVRNVLRDM 275 >gi|319651852|ref|ZP_08005977.1| signal peptide peptidase [Bacillus sp. 2_A_57_CT2] gi|317396504|gb|EFV77217.1| signal peptide peptidase [Bacillus sp. 2_A_57_CT2] Length = 336 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 134/269 (49%), Gaps = 19/269 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 + +A + + G I+D+ + ++ +E + D + A+++ ++SPG Sbjct: 56 GNAQKKIAVLDVNGVIQDTGDAASLFASPGYNHKGFMDNLEYVKEDGTVKAIVIKVNSPG 115 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ +KPV + MAAS GY IS ++ I A+ ++ GS+GV+ Sbjct: 116 GGVVESAEIHDKIIEIQKETKKPVYISMGSMAASGGYYISAPADKIFASPETMTGSLGVI 175 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q +K GV ++KS P K SP ++ + +++Q ++D+SY FV+++SE Sbjct: 176 MQGYNYAGLAEKYGVEFVTIKSGPYKDIMSPTRDMTDEERKILQSMIDNSYAGFVKVISE 235 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + + ++DGRI+ G +AK++ LID G ++V + L D + + Sbjct: 236 GRGLTEAQVKEIADGRIYDGRQAKELNLIDGFGYADDVIEQLKK---DHKLDGAQVVEYT 292 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +N+ F + ++ ++ D + + K+ Sbjct: 293 ENFGFGSMFSMGARKIMGDDLEMAGMMKL 321 >gi|319902957|ref|YP_004162685.1| signal peptide peptidase A [Bacteroides helcogenes P 36-108] gi|319417988|gb|ADV45099.1| signal peptide peptidase A [Bacteroides helcogenes P 36-108] Length = 591 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 71/247 (28%), Positives = 130/247 (52%), Gaps = 8/247 (3%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQ-IEDSQELIERIERISRDDSATALIVSLSSPGG 78 + +Y+++ +S + G+ +S+++I+ + ++ D A+++ ++SPGG Sbjct: 306 VIAIYYAYGEIDGGSSS-----TLTGEEGINSEKVIKDLRKLKDDKDVKAVVLRVNSPGG 360 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+ A+ ++K +KPVI + + AAS GY ISC ++ IVA T+L GSIG+ + Sbjct: 361 SAYGSEQIWYAVSELKKKKPVIVSMGDYAASGGYYISCNADTIVAEPTTLTGSIGIFGMF 420 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P K DK+G+S VK++ +N ++Q ++ Y F+ SE R Sbjct: 421 PNAKGLADKIGISFDVVKTNRYSDFGMITRPMNEGEKGLLQMYINQGYDTFLARCSEGRG 480 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 I ++ ++ GR+WTG++AK++GL+D +GG + + A + + P K Sbjct: 481 ISKEELDKIAQGRVWTGSKAKELGLVDELGGIDRALEIAIAKAGTDTYTIMSY--PKKEN 538 Query: 259 WFCDLKN 265 + N Sbjct: 539 FLESFMN 545 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 102/279 (36%), Gaps = 30/279 (10%) Query: 1 MEFVLKKIKTRYV------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---- 50 ++F L I V +S++ + S S + + + + G + + Sbjct: 5 LKFTLATITGIIVSSIILFFISILVFFSIVSSSDSETQVRKNSIMMLDLNGMLAERTQEN 64 Query: 51 ---------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 +++ I++ + + + S GG+++A E I +++ K Sbjct: 65 PFDFLLGDEYNTYGLDDILSSIKKAKENADIKGIYIQACSLGGASFASLEEIRNSLKDFK 124 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 I + + Y +S ++ ++ V G+ + K L K+GV ++ Sbjct: 125 ESGKFIVAYGDTYTQSLYYLSSIADKVLLNPKGAVEWKGLAASPMFFKDLLGKIGVEMQI 184 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-- 210 K K+ PF +E++P + + + S + + V+ SR I D ++ Sbjct: 185 FKVGTYKSAVEPFISTEMSPANREQVNAYLASIWKQIMGDVATSRKISVDSLNAAANSML 244 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + K GL D + + +V L + + K+ Sbjct: 245 MFYPAERCVKAGLADTLIYKNDVRNYLKTMAGIEENDKM 283 >gi|296113528|ref|YP_003627466.1| signal peptide peptidase SppA [Moraxella catarrhalis RH4] gi|295921222|gb|ADG61573.1| signal peptide peptidase SppA [Moraxella catarrhalis RH4] gi|326559531|gb|EGE09945.1| signal peptide peptidase SppA [Moraxella catarrhalis 7169] gi|326562731|gb|EGE13033.1| signal peptide peptidase SppA [Moraxella catarrhalis 103P14B1] gi|326567786|gb|EGE17892.1| signal peptide peptidase SppA [Moraxella catarrhalis BC1] gi|326568577|gb|EGE18648.1| signal peptide peptidase SppA [Moraxella catarrhalis BC7] gi|326568702|gb|EGE18772.1| signal peptide peptidase SppA [Moraxella catarrhalis BC8] gi|326572571|gb|EGE22560.1| signal peptide peptidase SppA [Moraxella catarrhalis CO72] gi|326574167|gb|EGE24115.1| signal peptide peptidase SppA [Moraxella catarrhalis 101P30B1] Length = 342 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 125/255 (49%), Gaps = 13/255 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIER 56 LK + +++ ++ L + S E N PH+A I + G I ++Q + + Sbjct: 53 LKLLTFAFLVFFIIVLGFGCSGFGSSFERIGINEPHIAIIDVNGAIMTNGDVNAQNINDS 112 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 + ++ A A++++++SPGGS + I++ ++ K + + ++ AS Y Sbjct: 113 LMEAFENNQAKAVVLNINSPGGSPVQSDEIWQMAMMLRQEYPDKKLYAIIGDLGASGAYY 172 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I +SLVGSIGV+ ++ + K+GV +++ + K S E+ Sbjct: 173 IASAADEIWVNPSSLVGSIGVIMSGYNLEELMKKVGVKDRTITAGEYKDILSSSREMTET 232 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 Q +Q +++ ++ F++ V + R + L G IWTG +A ++GL D GG Sbjct: 233 ERQHIQALLNKTHQNFIKAVKQGRGSKLKNPEQNQLFSGLIWTGTDAVELGLADKTGGIS 292 Query: 232 EVWQSLYALGVDQSI 246 ++ ++L VD + Sbjct: 293 QLKKTLDLQTVDYTY 307 >gi|298385314|ref|ZP_06994873.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 1_1_14] gi|298262458|gb|EFI05323.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 1_1_14] Length = 593 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 14/246 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ D+ A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYSSSSTSEEGIVGTKVIRDLRKLKDDEDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTEKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMVP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + N +MQ ++ Y FV +E R++ Sbjct: 423 NVKELSEKIGLTYDVVKTNKFSDFGNIMRPFNQDEKTLMQMMITQGYDTFVNRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+DV+GG + + + + P K Sbjct: 483 SKEAIEKIAEGRVWTGEAAKELGLVDVLGGIDTALEIAVRKAGIEGYTVVSY--PAKQDL 540 Query: 260 FCDLKN 265 L N Sbjct: 541 LSSLLN 546 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 101/255 (39%), Gaps = 30/255 (11%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------------EDS---- 50 ++ +VTL + + + V + + G + +DS Sbjct: 22 LFIIGMVTLFGIVSTADTETIVKKNSVMMLDLNGVLVERTQESPLGILSQLFSDDSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 +++ I++ +++ + + S G++YA + I A+ K I + Sbjct: 82 LDDILSSIKKAKENENIKGIYLQA-SMLGTSYASLQEIRNALLDFKESGKFIIAYGDSYT 140 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 141 QGLYYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFI 200 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGL 223 +E++P + + ++S + VS SR++P D L+D R + E+ + GL Sbjct: 201 STEMSPANREQVTAFINSIWGQVTEGVSASRSLPVDSLNALAD-RMLMFYPAEESVQCGL 259 Query: 224 IDVVGGQEEVWQSLY 238 D + + +V L Sbjct: 260 ADTLIYRNDVRNYLK 274 >gi|254501657|ref|ZP_05113808.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] gi|222437728|gb|EEE44407.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] Length = 328 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 98/303 (32%), Positives = 173/303 (57%), Gaps = 12/303 (3%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + ++ T V ++ +VYF+ ++++ S H+ARI I G I ++++ +E +E+I Sbjct: 17 KVTFWRVATFLVAALVLIGGLVYFAGAANMSKRSAHIARIPIEGMILENRKTLEMLEKIG 76 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + D+ +IVS++SPGGS GEAI+ A++K+ +KP++ E+ + SAGYLI+ +++ I Sbjct: 77 KSDAVKGVIVSINSPGGSTTGGEAIYNALRKLSEKKPIVAEMRTIGTSAGYLIAMSADHI 136 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA ++ GSIGVLFQ+ + L+ +GVS+++VKS+P+KAEP +S P+A M+Q + Sbjct: 137 VARYNTITGSIGVLFQFGNFEKLLETVGVSMEAVKSAPLKAEPDFYSPATPEAKAMLQAM 196 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V SY+WFV +++E R++ K L L+DGR+ G A + L+D +GG+E L Sbjct: 197 VTDSYNWFVDILAERRDLDKSKALELADGRVLLGQRALQEKLVDAIGGEETAVSWLETEK 256 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKN-----------LSISSLLEDTIPLMKQ-TKVQGLWA 289 + W ++ + L++ L + L+ + + GL + Sbjct: 257 GVAKDLPVITWTTTESIEELPFASRVSREIGKGFGLAVLEPLNEAKGLISRDLMLDGLVS 316 Query: 290 VWN 292 VW Sbjct: 317 VWQ 319 >gi|326564633|gb|EGE14851.1| signal peptide peptidase SppA [Moraxella catarrhalis 46P47B1] gi|326565450|gb|EGE15621.1| signal peptide peptidase SppA [Moraxella catarrhalis 12P80B1] gi|326575606|gb|EGE25530.1| signal peptide peptidase SppA [Moraxella catarrhalis O35E] Length = 342 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 125/255 (49%), Gaps = 13/255 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIER 56 LK + +++ ++ L + S E N PH+A I + G I ++Q + + Sbjct: 53 LKLLTFAFLVFFIIVLGFGCSGFGSSFERIGINEPHIAIIDVNGAIMTNGDVNAQNINDS 112 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYL 113 + ++ A A++++++SPGGS + I++ ++ K + + ++ AS Y Sbjct: 113 LMEAFENNQAKAVVLNINSPGGSPVQSDEIWQMAMMLRQEYPDKKLYAIIGDLGASGAYY 172 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I +SLVGSIGV+ ++ + K+GV +++ + K S E+ Sbjct: 173 IASAADEIWVNPSSLVGSIGVIMSGYNLEELMKKVGVKDRTITAGEYKDILSSSREMTET 232 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 Q +Q +++ ++ F++ V + R + L G IWTG +A ++GL D GG Sbjct: 233 ERQHIQALLNKTHQNFIKAVKQGRGSKLKNPEQNQLFSGLIWTGTDAVELGLADKTGGIS 292 Query: 232 EVWQSLYALGVDQSI 246 ++ ++L VD + Sbjct: 293 QLKKTLDLQTVDYTY 307 >gi|320101772|ref|YP_004177363.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] gi|319749054|gb|ADV60814.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] Length = 379 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 10/269 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + +A I I G I+DS + +I + S D S +++ + SPGG+ A + Sbjct: 86 AGPIGPGKAKLAIIEITGSIDDSKADGISRQITQASLDSSVKGVLLRIDSPGGTVSASDR 145 Query: 86 IFRAIQ-KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++R +Q ++ RKPV+ + AAS GY I+CA + + A ++ GSIGV+ + P + Sbjct: 146 LWRDVQTRLVGRKPVVVSMGSRAASGGYYIACAGDALFAEPATITGSIGVILEIPQISGL 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LDK+GV ++ + K S + + + Q +D SY F+R+V++ R + + Sbjct: 206 LDKIGVEFATLTTGKFKDSGSIYRPITNEERQRFLKSIDQSYQRFLRVVAQGRKMELSQL 265 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L+DG I++G EA + GL+D +G Q++ + L L + + ++ P N L+ Sbjct: 266 KPLADGSIFSGEEALENGLVDFLGYQDDALRHLLKLTRLEEAQVVRYV--PPNSLATLLE 323 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L + S L P ++W P Sbjct: 324 LLELGSRLPSPHP-----DPDESLSLWAP 347 >gi|220922181|ref|YP_002497482.1| signal peptide peptidase SppA, 36K type [Methylobacterium nodulans ORS 2060] gi|219946787|gb|ACL57179.1| signal peptide peptidase SppA, 36K type [Methylobacterium nodulans ORS 2060] Length = 321 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 158/296 (53%), Gaps = 11/296 (3%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDN-----SPHVARIAIRGQIEDSQELIERIERISRD 63 R V + + + W + +P +ARI+I G I S++ E ++R+ Sbjct: 20 FWRVVGIGALIVAAGAVGWRAAGARGPFPAITPQIARISIDGFIAGSEKTRELMKRVGDS 79 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + + +IVS++SPGG+ E +FR ++++ +KPV+ V AAS Y+ + A++ IVA Sbjct: 80 SAVSGVIVSINSPGGTTTGSEELFRNLRQLAEKKPVVAFVDGTAASGAYITALAADHIVA 139 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ETSLVGSIGVLFQYP + LDK+GV ++ VKSSP+KAEPS F +P+ +Q +V Sbjct: 140 RETSLVGSIGVLFQYPDLSGLLDKVGVRVEQVKSSPLKAEPSGFHPTSPEGRAALQAIVG 199 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +Y WF LV+E R + + +SDGR+++G + ++ L+D G + + L Sbjct: 200 DTYVWFKNLVAERRKLTPAELGAVSDGRVFSGRQGVELKLVDETGSERQAVAWLERERKV 259 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK------VQGLWAVWNP 293 I+DW P + F S+ L E L + T+ GL A+W P Sbjct: 260 AKDLPIRDWKPRSDRTFNLFSAASLLGLEEVAGRLRRTTEDAAALAQGGLLALWRP 315 >gi|47093447|ref|ZP_00231211.1| peptidase, U7 family [Listeria monocytogenes str. 4b H7858] gi|47018175|gb|EAL08944.1| peptidase, U7 family [Listeria monocytogenes str. 4b H7858] gi|328465083|gb|EGF36357.1| hypothetical protein LM1816_12752 [Listeria monocytogenes 1816] Length = 337 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLAGATVIQYDAPG 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|170720705|ref|YP_001748393.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida W619] gi|169758708|gb|ACA72024.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida W619] Length = 341 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 136/294 (46%), Gaps = 18/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L + + ++ H A + +RG I D + L++ + Sbjct: 55 IFFKLLTFVYLFGVLALFLPWTDMDKAASRSASHTALVEVRGVIADQEAASADNLVKSLR 114 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 115 EAFKDPKTKAVVMRINSPGGSPVQAGYVYDEIRRLRGEYPDIKLYAVIADLGASGAYYIA 174 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ + KA PFS P+ Sbjct: 175 SAADEIYADKASLVGSIGVTAAGYGFVGSMEKLGVERRTYTAGEHKAFLDPFSPEKPEER 234 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+++++ F+ +V + R + + L G +W+G +AK +GL+D +G V Sbjct: 235 AFWQGVLNTTHQQFIAMVKQGRGDRLKDKEHPELFSGLVWSGEQAKALGLVDGLGSASYV 294 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + + D+ ++ + D + I + + + + + + L Sbjct: 295 AREIVG------EKDLVDFTVEESPF--DRFSKRIGASVAEKLAMYMGFQGPAL 340 >gi|226224186|ref|YP_002758293.1| protease [Listeria monocytogenes Clip81459] gi|254931525|ref|ZP_05264884.1| peptidase [Listeria monocytogenes HPB2262] gi|225876648|emb|CAS05357.1| Putative protease [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583079|gb|EFF95111.1| peptidase [Listeria monocytogenes HPB2262] gi|332312027|gb|EGJ25122.1| Putative signal peptide peptidase sppA [Listeria monocytogenes str. Scott A] Length = 337 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLADATVIQYDTPE 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 NFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|296116410|ref|ZP_06835024.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter hansenii ATCC 23769] gi|295977003|gb|EFG83767.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter hansenii ATCC 23769] Length = 314 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 7/289 (2%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRDDSATALI 70 M + L + D H+ R+ I G + D+ + + I R + + ++ Sbjct: 26 VAMFACGLLAISGRGIWGARGDGRDHLVRLRIDGVVGSDTTDTLALIRRARSNPAVKGML 85 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +++PGG+ GE + AI + +KPV + +AASAGY+I+ + + A ++L G Sbjct: 86 LDINTPGGAVTGGETLHDAIAEFARQKPVAVSMGSLAASAGYMIAVPAQRLFAHHSTLTG 145 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ Q P V LDK+GV + + S PMK +PS ++P+ +M+Q V+ Y FV Sbjct: 146 SIGVIMQAPDVSGLLDKVGVRVDQLVSGPMKGQPSAVQPLSPQGREMLQGVIADLYDMFV 205 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +V++ R++P +K L L+DGR +TG++A +GL+D +GG+EE + L ++ Sbjct: 206 TMVAQGRHLPREKVLELADGRPYTGSQALSLGLVDQIGGEEEAKEWLIRTLHLSETVDVE 265 Query: 251 DWNPPKNY---WFCDLKNLSISSLLE-DTIPLMKQT--KVQGLWAVWNP 293 D P ++ W L + + E D + + + + G A+W P Sbjct: 266 DMKPRPSFHLDWMRHLLGSVMGIVAESDRLDGLFRPGGDLDGAVAIWKP 314 >gi|221214108|ref|ZP_03587081.1| peptidase S49 [Burkholderia multivorans CGD1] gi|221166285|gb|EED98758.1| peptidase S49 [Burkholderia multivorans CGD1] Length = 330 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L+ L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLAVFLLLAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFEDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDSVAR 283 Query: 236 SLYA 239 + Sbjct: 284 EVIK 287 >gi|313637993|gb|EFS03284.1| putative signal peptide peptidase SppA [Listeria seeligeri FSL S4-171] Length = 337 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 136/287 (47%), Gaps = 22/287 (7%) Query: 18 VTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDSQE--------------LIERI 57 + + F+ ++ + + +A +++ G I+D+ E ++++ Sbjct: 37 IAVIDTLFAGTNELTETVIEKAGPSKIAVLSVDGTIQDTGESTSLLGSTGYNHSFFMDQL 96 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLIS 115 E++ D+S +++ ++SPGG I I +++ + P + MAAS GY IS Sbjct: 97 EQVRDDESIKGVLLYVNSPGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYIS 156 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I A++ +L GS+GV+ Q + KLG++ ++KS K S + Sbjct: 157 APADKIFASKETLTGSLGVIMQGYDYSELMKKLGITDNTIKSGAHKDIMSATRPMTEDEK 216 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 ++MQ ++D SY+ FV++V+ R + ++ ++DGRI+ G +AK+ GLID G QE+ Sbjct: 217 KIMQSMIDDSYNEFVQVVASGRGMSEEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALA 276 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 +L + I+ P + +S D L+K T Sbjct: 277 ALKKDEKLSNATVIQYDEPTSFSSLFSVAAQKMSGQSADISQLIKLT 323 >gi|254992106|ref|ZP_05274296.1| hypothetical protein LmonocytoFSL_02749 [Listeria monocytogenes FSL J2-064] Length = 337 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVHKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLAGATVIQYDAPG 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|16803625|ref|NP_465110.1| hypothetical protein lmo1585 [Listeria monocytogenes EGD-e] gi|224501475|ref|ZP_03669782.1| hypothetical protein LmonFR_02992 [Listeria monocytogenes FSL R2-561] gi|254831986|ref|ZP_05236641.1| hypothetical protein Lmon1_11555 [Listeria monocytogenes 10403S] gi|284801977|ref|YP_003413842.1| hypothetical protein LM5578_1732 [Listeria monocytogenes 08-5578] gi|284995119|ref|YP_003416887.1| hypothetical protein LM5923_1684 [Listeria monocytogenes 08-5923] gi|16411014|emb|CAC99663.1| lmo1585 [Listeria monocytogenes EGD-e] gi|284057539|gb|ADB68480.1| hypothetical protein LM5578_1732 [Listeria monocytogenes 08-5578] gi|284060586|gb|ADB71525.1| hypothetical protein LM5923_1684 [Listeria monocytogenes 08-5923] Length = 337 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLAGATVIQYDAPG 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|330994449|ref|ZP_08318374.1| Putative signal peptide peptidase sppA [Gluconacetobacter sp. SXCC-1] gi|329758449|gb|EGG74968.1| Putative signal peptide peptidase sppA [Gluconacetobacter sp. SXCC-1] Length = 342 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 147/283 (51%), Gaps = 4/283 (1%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRDDSATALI 70 ++ LSL +PH+ + ++G I D E +E + R D + L+ Sbjct: 59 WLFLSLPASWPSGVRPGGWTGHQAPHLVHLKVQGVIGADEHENVEALNRARDDAAVRGLL 118 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++SPGG+ GE + A+ RKPV+ + +AASAGY++S ++ I A ++L G Sbjct: 119 LEVNSPGGAVTGGEVLHDAVAAFARRKPVVVSMGSVAASAGYMVSTPASRIFANRSTLTG 178 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + P V P LD++GV + + S PMK +PS ++P+ M+Q VV Y +FV Sbjct: 179 SIGVILESPDVSPLLDRVGVRVDQLVSGPMKGQPSVVKPLSPEGRAMLQGVVSDLYDFFV 238 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +V++ R++P + L+DGR +TG +A +GL+D +G ++ + L + K+ Sbjct: 239 TVVAQDRHMPAGRVRELADGRPFTGQQALPLGLVDEIGNMDDARKWLVKKTILPDDAKVT 298 Query: 251 DWNP--PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 D P + W L + + + L + + + G A+W Sbjct: 299 DIGPAATRTRWQRLLSGILSVVPGAEFV-LKESSALDGAVAIW 340 >gi|212710743|ref|ZP_03318871.1| hypothetical protein PROVALCAL_01811 [Providencia alcalifaciens DSM 30120] gi|212686440|gb|EEB45968.1| hypothetical protein PROVALCAL_01811 [Providencia alcalifaciens DSM 30120] Length = 617 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 141/278 (50%), Gaps = 17/278 (6%) Query: 21 TVVYFSWSSHVEDNSP---HVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + + +S+ + D S ++A I ++G I D + L +I +D+ A Sbjct: 310 GISIYDYSTQIADTSNSEGNIAVIVVQGAIMDGPQTPGIAGGETLAAQIRDARLNDNIKA 369 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGGS A + I + + +KPV+ + MAAS GY IS ++ I+A+ ++ Sbjct: 370 IVLRVNSPGGSVSASDLIRNELAAARAAKKPVVVSMGGMAASGGYWISTPADYIIASPST 429 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + L+ +GV V +SP+ S ++P+ MMQ +++ Y Sbjct: 430 LTGSIGIFGVINTFENSLESIGVYTDGVSTSPLAGV-SVTKGISPQFADMMQITIENGYQ 488 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LV++SR+ ++ ++ GR+W G +A K+GL+D +G ++ L +S+ Sbjct: 489 TFIGLVAQSRHKTPEEIDKIAQGRVWIGKDALKIGLVDQLGDFDDAVAKAAELAQVKSVE 548 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 DW P+ F D L +++ ++ +P Q + Sbjct: 549 L--DWMQPELS-FMDQLILEVTNNVQVMMPDALQAFLP 583 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 100/274 (36%), Gaps = 48/274 (17%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------- 50 +F+ I +V+L LV S E N + ++G + D Sbjct: 24 QFIFNAIF--FVLLFLVIGAYSLLQTDSKPEKNYFGALVVDLQGIVVDQVSSPDPFGRMS 81 Query: 51 ----------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRA 89 ++++ I + DD T LI+ L + + + I +A Sbjct: 82 RELLGSSNNLMQENSLFDIVDTIRTAANDDRITGLILRLD----NLVSADQPSMAYIGKA 137 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I++ K + + + A Y ++ ++ I A VG G Y K L+KL Sbjct: 138 IEEFKASGKSVYAMGDSYTQAQYYLASFADEIYLAPHGTVGIYGFSTDTLYYKSLLEKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--- 204 VS + K+ P ++P+A + + + + ++ ++++R + Sbjct: 198 VSSHIFRVGTYKSAVEPMMRDNMSPEAREANLLWLTTLWDNYLGSIAQNRKTQAEHIFPG 257 Query: 205 --LVLSDGRIW---TGAEAKKVGLIDVVGGQEEV 233 +++ R+ T A + L+D + +E+ Sbjct: 258 ADKLIAQLRLVKGDTAQYALQQKLVDKIYTREQA 291 >gi|254824356|ref|ZP_05229357.1| peptidase [Listeria monocytogenes FSL J1-194] gi|255520878|ref|ZP_05388115.1| hypothetical protein LmonocFSL_06586 [Listeria monocytogenes FSL J1-175] gi|293593590|gb|EFG01351.1| peptidase [Listeria monocytogenes FSL J1-194] Length = 337 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLAGATVIQYDAPG 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|92113719|ref|YP_573647.1| signal peptide peptidase SppA, 36K type [Chromohalobacter salexigens DSM 3043] gi|91796809|gb|ABE58948.1| signal peptide peptidase SppA, 36K type [Chromohalobacter salexigens DSM 3043] Length = 357 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 125/246 (50%), Gaps = 13/246 (5%) Query: 7 KIKTRYVMLSLVTLTV------VYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIE 55 K+ R+V +L+ ++ V+F+ PH+ + ++G I+ ++ +IE Sbjct: 69 KLFFRFVFAALIAASLAMTTYAVFFAGRDMTGAAGPHLGVVEVQGVIDAQGEASAERIIE 128 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYL 113 + + S+ +++ ++SPGGS + ++ ++++ + KPV+ + ++ AS Y Sbjct: 129 GLRDAWKAPSSRGVVLHINSPGGSPVQSQRVYDEVRRLAAQGDKPVVAVIEDIGASGAYY 188 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 ++ A++ I A+ SLVGSIGV++ ++ +DK+GV + S KA PFS + + Sbjct: 189 MASAADDIYASPASLVGSIGVIYSGFGLQEAIDKVGVERRVFTSGDNKAFLDPFSPIRDE 248 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+D+++ F+ V R D L G IWTG +A +GL+D + + + Sbjct: 249 QRAFWQTVLDTTHRQFIDDVKAGRGERLDDDPRLFSGLIWTGEQALGLGLVDGLSSLDAL 308 Query: 234 WQSLYA 239 + + Sbjct: 309 SRERFG 314 >gi|167586612|ref|ZP_02379000.1| peptidase S49 [Burkholderia ubonensis Bu] Length = 330 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS + + H A + I G+I ++ ++ + Sbjct: 45 KIFFRFAFLGVFLLLAFALIDFSSDAKFSTSGRHTAVVTIDGEIAAGVNANADDINTALN 104 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 105 AAFDDDGTVGVVLQINSPGGSPVQAGMVYDEIKRLRAKYPGKPLYVVVTDMCASGGYYIA 164 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL ++KLG+ + S K PFS PK Sbjct: 165 AAADRIYVDKASIVGSIGVLMDGFGFTGLMNKLGIQRRLHTSGENKGFYDPFSPETPKMD 224 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG + ++GL D G + V + Sbjct: 225 THAQALLDQVHAQFIKAVKDGRGARLHETPDMFSGLFWTGEKGVELGLADGFGTTDSVAR 284 Query: 236 SLYA 239 + Sbjct: 285 DVLK 288 >gi|153005152|ref|YP_001379477.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] gi|152028725|gb|ABS26493.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] Length = 366 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 126/261 (48%), Gaps = 6/261 (2%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI------EDSQELIERIERISRDD 64 V + L P VA I ++G I D+ +++++ ++++DD Sbjct: 75 FLVFFGFLVLAYSVVKGEGPAIATGPRVAIIEVKGPIGTGAGGADADRILKQLRKVAQDD 134 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A++V + SPGG+ + + ++K+ +K V+ + +AAS G+ ++ A +VA Sbjct: 135 GLKAVVVRIDSPGGAVAPSQELHDEVKKLAQKKTVVCSMGNLAASGGFYVAVACPKVVAE 194 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +L GSIGV+ Q+P VK L++ V +++VKS +K +PF++++ + Q ++D Sbjct: 195 PGTLTGSIGVITQFPKVKGLLERWDVKMETVKSGALKDAGNPFADMSAEERAYWQSLIDR 254 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 Y FVR V++ R + +DGR+ TG EAK++ L+D +G + + Sbjct: 255 VYGQFVRAVAQGRGLEEAAVRKFADGRVITGEEAKELKLVDALGNFYDAVELAKQEAKLS 314 Query: 245 SIRKIKDWNPPKNYWFCDLKN 265 + + + L Sbjct: 315 GEPHLVYPADERGRFLEQLMG 335 >gi|161525359|ref|YP_001580371.1| peptidase S49 [Burkholderia multivorans ATCC 17616] gi|189349904|ref|YP_001945532.1| protease IV [Burkholderia multivorans ATCC 17616] gi|160342788|gb|ABX15874.1| peptidase S49 [Burkholderia multivorans ATCC 17616] gi|189333926|dbj|BAG42996.1| protease IV [Burkholderia multivorans ATCC 17616] Length = 330 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L+ L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLAVFLLLAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFEDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDSVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVIK 287 >gi|289434866|ref|YP_003464738.1| peptidase, U7 family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171110|emb|CBH27652.1| peptidase, U7 family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 337 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 17/269 (6%) Query: 31 VEDNSP-HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +E P +A +++ G I+D+ E ++++E++ D+S +++ ++S Sbjct: 55 IEKAGPSKIAVLSVDGTIQDTGESTSLLGSTGYNHSFFMDQLEQVRDDESIKGVLLYVNS 114 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I +++ + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 115 PGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 174 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ Q + KLG++ ++KS K S + ++MQ ++D SY+ FV++V Sbjct: 175 VIMQGYDYSELMKKLGITDNTIKSGAHKDIMSATRPMTEDEKKIMQSMIDDSYNEFVQVV 234 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + R + ++ ++DGRI+ G +AK+ GLID G QE+ +L + I+ Sbjct: 235 ASGRGMSEEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALAALKKDEKLSNATVIQYDE 294 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 P + +S D L+K T Sbjct: 295 PTSFSSLFSVAAQKMSGQNADISQLIKLT 323 >gi|296533548|ref|ZP_06896118.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] gi|296266118|gb|EFH12173.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] Length = 307 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 80/285 (28%), Positives = 148/285 (51%), Gaps = 6/285 (2%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R + + V + + H+AR+ + G I D ++L E + +RD + Sbjct: 25 FWRVLTVVAVLGAGALLAGRG-LPVAGGHLARLTVEGTISDDRKLTEAVLEAARDPAVRG 83 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++S+ SPGG+ GE + A+++ ++ KPV+ + M ASA Y+I+ + + A +++ Sbjct: 84 ILLSIDSPGGTVAGGEGLHAALRRFRDSGKPVVAVMRGMGASAAYMIAMPAQRVFARDST 143 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIGV+ Q LD LG+ + + S +K EP+PF + P+ ++ V+ + Sbjct: 144 LTGSIGVILQSFEASRLLDTLGIRAEMLTSGALKGEPNPFRPLTPEGRAALEAVLRDLHE 203 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 FV +V+E RN+P ++ L+DGRI+TG +A ++ LID +GG+ E L A + Sbjct: 204 QFVTIVAEGRNLPRERVAELADGRIYTGRQALELRLIDAIGGEPEARAWLAAEQDIPAST 263 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 ++D +P +S+ +L++ + + + G AVW Sbjct: 264 PVRDLDPRSAA--ERALGVSLRALMKSVVS--EWLAIDGARAVWQ 304 >gi|154246163|ref|YP_001417121.1| signal peptide peptidase SppA, 36K type [Xanthobacter autotrophicus Py2] gi|154160248|gb|ABS67464.1| signal peptide peptidase SppA, 36K type [Xanthobacter autotrophicus Py2] Length = 323 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 89/279 (31%), Positives = 153/279 (54%), Gaps = 14/279 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 V +SPHVAR+ I G I + + +E +E I R A A+I+S+ SPGG+ E +F Sbjct: 42 GDGVSASSPHVARVTIGGIIRNDRARVELLEEIGR-SRARAVILSIDSPGGTVTGSEQLF 100 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A++++ +KPV+ V +AAS Y+ + ++ IVA +LVGS+GV++QYP V L Sbjct: 101 DALRRLSEKKPVVAVVEGIAASGAYIAALGADHIVARRNALVGSVGVIYQYPNVTELLKT 160 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV+++ +KSSP+KA P+P++ P+A ++ +V SY WF LVSE R + DK + Sbjct: 161 VGVAMEDIKSSPLKASPNPYTPTTPEARAAVESLVKDSYAWFKGLVSERRKMSDDKLATV 220 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFCDL 263 +DGR++TG + + L+D +G + L K++ W + W Sbjct: 221 TDGRVFTGHQGLDLQLVDELGDERTARAWLAREKGVPENLKVRSWRTREVDSEFGWLLGA 280 Query: 264 KNLSISS---------LLEDTIPLMKQTKVQGLWAVWNP 293 ++++ L + +++ ++ GL A+W+P Sbjct: 281 ARGAVAALGFPQAAEFLTQTARGALERAQLDGLLALWHP 319 >gi|254828180|ref|ZP_05232867.1| peptidase [Listeria monocytogenes FSL N3-165] gi|258600567|gb|EEW13892.1| peptidase [Listeria monocytogenes FSL N3-165] Length = 337 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++ER+ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLERVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPTDKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLAGATVIQYNAPG 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVTAQKISGQNADISQLIKLT 323 >gi|300771388|ref|ZP_07081264.1| signal peptide peptidase SppA [Sphingobacterium spiritivorum ATCC 33861] gi|300762058|gb|EFK58878.1| signal peptide peptidase SppA [Sphingobacterium spiritivorum ATCC 33861] Length = 589 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------SQ 51 ++ V K++ + T++++ + +S + VA + G I S Sbjct: 271 IDEVKKRLNIKDKKKDFSTVSILDYRANSTTSEGEGRVAVLYAEGDIVSGEGESGQIASD 330 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ + ++ DD A++ ++SPGGSA A + I+R + K KP+I + + AAS G Sbjct: 331 KVSRELRKLREDDRVKAVVFRVNSPGGSALASDVIWREVVLTKKVKPIIVSMGDYAASGG 390 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKA-EPSPFSE 169 Y IS A++ I A + ++ GSIGV P K L DKLG+ VK+ SP Sbjct: 391 YYISAAADSIFAEKNTITGSIGVFGLIPNFKGLLNDKLGIHFDGVKTGTYADLMSSPDRP 450 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + ++Q V+ +Y F + V+E R + + GR+WTG +A ++GL+D +G Sbjct: 451 LTAEERNIIQLEVNKTYGSFTKKVAEGRKLSVANVDSIGQGRVWTGEQAVEIGLVDRIGS 510 Query: 230 QEEVWQSLYALGVDQSIRKIKD 251 + +S + + + +K Sbjct: 511 IGDAIRSAAKMAKLKDYKVVKY 532 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 112/285 (39%), Gaps = 41/285 (14%) Query: 1 MEFVLKKIKTRYV---MLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDS-- 50 +++VL I + +L +V ++ SS D +P VA I + +I++ Sbjct: 5 LKYVLATITGIVIATIILFIVIAGIIGSLISSASTDAAPVVADNSVLYITLNHEIKERSE 64 Query: 51 --------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRA 89 +++ERI+ D + +++ S + +A + I A Sbjct: 65 TNPLEGVDIPGFGTTKTLGLDDILERIQSAKSDSKIKGIYLNI-SGANTGFATLQEIRDA 123 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLD 146 + K K I E Y ++ ++ I GS+ G+ ++K LD Sbjct: 124 LIDFKASKKFIVSYSEGYTQKAYYLASVADKIYLNPE---GSLDFRGLSTSIMFMKDALD 180 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKT 204 KLGV ++ VK K+ PF +Q + S Y F+ VS SR +P D Sbjct: 181 KLGVDMQVVKVGTYKSAVEPFMLNGMSQPNRLQVESYLGSLYTTFLDNVSASRKVPVDSL 240 Query: 205 LVLSDG-RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 ++D + +A ++ L+D V ++E+ + + +K Sbjct: 241 RAIADRYAVRDAEDAVRLKLVDAVLYKDELIDEVKKRLNIKDKKK 285 >gi|313633075|gb|EFR99981.1| putative signal peptide peptidase SppA [Listeria seeligeri FSL N1-067] Length = 337 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 136/287 (47%), Gaps = 22/287 (7%) Query: 18 VTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDSQE--------------LIERI 57 + + F+ ++ + + +A +++ G I+D+ E ++++ Sbjct: 37 IAVIDTLFAGTNELTETVIEKAGPSKIAVLSVDGTIQDTGESTSLLGSTGYNHSFFMDQL 96 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLIS 115 E++ D+S +++ ++SPGG I I +++ + P + MAAS GY IS Sbjct: 97 EQVRDDESIKGVLLYVNSPGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYIS 156 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++ I A++ +L GS+GV+ Q + KLG++ ++KS K S + Sbjct: 157 APADKIFASKETLTGSLGVIMQGYDYSELMKKLGITDNTIKSGAHKDIMSATRPMTEDEK 216 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 ++MQ ++D SY+ FV++V+ R + ++ ++DGRI+ G +AK+ GLID G QE+ Sbjct: 217 KIMQSMIDDSYNEFVQVVASGRGMSEEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALA 276 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 +L + I+ P + +S D L+K T Sbjct: 277 ALKKDEKLSNATVIQYDEPTSFSSLFSVAAQKMSGQNADISQLIKLT 323 >gi|262368622|ref|ZP_06061951.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262316300|gb|EEY97338.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 343 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 23/298 (7%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE------DSQELIERI 57 + K T +L ++ S SS S H+A + I G I +S + I+ + Sbjct: 53 IFFKCLTFAYLLFILFAMTKSCSTSSTDATASKHIAVVDIVGTIAADEQSVNSDDTIKSL 112 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLI 114 ++ + + A++++++SPGGS + I++ IQ +K K + + + AS Y I Sbjct: 113 KKAFENKQSQAVVLNINSPGGSPVQSDEIWQEIQYLKKTHSDKKLYAVIGDTGASGAYYI 172 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I+ +SLVGSIGV+ V + KLGV +++ S KA S VNP Sbjct: 173 ASAADEILVNPSSLVGSIGVIMPNYGVNGLMQKLGVEDRTMTSGQNKALLSMTQPVNPAQ 232 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +Q V+D+ + F+ V + R L G WTG +A K+G+ D +G + Sbjct: 233 RAHVQGVLDNVHEHFINAVKQGRGKKLKSNDPALFSGLFWTGDQAVKLGIADRIGNLHTL 292 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS------SLLEDTIPLMKQTKVQ 285 + L + K D+ + L L S S L + + + TK+Q Sbjct: 293 KREL-------NTDKAMDYTVVHSPLDAVLGRLGTSMGAGFASSLSNQMQSEQTTKLQ 343 >gi|323142045|ref|ZP_08076893.1| signal peptide peptidase SppA, 36K type [Phascolarctobacterium sp. YIT 12067] gi|322413432|gb|EFY04303.1| signal peptide peptidase SppA, 36K type [Phascolarctobacterium sp. YIT 12067] Length = 318 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 27/307 (8%) Query: 4 VLKKIK-TRYVMLSLVTLTVVYFSWSSHVEDN---SPHVARIAIRGQIEDSQE------- 52 +LKKI + ++L++++ V +++ E VA I I G I + Sbjct: 1 MLKKIFISAVLILAVLSFVVSLLKGNNNAEKTVTVPDRVAVINIYGTIISGADSKDNIFS 60 Query: 53 ---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVIT 101 ++++I + DDS AL++ + S GGSA A E + R +++ K + KP++ Sbjct: 61 QTNGVTSGSIMKQIREAAADDSVKALVLRIDSGGGSATAAEEVGRELKRFKEKTKKPIVA 120 Query: 102 EVHEMAASAGYLIS-CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + ASA Y I+ CAS+ + A T+L GSIGV Y + K+G++ +KS P Sbjct: 121 TIGNTGASAAYWIAVCASDKVYANATTLTGSIGVYMPYMNTEELFKKIGITSNKIKSGPY 180 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K S + P+ ++Q++V+ Y FV V+ R + K L+DGR++TG +AK Sbjct: 181 KDIMSSDRPMTPEEQAILQNIVNEIYEQFVTTVAVGRKMEESKVKSLADGRVYTGLQAKN 240 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK-NLSISSLLEDTIPLM 279 +GL+D +G + + LG I+ D PP +S+ + + I Sbjct: 241 LGLVDEIGDYYDALAAAGELG---KIKPGADGLPPVKAKEKQQPWEFLLSAHIAELIKTE 297 Query: 280 KQTKVQG 286 ++ G Sbjct: 298 LVNQLTG 304 >gi|116873014|ref|YP_849795.1| protease/peptidase protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741892|emb|CAK21016.1| protease/peptidase protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 338 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 138/275 (50%), Gaps = 20/275 (7%) Query: 31 VEDNSPH-VARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +ED P+ +A +++ G I+D+ E ++++E++ D+S +++ ++S Sbjct: 56 IEDAGPNKIAVLSVDGTIQDTGETSSIFGSEGYNHSFFMDQLEQVRDDESIKGVLLYVNS 115 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I +++ + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 116 PGGGVMESAQIRDKILQIQKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 175 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ Q + KLG+S ++KS K S + + ++MQ ++D SY+ FV++V Sbjct: 176 VIMQGYDYSELMKKLGISDNTIKSGAHKDIMSATRPMTEEEKKIMQSMIDDSYNEFVKVV 235 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + R++ ++ ++DGRI+ G +AK+ GLID G QE+ ++L + I+ Sbjct: 236 ASGRDMSEEQVRKIADGRIYDGRQAKENGLIDAFGYQEDALEALKKEKKLSNASVIQYDE 295 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 P F L + + + + + K+ G Sbjct: 296 P---TGFSSLFSATAQKITGQNTDITQLIKLTGTL 327 >gi|47096798|ref|ZP_00234380.1| peptidase, U7 family [Listeria monocytogenes str. 1/2a F6854] gi|254898248|ref|ZP_05258172.1| hypothetical protein LmonJ_00495 [Listeria monocytogenes J0161] gi|254912259|ref|ZP_05262271.1| peptidase [Listeria monocytogenes J2818] gi|254936586|ref|ZP_05268283.1| peptidase [Listeria monocytogenes F6900] gi|47014831|gb|EAL05782.1| peptidase, U7 family [Listeria monocytogenes str. 1/2a F6854] gi|258609182|gb|EEW21790.1| peptidase [Listeria monocytogenes F6900] gi|293590236|gb|EFF98570.1| peptidase [Listeria monocytogenes J2818] Length = 337 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE ++L I+ P Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQENALEALKKEQGLAGATVIQYDAPG 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVTAQKISGQNADISQLIKLT 323 >gi|311695110|gb|ADP97983.1| family S49 unassigned peptidase [marine bacterium HP15] Length = 347 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 15/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K T +++L+ L + + S H A + I G I + ++ + Sbjct: 64 IFFKFLTFGYLIALLFL-IKFPLGDSLEGVTGKHTALVEINGPIAADELASADNIVGSLR 122 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 + ++ A+I+ ++SPGGS ++ I++++ K V + ++ AS Y I+ Sbjct: 123 TAFEEPNSVAVILRINSPGGSPVQSGYVYDEIKRLREEYPEKKVYAVISDIGASGAYYIA 182 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A SLVGSIGV+ ++K+GV + + KA PFS + V Sbjct: 183 AAADEIYANRASLVGSIGVVAGGFGFTEVMEKIGVDRRLYTAGENKAFLDPFSPEQEEEV 242 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q V+++++ F+ V + R L G +W+G +A ++GL D +G V + Sbjct: 243 TFWQSVLENTHQQFIEAVKQGRGDRLADDERLFSGLVWSGEQAVELGLADGLGSASHVAR 302 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + ++ D++ K+ + + L ++ Sbjct: 303 QIIG------QEELVDYSRRKSPFQDIVDQLGVA 330 >gi|300691993|ref|YP_003752988.1| peptidase S49 [Ralstonia solanacearum PSI07] gi|299079053|emb|CBJ51715.1| Peptidase S49 [Ralstonia solanacearum PSI07] Length = 378 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVT-LTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L+++ L V S+ + H A + + G+I + + +E Sbjct: 92 RIFFRFVTLAIIGGLLYVLASFEGETVSSGRHTALVTLDGEIAANTNASADNINASLEAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKYKNIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGTNKGMLDPFSPVPPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTGA+A ++GL D +G + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGAKAVELGLADGIGSADFVARNV 331 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 332 I------KAPDMVDYTVKENFAERVARKFGTAMGAGAIKALAATGELKLLM 376 >gi|298372905|ref|ZP_06982895.1| signal peptide peptidase SppA, 67K type [Bacteroidetes oral taxon 274 str. F0058] gi|298275809|gb|EFI17360.1| signal peptide peptidase SppA, 67K type [Bacteroidetes oral taxon 274 str. F0058] Length = 582 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 73/250 (29%), Positives = 134/250 (53%), Gaps = 9/250 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGS 79 S H + +A + G+I+ +SQ++++ + ++ DD A+++ ++SPGGS Sbjct: 294 SKHKSRSKNKIAVLYAVGEIDGSDERSGINSQKIVDELIDLADDDKIKAVVLRVNSPGGS 353 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+ E I++A+ KVK RKPV+ + + AAS GY ISC ++ I A T+L GSIG+ +P Sbjct: 354 AFGSEQIWQAVGKVKARKPVVVSMGDYAASGGYYISCIADRIFAEPTTLTGSIGIFGMFP 413 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S +SVK++ + + + + ++Q ++ Y F + ++ R + Sbjct: 414 NVKGLFDKIGLSFESVKTNKFSDFGATYRPMAAEEKVLLQKYIEKGYDLFTKRCADGRGM 473 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D +++GRI++G++A ++GL+D +GG E IK++ K Sbjct: 474 SQDSIKKIAEGRIYSGSDALQLGLVDELGGLNEAIAFAAKQAKVDEYS-IKNYPAVKTVM 532 Query: 260 FCDLKNLSIS 269 + S S Sbjct: 533 EQLTEMFSTS 542 Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 97/259 (37%), Gaps = 37/259 (14%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 +V+L + V S + + V + ++G + + Sbjct: 22 WVLLFFAMIGVAMSSSKNTAPISENTVFELELKGNLVERAEEDIWTSIAAEMNSSQRQIA 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRKPVITEVHE 105 +++E IE+ + +D + + + G+ A + I+R + + K I + Sbjct: 82 LDDIVESIEKAAGEDKIKGIYLKI----GNLSASMASLQQIYRCLGQFKKSGKFIVAYGD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + Y ++ ++ + + G+ + K LDKLGV ++ K K+ Sbjct: 138 YYGNGTYYLASIADKVYLNPEGTLALSGLQASTMFYKNLLDKLGVDMQIFKVGTFKSAVE 197 Query: 166 PFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKV 221 PF++ + +Q ++S + V+++R D +D ++ G E K Sbjct: 198 PFTQTSMSEANKLQLTAYINSLWKEITTSVAQNRATTVDNINAFADSGLFFGEAMETVKY 257 Query: 222 GLIDVV---GGQEEVWQSL 237 LID + + + ++L Sbjct: 258 KLIDSLVYQSDMDSIIKAL 276 >gi|182415685|ref|YP_001820751.1| signal peptide peptidase SppA, 67K type [Opitutus terrae PB90-1] gi|177842899|gb|ACB77151.1| signal peptide peptidase SppA, 67K type [Opitutus terrae PB90-1] Length = 656 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 10/237 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSPGGSAY 81 S VA + G I D + + R+ +DDS A+++ ++SPGGSA Sbjct: 364 SSRSGRVAVVYAEGDIVDGEGNEQGEIGGTRFSRELRRLRQDDSVKAIVLRVNSPGGSAS 423 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A E I R I+ + KPVI + AAS GY IS + I A T++ GSIGV V Sbjct: 424 ASETIQREIRLAREVKPVIVSMGSYAASGGYWISAYGDRIFAEPTTVTGSIGVFGIMFDV 483 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + G++ SVK+ + P+ + + Q VD Y FV V E R++ Sbjct: 484 QKLFNGWGLTFDSVKTGRFADTLTIARPKTPEEMALFQRSVDWIYDQFVSKVVEGRHLAR 543 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + ++ GR+W+G EAKK+GL+D +GG + + S ++ ++ K + Sbjct: 544 EHVEEIAQGRVWSGVEAKKLGLVDELGGLDAAIRYAAGRAGLGSDYRLVEYPRKKEF 600 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 97/244 (39%), Gaps = 19/244 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSP 76 + F SS + D P I R D + + + ++DD + + P Sbjct: 49 LVFDLSSAITDAPP---VIDFRALGSDHKPTLQLRTVTRTLRAAAKDDRIAGIFIFGDVP 105 Query: 77 GGSAY--AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 G A + + A+ + K KPV + A + Y ++ ++ + + G Sbjct: 106 AGGPGYGALKEVRAALNQFKASGKPVKAYL-TYATTKNYYLASVADELTIDPYGTIIMPG 164 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVR 191 + Q ++ +K G+ ++ + K+ PF+ +++P+ +Q ++D + +R Sbjct: 165 LASQPMFLAGAFEKYGIGVQVTRVGKYKSAVEPFTRTDMSPENRAQIQKLLDDVWAGLLR 224 Query: 192 LVSESRNIPYDKTLVL--SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK 248 ++ SR + + ++G I AK L+D + ++E+ L + G D S Sbjct: 225 DMAGSRKLKSNAIQATVDAEGLI-RADAAKAANLVDRIAYRDEIIGELKRITGRDNSKES 283 Query: 249 IKDW 252 K Sbjct: 284 FKQI 287 >gi|241202814|ref|YP_002973910.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856704|gb|ACS54371.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 316 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 116/296 (39%), Positives = 186/296 (62%), Gaps = 13/296 (4%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R + ++L+ L ++ ++ PH+A + I G I D EL+ER++++ D Sbjct: 18 FWRVIAVALIVALGFAFYRFALGDAGTERPHIAHVTISGLIVDDDELLERLKKVEISDQV 77 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++ Sbjct: 78 KAVVISISSPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDS 137 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 138 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSY 197 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV LV++ R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L + GVD + Sbjct: 198 NWFVDLVADRRKLPRDEVLKLADGTIYTGRQALKVKLVDAIGGEAEIRAYLTSRGVDSDL 257 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK----------QTKVQGLWAVWN 292 + DW+ N F +S + LMK + + GL +VW Sbjct: 258 PMV-DWDKKSNTPFLLAGAVSRLITIFGYDDLMKTQDINGILPPKLLLDGLLSVWQ 312 >gi|239908953|ref|YP_002955695.1| putative signal peptide peptidase SppA [Desulfovibrio magneticus RS-1] gi|239798820|dbj|BAH77809.1| putative signal peptide peptidase SppA [Desulfovibrio magneticus RS-1] Length = 312 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 136/265 (51%), Gaps = 8/265 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSP-------HVARIAIRGQIEDSQELIERIERISRDD 64 + LV F H E+ + + + G I D++E++ I ++ DD Sbjct: 22 VAAVILVFGIAAAFGVFGHDEEGESLLGLAEARIGVVRVEGPINDAEEVVAFIRKLREDD 81 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + +I+ ++SPGG+ + ++ A+++++ +KPV+ +AAS GY +CA++ I + Sbjct: 82 TVKGVILRINSPGGAFGPSQEMYMAVKRLRAKKPVVASFSAVAASGGYYAACAADRIFSN 141 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S+ GSIGV+ Q + + KLG+S+ S+ + +K SPF +++ + ++ +++ Sbjct: 142 PGSITGSIGVITQLANARELMQKLGLSMDSLTTGKLKDAGSPFKQLSDEQRAYLEGLIND 201 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVD 243 F V++ R + + +++DGR TGA A+ +GL+D +GGQE+ L LG+ Sbjct: 202 LNAQFSGDVAKERKLTPEAVALIADGRAMTGARAQAIGLVDELGGQEDAVGYLKKELGLK 261 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSI 268 + K +++ +L + Sbjct: 262 GEVPLFKGPKKKNSFFEKLSSSLPL 286 >gi|221201332|ref|ZP_03574371.1| peptidase S49 [Burkholderia multivorans CGD2M] gi|221208812|ref|ZP_03581810.1| peptidase S49 [Burkholderia multivorans CGD2] gi|221171268|gb|EEE03717.1| peptidase S49 [Burkholderia multivorans CGD2] gi|221178600|gb|EEE11008.1| peptidase S49 [Burkholderia multivorans CGD2M] Length = 330 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLVTLT---VVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L++ L ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLAVFLLFAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFEDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDSVAR 283 Query: 236 SLYA 239 + Sbjct: 284 EVIK 287 >gi|313675194|ref|YP_004053190.1| signal peptide peptidase sppa, 67k type [Marivirga tractuosa DSM 4126] gi|312941892|gb|ADR21082.1| signal peptide peptidase SppA, 67K type [Marivirga tractuosa DSM 4126] Length = 597 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 10/248 (4%) Query: 34 NSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 NS +A I G I S + I + DD A+++ ++SPGGSA A + Sbjct: 311 NSNRIAVIVAEGNIVSGKGGDGAIGSDVFAKEIRKARLDDKIKAIVLRINSPGGSALASD 370 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++R ++ K KPVI + +AAS GY ++ A + IVA ++ GSIG+ P + F Sbjct: 371 VMWREVKLAKKVKPVIASMSSVAASGGYYMAMACDTIVAQPNTITGSIGIFAIIPDLSKF 430 Query: 145 LD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +D KLG++ V + + +N +++Q+ V+ Y F +E RN+ D+ Sbjct: 431 MDTKLGITFDRVSTGEYSDLYTVTRSLNEAEKRIIQNSVERGYEDFTSKAAEGRNMQIDE 490 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L ++ GR+W+G EAK GL+DV+GG ++ + +K + P K + L Sbjct: 491 LLAVASGRVWSGIEAKDNGLVDVLGGFDDAVNIAANSAGLEEGDYMKVYYPEKKPFIQQL 550 Query: 264 KNLSISSL 271 N SS Sbjct: 551 LNEMGSSA 558 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 16/219 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSP----GGSAYAGEAIFRAIQKVKNR-KPVITEVHE 105 ++++E IE D+ + L +P G E I A+ K KPV+ Sbjct: 92 KDILESIEHAKTDEKIKGI--YLDAPFVLAG--FAQMEEIRNALINFKESGKPVLAYAEA 147 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + Y ++ ++ IV ++ G+ + + K L+KL V + + K+ Sbjct: 148 FTETG-YYVASVADNIVLNPAGMLDMSGLSSEVTFFKGTLEKLKVEPQIFRVGTFKSAVE 206 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVG 222 PF +++ + + + +++S Y F+ +++SR I + +SD ++ T +A Sbjct: 207 PFIRKDMSEASKEQISVLLNSVYGVFIENIAKSRGIDAKELRAISDQLKVRTTEDALNFK 266 Query: 223 LIDVVGGQEEVW---QSLYALGVDQSIRKIKDWNPPKNY 258 L+ +G +EV + + LG D I K++ Sbjct: 267 LVTQLGYYDEVLTKMREIAGLGEDAKIPVASVKKYSKSF 305 >gi|118593739|ref|ZP_01551108.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Stappia aggregata IAM 12614] gi|118433649|gb|EAV40312.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Stappia aggregata IAM 12614] Length = 328 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 172/303 (56%), Gaps = 12/303 (3%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + +I T V+ + + ++Y S S + + H+ARI I G I +S++ ++ I++I Sbjct: 17 KVTFWRIATFVVIAAALIGGLLYVSGGSELSKRTAHIARIPIEGVILESRKTLQMIDKIG 76 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + D+ +++S++SPGGS GEA++ A++K+ +KPV+ E+ + SAGY+I+ AS+ I Sbjct: 77 KSDAVKGVVISINSPGGSTTGGEALYEALRKLSEKKPVVAEIRTIGTSAGYMIALASDHI 136 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA S+ GSIGVLFQ+ + ++ +GV + +VKS+P+KAEP +S+ +P+A M+Q + Sbjct: 137 VARYNSITGSIGVLFQFGNISKLMETVGVEMDAVKSAPLKAEPDFYSQTSPEARAMLQKL 196 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V++SY WFV LV+E R++ + L+DGRI TG +A L+D +GG++ L + Sbjct: 197 VNNSYDWFVSLVAERRSLAPPRAKELADGRILTGHDALTEKLVDAIGGEDAAIDWLVSEK 256 Query: 242 VDQSIRKIKDWN--------PPKNYWFCDLKNLSISSLLEDTIPLM----KQTKVQGLWA 289 + W+ P + + S+LLE + + GL + Sbjct: 257 GVAKDLPVVTWSTNDNLEELPFSSRVSREFGKGIGSALLEPVSEAKGLIPRGLTLDGLVS 316 Query: 290 VWN 292 VW Sbjct: 317 VWQ 319 >gi|126663145|ref|ZP_01734143.1| putative protease IV [Flavobacteria bacterium BAL38] gi|126624803|gb|EAZ95493.1| putative protease IV [Flavobacteria bacterium BAL38] Length = 588 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 139/286 (48%), Gaps = 13/286 (4%) Query: 17 LVTLTVVYFSWSSHVED--NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDS 65 +V++T +S VED +A I +G+I + + ++ DD Sbjct: 281 IVSITDYAQKAASTVEDYSKEDIIAVIYAQGEIAGGEGDVNIIGEGSINRSLKEAREDDD 340 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++SPGGSA E I+R I+ K KPV+ + AAS GY I+ ++ I A Sbjct: 341 VKAIVLRVNSPGGSALTSELIWREIEITKKVKPVVVSMGNYAASGGYYIAANADRIFAEP 400 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGV P + +G++ + VK+ + S F ++ + + ++ Sbjct: 401 NTITGSIGVFGMLPNMSQLSKNIGINAEQVKTHENASGYSIFEPIDENFKGFVLESIEKI 460 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F++ V++ R + ++ +++ GR+WTG +A K+GL+D +GG + + LG S Sbjct: 461 YATFLKRVADGRKMTTEQVDLIAQGRVWTGIDAHKLGLVDEIGGLDAAIKYAAKLGKTNS 520 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK-QTKVQGLWAV 290 R +++ + + L N + ++ + L+K Q +G + Sbjct: 521 YR-TENFPEYEKSFEDMLANFTGMAMFKTKEQLLKEQLGEEGFQML 565 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 86/207 (41%), Gaps = 12/207 (5%) Query: 52 ELIERIERISRDDSATAL-IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ IE D+ + I++ S G A +A+ + + K + + Sbjct: 79 DILNAIEAAKNDNKIKGISILNNQSQLGLA-QSKAVRDKLDEFKKSGKFVYSYSNGYSQG 137 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ ++ + + G+ + Y+K +K GV ++ ++ K+ P+ Sbjct: 138 EYYLNSVADQVYLNPMGEIDFKGLSAEILYMKELQEKAGVKMEVIRHGKFKSAVEPYLAQ 197 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLID 225 E++P+ + M +++S ++ V +S+SR + + +++ R T A LID Sbjct: 198 EMSPENREQMTVLLNSVWNTIVTDISKSRKLSIAQLDAIANSLGAR--TPELALANKLID 255 Query: 226 VVGGQE---EVWQSLYALGVDQSIRKI 249 + ++ + ++ L + + Sbjct: 256 KIAYEDEYHDAIRAKLKLDKKEKYDIV 282 >gi|17545763|ref|NP_519165.1| protease transmembrane protein [Ralstonia solanacearum GMI1000] gi|17428057|emb|CAD14746.1| putative protease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 378 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L ++ + F S+ + H A + + G+I + + +E Sbjct: 92 RIFFRFVTLGIIGGLLYLFASFEGETVSSGRHTALVTLDGEIAANTNASADNINASLEAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKYKNIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGTNKGMLDPFSPVAPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTGA+A +GL D +GG + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGAKAVDLGLADGIGGTDFVARNI 331 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 332 I------KAPDLVDYTVKENFAERVARKFGTAMGAGAIKALAATGQLKLLM 376 >gi|298505345|gb|ADI84068.1| peptidase, S49 family [Geobacter sulfurreducens KN400] Length = 293 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 135/283 (47%), Gaps = 7/283 (2%) Query: 8 IKTRYVMLSLVTLTVV------YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + +++L+ L + ++G I DSQE +++++ + Sbjct: 7 LIAGVTLVALIILFTFSVQMARILMGDMTAATIGDGIGYAEVKGPIIDSQETVKQLDDLR 66 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + S A+++ + SPGG + I+ A++++ K V+ + +AAS GY ++ + +I Sbjct: 67 KKSSVKAVVLRVESPGGVIGPSQEIYAAVKRLAATKKVVVSMGSVAASGGYHVAVPAAVI 126 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++ GSIGVL + ++ +DK+G+ ++KS K SP ++ + ++Q V Sbjct: 127 YANPGTITGSIGVLMKLSNIEGLMDKVGLKAFTLKSGKFKDSGSPVRKLTEEERAVLQGV 186 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D+ + FVR V+E R +P ++ L+DGR++TG +A ++ L+D +G + L Sbjct: 187 IDNLHDQFVRAVAEGRQLPVEEVRRLADGRVYTGEQALRLKLVDRLGTLHDAVMEAGRLA 246 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + + P K D+ ++ + ++ + Sbjct: 247 GIEGEPTLI-IPPKKRKLLRDMLFGEVAEAVRGSVRKEEGLSF 288 >gi|70729174|ref|YP_258910.1| signal peptide peptidase SppA, 36K type [Pseudomonas fluorescens Pf-5] gi|68343473|gb|AAY91079.1| signal peptide peptidase SppA, 36K type [Pseudomonas fluorescens Pf-5] Length = 329 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 122/276 (44%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + + + L + + + A I + G I D + ++ + Sbjct: 43 IFFKLLTFVYLFAALALFTPLMTMEKNATRGGSYTAVIDVTGVIADKESASADNIVGSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ V + ++ AS Y I+ Sbjct: 103 TAFDDPKVKGIVLRINSPGGSPVQSGYVYDEIRRLRALHKDTKVYAVISDLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S K+ PF P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRTYTSGEHKSFLDPFQPQKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + L G +W+G +A ++GLID +G V Sbjct: 223 QFWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLVWSGEQALQLGLIDGLGNTSSV 282 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + +++ D+ ++ + K L S Sbjct: 283 ARDVIG------EKEVVDFTVQESPFDRFSKKLGAS 312 >gi|134095273|ref|YP_001100348.1| putative signal peptide peptidase [Herminiimonas arsenicoxydans] gi|133739176|emb|CAL62225.1| Putative peptidase S49 [Herminiimonas arsenicoxydans] Length = 334 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 16/273 (5%) Query: 8 IKTRYVMLSLVTLTVV--YFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 I ++ L L+ + + S +E+ PH A I I G IE D++ +I + + Sbjct: 51 IFFKFTTLLLIAFALWTSFGPSVSDMENVGPHTALIKIEGTIEAKGAGDAETVISALTKA 110 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCA 117 D + LI+ ++SPGGS I I +++ +KP+ V+E+ AS GY I+ A Sbjct: 111 YADPGSVGLILQINSPGGSPVQAGIINDEITRLRKKYPKKPLYVVVNEICASGGYYIASA 170 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL ++KLGV + + + K PFS K + Sbjct: 171 ADRIYVNKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPQTEKQKEY 230 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q +++ + F+ +V R +T + G W+GA++ ++GL D G E V + Sbjct: 231 AQGMLNEIHQQFIDVVRTGRGKRLKETPEIFSGLFWSGAKSVELGLADGFGTVESVARD- 289 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + I D+ + L+ ++ Sbjct: 290 -----EFKATNIVDYTQREGLSDRVLRKFGAAA 317 >gi|15615760|ref|NP_244064.1| proteinase IV [Bacillus halodurans C-125] gi|14548271|sp|Q9K809|SPPA_BACHD RecName: Full=Putative signal peptide peptidase sppA gi|10175821|dbj|BAB06917.1| proteinase IV [Bacillus halodurans C-125] Length = 331 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 18/278 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPG 77 D +A + + G I+D+ ++ ++++E+ D + +I+ +++PG Sbjct: 52 TDFGKSIAILELSGVIQDTGSAPSLLNTGVYHHRDFLKQLEKAGEDPNIAGIILQVNTPG 111 Query: 78 GSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I + ++++ + KPV + MAAS GY IS + I A ++ GSIGV+ Sbjct: 112 GGVLESAEIHKQVEEIVQDSEKPVYVSMGNMAASGGYYISAPATKIYAHPQTITGSIGVI 171 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + + LG+ + KS P K S EV + ++Q +VD Y FVR++ + Sbjct: 172 MQSIDISGLAENLGIEFNTFKSGPYKDILSQTREVTDEEEDILQTLVDEMYDEFVRVIVD 231 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNP 254 R + + L+DGRI+TG++A GL+D +GG ++V +S+ LG D ++ + + Sbjct: 232 GRGMSETEVRELADGRIYTGSQAVATGLVDELGGLDDVIESMKEDLGADYNVIRYEHSLG 291 Query: 255 PKNYWFCDLKN-LSISSLLEDTIPLMKQTKVQGLWAVW 291 +++ LS S L+ L+ Q+ L ++ Sbjct: 292 LYDFFSMSTNRLLSPSYELQSIERLLNQSNTPTLQYLY 329 >gi|293395880|ref|ZP_06640162.1| signal peptide peptidase SppA [Serratia odorifera DSM 4582] gi|291421817|gb|EFE95064.1| signal peptide peptidase SppA [Serratia odorifera DSM 4582] Length = 622 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 22/278 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + D +A + G I D ++ + D A+++ + Sbjct: 317 IYDYQPAPAADQGGQIAVVFANGAIMDGPQTPGTVGGDTTAAQLRQARLDPKIKAVVLRV 376 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + V+ KPV+ + MAAS GY IS +N IVA+ ++L GSI Sbjct: 377 NSPGGSVSASEVIRSELAAVRAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSI 436 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + LD +GV V +SP+ + + P+ QMMQ +++ Y F+ L Sbjct: 437 GIFGVINTYQDTLDSVGVHTDGVATSPLAD-LAVTKALPPEFAQMMQLNIENGYKNFIDL 495 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ +R + ++ ++ G +WTG +AK GL+D +G ++ Q L K+K W Sbjct: 496 VAGARKMSPEQVDKIAQGHVWTGGDAKNNGLVDQLGDFDDAVQKAAELA------KLKQW 549 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 + WF D +L+ + S +I M +Q + Sbjct: 550 H---LNWFVDSPSLADMVLSQFGVSIHAMLPAALQSML 584 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 101/270 (37%), Gaps = 43/270 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDS--------- 50 + F+ + I +++L ++ +YFS+ +P A + + G + D Sbjct: 24 LNFIRELILNLFLLLLILVGVGIYFSFQGSAPAETPRGALLVNLSGVVVDQPSMKNRLLQ 83 Query: 51 ------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQ 91 ++++ I D + T +++ L+ G+ + I +A++ Sbjct: 84 RSREFLGASASELQENSLFDVVDSIRSAKDDKNITGMVLQLNDFAGADQPSLQYIGKALR 143 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + ++ KP+ + Y ++ +N I + V G Y K LDKL V Sbjct: 144 EFRDSGKPIYAIGDSYNQT-QYYLASFANKIYLSPQGNVDLHGFATNNLYYKSLLDKLKV 202 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ P +++P A + + + + ++ V+ +R I + + Sbjct: 203 TTNIFRVGTYKSAVEPMIRDDMSPAAREADSRWIGNLWQNYLTTVAANRQITTAQLFPGA 262 Query: 209 DGRIWTGAE---------AKKVGLIDVVGG 229 G + +G + A L+D + Sbjct: 263 AG-VLSGLQAAGGDTAKYALDGKLVDELAS 291 >gi|313623585|gb|EFR93759.1| putative signal peptide peptidase SppA [Listeria innocua FSL J1-023] Length = 337 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 19/273 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ E ++++E + +D+ +++ ++SPG Sbjct: 57 EGGADTIAVLSVDGTIQDTGEAGSLFSETGYNHTFFMDQLEEVRNNDAIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I ++K + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIKKERKIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + + ++MQ ++D SY+ FV++V+ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGAYKDIMSGTRPMTDEEKKIMQSMIDDSYNEFVKVVAT 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L + I+ P Sbjct: 237 GRGMSEEQVRKIADGRIYDGRQAKENGLIDAFGYQEDALEALKKEKDLKDATVIQYDAPE 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 F L +++ + + + K+ G Sbjct: 297 S---FSSLFSVAAQKMTGQNADITQLIKLTGTL 326 >gi|313892633|ref|ZP_07826220.1| signal peptide peptidase SppA, 36K type [Dialister microaerophilus UPII 345-E] gi|313119030|gb|EFR42235.1| signal peptide peptidase SppA, 36K type [Dialister microaerophilus UPII 345-E] Length = 316 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 135/270 (50%), Gaps = 22/270 (8%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVE-----DNSPHVARIAIRGQI-------------- 47 KI +++ + V+ F V +N+ +VA + I G I Sbjct: 8 KITLAVIIVLFILAIVINFVGMKDVSSFANKNNNKYVAVVRIDGPIYGGDVNQNMLGGVS 67 Query: 48 -EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHE 105 S++++ + +RD +A A+++ ++SPGG+ A + I I KV+N KPVI + + Sbjct: 68 GSSSEDIMYELREATRDPNAKAVLLRINSPGGTTGATQEIAEEIDKVRNSGKPVIVSMGD 127 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 ASAGY ++ + I A+ ++ GSIGV Y V +DKLGV + +KS K S Sbjct: 128 TCASAGYWLASKGDYIFASPATITGSIGVYMDYTNVSELMDKLGVKNEKIKSGTHKDILS 187 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + + ++Q +VD Y+ FV+ +++ R++ K ++DGRI TG +A+ GL+D Sbjct: 188 MYRPITDEEKTILQKMVDDIYNQFVQTIADGRHLEEAKVREIADGRILTGKQAQAYGLVD 247 Query: 226 VVGGQEEVWQSLY-ALGVDQSIRKIKDWNP 254 +G + +G++ + + ++ Sbjct: 248 AMGNYYDALTYAGNRVGINSDVIPTRSYSK 277 >gi|315282522|ref|ZP_07870914.1| putative signal peptide peptidase SppA [Listeria marthii FSL S4-120] gi|313613825|gb|EFR87577.1| putative signal peptide peptidase SppA [Listeria marthii FSL S4-120] Length = 337 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 131/267 (49%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGMDTIAVLSVDGTIQDTGDSGSLFGDTGYNHSLFMQQLEQVRNDDLIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I ++K + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIKKERGIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQSYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R++P ++ ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRDMPVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEPGLSDATVIEYSAPE 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|195953570|ref|YP_002121860.1| signal peptide peptidase SppA, 36K type [Hydrogenobaculum sp. Y04AAS1] gi|195933182|gb|ACG57882.1| signal peptide peptidase SppA, 36K type [Hydrogenobaculum sp. Y04AAS1] Length = 282 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 140/269 (52%), Gaps = 8/269 (2%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 +K + L ++ + + F++ + SP++A I +RG I + + ++IE+ +D + Sbjct: 2 VKRVLIFLGVIFVFSLVFAF---LNRRSPNIAIIRVRGVILNPLPIEKQIEKAQKDPNIK 58 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAET 126 AL++ + SPGG+ A + I+RA++ + +KP++ + +AAS GY IS +N I A Sbjct: 59 ALVLRVDSPGGAVGAAQEIYRALEIFRAHKKPIVVSMGSLAASGGYYISAPANYIYANPG 118 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L SIGV+ Y K L K+GV +K+ K P+ +++ +Q ++D++Y Sbjct: 119 TLTASIGVIIDYLNYKDLLKKIGVEQGDIKTGQYKDILVPWKKLSKDDKAYLQYLIDNTY 178 Query: 187 HWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 F+ + R I + L ++DGR+ TG +AK+VGL+D +G E+ + L + Sbjct: 179 EQFINAILAYRSNKISKQELLSIADGRVLTGVQAKEVGLVDGIGNLEDAIKKAAELAHIK 238 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + + + + +L S L+ Sbjct: 239 --HPVVVFYKKEKPFLKELMESSFGGTLD 265 >gi|39996336|ref|NP_952287.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] gi|39983216|gb|AAR34610.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] Length = 260 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 128/250 (51%), Gaps = 1/250 (0%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + ++G I DSQE +++++ + + S A+++ + SPGG + I+ A++++ Sbjct: 7 GDGIGYAEVKGPIIDSQETVKQLDDLRKKSSVKAVVLRVESPGGVIGPSQEIYAAVKRLA 66 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 K V+ + +AAS GY ++ + +I A ++ GSIGVL + ++ +DK+G+ + Sbjct: 67 ATKKVVVSMGSVAASGGYHVAVPAAVIYANPGTITGSIGVLMKLSNIEGLMDKVGLKAFT 126 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS K SP ++ + ++Q V+D+ + FVR V+E R +P ++ L+DGR++T Sbjct: 127 LKSGKFKDSGSPVRKLTEEERAVLQGVIDNLHDQFVRAVAEGRQLPVEEVRRLADGRVYT 186 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 G +A ++ L+D +G + L + + P K D+ ++ + Sbjct: 187 GEQALRLKLVDRLGTLHDAVMEAGRLAGIEGEPTLI-IPPKKRKLLRDMLFGEVAEAVRG 245 Query: 275 TIPLMKQTKV 284 ++ + Sbjct: 246 SVRKEEGLSF 255 >gi|315303364|ref|ZP_07873981.1| putative signal peptide peptidase SppA [Listeria ivanovii FSL F6-596] gi|313628267|gb|EFR96783.1| putative signal peptide peptidase SppA [Listeria ivanovii FSL F6-596] Length = 337 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 20/275 (7%) Query: 31 VEDNSP-HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSS 75 +ED P +A +++ G I+D+ E ++++E+I D+S +++ ++S Sbjct: 55 IEDAGPSKIAVLSVDGTIQDTGESSSLFGDAGYNHTFFMDQLEQIRDDESIRGVLLYVNS 114 Query: 76 PGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I I ++K + P + MAAS GY IS ++ I A++ +L GS+G Sbjct: 115 PGGGVMESAQIRDKILQIKKERSIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLG 174 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ Q + KLG+S ++KS K S + ++MQ ++D SY+ FV++V Sbjct: 175 VIMQGYDYSELMKKLGISDNTIKSGTHKDIMSATRPMTEDEKKIMQSMIDDSYNEFVQVV 234 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + R + ++ ++DGRI+ G +AK GLID G QE+ +L + ++ Sbjct: 235 ASGRGMSEEQVRKIADGRIYDGRQAKANGLIDEFGYQEDALAALKKEEKLSNASVVQYDE 294 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 P F +++ + + + K+ G Sbjct: 295 PTS---FGSFFSVATQKMTGQNADITQLIKLTGTL 326 >gi|209547656|ref|YP_002279573.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533412|gb|ACI53347.1| signal peptide peptidase SppA, 36K type [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 316 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 117/296 (39%), Positives = 187/296 (63%), Gaps = 13/296 (4%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R V ++L+ L + ++S++ + PH+A + I G I D EL+ER++++ D Sbjct: 18 FWRIVAVALIVALGLAFYSFAFGNAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQV 77 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++ Sbjct: 78 KAAVISISSPGGTTYGGEKIFKAIRAIAAKKPVVSDVRTLAASAGYMIATAGDTIIAGDS 137 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 138 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSY 197 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV LV++ R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L + GVD + Sbjct: 198 NWFVDLVADRRKLPRDEVLKLADGTIYTGRQALKVKLVDTIGGEPEIRAYLKSRGVDADL 257 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK----------VQGLWAVWN 292 + DW+ N F +S + L+K + GL +VW Sbjct: 258 PMV-DWDKKSNTPFLLAGAVSRLITIFGYDDLLKGQDINGILPPKLLLDGLLSVWQ 312 >gi|255691166|ref|ZP_05414841.1| signal peptide peptidase SppA, 67K type [Bacteroides finegoldii DSM 17565] gi|260623069|gb|EEX45940.1| signal peptide peptidase SppA, 67K type [Bacteroides finegoldii DSM 17565] Length = 592 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I D ++I + ++ +D A+++ ++SPGGS Sbjct: 303 DKSGNIIAVYYASGEITDYPGSATSEEGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWYAVKELKTKKPVIVSMGDYAASGGYYISCGADTIVAEPTTLTGSIGIFGMVP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK DK+G+S VK++ + + ++Q +V Y F+ +E R+ Sbjct: 423 NVKELTDKIGLSYDVVKTNKYADFGNIMRPFSEGEKALLQMMVAEGYDTFITRCAEGRHT 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + +++GR+WTG AK++GL+D +GG ++ A + P K Sbjct: 483 TKEAIEKIAEGRVWTGEAAKELGLVDELGGIDKALDIAVAKARVGGYTIVSY--PEKKDV 540 Query: 260 FCDLKNLSISSLLEDTI 276 L + ++ +E + Sbjct: 541 LSSLLDTKPTNYVESQL 557 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 28/256 (10%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------------EDS---- 50 ++ +VTL + + + V + + G + +DS Sbjct: 22 LFIIGMVTLFGIMAASDTETIVKKNSVMILDLNGTLVERTQEDPLGILSQLFNDDSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I++ ++ + + +S G S + + I A+ K + + Sbjct: 82 LDDILSSIKKAKENEDIKGIYLQANSLGTSYASLQEIRNALLDFKESGKFVIAYADSYTQ 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y +S A++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 142 GLYYLSSAADKVLLNPKGMIEWRGIASTPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFIA 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGLI 224 +E++P + + + S + VS SRNIP D +D R + E+ + GL Sbjct: 202 TEMSPANREQVTTFISSIWSQVTEGVSASRNIPVDSLKAYAD-RMLMFYPAEESVRCGLA 260 Query: 225 DVVGGQEEVWQSLYAL 240 D + + +V L L Sbjct: 261 DTLVYRNDVRDYLKRL 276 >gi|302345567|ref|YP_003813920.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica ATCC 25845] gi|302149332|gb|ADK95594.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica ATCC 25845] Length = 592 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 5/259 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 VY+++ V+ V + +G D+Q + + +E +++D A++V ++S GGSA Sbjct: 306 VAVYYAYGDIVDGV---VGGLFSQGHQIDAQVVCKDLEELAKDKDVKAVVVRVNSGGGSA 362 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+ I ++K KPV+ + MAAS GY +S +N IVA T++ GSIG+ +P Sbjct: 363 YASEQIWHQIMELKKLKPVVVSMGGMAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPD 422 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V L +KLG+ VK++ + + + + V+ Y F V+E R + Sbjct: 423 VSGLLREKLGLKFDEVKTNKYADFGTRARPFTEEEMSYLSQYVNRGYKLFRHRVAEGRKM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + ++ G ++TG +A+K+GL+D +GG + L + RK P N+ Sbjct: 483 TEKQVEKVAQGHVFTGQDAQKIGLVDQLGGLDVAVAKAAQLAKLPNYRKCAYPKEP-NFL 541 Query: 260 FCDLKNLSISSLLEDTIPL 278 ++ + ++ L + Sbjct: 542 EQMMEQTNPNNYLSQQLRA 560 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 98/268 (36%), Gaps = 37/268 (13%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QELI 54 + +L T+ + S + E + + + GQ+ + +++ Sbjct: 24 LFALFTIVGMIASQDTTKEPEDNSILVLNLSGQMSERSENNFLSQLQGSQINSLGLDDML 83 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGE------AIFRAIQKVKNRKPVITEVHEMAA 108 E I + +D + + A+A + A+ +A+ K + I + Sbjct: 84 EGIRKAKDNDKIKGIYIEA-----GAFASDSYASMQALRKALLDFKKSRKWIIAYADTYT 138 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y +S ++ + + G+ + ++K L K GV ++ VK K+ F+ Sbjct: 139 QGTYYLSSVADKVYLNPQGQIDWHGLASEPVFIKDLLAKFGVKMQVVKVGAYKSATEMFT 198 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLI 224 +++ + ++S + + V SR + + +D I E K+ L+ Sbjct: 199 GDKMSDANREQTSAYLNSIWGNITKEVGASRGLSVAQLNAYADSMITFADPQEYVKLKLV 258 Query: 225 DVVGGQEE---VWQSLYALGVDQSIRKI 249 D + ++ + + + D+ I ++ Sbjct: 259 DGLVYTDQIKGIVKKQLGIEADKDINQV 286 >gi|114567921|ref|YP_755075.1| periplasmic serine protease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338856|gb|ABI69704.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 297 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 130/239 (54%), Gaps = 14/239 (5%) Query: 29 SHVEDNSPHVARIAIRGQIED-----------SQELIERIERISRDDSATALIVSLSSPG 77 + + +A + I G I + +++E I + + + A++V + SPG Sbjct: 31 GSTREGTATIAVVQINGPISGVSSWLENSSSTAGDIMEAIRKAGKREDIKAVVVRIDSPG 90 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GSA A + I +++++ + KPV+T + ++ AS GY I+C+++ IVA SL GSIGV+ Sbjct: 91 GSAGASQEIAMELERLREKGKPVVTSMGDVCASGGYWIACSTDHIVANGASLTGSIGVIM 150 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q ++ KLG+ +++KS K S E++ + +++QD+VD SY F+ V + Sbjct: 151 QLSNLEGLYGKLGIRNQTIKSGEHKDMGSTSRELSAEEEKILQDLVDDSYQQFLEQVQKG 210 Query: 197 R--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 R I DK L ++DGRI+TG +A ++GL+D +G + + + + K++ N Sbjct: 211 RQEKIAADKLLEIADGRIFTGKQALELGLVDSLGNYYDAVRQAEKMAGIKGESKLEVIN 269 >gi|330985586|gb|EGH83689.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. lachrymans str. M301315] Length = 332 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF + Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKAEET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|237800341|ref|ZP_04588802.1| peptidase S49, SppA [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023198|gb|EGI03255.1| peptidase S49, SppA [Pseudomonas syringae pv. oryzae str. 1_6] Length = 332 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T V + + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTF--AFLFVAVVLPMLDLEGGASRRSSHTALIDVQGVIADKEAASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGTMEKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G +WTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLVWTGEQAVGLGLVDGLGNASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + L R I ++ ++ + D + I + + + I + L Sbjct: 286 ARELI------KERDIVEYTVEESPF--DRFSKKIGTSMAERIATLVGFSGPTL 331 >gi|284921686|emb|CBG34758.1| protease IV [Escherichia coli 042] Length = 618 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + ++ KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARSAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + +A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITKALPQEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 110/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT----LVLSDGR 211 K+ PF +++P A + + + ++ V+ +R IP + L +G Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQRLLEGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 TG + A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|228472447|ref|ZP_04057209.1| signal peptide peptidase SppA, 67K type [Capnocytophaga gingivalis ATCC 33624] gi|228276132|gb|EEK14879.1| signal peptide peptidase SppA, 67K type [Capnocytophaga gingivalis ATCC 33624] Length = 596 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 9/262 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 E + +A I G+I D Q +I+ + D A+++ ++SPGGS A Sbjct: 302 EIKNDKIAVIFCDGEIIDGQSTAGRVGHETIIKALRDAREDKRVKAIVLRVNSPGGSGLA 361 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R I + +KPV + +AAS GY ISC + I A +L GSIGV P + Sbjct: 362 SELIHREIGLTQKKKPVYASMGNVAASGGYYISCNATRIFADRQTLTGSIGVFGVVPNLS 421 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G+ + V + P S F + K Q++ + +++ Y FV+ V++ R++ ++ Sbjct: 422 ELTQRWGIHSQQVSTHPYALSYSLFEKTPEKTRQVITEGIEAFYKKFVQRVADGRHMSWE 481 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ GR+WTG EA + GL+D +G E + + P F D Sbjct: 482 EVDALAQGRVWTGQEALEKGLVDEIGSLRETIAYAAKEQKLSEGKYLPVAYPIIEVNFMD 541 Query: 263 LKNLSISSLLEDTIPLMKQTKV 284 + + + ++ Q ++ Sbjct: 542 YMKQRFRASSQAELKMLLQEEI 563 Score = 92.2 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 87/227 (38%), Gaps = 36/227 (15%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE------AIFRAIQKVKNRKPVITEVH 104 Q ++ I+ D +++ GS E I A++ K + Sbjct: 78 QAILRAIKHAQEDPHIKGIVL------GSTEGVEGKTHLADIRHAVEDFKKSGKFV---- 127 Query: 105 EMAASAG-----YLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVK 156 A S G Y + ++ + +GS+ G+ + Y K +K GV ++ + Sbjct: 128 -YAFSEGASQYDYYLQSVADSVFV---GTLGSVEVQGLSAEVLYYKDLQEKSGVHMEVFR 183 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GR 211 K+ PF E ++ + + + S ++ + VS SR + + ++D GR Sbjct: 184 HGKYKSAVEPFLENTMSDANREQITSYLRSLWNSYAEAVSSSRGLSLSELDQVADSLWGR 243 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 T A + L+D + +++ +S+ + + + W P + Y Sbjct: 244 --TPELALQHHLVDRIAFRDQFEESVRKASKCKEVNDL-QWVPIEKY 287 >gi|78222959|ref|YP_384706.1| signal peptide peptidase A [Geobacter metallireducens GS-15] gi|78194214|gb|ABB31981.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Geobacter metallireducens GS-15] Length = 301 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 129/245 (52%), Gaps = 2/245 (0%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 ++ +L + + V + ++G I +S+E+++++ + + + A+++ Sbjct: 18 LLFTLSIQIARLILGDGPMVSSGEGVGYVEVKGPILESEEIVKQLSEMRKKTNVKAVVLR 77 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I+ A++K+ K V+ + +AAS GY I+ + +I A ++ GSI Sbjct: 78 IESPGGVIGPSQEIYEAVKKLAKTKKVVVSMGSVAASGGYHIAIPAAVIYANPGTITGSI 137 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL + V+ +DK+G+ ++KS K SP + + ++Q V+D+ + FV+ Sbjct: 138 GVLMKLANVEGLMDKVGMKAFTLKSGKFKDAGSPVRALTDEDRALLQGVIDNLHTQFVKA 197 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E+R +P ++ L+DGR++TG +A + L+D +G E+ + L + + Sbjct: 198 VAEARKLPVEEVRRLADGRVYTGEQAVSLKLVDRLGTLEDAVEEAGRLAGIKGEPTL--L 255 Query: 253 NPPKN 257 PPK Sbjct: 256 MPPKK 260 >gi|301063986|ref|ZP_07204451.1| signal peptide peptidase SppA, 36K type [delta proteobacterium NaphS2] gi|300441897|gb|EFK06197.1| signal peptide peptidase SppA, 36K type [delta proteobacterium NaphS2] Length = 294 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 71/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 V+L + L +F S + +AI G I +++ ++ + +RD++ A+I+ Sbjct: 12 VLLGGILLLTFHFFGPSTTALFKEKIGVVAINGTISSGKKISSQLAKFARDENIRAIILR 71 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG A + I+R +QK +KPVI + +AAS GY ++ + IV+ ++ GSI Sbjct: 72 INSPGGGVGATQEIYREVQKTIRQKPVIVSMGSVAASGGYYVAAPATKIVSNPGTITGSI 131 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV Q+ ++ L K+GV + VKS K SP ++ + ++++ +++ FV Sbjct: 132 GVFIQFVRLEKLLSKIGVDFEIVKSGEFKDMGSPDRKLTRRDREIIEALIEDLQGQFVSA 191 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ R++ + +DGRI++GA AK++GL+D +G ++ + + +++ Sbjct: 192 VASGRHLSVQEVQKFADGRIFSGARAKQLGLVDFMGNFQDAVEITKKVVGITG--EVELV 249 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 +P K +L +L + S + + W Sbjct: 250 HPKKTS--SELLDLFLESSARHFMKAFGDGAKGNVLYRW 286 >gi|89094371|ref|ZP_01167312.1| peptidase, putative [Oceanospirillum sp. MED92] gi|89081430|gb|EAR60661.1| peptidase, putative [Oceanospirillum sp. MED92] Length = 349 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 14/246 (5%) Query: 32 EDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + H A I ++G I ++ +I + +++ A A+I+ ++SPGGS I Sbjct: 92 QAGEAHTAIIEVKGPISADDEANADSIIWSLREAFKEEQAKAIILRINSPGGSPVQSGYI 151 Query: 87 FRAIQKVKN---RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I++++ KPV + ++ AS Y I+ A++ I A + SLVGSIGV+ Sbjct: 152 YDEIKRLRQIYTDKPVYAVITDIGASGAYYIAAAADSIYADKASLVGSIGVVAGGFGFVD 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++K+GV + + KA PFS + Q V+++++ F+ V R Sbjct: 212 LMNKVGVERRLYTAGEHKAFLDPFSPSKEGEKEFWQGVLNTTHQQFIDQVKLGRGERLKD 271 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + L G +WTG +A +GL+D +G V + + + K+ D++P + W + Sbjct: 272 SPELFSGLVWTGEQAVDLGLVDGLGSSSYVAREIV------KVEKLVDYSPQQAPWKQLV 325 Query: 264 KNLSIS 269 L +S Sbjct: 326 DELGVS 331 >gi|170748863|ref|YP_001755123.1| signal peptide peptidase SppA, 36K type [Methylobacterium radiotolerans JCM 2831] gi|170655385|gb|ACB24440.1| signal peptide peptidase SppA, 36K type [Methylobacterium radiotolerans JCM 2831] Length = 320 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 159/290 (54%), Gaps = 9/290 (3%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +++++ L + + P +ARI++ G I S+ + ++R+ D+ +IVS Sbjct: 29 LIVAVGALGYRVRTGADGAFAVQPQIARISVSGFIAGSEATAKLMKRVGDSDAVKGVIVS 88 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG+ E IFR ++ + +KP++ V AAS Y+ + A++ IVA ETSLVGSI Sbjct: 89 INSPGGTTTGSEEIFRNLRALAAKKPIVAFVDGTAASGAYITAIAADHIVARETSLVGSI 148 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVLFQYP LDK+GV ++SVKSSP+KAEPS F+ +P+A + VV +Y WF L Sbjct: 149 GVLFQYPDFSGLLDKVGVKVESVKSSPLKAEPSGFTPTSPEARAALASVVGDTYAWFKGL 208 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R + + +SDGR+++G ++ + L+D +GG+ + L + Q+ IKDW Sbjct: 209 VAERRGMDPAQLSTVSDGRVFSGRQSVPLKLVDELGGERQAVAWLESARGVQANLPIKDW 268 Query: 253 NPPKNYWF---------CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P F DL L + + + G+ A+W P Sbjct: 269 KPASESRFSLWSAAGIGADLLGLEGLAARLRAVGAEAEAARGGMLALWRP 318 >gi|329121217|ref|ZP_08249844.1| signal peptide peptidase [Dialister micraerophilus DSM 19965] gi|327470151|gb|EGF15614.1| signal peptide peptidase [Dialister micraerophilus DSM 19965] Length = 322 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 134/270 (49%), Gaps = 22/270 (8%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVE-----DNSPHVARIAIRGQI-------------- 47 KI +++ + + F V +N+ +VA + I G I Sbjct: 14 KITLAVIIVLFILAIAINFVGMKDVSSFANKNNNKYVAVVRIDGPIYGGDVNQNMLGGVS 73 Query: 48 -EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHE 105 S++++ + +RD +A A+++ ++SPGG+ A + I I KV+N KPVI + + Sbjct: 74 GSSSEDIMYELREATRDPNAKAVLLRINSPGGTTGATQEIAEEIDKVRNSGKPVIVSMGD 133 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 ASAGY ++ + I A+ ++ GSIGV Y V +DKLGV + +KS K S Sbjct: 134 TCASAGYWLASKGDYIFASPATITGSIGVYMDYTNVSELMDKLGVKNEKIKSGTHKDILS 193 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + + ++Q +VD Y+ FV+ +++ R++ K ++DGRI TG +A+ GL+D Sbjct: 194 MYRPITDEEKTILQKMVDDIYNQFVQTIADGRHLEEAKVREIADGRILTGKQAQAYGLVD 253 Query: 226 VVGGQEEVWQSLY-ALGVDQSIRKIKDWNP 254 +G + +G++ + + ++ Sbjct: 254 AMGNYYDALTYAGNRVGINSDVIPTRSYSK 283 >gi|134295145|ref|YP_001118880.1| peptidase S49 [Burkholderia vietnamiensis G4] gi|134138302|gb|ABO54045.1| peptidase S49 [Burkholderia vietnamiensis G4] Length = 329 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 12/244 (4%) Query: 7 KIKTRYVML---SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+ L +L+ ++ FS S + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFALLAFALIDFSGDSKF-SSGRHTALVTIDGEIAAGTNANAEDINTALD 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ KP+ V ++ AS GY I+ Sbjct: 103 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRKTYPDKPLYVVVTDICASGGYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 163 SAADKIFVDKASIVGSIGVLMDGFGFTGLMSKLGVERRLHTSGENKGFYDPFSPETPKMD 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 223 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 282 Query: 236 SLYA 239 + Sbjct: 283 DVLK 286 >gi|299067011|emb|CBJ38206.1| Peptidase S49 [Ralstonia solanacearum CMR15] Length = 378 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L ++ + F S+ + H A + + G+I + + ++ Sbjct: 92 RIFFRFVTLGIIGGLLYLFASFEGETVSSGRHTALVTLDGEIAANTNASADNINASLDAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKYKDIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGTNKGMLDPFSPVAPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTGA+A +GL D +GG + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGAKAVDLGLADGIGGTDFVARNV 331 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 332 I------KAPDLVDYTVKENFAERVARKFGTAMGAGAIKALAATGQLKLLM 376 >gi|330502590|ref|YP_004379459.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina NK-01] gi|328916876|gb|AEB57707.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina NK-01] Length = 325 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 19/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + + L + S + H A I IRG I D + +++ + Sbjct: 40 IFFKLLTFIYLFGALALVLPALDLKS-ASTTTAHTALIEIRGMIADREEASADKVVGSLR 98 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D + +I+ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 99 AAFEDTNTKGVILRINSPGGSPVQSGYIYDEIRRLRGEYPQTKVYAVISDLGASGAYYIA 158 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV + S KA PF + Sbjct: 159 SAADEIYADKASLVGSIGVTAASFGFVETMEKLGVERRVYTSGEHKAFLDPFQPQKEEET 218 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + V+D+++ F+ V + R + D+ L G +W+G +A ++GL+D +G V Sbjct: 219 RFWKTVLDTTHRQFIDSVKKGRGDRLKADEHPELFSGLVWSGEQALQLGLVDALGSASYV 278 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + +++ D+ + K L S + D I L + L Sbjct: 279 AREVIG------EKEMVDFTQRDTPFDRFAKRLGTS--VADRIALWMGFQGPTL 324 >gi|313499938|gb|ADR61304.1| Signal peptide peptidase SppA, 36K type [Pseudomonas putida BIRD-1] Length = 329 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 10/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L ++ H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +DD A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 103 EAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPEKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q V+D+++ F+ +V + R + + L G IW+G +AK +GL+D +G V Sbjct: 223 RFWQGVLDTTHQQFIAMVKQGRGERLKDKQHPELFSGLIWSGEQAKALGLVDGLGSASYV 282 Query: 234 WQSLYA 239 + + Sbjct: 283 AREIVG 288 >gi|207743609|ref|YP_002260001.1| protease protein [Ralstonia solanacearum IPO1609] gi|206595008|emb|CAQ61935.1| protease protein [Ralstonia solanacearum IPO1609] Length = 416 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L ++ + F S+ + H A +++ G+I ++ + +E Sbjct: 130 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVSLDGEIAASTNASAENINASLEAA 189 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 190 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 249 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 250 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 309 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D +G + V +++ Sbjct: 310 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGIGSADFVARNV 369 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 370 I------KAPDMVDYTVKENFAERVARKFGTAMGAGAIKALAATGQLKLLM 414 >gi|154489868|ref|ZP_02030129.1| hypothetical protein PARMER_00097 [Parabacteroides merdae ATCC 43184] gi|154089310|gb|EDN88354.1| hypothetical protein PARMER_00097 [Parabacteroides merdae ATCC 43184] Length = 591 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%) Query: 38 VARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A + G+I D S+E+ ++ ++ DD A++ ++SPGGSAY Sbjct: 306 IAVLYAEGEIRDEDSSSPFSADEQVISEEMANKLRKLKDDDDVKAVVFRVNSPGGSAYIS 365 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I++ + ++K +KP++ + AAS GY ISCA+N IVA T+L GSIGV Sbjct: 366 EQIWKEVVELKAKKPIVVSMGNYAASGGYYISCAANKIVAERTTLTGSIGVFGVVRNFTG 425 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+GV+ VK++ + ++Q V+ +Y F+ ++ R + + Sbjct: 426 TFDKVGVTTDIVKTNTFADLGDISRPMREDEKALIQRGVEQTYDLFLTRCADGRGMTKAE 485 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + GR+WTG +A + GL+D +GG ++ + L I P Sbjct: 486 IDSIGQGRVWTGEQALERGLVDQLGGMDDAIKEAATLAELTDYSVIVADGPK 537 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 89/263 (33%), Gaps = 29/263 (11%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QELIE 55 + + SS + + V ++++ G + D ++I+ Sbjct: 27 IFFIIGVAASADGSSEYKPDKNTVFKLSLDGVLVDQAVKNPFSELMGESSNQMAVSDVIK 86 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 I R +D+ + + S EAI R ++ K+ I + Y + Sbjct: 87 AIRRAKANDNIKGIYLEAGSLSTGFAGIEAIRRELEDFKDSGKFIVSYGDYYTQGAYYLC 146 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPK 173 ++ + V +G+ Q + +K+GV K K+ PF + + Sbjct: 147 SVADSVFLNPQGSVSLVGLASQGLFFTGLAEKIGVEHYIFKVGTYKSAVEPFFLKKFSDA 206 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-----LSDGRIWTGAEAKKVGLIDVVG 228 + + + S + + +SRNI D+ L+ G+ + A L D + Sbjct: 207 NREQLTSFLGSVWGNLTTAIEKSRNISSDELDRYLNEGLAMGQ---ASNAVDYKLADGLR 263 Query: 229 GQEEVWQSLYALGVDQSIRKIKD 251 + EV + + K+K Sbjct: 264 YRYEVENCVKEMAGQDVKGKLKT 286 >gi|329961656|ref|ZP_08299715.1| signal peptide peptidase SppA [Bacteroides fluxus YIT 12057] gi|328531648|gb|EGF58482.1| signal peptide peptidase SppA [Bacteroides fluxus YIT 12057] Length = 589 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 7/246 (2%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGS 79 + VY+++ S I S ++I+ + ++ D++ A+++ ++SPGGS Sbjct: 305 VIAVYYAYGEIDGGTSSSTGEEGIN-----SVKVIKDLRKLKEDENVKAVVLRVNSPGGS 359 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 AY E I+ A+ ++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ +P Sbjct: 360 AYGSEQIWYAVSELKKEKPVIVSMGDYAASGGYYISCNADTIVAEPTTLTGSIGIFGMFP 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 K DK+G++ VK++ +N +MQ V+ Y F+ S+ R I Sbjct: 420 NAKGLTDKIGLNFDVVKTNQYADFGMLTRPMNDGEKGLMQMYVNQGYDLFLTRCSDGRGI 479 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ ++ GR+WTG+ AK++GL+D +GG ++ + A + + P K + Sbjct: 480 GKEELDKIAQGRVWTGSTAKELGLVDELGGLDKAVEIAIAKSGVDAYTVMSY--PKKESF 537 Query: 260 FCDLKN 265 L N Sbjct: 538 LESLMN 543 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 106/277 (38%), Gaps = 30/277 (10%) Query: 1 MEFVLKKIKTRYV------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---- 50 ++F L I V +S++ + S S + + + + G + + Sbjct: 5 LKFTLATITGLIVTGVIVFFISILVFFSMVSSSESETQIRKNSIMMLDLNGALAERSQEN 64 Query: 51 ---------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +++ I++ ++ + + +S + E I A++ K Sbjct: 65 PFEFLLDDEYSTYGLDDILSSIKKAKENEEIKGIYIQATSLATGFASLEEIRSALKDFKE 124 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 I + + Y +S ++ ++ ++ G+ + K L K+GV ++ Sbjct: 125 SGKFIVAYGDTYSQGLYYLSSVADKVLLNPQGMIEWRGLAAAPMFFKDLLAKIGVEMQVF 184 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 K K+ PF +E++P + + + S + V+ESR + D ++D I Sbjct: 185 KVGTYKSAVEPFVSTEMSPANREQVNVYLASIWGQLTSDVAESRKVSVDSLNAIADRMIM 244 Query: 214 T--GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIR 247 E+ K GL D + + +V L A+ G+D+ R Sbjct: 245 FHPAEESVKCGLADTLIYKNDVRNYLKAMAGIDEDDR 281 >gi|104780778|ref|YP_607276.1| peptidase SppA [Pseudomonas entomophila L48] gi|95109765|emb|CAK14470.1| putative peptidase SppA [Pseudomonas entomophila L48] Length = 327 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 18/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L + H A + +RG I D + +++ + Sbjct: 41 IFFKLLTFVYLFGMLALFTPLMDVDKAASRSGSHTALVEVRGVIADQEPASADNIVKSLR 100 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 101 EAFKDSKTKAVVMRINSPGGSPVQAGYVYDEIRRLRGEYPAIKLYAVITDLGASGAYYIA 160 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV + KLGV ++ + KA PFS P+ Sbjct: 161 SAADEIYADKASLVGSIGVTAAGYGFVGAMGKLGVERRTYTAGEHKAFLDPFSPQKPEET 220 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+D+++ F+ +V + R + + L G IW+G +AK++GL+D +G V Sbjct: 221 AFWQGVLDTTHRQFIAVVKQGRGERLKDKEHPELFSGLIWSGEQAKELGLVDGLGSASYV 280 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + +++ D+ ++ + K L S + + + + + L Sbjct: 281 AREIVG------EKELVDFTVQESPFDRFSKRLGAS--VAERLSMYMGFQGPSL 326 >gi|121605973|ref|YP_983302.1| peptidase S49 [Polaromonas naphthalenivorans CJ2] gi|120594942|gb|ABM38381.1| peptidase S49 [Polaromonas naphthalenivorans CJ2] Length = 360 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 13/270 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERIS 61 ++ +++ ++ L + + + + PH A + I+G+I + + + + Sbjct: 81 FVRMSWLLFFIILLWMALQRGTPVTDASVPHTAVVEIKGEIAEGADASAEFVNAALRTAF 140 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASN 119 D+ + A+++ ++SPGGS + I ++K +KPV V E ASA Y I+ +++ Sbjct: 141 EDEGSKAIVLLINSPGGSPVQAGMMNDEILRLKTKHKKPVYAVVEESCASAAYYIAVSAD 200 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I + S+VGSIGVL +DKLGV + + + K PFS + K Q Sbjct: 201 QIFVDKASIVGSIGVLMDSFGFSGLMDKLGVERRLLTAGENKGFLDPFSPQSDKQRAFAQ 260 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ +V R +T + G W G +A ++GL D +G + V + + Sbjct: 261 AMLDQIHQQFIAVVKAGRGKRLKETPEMFTGLFWNGQQAVELGLADHLGNLDYVAREVV- 319 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + +I D+ +N K + Sbjct: 320 -----KVEEIIDYTRRENVAERLAKKFGAA 344 >gi|116250187|ref|YP_766025.1| peptidase [Rhizobium leguminosarum bv. viciae 3841] gi|115254835|emb|CAK05909.1| putative peptidase [Rhizobium leguminosarum bv. viciae 3841] Length = 327 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 116/296 (39%), Positives = 185/296 (62%), Gaps = 13/296 (4%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R + ++L+ L ++ ++ PH+A + I G I D EL+ER++++ D Sbjct: 29 FWRLIAVALIVALGFAFYRFALGDAGTQRPHIAHVTISGLIVDDDELLERLKKVETSDQV 88 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++ Sbjct: 89 KAAVISISSPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDS 148 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 149 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKTMIRNMVVDSY 208 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV LV++ R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L + GVD + Sbjct: 209 NWFVDLVADRRKLPRDEVLKLADGTIYTGRQALKVKLVDAIGGEAEIRAYLTSRGVDSDL 268 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK----------QTKVQGLWAVWN 292 + DW+ N F +S + LMK + + GL +VW Sbjct: 269 -PMVDWDKKSNTPFLLAGAVSRLITIFGYDDLMKTQDINGILPPKLLLDGLLSVWQ 323 >gi|254252862|ref|ZP_04946180.1| Periplasmic serine protease [Burkholderia dolosa AUO158] gi|124895471|gb|EAY69351.1| Periplasmic serine protease [Burkholderia dolosa AUO158] Length = 331 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I ++ ++ ++ Sbjct: 45 KIFFRFAFLGVFLLLAFALIDFSSDAKFASGGRHTALVTIDGEIAAGTNANADDINTALD 104 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 105 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIKRLRAKYPDKPLYVVVTDMCASGGYYIA 164 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 165 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 224 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 225 AHAQELLDQVHAQFIKAVKDGRGKRLRETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 284 Query: 236 SLYA 239 + Sbjct: 285 DVLK 288 >gi|238794514|ref|ZP_04638123.1| Protease 4 [Yersinia intermedia ATCC 29909] gi|238726197|gb|EEQ17742.1| Protease 4 [Yersinia intermedia ATCC 29909] Length = 616 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 26/271 (9%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +A I G I D L +I + D A+I+ ++SPGGS A E Sbjct: 323 GEQIAVIFANGAIIDGPQTPGNVGGDSLAAQIRQARLDPKIKAVILRVNSPGGSVSASEL 382 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + ++ KP++ + MAAS GY IS +N IVA+ ++L GSIG+ + Sbjct: 383 IRSELAALRAANKPLVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTFQNS 442 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ +GV V +SP+ S + P+ QMMQ +++ Y F+ LV+ SR+ ++ Sbjct: 443 LESIGVHTDGVATSPLADI-SVTKNLPPEFSQMMQINIENGYKTFIDLVATSRHKTPEQV 501 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G +W G +AK GL+D +G ++ + + L K+K W + WF D Sbjct: 502 DQIAQGHVWLGIDAKNNGLVDQLGDFDDAVKKVAELA------KLKTW---QLNWFVDEP 552 Query: 265 NLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 +LS I + ++ M +Q W P Sbjct: 553 SLSDLIFGQMSASVQAMLPAAIQA----WIP 579 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 21/222 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++E I D++ T L++SLS G+ + I +A+++ ++ KP+ + Sbjct: 97 DIVETIRLAKTDNNITGLVLSLSDFTGADQPSLQYIGKALREFRDSGKPIYAIGDSYNQT 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 157 -QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPMIR 215 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ V+ +R + ++ + G + +G + A Sbjct: 216 DDMSPAAREADSRWIGGLWQNYLTAVAANRQLTPEQLFPGAAG-VISGLQTAGGSPAKYA 274 Query: 219 KKVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNP 254 L+D + + EV L D + I D+ P Sbjct: 275 LDSKLVDTLASRPEVETELVKTFGWDKKNNDFNYVSIYDYQP 316 >gi|74317578|ref|YP_315318.1| protease [Thiobacillus denitrificans ATCC 25259] gi|74057073|gb|AAZ97513.1| protease [Thiobacillus denitrificans ATCC 25259] Length = 313 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 15/281 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED----SQELIERIERISRDDSAT 67 ++ L +V V + V H A + ++G I + +I ++ D Sbjct: 39 FLYLFIVLFLVAGWFGDDGVGIPKAHTALVDLQGVIASDQASADAVITSLQSAFEDKKTK 98 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCASNIIVAA 124 +++ ++SPGGS I+ I++++ + P+ V ++ AS GY ++ ++ I Sbjct: 99 GVVLRINSPGGSPVQAGQIYDEIRRLRKLHPQVPLYAVVDDICASGGYYVAVGADKIFVD 158 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + S+VGSIGVL + KLGV + + + K PFS VNP+ + +++ Sbjct: 159 KASIVGSIGVLMDGFGFTETMQKLGVERRLLTAGENKGFLDPFSPVNPEQQAYAKQMLEE 218 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + F+ V E R +T + G +W+G + ++GL D +G + V + + Sbjct: 219 IHGQFIATVREGRGKRLKETPDMFTGLVWSGERSIQLGLADEIGSLDTVARDVI------ 272 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 I D+ ++ + + + + + L + VQ Sbjct: 273 KAEDIVDFTKEES--LAERLAGRLGATMAKAMGLTDRAGVQ 311 >gi|224499759|ref|ZP_03668108.1| hypothetical protein LmonF1_08734 [Listeria monocytogenes Finland 1988] Length = 283 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 120/224 (53%), Gaps = 16/224 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAQ 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 237 GRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKK 280 >gi|298486214|ref|ZP_07004277.1| Probable peptidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159221|gb|EFI00279.1| Probable peptidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 332 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|222084667|ref|YP_002543196.1| proteinase IV protein [Agrobacterium radiobacter K84] gi|221722115|gb|ACM25271.1| proteinase IV protein [Agrobacterium radiobacter K84] Length = 318 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 118/292 (40%), Positives = 178/292 (60%), Gaps = 12/292 (4%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 ++L + + F + + P +AR+AI G I+D EL+ER+++I +D ALIV Sbjct: 24 VLLLVGLGFALYRFFAADLPDTRGPQIARVAISGLIQDDSELLERLKKIKDNDQVKALIV 83 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 S+SS GG+ Y GE IF+AI+ V +KPV++++ +AASAGY+I+ A + IVA +TS+ GS Sbjct: 84 SISSTGGTTYGGERIFKAIRAVAAKKPVVSDIRTVAASAGYMIATAGDDIVAGDTSITGS 143 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+FQYP K LDKLGVS++ +KSSPMKAEPSPF + A M++++V SY WFV Sbjct: 144 IGVIFQYPQAKDLLDKLGVSLEDIKSSPMKAEPSPFHPPSEDAKNMIRNMVMDSYGWFVD 203 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 LV++ R +P ++ L L+DG I+TG +A + LID +GG++E+ L V++ + I D Sbjct: 204 LVADRRKLPREEVLKLADGSIFTGRQALQNKLIDTLGGEDEIRAYLDTRKVNKDL-PIVD 262 Query: 252 WN----------PPKNYWFCDLKNLSISSLLEDTIPLM-KQTKVQGLWAVWN 292 W P W +L E +M ++ + GL +VW Sbjct: 263 WKAENKTSSFFWPGAASWLLNLFGYDDFVKGEGFQKMMTEKLFLDGLLSVWQ 314 >gi|108803542|ref|YP_643479.1| signal peptide peptidase A [Rubrobacter xylanophilus DSM 9941] gi|108764785|gb|ABG03667.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rubrobacter xylanophilus DSM 9941] Length = 340 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 18/264 (6%) Query: 37 HVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I + G I + L + + + D+S A++++++SPGG A Sbjct: 67 KIAVIPVEGTIASADSSLAGPVPIATPEGLRDALRQAREDESVRAVVLAVNSPGGGVTAS 126 Query: 84 EAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + + AIQ + KPV+ + ++AAS GY IS A++ IVA ET+L GSIGV Sbjct: 127 DLMHDAIQDFRRATDKPVVVSMGDVAASGGYYISTAADRIVANETTLTGSIGVFIPLLNF 186 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 K GV +KS KA +P++E+ ++ Q +VD Y FV ++ E R++P Sbjct: 187 SEASKKYGVKQIYIKSGRFKAMGNPWNELTEDERRIFQSIVDQYYGEFVEVIVEGRDLPE 246 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + L+DGR+++G +A+++GL+D +G + + L R ++ P Sbjct: 247 KRVRELADGRVYSGIQAERLGLVDRLGNLDTAVRVARDLAGVDEARVVRYVQSP---GLL 303 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQ 285 DL + +++ L++ + Sbjct: 304 DLFLARLEQPEPESLQLLRAANLD 327 >gi|167919892|ref|ZP_02506983.1| peptidase, U7 family protein [Burkholderia pseudomallei BCC215] Length = 580 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 20 RIFFRFAFLAVLGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTALD 79 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 80 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 139 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 140 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 199 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 200 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 259 Query: 236 SLYA 239 + Sbjct: 260 DVLK 263 >gi|91789506|ref|YP_550458.1| peptidase S49 [Polaromonas sp. JS666] gi|91698731|gb|ABE45560.1| peptidase S49 [Polaromonas sp. JS666] Length = 361 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 14/282 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERIS 61 ++ ++ + + ++ + + +PH A + I+G+I ++ + + Sbjct: 82 FVRLAWLAFFIALVWMLLHRGTPATDAAAPHTAVVEIKGEIAAGADASAEFVNAALRAAF 141 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASN 119 DD A A+++ ++SPGGS + I ++ K++KPV V E ASA Y I+ A++ Sbjct: 142 EDDGAKAVVLLINSPGGSPVQAGMMNDEILRLKIKHKKPVYAVVEESCASAAYYIAVAAD 201 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I + S+VGSIGVL +DKLGV + + + K PFS + K Q Sbjct: 202 KIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLLTAGENKGFLDPFSPQSDKQRVYAQ 261 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ +V R + + G W+G +A ++GL D +GG E V + + Sbjct: 262 AMLDQIHQQFITVVKAGRGKRLKEMPEMFSGLFWSGQQAVELGLADQLGGLEYVAREVV- 320 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 +I D+ + L +++ E I K Sbjct: 321 -----KAEEIIDYT-RRENVAERLAKKFGAAMGEGAIRAFKA 356 >gi|330975218|gb|EGH75284.1| peptidase S49, SppA [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 332 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 21/293 (7%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + ++ ++++ V + S H A I ++G I D ++ ++ +++ Sbjct: 50 FKLLTFAFLFVAVI---VPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVNALQK 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 107 AFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Q Sbjct: 167 AADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q V+D+++ F+ V + R + + L G IWTG +A +GL+D +G V Sbjct: 227 FWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLGSASYVA 286 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 287 RDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|330973864|gb|EGH73930.1| peptidase S49, SppA [Pseudomonas syringae pv. aceris str. M302273PT] Length = 332 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 21/293 (7%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + ++ ++++ V + S H A I ++G I D ++ ++ +++ Sbjct: 50 FKLLTFAFLFVAVI---VPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQK 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 107 AFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Q Sbjct: 167 AADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 227 FWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYVA 286 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 287 RDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|302187284|ref|ZP_07263957.1| peptidase S49, SppA [Pseudomonas syringae pv. syringae 642] Length = 332 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|253989459|ref|YP_003040815.1| protease 4 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780909|emb|CAQ84071.1| protease iv (endopeptidase iv) (signal peptide peptidase) [Photorhabdus asymbiotica] Length = 618 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 134/284 (47%), Gaps = 23/284 (8%) Query: 21 TVVYFSWSS-HVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALI 70 + + ++ + + ++A I +G I D Q+ +I + DD+ A++ Sbjct: 310 AISIYDYAPQNRSSSKGNIAVIVAQGAIIDGQQASGMVGGDTTAAQIRQARLDDNIKAVV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A + I + ++ KPV+ + MAAS GY IS +N I+A +++L Sbjct: 370 LRVNSPGGSVSASDVIRTELAALRAANKPVVVSMGGMAASGGYWISTPANYIIANQSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + LD +G+ V ++P+ S ++ + ++MQ +++ Y F Sbjct: 430 GSIGIFGVITTYENSLDHVGIHTDGVSTTPLADI-SFTKGLSKEFSELMQLNIENGYKNF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++RN ++ ++ G +W G +AK GL+D +G ++ L Sbjct: 489 IGLVADARNKTPEEVDKIAQGHVWIGNDAKTNGLVDQLGDFDDAVAKAAELAK------- 541 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + P+ W +S S LL + + Q ++ W P Sbjct: 542 --LDKPELDWMQ--PEMSFSELLINQLTATTQARIPEAIQAWLP 581 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 31/222 (13%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + DD T LI+ L G+ + I +AI + K KPV + S Sbjct: 99 DIVDNIRQAKTDDKITGLILKLDDFIGADQPSMQYIGKAINEFKTSGKPVYSISDSYNQS 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I + VG G Y K LD L V+ + K+ P Sbjct: 159 -QYYLATYADKIYLSPQGTVGLYGYSTNNLYYKSLLDSLKVTTHIFRVGTYKSAVEPVMR 217 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +++P A + V+ +H ++ ++ +R + + ++ GA Sbjct: 218 DDMSPAAREADSLWVNGLWHNYLNTIAINRKLSVHQ--------VFPGA----------- 258 Query: 228 GGQEEVWQSLYALGVDQSI----RKIKDWNPPKNYWFCDLKN 265 EE+ L A G D + RK+ D+ P+N ++ Sbjct: 259 ---EEMIADLRAAGGDNAQYALKRKLVDYVAPRNIIESEMTK 297 >gi|257487556|ref|ZP_05641597.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331012625|gb|EGH92681.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 332 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|289671962|ref|ZP_06492852.1| peptidase S49, SppA [Pseudomonas syringae pv. syringae FF5] Length = 332 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 21/293 (7%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + ++ ++++ V + S H A I ++G I D ++ ++ +++ Sbjct: 50 FKLLTFAFLFVAVI---VPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQK 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 107 AFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Q Sbjct: 167 AADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q V+D+++ F+ V + R + + L G IWTG +A +GL+D +G V Sbjct: 227 FWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLGSASYVA 286 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 287 RDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|26988637|ref|NP_744062.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida KT2440] gi|24983418|gb|AAN67526.1|AE016381_3 peptidase, putative [Pseudomonas putida KT2440] Length = 329 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 10/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L ++ H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +DD A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 103 EAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPEKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q V+D+++ F+ +V + R + + L G IW+G +AK +GL+D +G V Sbjct: 223 RFWQGVLDTTHRQFIAMVKQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGLGSASYV 282 Query: 234 WQSLYA 239 + + Sbjct: 283 AREIVG 288 >gi|120554791|ref|YP_959142.1| peptidase S49 [Marinobacter aquaeolei VT8] gi|120324640|gb|ABM18955.1| peptidase S49 [Marinobacter aquaeolei VT8] Length = 349 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 123/274 (44%), Gaps = 15/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K+ T + +L+ + F H A + + G I + L+ + Sbjct: 66 IFFKLLTFGYLFALLFMIRAPF-GEGVGATVGSHTALVEVNGPIAADELASADNLVGALR 124 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 +S+ A+++ ++SPGGS ++ I++++ K + + ++ AS Y I+ Sbjct: 125 AAFEAESSKAVVLRINSPGGSPVQSGYVYDEIKRLREEYPDKKIYAVISDIGASGAYYIA 184 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A SLVGSIGV+ ++K+GV + + KA PFS + V Sbjct: 185 AAADEIYANRASLVGSIGVVAGGFGFTEAMEKIGVDRRLYTAGDNKAFLDPFSPEQEEEV 244 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q V+++++ F+ V + R L G +W+G +A ++GL+D +G V + Sbjct: 245 AFWQSVLENTHKQFIEAVRQGRGDRLADDPRLFSGLVWSGEQAVELGLVDGLGSSSWVAR 304 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 L ++ D++ ++ + + L ++ Sbjct: 305 QLVG------EEELVDYSRSRSPFQEFVDQLGVA 332 >gi|330962630|gb|EGH62890.1| peptidase S49, SppA [Pseudomonas syringae pv. maculicola str. ES4326] Length = 332 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + + + + H A I ++G I D ++ ++ + Sbjct: 48 IFFKLLTFVFL--FVAVVLPMLDFEGGTSRRASHTALIDVQGVIADKESASAENIVTALR 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 DAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAEKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKTDET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQSVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVGLGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKNIVEYTVEESPFDRFSKKLGAS--IAERIAMLVGFNGPVL 331 >gi|238788465|ref|ZP_04632258.1| Protease 4 [Yersinia frederiksenii ATCC 33641] gi|238723378|gb|EEQ15025.1| Protease 4 [Yersinia frederiksenii ATCC 33641] Length = 624 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 26/283 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + +A + G I D L +I + D A+I+ + Sbjct: 319 IYDYQPTPAPQQGEQIAVLFANGAIMDGPQTPGNVGGDALAAQIRQARLDPKIKAVILRV 378 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L GSI Sbjct: 379 NSPGGSVSASELIRSELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSI 438 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + L+ +GV V +SP+ A S ++ P+ QMMQ +++ Y F+ L Sbjct: 439 GIFGVINTFQNSLESIGVHTDGVATSPL-ANVSMTKDLPPEFSQMMQINIENGYKTFIDL 497 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K W Sbjct: 498 VATSRHKTPEQVDQIAQGHVWIGMDAKNNGLVDQLGDFDDAVNKVAELA------KLKTW 551 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 + WF D +LS I + ++ + +Q W P Sbjct: 552 ---QLNWFVDEPSLSDLIFGQMSASVQAILPAAIQA----WLP 587 Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 21/222 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++E I D++ T L++SLS G+ + I +A+++ ++ KP+ + Sbjct: 105 DIVETIRLAKTDNNITGLVLSLSDFTGADQPSLQYIGKALREFRDTGKPIYAIGDSYNQT 164 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 165 -QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPMIR 223 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ VS +R + ++ + G + +G + A Sbjct: 224 DDMSPAAREADSRWIGGLWQNYLTAVSANRQLTPEQLFPGAAG-VISGLQAADGSPAQYA 282 Query: 219 KKVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNP 254 L+D + + E+ L D + I D+ P Sbjct: 283 LTSKLVDQLASRPEMETELVKTFGWDKKNNDFNYVSIYDYQP 324 >gi|66044886|ref|YP_234727.1| peptidase S49, SppA [Pseudomonas syringae pv. syringae B728a] gi|63255593|gb|AAY36689.1| Peptidase S49, SppA [Pseudomonas syringae pv. syringae B728a] Length = 332 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 21/293 (7%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + ++ ++++ V + S H A I ++G I D ++ ++ +++ Sbjct: 50 FKLLTFAFLFVAVI---VPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQK 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 107 AFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Q Sbjct: 167 AADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 227 FWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYVA 286 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 287 RDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|218442231|ref|YP_002380560.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7424] gi|218174959|gb|ACK73692.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7424] Length = 274 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 12/268 (4%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S +ARI I G I +++++ ++++ + AL++ + SPGG+ + I++A+++ Sbjct: 10 SKQIARIEITGVIASETRKQVLKALDKVEQ-KKYRALLLRIDSPGGTVGDSQEIYQALRR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + ++ ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+G+S Sbjct: 69 LHDKVKIVASFGNISASGGVYIGMGAQHIVANPGTITGSIGVIIRGNNLERLLDKIGISF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K VKS P K S E+ + ++Q+++D SY FV+ V++SRN+P + +DGRI Sbjct: 129 KVVKSGPYKDILSFDRELTSEEQGILQEMIDISYQQFVQTVAQSRNLPLETVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDL------KN 265 +TG +A ++G+ID +G +E+ + L L G+ K + PK L Sbjct: 189 FTGEQALELGVIDRLGTEEDARRWLAELVGLAPDKTKCQTIEEPKPLLNRILGGRRSQTK 248 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWNP 293 S+ + L + T Q LW ++ P Sbjct: 249 SSLGAALNW-VEFELATNNQPLW-LYRP 274 >gi|328951771|ref|YP_004369105.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] gi|328452095|gb|AEB07924.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 67/271 (24%), Positives = 126/271 (46%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 V + + V L V+ + S V + + G I D++ + +++ + Sbjct: 9 VFLLLGAVILFFIGVALLVLPLAGDSLPLAKGDRVGVVEVSGLIRDAKTTLNHLKKFREN 68 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + A++V ++SPGG+ + I + + + +K V+ + +AAS GY I ++II+A Sbjct: 69 NRIRAIVVRVNSPGGAVGPSQEILEEVIRTREKKKVVASLGTVAASGGYYIVSGADIIMA 128 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +L GSIGV+ + V+ L K+G+ + ++K+ K SP + P + +Q ++D Sbjct: 129 NPGTLTGSIGVIMNFTNVEQLLSKIGLELFNLKAGKYKDVGSPLRPMTPVEKEYIQGLLD 188 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + + F+R V+ R + K + DGRI+TG E K +GL+D +G + LG Sbjct: 189 NVHEQFIRDVAHGRRMLVHKVREVGDGRIFTGEEGKNLGLVDALGNLPDAIDLAGRLGGI 248 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + + K F L +L Sbjct: 249 KGKVEAVYPPKEKLSLFGLLFGDDPEEILAR 279 >gi|150024502|ref|YP_001295328.1| protease IV (signal peptide peptidase) [Flavobacterium psychrophilum JIP02/86] gi|149771043|emb|CAL42510.1| Protease IV (signal peptide peptidase) [Flavobacterium psychrophilum JIP02/86] Length = 587 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 122/242 (50%), Gaps = 9/242 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSP 76 + S+ + +A I +G+I + + ++ +DD+ A+++ ++SP Sbjct: 292 ATSTSDSNTKDKIAVIYAQGEIGSGEGDINTVGEGSMRRSLQEARKDDNIKAIVLRVNSP 351 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA + I+R I+ K KPVI + +AAS GY I+C +N I A +++ GSIGV Sbjct: 352 GGSALTSDLIWREIEITKKVKPVIVSMGNLAASGGYYIACNANKIFAEASTITGSIGVFG 411 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P + K G++ + V++ + S F + Q+ Q+ V+ Y+ FV V++ Sbjct: 412 TLPNLSAVTKKYGINTELVETHENASGYSLFKPLEDNFRQITQEGVEHIYNVFVTRVAKG 471 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + + + ++ GR+W G++A ++GL+D +GG ++ L + + K Sbjct: 472 RKMTFAQVDAIAQGRVWAGSDALRLGLVDKIGGLDDALAYASNLVKLKEYSTVDYPKYEK 531 Query: 257 NY 258 ++ Sbjct: 532 DF 533 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 88/209 (42%), Gaps = 8/209 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++++ I+ DD + + ++ +A+ ++ K I + + Sbjct: 79 DILKAIDAAKTDDKIKGISILNNTLALGVAQTKALRDELEIFKKSGKFIMAYGNVYSQKD 138 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ +N + + G+ + Y K F DK G+ ++ ++ K+ PF +E Sbjct: 139 YYLNSVANTVYLNPVGELDFKGLSTEVMYYKDFQDKTGLKMEVIRHGKYKSAVEPFLLNE 198 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGAEAKKVGLIDVVG 228 ++P+ + + S ++ V +S+SR I + ++ G + T A K LID + Sbjct: 199 MSPENRDQITTFLTSIWNSMVNDISKSRKISIAQLNTIATGLLARTPELALKNKLIDKIA 258 Query: 229 GQ----EEVWQSLY-ALGVDQSIRKIKDW 252 + +++ ++L A D I D+ Sbjct: 259 YEDVYHDDIRKALKVAANEDYKTVNIIDY 287 >gi|67925053|ref|ZP_00518433.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Crocosphaera watsonii WH 8501] gi|67853100|gb|EAM48479.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Crocosphaera watsonii WH 8501] Length = 596 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 11/241 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAYA 82 ++ +A + + G I D E+I +I D A+++ ++SPGGSA Sbjct: 304 NSSNKKIAVVYLEGSIVDGVGTREQIGTSRFEKILRKIREDKQVKAVVLRINSPGGSATG 363 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I R +Q ++ +KPVI + +AAS GY I+ I A ++ GSIGV ++ Sbjct: 364 SDIILREVQLIQEKKPVIISMGNVAASGGYWIATGGEHIFAQPNTITGSIGVFGLLFNIQ 423 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ VK+ + + + + Q V+ Y F+ V+ESR++ + Sbjct: 424 EVANNNGITWDVVKTGKFADLGTVRRPKTEQELAIYQKSVNRVYDLFLEKVAESRDLAKE 483 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 K ++ G++W+G AK +GL+D GG + Q + +IK + P + F Sbjct: 484 KVADIAQGKVWSGKTAKNIGLVDSFGGLDAAIQYAVEQAELGTDWEIKSY--PSSPRFAG 541 Query: 263 L 263 L Sbjct: 542 L 542 Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 115/267 (43%), Gaps = 27/267 (10%) Query: 3 FVLKKIKTRYVMLSLVTL------------TVVYFSWSSHVEDNSPHVARIAIRGQIEDS 50 F+ + +++ L+TL +V+ S+ + D P + I + D Sbjct: 19 FLFATLGVSSLVILLITLASVDTEPTIKDKSVLVLDLSTEIRDREP---MVNISDILSDR 75 Query: 51 Q-------ELIERIERISRDDSATALIVS-LSSPGGSAYAGE-AIFRAIQKVKNRKPVIT 101 Q ++++ IE+ S+D A+ + ++ GS YA I A+ K K I Sbjct: 76 QRSVLTLNQVVKNIEKASKDSRIEAIFLDGSNASAGSGYANFAEIREALIKFKESGKKII 135 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 Y ++ ++ ++ L+ G+ + + DK G+ ++ V+ K Sbjct: 136 AYDVTLTEQEYYLTSLADTLIVHPMGLMELNGIGTESLFWTGAFDKYGIGVQVVRVGDYK 195 Query: 162 AEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEA 218 + P++ E++ + Q +Q ++ S ++ +++ V ESR I + ++D + + EA Sbjct: 196 SAVEPYTRTELSAENRQQLQVLLGSIWNNYLQEVGESRQINPNDLQKVADNQGVLVPEEA 255 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQS 245 + + LID + +++ L + +Q Sbjct: 256 QNLKLIDQIDYRDKAISILQEITGNQE 282 >gi|119511127|ref|ZP_01630245.1| protease IV [Nodularia spumigena CCY9414] gi|119464222|gb|EAW45141.1| protease IV [Nodularia spumigena CCY9414] Length = 611 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 9/229 (3%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ +A + G+I D + ++ D+ A+++ ++SPGGSA A Sbjct: 314 NSQNKIAVVYAEGEIVDGRGEDQQIGGDRFARILNQLRHDNDVKAVVLRINSPGGSATAS 373 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E + R +Q + KPV+ + ++AAS GY I+ SN I A T++ GSIGV + Sbjct: 374 EIMQREVQLTREVKPVVVSMGDIAASGGYWIATDSNRIFAEPTTITGSIGVFGVLLNGQK 433 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + G++ +VK++ +P +P+ +++ Q V+ Y+ F+ V + RN+P K Sbjct: 434 LANDNGITWDTVKTARYADSQTPTRPKSPQELEIYQRSVNRIYNLFLDRVVQGRNLPAPK 493 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 ++ GR+W+G AK++GL+D +GG + + +++++ Sbjct: 494 VAEIAQGRVWSGISAKQIGLVDEIGGLNAAIEYAAKEAKLDNDWELQEY 542 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 21/276 (7%) Query: 21 TVVYFSWSSHVEDNSP------HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++V F S ++ D P A + +++ +E+ D + L Sbjct: 51 SIVVFDLSMNITDTPPGSSELLQQALSGAEAPRMTLRSVLDTLEKARLDPRIVGI--YLD 108 Query: 75 SPGGSAYAGE------AIFRAIQKVKNR-KPVITEVHEMAASAG-YLISCASNIIVAAET 126 + G SA I +A++K + K V+ + S Y +S ++ I Sbjct: 109 ATGTSASGNMGFASLTEIRQALKKFRESGKKVVAY--GVGLSEKDYYLSSVADTITLNPI 166 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDS 184 L+ G+ Q ++ LDK G+ ++ V+ K PF E++P+ Q +Q ++D Sbjct: 167 GLMEVNGLTSQPTFLAGALDKFGIGVQVVRVGKFKGAVEPFILQELSPENRQQIQKLLDD 226 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + + VS SR + + ++D + + T EAK+ GL+D VG +EV L L Sbjct: 227 VWGDWRTTVSSSRKMTPQQLQAIADTQALLTATEAKERGLVDQVGYLDEVVNDLKKLTAS 286 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 + + +NY K+L + ++ I ++ Sbjct: 287 DETDRTFEQINLRNYAQVPGKSLGVERNSQNKIAVV 322 >gi|330952680|gb|EGH52940.1| peptidase S49, SppA [Pseudomonas syringae Cit 7] Length = 332 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTF--AFLFVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|148549012|ref|YP_001269114.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida F1] gi|148513070|gb|ABQ79930.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida F1] Length = 329 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 10/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L ++ H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILALFSPLMDMDKAASRSASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +DD A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 103 EAFKDDKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGAMEKLGVERRAYTSGEHKAFLDPFSPEKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q V+D+++ F+ +V + R + + L G IW+G +AK +GL+D +G V Sbjct: 223 RFWQGVLDTTHQQFIAMVKQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGLGSASYV 282 Query: 234 WQSLYA 239 + + Sbjct: 283 AREIVG 288 >gi|146282967|ref|YP_001173120.1| putative peptidase [Pseudomonas stutzeri A1501] gi|145571172|gb|ABP80278.1| putative peptidase [Pseudomonas stutzeri A1501] gi|327481318|gb|AEA84628.1| putative peptidase [Pseudomonas stutzeri DSM 4166] Length = 327 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 18/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + + L H A I +RG I D + ++ + Sbjct: 41 IFFKLLTFIYLFGALALFSPALQLGKGKAARESHTAVINVRGMIADEESASADNIVGALR 100 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D + +I+ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 101 AAFEDANTKGVILRINSPGGSPVQSGYIYDEIRRLRGEYPAIKVYAVITDLGASGAYYIA 160 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A ++SLVGSIGV ++KLGV + + KA PF P+ Sbjct: 161 SAADEIYADKSSLVGSIGVTAATFGFVDTMEKLGVERRVYTAGEHKAFLDPFQPEKPEET 220 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKT--LVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + V+ +++ F+ V R L G IW+G +A ++GL+D +G V Sbjct: 221 RFWRSVLATTHQQFIDSVKRGRGERLQDAQHPELFSGLIWSGEQALELGLVDGLGSTAYV 280 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + +I D+ ++ + K L S + + + ++ + L Sbjct: 281 AREVVG------EPEIVDFTVKESPFDRFTKKLGTS--VAERLAILAGLQGPAL 326 >gi|297618458|ref|YP_003703617.1| signal peptide peptidase SppA, 36K type [Syntrophothermus lipocalidus DSM 12680] gi|297146295|gb|ADI03052.1| signal peptide peptidase SppA, 36K type [Syntrophothermus lipocalidus DSM 12680] Length = 295 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 135/273 (49%), Gaps = 15/273 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------QELIERI 57 + +L L S S+ + + + I G + + +E++E + Sbjct: 11 VAFCLAVLVLAVKWSPDTSGSASMVGAGGAIGVVRIEGVLSGASQGYGGATQTEEIMEAL 70 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 + D A+++ + SPGGSA A + I R I+++K + KP++ + ++AAS GY ++ Sbjct: 71 REAGKRDDIKAVLIRIDSPGGSAVAAQEIAREIERLKKKGKPLVASMGDVAASGGYWVAA 130 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + + I A + GSIGV+ + ++ ++G+ + +KS K S +++P+ + Sbjct: 131 SCDEIFANPATTTGSIGVITEQVNLEELFSRMGIETEVIKSGSYKDMGSITRKLSPEERK 190 Query: 177 MMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +++++VD Y F+ V + R + D+ ++DGR+ TG +AK++GL+D +G + Sbjct: 191 LLEELVDDVYQQFLLQVEKGRRGKMSPDEIRTIADGRVMTGNKAKQIGLVDHLGNYYDAL 250 Query: 235 QSLYALGVDQSIRKIKDWNP--PKNYWFCDLKN 265 + L ++ + NP P + F L N Sbjct: 251 ERTKELANLSGEPQVIELNPQDPFSKVFSQLLN 283 >gi|218258308|ref|ZP_03474710.1| hypothetical protein PRABACTJOHN_00365 [Parabacteroides johnsonii DSM 18315] gi|218225548|gb|EEC98198.1| hypothetical protein PRABACTJOHN_00365 [Parabacteroides johnsonii DSM 18315] Length = 522 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 14/217 (6%) Query: 38 VARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A + G+I D S+E+ ++ ++ DD A++ ++SPGGSAY Sbjct: 306 IAVLYAEGEIRDEDSSSPFSADEQVISEEMANKLRKLKDDDDVKAVVFRVNSPGGSAYIS 365 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I++ + ++K +KP++ + AAS GY ISCA+N IVA T+L GSIGV Sbjct: 366 EQIWKEVVELKAKKPIVVSMGNYAASGGYYISCAANKIVAERTTLTGSIGVFGVVRNFTG 425 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+GV+ VK++ + ++Q V+ +Y F+ ++ R + + Sbjct: 426 TFDKVGVTTDVVKTNTFADLGDMSRPMREDEKALIQRGVEQTYDLFLTRCADGRGMTKAE 485 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + GR+WTG +A + GL+D +GG ++ + L Sbjct: 486 IDSIGQGRVWTGEQALERGLVDQLGGMDDAIKEAATL 522 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 88/263 (33%), Gaps = 29/263 (11%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-------------------ELIE 55 + + SS + + V ++++ G + D ++I+ Sbjct: 27 IFFIIGVAASADGSSEYKPDKNTVFKLSLDGVLVDQTVKNPFSELMGESSNQMAVSDVIK 86 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 I R +D+ + + S EAI R + K+ I + Y + Sbjct: 87 AIRRAKANDNIKGIYLEAGSLSTGFAGIEAIRRELVDFKDSGKFIVSYGDFYTQGSYYLC 146 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPK 173 ++ + V +G+ Q + +K+GV K K+ PF + + Sbjct: 147 SVADSVFLNPQGSVSLVGLASQGIFFTGLAEKVGVEHYIFKVGTYKSAVEPFFLKKFSDA 206 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-----LVLSDGRIWTGAEAKKVGLIDVVG 228 + + + S + + +SRNI D+ L+ G+ + A L D + Sbjct: 207 NREQLTSFLGSVWGNLTTAIEKSRNISSDELNRYLNEGLAMGQ---ASNAIDYKLADGLR 263 Query: 229 GQEEVWQSLYALGVDQSIRKIKD 251 + EV + + K+K Sbjct: 264 YRYEVENCVKEMAGQDVKGKLKT 286 >gi|270262164|ref|ZP_06190436.1| protease 4 [Serratia odorifera 4Rx13] gi|270044040|gb|EFA17132.1| protease 4 [Serratia odorifera 4Rx13] Length = 618 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 22/278 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y D +A + G I D + + D S A++ + Sbjct: 313 IYDYQPKPTPDQGGKIAVVFANGAIMDGPQTPGAVGGDTTAAELRQARLDPSIKAVVFRV 372 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + V+ KPV+ + MAAS GY +S ++ I+A+ ++L GSI Sbjct: 373 NSPGGSVSASEVIRSELAAVRAAGKPVVVSMGGMAASGGYWVSTPADYIIASPSTLTGSI 432 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + LD +GV V +SP+ + + P+ QMMQ +++ Y F+ L Sbjct: 433 GIFGVINTYEQTLDSIGVHTDGVATSPLAD-LAVTKALPPEFSQMMQLNIENGYKNFIDL 491 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++SR + + ++ G +W G++AK GL+D +G ++ + L K+K W Sbjct: 492 VAKSRKMTPQQVDQIAQGHVWLGSDAKANGLVDQLGDFDDAVKKAAELA------KLKQW 545 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 + WF D +L+ + S +I M +Q + Sbjct: 546 ---QLNWFVDTPSLTDMVLSQFGVSIHAMLPAAIQSML 580 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 86/226 (38%), Gaps = 21/226 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D + T +++ L+ G+ + I +A+++ ++ KP+ + Sbjct: 99 DVVDSIRKAKDDKNITGMVLQLNDFAGADQPSLQYIGKALREFRDSGKPIFAIGDSYNQT 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N + + V G Y K L+KL V+ + K+ P Sbjct: 159 -QYYLASYANKVYLSPQGAVDLHGFATNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPLIR 217 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ V+ +R I + + G + +G + A Sbjct: 218 DDMSPAAREADSRWIGGLWQNYLDTVAANRQITPQQLFPGAAG-VLSGLQAAGGDTAKFA 276 Query: 219 KKVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNPPKNY 258 L+D + + + L D + I D+ P Sbjct: 277 LDSKLVDELASRTVIENQLIKTFGWDKQANDFNATSIYDYQPKPTP 322 >gi|332525765|ref|ZP_08401912.1| peptidase S49 [Rubrivivax benzoatilyticus JA2] gi|332109322|gb|EGJ10245.1| peptidase S49 [Rubrivivax benzoatilyticus JA2] Length = 331 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 16/286 (5%) Query: 7 KIKTRYVMLSL-VTLTVVYFS-WSSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 ++ R++ L+L V L S + + PH A + +RG+I ++ L+ + Sbjct: 50 RLFFRFIWLALAVALAWGLMSERFTPTAPSRPHTALVEVRGEIAPGSEASAELLVSALRS 109 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCA 117 D A A+++ ++SPGGS + I+++K ++K V V EM AS Y I+ A Sbjct: 110 AFEDQGAQAVVLRINSPGGSPVQAGIVNDEIRRLKVLHQKKVYAVVEEMCASGAYYIAVA 169 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + SLVGSIGVL +DKLG+ + + + K P+S N + Sbjct: 170 ADEIYVDKASLVGSIGVLMDGFGFTGLMDKLGIERRLLTAGENKGMLDPYSPQNEQQTAY 229 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++D + F+ +V + R +T G W G EA ++GL D +G + V + + Sbjct: 230 AKAMIDQIHQQFIAVVRQGRGKRLQETPETFSGLFWNGEEAVRLGLADKMGNLDYVAREV 289 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 + D+ P +N L +++ E + M+Q Sbjct: 290 V------KAEDVVDYTPREN-VAERLAKRFGAAMGEGAVKAMRQVS 328 >gi|238797349|ref|ZP_04640849.1| Protease 4 [Yersinia mollaretii ATCC 43969] gi|238718780|gb|EEQ10596.1| Protease 4 [Yersinia mollaretii ATCC 43969] Length = 598 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A I G I D L +I + D A+I+ Sbjct: 291 ISIYDYQPTPTPQQGEQIAVIFANGAIMDGPQTPGNVGGDTLAAQIRQARLDPKIKAVIL 350 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ +KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 351 RVNSPGGSVSASELIRSELSALRAAKKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 410 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L+ +GV V +SP+ S ++ + QMMQ +++ Y FV Sbjct: 411 SIGIFGVINTFQNSLESIGVHTDGVATSPLADI-SITKDLPSEFSQMMQINIENGYKTFV 469 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + + L ++K Sbjct: 470 DLVATSRHKTPEQVDQIAQGHVWIGFDAKNNGLVDQLGDFDDAVKKVAELA------QLK 523 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 524 TW---QLNWFIDEPSLSDLIFGQMSASVQAMLPAAIQA----WLP 561 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++E I D++ +++SLS G+ + I +A+++ ++ KP+ + + Sbjct: 79 DVVETIRLAKTDNNINGMVLSLSDFTGADQPSLQYIGKALREFRDSGKPIYA-IGDSYNQ 137 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 138 NQYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLKVTTNIFRVGTFKSAVEPMIR 197 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ V+ +R + ++ + G + +G + A Sbjct: 198 DDMSPAAREADSRWIGGLWQNYLTAVAANRQLTPEQLFPGAAG-VISGLQTAGGSTAKYA 256 Query: 219 KKVGLIDVVGGQEEVWQSLYA 239 L+D + + ++ L Sbjct: 257 LDNKLVDQLASRPDMESELIK 277 >gi|218548665|ref|YP_002382456.1| protease 4 [Escherichia fergusonii ATCC 35469] gi|218356206|emb|CAQ88823.1| protease IV (signal peptide peptidase) [Escherichia fergusonii ATCC 35469] Length = 711 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + ++ ++ +P + + G I D +E +I D A++ Sbjct: 403 AISFYDYALKTPVKTPEMIGVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIV 462 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS +N I+A ++L Sbjct: 463 LRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIIANPSTLT 522 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + + QMMQ +++ Y F Sbjct: 523 GSIGIFGVINTVENSLDSIGVHTDGVSTSPLANM-SVTQSLPTEVQQMMQLSIENGYKRF 581 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 582 ITLVADARKSTPEQVDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WSI 640 Query: 250 KDWNPPKNYWFC--DLKNLSISSLLEDTIPLMKQTKV 284 + ++ D + S+ ++L I M + Sbjct: 641 NYYQDEPTFFDMVVDSMSGSVRAMLPQAIQAMLPAPL 677 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L L+ + + S+ D++ A + I G I D Sbjct: 120 LNLLFIFLVLIGVGIWMQVSSNGSSDSASRGALLLDISGVIVDKPSNNHRLGVIGRQLFG 179 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + G+ + I +A+++ ++ K Sbjct: 180 ASSERLQENSLFDIVNTIRQAKDDSNITGIVLDLENFAGADQPSMQYIGKALREFRDSGK 239 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PVI + E Y ++ +N I + V G Y K LDKL VS + Sbjct: 240 PVIA-IGESYTQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLKVSTHVFRV 298 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + V + ++ ++ +R I + + I Sbjct: 299 GTYKSAVEPFIRDDMSPAAREADSRWVGELWQNYLNTIAANRQISAQQVFPGAQAMIADL 358 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A L+D +G +V ++L D++ R I ++ Sbjct: 359 TKLGGDTAQYALDHKLVDALGSSADVEKALTKQFGWSKADKNYRAISFYD 408 >gi|254410663|ref|ZP_05024442.1| signal peptide peptidase SppA, 67K type [Microcoleus chthonoplastes PCC 7420] gi|196182869|gb|EDX77854.1| signal peptide peptidase SppA, 67K type [Microcoleus chthonoplastes PCC 7420] Length = 593 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 120/233 (51%), Gaps = 9/233 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGS 79 H + +A + G+I D + ++ ++ DDS A+++ ++SPGGS Sbjct: 299 EHQRASKNKIAVLYASGEIVDGEGSVQEVGGESFAAQMRKLRLDDSVKAVVLRVNSPGGS 358 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E I R ++ ++ KPVI + ++AAS GY IS N I A ++ GSIGV Sbjct: 359 ATASEIIQREVKLTRDSKPVIISMGDIAASGGYWISTYGNRIFAEPNTVTGSIGVFGLLM 418 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V+ ++ G++ VK+ + + + ++Q +VD Y F+ V+ESR + Sbjct: 419 NVQQIANENGITWDVVKTGRFADTQTVSRPKTTQELALIQKIVDQVYSKFLDKVAESRKL 478 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 P DK ++ GR+W+G +AK++GL+D +GG ++ + K++++ Sbjct: 479 PKDKVAQIAQGRVWSGIDAKQLGLVDEIGGLDDAIEYAVKEANLGEDWKLEEY 531 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 27/249 (10%) Query: 21 TVVYFSWSSHVEDNSPHVAR-----IAIRGQIEDS---QELIERIERISRDDSATALIVS 72 +V+ F S V D P + A+ G+ D+ +++I+ + + D + + Sbjct: 39 SVLVFDLSLTVRDTDPTSSTSRAIEEALSGEETDTITLRKVIDTLNTAAEDSRI--VALY 96 Query: 73 LS------SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAE 125 L S G + + A+++ K K +I + Y +S ++ IV Sbjct: 97 LDGSQTSTSSGTGFATLKEVREALERFKESGKKIIAYDVDSG-EGEYYLSSIADTIVLNP 155 Query: 126 TSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQD 180 GS+ G Q + L+K G+ I+ ++ K+ PF E++ + Q MQ Sbjct: 156 M---GSLEMNGFSSQPMFFTGALEKFGIGIQVIRVGKYKSAVEPFVLKELSQENRQQMQA 212 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ + F V +SR + + ++D + I ++A L+D VG +EV L Sbjct: 213 LLGDLWTEFRTTVGKSRQVTPQELQAIADTQGIVLASDAIGRRLVDKVGYYDEVIAQLQE 272 Query: 240 LGVDQSIRK 248 L + K Sbjct: 273 LTGESETEK 281 >gi|300311214|ref|YP_003775306.1| periplasmic serine protease [Herbaspirillum seropedicae SmR1] gi|300073999|gb|ADJ63398.1| periplasmic serine protease (ClpP class) protein [Herbaspirillum seropedicae SmR1] Length = 343 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 16/272 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDN--SPHVARIAIRGQIEDSQE-----LIERIERI 60 + R +L++V L V + +E+ PH A + I+G I+ + +I +++ Sbjct: 60 VFFRIALLAVVVLGVWMAFTFNRIENEPLGPHTALVEIKGAIDSEGQGSAGVVIPALDKA 119 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCA 117 + + +I+ ++SPGGS I I +++ +KP+ V E+ AS GY I+ A Sbjct: 120 FAANDSVGVILKINSPGGSPVQAGMINDEITRLRKQYPKKPIYVVVEEVCASGGYYIAAA 179 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + SLVGS+GVL +DKLGV + + + K+ PFS +PK + Sbjct: 180 ADKIFVNKASLVGSVGVLMDGFGFTGLMDKLGVERRLLTAGENKSFLDPFSPQSPKQREY 239 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++ + F+ +V + R +T G +WTG++A ++GL D G + V + Sbjct: 240 AQSMLQEIHQQFIEVVRQGRGARLKETPDTFSGLVWTGSKAVELGLADGFGTVDSVARD- 298 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + D+ +N LK ++ Sbjct: 299 -----EIKAEDVVDYTQTENLSERVLKKFGVA 325 >gi|113868537|ref|YP_727026.1| periplasmic serine protease (ClpP class) [Ralstonia eutropha H16] gi|113527313|emb|CAJ93658.1| periplasmic serine protease (ClpP class) [Ralstonia eutropha H16] Length = 394 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 17/292 (5%) Query: 7 KIKTRYV---MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 +I R+V +L+L+ +T+ F + + H A + + G+I ++ + ++ Sbjct: 108 RIFFRFVGLALLALILVTLFDFKGDGAISTSGRHTAMVTLEGEIAAGTPASAESINASLQ 167 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 D +A +I+ ++SPGGS I IQ+++ KP V E+ AS GY ++ Sbjct: 168 AAFADGNAAGVILKINSPGGSPVQAGIINDEIQRLRTLYPSKPFYVVVEEICASGGYYVA 227 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 228 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPKQK 287 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ + F+ +V E R L G W+G A ++GL D +G + V + Sbjct: 288 AFAEAMLKQIHQQFIDVVKEGRGDRLKDDPELFSGLFWSGERAVELGLADGLGSADYVAR 347 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + I D+ +N K + ++ ++QG+ Sbjct: 348 DVL------KAEDIVDYTVKENIAERVAKRFGAAVGSAAMKTMLWSNRMQGM 393 >gi|330861582|emb|CBX71777.1| protease 4 [Yersinia enterocolitica W22703] Length = 510 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 26/283 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + +A + G I D L +I + D A+I+ + Sbjct: 204 IYDYQPTPTPQQGEQIAVLFANGAIMDGPQTPGNVGGDALAAQIRQARLDPKIKAVILRV 263 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L GSI Sbjct: 264 NSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSI 323 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + L+ +GV V +SP+ A S ++ P+ QMMQ +++ Y F+ L Sbjct: 324 GIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLPPEFSQMMQINIENGYKTFIDL 382 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ +R+ ++ ++ G +W G +AK GL+D +G ++ + + L K+K W Sbjct: 383 VASARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFDDAVKKVAELA------KLKTW 436 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 + WF D +LS I + ++ M T +Q W P Sbjct: 437 ---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQA----WLP 472 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 83/223 (37%), Gaps = 29/223 (13%) Query: 63 DDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 D++ T +++SL G + I +A+++ ++ KP+ + + Y ++ Sbjct: 1 DNNITGMVLSL----GDFTGADQPSLQYIGKALREFRDSGKPIYAIGESYSQT-QYYLAS 55 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKA 174 +N I + V G Y K L+KL V+ + K+ P +++P A Sbjct: 56 FANKIYLSPHGTVALHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPMIRDDMSPAA 115 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------AKKVGLID 225 + + + ++ V+ +R + ++ G + +G + A L+D Sbjct: 116 READTRWIGGLWQNYLTAVAANRQLTPEQLFPGGAG-VVSGLQAAGGSQAQYALSSKLVD 174 Query: 226 VVGGQEEVWQSLYAL------GVDQSIRKIKDWNPPKNYWFCD 262 + + E+ L D + I D+ P + Sbjct: 175 QLATRPEMENELVKAFGWDKKNNDFNYVSIYDYQPTPTPQQGE 217 >gi|322832766|ref|YP_004212793.1| signal peptide peptidase SppA, 67K type [Rahnella sp. Y9602] gi|321167967|gb|ADW73666.1| signal peptide peptidase SppA, 67K type [Rahnella sp. Y9602] Length = 617 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 14/276 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIV 71 ++ +S ++N P +A I G I D +E ++I D A+++ Sbjct: 310 SIYDYSPKPKPDNNDPQIAVIFATGAINDGEEQPGAVGGDTTAQQIRDARLDPKVKAIVL 369 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + K KPV+ + MAAS GY IS +N I+A+ ++L G Sbjct: 370 RVNSPGGSVSASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIIASPSTLTG 429 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + LD GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 430 SIGIFGVINTYQNTLDYAGVHTDGVATSPLADIAS-TKALPPEFSQMMQLNIENGYKTFL 488 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV++SR+ ++ ++ G +W G++AK GL+D +G ++ + L + Sbjct: 489 GLVADSRHKTPEQIDQIAQGHVWIGSDAKANGLVDELGDFDDAVKKAAELAKLPKWQLNW 548 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + P DL +S+ + +P Q + Sbjct: 549 YVSEPS---LSDLVFSQVSASVHAMLPAAIQAYLPA 581 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 110/304 (36%), Gaps = 48/304 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + FV + I +++L ++ ++++ + + + + G + D Sbjct: 19 LNFVREFILNVFLILIILAGVGIWYAVQDKPVETTQGALLVDLSGSVVDKPSVNNKVRQW 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 +L+E I D + T +++ L+ G+ + + I +A+++ Sbjct: 79 GRELLGTSSSRLQENSLFDLVETIRSAKDDKNVTGIVLQLTDFTGTDQSSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 ++ KPV S Y ++ +N I + V G Y K LDKL V+ Sbjct: 139 FRDAGKPVYAIGDSYNQS-QYYLASYANKIYLSPQGAVDLHGFATNNLYYKSLLDKLKVT 197 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + K+ P +++P A + + + ++ VS +R I ++ + Sbjct: 198 TNIFRVGTYKSAVEPLIRDDMSPDAREADSRWIGGLWTNYLNTVSANRQITPEQLFPGAA 257 Query: 210 GRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 G + G + A K L+D + + E + D + I D++P Sbjct: 258 G-VLAGMQATGGDMAQYALKAKLVDALASRTEADNEMVKAFGWNKDTKDFNYTSIYDYSP 316 Query: 255 PKNY 258 Sbjct: 317 KPKP 320 >gi|85859094|ref|YP_461296.1| signal peptide peptidase [Syntrophus aciditrophicus SB] gi|85722185|gb|ABC77128.1| signal peptide peptidase [Syntrophus aciditrophicus SB] Length = 309 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 126/247 (51%), Gaps = 4/247 (1%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + + I G I+DS ++++ ++ +DDS +++ ++SPGG + I+ A+ + Sbjct: 38 TTADKIGIAPIDGVIKDSTDVVKNLQEFGKDDSVKGVVLRINSPGGGVAPSQEIYEAVME 97 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ +K V+ + +AAS GYLI+CA I+A +L GS+ + + + + K+GV Sbjct: 98 LRKKKRVLVSMSSVAASGGYLIACAGEKIIANPGTLTGSVSAIMYFTNAEELMKKVGVKA 157 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++KS K SP E+ + ++Q +VD Y F+ +V +R I + ++DGRI Sbjct: 158 STIKSGKYKDIGSPIREMTGEEKALLQGLVDDIYIQFLDVVVRNRRISEEALKQIADGRI 217 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 +TG +A+++GL+D +G E + L + G + K + +Y+F + Sbjct: 218 FTGKQAQQLGLVDYLGDMEYAVRMLAKMVGISGEPVVVYPQKKYESMLDYFFERAGSTMA 277 Query: 269 SSLLEDT 275 D Sbjct: 278 HVFFRDQ 284 >gi|217964261|ref|YP_002349939.1| exfoliative toxin [Listeria monocytogenes HCC23] gi|290894491|ref|ZP_06557447.1| peptidase [Listeria monocytogenes FSL J2-071] gi|217333531|gb|ACK39325.1| exfoliative toxin [Listeria monocytogenes HCC23] gi|290555946|gb|EFD89504.1| peptidase [Listeria monocytogenes FSL J2-071] gi|307571171|emb|CAR84350.1| signal peptide peptidase, putative [Listeria monocytogenes L99] Length = 337 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 129/267 (48%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGDDTIAVLSVDGTIQDTGDSGSLLGGGGYDHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + +K ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMSAEKVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLADATVIQYDAPE 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|58617362|ref|YP_196561.1| putative protease IV [Ehrlichia ruminantium str. Gardel] gi|58416974|emb|CAI28087.1| Putative Protease IV [Ehrlichia ruminantium str. Gardel] Length = 289 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 149/226 (65%), Gaps = 1/226 (0%) Query: 12 YVMLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 ++M+ L+ + Y SS ++ ++A++ I G+IE ++E+ + +++I++D LI Sbjct: 24 FLMVFLILILSNYVDTSSVSNFLDNEYIAKVNIEGKIETNEEMDKLLKKIAKDTHIKGLI 83 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++++SPGG+ E +++ I+ V KPV+ +++ AAS GY+ + A++ I+A T++ G Sbjct: 84 LNINSPGGAVTGSEILYQNIRNVSKYKPVVALLNDFAASGGYMTAIAADYIIARHTTITG 143 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGVL QY + KLG+++KS+KSS +KA SPF E+ + Q ++ +++ SY++FV Sbjct: 144 SIGVLMQYFGIDQLAKKLGITLKSIKSSELKAATSPFEELTQEKEQSVRHIINDSYNYFV 203 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +V+E R + ++ L ++DG I+TG+EA +GL+D +GG++E + Sbjct: 204 DIVAERRKMTKEQVLAIADGSIYTGSEALAIGLVDQIGGEDEALKW 249 >gi|16800695|ref|NP_470963.1| hypothetical protein lin1627 [Listeria innocua Clip11262] gi|16414114|emb|CAC96858.1| lin1627 [Listeria innocua Clip11262] Length = 337 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 129/267 (48%), Gaps = 16/267 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGDDTIAVLSVDGTIQDTGDSGSLFGDAGYDHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + KLGVS ++KS K S + ++MQ ++D SY+ FV++V++ Sbjct: 177 MQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + +K ++DGRI+ G +AK+ GLID G QE+ ++L I+ P Sbjct: 237 GRGMSAEKVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLADATVIQYDVPE 296 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQT 282 + IS D L+K T Sbjct: 297 DFSSLFSVAAQKISGQNADISQLIKLT 323 >gi|332161920|ref|YP_004298497.1| protease 4 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666150|gb|ADZ42794.1| protease 4 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 617 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 26/283 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + +A + G I D L +I + D A+I+ + Sbjct: 311 IYDYQPTPTPQQGEQIAVLFANGAIMDGPQTPGNVGGDALAAQIRQARLDPKIKAVILRV 370 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L GSI Sbjct: 371 NSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSI 430 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + L+ +GV V +SP+ A S ++ P+ QMMQ +++ Y F+ L Sbjct: 431 GIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLPPEFSQMMQINIENGYKTFIDL 489 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ +R+ ++ ++ G +W G +AK GL+D +G ++ + + L K+K W Sbjct: 490 VASARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFDDAVKKVAELA------KLKTW 543 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 + WF D +LS I + ++ M T +Q W P Sbjct: 544 ---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQA----WLP 579 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 88/234 (37%), Gaps = 29/234 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHE 105 +++E I D++ T +++SL G + I +A+++ ++ KP+ Sbjct: 97 DIVETIRLAKADNNITGMVLSL----GDFTGADQPSLQYIGKALREFRDSGKPIYAIGES 152 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + + Y ++ +N I + V G Y K L+KL V+ + K+ Sbjct: 153 YSQT-QYYLASFANKIYLSPHGTVALHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVE 211 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE------ 217 P +++P A + + + ++ V+ +R + ++ G + +G + Sbjct: 212 PMIRDDMSPAAREADTRWIGGLWQNYLTAVAANRQLTPEQLFPGGAG-VVSGLQAAGGSQ 270 Query: 218 ---AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNPPKNYWFCD 262 A L+D + + E+ L D + I D+ P + Sbjct: 271 AQYALSSKLVDQLATRPEMENELVKAFGWDKKNNDFNYVSIYDYQPTPTPQQGE 324 >gi|147921090|ref|YP_685099.1| putative periplasmic serine protease [uncultured methanogenic archaeon RC-I] gi|110620495|emb|CAJ35773.1| putative periplasmic serine protease [uncultured methanogenic archaeon RC-I] Length = 318 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSP-HVARIAIRGQI-----------EDSQELIERIERISR 62 + ++ ++ S + SP VA I + G++ S +++ + + Sbjct: 32 IFIIAQAGMFSDIFSDITPVSPSKVAVIYVEGELITDNIPDGLGYASSNSIVKHLRKAEE 91 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D S A+++ ++SPGG+ A + I+R I K KP++ + ++A SA Y IS IV Sbjct: 92 DKSIKAIVLRINSPGGTPVAAQEIYRQINKTSQVKPIVVSMGDIATSAAYYISAPCTKIV 151 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A + GSIGV++ + +K G+ KS P K + + +N + +++ Sbjct: 152 ANPDTFTGSIGVIWTFENKSGLYEKEGIQYYVAKSGPYKDVGADWRGLNENEKAYVNNII 211 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + SY FV V+ R++ ++ L+DGR++TG EA+ +GL+D +GG E LG Sbjct: 212 NQSYSRFVDAVASGRHMDREEVQRLADGRVYTGYEARDLGLVDDLGGMYEAIDIAAELGN 271 Query: 243 DQSIRKIKDWNPPKNY 258 ++ N P Y Sbjct: 272 ISGKPEVTYVNDPSLY 287 >gi|94971132|ref|YP_593180.1| signal peptide peptidase A [Candidatus Koribacter versatilis Ellin345] gi|94553182|gb|ABF43106.1| signal peptide peptidase A [Candidatus Koribacter versatilis Ellin345] Length = 303 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 7/287 (2%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 + ++ V + +A + + G I D + ++ ++++ D S Sbjct: 20 FFLFVAAIFVLVYVSVRADDHAQFTGFGDRIAVVDLEGVIVDPKSVVAQLKKYGDDSSIK 79 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAE 125 A+I+ ++SPGG A A E I+R +++V++ K ++ + + AS Y ++ A+N I A E Sbjct: 80 AIILHINSPGGGAAASEEIYREVRRVRDEKHKRIVASIETVGASGAYYVASATNKIYANE 139 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S+VGSIGV+ ++ L + ++K+ K SP ++ P MQ ++D Sbjct: 140 ASIVGSIGVIAEWYNYADLLKWAKLKEITMKAGEFKDTGSPTRDMTPAEKAYMQALIDDM 199 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE-EVWQSLYALGVDQ 244 + F+ V+ R + + ++DGR+WTG +A + LID + + V + ++G+ Sbjct: 200 HSQFIHNVATGRKVKDEDIRPIADGRVWTGRQALPMKLIDQIADFQATVADTAKSVGISG 259 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + K+ DL +S L+ D LM+ G + +W Sbjct: 260 EPTLVTPERERKS--LLDLMFGDVSDLIPDRAKLMQTNV--GFYYLW 302 >gi|238026598|ref|YP_002910829.1| peptidase, U7 family protein [Burkholderia glumae BGR1] gi|237875792|gb|ACR28125.1| Peptidase, U7 family protein [Burkholderia glumae BGR1] Length = 330 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 13/281 (4%) Query: 7 KIKTRYV-MLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R++ ++++V + + F +S + +S H A ++I G+I ++ ++ ++ Sbjct: 46 RIAFRFLWLIAVVAIMLAVFDFSGDGKLSSSRHTALVSIDGEIAAGNSANADDINSALDD 105 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 106 AFDDSGTVGVVLHINSPGGSPVQAGIVYDEIRRLRKKYPSKPLYVVVSDMCASGGYYIAA 165 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLGV + S K PFS PK + Sbjct: 166 AADRIYVNKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFYDPFSPETPKMDE 225 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F++ V + R + + G WTGA++ ++GL D G + V + Sbjct: 226 HAQSMLDEIHAQFIQAVKDGRGKRLHDSPDIFSGLFWTGAKSVELGLADGFGTTDSVARD 285 Query: 237 LYALGVDQSIRKIKDWNPPK--NYWFCDLKNLSISSLLEDT 275 + D +K+ + + + ++ S L D+ Sbjct: 286 VLK-APDIVDYTVKESLSSRVARRFGAAIGGGAVKSALSDS 325 >gi|206577621|ref|YP_002239066.1| protease 4 [Klebsiella pneumoniae 342] gi|288935968|ref|YP_003440027.1| signal peptide peptidase SppA, 67K type [Klebsiella variicola At-22] gi|290512774|ref|ZP_06552139.1| signal peptide peptidase SppA, 67K type [Klebsiella sp. 1_1_55] gi|206566679|gb|ACI08455.1| protease 4 [Klebsiella pneumoniae 342] gi|288890677|gb|ADC58995.1| signal peptide peptidase SppA, 67K type [Klebsiella variicola At-22] gi|289774657|gb|EFD82660.1| signal peptide peptidase SppA, 67K type [Klebsiella sp. 1_1_55] Length = 617 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D +A I G I D +E +I D A++ Sbjct: 309 AISYYDYNVKTPSDEGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 369 LRVNSPGGSVTASEIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S + P+ Q+MQ +++ Y F Sbjct: 429 GSIGIFGVINTVENTLGSIGVHTDGVATSPLADVSS-TKALPPEVQQLMQLSIENGYQRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R +K ++ G +WTG +AK GL+D +G ++ L ++ + Sbjct: 488 ITLVANARKSTPEKIDQIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKT-WHL 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + ++ S++ D++ + + W P Sbjct: 547 NYYQEEPTFF----------SMVLDSLTGSVRASLPAAIQAWLP 580 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 105/279 (37%), Gaps = 41/279 (14%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS--------- 50 + F+ K ++ ++ ++ +S+ +++ A + I G + D Sbjct: 19 LNFIRKLALNAIFLVLVLVCIGIWSQFSTTTSEHAARGALLLDITGVVVDKPSASSKLGV 78 Query: 51 ------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 ++++ I + D + T +++ L + GG + + I +A++ Sbjct: 79 IGRQLFGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLKNFVGGDQPSMQYIGKALR 138 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + ++ KPV V + Y ++ +N I + V G Y K LDKL V Sbjct: 139 EFRDSGKPVYA-VGSSYSQGQYYLASFANKIWLSPQGEVDLHGFATNGLYYKSLLDKLKV 197 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 S + K+ PF +++P A + + + ++ ++ +R I + + Sbjct: 198 STHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTIAANRQITAQQLFPGA 257 Query: 209 DGRI--------WTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G I T A L+D + EV ++L Sbjct: 258 QGIIDGLRKVGGDTAKYALDNKLVDELATSTEVEKALTK 296 >gi|318605561|emb|CBY27059.1| protease IV [Yersinia enterocolitica subsp. palearctica Y11] Length = 617 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 26/283 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + +A + G I D L +I + D A+I+ + Sbjct: 311 IYDYQPTPTPQQGEQIAVLFANGAIMDGPQTPGNVGGDALAAQIRQARLDPKIKAVILRV 370 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L GSI Sbjct: 371 NSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSI 430 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + L+ +GV V +SP+ A S ++ P+ QMMQ +++ Y F+ L Sbjct: 431 GIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLPPEFSQMMQINIENGYKTFIDL 489 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ +R+ ++ ++ G +W G +AK GL+D +G ++ + + L K+K W Sbjct: 490 VASARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFDDAVKKVAELA------KLKTW 543 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 + WF D +LS I + ++ M T +Q W P Sbjct: 544 ---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQA----WLP 579 Score = 82.1 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 89/234 (38%), Gaps = 29/234 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHE 105 +++E I D++ T +++SL G + I +A+++ ++ KP+ Sbjct: 97 DIVETIRLAKADNNITGMVLSL----GDFTGADQPSLQYIGKALREFRDSGKPIYAIGES 152 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + + Y ++ +N I + V G Y K L+KL V+ + K+ Sbjct: 153 YSQT-QYYLASFANKIYLSPHGTVALHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVE 211 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE------ 217 P +++P A + + + ++ V+ +R + ++ + G + +G + Sbjct: 212 PMIRDDMSPAAREADTRWIGGLWQNYLTAVAANRQLTPEQLFPGAAG-VVSGLQAAGGSQ 270 Query: 218 ---AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNPPKNYWFCD 262 A L+D + + E+ L D + I D+ P + Sbjct: 271 AQYALSSKLVDQLATRPEMENELVKAFGWDKKNNDFNYVSIYDYQPTPTPQQGE 324 >gi|148251723|ref|YP_001236308.1| S49 family peptidase [Bradyrhizobium sp. BTAi1] gi|146403896|gb|ABQ32402.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Bradyrhizobium sp. BTAi1] Length = 326 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 158/298 (53%), Gaps = 18/298 (6%) Query: 13 VMLSLVTLTVVYFSWSS---HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATAL 69 V++++ L+ + + S S +AR+ I G I E +E +ER+ + SA A+ Sbjct: 26 VLIAIAALSAIGLAMSPRGRTALSTSGSIARVNIEGLIRSDHERVEALERL-ENSSAEAV 84 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 IV ++SPGG+ E ++ ++ ++K +KP++ V +AAS GY+ + A++ IVA ++SLV Sbjct: 85 IVHINSPGGTTAGSEQLYDSLVRLKAKKPLVVVVEGLAASGGYIGAIAADHIVAQQSSLV 144 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGVLFQYP V L +GV ++ VKSSP+KA P+ + +P+A + +V SY WF Sbjct: 145 GSIGVLFQYPNVSELLKTIGVKVEEVKSSPLKAAPNGYEPTSPEARAALDALVKDSYAWF 204 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 LV + R + ++DGR++TG +A ++ LID +G ++ L A + + Sbjct: 205 RGLVKDRRGMDDALLEKVADGRVFTGRQAIELKLIDELGDEKTAVAWLVANKNVKKDLPV 264 Query: 250 KDWNPPKNYWFCDLKNLSISSLL--------------EDTIPLMKQTKVQGLWAVWNP 293 +D+ + + S +L + + + + G+ A+W P Sbjct: 265 RDYKLVPRFGDLTFLRTATSLVLNAVGLSGIAHQIEQAGVVQAVDRLGLDGMLALWTP 322 >gi|126657415|ref|ZP_01728574.1| Peptidase S49, protease IV [Cyanothece sp. CCY0110] gi|126621402|gb|EAZ92114.1| Peptidase S49, protease IV [Cyanothece sp. CCY0110] Length = 597 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 9/243 (3%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 +S +A + + G I D + + +I D+ A+++ ++SPGGSA Sbjct: 305 NSSSNKIAVVYLEGAIVDGIGNREQVGGTRFAKLLRKIGDDEQVKAVVIRINSPGGSATG 364 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I R IQ ++ KPVI + +AAS GY I+ I A ++ GSIGV ++ Sbjct: 365 SDIILREIQLIQETKPVIISMGNVAASGGYWIATGGEHIFAQPNTITGSIGVFGVLLNIQ 424 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ +VK++ + + + + Q V+ Y F+ V++SRN+ + Sbjct: 425 EIANNNGITWDTVKTAKFADLGTATRPKTEQELAIYQKSVNRIYDLFLEKVAQSRNLSKE 484 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 K ++ GR+W+G AKK+GL+D GG + +++++ + + Sbjct: 485 KVASIAQGRVWSGEMAKKIGLVDSFGGLNAAIEYAAKQTELGKDWQVQEYPTSQGFAELF 544 Query: 263 LKN 265 LK Sbjct: 545 LKR 547 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 119/268 (44%), Gaps = 33/268 (12%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ--------------- 51 + T + S+V L + S + V + + QI+D + Sbjct: 20 FLFTTVGVSSIVILLITLASVETEPAIKDKSVLVLDLSTQIQDKEPFVNIRDILSDKDQS 79 Query: 52 -----ELIERIERISRDDSATALIVS---LSSPGGSAYAGE-AIFRAIQKVKNR-KPVIT 101 ++I+ IE+ S+DD A+ + +S GS YA I +A+ K K K +I Sbjct: 80 VLTLSQVIKNIEKASKDDRIKAIFLDGSNANS--GSGYASFAEIRQALIKFKESGKKIIA 137 Query: 102 EVHEMAASAG-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 ++ S Y ++ ++ ++ +V G+ + + LD+ G+ ++ V+ Sbjct: 138 Y--DITVSEQEYYLTSLADTLIVNPMGVVELNGISTEPLFWTGALDRYGIGVQVVRVGEY 195 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAE 217 KA PF ++++ + Q ++ ++ + ++ F++ V E R I + ++D + I T E Sbjct: 196 KAAVEPFIRTQLSEENRQQLEVLLGNIWNNFLQKVGEVRKIEANNLQQIADNQGILTPQE 255 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A+K+ LID V +++ L + ++ Sbjct: 256 AQKLKLIDQVDYRDQAISLLKEITKNKE 283 >gi|33863632|ref|NP_895192.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9313] gi|33635215|emb|CAE21540.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9313] Length = 270 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 134/265 (50%), Gaps = 6/265 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +A I I G I + + +++ I+ + AL++ + SPGG+ + I A+ Sbjct: 8 KSRRRIAHITIDGAISGATRERVLKAIKEVEE-REFPALLLRIDSPGGTVGDSQEIHAAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + V+ ++AS G + A+ IVA ++ GSIGV+ + + L+++G Sbjct: 67 LRLREKGCHVVASFGNVSASGGVYVGVAAEKIVANPGTITGSIGVILRGNNLSKLLERIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP + + Q++Q ++DSSY FV V+E R++ ++ +D Sbjct: 127 IRFETVKSGTYKDILSPDRALTAEERQLLQSLIDSSYEQFVNAVAEGRHLSAEEVRNFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GR+++G +A ++GL+D +G +E + L +D++ + PK L + Sbjct: 187 GRVFSGTQAHELGLVDELGDEEHARKLAAKLADLDEANTQTIKLGRPKKRIAGFLPGSKL 246 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWNP 293 S L + + L Q LW ++ P Sbjct: 247 LSKLAEFLNLELGNNGQVLW-LFLP 270 >gi|312131830|ref|YP_003999170.1| signal peptide peptidase sppa, 67k type [Leadbetterella byssophila DSM 17132] gi|311908376|gb|ADQ18817.1| signal peptide peptidase SppA, 67K type [Leadbetterella byssophila DSM 17132] Length = 581 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 11/248 (4%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +S VA I G+I D ++E I+ I+R +D A+++ ++SPGGSA A Sbjct: 295 STSSDRVAVIVSEGEIVDGNGGEGFIAAEEFIKEIKRARKDKKVKAIVLRINSPGGSAMA 354 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++R IQ K KPV + +AAS GY ++ + IVA T++ GSIG+ + Sbjct: 355 SDKMWREIQLTKKEKPVFASMGNVAASGGYYMAMGCDTIVAHPTTITGSIGIFGVMLNFQ 414 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 F+ DKLGV+ V + PS ++ Q +Q++++ Y F ++ R + Sbjct: 415 KFMNDKLGVTFDEVSTHTYSNSPSSVKKMTEVEKQSIQNMINKGYESFTTKAAQGRKMDL 474 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ L+ GR+WTG +AK+ GL+D++G + L A ++K + PK+ + Sbjct: 475 NELKSLAGGRVWTGEQAKENGLVDILGDLDTAI-ELAAKKAGIKDYQVKYYPYPKSDFDR 533 Query: 262 DLKNLSIS 269 ++ + S Sbjct: 534 LIEKFTKS 541 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 92/247 (37%), Gaps = 12/247 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +EL ++ + D + +S++ P E + A+ K I + + Sbjct: 79 RELQTSLKNAALDPKIKGISISINDPSMGFAELEEVRSALLNFKKSGKFIYTYGDYLSEK 138 Query: 111 GYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 L+ ++ GS+ G+ + Y + L+KLG+ + K+ P+ Sbjct: 139 AILLCAVADSAFIHPE---GSVEFNGLSSEITYFQGTLEKLGIEPIIFRVGEYKSAVEPY 195 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 +++ + + ++ + S H ++ +N L + I+T EA K L+ Sbjct: 196 FRKDMSEASKEQIKSYLGSISHKVYSNFAQDKNWALASVDSLLNKAPIFTSDEALKFDLV 255 Query: 225 DVVGGQEEVWQSLY-ALGVDQ-SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 V ++ ++ LGV + + ++ K + ++ ++ + ++ Sbjct: 256 QAVAYADQYEDAIKNKLGVKKVEYATLSTYSKAKKLIKESTSSDRVAVIVSEG-EIVDGN 314 Query: 283 KVQGLWA 289 +G A Sbjct: 315 GGEGFIA 321 >gi|253565829|ref|ZP_04843283.1| protease IV [Bacteroides sp. 3_2_5] gi|251944933|gb|EES85371.1| protease IV [Bacteroides sp. 3_2_5] gi|301164217|emb|CBW23775.1| putative protease IV [Bacteroides fragilis 638R] Length = 592 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I D ++I + ++ DD A+++ ++SPGGS Sbjct: 303 DKSGNILAVYYASGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISCA++ I+A T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + VN ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 DK +++GR+WTG AKK+GL+D +GG + + A D I + P K Sbjct: 483 SKDKIEKIAEGRVWTGEMAKKIGLVDELGGIGKAL-EIAAQKADLKGYTIISY-PAKKDI 540 Query: 260 FCDLKNLSISSLLEDTI 276 L ++ + +E + Sbjct: 541 LSTLFDVQPGNYVESQV 557 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 34/268 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++ +VTL + S + V + ++G + + Sbjct: 22 LFIIGVVTLVGIISSSDTETVVKKNSVMMLDLKGTLVERTQESLEGLLGKFTGETADTYG 81 Query: 51 -QELIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHE 105 +++ I++ +D+ + + L+ ++YA +AI +A+ K I + Sbjct: 82 LDDILASIKKAKENDNIKGIYIQASWLN----ASYASLQAIRKALDDFKESGKFIVAYSD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ Sbjct: 138 NYTQGLYYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--RIWTGAEAKKV 221 PF +E++P + + + S ++ + VS SR I D + +D + E+ K Sbjct: 198 PFTATEMSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKC 257 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 L D + Q +V L L ++ Sbjct: 258 RLADTLIYQNDVRDYLKTLVKIDEDDRL 285 >gi|323136115|ref|ZP_08071198.1| signal peptide peptidase SppA, 36K type [Methylocystis sp. ATCC 49242] gi|322399206|gb|EFY01725.1| signal peptide peptidase SppA, 36K type [Methylocystis sp. ATCC 49242] Length = 323 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 146/279 (52%), Gaps = 11/279 (3%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 FS + +PH+AR++++G I ++ I+ I++I + A AL++++ SPGG+ E Sbjct: 40 FSDGDSADKLTPHIARLSLQGMITGDRDTIDLIKKIGDSNQARALLLTIESPGGTTTGSE 99 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ +++V +KPV+ V +AAS Y+ + A++ IVA SLVGSIGVLFQ+P Sbjct: 100 KLYEELRRVSEKKPVVAVVGTLAASGAYIAALAADEIVARGNSLVGSIGVLFQFPNFYKL 159 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD GV ++ VKSSP+KA P+ + + A + +V SY WF LV E RN+ ++ Sbjct: 160 LDSWGVKVEEVKSSPLKATPNGYEPTSEAAKAAIASLVSDSYAWFKNLVKERRNLSDEEL 219 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 +SDGR++T + + L+D +GG+ E L ++DW + +L Sbjct: 220 AKVSDGRVFTARQGLPLKLVDKIGGEREAVAWLETNKNIAKDLPVRDWKKKTSLERLNLV 279 Query: 265 NL-----------SISSLLEDTIPLMKQTKVQGLWAVWN 292 S + LE + + GL A+W Sbjct: 280 ESAAKMARAVGFDSFAGALEQVARAERGGSLDGLLAIWQ 318 >gi|330007634|ref|ZP_08305981.1| signal peptide peptidase SppA [Klebsiella sp. MS 92-3] gi|328535428|gb|EGF61902.1| signal peptide peptidase SppA [Klebsiella sp. MS 92-3] Length = 617 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D +A I G I D +E +I D A++ Sbjct: 309 AISYYDYNVKTPSDQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 369 LRVNSPGGSVTASEIIREELAAAKTAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S + P+ Q+MQ +++ Y F Sbjct: 429 GSIGIFGVINTVENTLGSIGVHTDGVATSPLADVSS-TKALPPEVQQLMQLSIENGYQRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R +K ++ G +WTG +AK GL+D +G ++ L ++ + Sbjct: 488 ITLVANARKSTPEKIDQIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKT-WHL 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + ++ S++ D++ + + W P Sbjct: 547 NYYQEEPTFF----------SMVLDSLTGSVRASLPAAIQAWLP 580 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 111/297 (37%), Gaps = 45/297 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS--------- 50 + F+ K ++ ++ ++ +SS +++ A + I G + D Sbjct: 19 LNFIRKLALNAIFLVLVLVCIGIWSQFSSTTSEHAARGALLLDITGVVVDKPSASSKLGV 78 Query: 51 ------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 ++++ I + D + T +++ L + GG + + I +A++ Sbjct: 79 IGRQLFGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLKNFVGGDQPSMQYIGKALR 138 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + ++ KPV V + Y ++ +N I + V G Y K LDKL V Sbjct: 139 EFRDSGKPVYA-VGSSYSQGQYYLASFANKIWLSPQGEVDLHGFATNGLYYKSLLDKLKV 197 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 S + K+ PF +++P A + + + ++ ++ +R I + + Sbjct: 198 STHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTIAANRQITAQQLFPGA 257 Query: 209 DGRI--------WTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 G I T A L+D + EV ++L D + R I ++ Sbjct: 258 QGIIDGLRKVGGDTAKYALDNKLVDELATSTEVEKALTKQFGWSKADNNYRAISYYD 314 >gi|77460384|ref|YP_349891.1| peptidase S49, SppA [Pseudomonas fluorescens Pf0-1] gi|77384387|gb|ABA75900.1| putative peptidase [Pseudomonas fluorescens Pf0-1] Length = 329 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + + L + + A I + G I D + ++ + Sbjct: 43 IFFKLLTFIYLFVALILFTPLMDMEKSATRSGNYTALIDVTGMIADKEPASADNIVGSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D +I+ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 103 AAFEDKKVKGVILRINSPGGSPVQSGYVYDEIKRLRGLHPDTKLYAVISDLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF P+ Sbjct: 163 SAADQIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRTYTSGEHKAFLDPFQPQKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+D+++ F+ V + R + + L G +W+G +A +GLID +G V Sbjct: 223 AFWQSVLDTTHKQFINSVKQGRGDRLKDKEHPELFSGLVWSGEQALPLGLIDGLGNASSV 282 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + +++ D+ ++ + K L S Sbjct: 283 ARDVIG------EKELVDFTVQESPFDRFSKKLGAS 312 >gi|238894259|ref|YP_002918993.1| protease 4 [Klebsiella pneumoniae NTUH-K2044] gi|238546575|dbj|BAH62926.1| protease IV, a signal peptide peptidase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 617 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D +A I G I D +E +I D A++ Sbjct: 309 AISYYDYNVKTPSDQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 369 LRVNSPGGSVTASEIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S + P+ Q+MQ +++ Y F Sbjct: 429 GSIGIFGVINTVENTLGSIGVHTDGVATSPLADVSS-TKALPPEVQQLMQLSIENGYQRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R +K ++ G +WTG +AK GL+D +G ++ L ++ + Sbjct: 488 ITLVANARKSTPEKIDQIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKT-WHL 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + ++ S++ D++ + + W P Sbjct: 547 NYYQEEPTFF----------SMVLDSLTGSVRASLPAAIQAWLP 580 Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 111/297 (37%), Gaps = 45/297 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS--------- 50 + F+ K ++ ++ ++ +SS +++ A + I G + D Sbjct: 19 LNFIRKLALNAIFLVLVLVCIGIWSQFSSTTSEHAVRGALLLDITGVVVDKPSASSKLGV 78 Query: 51 ------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 ++++ I + D + T +++ L + GG + + I +A++ Sbjct: 79 IGRQLFGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLKNFVGGDQPSMQYIGKALR 138 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + ++ KPV V + Y ++ +N I + V G Y K LDKL V Sbjct: 139 EFRDSGKPVYA-VGSSYSQGQYYLASFANKIWLSPQGEVDLHGFATNGLYYKSLLDKLKV 197 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 S + K+ PF +++P A + + + ++ ++ +R I + + Sbjct: 198 STHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTIAANRQITAQQLFPGA 257 Query: 209 DGRI--------WTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 G I T A L+D + EV ++L D + R I ++ Sbjct: 258 QGIIDGLRKVGGDTAKYALDNKLVDELATSTEVEKALTKQFGWSKADNNYRAISYYD 314 >gi|295706883|ref|YP_003599958.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium DSM 319] gi|294804542|gb|ADF41608.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium DSM 319] Length = 336 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 74/270 (27%), Positives = 137/270 (50%), Gaps = 22/270 (8%) Query: 35 SPHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSPGGS 79 + +A + + G I+D+ Q ++++E D + +I+ ++SPGG Sbjct: 58 AKKIAVLEVNGTIQDTGSGSSPLMSQNGYNHQAFLKQLEAAKNDKAVKGVIIKVNSPGGG 117 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I + I+++K +KPV + MAAS GY IS A+N I A +L GS+GV+ Q Sbjct: 118 VVESAEIHKKIEELKKDTKKPVYISMGSMAASGGYYISTAANKIYAIPDTLTGSLGVIMQ 177 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 DKLGV +KS K SP E+ + ++MQ +VD+SY FV ++SE R Sbjct: 178 SVNYGKLADKLGVESVVIKSGAHKDIMSPTREMTGEEKEIMQTLVDNSYDGFVNVISEGR 237 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ +K ++DGR++ G +AK++ L+D +G E+ + + D ++ + + Sbjct: 238 HLSKEKVRSIADGRVYDGRQAKELKLVDQLGYFEDAVK---GMEKDYKLKGAQVIQYNQG 294 Query: 258 YWFCDLKNLSISSLL--EDTIPLMKQTKVQ 285 + ++S+ ++ ++ + M +T Q Sbjct: 295 FGLPSWLSMSMQKVIGGDEQVTAMLKTFAQ 324 >gi|262043079|ref|ZP_06016219.1| signal peptide peptidase SppA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039567|gb|EEW40698.1| signal peptide peptidase SppA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 617 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D +A I G I D +E +I D A++ Sbjct: 309 AISYYDYNVKTPSDQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 369 LRVNSPGGSVTASEIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S + P+ Q+MQ +++ Y F Sbjct: 429 GSIGIFGVINTVENTLGSIGVHTDGVATSPLADVSS-TKALPPEVQQLMQLSIENGYQRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R +K ++ G +WTG +AK GL+D +G ++ L ++ + Sbjct: 488 ITLVANARKSTPEKIDQIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKT-WHL 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + ++ S++ D++ + + W P Sbjct: 547 NYYQEEPTFF----------SMVLDSLTGSVRASLPAAIQAWLP 580 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 111/297 (37%), Gaps = 45/297 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS--------- 50 + F+ K ++ ++ ++ +SS +++ A + I G + D Sbjct: 19 LNFIRKLALNAIFLVLVLVCIGIWSQFSSTTSEHAARGALLLDITGVVVDKPSASSKLGV 78 Query: 51 ------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 ++++ I + D + T +++ L + GG + + I +A++ Sbjct: 79 IGRQLFGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLKNFVGGDQPSMQYIGKALR 138 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + ++ KPV V + Y ++ +N I + V G Y K LDKL V Sbjct: 139 EFRDSGKPVYA-VGSSYSQGQYYLASFANKIWLSPQGEVDLHGFATNGLYYKSLLDKLKV 197 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 S + K+ PF +++P A + + + ++ ++ +R I + + Sbjct: 198 STHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTIAANRQITAQQLFPGA 257 Query: 209 DGRI--------WTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 G I T A L+D + EV ++L D + R I ++ Sbjct: 258 QGIIDGLRKVGGDTAKYALDNKLVDELATSTEVEKALTKQFGWSKADNNYRAISYYD 314 >gi|172037525|ref|YP_001804026.1| protease IV, 67K long form [Cyanothece sp. ATCC 51142] gi|171698979|gb|ACB51960.1| protease IV, 67K long form [Cyanothece sp. ATCC 51142] Length = 597 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 14/260 (5%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++ +A + + G I D + + +I ++ A+++ ++SPGGSA A Sbjct: 305 SSSNNKIAVVYLEGAIVDGVGNREQVGATRFARILRKIRDNEQVKAVVIRINSPGGSATA 364 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I R IQ ++ KPVI + +AAS GY I+ I A ++ GSIGV ++ Sbjct: 365 SDIILREIQLIQETKPVIISMGNVAASGGYWIATGGEHIFAQPNTITGSIGVFGVLFNIQ 424 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ VK+ + + + + Q V+ Y F+ V++SR++ + Sbjct: 425 EIANNNGITWDVVKTGKFADLGTATRPKTEQELAIYQKSVNRVYDLFLEKVAKSRDLSKE 484 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 K + ++ GR+W+G AKK+GL+D GG +++++ + + Sbjct: 485 KVVNIAQGRVWSGETAKKIGLVDSFGGLGAAIDYAVEKTELGKDWQVEEYPTSQGF---- 540 Query: 263 LKNLSISSLLEDTIPLMKQT 282 L I L++ I + T Sbjct: 541 -AELFIKKTLDEDIKITTNT 559 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 116/242 (47%), Gaps = 25/242 (10%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--------LIERIERISRDDSATALIVS 72 +V+ F S+ ++D P + I G I +E +I+ IE+ S+DD A+ + Sbjct: 50 SVLVFDLSTEIKDREP---LVNI-GDILSGKESSVLTLSQVIKNIEKASKDDRIKAIFLD 105 Query: 73 ---LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAG-YLISCASNIIVAAETS 127 SS G A I +A+ + K K +I ++ S Y ++ ++ ++ Sbjct: 106 GSNASSGSGYANFS-EIRQALIEFKESGKKIIAY--DVTISEQEYYLTSLADTLIVNPMG 162 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSS 185 L+ G+ + ++ L+K G+ ++ V+ K+ P++ ++P+ Q ++ ++ + Sbjct: 163 LMEFNGIGTEPLFLTGALNKYGIGVQVVRVGEYKSGVEPYTRTQLSPENRQQLEVLLGNI 222 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 ++ F++ V ++R I + ++D G ++ EAK++ L+D V +++ L + + Sbjct: 223 WNNFLQDVGKTRQIKVNNLQSIADTQGLLYP-QEAKELNLVDQVDYRDKAISILKEITDN 281 Query: 244 QS 245 + Sbjct: 282 KE 283 >gi|123442511|ref|YP_001006488.1| protease 4 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089472|emb|CAL12320.1| protease IV [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 616 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 26/283 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + +A + G I D L +I + D A+I+ + Sbjct: 311 IYDYQPTPTPQQGEQIAVLFANGAIMDGPQTPGNVGGDVLAAQIRQARLDPKIKAVILRV 370 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L GSI Sbjct: 371 NSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSI 430 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + L+ +GV V +SP+ A S ++ P+ QMMQ +++ Y F+ L Sbjct: 431 GIFGVINTFQNTLESIGVHTDGVATSPL-ANVSVTKDLPPEFSQMMQINIENGYKTFIDL 489 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ +R+ ++ ++ G +W G +AK GL+D +G ++ + + L K+K W Sbjct: 490 VATARHKTPEQVDQIAQGHVWIGIDAKNNGLVDQLGDFDDAVKKVAELA------KLKTW 543 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 + WF D +LS I + ++ M T +Q W P Sbjct: 544 ---QLNWFVDEPSLSDLIFGQMSASVQAMLPTAIQA----WLP 579 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 91/230 (39%), Gaps = 21/230 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++E I D++ T L++SLS G+ + I +A+++ ++ KP+ + + Sbjct: 97 DIVETIRLAKADNNITGLVLSLSDFTGADQPSLQYIGKALREFRDSGKPIYAIGESYSQT 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 157 -QYYLASFANKIYLSPQGTVALHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPMIR 215 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ V+ +R + ++ + G + +G + A Sbjct: 216 DDMSPAAREADTRWIGGLWQNYLTAVAANRQLTPEQLFPGAAG-VVSGLQAAGGSQAQYA 274 Query: 219 KKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNPPKNYWFCD 262 L+D + + E+ L D + I D+ P + Sbjct: 275 LSSKLVDQLATRPEMENELVKAFGWDKKNNDFNYVSIYDYQPTPTPQQGE 324 >gi|57239342|ref|YP_180478.1| putative protease IV [Ehrlichia ruminantium str. Welgevonden] gi|58579308|ref|YP_197520.1| putative protease IV [Ehrlichia ruminantium str. Welgevonden] gi|57161421|emb|CAH58345.1| putative peptidase [Ehrlichia ruminantium str. Welgevonden] gi|58417934|emb|CAI27138.1| Putative Protease IV [Ehrlichia ruminantium str. Welgevonden] Length = 289 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 149/231 (64%), Gaps = 1/231 (0%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 + + V L L+ V S S+ DN ++A++ I G+IE ++E+ + +++I++D Sbjct: 20 RTLTFLVVFLMLILSNYVDTSSVSNFLDNE-YIAKVNIEGKIETNEEMDKLLKKIAKDTH 78 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 LI++++SPGG+ E +++ I+ V KPV+ +++ AAS GY+ + A++ I+A Sbjct: 79 IKGLILNINSPGGAVTGSEILYQNIRNVSKYKPVVALLNDFAASGGYMTAIAADYIIARH 138 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIGVL QY V KLG+++KS+KSS +KA SPF E+ + Q ++ +++ S Sbjct: 139 TTITGSIGVLMQYFGVDQLAKKLGITLKSIKSSQLKAATSPFEELTQEKEQSVRHIINDS 198 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Y++FV +V+E R + ++ L ++DG I+TG+EA +GL+D +GG++E + Sbjct: 199 YNYFVDIVAERRKMTKEQVLAIADGSIYTGSEALAIGLVDQIGGEDEALKW 249 >gi|167032494|ref|YP_001667725.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida GB-1] gi|166858982|gb|ABY97389.1| signal peptide peptidase SppA, 36K type [Pseudomonas putida GB-1] Length = 329 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 10/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L ++ H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILVLFTPLMDMDKAASRSASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 103 DAFKDSKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVISDLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPEKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q V+D++++ F+ +V + R + + L G +W+G +AK +GL+D +G V Sbjct: 223 RFWQGVLDTTHNQFIAMVKQGRGERLKDKEHPELFSGLVWSGEQAKALGLVDGLGSASYV 282 Query: 234 WQSLYA 239 + + Sbjct: 283 AREIVG 288 >gi|152969758|ref|YP_001334867.1| protease 4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954607|gb|ABR76637.1| protease IV, a signal peptide peptidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 617 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D +A I G I D +E +I D A++ Sbjct: 309 AISYYDYNVKTPSDQGSAIAVIFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAIV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 369 LRVNSPGGSVTASEIIREELAAAKAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S + P+ Q+MQ +++ Y F Sbjct: 429 GSIGIFGVINTVENTLGSIGVHTDGVATSPLADVSS-TKALPPEVQQLMQLSIENGYQRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R +K ++ G +WTG +AK GL+D +G ++ L ++ + Sbjct: 488 ITLVANARKSTPEKIDQIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKT-WHL 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + ++ S++ D++ + + W P Sbjct: 547 NYYQEEPTFF----------SMVLDSLTGSVRASLPAAIQAWLP 580 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 111/297 (37%), Gaps = 45/297 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS--------- 50 + F+ K ++ ++ ++ +SS +++ A + I G + D Sbjct: 19 LNFIRKLALNAIFLVLVLVCIGIWSQFSSTTSEHAARGALLLDITGVVVDKPSASSKLGV 78 Query: 51 ------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 ++++ I + D + T +++ L + GG + + I +A++ Sbjct: 79 IGRQLFGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLKNFVGGDQPSMQYIGKALR 138 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + ++ KPV V + Y ++ +N I + V G Y K LDKL V Sbjct: 139 EFRDSGKPVYA-VGSSYSQGQYYLASFANKIWLSPQGEVDLHGFATNGLYYKSLLDKLKV 197 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 S + K+ PF +++P A + + + ++ ++ +R I + + Sbjct: 198 STHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTIAANRQITAQQLFPGA 257 Query: 209 DGRI--------WTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 G I T A L+D + EV ++L D + R I ++ Sbjct: 258 LGIIDGLRKVGGDTAKYALDNKLVDELATSTEVEKALTKQFGWSKADNNYRAISYYD 314 >gi|116327402|ref|YP_797122.1| periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331960|ref|YP_801678.1| periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120146|gb|ABJ78189.1| Periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125649|gb|ABJ76920.1| Periplasmic serine protease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 317 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 143/283 (50%), Gaps = 17/283 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVV-------YFSWSSHVEDNSPHVARIAIRGQI--------- 47 + + T V++ LV +++ + + A I + G+I Sbjct: 10 ITFILTTLSVLIGLVNISLSTTTSKYSRVTGGTFFRTAPIGAALIKVEGEIHSGHSTFES 69 Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 S+ +++++ I ++ + +++ ++SPGG+ A + ++ + +++ + ++ + +MA Sbjct: 70 TGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMA 129 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY I+ +++ I A ++ GSIGV+ P +K LD+ GV +++ K K S F Sbjct: 130 ASGGYYIASSADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEGKYKDSLSLF 189 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P+ +M+Q ++ +Y+ FV+ V++ RN L++GRI++G +A + L+D + Sbjct: 190 RDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGRIYSGQDAFRNKLVDEI 249 Query: 228 GGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GG++E + L L D I ++ P + F L + S Sbjct: 250 GGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNS 292 >gi|22299347|ref|NP_682594.1| protease [Thermosynechococcus elongatus BP-1] gi|22295530|dbj|BAC09356.1| protease [Thermosynechococcus elongatus BP-1] Length = 274 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 137/265 (51%), Gaps = 10/265 (3%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +AR+ I G I S + +++ ++ I AL+V + SPGG+ + I+ A+++++ Sbjct: 12 QIARLEITGAIAGSTRRRVLKALKTIEE-RGYPALLVRIDSPGGTVGDSQEIYAALKRLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 ++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 SKMKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVILRGNNLQRLLDKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K + ++ + ++++QD++D+SY FV+ V+E RN+ + +DGR++T Sbjct: 131 IKSGPYKDILAFDRDLTEEEIRILQDLIDTSYQQFVQTVAEGRNLDVETVRSFADGRVFT 190 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 G +A +GL+D +G +E+ + L L G+D K++ PK+ Sbjct: 191 GEQALALGLVDRLGTEEDARRWLAELAGLDPDKTKVQTIEEPKSPLARLFPRQQERFPFP 250 Query: 274 DT-----IPLMKQTKVQGLWAVWNP 293 + T LW ++ P Sbjct: 251 WQAGLDWLEFEMATNGLPLW-LYRP 274 >gi|71737114|ref|YP_273878.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557667|gb|AAZ36878.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325305|gb|EFW81372.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. B076] gi|320327710|gb|EFW83718.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. race 4] Length = 332 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTRGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|229496545|ref|ZP_04390259.1| signal peptide peptidase SppA, 67K type [Porphyromonas endodontalis ATCC 35406] gi|229316442|gb|EEN82361.1| signal peptide peptidase SppA, 67K type [Porphyromonas endodontalis ATCC 35406] Length = 554 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 14/282 (4%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-------SQELIERIERISRDDSATAL 69 VTL VY S + V + G+I ++ L+ R+ + + DD A+ Sbjct: 256 FVTLNRVYNSERRYDNSGDGTVQVLFAEGEITSGVEFGTITEALVGRLLKAADDDDIDAV 315 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++ ++SPGGS+Y + I+ A++ K++KP++ + + AAS GY ISCASN I A T++ Sbjct: 316 VLRVNSPGGSSYVSDQIWDAVRYTKSKKPIVVSMGDYAASGGYYISCASNYIFAEPTTIT 375 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ +P K V+ VK++ + F + + +MQ ++ Y F Sbjct: 376 GSIGIFGLFPNFAGTAQKFSVTEDGVKTAKYADFGNVFRPMTDEERALMQAYIERGYDTF 435 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD------ 243 + V+E R + + +++ GR+WTG +A L+D +GG +E L Sbjct: 436 LSRVAEGRKLEKSQVDLVAQGRVWTGKQALARHLVDELGGLDEAIAKAAELANINTPSVW 495 Query: 244 -QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +S R+ K N Y F L + L E+ I +K+ ++ Sbjct: 496 YESSRQDKFSNLVDRYLFEGSDKLVRNILTEEEIEALKKARI 537 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 82/214 (38%), Gaps = 7/214 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 E I I + + + ++ + P + + + RA++ K + + + G Sbjct: 56 EAIRSIRYAAENPRIEGIYLTSAMPEAGLASIDELRRALKDFKKSGKFVISYADQYSQKG 115 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ ++ I V G+ + K L+K GV+++ K K PF + Sbjct: 116 YYLASVADEIYLNPQGAVELDGMYVSNVFYKNALEKFGVTMQVFKVGTYKGAVEPFLLDK 175 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEA-KKVGLIDVV 227 ++ + ++ ++ +S+ RNI D L D ++ + L+D + Sbjct: 176 LSEPNRAQITSFTSELWNNMLQGISQERNIALDSLSRLVDRAPMFLSQQELVASKLVDKL 235 Query: 228 GGQEEVWQ---SLYALGVDQSIRKIKDWNPPKNY 258 + EV + Y + D + + +N + Y Sbjct: 236 CYEREVIKMFEDEYGIKEDHFVTLNRVYNSERRY 269 >gi|238751644|ref|ZP_04613134.1| Protease 4 [Yersinia rohdei ATCC 43380] gi|238710206|gb|EEQ02434.1| Protease 4 [Yersinia rohdei ATCC 43380] Length = 616 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 309 ISIYDYQPTPAPQQGEQIAVLFANGAIMDGPQTPGNVGGDALAAQIRQARLDPKIKAVIL 368 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L G Sbjct: 369 RVNSPGGSVSASELIRSELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTG 428 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L+ +GV V +SP+ A + ++ P+ QMMQ +++ Y F+ Sbjct: 429 SIGIFGVINTFQNSLESIGVHTDGVATSPL-ANVTVTKDLPPEFSQMMQINIENGYKTFI 487 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ +R+ ++ ++ G +W G +AK GL+D +G ++ + + L K+K Sbjct: 488 DLVATARHKTPEQVDQIAQGHVWIGLDAKNNGLVDQLGDFDDAVKKVAELA------KLK 541 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 542 TW---QLNWFVDEPSLSDLIFGQMSASVQAMLPAAIQA----WLP 579 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 21/222 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++E + D + T +++SLS G+ + I +A+++ ++ KP+ S Sbjct: 97 DIVETLRLAKSDSNITGVVLSLSDFTGADQPSLQYIGKALREFRDTGKPIYAIGDSYNQS 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 157 -QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPMIR 215 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ VS +R + ++ + G + +G + A Sbjct: 216 DDMSPAAREADSRWIGGLWQNYLTAVSANRQLTPEQLFPGAAG-VISGLQAAGGSPAQYA 274 Query: 219 KKVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNP 254 L+D + + EV L D + I D+ P Sbjct: 275 LNSKLVDQLASRPEVETDLVKTFGWDKKNNDFNYISIYDYQP 316 >gi|15607042|ref|NP_214424.1| proteinase IV [Aquifex aeolicus VF5] gi|2984291|gb|AAC07815.1| proteinase IV [Aquifex aeolicus VF5] Length = 283 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 +A + + G I + L+ +IER+ + AL++ + SPGGS A + I+RAI++ K+ Sbjct: 33 RIAVLKLSGVIVNPYPLVNKIERLKDSKNVVALVLRVDSPGGSVGASQEIYRAIERFKSA 92 Query: 97 -KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 KPV+ + +AAS GY +S A N I A E ++ GSIGV+ Q+ K ++KLG+ ++ Sbjct: 93 GKPVVISMGNVAASGGYYVSAAGNYIFANEGTITGSIGVIIQHVAYKKLVEKLGIEATAI 152 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYDKTLVLSDGRIW 213 K+ K SPF E+ + + +Q++V+ + F++ + + R I +K ++DGRI+ Sbjct: 153 KTGKFKDTLSPFRELTQEEKEYLQNLVNEALEQFIQAILKYRSNKISEEKLREIADGRIF 212 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 TG +A ++GL+D +G + + L + + + Sbjct: 213 TGRQALELGLVDELGSLYDAIEKAKELSGYRDAKPV 248 >gi|268589452|ref|ZP_06123673.1| signal peptide peptidase SppA [Providencia rettgeri DSM 1131] gi|291315117|gb|EFE55570.1| signal peptide peptidase SppA [Providencia rettgeri DSM 1131] Length = 618 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 18/282 (6%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + + +S+ + D S ++A I ++G I D + +I DD+ A Sbjct: 311 ISIYDYSTKIADTNANQSGNIAVIVVQGAIMDGPQTAGIAGGDTIAAQIRDARLDDNIKA 370 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGGS A + I + KPV+ + MAAS GY +S ++ I+A+ + Sbjct: 371 IVLRVNSPGGSVSASDLIRSELASAHAAGKPVVVSMGGMAASGGYWVSTPADYIIASPNT 430 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + LD +GV V +SP+ S ++P+ MMQ +++ Y Sbjct: 431 LTGSIGIFGVINTFEKSLDSIGVYTDGVSTSPLADI-SLTKGISPQFADMMQITIENGYE 489 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LV++SR+ + ++ GR+W G +A K GL+D +G + L ++ Sbjct: 490 TFIGLVAKSRHKTPAEIDQIAQGRVWIGQDALKNGLVDQLGDFDNAVDKAAELAKLTDVK 549 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 DW P+ F D L +++ ++ +P + + A Sbjct: 550 L--DWMKPE-LTFMDQLLLELTTNVQAAMPDVLHVFLPPAVA 588 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 101/281 (35%), Gaps = 50/281 (17%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------- 50 EFV I V+ +V ++ + + E N + ++G I D Sbjct: 24 EFVFNAIF--LVLFFVVIGSIALYQTETQPEKNYFGALYVDLQGVIVDQVSTPDPFGRMS 81 Query: 51 ----------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRA 89 ++++ I + DD T +++ L + I +A Sbjct: 82 RELLGTSNSRMQENSLFDIVDTIRTAANDDRITGMVLRLD----DLAGADQPSLAYIGKA 137 Query: 90 IQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + K+ K V + S Y ++ ++ I VG G Y K L+KL Sbjct: 138 INEFKSSGKQVYAIGNSYNQS-QYYLASYADEIYLTPQGAVGVYGFATNGLYYKSLLEKL 196 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 VS + K+ P E++P+A + +D+ ++ ++ ++++RN + Sbjct: 197 KVSSHIFRVGTYKSAVEPLMRDEMSPEARLANKQWLDALWNNYLTEIAKNRNTTSTQIFP 256 Query: 207 LSDGRIW--------TGAEAKKVGLIDVVGGQEEVWQSLYA 239 +D + + A K L+D + E+V L Sbjct: 257 GADAILEKLRSVKGDSAQYALKQKLVDKLYTNEQVEDLLSK 297 >gi|183599305|ref|ZP_02960798.1| hypothetical protein PROSTU_02769 [Providencia stuartii ATCC 25827] gi|188021539|gb|EDU59579.1| hypothetical protein PROSTU_02769 [Providencia stuartii ATCC 25827] Length = 622 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 14/272 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGG 78 S + ++A I ++G I D + + +I +++ A+I+ ++SPGG Sbjct: 325 GSETSATAGNIAVIIVQGAIMDGPQSPGIASGDLISSQIREARLNENIKAIILRVNSPGG 384 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S A + I + + KPV+ + MAAS GY +S +N IVA+ ++ GSIG+ Sbjct: 385 SVTASDLIRNELASARAAGKPVVVSMGGMAASGGYWVSTPANYIVASPNTITGSIGIFGV 444 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + LD +GV V ++P+ S ++P+ MMQ +++ Y F+ LV++SR Sbjct: 445 INTFENALDSVGVYTDGVSTTPLADI-SATKGISPEFSDMMQITIENGYKTFIGLVAKSR 503 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 N ++ ++ GR+W G++AKK+GL+D +G ++ L + DW P+ Sbjct: 504 NKTPEEIDKIAQGRVWIGSDAKKIGLVDQLGDFDDAVTKAAELAKLNDVSL--DWMQPEL 561 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 F D L +SS + +P + Q + A Sbjct: 562 S-FMDQLILELSSTAQAVMPDILQVFLPEAVA 592 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 81/205 (39%), Gaps = 25/205 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHE 105 ++++ I + DD T +++ L + + + I +AI + K KP+ Sbjct: 99 DIVDTIRSAATDDRITGMVLRLD----NLVSADQPSLNFIGKAITEFKESGKPIYAVGDS 154 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + S Y ++ ++ I + +VG G Y K L+KL VS + K+ Sbjct: 155 FSQS-QYYLASYADHIFLSPQGMVGIQGFSTNTLYYKSLLEKLKVSSHIFRVGTYKSAVE 213 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----------GRIW 213 P ++P+A Q + +D+ ++ ++ ++++R +D G Sbjct: 214 PLMRDNMSPEARQATKQWLDALWNNYLDTLAKNRQTTAKGIFPGADVLLSKLRASGGD-- 271 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLY 238 A L+D + +E+ L Sbjct: 272 NAKYALNQKLVDKIYTREQAENVLK 296 >gi|325269104|ref|ZP_08135724.1| signal peptide peptidase SppA [Prevotella multiformis DSM 16608] gi|324988491|gb|EGC20454.1| signal peptide peptidase SppA [Prevotella multiformis DSM 16608] Length = 592 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 15/253 (5%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISRD 63 VT+ + + ++D +A G I D +Q++ + +E ++ D Sbjct: 286 VTVADLQNAEDETLDDGDSQIAVYYAYGDIVDGAVGGMFAQNHKIDAQKVCKDLEELAED 345 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 A+++ ++S GGSAYA E I+ I ++K +KPV+ + MAAS Y +S ++ IVA Sbjct: 346 KEIKAVVLRVNSGGGSAYASEQIWHQIMELKKKKPVVVSMGGMAASGAYYMSAPADWIVA 405 Query: 124 AETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T+L GSIG+ +P +KLGV VK++ + + + V Sbjct: 406 EPTTLTGSIGIFGMFPDASSLFAEKLGVRFDEVKTNKYAGFGTQARPFTEDEMAYLTQYV 465 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + Y F V+E R + + ++ G ++TG +A+K+GL+D +GG + L Sbjct: 466 NRGYRLFRHRVAEGRKMTDSQVEKIAQGHVYTGQDAQKIGLVDQLGGLDTAIAKAVRLAK 525 Query: 243 DQSIRKIKDWNPP 255 P Sbjct: 526 LTGYSTCVYPEEP 538 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 100/278 (35%), Gaps = 39/278 (14%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------- 50 +L I + L + + + +EDNS V + + GQ+ + Sbjct: 16 LLFGIVAGFFALITIAGMIAMQDSTEKIEDNS--VLVLNLSGQLAERGEDNFFGQLQGNA 73 Query: 51 ------QELIERIERISRDDSATALIVSL-----SSPGGSAYAG-EAIFRAIQKVKNRKP 98 L+E I + +++ + + S YA +A+ A+ K Sbjct: 74 TSSIGLDNLLEGIHKAKDNNNVKGIYIEAGAFAADS-----YASMQALRNALLDFKKSGK 128 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 I + Y ++ A++ + + G+ Q +VK L K+GV ++ VK Sbjct: 129 WIVAYGDTYTQGTYYLASAADKVYLNPQGQIDWHGLSSQPVFVKDLLAKVGVKMQVVKVG 188 Query: 159 PMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG- 215 K+ F+ ++ + ++S + + V SR + + +D I Sbjct: 189 AYKSATEMFTGDRMSAANREQTSAYLNSIWGNITKEVGASRRLSTAQLNAYADSMITFAA 248 Query: 216 -AEAKKVGLIDVVGGQEE---VWQSLYALGVDQSIRKI 249 K+ L+D + ++ + + L D +I ++ Sbjct: 249 PETYVKLKLVDGLVYTDQMKGIVKKRLGLKSDDAIEQV 286 >gi|60682742|ref|YP_212886.1| putative protease IV [Bacteroides fragilis NCTC 9343] gi|60494176|emb|CAH08968.1| putative protease IV [Bacteroides fragilis NCTC 9343] Length = 592 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I D ++I + ++ DD A+++ ++SPGGS Sbjct: 303 DKSGNILAVYYASGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISCA++ I+A T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + VN ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 DK +++GR+WTG AKK+GL+D +GG + + A D I + P K Sbjct: 483 SKDKIEKIAEGRVWTGEMAKKIGLVDELGGIGKAL-EIAAQKADLKGYTIISY-PAKKDI 540 Query: 260 FCDLKNLSISSLLEDTI 276 L ++ + +E + Sbjct: 541 LSTLLDVQPGNYVESQV 557 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 102/268 (38%), Gaps = 34/268 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++ +VTL + S + V + ++G + + Sbjct: 22 LFIIGVVTLVGIISSSDTETVVKKNSVMMLDLKGTLVERTQESLEGLLGKFTGETADTYG 81 Query: 51 -QELIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHE 105 +++ I++ DD+ + + L ++YA +AI +A+ K + + Sbjct: 82 LDDILASIKKAKEDDNIKGIYIQASWLD----ASYASLQAIRKALDDFKESGKFVVAYSD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ Sbjct: 138 NYTQGLYYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--RIWTGAEAKKV 221 PF +E++P + + + S ++ + VS SR I D + +D + E+ K Sbjct: 198 PFTATEMSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKC 257 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL D + Q +V L L ++ Sbjct: 258 GLADTLIYQNDVRDYLKTLVKIDEDDRL 285 >gi|220910108|ref|YP_002485419.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7425] gi|219866719|gb|ACL47058.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7425] Length = 270 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 134/268 (50%), Gaps = 7/268 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERIS---RDDSATALIVSLSSPGGSAYAGEAIF 87 + +ARI + G I + +R+ + + AL++ + SPGG+ + I+ Sbjct: 5 FKPARKQIARIEVTGVIAAATR--KRLLQAFKTIEEKGFPALLLRIDSPGGTVGDSQEIY 62 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK Sbjct: 63 TALKRLREKVKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDK 122 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GVS K++KS P K + E+ ++Q+++D+SY FV+ V+E R + + Sbjct: 123 IGVSFKTIKSGPYKDILAFDRELTEPEKHILQELIDTSYGQFVQTVAEGRKLAEETVRSF 182 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNL 266 +DGR++TG +A +GL+D +G +EE + L G+D + K +W + Sbjct: 183 ADGRVFTGQQALALGLVDRLGTEEEARRWAAELVGLDPEKTRCFTIEERKPFWNKFVPGN 242 Query: 267 SISSLLEDTIPLMKQTKVQGL-WAVWNP 293 S ++L L + GL ++ P Sbjct: 243 SQTTLGAGLSWLEFELSTSGLPLWLYRP 270 >gi|124022325|ref|YP_001016632.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9303] gi|123962611|gb|ABM77367.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9303] Length = 270 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 136/265 (51%), Gaps = 6/265 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +A I+I G I + + +++ I+ + AL++ + SPGG+ + I A+ Sbjct: 8 KSRRRIAHISIDGAISGATRERVLKAIKEVEE-REFPALLLRIDSPGGTVGDSQEIHAAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + V+ ++AS G + A+ IVA ++ GSIGV+ + + L+++G Sbjct: 67 LRLREKGCHVVASFGNVSASGGVYVGVAAEKIVANPGTITGSIGVILRGNNLSKLLERIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP + + Q++Q ++DSSY FV V+E R++ ++ +D Sbjct: 127 IRFETVKSGTYKDILSPDRALTAEERQLLQSLIDSSYEQFVNAVAEGRHLSAEEVRNFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GR+++GA+A ++GLID +G +E + L +D++ + PK L + Sbjct: 187 GRVFSGAQAHELGLIDELGDEEHARKLAAKLADLDEANTQTLKLGRPKKRLAGFLPGSKL 246 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWNP 293 S L + + L Q LW ++ P Sbjct: 247 LSKLAELLNLELGNSGQVLW-LFLP 270 >gi|94266545|ref|ZP_01290231.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] gi|93452820|gb|EAT03346.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] Length = 306 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 128/251 (50%), Gaps = 4/251 (1%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 V L +L +F SH E + + ++G I + +L+ ++ R D+ A Sbjct: 27 FWAAVSYLLGSLAGGFFDSKSHREG----IGVVEVKGVITSADQLLAQLAEFGRRDNIKA 82 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +I+ + SPGG+ A + +F +++V +KPV+ + +AAS G + + IVA +L Sbjct: 83 IILRIDSPGGAVGASQELFAEVKRVNQQKPVVAAMGSVAASGGLYAALGAERIVANPGTL 142 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+ ++ ++ +++G +++KS +K +P + P+ QM+Q++VD + Sbjct: 143 TGSIGVIIKFANLEELFERIGYRSETIKSVDLKDSGAPDRPLAPEERQMLQEMVDDVHDQ 202 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F+ V+ R++ DGRI++G +A ++GL+D +G + LG R Sbjct: 203 FIADVAADRDLSTTTVRAFGDGRIFSGNQALELGLVDQLGNFNDAAMLAAELGGLDPSRV 262 Query: 249 IKDWNPPKNYW 259 + PP+ + Sbjct: 263 PELIYPPRRDF 273 >gi|325275823|ref|ZP_08141688.1| signal peptide peptidase SppA, 36K type [Pseudomonas sp. TJI-51] gi|324099042|gb|EGB97023.1| signal peptide peptidase SppA, 36K type [Pseudomonas sp. TJI-51] Length = 329 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 10/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + ++ L + H A + +RG I D + +++ + Sbjct: 43 IFFKLLTFVYLFGILALFSPLMDMDKAASRGASHTALVEVRGVIADQEAASADNIVKSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D A+++ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 103 EAFKDSKTKAVVMRINSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PFS P+ Sbjct: 163 SAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPEKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q V+D++++ F+ +V + R + + L G +W+G +AK +GL+D +G V Sbjct: 223 RFWQGVLDTTHNQFIAMVKQGRGERLKDKEHPELFSGLVWSGEQAKALGLVDGLGSASYV 282 Query: 234 WQSLYA 239 + + Sbjct: 283 AREIVG 288 >gi|255011818|ref|ZP_05283944.1| putative protease IV [Bacteroides fragilis 3_1_12] gi|313149656|ref|ZP_07811849.1| protease IV [Bacteroides fragilis 3_1_12] gi|313138423|gb|EFR55783.1| protease IV [Bacteroides fragilis 3_1_12] Length = 592 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I D ++I + ++ DD A+++ ++SPGGS Sbjct: 303 DKSGNILAVYYASGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISCA++ I+A T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + VN ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 DK +++GR+WTG AKK+GL+D +GG + + A D I + P K Sbjct: 483 SKDKIEKIAEGRVWTGEMAKKIGLVDELGGIGKAL-EIAAQKADLKGYTIISY-PAKKDI 540 Query: 260 FCDLKNLSISSLLEDTI 276 L ++ + +E + Sbjct: 541 LSTLLDVQPGNYVESQV 557 Score = 85.2 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 101/268 (37%), Gaps = 34/268 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++ +VTL + S V + ++G + + Sbjct: 22 LFIIGVVTLVGIISSSDIETVVKKNSVMMLDLKGTLVERTQESLEGLLGKFTGETADTYG 81 Query: 51 -QELIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHE 105 +++ I++ +D+ + + L ++YA +AI +A+ K + + Sbjct: 82 LDDILASIKKAKENDNIKGIYIQASWLD----ASYASLQAIRKALDDFKESGKFVVAYSD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ Sbjct: 138 NYTQGLYYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--RIWTGAEAKKV 221 PF +E++P + + + S ++ + VS SR I D + +D + E+ K Sbjct: 198 PFTATEMSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKC 257 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL D + Q +V L L ++ Sbjct: 258 GLADTLIYQNDVRDYLKTLVKIDEDDRL 285 >gi|209695598|ref|YP_002263527.1| protease IV (endopeptidase IV) [Aliivibrio salmonicida LFI1238] gi|208009550|emb|CAQ79842.1| protease IV (endopeptidase IV) [Aliivibrio salmonicida LFI1238] Length = 617 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 135/282 (47%), Gaps = 20/282 (7%) Query: 22 VVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + Y+ + V + + +A + G I D + + DD+ A Sbjct: 308 ISYYDYLPQVHPSIIPDAKDIAVVVASGAIMDGTQRQGTVGGDSTAALLRQARDDDNVKA 367 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I + ++ KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 368 VVLRVDSPGGSAFASEIIRNEVDALQEAGKPVVISMSSVAASGGYWISASADKIIAQPTT 427 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+K+G+ + +SP ++ Q+MQ ++ Y+ Sbjct: 428 ITGSIGIFGILTTFEKGLEKMGIHSDGISTSPFNGIG-LTRPLDKDVAQVMQLGIEHGYY 486 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQS 245 F++LVS+ R++ D ++ GR+WTG +A + GLID +G ++ Q+ L + Sbjct: 487 RFIKLVSDHRDMSLDAVDNVAQGRVWTGKDALEHGLIDQLGDFDDAVQAAAELANMDAYN 546 Query: 246 IRKIKDWNPPKNYWFCDL---KNLSISSLLEDTIPLMKQTKV 284 + +K+ P + +L N+S+ + L P Q + Sbjct: 547 LFWVKEPLTPMEQFLEELSMSLNVSVKAELFSLAPEALQPAI 588 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 100/281 (35%), Gaps = 50/281 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNS--PHVARIAIRGQIEDSQ------- 51 + F + + + + + + + S +D + + + G I + Sbjct: 19 LSFTRQLVLNLFFLAFIGVIAFTFLSTDDIQQDQTVEKKALILDLSGPIVEESKFREPLE 78 Query: 52 ------------------ELIERIERISRDDSATALIVSL----SSPGGSAYAGEAIFRA 89 ++++ I ++DD+ + L++ L + S I +A Sbjct: 79 RVTADLLGSQRSQENVLFDIVDTIRYAAKDDNVSGLVLHLKEMNET---SLTKLRYIAKA 135 Query: 90 IQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I K KPV S Y ++ ++ I A V G Y K L+KL Sbjct: 136 INTFKASGKPVYAIGDYYNQS-QYYLASYADKIFMAPDGAVLLRGYGAYTLYYKDLLEKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-------NI 199 VS + K+ P+ ++++ A + + ++ VS +R + Sbjct: 195 NVSTHVFRVGTYKSAVEPYLRNDMSDAAKASTSAWLTQLWDAYLGDVSTNRQIDAKTLTM 254 Query: 200 PYDK-TLVLS--DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 P D+ L+ +G ++GL+D + ++EV + L Sbjct: 255 PMDQFIAKLTALNGD--LSQMTVELGLVDKLATRQEVRKDL 293 >gi|290968387|ref|ZP_06559927.1| signal peptide peptidase SppA, 36K type [Megasphaera genomosp. type_1 str. 28L] gi|290781574|gb|EFD94162.1| signal peptide peptidase SppA, 36K type [Megasphaera genomosp. type_1 str. 28L] Length = 315 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 24/279 (8%) Query: 13 VMLSLVTLTVVYFSW------SSHVEDNSPHVARIAIRGQIEDSQ-------------EL 53 V L ++ + + +W +A I + G I L Sbjct: 12 VTLLVICVITIMAAWLHVREPYDGSGKRGKKIALITVSGPITGGDGQGFWNTGGATAPSL 71 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGY 112 +++I + + D A+++ + SPGGSA A + I R +Q+ K+ PV+ + + AAS GY Sbjct: 72 MKQIRQATADAEVGAILLRIDSPGGSAAATQEIARELQRAKDNHIPVVVSMGDTAASGGY 131 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ + + A +++ GSIGV Y + KLG+ + +KS K SPF + Sbjct: 132 WLAVYGDTLFADPSTITGSIGVYMSYYDARGLSRKLGIREEKIKSGAHKDIFSPFRPMTA 191 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + QM QD+V+ Y+ FV +V++ R++ + L+DGR++TG+ AK +GL+D +G + Sbjct: 192 EEKQMTQDMVNEMYNQFVTVVAKERHMRPETVRALADGRVYTGSRAKALGLVDRLGNYYD 251 Query: 233 VWQSLYAL----GVDQSIRKIKDWNPPKNYWFCDLKNLS 267 L D+ + P W NLS Sbjct: 252 ALAYTKKLVHTDADDEDCLVTYEDGQPWQDWVKGNLNLS 290 >gi|86356057|ref|YP_467949.1| proteinase IV protein [Rhizobium etli CFN 42] gi|86280159|gb|ABC89222.1| proteinase IV protein [Rhizobium etli CFN 42] Length = 316 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 183/296 (61%), Gaps = 13/296 (4%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R V ++L+ L ++ ++ SPH+A + I G I D EL+ER++++ + Sbjct: 18 FWRIVAVALIVALGFAFYRFALGEAGTASPHIAHVTISGLIVDDDELLERLKKVETSNQV 77 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A ++S+SSPGG+ Y GE IF AI+ + +KPV+++V +AASAGY+I+ A + I+A ++ Sbjct: 78 KAAVISISSPGGTTYGGEKIFNAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDS 137 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 138 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSY 197 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV LV+E R +P ++ L L+DG I+TG +A + L+D +GG+ E+ L + GVD + Sbjct: 198 NWFVDLVAERRKLPREEVLKLADGTIYTGRQALQAKLVDTIGGEAEIRAYLQSRGVDADL 257 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK----------VQGLWAVWN 292 + DW+ N F +S + L++ + GL +VW Sbjct: 258 PMV-DWDKKSNTPFLLAGAVSRLVTILGYDDLIRGQDINGILPPKLLLDGLLSVWQ 312 >gi|149376748|ref|ZP_01894506.1| putative peptidase [Marinobacter algicola DG893] gi|149358987|gb|EDM47453.1| putative peptidase [Marinobacter algicola DG893] Length = 346 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 14/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K+ T + +L+ + S + H A + I G I + ++ + Sbjct: 62 IFFKLLTFGYLFALLLMIQFPLSGALESAAKGKHTALVEIEGTIAADELASADNIVGSLR 121 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 +++ +I+ ++SPGGS ++ I +++ K V + ++ AS Y I+ Sbjct: 122 EAFEAENSVGVILRINSPGGSPVQSGYVYDEIVRLRGEYPEKKVYAVISDIGASGAYYIA 181 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV+ +DKLGV + + KA PFS + V Sbjct: 182 AAADEIYADKASLVGSIGVVAGGFGFTGIMDKLGVDRRLYTAGENKAFLDPFSPEEEEEV 241 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + QDV+++++ F+ V + R L G +W+G +A ++GLID +G V + Sbjct: 242 KFWQDVLETTHSQFIESVRKGRGDRLADDEQLFSGLVWSGEQALELGLIDGLGSSSHVAR 301 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + D++ ++ + + +S Sbjct: 302 QVIG------QEDLVDYSRRESPFQNIVDQFGVS 329 >gi|332288260|ref|YP_004419112.1| putative protease [Gallibacterium anatis UMN179] gi|330431156|gb|AEC16215.1| putative protease [Gallibacterium anatis UMN179] Length = 619 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 17/267 (6%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 S ++A + + G I D + + + + + + + A+++ ++SPGGS Sbjct: 316 ETANATSNNIAVLRVEGTIIDGESDDENVGGDTIARLLRQAAENTAVKAVVLRINSPGGS 375 Query: 80 AYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I ++ ++ KPV+ + MAAS GY I+ ++ I+A + ++ GSIG+ + Sbjct: 376 AFASEVIREEVEHLQQIGKPVVVSMGGMAASGGYWIASTADYIIADKNTITGSIGIFAAF 435 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ L LG+ VK+SP+ A SPF+ ++ + ++Q ++ Y F+ LV++ R Sbjct: 436 VTLEKSLANLGIHSDGVKTSPL-ASMSPFTALSQEYSDVIQMSIEHGYDQFISLVAKGRK 494 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL------YALGVDQSIRKIKDW 252 + + ++ GR+W G +A K L+D +G G+ Sbjct: 495 LDKSQVDKIAQGRVWLGEDALKYKLVDELGDFNTAIAVASEKIREKEKGLTDDQIGFLWL 554 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLM 279 + ++ L SS+L+D + + Sbjct: 555 SEDQSKGLLSLLGQKKSSMLQDLLRSI 581 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 113/321 (35%), Gaps = 45/321 (14%) Query: 1 MEFVLK-KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQE------ 52 + F+ + + ++ ++ + L + P A R+ + G + D+++ Sbjct: 13 LNFLRRVLMNLAFLFVAGILLFSSTLFVEEQRKQPVPQGALRLNLDGFLADNRDQNSGLK 72 Query: 53 -------------------LIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAIQK 92 ++ I + +D+ +++ L+ GG + I +A+ + Sbjct: 73 ALLNNVQKQVISEKISVFDVVFAITQAKKDERIKGIVLDLNYFEGGDLPSITFIGKALNE 132 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K KPVI + Y+++ ++ I V G+ + Y K LDK+ Sbjct: 133 FKQSGKPVIAVSDNYSQK-QYILASYADKIYLHRQGQVELTGLGGEQFYYKSLLDKIDAQ 191 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + K+ P +++ A Q +++ ++ VS +R++ ++ ++ Sbjct: 192 PHIFRVGTYKSAVEPLLRDDMSEAARQNASQWLNAMWNNIKTTVSNNRHLKQEQIFPSTN 251 Query: 210 ----------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 G A L+ V + ++ +L + NY Sbjct: 252 DFLQQVKNLKGD--LTQYALTNKLVTEVATRYQISAALKQQFGADRENNTYQYIDFSNYL 309 Query: 260 FCDLKNLSISSLLEDTIPLMK 280 + L + ++ + I +++ Sbjct: 310 YS-LPDYETANATSNNIAVLR 329 >gi|53714736|ref|YP_100728.1| protease IV [Bacteroides fragilis YCH46] gi|52217601|dbj|BAD50194.1| protease IV [Bacteroides fragilis YCH46] Length = 592 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I D ++I + ++ DD A+++ ++SPGGS Sbjct: 303 DKSGNILAVYYASGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISCA++ I+A T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + VN ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 DK +++GR+WTG AKK+GL+D +GG + + A D I + P K Sbjct: 483 SKDKIEKIAEGRVWTGEMAKKIGLVDELGGIGKAL-EIAAQKADLKGYSIISY-PAKKDI 540 Query: 260 FCDLKNLSISSLLEDTI 276 L ++ + +E + Sbjct: 541 LSTLLDVQPGNYVESQV 557 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 34/268 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++ +VTL + S + V + ++G + + Sbjct: 22 LFIIGVVTLVGIISSSDTETVVKKNSVMMLDLKGTLVERTQESLEGLLGKFTGETADTYG 81 Query: 51 -QELIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHE 105 +++ I++ +D+ + + L ++YA +AI +A+ K + + Sbjct: 82 LDDILASIKKAKVNDNIKGIYIQASWLD----ASYASLQAIRKALDDFKESGKFVVAYSD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ Sbjct: 138 NYTQGLYYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--RIWTGAEAKKV 221 PF +E++P + + + S ++ + VS SR I D + +D + E+ K Sbjct: 198 PFTATEMSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKC 257 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL D + Q +V L L ++ Sbjct: 258 GLADTLIYQNDVRDYLKTLVKIDEDDRL 285 >gi|258645667|ref|ZP_05733136.1| signal peptide peptidase SppA [Dialister invisus DSM 15470] gi|260403034|gb|EEW96581.1| signal peptide peptidase SppA [Dialister invisus DSM 15470] Length = 315 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 27/305 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW------SSHVEDNSPHVARIAIRGQI------------ 47 K K VML+++ ++ + +S + +VA I I G I Sbjct: 4 KIKKWIMVMLAVLVISAAAAGFMPEWKKTSAIGKGKDYVAEIRIDGTIYGGPRNGTLLGA 63 Query: 48 ---EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 S++++ +E+ +D+ +++ ++SPGGS A + I + K+KN KP++ + Sbjct: 64 SEGVSSEQVMYEMEQARKDNRVKGVLLRINSPGGSTGATQEIAEEMDKIKNAGKPIVVSM 123 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +M ASAGY ++ + + A +L GSIGV Y V+ +DKLGV + +KS K Sbjct: 124 GDMCASAGYWLASKGDYVFANPATLTGSIGVYMDYTNVEELMDKLGVKNEKIKSGAHKDI 183 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + + +M+Q +VD Y FV+ V++ R + + ++DGRI TG +A ++GL Sbjct: 184 LSMYRPMTGDEQKMLQTMVDDIYSQFVKTVADGRRMEESRVRSVADGRILTGQQAMELGL 243 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 +D +G + + + D P K Y ++ ++ + + + Sbjct: 244 VDAMGNYYDALNYAGGVAGIEG-----DSVPVKRYSVGTSWKNILAGEMDSAVRSLAKNI 298 Query: 284 VQGLW 288 +W Sbjct: 299 SDNIW 303 >gi|304312941|ref|YP_003812539.1| Peptidase S49 [gamma proteobacterium HdN1] gi|301798674|emb|CBL46906.1| Peptidase S49 [gamma proteobacterium HdN1] Length = 335 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 130/273 (47%), Gaps = 14/273 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 K + Y ++L +V + S + +S HV + + G I D+ ++ + ++R Sbjct: 51 FKLLMFVYFFVALAMFSVNWDSGEDSMGASSDHVGVVDLDGMIMAGGDNDADQISKGLQR 110 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 + ++ A+++ ++SPGGS I+R I++++ + K + + ++ AS Y ++ Sbjct: 111 AFKAQNSKAVLLRINSPGGSPVQSATIYREIKRLRAKYPSKKLYAVITDVGASGAYYVAA 170 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A +SLVGSIGV+ + ++KLG+ + + S KA PFS + P Sbjct: 171 AADEIYADPSSLVGSIGVISEGFGFVGGMEKLGIERRLITSGKNKAFLDPFSPLAPAHKA 230 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +V++ + F+ V + R + + G +W+G +A +GLID G V + Sbjct: 231 YFSEVLNVVHQQFINAVKDGRGDRLKDSPDMFSGLVWSGEQALPLGLIDGYGSPGSVVRD 290 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + L +K D+ + + ++ S Sbjct: 291 VIHL------KKTVDYTAKTSPFESFARSFGAS 317 >gi|238763177|ref|ZP_04624143.1| Protease 4 [Yersinia kristensenii ATCC 33638] gi|238698676|gb|EEP91427.1| Protease 4 [Yersinia kristensenii ATCC 33638] Length = 624 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 26/283 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y + +A + G I D L +I + D A+I+ + Sbjct: 319 IYDYQPTPTPQQGEQIAVLFANGAIMDGPQTPGNVGGDALAAQIRQARLDPKIKAVILRV 378 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + ++ KP++ + MAAS GY IS +N I+A ++L GSI Sbjct: 379 NSPGGSVSASELIRTELAALRAANKPLVVSMGGMAASGGYWISTPANYIIANPSTLTGSI 438 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + L+ +GV V +SP+ S ++ P+ QMMQ +++ Y F+ L Sbjct: 439 GIFGVINTFQNTLESIGVHTDGVATSPLANI-SVTKDLPPEFSQMMQINIENGYKTFIDL 497 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ +R+ ++ ++ G +W G +AK GL+D +G ++ + + L ++K W Sbjct: 498 VATARHKTPEQVDQIAQGHVWIGMDAKNNGLVDQLGDFDDAVKKVAELA------QLKTW 551 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 + WF D +LS I + ++ M +Q W P Sbjct: 552 ---QLNWFVDEPSLSDLIFGQMSASVQAMLPAAIQA----WLP 587 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 101/288 (35%), Gaps = 48/288 (16%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + S + + + G + D +L Sbjct: 47 VGIYFQFQSKPTEPVKGALLVNLSGVVVDQPAVNNKLRQLGRELLGASSNRLQENSLFDL 106 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAASAG 111 +E I D++ T L++SLS G+ + I +A+++ ++ KP+ + Sbjct: 107 VETIRLAKADNNITGLVLSLSDFTGADQPSLQYIGKALREFRDTGKPIYAIGDSYNQT-Q 165 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ +N I + V G Y K L+KL V+ + K+ P + Sbjct: 166 YYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPMIRDD 225 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------AKK 220 ++P A + + + ++ VS +R + ++ + G + +G + A Sbjct: 226 MSPAAREADSRWIGGLWQNYLTTVSANRQLTPEQLFPGAAG-VISGLQAAGGSPAQYALA 284 Query: 221 VGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNPPKNYWFCD 262 L+D + + +V L D + I D+ P + Sbjct: 285 SKLVDQLATRPDVENELVKAFGWDKKSNDFNYVSIYDYQPTPTPQQGE 332 >gi|294501535|ref|YP_003565235.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium QM B1551] gi|294351472|gb|ADE71801.1| signal peptide peptidase SppA, 36K type [Bacillus megaterium QM B1551] Length = 336 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 137/273 (50%), Gaps = 22/273 (8%) Query: 32 EDNSPHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSP 76 + + +A + + G I+D+ Q ++++E D + +I+ ++SP Sbjct: 55 GNAAKKIAVLEVNGTIQDTGSGSSPLMSQNGYNHQAFLKQLEAAKNDKAVKGVIIKVNSP 114 Query: 77 GGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG I + I+++K +KPV + MAAS GY IS A+N I A +L GS+GV Sbjct: 115 GGGVVESAEIHKKIEELKKETKKPVYISMGSMAASGGYYISTAANKIYAIPDTLTGSLGV 174 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + Q DKLGV +KS K SP E+ + ++MQ +VD+SY FV ++S Sbjct: 175 IMQSVNYGKLADKLGVESVVIKSGAHKDIMSPTREMTGEEKEIMQTLVDNSYDGFVNVIS 234 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R++ +K ++DGR++ G +AK++ L+D +G E+ + D ++ + Sbjct: 235 EGRHLSKEKVRSIADGRVYDGRQAKELKLVDQLGYFEDAV---TGMEKDYKLKGAQVIQY 291 Query: 255 PKNYWFCDLKNLSISSLL--EDTIPLMKQTKVQ 285 + + ++S+ ++ ++ + M +T Q Sbjct: 292 NQGFGLPSWLSMSMQKVIGGDEQVTAMLKTFAQ 324 >gi|330900160|gb|EGH31579.1| peptidase S49, SppA [Pseudomonas syringae pv. japonica str. M301072PT] Length = 332 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 21/293 (7%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + ++ ++++ V + S + A I ++G I D ++ ++ +++ Sbjct: 50 FKLLTFAFLFVAVI---VPMLDFEGGTSRRSSYTALIDVQGVIADKEAASAENIVTALQK 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 107 AFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Q Sbjct: 167 AADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q V+D+++ F+ V + R + + L G IWTG +A +GL+D +G V Sbjct: 227 FWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLIWTGEQAVALGLVDGLGSASYVA 286 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 287 RDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 331 >gi|213969775|ref|ZP_03397910.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato T1] gi|301382851|ref|ZP_07231269.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato Max13] gi|302062843|ref|ZP_07254384.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato K40] gi|302131351|ref|ZP_07257341.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925583|gb|EEB59143.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato T1] Length = 332 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T V V + + + S H A I ++G I D ++ + + Sbjct: 48 IFFKLLT--VAFLFVAIVLPMLDFEGGASRRSSHTALIDVQGVIADKESASAENITTALR 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 DAFGDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + G +WTG +A +GL+D +G V Sbjct: 226 QFWQSVLDTTHRQFIASVKQGRGDRLKDKDHPEMFSGLVWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 AREVI------KEKDIVEYTVEESPFDRFSKKLGAS--IAERIAMLVGFGGPSL 331 >gi|170740731|ref|YP_001769386.1| signal peptide peptidase SppA, 36K type [Methylobacterium sp. 4-46] gi|168195005|gb|ACA16952.1| signal peptide peptidase SppA, 36K type [Methylobacterium sp. 4-46] Length = 321 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 161/288 (55%), Gaps = 8/288 (2%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +++++ + + +P +ARI + G I S + + ++R+ + + +IVS Sbjct: 29 LIVAVGAIGLRAAGSRGPFPAITPQIARITVDGFIAGSDKTRDLMKRVGDSSAVSGVIVS 88 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG+ E +FR ++++ +KPV+ V AAS Y+ + A++ IVA ETSLVGSI Sbjct: 89 INSPGGTTTGSEELFRNLRQLAEKKPVVAFVDGTAASGAYITALAADHIVARETSLVGSI 148 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVLFQYP + LDK+GV ++ VKSSP+KAEPS F +P+A +Q +V +Y WF L Sbjct: 149 GVLFQYPDLSGLLDKVGVRVEEVKSSPLKAEPSGFHPTSPEARAALQAIVGDTYAWFKNL 208 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R + + +SDGR+++G + + L+D G +++ L I+DW Sbjct: 209 VAERRRMSEAELAAVSDGRVFSGRQGVALKLVDETGNEKQAVAWLERERHVTKDLPIRDW 268 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ-------GLWAVWNP 293 P + F DL + + LED +++T + GL AVW P Sbjct: 269 KPRSDRSF-DLLSAASLLGLEDVAAGLRRTSGEAAALAQGGLLAVWRP 315 >gi|260220733|emb|CBA28590.1| hypothetical protein Csp_A07920 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 345 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 13/269 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISR 62 I+ ++ V + + + + ++PH A ++I G+I E ++ + Sbjct: 67 IRLAWLGFLCVVVWLGMQQSGTPSDISTPHTAVVSIHGEIASGNEASAEVVVASVRAAFE 126 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNI 120 D A A+++ ++SPGGS I I ++K +KPV V E ASA Y I+ A++ Sbjct: 127 DQGAKAVVLLINSPGGSPVQAGIINDEIHRLKALHKKPVYAVVEETCASAAYYIAVAADE 186 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I + S+VGSIGVL ++KLGV + + + K PFS K Q Sbjct: 187 IYVDKASIVGSIGVLMDGFGFTGLMEKLGVERRLLTAGENKGFLDPFSPQTDKQRVFAQA 246 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++D + F+ +V E R +T + G WTG +A +GL D +G + V + + Sbjct: 247 MLDQIHQQFIGVVKEGRGKRLKETPDMFSGLFWTGQQAIDLGLADKLGNIDFVAREVV-- 304 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 +I D+ +N +K S Sbjct: 305 ----KAEEIVDYTRKENVAERLVKRFGAS 329 >gi|289624530|ref|ZP_06457484.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649341|ref|ZP_06480684.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. aesculi str. 2250] gi|330869275|gb|EGH03984.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 332 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLYPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G IWTG +A +GL+D +G V Sbjct: 226 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 ARDVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFSGPSL 331 >gi|220905589|ref|YP_002480901.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869888|gb|ACL50223.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 383 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 136/281 (48%), Gaps = 1/281 (0%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 + +++ L L VV S +A +++ G I + + +E + ++R+ S Sbjct: 84 LFWAAIVIVLGALGVVAGSAGKDGGLMGGDRIALVSVTGPIMNVEPTLEWLRTVARNPSV 143 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 ++V + SPGG A A + ++ A++ + + PV + MAAS G ++S A + A + Sbjct: 144 KGVLVRVDSPGGGAAASQEVYDALKNLAQKMPVAVSMGSMAASGGLMVSMAGQRVFANPS 203 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P ++ +DK+GV +++ K S + + Q V+ + Y Sbjct: 204 TVTGSIGVRMDVPQLQGLMDKVGVGQETLVVGQYKDAASYMRPMTAEQRAYFQGVLTNMY 263 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV +V++ R +P D+ L L++G+++TG EA +GL+D +GG+ + L + Sbjct: 264 DQFVDIVAQGRGMPRDRALKLANGKVYTGQEALGLGLVDELGGRGQALAWLAQKTGVPAE 323 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 RK+ L+ + + L ++ L + GL Sbjct: 324 RKLLTRPREDGLLGRGLRVMLGAVLGPESDTLGGLASLAGL 364 >gi|238757018|ref|ZP_04618206.1| Protease 4 [Yersinia aldovae ATCC 35236] gi|238704848|gb|EEP97377.1| Protease 4 [Yersinia aldovae ATCC 35236] Length = 616 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 22/270 (8%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 V +A I G I D L +I + D A+++ ++SPGGS Sbjct: 319 VPQQGGQIAVIFANGAIIDGPQTPGNVGGDTLAAQIRQARLDPKIKAVVLRVNSPGGSVS 378 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L GSIG+ Sbjct: 379 ASELIRSELTALRAANKPLVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINT 438 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + L+ +GV V +SP+ S + P+ QMMQ +++ Y F+ LV+ SR+ Sbjct: 439 FQNTLESIGVHTDGVATSPLADI-SITKNLPPEFAQMMQINIENGYKTFIDLVATSRHKT 497 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ ++ G +W G +AK GL+D +G ++ + + L ++K W + WF Sbjct: 498 PEQVDQIAQGHVWIGVDAKSNGLVDQLGDFDDAVKKVAELA------QLKTW---QLNWF 548 Query: 261 CDLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 D +LS I + +I + + +Q + Sbjct: 549 IDEPSLSDMILGQMNVSIQAILPSAIQAML 578 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 90/222 (40%), Gaps = 21/222 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I D++ T L++SLS G+ + + +A+++ ++ KP+ + Sbjct: 97 DIVDTIRLAKNDNNITGLVLSLSDFTGADQPSLQYMGKALREFRDSGKPIYAIGDSYNQT 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 157 -QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLQVTTNIFRVGTYKSAVEPMIR 215 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + +H ++ V+ +R + ++ + G + +G + A Sbjct: 216 DDMSPAAREADSRWIGGLWHNYLTAVAANRQLTPEQLFPGAAG-VISGLQAAGGSPAQYA 274 Query: 219 KKVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNP 254 L+D + + +V L D + I D+ P Sbjct: 275 LTSKLVDQLASRPDVETELVKTFGWDKKSNDFNYVSIYDYQP 316 >gi|88607225|ref|YP_504886.1| signal peptide peptidase SppA, 36K type [Anaplasma phagocytophilum HZ] gi|88598288|gb|ABD43758.1| signal peptide peptidase SppA, 36K type [Anaplasma phagocytophilum HZ] Length = 298 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 149/271 (54%), Gaps = 9/271 (3%) Query: 10 TRYVMLSLVTLTVVY--------FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 R + ++ L VV+ FS++ +VARI I G I +++ + R+ Sbjct: 18 WRALFFVVLGLLVVFASQVDYSRFSFADIAGGAGGYVARIGIEGTIGRNKDRTALLSRVE 77 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D S A+++ + SPGG+ E ++R I+ + +KPV+ + +AAS GY+ + A++ + Sbjct: 78 DDSSIKAVVLRIDSPGGTVGDSEELYRQIRAIAEKKPVVAVMGNVAASGGYMTALAADHV 137 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A ++ GSIGVL QY V ++LG+++K++K+S +KA SP E++ + +M ++ Sbjct: 138 IANNGTITGSIGVLTQYVGVARIAERLGITLKTIKTSELKASMSPLEEMSKNSEDVMHEL 197 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-L 240 + +H+FV +V+E R + ++ ++DGR++TGA+A +V L+D +GG+ E + L + Sbjct: 198 IKDFHHFFVSMVAERRGLSEEEAYKVADGRVYTGAQALQVKLVDELGGEREALEWLKSHH 257 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 +D ++D + + S Sbjct: 258 NIDTEKVVVRDLEYQSRLSLMGGLRMLLESF 288 >gi|256424808|ref|YP_003125461.1| signal peptide peptidase SppA, 67K type [Chitinophaga pinensis DSM 2588] gi|256039716|gb|ACU63260.1| signal peptide peptidase SppA, 67K type [Chitinophaga pinensis DSM 2588] Length = 587 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 12/265 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGSAY 81 + VA I G I I+ I +D A++ ++SPGGSA Sbjct: 298 KGADNKVAIIYAEGNIVGGDSEKDVTISSGHFIKLIREARQDKDVKAIVFRVNSPGGSAL 357 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A E+I+R + K KPV+ + + AAS GY ISC ++ I A +L GSIGV P + Sbjct: 358 ASESIWRELVLAKKSKPVVVSMGDYAASGGYYISCMADSIFAQPNTLTGSIGVFAVLPNL 417 Query: 142 KPFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + F KLGV+ VK++ + + + +Q+ VDS Y F V E R + Sbjct: 418 QGFFKNKLGVTFDGVKTAQYADLGNTSRPLTDIEKKFIQNSVDSIYSTFKSRVVEGRKLS 477 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ GR+W+G +AK++GL+D +GG E L S R ++++ Sbjct: 478 GAVVDSIAQGRVWSGIQAKQLGLVDRIGGINEAIACAAKLAKVSSYR-LREYPESDASLS 536 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQ 285 +K+ S+ +E + + Sbjct: 537 RMMKSFGASAHVEAAVKNELGEQYD 561 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 9/195 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPVITEVHEMA 107 ++I I+ DD + + G+A E + A+ + K + E+ Sbjct: 79 NDMIRLIKHAETDDDIKGIYLKAE---GNANGFATNEEVRNALLRFKQSGKFVFAYGEVM 135 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ ++ + V G Q ++K L+KL + + K+ P Sbjct: 136 DQKSYYMASLADRVYVHPKGGVEFSGFFTQLTFLKGTLEKLEIQPQIFYDGRFKSATEPL 195 Query: 168 SEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAEAKKVGLI 224 E +Q + Y F++ + +R I + +G I A+A K L+ Sbjct: 196 RETEMTLANRIQTSAYLGDLYGNFLKNIGTARKIDTASLHRYANEGLIQEAADALKYKLV 255 Query: 225 DVVGGQEEVWQSLYA 239 D + ++V + + Sbjct: 256 DGLKYNDQVMDEIKS 270 >gi|190890072|ref|YP_001976614.1| proteinase IV protein [Rhizobium etli CIAT 652] gi|190695351|gb|ACE89436.1| proteinase IV protein [Rhizobium etli CIAT 652] Length = 316 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 116/296 (39%), Positives = 185/296 (62%), Gaps = 13/296 (4%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D Sbjct: 18 FWRIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQV 77 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A ++S+SSPGG+ + GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++ Sbjct: 78 KAAVISISSPGGTTFGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDS 137 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 138 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSY 197 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV LV++ R +P D+ L L+DG I+TG +A K+ LID +GG+ E+ L + GVD + Sbjct: 198 NWFVDLVADRRKLPRDEVLKLADGTIYTGRQALKMKLIDTIGGEPEIRAYLKSRGVDTDL 257 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK----------VQGLWAVWN 292 + DW+ N F +S + L+K + GL +VW Sbjct: 258 -PMVDWDKKSNTPFLLAGAVSRLITIFGYDDLVKGQDINGILPPKLLLDGLLSVWQ 312 >gi|146306653|ref|YP_001187118.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina ymp] gi|145574854|gb|ABP84386.1| signal peptide peptidase SppA, 36K type [Pseudomonas mendocina ymp] Length = 326 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 19/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + + L + H A I IRG I D + +++ + Sbjct: 41 IFFKLLTFLYLFGALALFLPALDLKKGA-STGAHTALIEIRGMIADQEQASADKVVGSLR 99 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D + +I+ ++SPGGS I+ I++++ P V + ++ AS Y I+ Sbjct: 100 AAFEDANTKGVILRINSPGGSPVQSGYIYDEIRRLRGEHPQIKVYAVITDLGASGAYYIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV + S KA PF + Sbjct: 160 SAADEIYADKASLVGSIGVTAASFGFVETMEKLGVERRVYTSGEHKAFLDPFQPQKEEET 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + V+D+++ F+ V + R + D L G +W+G +A ++GL+D +G V Sbjct: 220 RFWKGVLDTTHRQFIESVKQGRGDRLKADAHPELFSGLVWSGEQALQLGLVDALGSASYV 279 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + +++ D+ + K L S + D I L + L Sbjct: 280 AREVIG------EKEMVDFTVRDTPFDRFAKRLGTS--VADRIALWMGFQGPTL 325 >gi|325104824|ref|YP_004274478.1| signal peptide peptidase SppA, 67K type [Pedobacter saltans DSM 12145] gi|324973672|gb|ADY52656.1| signal peptide peptidase SppA, 67K type [Pedobacter saltans DSM 12145] Length = 586 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 11/246 (4%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +S +A I G+I S+ + I + DD A+++ ++SPGGS+ A Sbjct: 300 NTSSNRIAVIYANGEINSGEGDQNTIGSEGISRAIRKARLDDKVKAIVLRVNSPGGSSLA 359 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I+R K KP I + + AAS GY ISCA++ I A ++ GSIGV P +K Sbjct: 360 SDVIWRETVLAKKEKPFIVSMGDYAASGGYYISCAADSIFAEPNTITGSIGVFAILPNLK 419 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 PFL +KLG++ VK+ + +++Q V+ Y F + V+E R I Sbjct: 420 PFLNNKLGITFDGVKTGEFADFGQVTRPLTSAEKELLQQEVNKIYFDFTKRVAEGRKISQ 479 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + GR+WTG +A +GL+D +G E+ +S + R I + K Sbjct: 480 SYVDSIGQGRVWTGKQAIDLGLVDKIGHIEDAIKSAAKKAKIEDYR-IMSYPEKKEGLLS 538 Query: 262 DLKNLS 267 L Sbjct: 539 ILDKSG 544 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 101/275 (36%), Gaps = 34/275 (12%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIR-----------------GQ 46 + I + +S++T ++ S +S VE + I + G Sbjct: 15 IFLSIVLFIIFISIITAGLIN-SSNSKVEIKDNSILHINLNYPILERANPNPLEDLEIGP 73 Query: 47 IE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRK 97 I+ ++++ I DD + + S AG E I + K Sbjct: 74 IKKEKTLGLNDILKSIRYAKEDDQIKGIYLDAS----MVQAGMATVEEIRDELLNFKKSG 129 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + E+ Y ++ A++ + + G+ + K L+KL + + +K Sbjct: 130 KFVIAYSEVYTQKSYYLASAASKVYLNPVGYLELKGLSSNTMFFKGALNKLEIEPQVIKV 189 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWT 214 K+ PF +++ M +++S + F ++ R + D + +++ ++ T Sbjct: 190 GTFKSAVEPFILDKMSDANKLQMSSILNSIFEDFTGKIAIERKLAKDSVVSIANLLKVRT 249 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 +A K L+D + ++EV L + + + Sbjct: 250 AEDALKYKLVDALKYKDEVLDELKSKTGIDKKKNL 284 >gi|71065346|ref|YP_264073.1| signal peptide peptidase [Psychrobacter arcticus 273-4] gi|71038331|gb|AAZ18639.1| probable signal peptide peptidase [Psychrobacter arcticus 273-4] Length = 351 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 137/297 (46%), Gaps = 22/297 (7%) Query: 5 LKKIKTRYVMLSLVTL----TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIE 55 K + Y++L +T+ + + ++ N PH+A + I+G I ++ + Sbjct: 57 FKLLTFGYILLIFLTIGRSCSTEAPTALDGIDTNKPHLAVVEIQGTISSGDVANAYDVND 116 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGY 112 + R + ++ A+ + ++SPGGS + I++ + ++ + K + + +M AS Y Sbjct: 117 ALTRAFENSNSKAVALDINSPGGSPVQSDEIWQTMMDLRKQYPDKKLYAVIGDMGASGAY 176 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I +SLVGSIGV+ VK +DK+GV +++ + K S + Sbjct: 177 YIASAADEIYVNPSSLVGSIGVIMPSYNVKGLMDKVGVEDRTITAGEYKDILSLSRPLTD 236 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 Q ++ V+D+++ F+ V E R + L G WTG ++ ++GL D G Sbjct: 237 YEEQHVEKVLDNTHKHFINAVKEGRGDRLKNPEQNKLFSGLFWTGEQSIELGLADKKGSI 296 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNY-WFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + + L + + ++ P + F D + + + + +I L + +G Sbjct: 297 SSLEKQL-------KLNNVVNYTPSDPFQLFMDRFAVKLGAGVGSSINLDLLPQEEG 346 >gi|117924863|ref|YP_865480.1| signal peptide peptidase SppA, 36K type [Magnetococcus sp. MC-1] gi|117608619|gb|ABK44074.1| signal peptide peptidase SppA, 36K type [Magnetococcus sp. MC-1] Length = 350 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 136/278 (48%), Gaps = 19/278 (6%) Query: 6 KKIKTRYVMLSLVTLTVVY----FSWSSHVEDNSPHVARIAIRGQIE-----DSQELIER 56 K + +++L LV + F S + PHVA + + G I D+ E+I+ Sbjct: 63 KNLFRLFIVLYLVATMALLNRGDFEEGSSASASEPHVAVVKMVGAIMPESDLDADEVIKN 122 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYL 113 ++ +D++ A+++ ++SPGGS I+ I +++ V + ++ AS GY Sbjct: 123 LQEAFKDENTKAVVLRINSPGGSPVQAGMIYDEIVRLRAEHKEIKVYAALEDLCASGGYY 182 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 ++ A++ I A + +LVGSIGV+ + ++ +++G+ +++ + KA P + V+ Sbjct: 183 VAAAADEIYADKATLVGSIGVIMKGFGLEKLAEQVGLENRTLTAGNHKAFLDPLAPVDSA 242 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q +++ + F+ +V + R L +G IWTG +A +GL+D +G + Sbjct: 243 EKAHAQGLLNQIHAQFIEVVKKGRGKRLKADDDKLFNGLIWTGEQAVTLGLVDGLGSVD- 301 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 L + I ++ +++ +++ K +S S+ Sbjct: 302 ---WLAREKI--KITEVMEYHQNRHWSDRFFKEISSST 334 >gi|156743028|ref|YP_001433157.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] gi|156234356|gb|ABU59139.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] Length = 348 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 18/276 (6%) Query: 34 NSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + + I + G I ++L+ +I + D A+++ + SPGGS Sbjct: 75 GNDRIVVITVSGTIGADAGDGLFTTGLSHEQLLSQIRTAANDSRVKAVVLRVDSPGGSVV 134 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A ++ ++K++ + KP++ + +AAS GY IS A I A +L GS+GV+ Sbjct: 135 ASNELYVELKKLREKGKPLVISMGSIAASGGYYISMAGERIYANPDTLTGSLGVIVSLLN 194 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 ++LG+ KS K SP P+ + +VD +Y F+ ++ E R + Sbjct: 195 YDEAFERLGLREYVYKSGDFKDIGSPLRPPQPEEEAIWNALVDEAYQGFIDVIVEGRGME 254 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNY 258 + + L+DGRI+TG +AK +GLID +G E+ + L D I + + +N + Sbjct: 255 RTEVIRLADGRIYTGRQAKALGLIDELGNLEDAIEGAKELAGLTDALIVRYRSFNTLREL 314 Query: 259 WFCDLK-NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 +L+ NL S L + + Q + L + P Sbjct: 315 LQANLEQNLQPSDPL--GLRAIAQPRAPRLEYRFVP 348 >gi|113475281|ref|YP_721342.1| signal peptide peptidase A [Trichodesmium erythraeum IMS101] gi|110166329|gb|ABG50869.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Trichodesmium erythraeum IMS101] Length = 608 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 130/256 (50%), Gaps = 12/256 (4%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ +A + +G++ + L +++ ++ D+ A+++ ++SPGGSA A Sbjct: 317 KSNNKIAVVYAQGEVVNGSGTSRQIGGDRLAKKLRQLRLDEKVKAVVLRVNSPGGSASAS 376 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R ++ + KPVI + +AAS GY IS ++ IVA ++ GSIGV ++ Sbjct: 377 EVISREVKLMSEEKPVIVSMGNIAASGGYWISMNADRIVAEVNTITGSIGVFGVLFNIQE 436 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++ G++ VK + + ++Q +VDS Y F++ V+ +RN+ +K Sbjct: 437 IANQNGITWDVVKIGKFADLNTTSRPKTEDELVLIQKMVDSIYERFIKNVATARNLAPEK 496 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+W+GA A+K+GL+D +GG E + KI+++ ++ Sbjct: 497 VEEIAQGRVWSGANAQKLGLVDEIGGIETAIKVAAEKAELGDSWKIEEYPKSRSLEQQIF 556 Query: 264 KNLSISSLLEDTIPLM 279 ++L S +E IP M Sbjct: 557 RSL---SGMEVDIPTM 569 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 99/241 (41%), Gaps = 13/241 (5%) Query: 21 TVVYFSWSSHVEDNSP--------HVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 +++ F ++ + D+ P A + + ++ I + ++D + + Sbjct: 52 SILVFDLATSITDSRPISSTGEALQEALSSDQATTITLRKAINTLNAAAKDKKIIGIYIK 111 Query: 73 -LSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++PG + A + I +A+Q+ + I Y +S ++ I ++ Sbjct: 112 GSNAPGVTGLANLQEIRQALQRFRETGKTIIAYDMDWTEREYYLSSVADEIAINPLGVLE 171 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHW 188 G+ + ++ LDK G+ ++ K K+ PF +++P+ Q ++ + Sbjct: 172 FNGLSSETMFLSGALDKFGIGVQVTKVGKYKSATEPFLREKMSPENRQQTLQLLQDIWGQ 231 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 +++ V+ SR ++ ++D + I A + L+D V +EV + L L + Sbjct: 232 YLQTVATSRKSTTEQLQAIADNQGILMANNALQSKLVDRVVYYDEVLKKLKELTGIEEDD 291 Query: 248 K 248 K Sbjct: 292 K 292 >gi|327193444|gb|EGE60342.1| proteinase IV protein [Rhizobium etli CNPAF512] Length = 316 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 114/296 (38%), Positives = 185/296 (62%), Gaps = 13/296 (4%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D Sbjct: 18 FWRIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQV 77 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A ++S+SSPGG+ + GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++ Sbjct: 78 KAAVISISSPGGTTFGGEKIFKAIRAIAAKKPVVSDVRTLAASAGYMIATAGDTIIAGDS 137 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 138 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSY 197 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 +WFV LV++ R +P D+ L L+DG I+TG +A K+ L+D +GG+ E+ L + GV+ + Sbjct: 198 NWFVDLVADRRKLPRDEVLKLADGTIYTGRQALKMKLVDTIGGEPEIRAYLKSRGVNTDL 257 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK----------VQGLWAVWN 292 + DW+ N F +S + L+K + GL +VW Sbjct: 258 -PMVDWDKKSNTPFLLAGAVSRLITIFGYDDLVKGQDINGILPPKLLLDGLLSVWQ 312 >gi|327313455|ref|YP_004328892.1| signal peptide peptidase SppA, 67K type [Prevotella denticola F0289] gi|326946213|gb|AEA22098.1| signal peptide peptidase SppA, 67K type [Prevotella denticola F0289] Length = 592 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 4/236 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 +Y+++ V+ + + +G D+Q + + +E + +D A+++ ++S GGSA Sbjct: 306 IAIYYAYGDIVDGAA---GGMFAQGHKIDAQTVCKDLEALGKDKDVKAVVLRINSGGGSA 362 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+ I K+K KPV+ + MAAS GY +S +N IVA T++ GSIG+ +P Sbjct: 363 YASEQIWHQIMKLKKLKPVVVSMGGMAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPD 422 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +KLGV VK++ + + + + VD Y F V+E R + Sbjct: 423 ASGLFAEKLGVKFDEVKTNQHSDFGTQARPFTEEEMAFLGQYVDRGYRLFRHRVAEGRRM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ ++ G ++TG +A+K+GL+D +GG + L P Sbjct: 483 TDEQIEKIAQGHVFTGQDARKIGLVDQLGGLDVALMKAAKLAKLSGYSTCSYPEEP 538 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 105/291 (36%), Gaps = 47/291 (16%) Query: 1 MEFVLKKIKTRYV----------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS 50 M+ K + +V +L+T+ + S + E + V + + GQ+ + Sbjct: 1 MKQFFKFVFASFVGMLLFSIVMAFFALITVAGMIASQDTTKEPEANSVLVLNLSGQLTER 60 Query: 51 -------------------QELIERIERISRDDSATALIVSL-----SSPGGSAYAG-EA 85 L+E I + +D+ + + S YA +A Sbjct: 61 GEDNIISQLQGSTTGSIGLDNLLEGIHKAKNNDNIKGIYIEAGAFAADS-----YASMQA 115 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + K I + Y ++ A++ + + G+ Q ++K L Sbjct: 116 LRNVLLDFKKSGKWIIAYGDTYTQGTYYLASAADKVYLNPQGQIDWHGLASQPVFIKDLL 175 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K+GV ++ VK K+ P F+ ++ + ++S + + V SR + + Sbjct: 176 AKVGVKMQVVKVGAYKSAPEMFTGDRMSDANREQTAAYLNSIWGNITKEVGASRQLSVVQ 235 Query: 204 TLVLSDGRIWTGAEA--KKVGLIDVVGGQE---EVWQSLYALGVDQSIRKI 249 +D I A A K+ L+D + + +V + L D+ I ++ Sbjct: 236 LNAYADSMITFAAPADYVKMKLVDGLVYTDQMKDVVKKQLGLPSDKDIPQV 286 >gi|325856625|ref|ZP_08172263.1| signal peptide peptidase SppA, 67K type [Prevotella denticola CRIS 18C-A] gi|325483339|gb|EGC86314.1| signal peptide peptidase SppA, 67K type [Prevotella denticola CRIS 18C-A] Length = 592 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 4/236 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 +Y+++ V+ + + +G D+Q + + +E + +D A+++ ++S GGSA Sbjct: 306 IAIYYAYGDIVDGAA---GGMFAQGHKIDAQTVCKDLEALGKDKDVKAVVLRINSGGGSA 362 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+ I K+K KPV+ + MAAS GY +S +N IVA T++ GSIG+ +P Sbjct: 363 YASEQIWHQIMKLKKLKPVVVSMGGMAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPD 422 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +KLGV VK++ + + + + VD Y F V+E R + Sbjct: 423 ASGLFAEKLGVKFDEVKTNRHSDFGTQARPFTEEEMAFLGQYVDRGYRLFRHRVAEGRRM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ ++ G ++TG +A+K+GL+D +GG + L P Sbjct: 483 TDEQVEKIAQGHVFTGQDARKIGLVDQLGGLDVALMKAAKLAKLSGYSTCSYPEEP 538 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 106/291 (36%), Gaps = 47/291 (16%) Query: 1 MEFVLKKIKTRYV----------MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS 50 M+ K + +V +L+T+ + S + E + V + + GQ+ + Sbjct: 1 MKQFFKFVFASFVGMLLFSIVMAFFALITVAGMIASQDATKEPEANSVLVLNLSGQLTER 60 Query: 51 -------------------QELIERIERISRDDSATALIVSL-----SSPGGSAYAG-EA 85 L+E I + ++ + + + S YA +A Sbjct: 61 GEDNIISQLQGSTTGSIGLDNLLEGIHKAKKNGNIKGIYIEAGAFAADS-----YASMQA 115 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + A+ K I + Y ++ A++ + + G+ Q ++K L Sbjct: 116 LRNALLDFKKSGKWIIAYGDTYTQGTYYLASAADKVYLNPQGQIDWHGLASQPVFIKDLL 175 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K+GV ++ VK K+ P F+ ++ + ++S + + V SR + + Sbjct: 176 AKVGVKMQVVKVGAYKSAPEMFTGDRMSDANREQTAAYLNSIWGNITKEVGASRQLSVVQ 235 Query: 204 TLVLSDGRIWTGAEA--KKVGLIDVVGGQE---EVWQSLYALGVDQSIRKI 249 +D I A A K+ L+D + + ++ + L D+ I ++ Sbjct: 236 LNAYADSMITFAAPADYVKMKLVDGLVYTDQMKDLVKKQLGLPSDKDIPQV 286 >gi|300917670|ref|ZP_07134319.1| signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300415071|gb|EFJ98381.1| signal peptide peptidase SppA [Escherichia coli MS 115-1] Length = 666 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGDDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|170079132|ref|YP_001735770.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7002] gi|169886801|gb|ACB00515.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7002] Length = 272 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 8/267 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 VARI I G I + +++ +E + AL++ + SPGG+ + I+ A+ Sbjct: 8 KTRKQVARIEITGAIAADTRKRVLKALEEVEE-KKYPALLLRIDSPGGTVGDSQEIYYAL 66 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K++ + ++ ++AS G I + IVA ++ GSIGV+ + ++ L+K+GV Sbjct: 67 KKLQEKTKIVASFGNISASGGVYIGMGAQHIVANPGTITGSIGVILRGNNLERLLEKVGV 126 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 S K +KS P K S E+ ++Q+++D SY FV+ V+E+RN+ + +DG Sbjct: 127 SFKVIKSGPYKDILSFDRELTEAEENILQEMIDVSYGQFVKTVAEARNLDVETVKTFADG 186 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 RI+TG +A+++G++D +G +E+ L G+D + + PK L +S Sbjct: 187 RIFTGEQAQELGVVDRLGTEEDARIWAAKLAGLDPDKAECRTIEEPKPLITRLLSRNQLS 246 Query: 270 SLLEDT---IPLMKQTKVQGLWAVWNP 293 S + + + T Q LW ++ P Sbjct: 247 SPVGNALNWVEFELATAGQPLW-LYRP 272 >gi|300924815|ref|ZP_07140755.1| signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|301327503|ref|ZP_07220736.1| signal peptide peptidase SppA [Escherichia coli MS 78-1] gi|309793539|ref|ZP_07687966.1| signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|331653170|ref|ZP_08354175.1| signal peptide peptidase SppA, 67K type [Escherichia coli M718] gi|300419022|gb|EFK02333.1| signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|300845934|gb|EFK73694.1| signal peptide peptidase SppA [Escherichia coli MS 78-1] gi|308123126|gb|EFO60388.1| signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|323378358|gb|ADX50626.1| signal peptide peptidase SppA, 67K type [Escherichia coli KO11] gi|331049268|gb|EGI21340.1| signal peptide peptidase SppA, 67K type [Escherichia coli M718] Length = 666 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|317123138|ref|YP_004103141.1| signal peptide peptidase A [Thermaerobacter marianensis DSM 12885] gi|315593118|gb|ADU52414.1| signal peptide peptidase A [Thermaerobacter marianensis DSM 12885] Length = 311 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 14/279 (5%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDD 64 V + + ++ + +A + I G I + E++ ++++ D Sbjct: 22 VVALLWPGAGTAPGGRGTGQIAVVTIDGPIAGGGSAEGLLGAVVGADEVVAQLQKARDDP 81 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVA 123 + A+++ +++PGGSA A + I A+Q++++ KPV+ + ++ AS GY I+ ++ IVA Sbjct: 82 AVRAVVIRMNTPGGSAAAAQEIGVAVQRLRDAGKPVVASIADLGASGGYWIAAMADRIVA 141 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 SL GSIGV+ + + + KLG+ ++++KS P K S + + +++Q +V+ Sbjct: 142 NPASLTGSIGVIMEVTHYEDLYQKLGIDVETIKSGPYKDIGSATRPLTEEERRLLQGLVN 201 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y FV +V+ R + ++ L L+DGR++TG +AK+ GL+D +G E+ L Sbjct: 202 DIYQQFVDVVARGRKLSRERVLELADGRVFTGRQAKEAGLVDELGTFEDAADLAAELAGL 261 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 + + +P S L L+ Q Sbjct: 262 EDYELVDYSSPGSLLDLLRWFGTSGRLGLAQGAGLVPQL 300 >gi|330966254|gb|EGH66514.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. actinidiae str. M302091] Length = 332 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T V V + + + S H A I ++G I D ++ + + Sbjct: 48 IFFKLLT--VAFLFVAIVLPMLDFEGGASRRSSHTALIDVQGVIADKESASAENITTALR 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 DAFGDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTL--VLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + G IWTG +A +GL+D +G V Sbjct: 226 QFWQSVLDTTHRQFIASVKQGRGDRLKDMDHPEMFSGLIWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 AREVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFGGPSL 331 >gi|324113514|gb|EGC07489.1| signal peptide peptidase SppA [Escherichia fergusonii B253] Length = 618 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 15/282 (5%) Query: 21 TVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + ++ ++ +P + + G I D +E +I D A++ Sbjct: 310 AISFYDYALKTPVKTPEMIGVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS +N I+A ++L Sbjct: 370 LRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIIANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + + QMMQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDSIGVHTDGVSTSPLANM-SVTQSLPTEVQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 489 ITLVADARKSTPEQVDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WSI 547 Query: 250 KDWNPPKNYWFC--DLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + ++ D + S+ ++L I M + + Sbjct: 548 NYYQDEPTFFDMVVDSMSGSVRAMLPQAIQAMLPAPLATAVS 589 Score = 95.2 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L L+ + + S+ D++ A + I G I D Sbjct: 27 LNLLFIFLVLIGVGIWMQVSSNGSSDSASRGALLLDISGVIVDKPSNNHRLGVIGRQLFG 86 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + G+ + I +A+++ ++ K Sbjct: 87 ASSERLQENSLFDIVNTIRQAKDDSNITGIVLDLENFAGADQPSMQYIGKALREFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PVI + E Y ++ +N I + V G Y K LDKL VS + Sbjct: 147 PVIA-IGESYTQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + V + ++ ++ +R I + + I Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWVGELWQNYLNTIAANRQISAQQVFPGAQAMIADL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A L+D +G +V ++L D++ R I ++ Sbjct: 266 TKLGGDTAQYALDHKLVDALGSSADVEKALTKQFGWSKADKNYRAISFYD 315 >gi|307942848|ref|ZP_07658193.1| proteinase IV protein [Roseibium sp. TrichSKD4] gi|307773644|gb|EFO32860.1| proteinase IV protein [Roseibium sp. TrichSKD4] Length = 335 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 164/303 (54%), Gaps = 12/303 (3%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + +I ++ + + Y S ++ H+ARI I G I D EL++RIERI Sbjct: 17 KVTFWRIAAFLILAIALISLIAYVSGAADASKKGSHIARIEIDGVITDDYELLQRIERIR 76 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D +IV+++SPGGS GEAI+ A++K+ KPV++E+ ASAGY+I+ A + Sbjct: 77 EHDPVKGVIVAINSPGGSTTGGEAIYSALRKLAEDKPVVSEIRTEGASAGYMIAMAGDHT 136 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A S+ GSIGVLFQY K LD +GV++ +VKSS +KAEP +SE +P+A M+ V Sbjct: 137 IARYNSITGSIGVLFQYGNFKGLLDTIGVNMDAVKSSDLKAEPDFYSEASPEAKAMLAKV 196 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V SY WFV LV+E RN+ + L L+DG I++G A K+GLID +GG+E Q L + Sbjct: 197 VKDSYDWFVDLVAERRNMDRNAALKLADGSIYSGYTAHKLGLIDAIGGEEVAIQWLESEK 256 Query: 242 VDQSIRKIKDWNPPKN----YWFCDLKNLSISSLLEDTIPLMKQTK--------VQGLWA 289 + W P + + + + E + K K + GL + Sbjct: 257 DLSKDLPVITWRPEQTENGLPFVGAISRSFGIGVAEGLVGEAKSAKGLIPRGLTLDGLVS 316 Query: 290 VWN 292 VW Sbjct: 317 VWQ 319 >gi|262382242|ref|ZP_06075379.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_33B] gi|262295120|gb|EEY83051.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_33B] Length = 582 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGG Sbjct: 293 TKNAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGG 352 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ + Sbjct: 353 SAYISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMF 412 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P KL ++ VK++ + ++Q V+ Y F+ +E R Sbjct: 413 PNASGLFGKLALTTDIVKTNTFSDFGDLSRPMTESEKALIQGYVERGYQTFLSRCAEGRG 472 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + + GR+WTG +AK+ GL+D +GG E + L D + + KN+ Sbjct: 473 MTTEAVNAIGQGRVWTGEQAKERGLVDELGGIELAISTAAGLA-DLDQYSVTTVSGSKNF 531 Query: 259 WFCDLKN 265 L++ Sbjct: 532 LDEFLES 538 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 99/262 (37%), Gaps = 26/262 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------ 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 15 IILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLS 74 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 75 LKDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQ 134 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 135 GNYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFML 194 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + +Q + + + ++ESR I + ++ ++ + + G ID Sbjct: 195 DKLSEANREQIQSYISTIWDNIAEGIAESRGISVNDINHYANEGLFFADPVKTVECGFID 254 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + + EV + L + Sbjct: 255 ELKYKPEVEAYVKELAGQNGEK 276 >gi|326801407|ref|YP_004319226.1| signal peptide peptidase SppA, 67K type [Sphingobacterium sp. 21] gi|326552171|gb|ADZ80556.1| signal peptide peptidase SppA, 67K type [Sphingobacterium sp. 21] Length = 588 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 10/236 (4%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLS 74 Y S + + +A + G I S+ + I + DD A+++ ++ Sbjct: 294 YTSPKTEENGSQNRLAVVYAVGDIVSGEGSDEQIGSERISRAIRTVREDDKVKAVVLRIN 353 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGS+ A + I++ ++ K KP+I + ++AAS GY I+CA++ I A ++ GSIGV Sbjct: 354 SPGGSSLASDVIWKEVELTKKVKPIIVSMGDVAASGGYYIACAADSIFAQPNTITGSIGV 413 Query: 135 LFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 P ++ F +KLG++ VK+ S + ++Q V+ +Y F + V Sbjct: 414 FGIIPNLQNFFNNKLGITFDEVKTGKYADLMSVNRPLTADERDLIQQEVNKTYDTFTKKV 473 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + R I + + GR+WTGA+A K+GL+D + E + + + + Sbjct: 474 ANGRKISQSQVDSIGQGRVWTGAQAAKIGLVDRLASFNEAITAAARKAKLKDYKLV 529 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 20/240 (8%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAAS 109 E++ RI+ D+ +++ + G S + I A+ K K K ++ + Sbjct: 85 DEILLRIDAAKNDNRIKGIVLDMDGIGASFATLQEIRDALLKFKESKKFILAYSEGYSMK 144 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ ++ + GS+ G+ Q P+ K L+KLG+ + VK K+ P Sbjct: 145 G-YYLASTADKVYLNPE---GSVDFRGMAAQLPFFKGTLEKLGIEAQVVKVGTYKSAVEP 200 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKV 221 F +++P + + ++S Y +++ VS+SRNIP D ++D GR +A Sbjct: 201 FILDKMSPANKEQVNSYLNSLYDYYLGNVSKSRNIPMDSLRNIADNYSGR--DAEKALNA 258 Query: 222 GLIDVVGGQEEVWQSLY-----ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 L+D + + E+ L I+D+ PK L++ + D + Sbjct: 259 KLVDGLKYKNEIIDELKVKLGIDKKKKIKSINIEDYTSPKTEENGSQNRLAVVYAVGDIV 318 >gi|300818408|ref|ZP_07098618.1| signal peptide peptidase SppA [Escherichia coli MS 107-1] gi|300529048|gb|EFK50110.1| signal peptide peptidase SppA [Escherichia coli MS 107-1] Length = 666 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ ++ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTIENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQVFPGAQGLLVGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|265766569|ref|ZP_06094398.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_16] gi|263252946|gb|EEZ24422.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_16] Length = 592 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 14/257 (5%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A G+I D ++I + ++ DD A+++ ++SPGGS Sbjct: 303 DKSGNILAVYYASGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K +KPVI + + AAS GY ISCA++ I+A T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + VN ++Q ++ Y FV +E R++ Sbjct: 423 NVKGLTEKIGLTYDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHM 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 DK +++GR+WTG AKK+GL+D +GG + + A D I + P K Sbjct: 483 SKDKIEKIAEGRVWTGEMAKKIGLVDKLGGIGKAL-EIAAQKADLKGYTIISY-PAKKDI 540 Query: 260 FCDLKNLSISSLLEDTI 276 L ++ + +E + Sbjct: 541 LSTLFDVQPGNYVESQV 557 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 102/268 (38%), Gaps = 34/268 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------- 50 ++ +VTL + S + V + ++G + + Sbjct: 22 LFIIGVVTLVGIISSSDTETVVKKNSVMMLDLKGTLVERTQESLEGLLGKFTGETADTYG 81 Query: 51 -QELIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHE 105 +++ I++ DD+ + + L ++YA +AI +A+ K + + Sbjct: 82 LDDILASIKKAKEDDNIKGIYIQASWLD----ASYASLQAIRKALDDFKESGKFVVAYSD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y +S ++ ++ ++ G+ + K L KLG+ ++ K K+ Sbjct: 138 NYTQGLYYLSSVADKVMLNPKGMIEWRGLASAPIFYKDLLQKLGIEMQVFKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--RIWTGAEAKKV 221 PF +E++P + + + S ++ + VS SR I D + +D + E+ K Sbjct: 198 PFTATEMSPANREQVTAFIGSIWNQILDGVSASRKIGKDSLNMYADRMLMFYPSDESVKC 257 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL D + Q +V L L ++ Sbjct: 258 GLADTLIYQNDVRDYLKTLVKIDEDDRL 285 >gi|255012266|ref|ZP_05284392.1| protease IV [Bacteroides sp. 2_1_7] Length = 588 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 123/253 (48%), Gaps = 14/253 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVS 72 + + N+P +A + G+I+ ++++ + + ++ +D A++ Sbjct: 293 TLKASSTKNAPEIAVLYAEGEIKAQTPGSLYDIEQSITEKMADELIKLKNNDDVKAVVFR 352 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGGSAY E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSI Sbjct: 353 VNSPGGSAYISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSI 412 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ +P KL ++ VK++ + ++Q V+ Y F+ Sbjct: 413 GIFGMFPNASGLFGKLALTTDIVKTNTFSDLGDLSRPMTESEKALIQGYVERGYQTFLSR 472 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 +E R + + + GR+WTG +AK+ GL+D +GG E + L D + Sbjct: 473 CAEGRGMTTEAVNAIGQGRVWTGEQAKERGLVDELGGIELAISTAAGLA-DLDQYSVTTV 531 Query: 253 NPPKNYWFCDLKN 265 + KN+ L++ Sbjct: 532 SGSKNFLDEFLES 544 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 99/262 (37%), Gaps = 26/262 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------ 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 21 IILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLS 80 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 81 LKDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQ 140 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 141 GNYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFML 200 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + +Q + + + ++ESR I + ++ ++ + + G ID Sbjct: 201 DKLSEANREQIQSYISTIWDNITEGIAESRGISVNDINHYANEGLFFADPVKTVECGFID 260 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + + EV + L + Sbjct: 261 ELKYKPEVEAYVKELAGQNGEK 282 >gi|260592220|ref|ZP_05857678.1| signal peptide peptidase SppA, 67K type [Prevotella veroralis F0319] gi|260535854|gb|EEX18471.1| signal peptide peptidase SppA, 67K type [Prevotella veroralis F0319] Length = 612 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 129/258 (50%), Gaps = 5/258 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 VY+++ V+ + + +G D+Q + + +E+++ D A+++ ++S GGSA Sbjct: 326 IAVYYAYGDIVDGAA---GGLFAQGHTIDAQVVCKDLEKLTNDKDVKAVVLRVNSGGGSA 382 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+ I ++K KPV+ + MAAS Y IS SN IVA T+L GSIG+ +P Sbjct: 383 YASEQIWHQIMELKKLKPVVVSMGGMAASGAYYISAPSNWIVAEPTTLTGSIGIFGMFPD 442 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L +KLG+ VK++ + + + + + ++ Y F V+E R Sbjct: 443 FSGLLTEKLGIKFDEVKTNKFSGFGTQSRPFSEEEMAYLNQYINRGYKLFRHRVAEGRKK 502 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ ++ G +++G +A K+GL+D +GG + L + I + K+ + Sbjct: 503 TDNQIEKIAQGHVYSGQDAMKIGLVDQLGGLDVAITKAAQLAKLSN-HSITSYPAQKSMF 561 Query: 260 FCDLKNLSISSLLEDTIP 277 ++ + ++ L++ + Sbjct: 562 EQIIQESTPNNYLDEQLR 579 Score = 80.6 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 103/285 (36%), Gaps = 45/285 (15%) Query: 1 MEFVLKKIKTRYVM----------LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS 50 M+ K + +V + +T+ + S + E V + + GQ+ + Sbjct: 21 MKQFFKYVFASFVGTLLFSIIMGCFAFITIIGMIASTQTTNEIKDNSVLVLNLSGQLTER 80 Query: 51 QE-------------------LIERIERISRDDSATALIVSL-----SSPGGSAYAG-EA 85 E L+ I++ + + + + S YA +A Sbjct: 81 SEDNNIISQLQGKIGTIGLDNLLSAIDKAKNNKNIKGIYIEAGAFTADS-----YASLQA 135 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + A+ K I ++ Y +S ++N + + G+ Q +VK L Sbjct: 136 VRNALVDFKKSGKWIITYADIYTQGTYYLSSSANKVYLNPQGQIDWHGLSSQPVFVKDLL 195 Query: 146 DKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K GV ++ +K K+ F+ +++ + ++S + + VS +RNI Sbjct: 196 KKFGVKMQVMKVGTYKSATEMFTGDKMSDANREQTSAYLNSIWGNITKDVSATRNISVSS 255 Query: 204 TLVLSDGRIWTGA--EAKKVGLIDVVGGQEEVWQSLYA-LGVDQS 245 +D I A + K L+D + ++V + LG+D+ Sbjct: 256 LNAYADSMITFAAPTDYLKYKLVDGLLYTDQVKAVVKKQLGLDKD 300 >gi|313902826|ref|ZP_07836223.1| signal peptide peptidase A [Thermaerobacter subterraneus DSM 13965] gi|313466946|gb|EFR62463.1| signal peptide peptidase A [Thermaerobacter subterraneus DSM 13965] Length = 318 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 150/303 (49%), Gaps = 35/303 (11%) Query: 6 KKIKTRYVMLS--LVTLTVVYF----SWSSHVEDNSPHVARIAIRGQIE----------- 48 ++++ +V++ LV +VV + +A + I G I Sbjct: 11 RRLQWAFVLVLGLLVAGSVVALLVPGGRDGLGAGTAGQIAVVTIDGPIAAGASAEGLLGA 70 Query: 49 --DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHE 105 + +++ ++++ D + A+++ +++PGGSA A + I A+Q+++ KPV+ + + Sbjct: 71 VVGADDIVSQLQQAREDPAVAAVVIRMNTPGGSAAAAQEIGVAVQRLREAGKPVVVSIGD 130 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + AS GY I+ ++ IVA SL GSIGV+ + + + +KLG+ ++++KS P K S Sbjct: 131 LGASGGYWIAAMADRIVANPASLTGSIGVIMEVTHYEDLYEKLGIDVETIKSGPFKDIGS 190 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + +++Q +V+ Y FV +V+ R + ++ L L+DGR++TG +AK GL+D Sbjct: 191 ATRPLTAEERRLLQGLVNDIYQQFVDVVARGRGMSRERVLELADGRVFTGRQAKAEGLVD 250 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 +G E+ L + I ++ P SS L+D + + + Sbjct: 251 QLGTFEDAADLAAQLAGLEDYELI-EYGP--------------SSPLQDLLRWLGASGRT 295 Query: 286 GLW 288 GL Sbjct: 296 GLV 298 >gi|150010501|ref|YP_001305244.1| protease IV [Parabacteroides distasonis ATCC 8503] gi|149938925|gb|ABR45622.1| protease IV [Parabacteroides distasonis ATCC 8503] Length = 588 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGG Sbjct: 299 SKNAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGG 358 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ + Sbjct: 359 SAYISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMF 418 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P KL ++ VK++ + ++Q V+ Y F+ +E R Sbjct: 419 PNASGLFGKLALTTDIVKTNTFSDLGDLSRPMTESEKALIQGYVERGYQTFLSRCAEGRG 478 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + + GR+WTG +AK+ GL+D +GG E + L D + + KN+ Sbjct: 479 MTTEAVNAIGQGRVWTGEQAKERGLVDELGGIELAISTAAGLA-DLDQYSVTTVSGSKNF 537 Query: 259 WFCDLKN 265 L++ Sbjct: 538 LDEFLES 544 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 99/262 (37%), Gaps = 26/262 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------ 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 21 IILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLS 80 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 81 LKDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQ 140 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 141 GNYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFML 200 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + +Q + + + ++ESR I + ++ ++ + + G ID Sbjct: 201 DKLSEANREQIQSYISTIWDNIAEGIAESRGISVNDINHYANEGLFFADPVKTVECGFID 260 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + + EV + L + Sbjct: 261 ELKYKPEVEAYVKELAGQNGEK 282 >gi|293446138|ref|ZP_06662560.1| signal peptide peptidase SppA [Escherichia coli B088] gi|300823176|ref|ZP_07103309.1| signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|331677647|ref|ZP_08378322.1| signal peptide peptidase SppA, 67K type [Escherichia coli H591] gi|291322968|gb|EFE62396.1| signal peptide peptidase SppA [Escherichia coli B088] gi|300524330|gb|EFK45399.1| signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|324016441|gb|EGB85660.1| signal peptide peptidase SppA [Escherichia coli MS 117-3] gi|331074107|gb|EGI45427.1| signal peptide peptidase SppA, 67K type [Escherichia coli H591] Length = 666 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQVFPGAQGLLVGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|148264332|ref|YP_001231038.1| signal peptide peptidase SppA, 36K type [Geobacter uraniireducens Rf4] gi|146397832|gb|ABQ26465.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Geobacter uraniireducens Rf4] Length = 298 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 138/269 (51%), Gaps = 10/269 (3%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDN----------SPHVARIAIRGQIEDSQELIER 56 KIK L++V L ++F S ++ + + ++G I DSQE +++ Sbjct: 2 KIKWLLFGLAVVMLIFIFFVASLYIATTITGEKTDFVGKEGIGLVEVKGIILDSQETVKQ 61 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + ++++ A+++ + SPGG + I+ A++K+ +K V+ + +AAS GY I+ Sbjct: 62 LFDFKKNENVKAVVLRIESPGGVVGPSQEIYDAVKKLALKKKVVVSMGSVAASGGYYIAA 121 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + I A ++ GSIGVL ++ ++ +DK+G+ ++K+ K SP ++ + Sbjct: 122 PATKIFANPGTITGSIGVLMKFSNIEGLMDKIGMKAFTIKTGKYKDVGSPVRTMSVEDKA 181 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 M+Q V+DS++ FV+ V+E R +P ++ L+DGRI++G +A + L+D +G ++ + Sbjct: 182 MLQGVIDSTHGQFVKAVAEGRKLPLEQVKTLADGRIYSGEQALALKLVDNLGTMQDAIEE 241 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L + + K L Sbjct: 242 AGKLAGIKGEPHVITPPKKKKVLLDILME 270 >gi|157370962|ref|YP_001478951.1| protease 4 [Serratia proteamaculans 568] gi|157322726|gb|ABV41823.1| signal peptide peptidase SppA, 67K type [Serratia proteamaculans 568] Length = 618 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 22/278 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSL 73 +Y D +A I G I D + + D + A+I + Sbjct: 313 IYDYQPKPTPDQGGKIAVIFANGAIMDGPQTPGTVGGDTTAAELRQARLDPAIKAVIFRV 372 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + V+ KPV+ + MAAS GY +S ++ I+A+ ++L GSI Sbjct: 373 NSPGGSVSASEVIRSELAAVRAAGKPVVVSMGGMAASGGYWVSTPADYIIASPSTLTGSI 432 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ + LD +GV V +SP+ + + P+ QMMQ ++ Y F+ L Sbjct: 433 GIFGVINTYEQTLDSIGVHTDGVATSPLAD-LAVTKALPPEFSQMMQLNIEKGYQNFIDL 491 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++SR + + ++ G +W G++AK GL+D +G ++ + L ++K W Sbjct: 492 VAKSRKMTPQQVDQIAQGHVWLGSDAKTNGLVDQLGDFDDAVKKAAELA------QLKQW 545 Query: 253 NPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 + WF D +L+ + S +I M +Q + Sbjct: 546 ---QLNWFVDTPSLTDMVLSQFGVSIHAMLPAAIQSML 580 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 86/226 (38%), Gaps = 21/226 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D + T +++ L+ G+ + I +A+++ ++ KP+ + Sbjct: 99 DVVDSIRKAKDDKNITGMVLQLNDFAGADQPSLQYIGKALREFRDSGKPIFAIGDSYNQT 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N + + V G Y K L+KL V+ + K+ P Sbjct: 159 -QYYLASYANKVYLSPQGAVDLHGFATNNLYYKSLLEKLKVTTNIFRVGTYKSAVEPLIR 217 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ V+ +R I + + G + +G + A Sbjct: 218 DDMSPAAREADSRWIGGLWQNYLDTVAANRQITAQQLFPGAAG-VLSGMQAAGGDTAKYA 276 Query: 219 KKVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNPPKNY 258 L+D + + + L D + I D+ P Sbjct: 277 LDNKLVDELASRTVIENQLIKTFGWDKQANDFNATSIYDYQPKPTP 322 >gi|302037855|ref|YP_003798177.1| putative signal peptide peptidase SppA [Candidatus Nitrospira defluvii] gi|300605919|emb|CBK42252.1| putative Signal peptide peptidase SppA [Candidatus Nitrospira defluvii] Length = 358 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 131/281 (46%), Gaps = 19/281 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 V + + G I + + E +ER ++D+ A+++ ++SPGG+ Sbjct: 78 GTGKDKVLLMDVSGVISSENKDGFYSSPGMLATVKEELERATKDERIKAIVLRINSPGGT 137 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 A + I+ ++ K + P++ + ++ AS GY I+ A++ + A +++ GSIGV+ Sbjct: 138 VTASDIIYHELKSFKTSRKIPIVASIMDVGASGGYYIAAAADTVFAHPSTVTGSIGVIML 197 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L+K+GV +V S P K SPF + P+ + Q V+D Y F+++V + R Sbjct: 198 TVNARGLLEKVGVETNAVTSGPRKDMGSPFRAMLPEERAIFQGVIDGFYQRFLQVVQDGR 257 Query: 198 -NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 N+ + L+DGRI++G +AK GL+D +G E+ + + + P + Sbjct: 258 PNMNGETIRKLADGRIYSGEQAKAAGLVDDIGYLEDAIELAKKKAGLTEAKVVTYRRPGE 317 Query: 257 ----NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 Y S++SL + + + +W P Sbjct: 318 YQNNIYSRLVAPAPSLASLANIDLLSVVRGGSPQFMYLWMP 358 >gi|304570504|ref|YP_003004.2| PfaP [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 290 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 130/241 (53%), Gaps = 10/241 (4%) Query: 39 ARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 A I I G+I S+ +++++ I ++ + +++ ++SPGG+ A + ++ Sbjct: 25 ALIKIEGEIHSGHSTFESTGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNE 84 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + +++ + ++ + +MAAS GY I+ A++ I A ++ GSIGV+ P +K LD+ G Sbjct: 85 LMRLRKTRKIVVSMKDMAASGGYYIASAADKIFALSGTITGSIGVIAMAPNIKGLLDRYG 144 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V +++ K K S F + P+ +M+Q ++ +Y+ F++ V++ RN L++ Sbjct: 145 VKMRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFIQDVAKGRNQTVKSVQNLAE 204 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G+I++G +A + L+D +GG++E + L L D I ++ P + F L + Sbjct: 205 GKIYSGQDAFRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEDESPFDRLFMMLGSKMN 264 Query: 269 S 269 S Sbjct: 265 S 265 >gi|256839290|ref|ZP_05544800.1| signal peptide peptidase SppA, 67K type [Parabacteroides sp. D13] gi|256740209|gb|EEU53533.1| signal peptide peptidase SppA, 67K type [Parabacteroides sp. D13] Length = 582 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGG Sbjct: 293 TKNAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGG 352 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ + Sbjct: 353 SAYISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMF 412 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P KL ++ VK++ + ++Q V+ Y F+ +E R Sbjct: 413 PNASGLFGKLALTTDIVKTNTFSDLGDLSRPMTESEKALIQGYVERGYQTFLSRCAEGRG 472 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + + GR+WTG +AK+ GL+D +GG E + L D + + KN+ Sbjct: 473 MTTEAVNAIGQGRVWTGEQAKERGLVDELGGIELAISTAAGLA-DLDQYSVTTVSGSKNF 531 Query: 259 WFCDLKN 265 L++ Sbjct: 532 LDEFLES 538 Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 99/262 (37%), Gaps = 26/262 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------ 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 15 IILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLS 74 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 75 LKDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQ 134 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 135 GNYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFML 194 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + +Q + + + ++ESR I + ++ ++ + + G ID Sbjct: 195 DKLSEANREQIQSYISTIWDNITEGIAESRGISVNDINHYANEGLFFADPVKTVECGFID 254 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + + EV + L + Sbjct: 255 ELKYKPEVEAYVKELAGQNGKK 276 >gi|237708460|ref|ZP_04538941.1| protease IV [Bacteroides sp. 9_1_42FAA] gi|229457681|gb|EEO63402.1| protease IV [Bacteroides sp. 9_1_42FAA] Length = 593 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I D+ Q++ + + ++ +D A+++ ++SPGGSA Sbjct: 300 DKSGNVIAVYYAYGEILDAPGSSTEDCIDVQKMCKGLRKLRDNDDVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYP 139 Y + I+R + ++K +KPVI + + AAS GY ISCA++ I A T+L GSIG+ Y Sbjct: 360 YGSDQIWREVVRLKEKKPVIVSMGDYAASGGYYISCAADRIFADPTTLTGSIGIFGMMYS 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 K F + LG++ VK++ M + +N ++MQ+ V+ Y FV + Sbjct: 420 GEKLFTETLGLNFDVVKTNKMADLGASLGPILTRPLNASEQELMQNYVNRGYKLFVSRCA 479 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + +++GR+WTGA AK +GL+D +GG ++ + ++ I P Sbjct: 480 EGRKMSTEAIEKVAEGRVWTGAMAKDLGLVDELGGIDKALNAAATQAGIENYSIIGY--P 537 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 K F L + I + A+ Sbjct: 538 EKENIFASLLGNQKKHYVNSEIKEYLGSYYNSFKAL 573 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 104/266 (39%), Gaps = 33/266 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 + +L ++TL + S + + + +G + + + Sbjct: 22 FTILGIITLVSIVASSDTETVVKDNSIFVLDFKGSLSERVQENPLQQLLGEEFEAYGLDD 81 Query: 53 LIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 ++ I++ +D + + L +P YA E I A+ K I + A Sbjct: 82 ILASIKKAKDNDKIKGIYIQPSYLEAP----YASLEEIRNALLDFKESGKFIVAYADQYA 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ I+ +G G Q + K + KLG+ I+ + K+ PF Sbjct: 138 QKMYYLSSVADKIIINPQGSIGWHGAGMQPVFFKNLVSKLGLEIQVFRVGTYKSAVEPFI 197 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT---GAEAKKVGL 223 +E++P + M + ++S +H + VS+SR+IP D +D R E + GL Sbjct: 198 ATEMSPANREQMTECLESVWHRILADVSDSRHIPTDTLNAYAD-RYMDFCQAEEYVQCGL 256 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKI 249 D + ++EV L L K+ Sbjct: 257 ADTLMYKDEVISYLKQLSGRDEDDKL 282 >gi|301311313|ref|ZP_07217240.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 20_3] gi|300830399|gb|EFK61042.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 20_3] Length = 588 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGG Sbjct: 299 TKNAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGG 358 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ + Sbjct: 359 SAYISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMF 418 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P KL ++ VK++ + ++Q V+ Y F+ +E R Sbjct: 419 PNASGLFGKLALTTDIVKTNTFSDLGDLSRPMTESEKALIQGYVERGYQTFLSRCAEGRG 478 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + + GR+WTG +AK+ GL+D +GG E + L D + + KN+ Sbjct: 479 MTTEAVNAIGQGRVWTGEQAKERGLVDELGGIELAISTAAGLA-DLDQYSVTTVSGSKNF 537 Query: 259 WFCDLKN 265 L++ Sbjct: 538 LDEFLES 544 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 99/262 (37%), Gaps = 26/262 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------ 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 21 IILTVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPAENPFSALMGDKENMLS 80 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 81 LKDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQ 140 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 141 GNYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFIL 200 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + +Q + + + ++ESR I + ++ ++ + + G ID Sbjct: 201 DKLSEANREQIQSYISTIWDNIAEGIAESRGISVNDINHYANEGLFFADPVKTVECGFID 260 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + + EV + L + Sbjct: 261 ELKYKPEVEAYVKELAGQNGEK 282 >gi|299139693|ref|ZP_07032866.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX8] gi|298598317|gb|EFI54482.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX8] Length = 351 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 136/291 (46%), Gaps = 11/291 (3%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNS----PHVARIAIRGQIEDSQELIERIERISRD 63 I ++ +T+ + S S + S +A I + G I D+ ++ +++++ D Sbjct: 64 IAAVVIIAICITVASLAKSLGSDADGTSSLDSDSIAVIDVSGVILDADKVDKQLQKFGDD 123 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNII 121 D+ A+I+ + SPGG A A + I+ + +++ K ++ + + AS Y I+ A + I Sbjct: 124 DNVKAIILHIDSPGGGAAASQEIYHEVLRIRQEKHKKIVASIESVGASGAYYIASACDKI 183 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A S+VGS+GV+ ++ L + + + +K P ++ PK Q + Sbjct: 184 YANPASVVGSVGVIMEWTNYGDLLRWAKMKNVVIHAGELKDAGDPTRDLTPKEEAYFQSL 243 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE-EVWQSLYAL 240 VD+ Y F+ V+ R++ DK L+ G++WTG +A +GLID GG + + ++ Sbjct: 244 VDNMYVQFIHDVATGRHVGDDKIKPLATGQVWTGEQALPLGLIDAQGGFRIALIDTARSV 303 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 G+ ++ + + L + + + L+ + G + +W Sbjct: 304 GIKDEPHIVRPA--KEKHGLAALLSDGTDEIFPNPSKLLDRA--PGFYFLW 350 >gi|303236590|ref|ZP_07323172.1| signal peptide peptidase SppA, 67K type [Prevotella disiens FB035-09AN] gi|302483243|gb|EFL46256.1| signal peptide peptidase SppA, 67K type [Prevotella disiens FB035-09AN] Length = 590 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 14/275 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 +Y+++ V++ +A + + +++ +E + DD+ A+++ ++S GGSA Sbjct: 304 IAIYYAYGDIVDN---QIAGLFGNNHVIAGKQVCSDLEEMMNDDNIKAVVIRINSGGGSA 360 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E ++ I ++K KPV+ + AAS GY +S +N IVA T++ GSIG+ +P Sbjct: 361 YASEQMWHQIMELKKVKPVVVSMGGYAASGGYYMSAPANWIVAEPTTITGSIGIFGMFPD 420 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +KLG+ V ++ A S NP+ ++M+Q +D Y F V++ R + Sbjct: 421 YSGLATEKLGLKFDQVVTNKNAAFGSNVRPFNPEEMRMIQAYIDRGYATFKNRVAQGRKM 480 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + L+ G ++TG +A K+ L+D +GG + L P W Sbjct: 481 TIQQVENLAQGHVYTGEDALKIKLVDQLGGLDVAVAKAAQLAQIDDY--CTQSYPKPTSW 538 Query: 260 FCDLKNL-SISSLLEDTIPLMKQTKVQGLWAVWNP 293 F + + + L++ + GL ++ P Sbjct: 539 FEQIMEMEPTGNYLDEQLRA-------GLGNLYEP 566 Score = 97.9 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 102/278 (36%), Gaps = 36/278 (12%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------ 50 F+ I + +S+V + + + V+DNS V + + GQ+ + Sbjct: 16 FLFGLITIAFAFISIVGMVLSTTDDKTEVKDNS--VLVVNLSGQLTERVEENIFSQLRGE 73 Query: 51 -------QELIERIERISRDDSATAL-----IVSLSSPGGSAYAG-EAIFRAIQKVKNRK 97 + I+ ++ DD + + S +S YA + AI K Sbjct: 74 VQQGIGLDDFIKGLKEAKDDDKIKGIYIEAGLFSSNS-----YASLQEARNAILDFKKSG 128 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + + Y ++ A++ + ++ G+ Q Y+K L K G+ ++ K Sbjct: 129 KWVVAYGDSYTQGAYYLASAADKVWLNPQGMIDWHGLATQRVYLKDMLGKFGIKMQVSKV 188 Query: 158 SPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ F+E ++ + S ++ + VS SR + K +D I Sbjct: 189 GAYKSATETFTEEKMSDSDRAQTTAYLTSIWNNITKEVSNSRKVSVAKLNEYADSVITFA 248 Query: 216 A--EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 A + K + D + ++V + + L +++ I Sbjct: 249 APTDYIKYKMADKLLYTDQVKKEVKQLLGEEADADINQ 286 >gi|170717625|ref|YP_001784706.1| signal peptide peptidase SppA, 67K type [Haemophilus somnus 2336] gi|168825754|gb|ACA31125.1| signal peptide peptidase SppA, 67K type [Haemophilus somnus 2336] Length = 621 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 140/274 (51%), Gaps = 18/274 (6%) Query: 31 VEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAY 81 + P +A + + G I D + + + + + D + A+++ ++SPGGSA+ Sbjct: 319 AQPTQPAIAVVNVEGAIVDGESDEQNVGGDSIAQLLREANDDPNIKAVVLRVNSPGGSAF 378 Query: 82 AGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + + K+ KPV+ + MAAS GY IS ++ IVA ++ GSIG+ +P Sbjct: 379 ASEIIRQEVDNLQKSGKPVVVSMGAMAASGGYWISSTADYIVADPNTITGSIGIFAMFPT 438 Query: 141 VKPFLDKLGVSIKSVKSSP--MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + K+GV+ V ++ MK+ SP S+++ + ++Q ++ Y F+ +VS RN Sbjct: 439 FEKSMQKIGVNADGVATTDVVMKSHFSPLSKISSE---IIQLEIEHGYDQFLDVVSRGRN 495 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++ G++W+G +A L+D +G ++ + L + +S +IKD++ Sbjct: 496 LSKTQVDKIAQGQVWSGFDAYTYKLVDQLGSFDDAVEKARELVIQKSSEEIKDFSVV--- 552 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 W + + + L+++ + Q + ++ Sbjct: 553 WLTEKEPSLLGELMKNAKQHSEHNLRQYIAHLFG 586 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 111/271 (40%), Gaps = 47/271 (17%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHV-----ARIAIRGQIEDSQ--------- 51 +++ V L V L V FS +S + + + + G + D++ Sbjct: 19 RRVVMNIVFLFFVLLIVAVFSVNSSMSNKVDLTHFKGALLLNLDGYLADNRSDDTAWQEL 78 Query: 52 ----------------ELIERIERISRDDSATALIVSLSSPGG-SAYAGEAIFRAIQKVK 94 +++ I+ +D TAL++ L+ G A I +AIQ K Sbjct: 79 LLELGNQHVPRKISTFDVVNAIQAAKKDPKITALVLDLNYFDGKDIPALTYIGKAIQAFK 138 Query: 95 N-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPVI S YL++ +++I+ V G++ + Y K +KL ++ Sbjct: 139 ASKKPVIAYADNYTQS-QYLLASYADVILLNPQGEVAIEGMVAENLYFKSLFNKLEITPH 197 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + K+ PF +++ K+ + ++ + + ++V+E+R+IP + L D + Sbjct: 198 IFRVGTYKSAVEPFMLDKMSEKSRENTSRWLNQLWKSYQQIVAENRDIPLAQVLP--DSK 255 Query: 212 IWT-------GAE---AKKVGLIDVVGGQEE 232 + G + AKK GLI + +E Sbjct: 256 TYLSELKALNGNQTEYAKKRGLITELAVTQE 286 >gi|146337268|ref|YP_001202316.1| S49 family peptidase [Bradyrhizobium sp. ORS278] gi|146190074|emb|CAL74066.1| Putative peptidase S49 family; putative signal peptide peptidase SppA [Bradyrhizobium sp. ORS278] Length = 326 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 20/307 (6%) Query: 6 KKIKTRYVMLSLV-----TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 K R V + + + + S +AR+ I G I QE +E +ER+ Sbjct: 17 KLTFWRVVAVVIAIGALSAIGLAMSPRGRTALSTSGSIARVNIEGLIRSDQERVEALERL 76 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + SA A+IV ++SPGG+ E ++ ++ ++K +KP++ V +AAS GY+ + AS+ Sbjct: 77 -ENSSAEAVIVHINSPGGTTAGSEQLYDSLVRLKAKKPLVVVVEGLAASGGYIGAIASDH 135 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA ++SLVGSIGVLFQYP V L +GV I+ VKSSP+KA P+ + +P+A + D Sbjct: 136 IVAQQSSLVGSIGVLFQYPNVSELLKTVGVKIEEVKSSPLKAAPNGYEPTSPEARAALDD 195 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V SY WF LV RN+ ++DGR++TG +A ++ LID +G ++ L A Sbjct: 196 LVKDSYAWFRGLVKTRRNMDDALLEKVADGRVFTGRQAVELKLIDELGDEKTAVAWLVAN 255 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED--------------TIPLMKQTKVQG 286 + ++D+ + + S L+ + + + + G Sbjct: 256 KNVKKDLPVRDYKLVPRFGDLTFLRTATSIALDAVGLSGIARQIERTGVVQAVDRVGLDG 315 Query: 287 LWAVWNP 293 + A+W P Sbjct: 316 MLALWTP 322 >gi|300904625|ref|ZP_07122461.1| signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|301303940|ref|ZP_07210058.1| signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|300403456|gb|EFJ86994.1| signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|300840737|gb|EFK68497.1| signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|315257426|gb|EFU37394.1| signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 666 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEEAQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L DT M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDTFQAMLPAPL 632 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + SS ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSSSDTKETAGRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKDFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|212692949|ref|ZP_03301077.1| hypothetical protein BACDOR_02450 [Bacteroides dorei DSM 17855] gi|237723560|ref|ZP_04554041.1| protease IV [Bacteroides sp. D4] gi|212664505|gb|EEB25077.1| hypothetical protein BACDOR_02450 [Bacteroides dorei DSM 17855] gi|229438111|gb|EEO48188.1| protease IV [Bacteroides dorei 5_1_36/D4] Length = 593 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I D+ Q++ + + ++ +D A+++ ++SPGGSA Sbjct: 300 DKSGNVIAVYYAYGEILDAPGSSTEDCIDVQKMCKGLRKLRDNDDVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYP 139 Y + I+R + ++K +KPVI + + AAS GY ISCA++ I A T+L GSIG+ Y Sbjct: 360 YGSDQIWREVVRLKEKKPVIVSMGDYAASGGYYISCAADRIFADPTTLTGSIGIFGMMYS 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 K F + LG++ VK++ M + +N ++MQ+ V+ Y FV + Sbjct: 420 GEKLFTETLGLNFDVVKTNKMADLGASLGPILTRPLNASEQELMQNYVNRGYKLFVSRCA 479 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + +++GR+WTGA AK +GL+D +GG ++ + ++ I P Sbjct: 480 EGRKMSTEAIEKVAEGRVWTGAMAKDLGLVDELGGIDKALNAAATQAGIENYSIIGY--P 537 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 K F L + I + A+ Sbjct: 538 EKENIFASLLGNQKKHYVNSEIKEYLGSYYNSFKAL 573 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 103/266 (38%), Gaps = 33/266 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 + +L ++TL + S + + + +G + + + Sbjct: 22 FTILGIITLVGIVASSDTETVVKDNSIFVLDFKGSLSERVQENPLQQLLGEEFEAYGLDD 81 Query: 53 LIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 ++ I++ +D + + L ++YA E I A+ K I + A Sbjct: 82 ILASIKKAKDNDKIKGIYIQPSYLE----ASYASLEEIRNALLDFKESGKFIVAYADQYA 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ I+ +G G Q + K + KLG+ I+ + K+ PF Sbjct: 138 QKMYYLSSVADKIIINPQGSIGWHGAGMQPVFFKNLVSKLGLEIQVFRVGTYKSAVEPFI 197 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT---GAEAKKVGL 223 +E++P + M + ++S ++ VS+SR+IP D +D R E + GL Sbjct: 198 ATEMSPANREQMTECLESVWNRIQADVSDSRHIPTDTLNAYAD-RYMDFCQAEEYVQCGL 256 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKI 249 D + ++EV L L K+ Sbjct: 257 ADTLMYKDEVISYLKQLSGRDEDDKL 282 >gi|265757003|ref|ZP_06090865.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_33FAA] gi|263233502|gb|EEZ19131.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_33FAA] Length = 593 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I D+ Q++ + + ++ +D A+++ ++SPGGSA Sbjct: 300 DKSGNVIAVYYAYGEILDAPGSSTEDCIDVQKMCKDLRKLRDNDDVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYP 139 Y + I+R + ++K +KPVI + + AAS GY ISCA++ I A T+L GSIG+ Y Sbjct: 360 YGSDQIWREVVRLKEKKPVIVSMGDYAASGGYYISCAADRIFADPTTLTGSIGIFGMMYS 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 K F + LG++ VK++ M + +N ++MQ+ V+ Y FV + Sbjct: 420 GEKLFTETLGLNFDVVKTNKMADLGASLGPILTRPLNASEQELMQNYVNRGYKLFVSRCA 479 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + +++GR+WTGA AK +GLID +GG ++ + ++ I P Sbjct: 480 EGRKMSTEAIEKVAEGRVWTGAMAKDLGLIDELGGIDKALNAAATQAGIENYSIIGY--P 537 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 K F L + I + A+ Sbjct: 538 EKENIFASLLGNQKKHYVNSEIKEYLGSYYNSFKAL 573 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 102/266 (38%), Gaps = 33/266 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 + +L ++TL + S + + + +G + + + Sbjct: 22 FTILGIITLVGIVASSDTETVVKDNSIFVLDFKGSLSERVQENPLQQLLGEEFEAYGLDD 81 Query: 53 LIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 ++ I++ +D + + L ++YA E I A+ K I + A Sbjct: 82 ILASIKKAKDNDKIKGIYIQPSYLE----ASYASLEEIRNALLDFKESGKFIVAYADQYA 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ I+ +G G Q + K + KLG+ I+ + K+ PF Sbjct: 138 QKMYYLSSVADKIIINPQGSIGWHGAGMQPVFFKNLVSKLGLEIQVFRVGTYKSAVEPFI 197 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT---GAEAKKVGL 223 +E++P + M + ++S ++ VS+SR+IP D +D R E + GL Sbjct: 198 ATEMSPANREQMTECLESVWNRIQADVSDSRHIPTDTLNAYAD-RYMDFCQAEEYVQCGL 256 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKI 249 D + + EV L L K+ Sbjct: 257 ADTLMYKNEVISYLKQLSGRDEDDKL 282 >gi|229592113|ref|YP_002874232.1| putative peptidase [Pseudomonas fluorescens SBW25] gi|229363979|emb|CAY51518.1| putative peptidase [Pseudomonas fluorescens SBW25] Length = 327 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 18/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T +++++ L + + A I +RG I D + ++ + Sbjct: 41 IFFKLLTFVWLIAMLALFSPLMDMEKSATRGAHYTALIEVRGVIADKESASADNIVSSLR 100 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D +I+ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 101 AAFEDPKVKGVILRINSPGGSPVQSGYVYDEIRRLRGLHPDIKLYAVISDLGASGAYYIA 160 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S K+ PF Sbjct: 161 SAADQIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRTYTSGEHKSFLDPFQPQKADET 220 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + L G +W+G +A +GLID +G V Sbjct: 221 QFWQGVLDTTHRQFIASVKQGRGDRLKDKDHPELFSGLVWSGEQALPLGLIDGLGSASSV 280 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + +++ D+ ++ + D + + S + + + L + L Sbjct: 281 ARDVIG------EKELVDFTVEESPF--DRFSKKLGSSVAEKLALYMGFQGPTL 326 >gi|298374871|ref|ZP_06984829.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_19] gi|298269239|gb|EFI10894.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_19] Length = 582 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 N+P +A + G+I+ ++++ + + ++ +D A++ ++SPGG Sbjct: 293 TKNAPEIAVLYAEGEIKAQTPGNFYDIEQSITEKMADELIKLKNNDDVKAVVFRVNSPGG 352 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAY E I+R + ++K KPV+ + +AAS GY ISCA+N I+A +L GSIG+ + Sbjct: 353 SAYISEQIWRQVVELKKVKPVVVSMGNVAASGGYYISCAANKIIAEPNTLTGSIGIFGMF 412 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P KL ++ VK++ + ++Q V+ Y F+ +E R Sbjct: 413 PNASGLFGKLALTTDIVKTNTFSDLGDLSRPMTESEKALIQGYVERGYQTFLSRCAEGRG 472 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + + GR+WTG +AK+ GL+D +GG E + L D + + KN+ Sbjct: 473 MTTEAVNAIGQGRVWTGEQAKERGLVDELGGIELAISTAAGLA-DLDQYSVTTVSGSKNF 531 Query: 259 WFCDLKN 265 L++ Sbjct: 532 LDEFLES 538 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 99/262 (37%), Gaps = 26/262 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH---VARIAIRGQIEDS------------------ 50 ++ L+++T+ Y + D +P V +I + G + D+ Sbjct: 15 IIITVLISMTIGYIATVGSTPDYTPKSNTVFKIKLDGTLADNPTENPFSALMGDKENMLS 74 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+E I ++D + + + + EAI R++ K + + Sbjct: 75 LKDLLETIRIAKQNDKIAGIYIESGLLSSGSASLEAIRRSLIDFKESGKFVVAYADNFTQ 134 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y + ++ + ++ G+ Q + K +DK+G+ ++ K K PF Sbjct: 135 GNYFLCSVADKVFLNPQGILELTGLASQTLFYKGLMDKVGIEMQIFKVGTYKGAVEPFML 194 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKVGLID 225 +++ + +Q + + + ++ESR I + ++ ++ + + G ID Sbjct: 195 DKLSEANREQIQSYISTIWDNIAEGIAESRGISVNDINHYANEGLFFADPVKTVECGFID 254 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + + EV + L + Sbjct: 255 ELKYKPEVEAYVKELAGQNGEK 276 >gi|254470780|ref|ZP_05084183.1| protease IV [Pseudovibrio sp. JE062] gi|211959922|gb|EEA95119.1| protease IV [Pseudovibrio sp. JE062] Length = 302 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 161/276 (58%), Gaps = 12/276 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + H+ARI I G I + +E +E I++DD+ +IVS++SPGG+ GEA++ Sbjct: 11 GELARSEKHIARIEISGPITYDRRQLEMLEAIAKDDTVQGVIVSINSPGGTTSGGEALYN 70 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A++K+ +KPV + + ASA YL + AS+ +VA TSL GSIGVLFQY K LDK+ Sbjct: 71 ALRKIAEKKPVTASITTLGASAAYLSAIASDHLVAQYTSLTGSIGVLFQYGNAKGLLDKI 130 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV + ++KS+P+KAEP+ + P+ + +QD++D +Y WFV LV+E R + ++ L L+ Sbjct: 131 GVEMDAIKSAPLKAEPNFYEPATPEVKEALQDIIDDTYMWFVGLVAERRGLSQERALQLA 190 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---------- 258 +G+++TG +AK + LID +GG++ Q L S KI DW P + Sbjct: 191 NGQVYTGHQAKGLELIDEIGGEQAAHQWLIEKKGLSSDLKIIDWKPESDERTLPFPANLL 250 Query: 259 -WFCDLKNLSISSLLEDTIPLMKQT-KVQGLWAVWN 292 + I SLL+ ++ + + GL +VW Sbjct: 251 GFLGSENQNLIHSLLKTAKSVVDSSLPLDGLVSVWQ 286 >gi|124515664|gb|EAY57173.1| Peptidase S49 (SppA) [Leptospirillum rubarum] gi|206602280|gb|EDZ38762.1| Peptidase S49 (SppA) [Leptospirillum sp. Group II '5-way CG'] Length = 295 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 13/284 (4%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIEDSQELIERIERISRDDSAT 67 + +++ L + + H P + I I G I S++ I +I ++ D Sbjct: 13 IFIAVTALIFLLGRAAGHFGRALPLVGGAEIGVIRINGVILHSEKTIRQIRTLASDPEVK 72 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ ++SPGG+ + I+ + K + + K V++ + + AS Y I+ AS+ I+A+ Sbjct: 73 AILLRINSPGGAVVPSQDIYEEVLKARKKGKIVVSSIGTVGASGAYYIASASDFIMASSG 132 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 SL GSIGV+ + VK LDK+GV + VKS MK SPF + M+ ++D+ + Sbjct: 133 SLTGSIGVIMELAEVKDLLDKIGVHSEVVKSGKMKDVGSPFRPMTADEKAYMKSLLDNIH 192 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ VS+ R++ DK L+DGR++TG A + L+D +G + + + + I Sbjct: 193 QQFILAVSKGRHLSVDKIDPLADGRVFTGEMAFRYHLVDGIGDYRDALRKAATMAHLKVI 252 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 I++++ K L + +S+LL + + G W++ Sbjct: 253 PAIREFH--KKGVLNSLISSKVSTLLGGGLG-----ESTGFWSI 289 >gi|16330327|ref|NP_441055.1| protease IV [Synechocystis sp. PCC 6803] gi|2499882|sp|P73689|SPPA_SYNY3 RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV homolog; AltName: Full=Signal peptide peptidase gi|1652816|dbj|BAA17735.1| protease IV [Synechocystis sp. PCC 6803] Length = 610 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 13/277 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPG 77 W + D P +A + + G I + E + I +DD A+++ ++SPG Sbjct: 310 WETENHDQDPKIAIVYLEGSIVNGRGTWENIGGDRYGELLRTIRQDDDIKAVVLRINSPG 369 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA A + I+R ++ ++ +KPVI + +AAS GY I+ A IVA ++ GSIGV Sbjct: 370 GSASAADIIWREVELLQAQKPVIISMGNVAASGGYWIATAGEKIVAQPNTVTGSIGVFSI 429 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 V+ D+LG++ V + + S + + Q VD Y F+ V +R Sbjct: 430 LFNVENLGDRLGLNWDEVATGELANVGSSIKPKTELELAIFQRSVDQVYEIFLDKVGRAR 489 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 N+ ++ GR+WTG A+KVGL+D +GG + A ++K++ P+ Sbjct: 490 NLSPTALDSVAQGRVWTGLAAQKVGLVDQLGGLQTAVNLAAAQAELGEQWQVKEYPTPRG 549 Query: 258 YWFCDLKNLSISSLLED---TIPLMKQTKVQGLWAVW 291 L N I L E +P +T Q L W Sbjct: 550 -LNSLLWNNLIHGLTETNSVVLPPFLRTNWQQLEREW 585 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 109/261 (41%), Gaps = 22/261 (8%) Query: 21 TVVYFSWSSHVEDNSPHVAR----IAIRGQIEDSQELIERIERISRDDSATALIVS---- 72 T + + ++D SP ++ + + +I + ++ IE+ + DD AL++ Sbjct: 49 TALILDLAIPIQDTSPTLSLQQSLLGNQEEILPLRTVVNAIEKAAEDDRIVALLIDGRRS 108 Query: 73 --LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA-GYLISCASNIIVAAETSLV 129 + G A E I+ ++ K ++ + S GY ++ ++ I+ V Sbjct: 109 NQVD---GYANLSEVQQALIKFKQSGKKIVAY--GLNYSELGYYLAATADTILINPMGGV 163 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYH 187 G+ Q + L K G+ +++++ K P++ ++P+ Q Q +++ + Sbjct: 164 EINGLGAQPIFFTGALAKAGIGVQTLRVGSYKGAVEPYTRENLSPENRQQQQLLLNQIWQ 223 Query: 188 WFVRLVSESRNIPYDKTLVLS--DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQ 244 ++ V+ +R++ + ++ G ++ A + L+D V +EV L GV Sbjct: 224 IYLTSVANNRSLTVPQLQAIASDQGLLF-ADIALREKLVDKVTYWDEVLAELKQAGVWIN 282 Query: 245 SIRKIKDWNPPKNYWFCDLKN 265 KI++ K + L Sbjct: 283 DPEKIEEQEEDKEFRKISLAE 303 >gi|319953646|ref|YP_004164913.1| signal peptide peptidase sppa, 67k type [Cellulophaga algicola DSM 14237] gi|319422306|gb|ADV49415.1| signal peptide peptidase SppA, 67K type [Cellulophaga algicola DSM 14237] Length = 586 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 126/251 (50%), Gaps = 10/251 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 + + +A I +G+I + + + ++ DD+ A+++ ++SPGGS Sbjct: 294 TKLYKGDDKIAVIYAQGEILYGEGGPDVIGQGIINKSLKEAREDDAVKAIVLRVNSPGGS 353 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I+R I+ K KPV+ + ++AAS GY I+ ++ I A T++ GSIGV P Sbjct: 354 ALTSDIIWREIELTKAIKPVVVSMGDVAASGGYYIAVGADKIFAEPTTITGSIGVFGTIP 413 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +G++ + V ++ + S F ++ M+Q+ V+S+Y F+ V++ R I Sbjct: 414 NATELAKNIGINAEQVGTNKNSVDYSLFEPMSDGFRNMVQEGVESTYTTFLERVAQGRKI 473 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + ++ GR+W+G +AK +GL+D +G ++ + L +K + K+ + Sbjct: 474 TVAEADSMAQGRVWSGLDAKNLGLVDELGNLDDAIKGAAELAEISEF-GVKIFPKYKSGF 532 Query: 260 FCDLKNLSISS 270 +++ +S Sbjct: 533 ERFMEDYGGAS 543 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 92/216 (42%), Gaps = 28/216 (12%) Query: 51 QELIERIERISRDDSATAL------IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 E+I I+ D+ + I++ +AI R ++ K + Sbjct: 78 DEIIHAIKVAKNDNKIKGISINNNFILA------GLSQTQAIRRELEDFKTSGKFVYAYA 131 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 ++ Y ++ ++ + E VGS+ G+ + + K +K GV ++ ++ K Sbjct: 132 DLYVQKDYYLASVADSLFLNE---VGSLDFKGLSSEVLFYKDLQEKAGVKMEVIRHGKYK 188 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGA 216 + P+ +E++ +++++ S + V ++ SRN+ + ++D GR+ Sbjct: 189 SAVEPYLANEMSEANRTQIKELLSSLWGSMVDEIAISRNMTPENLNSIADTLGGRM--PQ 246 Query: 217 EAKKVGLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 A++ GL+D V +E ++ L VD+ + + Sbjct: 247 LARQSGLVDGVLFFDEYENKLKNALKLAVDKDLNYV 282 >gi|293415083|ref|ZP_06657726.1| signal peptide peptidase SppA [Escherichia coli B185] gi|291432731|gb|EFF05710.1| signal peptide peptidase SppA [Escherichia coli B185] Length = 666 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEAQQMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|325497076|gb|EGC94935.1| protease 4 [Escherichia fergusonii ECD227] Length = 594 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 15/282 (5%) Query: 21 TVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + ++ ++ +P + + G I D +E +I D A++ Sbjct: 286 AISFYDYALKTPVKTPEMIGVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIV 345 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS +N I+A ++L Sbjct: 346 LRVNSPGGSVTASEVIRSELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIIANPSTLT 405 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + + QMMQ +++ Y F Sbjct: 406 GSIGIFGVINTVENSLDSIGVHTDGVSTSPLANM-SVTQSLPTEVQQMMQLSIENGYKRF 464 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 465 ITLVADARKSTPEQVDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WSI 523 Query: 250 KDWNPPKNYWFC--DLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + ++ D + S+ ++L I M + + Sbjct: 524 NYYQDEPTFFDMVVDSMSGSVRAMLPQAIQAMLPAPLATAVS 565 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L L+ + + S+ D++ A + I G I D Sbjct: 3 LNLLFIFLVLIGVGIWMQVSSNGSSDSASRGALLLDISGVIVDKPSNNHRLGVIGRQLFG 62 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + G+ + I +A+++ ++ K Sbjct: 63 ASSERLQENSLFDIVNTIRQAKDDSNITGIVLDLENFAGADQPSMQYIGKALREFRDSGK 122 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PVI + E Y ++ +N I + V G Y K LDKL VS + Sbjct: 123 PVIA-IGESYTQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLKVSTHVFRV 181 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + V + ++ ++ +R I + + I Sbjct: 182 GTYKSAVEPFIRDDMSPAAREADSRWVGELWQNYLNTIAANRQISAQQVFPGAQAMIADL 241 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A L+D +G +V ++L D++ R I ++ Sbjct: 242 TKLGGDTAQYALDHKLVDALGSSADVEKALTKQFGWSKADKNYRAISFYD 291 >gi|28870992|ref|NP_793611.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato str. DC3000] gi|28854241|gb|AAO57306.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. tomato str. DC3000] gi|331019162|gb|EGH99218.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 332 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 126/294 (42%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T V V + + + S H A I ++G I D ++ + + Sbjct: 48 IFFKLLT--VAFLFVAIVLPMLDFEGGASRRSSHTALIDVQGVIADKESASAENITTALR 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 DAFGDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V R + + G +WTG +A +GL+D +G V Sbjct: 226 QFWQSVLDTTHRQFIASVKLGRGDRLKDKDHPEMFSGLVWTGEQAVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 AREVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFGGPSL 331 >gi|24216571|ref|NP_714052.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|24197892|gb|AAN51070.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] Length = 317 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 143/283 (50%), Gaps = 17/283 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVV-------YFSWSSHVEDNSPHVARIAIRGQI--------- 47 + + T +++ LV +++ + + A I I G+I Sbjct: 10 ITFVLTTLSILIGLVNISLATTTSKYSRTTGGTFFSTAPIGAALIKIEGEIHSGHSTFES 69 Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 S+ +++++ I ++ + +++ ++SPGG+ A + ++ + +++ + ++ + +MA Sbjct: 70 TGSESILQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMA 129 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY I+ A++ I A ++ GSIGV+ P +K LD+ GV +++ K K S F Sbjct: 130 ASGGYYIASAADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEGKYKDSLSLF 189 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P+ +M+Q ++ +Y+ F++ V++ RN L++G+I++G +A + L+D + Sbjct: 190 RDSTPEEDEMIQKMLSDTYNEFIQDVAKGRNQTVKSVQNLAEGKIYSGQDAFRNKLVDEI 249 Query: 228 GGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GG++E + L L D I ++ P + F L + S Sbjct: 250 GGRKEALEELSRLCQYDGEIPLYEEDESPFDRLFMMLGSKMNS 292 >gi|83718579|ref|YP_442246.1| peptidase, U7 family protein [Burkholderia thailandensis E264] gi|257138439|ref|ZP_05586701.1| peptidase, U7 family protein [Burkholderia thailandensis E264] gi|83652404|gb|ABC36467.1| peptidase, U7 family protein [Burkholderia thailandensis E264] Length = 333 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLAVLGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDSVAR 287 Query: 236 SLYA 239 + Sbjct: 288 DVLK 291 >gi|90421920|ref|YP_530290.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB18] gi|90103934|gb|ABD85971.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB18] Length = 325 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 150/280 (53%), Gaps = 15/280 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S + S +AR+ I G I + +E +ER+ + +A A++V ++SPGG+ E ++ Sbjct: 43 SGPLAGTSGAIARVKIDGLIRSDADRVEALERLEK-SAAAAVVVHINSPGGTTAGSEQLY 101 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+ ++K +KP++ + +AAS GY+ + AS+ IVA ++SLVGSIGVLFQ+P + Sbjct: 102 DALVRLKAKKPLVVVIEGLAASGGYIAAIASDHIVAQQSSLVGSIGVLFQFPNFTELMKT 161 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV ++ VKSSP+KA P+ F +P+A ++ +V SY WF LV R + + Sbjct: 162 VGVKVEEVKSSPLKAAPNGFEPTSPEARAALESLVKDSYAWFRGLVKSRRGMDDQLLEKV 221 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 +DGR++TG +A + LID +G ++ L A ++ ++D+ + + Sbjct: 222 ADGRVFTGRQAVDLKLIDQLGDEKTAIAWLVAEKKVKADLPVRDYKLTPRFGDLTFLRAA 281 Query: 268 ISSLLED--------------TIPLMKQTKVQGLWAVWNP 293 S L+ + ++Q + G+ A+W P Sbjct: 282 TSITLDALGLNAVARQIERAGVVQSVEQLGLDGMLALWRP 321 >gi|289664822|ref|ZP_06486403.1| protease IV [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 633 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG +E S + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMQEAVADAADRAKLSSGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + L + L A P Sbjct: 571 LMSGFAGSRMGAWM--LSDSGMARALVARSLP 600 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANELYLDPM---GSVMLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ + +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWQRYLADIGTARKLSPAQLTAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVKRGVADS 305 >gi|83748461|ref|ZP_00945483.1| protease IV [Ralstonia solanacearum UW551] gi|83724872|gb|EAP72028.1| protease IV [Ralstonia solanacearum UW551] Length = 378 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L ++ + F S+ + H A +++ G+I ++ + +E Sbjct: 92 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVSLDGEIAASTNASAENINASLEAA 151 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 152 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 211 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 212 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 271 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D +G + V +++ Sbjct: 272 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGIGSADFVARNV 331 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 332 I------KAPDMVDYTVKENFAERVARKFGTAMGAGAIKALAATGQLKLLM 376 >gi|317492301|ref|ZP_07950730.1| signal peptide peptidase SppA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919640|gb|EFV40970.1| signal peptide peptidase SppA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 443 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 12/265 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAY 81 + + +A I G I D + +I + A+++ ++SPGGS Sbjct: 146 AKQSGSEIAVIFADGAIMDGEATPGNVGGDTTANQIRDARLNPKIKAIVLRVNSPGGSVS 205 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + KPV+ + +AAS GY IS ++ IVA+ ++L GSIG+ Sbjct: 206 ASEVIRSELAAARAAGKPVVVSMGGLAASGGYWISTPADYIVASPSTLTGSIGIFGVINT 265 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD +GV V +SP+ + + QMMQ +++ Y+ F+ LV+++RN Sbjct: 266 FENTLDSIGVHTDGVATSPLAD-LTVTKPLPEAFSQMMQINIENGYNNFINLVAKARNKT 324 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYW 259 ++ ++ GR+W G++AKK GL+D +G ++ L ++ + +P Sbjct: 325 PEQVDAIAQGRVWLGSDAKKNGLVDQLGDFDDAVSKAAELAKLKTYQLNWFVEDPSFGQM 384 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKV 284 S+ + L + M + Sbjct: 385 LLGQFTGSVQAALPSAVRAMLPESL 409 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 18/140 (12%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFV 190 G+ Y K LDKL VS + K+ P +++P A + ++ ++ Sbjct: 6 GMATNNLYYKTLLDKLKVSTHIFRVGTYKSAVEPMIRDDMSPAARDADNQWLSGMWNNYL 65 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAK---------KVGLIDVVGGQEEVWQSLYAL- 240 V+ +R I ++ ++G I G +A L+D + + EV Sbjct: 66 TTVAANRQITTEQLFPGAEG-ILKGLQAVGGDTAKYALSNKLVDALASRSEVENLFTKAF 124 Query: 241 -----GVDQSIRKIKDWNPP 255 D S + D+ PP Sbjct: 125 GWNKSTKDFSAISMYDYTPP 144 >gi|150004168|ref|YP_001298912.1| protease IV [Bacteroides vulgatus ATCC 8482] gi|294777915|ref|ZP_06743357.1| signal peptide peptidase SppA, 67K type [Bacteroides vulgatus PC510] gi|149932592|gb|ABR39290.1| protease IV [Bacteroides vulgatus ATCC 8482] gi|294448244|gb|EFG16802.1| signal peptide peptidase SppA, 67K type [Bacteroides vulgatus PC510] Length = 593 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I D+ Q++ + + ++ +D A+++ ++SPGGSA Sbjct: 300 DKSGNIIAVYYAYGEILDAPGSSTEDCIDVQKMCKDLRKLRDNDDVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYP 139 Y + I+R + ++K +KPVI + + AAS GY ISCA+N I A T+L GSIG+ Y Sbjct: 360 YGSDQIWREVVRLKEKKPVIVSMGDYAASGGYYISCAANRIFADPTTLTGSIGIFGMMYS 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 K F + LG++ VK++ M + +N ++MQ+ V+ Y FV + Sbjct: 420 GEKLFTETLGLNFDVVKTNKMADLGASLGPVLTRPLNASEQELMQNYVNRGYKLFVNRCA 479 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + +++GR+WTGA AK +GL+D +GG ++ + ++ I P Sbjct: 480 EGRKMSTEAIEKVAEGRVWTGAMAKDLGLVDELGGIDKALNAAATQAGIENYSIIGY--P 537 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 K F L + I + A+ Sbjct: 538 EKENIFASLLGNQKKHYINSEIKEYLGSYYNSFKAL 573 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 33/266 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 + +L ++TL + S + + + +G + + + Sbjct: 22 FTILGIITLVGIVASSDTETVVKDNSIFVLDFKGSLSERVQENPLQQLLGEEFEAYGLDD 81 Query: 53 LIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 ++ I++ +D + + L ++YA E I A+ K I + A Sbjct: 82 ILASIKKAKDNDKIKGIYIQPSYLE----ASYASLEEIRNALLDFKESGKFIVAYADQYA 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ I+ +G G Q + K + KLG+ ++ + K+ PF Sbjct: 138 QGMYYLSSVADKIIINPQGSIGWHGAGMQPVFFKNLVSKLGLEVQVFRVGTYKSAVEPFI 197 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV---GL 223 +E++P + M + ++S +H + VS+SR IP D +D R +A++ L Sbjct: 198 ATEMSPANREQMTECLESVWHRILADVSDSRRIPTDTLNAYAD-RYMDFCQAEEYIQCKL 256 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKI 249 D + ++EV L L K+ Sbjct: 257 ADTLMYKDEVISYLKQLSGRDENDKL 282 >gi|86606131|ref|YP_474894.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] gi|86554673|gb|ABC99631.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] Length = 346 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 31/265 (11%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSA 80 + + + I G I + ++++ D + A+++ ++SPGG+ Sbjct: 42 EAPRGANRIEVVTIEGTIGGPRGSTLVGLPTSPLDQLREAVEDRAVKAVLLRINSPGGAV 101 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + ++RA+ ++ KPVI + ++AAS GY ++ A++ I A +L GSIGV+ Sbjct: 102 GSSQELYRAVTALREAGKPVIAVMEDVAASGGYYVASAADKIYANPGTLTGSIGVIISGL 161 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-- 197 LD G+ ++ K+ K SPF P+ +++Q++V+ + FVR V+ R Sbjct: 162 NFGKLLDNYGIEPQTFKTGEYKDILSPFRAATPQEQRLLQELVEDTLDQFVRDVARGRQR 221 Query: 198 -------------------NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ + L+DGRI+TGA+A ++GL+D +GG E + L Sbjct: 222 LPDKGAEKVLDAEMIARRQSLDEARVRQLADGRIFTGAQAVELGLVDALGGYAEAVEDLR 281 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDL 263 + D S+ +P + L Sbjct: 282 RMTGDPSLSPATARDPFQRALQRLL 306 >gi|207725234|ref|YP_002255630.1| protease protein [Ralstonia solanacearum MolK2] gi|206590468|emb|CAQ37430.1| protease protein [Ralstonia solanacearum MolK2] Length = 414 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L ++ + F S+ + H A +++ G+I ++ + +E Sbjct: 128 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVSLDGEIAASTNASAENINASLEAA 187 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 188 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 247 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 248 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 307 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D +G + V +++ Sbjct: 308 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGIGSADFVARNV 367 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 368 I------KAPDMVDYTVKENFAERVARKFGTAMGAGAIKALAATGQLKLLM 412 >gi|239501011|ref|ZP_04660321.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB900] Length = 338 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDASSNQAVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 104 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGANKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 NPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKTNDPAIFSGLFWTGEQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + + K+Q Sbjct: 284 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQDAKLQ 338 >gi|21244537|ref|NP_644119.1| protease IV [Xanthomonas axonopodis pv. citri str. 306] gi|21110210|gb|AAM38655.1| protease IV [Xanthomonas axonopodis pv. citri str. 306] Length = 633 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + DD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDDVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG +E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMQEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + L + L A P Sbjct: 571 FMSGFAGSRMGAWM--LSDSGMARALLARSLP 600 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKLQPSGFASQ-REVAVALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWRRYLADVGTARKLSPAQLAAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVQRGVADS 305 >gi|288803512|ref|ZP_06408943.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica D18] gi|288333935|gb|EFC72379.1| signal peptide peptidase SppA, 67K type [Prevotella melaninogenica D18] Length = 592 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 15/253 (5%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISRD 63 VT+ + + + D VA G I D +Q + + +E++++D Sbjct: 286 VTIADMVNTEDKNQGDKDNEVAVYYAYGDIVDGVVGGLFSQDHQIDAQVVCKDLEKLAKD 345 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 A++V ++S GG AYA E I+ I ++K KPV+ + MAAS GY +S +N IVA Sbjct: 346 KDVKAVVVRVNSGGGDAYASEQIWHQIMELKKLKPVVVSMGGMAASGGYYMSAPANWIVA 405 Query: 124 AETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 T++ GSIG+ + V L +KLG+ VK++ + + + + + Sbjct: 406 EPTTITGSIGIFGMFADVSGLLREKLGLKFDEVKTNKYADFGTRARPFTEEEMSYLSQYI 465 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + Y F V+E R + ++ ++ G ++TG +A+K+GL+D +GG + L Sbjct: 466 NRGYKLFRHRVAEGRKMTEEQVEKVAQGHVFTGQDAQKIGLVDQLGGLDVAVAKAAQLAK 525 Query: 243 DQSIRKIKDWNPP 255 + R P Sbjct: 526 LPNYRTCAYPKEP 538 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 99/268 (36%), Gaps = 37/268 (13%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QELI 54 + +L T+ + S + E V + + GQ+ + +++ Sbjct: 24 LFALFTIAGMIASQDTTKEPEDNSVLVLNLSGQMSERSENNFLSQLQGSQINSLGLDDML 83 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGE------AIFRAIQKVKNRKPVITEVHEMAA 108 E I + +D + + A+A + A+ +A+ K + I + Sbjct: 84 EGIRKAKDNDKIKGIYIEA-----GAFASDSYASMQALRKALLDFKKSRKWIIAYADTYT 138 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y +S ++ + + G+ + ++K L K GV ++ VK K+ F+ Sbjct: 139 QGTYYLSSVADKVYLNPQGQIDWHGLASKPVFIKDLLAKFGVKMQVVKVGAYKSATEMFT 198 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLI 224 +++ + ++S + + V SR++ + +D I E K+ L+ Sbjct: 199 GDKMSDANREQTSAYLNSIWGNITKEVGASRSLSVAQLNAYADSMITFADPQEYVKLKLV 258 Query: 225 DVVGGQE---EVWQSLYALGVDQSIRKI 249 D + + E+ + + D+ I ++ Sbjct: 259 DGLVYTDQIKEIVKKQLGIETDKDINQV 286 >gi|152980027|ref|YP_001353040.1| U7 family peptidase [Janthinobacterium sp. Marseille] gi|151280104|gb|ABR88514.1| peptidase U7 family [Janthinobacterium sp. Marseille] Length = 334 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 16/270 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSS--HVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 I ++V ++L+ + S +E+ PH A I I G IE D+ +I + + Sbjct: 51 IFFKFVTVALIAFALWMSFGPSVGDMENVGPHTALIKIDGTIEAKGAGDADSVISALTKA 110 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCA 117 D + LI+ ++SPGGS I + +++ + KP+ V+EM AS GY I+ A Sbjct: 111 YADPGSVGLILQINSPGGSPVQAGIINDEMTRLRKKYPQKPLYVVVNEMCASGGYYIAVA 170 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + SLVGSIGVL ++KLGV + + + K PFS Sbjct: 171 ADRIYVNKASLVGSIGVLMDGFGFTGTMEKLGVERRMLTAGNNKGFMDPFSPQTETQKHY 230 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 QD+++ + F+ +V + R +T G +WTGA++ ++GL D G E V + Sbjct: 231 AQDMLNEIHQQFIDVVRKGRGKRLKETPETFSGLVWTGAKSIELGLADGFGTVESVARD- 289 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + I D+ + L+ Sbjct: 290 -----EFKSTNIVDYTQREGLSDRVLRKFG 314 >gi|158333242|ref|YP_001514414.1| signal peptide peptidase SppA [Acaryochloris marina MBIC11017] gi|158303483|gb|ABW25100.1| signal peptide peptidase SppA, 36K type [Acaryochloris marina MBIC11017] Length = 273 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 10/271 (3%) Query: 31 VEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + +AR+ I+G I + ++E ++ I L++ + SPGG+ I+ Sbjct: 5 FKGARKQIARLEIKGAIAGATRKHVLEALKTIEE-KGYPVLLLRIDSPGGTVVDSHEIYS 63 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A+ K++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+ Sbjct: 64 ALIKLREKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKV 123 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GVS K +KS P K + E+ Q++QD++DSSY FV +V+E RN+ D + Sbjct: 124 GVSFKVIKSGPYKDILAFDRELTEPERQILQDLIDSSYSQFVEIVAEGRNLEVDAVKQFA 183 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLS 267 DGR++TG +A ++GL+D +G +E+ L G+D K K++W L Sbjct: 184 DGRVFTGQQALELGLVDRLGTEEDARCWAAELAGLDPEKAKCNTIEEHKSFWSKLLPGSR 243 Query: 268 ISS-----LLEDTIPLMKQTKVQGLWAVWNP 293 SS + D + T LW ++ P Sbjct: 244 QSSWSVPPQVADWVNFEIATNGLPLW-LYRP 273 >gi|184159172|ref|YP_001847511.1| periplasmic serine protease [Acinetobacter baumannii ACICU] gi|332851109|ref|ZP_08433218.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332869618|ref|ZP_08438829.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013113] gi|332875999|ref|ZP_08443785.1| signal peptide peptidase SppA [Acinetobacter baumannii 6014059] gi|183210766|gb|ACC58164.1| Periplasmic serine protease (ClpP class) [Acinetobacter baumannii ACICU] gi|322509086|gb|ADX04540.1| Putative protease [Acinetobacter baumannii 1656-2] gi|332730273|gb|EGJ61598.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332732665|gb|EGJ63897.1| signal peptide peptidase SppA [Acinetobacter baumannii 6013113] gi|332735865|gb|EGJ66906.1| signal peptide peptidase SppA [Acinetobacter baumannii 6014059] Length = 365 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S +S H+A + I G I+ +S++ Sbjct: 71 IFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDASSNQAVNSEDT 130 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 131 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 190 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 191 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 250 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 251 NPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKTNDPAIFSGLFWTGEQAIQLGVADRSGN 310 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + + K+Q Sbjct: 311 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQDAKLQ 365 >gi|260911480|ref|ZP_05918069.1| signal peptide peptidase SppA [Prevotella sp. oral taxon 472 str. F0295] gi|260634409|gb|EEX52510.1| signal peptide peptidase SppA [Prevotella sp. oral taxon 472 str. F0295] Length = 591 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 17/277 (6%) Query: 30 HVEDNSPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSS 75 V ++ +A G+I S+++ + +E + DD A+++ ++S Sbjct: 296 DVNTDNGTIAIYYAEGEIVQIAPGGMLNNSTNIVSKDICKNLEDLKNDDDIKAVVLRVNS 355 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG AYA E I+ + +++ +KPV+ + + AAS GY +SC +N IVA +L GSIG+ Sbjct: 356 PGGDAYASEQIWHQVTELRKKKPVVVSMGDYAASGGYYMSCGANWIVAEPNTLTGSIGIF 415 Query: 136 FQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSP-FSEVNPKAVQMMQDVVDSSYHWFVRLV 193 +P + + +KLGV VK++ A + + + M+Q V+ Y F+ V Sbjct: 416 GVFPDLSGLVTEKLGVKFDEVKTNANSAFGNIAARPFSATEMAMLQGYVNRGYATFLNRV 475 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 S+ R + D ++ GR+W G EA K+ L+D +GG +E + L + + ++ Sbjct: 476 SQGRKMSVDNIDKIAQGRVWLGNEALKIKLVDQLGGIKEAVEKAAQLAKLKDY-GLAEYP 534 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 P ++ ++ + L++ + L + + Sbjct: 535 APASWQDQLFNSVVPRNTLDEQLRLTLGAAYEPFMLI 571 Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 39/278 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED------------- 49 F+ I ++M+S++ + S + + V I + G I + Sbjct: 16 FLFCAISFAFMMMSIIGMIA---STDTETKLKDNSVLTINLSGSINEMAAPNVLGFLSGN 72 Query: 50 ------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE----AIFRAIQKVKNRKPV 99 +++ I++ +D + + GG AG + A+ K Sbjct: 73 TIENTGLNDMLLAIKKAKNNDDIKGIYLE----GGPLIAGFSTLQELRDALVDFKKSGKW 128 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 I + Y ++ +N I V G+ Q Y+K K G+ + K Sbjct: 129 IVAYADTYTQGCYYVASVANHIYLNPQGQVDWHGLASQPYYIKDLAAKFGIKYQVAKVGT 188 Query: 160 MKAEPSPFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K+ F+E +Q ++ + + VSESR I +D + + Sbjct: 189 FKSATEMFTETKMSDANRLQVSMYLNGLWTNVCKAVSESRKISIPTLNTYADEYQFFA-D 247 Query: 218 AKKV---GLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 A+ + +D + ++V + L + D+SI ++ Sbjct: 248 AQSLVRKRFVDKLLYADQVKGEVKKLLRIDADKSINQV 285 >gi|169632699|ref|YP_001706435.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii SDF] gi|169795044|ref|YP_001712837.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii AYE] gi|213158294|ref|YP_002320345.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB0057] gi|215482593|ref|YP_002324785.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB307-0294] gi|301348285|ref|ZP_07229026.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB056] gi|301512406|ref|ZP_07237643.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB058] gi|301596270|ref|ZP_07241278.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB059] gi|169147971|emb|CAM85834.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii AYE] gi|169151491|emb|CAP00252.1| putative protease; signal peptide peptidase sppA [Acinetobacter baumannii] gi|213057454|gb|ACJ42356.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB0057] gi|213987631|gb|ACJ57930.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii AB307-0294] gi|323519116|gb|ADX93497.1| periplasmic serine protease (ClpP class) [Acinetobacter baumannii TCDC-AB0715] Length = 338 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDASSNQAVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 104 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 NPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKTNDPAIFSGLFWTGEQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + + K+Q Sbjct: 284 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQDAKLQ 338 >gi|254882872|ref|ZP_05255582.1| protease IV [Bacteroides sp. 4_3_47FAA] gi|319639672|ref|ZP_07994407.1| protease IV [Bacteroides sp. 3_1_40A] gi|254835665|gb|EET15974.1| protease IV [Bacteroides sp. 4_3_47FAA] gi|317388703|gb|EFV69547.1| protease IV [Bacteroides sp. 3_1_40A] Length = 593 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + +A G+I D+ Q++ + + ++ +D A+++ ++SPGGSA Sbjct: 300 DKSGNIIAVYYAYGEILDAPGSSTEDCIDVQKMCKDLRKLRDNDDVKAVVLRVNSPGGSA 359 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYP 139 Y + I+R + ++K +KPVI + + AAS GY ISCA+N I A T+L GSIG+ Y Sbjct: 360 YGSDQIWREVVRLKEKKPVIVSMGDYAASGGYYISCAANRIFADPTTLTGSIGIFGMMYS 419 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 K F + LG++ VK++ M + +N ++MQ+ V+ Y FV + Sbjct: 420 GEKLFTETLGLNFDVVKTNKMADLGASLGPVLTRPLNASEQELMQNYVNRGYKLFVNRCA 479 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + +++GR+WTGA AK +GL+D +GG ++ + ++ I P Sbjct: 480 EGRKMSTEAIEKVAEGRVWTGAMAKDLGLVDELGGIDKALNAAATQAGIENYSIIGY--P 537 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 K F L + I + A+ Sbjct: 538 EKENIFASLLGNQKKHYINSEIKEYLGSYYNSFKAL 573 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 33/266 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QE 52 + +L ++TL + S + + + +G + + + Sbjct: 22 FTILGIITLVGIVASSDTETVVKDNSIFVLDFKGSLSERVQENPLQQLLGEEFEAYGLDD 81 Query: 53 LIERIERISRDDSATALIV---SLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 ++ I++ +D + + L ++YA E I A+ K I + A Sbjct: 82 ILASIKKAKDNDKIKGIYIQPSYLE----ASYASLEEIRNALLDFKESGKFIVAYADQYA 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ I+ +G G Q + K + KLG+ ++ + K+ PF Sbjct: 138 QGMYYLSSVADKIIINPQGSIGWHGAGMQPVFFKNLVSKLGLEVQVFRVGTYKSAVEPFI 197 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV---GL 223 +E++P + M + ++S +H + VS+SR IP D +D R +A++ L Sbjct: 198 ATEMSPANRKQMTECLESVWHRILADVSDSRRIPTDTLNAYAD-RYMDFCQAEEYIQCKL 256 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKI 249 D + ++EV L L K+ Sbjct: 257 ADTLMYKDEVISYLKQLSGRDEDDKL 282 >gi|193078090|gb|ABO13025.2| putative protease; putative signal peptide peptidase sppA [Acinetobacter baumannii ATCC 17978] Length = 365 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S +S H+A + I G I+ +S++ Sbjct: 71 IFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDASSNQAVNSEDT 130 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 131 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 190 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 191 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 250 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 251 NPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 310 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + + K+Q Sbjct: 311 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQDAKLQ 365 >gi|322513703|ref|ZP_08066797.1| signal peptide peptidase SppA [Actinobacillus ureae ATCC 25976] gi|322120487|gb|EFX92397.1| signal peptide peptidase SppA [Actinobacillus ureae ATCC 25976] Length = 618 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 76/282 (26%), Positives = 140/282 (49%), Gaps = 17/282 (6%) Query: 22 VVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSAT 67 + YF ++ + D +A I + GQI S +++++ + D + Sbjct: 305 IDYFDYAHGLTDRFHVKAENKIAIINVEGQIVSGKSSQNSAGSDTIVKQLRKAREDKNVR 364 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +I+ ++SPGGSA A E I + ++ ++ KPV+T + MAAS GY IS S+ I+A+ T Sbjct: 365 GVILRVNSPGGSAMASEIIRQELEAIQLAGKPVVTSMGGMAASGGYWISATSDKIIASPT 424 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Y Sbjct: 425 TITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENGY 483 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQS 245 F+ LVS RNIP ++ G++W+G +A K GL+D +G + + + L + Sbjct: 484 DRFLELVSRGRNIPKQAVDKIAQGQVWSGEDALKHGLVDELGDFDTAYDVITELVNQQRK 543 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 ++ + WF D + +SS L+ + ++ + GL Sbjct: 544 VKGEAAIEHFRAQWFIDSDDSLLSSFLKGSNLKLQLGSLLGL 585 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 46/244 (18%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPH----------VARIAIRGQIED---- 49 + + I+ + L + ++ F+ ++ ++ S H ++ + G + D Sbjct: 11 IFRCIREFVLSLLFIIFVLICFALTTLLQQESKHQNQQPFFEKGALQLNLDGYLADNHDE 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSSP---GGSAYAGEA 85 + ++ I + +D+ T L++ L GG + + Sbjct: 71 YGDLHRLIQNELGNNEPIKISTFDVARSINKAMKDERITGLVLDL--GYFQGGDVASLQF 128 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKP 143 I I+ K KPVI + + S Y ++ ++ I + V I Y K Sbjct: 129 IGAQIEYFKQSGKPVIAIGEQYSQS-QYYLASFADKIYLNKAGFV-DIHAFSYSNIYFKT 186 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 LDK+ + K+ PF +++P+A Q Q + S ++ + ++ +R I Sbjct: 187 LLDKIEAVPHIFRVGTYKSAVEPFIRDDMSPEAKQNAQTWLTSIWNNVRQDIARNRQIQP 246 Query: 202 DKTL 205 ++ L Sbjct: 247 EQVL 250 >gi|117623937|ref|YP_852850.1| protease 4 [Escherichia coli APEC O1] gi|218558634|ref|YP_002391547.1| protease 4 [Escherichia coli S88] gi|237705717|ref|ZP_04536198.1| protease IV [Escherichia sp. 3_2_53FAA] gi|115513061|gb|ABJ01136.1| protease IV [Escherichia coli APEC O1] gi|218365403|emb|CAR03126.1| protease IV (signal peptide peptidase) [Escherichia coli S88] gi|226900474|gb|EEH86733.1| protease IV [Escherichia sp. 3_2_53FAA] gi|315286440|gb|EFU45875.1| signal peptide peptidase SppA [Escherichia coli MS 110-3] gi|323952272|gb|EGB48145.1| signal peptide peptidase SppA [Escherichia coli H252] gi|323956534|gb|EGB52275.1| signal peptide peptidase SppA [Escherichia coli H263] Length = 618 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 98.7 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAARETDSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|53804454|ref|YP_113935.1| signal peptide peptidase SppA [Methylococcus capsulatus str. Bath] gi|53758215|gb|AAU92506.1| putative signal peptide peptidase SppA [Methylococcus capsulatus str. Bath] Length = 327 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 18/274 (6%) Query: 8 IKTRYVMLSLVTLTVVY----FSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + R +++ + L +V + H A + + G I D+ +IE + Sbjct: 44 LAFRAFLVAAIGLGLVLAFKPLAHDGLTASGKSHTAVVDVTGTIAEGGETDADTIIEGLR 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + +++ +++PGGS ++ I+++K P V V ++ AS GY I+ Sbjct: 104 EAAEAKGVKGIVLRMNTPGGSPVQSAYVYDEIRRIKKEHPALPVYAVVTDVCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I S+VGSIGV+ L+KLGV + + + KA PF V+P Sbjct: 164 SATDRIFVNPASIVGSIGVIMNGFGFVGTLEKLGVERRVMTAGDHKAILDPFGPVDPVEK 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q +Q ++++ + F+ V R + G +WTGAE ++GL+D VG EV + Sbjct: 224 QHVQRLLNTVHQQFIAAVKAGRGDRLKDRPEIFSGLVWTGAEGIELGLVDAVGELHEVAE 283 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 ++ ++I +++ + ++ L S Sbjct: 284 TVIG------AKEIVNYSHRETLLDRVVRQLGTS 311 >gi|82543829|ref|YP_407776.1| protease 4 [Shigella boydii Sb227] gi|81245240|gb|ABB65948.1| protease IV [Shigella boydii Sb227] Length = 618 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 95.2 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QWQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|126642643|ref|YP_001085627.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter baumannii ATCC 17978] Length = 338 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDASSNQAVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 104 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 NPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + + K+Q Sbjct: 284 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQDAKLQ 338 >gi|254445955|ref|ZP_05059431.1| signal peptide peptidase SppA, 67K type [Verrucomicrobiae bacterium DG1235] gi|198260263|gb|EDY84571.1| signal peptide peptidase SppA, 67K type [Verrucomicrobiae bacterium DG1235] Length = 598 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 14/269 (5%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 + VA I G I + + L I + +DD A+++ ++SPGGSA A Sbjct: 309 SSDGFVAVIYAEGTIVNGEGNEGQVGGSGLARVIRKARQDDRVKAIVLRVNSPGGSALAS 368 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R ++ K + PV+ + +AAS GY IS ++ I A +L GSIGV+ + + Sbjct: 369 EVIQREMRLAKEKMPVVVSMGSVAASGGYWISAYADRIFAQPNTLTGSIGVIGVFFNYEE 428 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 GV+ +VK++ + F + + ++Q VD Y F+ V+E R + + Sbjct: 429 LAATHGVNFDTVKTTEHADLMAQFRPKTEREMSLVQRHVDVIYDSFLAKVAEGRGLELEA 488 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 +++GRIW+GA+A ++GL+D +GG E + + +N+ L Sbjct: 489 VAEIAEGRIWSGADALELGLVDELGGLGEAIAYAGEQADLGEGPAVMELPEARNFLQDLL 548 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +S E ++ L ++ Sbjct: 549 SGVS-----EQAADAKANLALRPLVDLYR 572 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 92/210 (43%), Gaps = 10/210 (4%) Query: 51 QELIERIERISRDDSATALIV----SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHE 105 + L I + DD L++ ++ G A + + A++ KPV V Sbjct: 85 RTLTRGIRAAASDDRIEGLLLTGSFAVEGYGSGFAALKEVHEAVEVFSESGKPVWAYVVY 144 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A Y+IS A++ I +V G+ YPY+ F+ K GV ++ ++ KA Sbjct: 145 PTARDMYVIS-AADTIYMNPEGVVSDTGMSMSYPYLGGFMKKYGVGVQVTRAGDYKAAAE 203 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVG 222 F ++ + + V++ + ++ +++ I + L++ + T +A+++G Sbjct: 204 SFVLEGMSEPSREANAAVLEDFWSEYLSVIANGAGIEAAEYERMLNELGMLTAVDAERLG 263 Query: 223 LIDVVGGQEEVWQSLYAL-GVDQSIRKIKD 251 L+D + +E+ +L + GVD+ + Sbjct: 264 LVDELMFTDELIAALRKVSGVDEESNSFRQ 293 >gi|306814983|ref|ZP_07449139.1| protease 4 [Escherichia coli NC101] gi|305851631|gb|EFM52084.1| protease 4 [Escherichia coli NC101] Length = 618 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVANARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|90021269|ref|YP_527096.1| putative peptidase [Saccharophagus degradans 2-40] gi|89950869|gb|ABD80884.1| peptidase S49 [Saccharophagus degradans 2-40] Length = 329 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 14/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIE 58 ++ K T + ++ L V S V H A + +RG I +E + + Sbjct: 43 IVFKTLTFAYLFVVLMLFVAGAQQSGVVNVTEDHTAVVMVRGAIAGDKEASAPRINAALR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 ++ A A++++++SPGGS ++ I ++K K V + ++ AS Y IS Sbjct: 103 AAFENEHAKAIVLAVNSPGGSPVQSAYVYDEIMRLKKEYPDKKVYAVIEDIGASGAYYIS 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A +SLVGSIGV+ ++KLGV + S KA PFS N + Sbjct: 163 AAADEIYANRSSLVGSIGVIASGFGFTGTMEKLGVERRVYTSGENKAFLDPFSPANEQHE 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + V+ + F+ V R + G IW G A ++GLID +G +V + Sbjct: 223 EFWEGVLAEVHVQFMDAVKAGRGDRLKDNDTVFSGLIWNGERALEMGLIDGLGSARDVAR 282 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + K+ D+ K+ + + +S Sbjct: 283 DVI------KHEKLVDYTRRKSPLQELMNSFGVS 310 >gi|33240745|ref|NP_875687.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238273|gb|AAQ00340.1| Periplasmic serine protease (ClpP class) [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 269 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 4/259 (1%) Query: 33 DNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I G I S +++ + ++ D AL++ + SPGG+ + I A+ Sbjct: 8 KSKKRMARIIIDGPINGSTRKLVLKALRQV-EDREFPALLLRIDSPGGTVGDSQEIHAAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + ++ ++AS G + A+ I+A ++ GSIGV+ + + L+K+G Sbjct: 67 LRLREKGCHIVASFGNISASGGVYVGVAAEKIIANPGTITGSIGVILRGNNLSKLLEKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + +++KS K SP ++P+ ++Q ++DSSY FV V+E R + + +D Sbjct: 127 IKFETIKSGLYKDILSPDRALSPEERSLLQSLIDSSYEQFVTAVAEGRKLNKEDVKSFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR++TG +AK++GLID G + + L + PK L + Sbjct: 187 GRVFTGTQAKQLGLIDDTGDENDARLLAAELADLDQKVRPITLGRPKKKLIGLLPGGKMF 246 Query: 270 SLLEDTIPLMKQTKVQGLW 288 S L +TI + T Q LW Sbjct: 247 SKLLETISMELSTSGQILW 265 >gi|325123108|gb|ADY82631.1| putative protease [Acinetobacter calcoaceticus PHEA-2] Length = 338 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWS---SHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S S V +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTSKEGSAVSSSSAHLAVVDIIGTIDASSNQAVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K + P V + +M AS Sbjct: 104 NKALKRAFEASNSKAVALNINSPGGSPVQSDEIWQEIRYLKKQHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +P Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 DPAQKQHIQSVLDNVHTHFITAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + K+Q Sbjct: 284 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGAEMGKGLSESIAQRLETSQNAKLQ 338 >gi|297569510|ref|YP_003690854.1| signal peptide peptidase SppA, 36K type [Desulfurivibrio alkaliphilus AHT2] gi|296925425|gb|ADH86235.1| signal peptide peptidase SppA, 36K type [Desulfurivibrio alkaliphilus AHT2] Length = 308 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 125/245 (51%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 + +S + +++ S + + V I +RG I + +LIE++ R D A++ Sbjct: 27 FWAGVSFLIGSLLSDSPLARTARHPEGVGVIEVRGVISSADQLIEQLTDFRRKDKIKAIV 86 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG+ A + +F +++ KPV+ + +AAS G + + I+A +L G Sbjct: 87 LRIDSPGGAVGASQELFEEVKRTNRVKPVVASMGSVAASGGLYAALGAERIIANPGTLTG 146 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ ++ ++ L K+G +++KS +K + + P +M+ ++V + + FV Sbjct: 147 SIGVIIKFANLEELLQKIGYRSETIKSGELKDTGAMDRPLTPGEREMLAEMVHAVHRQFV 206 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 V+ SR++P + +DGRI++GA A ++ L+D +G + +LG + Sbjct: 207 DDVAASRDLPVGQVEAFADGRIFSGARALELQLVDALGNLNDAAMLAASLGGLDGEQVPH 266 Query: 251 DWNPP 255 PP Sbjct: 267 LIYPP 271 >gi|218689707|ref|YP_002397919.1| protease 4 [Escherichia coli ED1a] gi|218427271|emb|CAR08161.2| protease IV (signal peptide peptidase) [Escherichia coli ED1a] Length = 618 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|320184010|gb|EFW58833.1| Protease IV [Shigella flexneri CDC 796-83] gi|332096360|gb|EGJ01361.1| signal peptide peptidase SppA, 67K type [Shigella boydii 3594-74] Length = 618 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|282899429|ref|ZP_06307396.1| Peptidase S49, protease IV [Cylindrospermopsis raciborskii CS-505] gi|281195693|gb|EFA70623.1| Peptidase S49, protease IV [Cylindrospermopsis raciborskii CS-505] Length = 607 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 9/230 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 +++ +A + G+I D + + + +I +D ++++ ++SPGGSA A Sbjct: 311 QNSQNKIAVVYAEGEIVDGEGESSQIGGDRYAKVLRKIRQDQDIKSVVLRINSPGGSATA 370 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R IQ K KPVI + ++AAS GY I+ S+ I A +L GSIGV + Sbjct: 371 SEIIEREIQLTKQVKPVIVSMGDVAASGGYWIASNSDHIFAEPGTLTGSIGVFGVLLNGQ 430 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ +VK+S + +P+ + + Q V+ Y+ F+ V + R +P Sbjct: 431 KLANNNGITWDTVKTSEFADSQTVSRPKSPQELAIYQRSVNRIYNMFINKVVQGRKLPET 490 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 K ++ GR+W+GA AK++GL+D +GG + +++++ Sbjct: 491 KVGEIAQGRVWSGATAKQIGLVDEIGGLNIAIEYAAKKAKLGKDWQVEEY 540 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 13/208 (6%) Query: 51 QELIERIERISRDDSATALIVSL-SSPGGSAYAGE---AIFRAIQKVKNR-KPVITEVHE 105 ++LI +E+ + D + + + S S+ I +A++K + K +I Sbjct: 87 RQLIGALEQAAEDQRIAGIYIDVSESSKVSSLGYASLREIRQALEKFRASGKKIIAY--G 144 Query: 106 MAASA-GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + S Y +S ++ I ++ G+ Q ++ L+K G+ ++ V+ K Sbjct: 145 VGWSEREYYLSSVADKIFLNPVGMMEINGLSSQPIFLTGALEKYGIGVQVVRVGKFKGAV 204 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--DGRIWTGAEAKK 220 P +++P+ + Q ++D + + V +SR I + ++ G + +AK Sbjct: 205 EPLVLDKLSPENREQTQQLLDDLWGEWRNSVGKSRKISPEILQEIANNQG-VLEAKDAKN 263 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRK 248 GLID V ++V L +G + K Sbjct: 264 NGLIDEVAYTDQVVADLKKIGTSDNDGK 291 >gi|217420954|ref|ZP_03452459.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 576] gi|254184191|ref|ZP_04890781.1| peptidase, U7 family protein [Burkholderia pseudomallei 1655] gi|184214722|gb|EDU11765.1| peptidase, U7 family protein [Burkholderia pseudomallei 1655] gi|217396366|gb|EEC36383.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 576] Length = 333 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLVTLTVVYF---SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ + F S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLAVLGVLAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 287 Query: 236 SLYA 239 + Sbjct: 288 DVLK 291 >gi|332702712|ref|ZP_08422800.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] gi|332552861|gb|EGJ49905.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] Length = 305 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 129/262 (49%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 + F E + + + G I S++L+ I + RDDS +++ + SPGG Sbjct: 34 AMAAFHLLPTGEFAGARLGVVRVEGLIVGSEDLVGWIGELERDDSIKGVLLRIDSPGGVV 93 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++ A+ ++ RKPVI + +AAS GY I+ A+ I+A ++L GSIGV + Sbjct: 94 APSQEVYAAVLRLAERKPVIASMGAVAASGGYYIAAAAQEIMANPSTLTGSIGVRMELLN 153 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 ++ +K+G+S + S MK +PF E++P+ + + VV + FV ++++R + Sbjct: 154 IRALAEKVGLSQTLITSGEMKGAGTPFREMSPREREYLTAVVMDMHDQFVSDIAQARGME 213 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ L+DGR +TG +A +GL+D +GG E+ L + + + Sbjct: 214 REQVAALADGRAFTGRQAHGLGLVDHLGGMEDAMDLLRERCGLTGETPVLEGPIEEKSLL 273 Query: 261 CDLKNLSISSLLEDTIPLMKQT 282 + + +I + + + M Sbjct: 274 LRVLSAAIIEPVSEAVSEMTSA 295 >gi|300704627|ref|YP_003746230.1| peptidase s49 [Ralstonia solanacearum CFBP2957] gi|299072291|emb|CBJ43624.1| Peptidase S49 [Ralstonia solanacearum CFBP2957] Length = 350 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 15/291 (5%) Query: 7 KIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 +I R+V L ++ + F S+ + H A +A+ G+I ++ + +E Sbjct: 64 RIFFRFVTLGILGGLLYLFASFEGETVGSGRHTAVVALDGEIAANTNASAENINASLEAA 123 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 DD+ +I+ ++SPGGS I I++++ + P+ V EM AS GY ++ A Sbjct: 124 FADDNTAGVILKINSPGGSPVQAGMINDDIRRLRAKHKDIPLYVVVEEMCASGGYYVAAA 183 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DK+GV + + + K PFS V P+ Q Sbjct: 184 ADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVERRLLTAGANKGMLDPFSPVPPQQRQF 243 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R L G WTG++A ++GL D VG + V +++ Sbjct: 244 AQAMLDEVHQQFIDVVKQGRGSRLKDDPQLFSGLFWTGSKAVELGLADGVGSADFVARNV 303 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + D+ +N+ + + L +++ L Sbjct: 304 I------KAPDMVDYTVKENFAERVARKFGTAMGAGAIKALAATGQLKLLM 348 >gi|78355555|ref|YP_387004.1| signal peptide peptidase A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217960|gb|ABB37309.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 280 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 7/257 (2%) Query: 14 MLSLVTLTVVYFS-------WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 ML LV + + + + + + I ++G + D+ ++ E + RD Sbjct: 2 MLILVAVALFWGAMATLRLLFGDEDFSGGQRLGLINVQGMLLDTTPYVDFAEELRRDPDV 61 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ ++SPGG+ + + A++++ KPV+ + AAS GY IS + IVA + Sbjct: 62 RGVLLRVNSPGGAVAPSQELHDAVKRLATSKPVVVSMGAAAASGGYYISVPATRIVANPS 121 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L SIGV + V + LG+ ++ S +K SPF+E+ P+ + +Q VV Y Sbjct: 122 TLTASIGVKMEMGNVHELMKALGIHHVALTSGELKNAGSPFAEMTPREREYLQSVVMDMY 181 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV+ V+E R++P + +++DGR TG +A + GL+D++G + Q L L Sbjct: 182 DQFVQAVAEGRHLPPEDVRLVADGRAMTGRQALQAGLVDMLGDRHTAMQELLRLCNATGE 241 Query: 247 RKIKDWNPPKNYWFCDL 263 ++ K +L Sbjct: 242 LPVQAGPEEKRSILREL 258 >gi|289192538|ref|YP_003458479.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus sp. FS406-22] gi|288938988|gb|ADC69743.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus sp. FS406-22] Length = 314 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 142/264 (53%), Gaps = 16/264 (6%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE---------------DSQELIERIER 59 + + L V+ S + +A++ + +I D++ I +++ Sbjct: 19 VGVSILLVISLSGENIDLFGGEKIAKVYLCNEIYFDYNQDDSLFPETKKDARYYINLLDK 78 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + +DDS +++ ++SPGG A E + R ++++ +KPV+ V + AS Y++S ++ Sbjct: 79 LEKDDSVKGVLLIVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLDASGAYMVSAPAD 138 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA + S+VGSIGV + + KLG+++ ++K+ K SPF + + + +Q Sbjct: 139 YIVAEKHSIVGSIGVRMDLIHYYGLMKKLGINVTTIKAGKYKDIGSPFRPMTKEEKEYLQ 198 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +++ +Y FV+ V+E R++ + TL ++DG+I+TG +AKKVGL+D VG +E + L Sbjct: 199 KMINETYMDFVKWVAEHRHLSINYTLKIADGKIYTGEDAKKVGLVDEVGTEETALKKLEE 258 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDL 263 L + S +I ++ +N L Sbjct: 259 LA-NVSNPEIVEYGLEENRGLFGL 281 >gi|299822749|ref|ZP_07054635.1| signal peptide peptidase SppA [Listeria grayi DSM 20601] gi|299816278|gb|EFI83516.1| signal peptide peptidase SppA [Listeria grayi DSM 20601] Length = 338 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 137/271 (50%), Gaps = 19/271 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 D +A +++ G I+D+ E + ++++I D S +++ ++SPG Sbjct: 58 GDGDARIAVLSVDGTIQDTGEASSLFGSSGYNHAAFMRQLKQIEADKSVKGILMYVNSPG 117 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I + ++K ++ PV + MAAS GY IS A++ I A++ +L GS+GV+ Sbjct: 118 GGVMESAQIRDKLLEIKKKRKLPVYVSMGSMAASGGYYISTAADKIFASKETLTGSLGVI 177 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q + K+G+S ++KS K S + + ++MQ +++ SY FV +++ Sbjct: 178 MQGYDYSGLMKKVGISDNTIKSGAHKDIMSSSRPMTKEEKKIMQQMINDSYDEFVNVIAT 237 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R++ +K ++DGR++ G +AKK+GLID G +E+ + AL ++ ++ + Sbjct: 238 GRHMSKEKVRKIADGRVYDGRQAKKIGLIDQFGYKEDAIR---ALKKEKGLQDADVFEYQ 294 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + L + S+ ++ L+ K+ G Sbjct: 295 QTGGIESLFSASVKGIVSPNAELLSFLKMSG 325 >gi|191171758|ref|ZP_03033305.1| protease 4 [Escherichia coli F11] gi|227885806|ref|ZP_04003611.1| S49 family peptidase IV [Escherichia coli 83972] gi|190908088|gb|EDV67680.1| protease 4 [Escherichia coli F11] gi|227837379|gb|EEJ47845.1| S49 family peptidase IV [Escherichia coli 83972] Length = 622 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 319 >gi|74311916|ref|YP_310335.1| protease 4 [Shigella sonnei Ss046] gi|73855393|gb|AAZ88100.1| protease IV, a signal peptide peptidase [Shigella sonnei Ss046] Length = 618 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|26248024|ref|NP_754064.1| protease 4 [Escherichia coli CFT073] gi|91210983|ref|YP_540969.1| protease 4 [Escherichia coli UTI89] gi|110641888|ref|YP_669618.1| protease 4 [Escherichia coli 536] gi|215486982|ref|YP_002329413.1| protease 4 [Escherichia coli O127:H6 str. E2348/69] gi|218699668|ref|YP_002407297.1| protease 4 [Escherichia coli IAI39] gi|300938898|ref|ZP_07153600.1| signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300975717|ref|ZP_07173137.1| signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|300994367|ref|ZP_07180872.1| signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|301050891|ref|ZP_07197742.1| signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|312966966|ref|ZP_07781184.1| signal peptide peptidase SppA, 67K type [Escherichia coli 2362-75] gi|331657804|ref|ZP_08358766.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA206] gi|26108427|gb|AAN80629.1|AE016761_204 Protease IV [Escherichia coli CFT073] gi|91072557|gb|ABE07438.1| protease IV, a signal peptide peptidase [Escherichia coli UTI89] gi|110343480|gb|ABG69717.1| protease IV [Escherichia coli 536] gi|215265054|emb|CAS09441.1| protease IV (signal peptide peptidase) [Escherichia coli O127:H6 str. E2348/69] gi|218369654|emb|CAR17423.1| protease IV (signal peptide peptidase) [Escherichia coli IAI39] gi|294489545|gb|ADE88301.1| protease 4 [Escherichia coli IHE3034] gi|300297410|gb|EFJ53795.1| signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|300308679|gb|EFJ63199.1| signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|300406213|gb|EFJ89751.1| signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|300456158|gb|EFK19651.1| signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|307553787|gb|ADN46562.1| protease IV [Escherichia coli ABU 83972] gi|307626750|gb|ADN71054.1| protease 4 [Escherichia coli UM146] gi|312288430|gb|EFR16332.1| signal peptide peptidase SppA, 67K type [Escherichia coli 2362-75] gi|315290471|gb|EFU49846.1| signal peptide peptidase SppA [Escherichia coli MS 153-1] gi|315299847|gb|EFU59087.1| signal peptide peptidase SppA [Escherichia coli MS 16-3] gi|324007104|gb|EGB76323.1| signal peptide peptidase SppA [Escherichia coli MS 57-2] gi|324011509|gb|EGB80728.1| signal peptide peptidase SppA [Escherichia coli MS 60-1] gi|331056052|gb|EGI28061.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA206] Length = 618 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|238754912|ref|ZP_04616262.1| Protease 4 [Yersinia ruckeri ATCC 29473] gi|238706923|gb|EEP99290.1| Protease 4 [Yersinia ruckeri ATCC 29473] Length = 616 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 22/269 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +A I I G I D +I + A+++ ++SPGGS A E Sbjct: 323 GEEIAVIFINGAIMDGPQTPGSVGGDNTAAQIREARLNPKIKAVVLRVNSPGGSVSASEL 382 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + ++ KP++ + MAAS GY +S +N I+A+ ++L GSIG+ + Sbjct: 383 IRSELVALRAANKPLVVSMGGMAASGGYWVSTPANYIIASPSTLTGSIGIFGVINTYQDS 442 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ LGV V +SP+ S + P+ Q+MQ +++ Y FV LV+ SR+ ++ Sbjct: 443 LETLGVHTDGVATSPLADV-SVTKNLPPEFSQIMQISIENGYKNFVDLVATSRHKTPEQV 501 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G +W G +AK GL+D +G ++ + L K+K + + WF D Sbjct: 502 DEIAQGHVWLGLDAKNNGLVDQLGDFDDAVKKAAELA------KLKTY---QINWFVDQP 552 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 N + L+ + + + W P Sbjct: 553 NF--ADLILGQMTASVHAMLPSVLQAWLP 579 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 106/300 (35%), Gaps = 48/300 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + FV + I +++ + +Y S + + + G + D+ Sbjct: 19 LNFVREFILNLFLIFLIAIGVGIYLLVQSKPVEPVKGALLVNLSGIVVDTPAVNNKVMQF 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 +++E I + D + + +++SLS G+ + I +A+++ Sbjct: 79 TRELLGASSNRLQENSLFDVVETIRQAKTDKNISGMVLSLSDFSGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 ++ KP+ Y ++ +N I + + G Y K L+KL V+ Sbjct: 139 FRDSGKPIFAVGDSYNQQ-QYYLASFANKIYLSPQGTIDLKGFASNNLYYKSLLEKLKVT 197 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + K+ P +++P A + + + ++ V+ +R + ++ + Sbjct: 198 TNIFRVGTYKSAVEPMIRDDMSPAAREADSRWIGGLWQNYLTAVAANRQLSPEQLFPGA- 256 Query: 210 GRIWTGAEAK---------KVGLIDVVGGQEEVWQSLY------ALGVDQSIRKIKDWNP 254 I +G +A + L+D + + V L D + I D+ P Sbjct: 257 ANIISGLQAVGGDTGKYALEHKLVDQLATRPAVEAELIKTFGWNKRSNDYNAISIYDYRP 316 >gi|312886123|ref|ZP_07745742.1| signal peptide peptidase SppA, 67K type [Mucilaginibacter paludis DSM 18603] gi|311301363|gb|EFQ78413.1| signal peptide peptidase SppA, 67K type [Mucilaginibacter paludis DSM 18603] Length = 589 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 12/252 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGG 78 + + +A + G+I S+++ + ++ +D A+++ ++SPGG Sbjct: 299 DADTTNLDSRIAIVYASGEIAGGNGDDNSIGSEKVSAALRKVRLNDKIKAVVLRVNSPGG 358 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 S+ A + I+R + K KPVI + + AAS GY I+CA++ I A ++ GSIG+ Sbjct: 359 SSLASDVIWREVLLTKKAKPVIVSMGDYAASGGYYIACAADSIYAEPNTITGSIGIFAML 418 Query: 139 PYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P ++ F DKLG++ VK+ + P+ ++Q V+ Y F + V++ R Sbjct: 419 PNMQKFFNDKLGLTFDGVKTGKFADLGDVSRPLTPEERMILQAQVNRGYDTFTKAVADGR 478 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + + GR+WTG++A K+GL+D +G + +S + + + P + Sbjct: 479 HKTQAYINSIGQGRVWTGSQAIKIGLVDKLGNINDAIRSAAKMAKLKDYSVVAY--PEQT 536 Query: 258 YWFCDLKNLSIS 269 F L + Sbjct: 537 SKFKSLGRAFGA 548 Score = 97.9 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 31/274 (11%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------------- 50 I + +++ L+ + V S E S V RIA+ I + Sbjct: 17 ISSFLLVIILIGIVSVATSGDKSTEVASNSVLRIALSSSIAERTPDNPLAELGFLGLNGD 76 Query: 51 -----QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPVITE 102 +++ I + D + + + SS A E I A+ K I Sbjct: 77 KAIGLNDILANIRKAKTDSNIKGIFLDESS---MASGQATTEEIRNALIDFKKSGKFIIA 133 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 E+ + + Y ++ ++ + + G Q + K LDKLG+ ++ +K K+ Sbjct: 134 YSEIYSQSFYYLASVADKVYMNPKGIFEFHGFSSQITFFKGALDKLGIDMQIIKVGTYKS 193 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAK 219 PF +++ + + S Y F+ +S SR I D +++ I +A Sbjct: 194 AVEPFFLDKMSDANRMQVNAYLGSLYDHFLTGISASRKINKDSLANIANNLLIQNPEDAV 253 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 K L+D + ++E+ L + IK N Sbjct: 254 KYKLLDGLKYKDELLDELKDRTGVSKKKDIKSVN 287 >gi|222033518|emb|CAP76259.1| Protease 4 [Escherichia coli LF82] gi|312946365|gb|ADR27192.1| protease 4 [Escherichia coli O83:H1 str. NRG 857C] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSIRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|170683467|ref|YP_001743483.1| protease 4 [Escherichia coli SMS-3-5] gi|170521185|gb|ACB19363.1| protease 4 [Escherichia coli SMS-3-5] Length = 622 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|126668129|ref|ZP_01739091.1| peptidase, putative [Marinobacter sp. ELB17] gi|126627399|gb|EAZ98034.1| peptidase, putative [Marinobacter sp. ELB17] Length = 341 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 14/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K T + +V L H A I + G I + ++ + Sbjct: 57 IFFKFLTFAYLFGIVLLFKFPLGQGLESATGGMHTAVIGVDGPIAADELASADNIVSSLR 116 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 + A A+I+ ++SPGGS ++ I++++ K V + ++ AS Y I+ Sbjct: 117 AAFVEPDAAAVILRINSPGGSPVQSGYVYDEIKRLRTEYPDKKVYAVISDIGASGAYYIA 176 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A SLVGSIGV+ + KLGV + + K PFS P+ V Sbjct: 177 SAADEIYANRASLVGSIGVVAGGFGFTEVMGKLGVERRLYTAGESKGFLDPFSAEKPEEV 236 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q V+++++ F+ V + R + G IW+G +A ++GLID +G V + Sbjct: 237 AFWQSVLENTHGQFIAAVQQGRGDRLADDPRVFSGLIWSGEQALELGLIDGLGSASYVAR 296 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + D++ ++ + L +S Sbjct: 297 QIVG------HENLVDYSRARSPLRNLMDQLGVS 324 >gi|260556527|ref|ZP_05828745.1| periplasmic serine protease [Acinetobacter baumannii ATCC 19606] gi|260409786|gb|EEX03086.1| periplasmic serine protease [Acinetobacter baumannii ATCC 19606] Length = 365 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S +S H+A + I G I+ +S++ Sbjct: 71 IFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDASSNQAVNSEDT 130 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 131 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 190 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 191 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 250 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 251 NPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 310 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + + K+Q Sbjct: 311 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQDAKLQ 365 >gi|301026499|ref|ZP_07189929.1| signal peptide peptidase SppA [Escherichia coli MS 69-1] gi|300395517|gb|EFJ79055.1| signal peptide peptidase SppA [Escherichia coli MS 69-1] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----GR 211 K+ PF +++P A + + + ++ V+ +R IP + + G Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGVLEGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 TG + A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|225010434|ref|ZP_03700905.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-3C] gi|225005263|gb|EEG43214.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-3C] Length = 586 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 10/263 (3%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 + ++A + +G+I Q IE IE + S A+++ ++SPGGSA Sbjct: 298 SSKENIAVVYAQGEILYGQGNADYIGQELTIEGIEAAVENSSVKAIVLRVNSPGGSALVS 357 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ AI+K K KPV+ + ++AAS GY I+ +N I A+ ++ GSIGV P + Sbjct: 358 DLIWHAIEKAKAVKPVVVSMGDVAASGGYYIAAGANKIFASPATITGSIGVFGVLPNMSQ 417 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + GV+ + V + A S F ++ K + ++ +Y F+ VS R + D+ Sbjct: 418 LAKEWGVNAQEVATHDNGATYSVFRPMSEKFKALTVQSIEDTYQTFLSRVSSGRGMTVDQ 477 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L+ GR+WT A GLID +G + LG I+++ K+ + + Sbjct: 478 VDALAQGRVWTAEAALAGGLIDGIGDLDVAIAEAALLGGASDY-GIRNYPKYKSPFEQLI 536 Query: 264 KNLSISSLLEDTIPLMKQTKVQG 286 ++LS S ++ + Q + Sbjct: 537 EDLSGVSTSIKSLASLSQNHLDA 559 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 103/291 (35%), Gaps = 51/291 (17%) Query: 1 MEFVLKKIKTRY-VMLSLVTLTVVYFSWSSHVEDNSPHVAR-------IAIRGQIEDS-- 50 M F+ + +++ ++FS + + D P + +G ++D Sbjct: 1 MAFLRNFFASCLGTLVAFGVAFFMFFSIITALSDMEPQTVIGNKVVLELDFQGSVKDRVV 60 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAY------AGEAIF 87 +++ IE D + + +AY +AI Sbjct: 61 DQSQDPFGAFGNPQMGLDQILLAIEVAKEDSRVQGISIR------NAYFMAGWSQVKAIR 114 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+ K + E Y ++ ++ I T +V G+ + ++K F DK Sbjct: 115 DALSDFKTSGKKVFSYAEFYDQKDYYLASVADSIFLTPTGIVDLKGLSSEVLFLKDFQDK 174 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G+ ++ ++ K+ +P+ +E+ + ++D + + +++ R++ + Sbjct: 175 SGLKMEVIRHGKYKSAVAPYLDNEMGVAQKTQLTALLDGLWQVMAQDMAQDRSMTLAQLN 234 Query: 206 VLSDGRIWTGA----EAKKVGLIDVVGGQEE---VWQSLYALGVDQSIRKI 249 GA +A + G ID + ++E + + L + + + Sbjct: 235 GFVTAM---GAGTPLKALENGFIDGLLYEDEYDLALKKAFDLPLPNKPKTV 282 >gi|58580196|ref|YP_199212.1| protease IV [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424790|gb|AAW73827.1| protease IV [Xanthomonas oryzae pv. oryzae KACC10331] Length = 642 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 11/255 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 340 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 399 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 400 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 459 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 460 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 519 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 520 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 579 Query: 262 DLKNLSISSLLEDTI 276 + + S + + Sbjct: 580 FMNGFAGSRMGAWML 594 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 22/215 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 108 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 166 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 167 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 222 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 223 AEPYILDAASADAKEADLFWMNDVWQRYLADVVTARKLSPAQLTAGIDTLPEGVAAAGGD 282 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 A + L+D + +EEV L GV S + Sbjct: 283 LAKFALQQKLVDGLKTREEVDALLVKRGVADSDAE 317 >gi|115522478|ref|YP_779389.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisA53] gi|115516425|gb|ABJ04409.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rhodopseudomonas palustris BisA53] Length = 324 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 88/278 (31%), Positives = 153/278 (55%), Gaps = 11/278 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 S + + +S +AR+ I G I Q+ +E ER+ + SA A++V ++SPGG+ E Sbjct: 43 SGTMSLAGSSGSIARVKIDGLIRSDQDRVEAFERLEK-SSAAAVVVHINSPGGTTAGSEQ 101 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++ A+ ++K +KP++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP + Sbjct: 102 LYDALMRLKAKKPLVVVVEGLAASGGYIAALASDQIIARQSSLVGSIGVLFQYPNFSELM 161 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +GV ++ VKSSP+KA P+ F +P+A + +V SY WF LV + R + + Sbjct: 162 KTVGVKVEEVKSSPLKASPNGFEPTSPEARAALDSLVKDSYAWFRGLVKDRRQMDDSQLE 221 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY----WFC 261 ++DGR++TG +A + L+D +G ++ L A + ++D+ + Sbjct: 222 KVADGRVFTGRQAVGLKLVDQLGDEKTAVAWLVAQKKVKPDLPVRDYKLEPRLGDLTFLR 281 Query: 262 DLKNLSISSLLEDTIPL------MKQTKVQGLWAVWNP 293 +L +S++ D + Q + G+ A+W P Sbjct: 282 SAASLGLSAVGLDAAAQLLAQAGIDQFALDGMLALWRP 319 >gi|256810518|ref|YP_003127887.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus fervens AG86] gi|256793718|gb|ACV24387.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus fervens AG86] Length = 311 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 125/216 (57%), Gaps = 1/216 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D++ I ++ + +DDS +++ ++SPGG A E + R ++++ N+KPV+ V + A Sbjct: 68 DARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELANKKPVVVYVEGLDA 127 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y++S ++ IVA + S+VGSIGV + + KLGV++ ++K+ K SPF Sbjct: 128 SGAYMVSAPADYIVAEKHSIVGSIGVRMDVMHYYGLMKKLGVNVTTIKAGKYKDIGSPFR 187 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + +Q +++ +Y FV V+E R + + TL ++DG+I++G +AKKVGL+D VG Sbjct: 188 PMTEEEREYLQKMINETYMDFVEWVAEHRGLSINYTLKIADGKIYSGEDAKKVGLVDEVG 247 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 +E + L L + +I ++ +N L Sbjct: 248 TEETALKKLEELANISN-PEIVEYGLEENRGLFGLT 282 >gi|218554334|ref|YP_002387247.1| protease 4 [Escherichia coli IAI1] gi|218361102|emb|CAQ98685.1| protease IV (signal peptide peptidase) [Escherichia coli IAI1] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + S ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGSDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|331647259|ref|ZP_08348353.1| signal peptide peptidase SppA, 67K type [Escherichia coli M605] gi|331044042|gb|EGI16178.1| signal peptide peptidase SppA, 67K type [Escherichia coli M605] Length = 622 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEVQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 98.7 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 107/290 (36%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEFEKTLTKEFGWSKTDKNYRAISYYD 319 >gi|323186946|gb|EFZ72264.1| signal peptide peptidase SppA, 67K type [Escherichia coli RN587/1] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKEDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLAKEFGWSKTDKNYRAISYYD 315 >gi|188493917|ref|ZP_03001187.1| signal peptide peptidase SppA, 67K type [Escherichia coli 53638] gi|188489116|gb|EDU64219.1| signal peptide peptidase SppA, 67K type [Escherichia coli 53638] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDNGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|50085707|ref|YP_047217.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. ADP1] gi|11345441|gb|AAG34712.1|AF320001_5 putative protease [Acinetobacter sp. BD413] gi|49531683|emb|CAG69395.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. ADP1] Length = 338 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 15/261 (5%) Query: 37 HVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 H+A + I G I+ +S++ + +ER ++ A+ ++++SPGGS + I++ I Sbjct: 81 HLAVVNIIGTIDSSNQSVNSEDTNKALERAFEAKNSKAVALNINSPGGSPVQSDEIWQEI 140 Query: 91 QKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +K + P V + +M AS Y I+ A++ I+ +SLVGSIGV+ + K Sbjct: 141 RYLKKQHPDKKVYAVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQK 200 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLV 206 LG+ +++ S K S VNP + +Q V+D+ + F+ V E R Sbjct: 201 LGIEDRTLTSGSNKDILSMTKPVNPAQREHIQSVLDNVHAHFINAVKEGRGTRLKSNDPA 260 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLK 264 + G WTG +A ++G+ D G + + + L V+ + + +P ++ Sbjct: 261 IFSGLFWTGEQAIQLGVADRTGNLDTLMREL---KVENKVNYTIERSPFESILGKMGSEL 317 Query: 265 NLSISSLLEDTIPLMKQTKVQ 285 IS + + +Q K+Q Sbjct: 318 GQGISQSVSQQLKTEQQAKLQ 338 >gi|206559379|ref|YP_002230140.1| family S49 serine peptidase [Burkholderia cenocepacia J2315] gi|206561219|ref|YP_002231984.1| family S49 serine peptidase [Burkholderia cenocepacia J2315] gi|198035417|emb|CAR51293.1| serine peptidase, family S49 [Burkholderia cenocepacia J2315] gi|198037261|emb|CAR53183.1| serine peptidase, family S49 [Burkholderia cenocepacia J2315] Length = 330 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L+ L+ ++ FS S + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLAVFVLLAFALIDFSSDSKFSSSGRHTALVTIDGEIAAGVNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTVGVVLRINSPGGSPVQAGMVYDEIRRLRKKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|332343487|gb|AEE56821.1| signal peptide peptidase SppA [Escherichia coli UMNK88] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 110/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLFPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT----LVLSDGR 211 K+ PF +++P A + + + ++ V+ +R IP ++ L +G Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAPGLLEGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 TG + A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|320194522|gb|EFW69153.1| Protease IV [Escherichia coli WV_060327] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 107/290 (36%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++ A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSSAAREADSRWIGELWKNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|193065780|ref|ZP_03046843.1| protease 4 [Escherichia coli E22] gi|192926552|gb|EDV81183.1| protease 4 [Escherichia coli E22] gi|320197951|gb|EFW72559.1| Protease IV [Escherichia coli EC4100B] Length = 622 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|187733275|ref|YP_001880563.1| protease 4 [Shigella boydii CDC 3083-94] gi|194428542|ref|ZP_03061081.1| protease 4 [Escherichia coli B171] gi|194433484|ref|ZP_03065762.1| protease 4 [Shigella dysenteriae 1012] gi|260844115|ref|YP_003221893.1| protease IV [Escherichia coli O103:H2 str. 12009] gi|260855631|ref|YP_003229522.1| protease IV [Escherichia coli O26:H11 str. 11368] gi|260868291|ref|YP_003234693.1| protease IV [Escherichia coli O111:H- str. 11128] gi|307310662|ref|ZP_07590308.1| signal peptide peptidase SppA, 67K type [Escherichia coli W] gi|187430267|gb|ACD09541.1| protease 4 [Shigella boydii CDC 3083-94] gi|194413420|gb|EDX29703.1| protease 4 [Escherichia coli B171] gi|194418247|gb|EDX34338.1| protease 4 [Shigella dysenteriae 1012] gi|209768378|gb|ACI82501.1| protease IV [Escherichia coli] gi|257754280|dbj|BAI25782.1| protease IV [Escherichia coli O26:H11 str. 11368] gi|257759262|dbj|BAI30759.1| protease IV [Escherichia coli O103:H2 str. 12009] gi|257764647|dbj|BAI36142.1| protease IV [Escherichia coli O111:H- str. 11128] gi|306908840|gb|EFN39336.1| signal peptide peptidase SppA, 67K type [Escherichia coli W] gi|315061069|gb|ADT75396.1| protease IV (signal peptide peptidase) [Escherichia coli W] gi|320176722|gb|EFW51758.1| Protease IV [Shigella dysenteriae CDC 74-1112] gi|320641615|gb|EFX11003.1| protease 4 [Escherichia coli O157:H7 str. G5101] gi|320646975|gb|EFX15808.1| protease 4 [Escherichia coli O157:H- str. 493-89] gi|320652257|gb|EFX20555.1| protease 4 [Escherichia coli O157:H- str. H 2687] gi|320657858|gb|EFX25620.1| protease 4 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320668330|gb|EFX35157.1| protease 4 [Escherichia coli O157:H7 str. LSU-61] gi|323152988|gb|EFZ39257.1| signal peptide peptidase SppA, 67K type [Escherichia coli EPECa14] gi|323158527|gb|EFZ44542.1| signal peptide peptidase SppA, 67K type [Escherichia coli E128010] gi|323166270|gb|EFZ52045.1| signal peptide peptidase SppA, 67K type [Shigella sonnei 53G] gi|323175160|gb|EFZ60774.1| signal peptide peptidase SppA, 67K type [Escherichia coli LT-68] gi|323180545|gb|EFZ66090.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1180] gi|323948173|gb|EGB44162.1| signal peptide peptidase SppA [Escherichia coli H120] gi|324119252|gb|EGC13140.1| signal peptide peptidase SppA [Escherichia coli E1167] gi|332085809|gb|EGI90973.1| signal peptide peptidase SppA, 67K type [Shigella dysenteriae 155-74] Length = 618 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|193068967|ref|ZP_03049926.1| protease 4 [Escherichia coli E110019] gi|192957762|gb|EDV88206.1| protease 4 [Escherichia coli E110019] Length = 622 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|33866416|ref|NP_897975.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 8102] gi|33633194|emb|CAE08399.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 8102] Length = 270 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 132/257 (51%), Gaps = 6/257 (2%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 I + G I S Q +++ I + AL++ + SPGG+ + I A+ +++ + Sbjct: 16 IVVDGPITGSTRQRVLKAIRDVEE-REFPALLLRIDSPGGTVGDSQEIHAALLRLREKGC 74 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G I A+ IVA ++ GSIGV+ + + +++G+ +VKS Sbjct: 75 RVVASFGNISASGGVYIGVAAESIVANPGTITGSIGVILRGNDLSKVFERIGIRFDTVKS 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++P+ ++Q+++DSSY FVR+V+E R++ + +DGR+++G + Sbjct: 135 GVYKDILSPDRPLSPEERALLQELIDSSYGQFVRVVAEGRSLTEETVRGFADGRVFSGEQ 194 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 AK +GL+D +G ++ + L +D++ + P+ L + +LL+ + Sbjct: 195 AKTLGLVDELGDEDHARRLAARLADLDETTTRPVTLGKPRKKLMNLLPGSQLIALLQQRL 254 Query: 277 PLMKQTKVQGLWAVWNP 293 L Q LW ++ P Sbjct: 255 SLELMGSGQVLW-LYRP 270 >gi|91205551|ref|YP_537906.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157827267|ref|YP_001496331.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] gi|91069095|gb|ABE04817.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157802571|gb|ABV79294.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] Length = 307 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 153/295 (51%), Gaps = 14/295 (4%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSH----------VEDNSPHVARIAIRGQIEDSQELIE 55 K+IK R ++ L+ + ++ S+ +N ++A + I I + ++ + Sbjct: 12 KQIKARLLVWKLIAIILIGVSFFLICKDFVPTEVLANNNDDYIASVLIDDIILEDEKRDK 71 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 ++++I D ALIV+++SPGG+ E I+ + K+ +KPV+ + MAAS GYLIS Sbjct: 72 KLKKIVDDSHIKALIVNVNSPGGTVVGSEKIYNILLKISEKKPVVIVMGTMAASGGYLIS 131 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + I++ ++ GSIGV+ Q V KLG++ + KS +KA P+P ++ Sbjct: 132 LAGDYIISHNGTITGSIGVILQTAEVTDLAQKLGITFLNFKSGELKAAPNPTEKLTENVR 191 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + ++ +Y++F+ LV+E R IP D+ L+DGRI++G +A K+ L+D +G ++ + Sbjct: 192 VAVMENIEDTYNFFIELVAERRKIPIDEVKKLADGRIYSGRQAVKLKLVDNIGNEDTALK 251 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 L + IKD+ ++ SL +P + G+ A+ Sbjct: 252 WLQDEKKIDAKLTIKDYQLKPKPKLVEMMLEDFDSL----VPSFFKNSFNGIKAI 302 >gi|17232082|ref|NP_488630.1| protease IV [Nostoc sp. PCC 7120] gi|17133726|dbj|BAB76289.1| protease IV [Nostoc sp. PCC 7120] Length = 609 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 12/252 (4%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 +++ +A + G I D +I +D++ A+++ ++SPGGSA A Sbjct: 311 KNSKNKIAVVYAEGDIVDGKGDDGQIGGDRFARIFNKIRQDENVKAVVLRINSPGGSATA 370 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E + R I+ + KPV+ + + AAS GY I+ SN I A ++ GSIGV + Sbjct: 371 SEVMQREIRLTRESKPVVVSMGDYAASGGYWIATDSNRIFAEPNTITGSIGVFGVLFNGQ 430 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ +VK++ + +P+ + + Q VD Y+ FV V++ R +P Sbjct: 431 KLANDNGITWDAVKTARYADSQTVARPKSPQEIAIYQRSVDRIYNMFVNKVAQGRKLPTQ 490 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQE---EVWQSLYALGVDQSIRKIKDWNPPKNYW 259 K ++ GR+W+G AK++GL+D +GG E LG D +R+ + + + Sbjct: 491 KVAEIAQGRVWSGVTAKQIGLVDEIGGLNAAIEYAAKAAKLGKDWQLREYPRESSFEERF 550 Query: 260 FCDLKNLSISSL 271 F + ++L Sbjct: 551 FGGVVEEISTTL 562 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 112/273 (41%), Gaps = 17/273 (6%) Query: 21 TVVYFSWSSHVEDNSPHVARI---AIRGQIEDS---QELIERIERISRDDSATALIVSLS 74 +VV F S ++ D P G ++ + +I+ +E+ RD A+ + Sbjct: 51 SVVVFDLSMNITDREPSAGEELQNRFSGVTQERMTLRNVIDSLEKAQRDKRIVAIYLD-G 109 Query: 75 SPGGS--AYAG-EAIFRAIQKVKNR-KPVITEVHEMAASAG-YLISCASNIIVAAETSLV 129 S GG+ +A + I +A+++ + K VI +A Y +S ++ I + Sbjct: 110 SRGGNNLGFASLKEIRKALEEFRKSGKKVIAY--GVAWDEKEYYLSSVADTIALNPLGGL 167 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYH 187 G+ Q ++ L K G+ ++ V++ K PF +++P+ + Q ++D + Sbjct: 168 EINGLSSQPMFLAGALQKYGIGVQVVRAGKFKGAVEPFLLDKLSPENREQTQKLLDDVWG 227 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + V SR I K ++D + EAK GL+D V ++V L L Sbjct: 228 EWRTTVGNSRKINPQKLQAIADNQSLLEATEAKTNGLVDQVAYNDQVVADLKKLTGSNKK 287 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 + Y ++L + ++ I ++ Sbjct: 288 DNTFTQISLRRYAQVPGQSLGLEKNSKNKIAVV 320 >gi|159028319|emb|CAO87217.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 273 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 139/268 (51%), Gaps = 9/268 (3%) Query: 33 DNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 +ARI I G I D+++ + + I ++ AL++ + SPGG+ + I+ A++ Sbjct: 8 KTRKQIARIEITGAIASDTRKRVLKALEIVKERQYPALLLRIDSPGGTVGDSQEIYEALK 67 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++ +I ++AS G I +N I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 68 RLQKTTKIIASFGNISASGGVYIGMGANYIMANPGTITGSIGVILRGNNLERLLDKVGVS 127 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K +KS P K S E+ + +++QD++D+SY F++ V+ +RN+ ++ +DGR Sbjct: 128 FKVIKSGPYKDILSFDRELTDEEERILQDMIDTSYQQFLQTVAGARNLDVNQVKSFADGR 187 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKN----- 265 I+TG +A ++G++D +G +E+ L G+ K + PK N Sbjct: 188 IFTGQQALELGVVDRLGTEEDARLWALELAGLPPDKTKCQTIEEPKPLLSRLTGNRSQIP 247 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L + L+ + + Q LW ++ P Sbjct: 248 LGLQKTLQ-RLEFELEVNGQLLW-LYRP 273 >gi|75908676|ref|YP_322972.1| peptidase S49, protease IV [Anabaena variabilis ATCC 29413] gi|75702401|gb|ABA22077.1| Peptidase S49, protease IV [Anabaena variabilis ATCC 29413] Length = 609 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 12/255 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGS 79 ++ +A + G I D +I +D++ A+++ ++SPGGS Sbjct: 308 GVARNSKNKIAVVYAEGDIVDGKGDDGQIGGDRFARIFNKIRQDENVKAVVLRINSPGGS 367 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E + R I+ + KPV+ + + AAS GY I+ SN I A ++ GSIGV Sbjct: 368 ATASEVMQREIRLTRESKPVVVSMGDYAASGGYWIATDSNRIFAEPNTITGSIGVFGVLF 427 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + G++ +VK++ + +P+ + + Q VD Y+ FV V++ R + Sbjct: 428 NGQKLANDNGITWDAVKTARYADSQTVARPKSPQEIAIYQRSVDRIYNMFVNKVAQGRKL 487 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE---EVWQSLYALGVDQSIRKIKDWNPPK 256 P K ++ GR+W+G AK++GL+D +GG E LG D +R+ + + Sbjct: 488 PTQKVAQIAQGRVWSGVTAKQIGLVDEIGGLNAAIEYAAKAAKLGKDWQLREYPRESSFE 547 Query: 257 NYWFCDLKNLSISSL 271 +F + ++L Sbjct: 548 ERFFGGVVEEISTTL 562 Score = 95.6 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 29/279 (10%) Query: 21 TVVYFSWSSHVEDNSPHVARI---AIRGQIEDS---QELIERIERISRDDSATALIVSLS 74 +VV S ++ D P G ++ + +I+ +E+ RD A+ + Sbjct: 51 SVVVLDLSMNITDREPSAGEELQNRFSGVTQERMTLRNVIDSLEKAQRDKRIVAIYLD-G 109 Query: 75 SPGGS--AYAG-EAIFRAIQKVKNR-KPVITEVHEMAASAG-------YLISCASNIIVA 123 S GG+ +A + I +A+++ + K VI G Y +S ++ I Sbjct: 110 SRGGNNLGFASLKEIRKALEEFRKSGKKVIAY--------GVSWNEREYYLSSVADTIAL 161 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDV 181 + G+ Q +V L K G+ ++ V++ K PF ++++P+ + Q + Sbjct: 162 NPLGGLEINGLSSQPMFVAGALQKYGIGVQVVRAGKFKGAVEPFVLNKLSPENREQTQKL 221 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQEEVWQSLYAL 240 +D + + V SR I K ++D + EAK GL+D V ++V L L Sbjct: 222 LDDVWGEWRTTVGNSRKINPQKLQAIADNQSLLEPTEAKTNGLVDQVAYNDQVVADLKKL 281 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 + Y ++L ++ ++ I ++ Sbjct: 282 TGSDKKDNTFTQISLRRYAQVPGQSLGVARNSKNKIAVV 320 >gi|330911571|gb|EGH40081.1| protease 4 [Escherichia coli AA86] Length = 622 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEVQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 319 >gi|323978052|gb|EGB73138.1| signal peptide peptidase SppA [Escherichia coli TW10509] Length = 622 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK-VKLWHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAIGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|281178836|dbj|BAI55166.1| protease IV [Escherichia coli SE15] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEVQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|126438593|ref|YP_001059819.1| peptidase, U7 family protein [Burkholderia pseudomallei 668] gi|126218086|gb|ABN81592.1| peptidase, U7 family protein [Burkholderia pseudomallei 668] Length = 333 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLAVLGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 287 Query: 236 SLYA 239 + Sbjct: 288 DVLK 291 >gi|157161228|ref|YP_001458546.1| protease 4 [Escherichia coli HS] gi|170019887|ref|YP_001724841.1| protease 4 [Escherichia coli ATCC 8739] gi|312969795|ref|ZP_07783978.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1827-70] gi|157066908|gb|ABV06163.1| protease 4 [Escherichia coli HS] gi|169754815|gb|ACA77514.1| signal peptide peptidase SppA, 67K type [Escherichia coli ATCC 8739] gi|310338080|gb|EFQ03169.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1827-70] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|331683273|ref|ZP_08383874.1| signal peptide peptidase SppA, 67K type [Escherichia coli H299] gi|331079488|gb|EGI50685.1| signal peptide peptidase SppA, 67K type [Escherichia coli H299] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADI-SITKALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 315 >gi|320181201|gb|EFW56120.1| Protease IV [Shigella boydii ATCC 9905] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKADRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|320539622|ref|ZP_08039286.1| protease IV (signal peptide peptidase) [Serratia symbiotica str. Tucson] gi|320030234|gb|EFW12249.1| protease IV (signal peptide peptidase) [Serratia symbiotica str. Tucson] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 22/270 (8%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 + +A + G I D + ++ D A+++ ++SPGGS Sbjct: 321 ADTQGDEIAVVFANGAIIDGPQAAGTVGDDTTAAELRQVRLDPIIKAVVLRVNSPGGSVS 380 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + +++ KPV+ + MAAS GY IS ++ I+A+ ++L GSIG+ Sbjct: 381 ASEVIRAELAEIRAAGKPVVVSMGGMAASGGYWISTPADYIIASPSTLTGSIGIFGIINT 440 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD +GV V +SP+ + + P Q+MQ ++ Y F+ LV+++R + Sbjct: 441 YERTLDSIGVHTDGVATSPLADI-TATKALPPAFSQIMQLSIEHGYKNFIDLVAKARKMV 499 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + ++ G +W G++AK GL+D +G ++ + + L K+K W K WF Sbjct: 500 PQQVDQIAQGHVWLGSDAKANGLVDQLGDFDDAVKKVAELA------KLKQW---KLNWF 550 Query: 261 CDLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 D +L+ + S +I M +Q + Sbjct: 551 VDTPSLTEMVLSHFSGSIHAMLPAAIQAIL 580 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 81/204 (39%), Gaps = 21/204 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 EL+ I + D + T +++ L+ GG+ I +A+++ ++ KP+I + + + Sbjct: 99 ELVSSIRKAKDDKTITGMVLQLNDFGGADQPSLHYIGKALREFRDSGKPIIA-IGDSYSQ 157 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ +N I + GS+ G Y K L+ V+ + K+ P Sbjct: 158 MQYYLASYANRIYLSPQ---GSVDLRGFASNNLYYKSLLEMFKVTSHIFRVGTYKSAVEP 214 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE------- 217 +++ A + + + ++ V+ +R + + +D + +G + Sbjct: 215 LIRDDMSLAAREADSRWIGGLWQNYLDTVAANRQLTPQQLFPGAD-NVLSGLQASGGDTA 273 Query: 218 --AKKVGLIDVVGGQEEVWQSLYA 239 A L+D + + + L Sbjct: 274 CYALDNKLVDELASRTAIEDQLVK 297 >gi|284007469|emb|CBA72932.1| protease IV (signal peptide peptidase) [Arsenophonus nasoniae] Length = 626 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 131/265 (49%), Gaps = 16/265 (6%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +D ++A I +G I D S+ + +I + + A+++ ++SPGGS A Sbjct: 333 DDQPSNIAVIIAQGAIIDGPQEPGMVGSETTVAQIRKARLNPDIKAIVLRVNSPGGSVTA 392 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 EAI + ++ KP++ + MAAS GY IS +N I A+ T+L GSIG+ Sbjct: 393 SEAIRNELVAARDANKPIVVSMGGMAASGGYWISTPANYIFASPTTLTGSIGIFGVINTF 452 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD +GV V ++P+ S +N + MMQ ++++ YH F++ V+++R+ Sbjct: 453 EKSLDTIGVYTDGVSTTPLADI-SATKGINKQFSDMMQIIIENGYHTFLKYVAQARHKTP 511 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + ++ GR+W G++A + GLID +G ++ L + DW P+ Sbjct: 512 AEIDKIAQGRVWVGSDALQNGLIDKLGDFDDAVNKAAELAKITAPSL--DWMQPERSLID 569 Query: 262 DL---KNLSISSLLEDTIPLMKQTK 283 L + +++ DT+ L+ K Sbjct: 570 QLILELTSNAEAMMPDTLQLLLPQK 594 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 42/268 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA--RIAIRGQIEDS-------- 50 + F+ + I + + + YF++ S + S + I ++G I D Sbjct: 19 LNFIRRFITSFICLFLIFIAASSYFAYKSEKKSTSQYHGALLIDLQGVIVDQVSIPNPLG 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 +++ I R + DD T +++ L + GS + I +A+ Sbjct: 79 KMSRELLGSSSNRMQENSLFDIVNIIRRATYDDKITGIVLQLDNLIGSDQPSLQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K KP+ + S Y ++ +N I ++ VG G Y K LD L Sbjct: 139 TEFKQAGKPIYAVGNGYNQS-QYYLASFANNIYMSQQGNVGIYGFSTNKLYYKTLLDNLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF ++ +A + + + S + ++ ++++R Sbjct: 198 VNSHIFRIGTYKSAVEPFIRDNMSAEAREADKVWIGSLWQHYLSTIAQNRQTTAGNIFPG 257 Query: 208 SDGRIW--------TGAEAKKVGLIDVV 227 +D I + A K LID + Sbjct: 258 ADKLIEEMKSVNGDSAQYAIKQKLIDHI 285 >gi|166713751|ref|ZP_02244958.1| protease IV [Xanthomonas oryzae pv. oryzicola BLS256] Length = 633 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 11/255 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q +++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQALINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTI 276 + + S + + Sbjct: 571 FMSGFAGSRMGAWML 585 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAREADLFWMNDVWQRYLADVGTARKLSPAQLTAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVKRGVADS 305 >gi|121598392|ref|YP_993790.1| peptidase, U7 family protein [Burkholderia mallei SAVP1] gi|251767265|ref|ZP_04820039.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei PRL-20] gi|121227202|gb|ABM49720.1| peptidase, U7 family protein [Burkholderia mallei SAVP1] gi|243063309|gb|EES45495.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei PRL-20] Length = 333 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 11/245 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLAVLGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 287 Query: 236 SLYAL 240 + + Sbjct: 288 DVLKV 292 >gi|124386100|ref|YP_001028745.1| peptidase, U7 family protein [Burkholderia mallei NCTC 10229] gi|124294120|gb|ABN03389.1| peptidase, U7 family [Burkholderia mallei NCTC 10229] Length = 333 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLAVLGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 287 Query: 236 SLYA 239 + Sbjct: 288 DVLK 291 >gi|331663248|ref|ZP_08364158.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA143] gi|331059047|gb|EGI31024.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA143] Length = 622 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADI-SITKALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 98.7 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAIGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKTLTKEFGWSKTDKNYRAISYYD 319 >gi|330878257|gb|EGH12406.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 332 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 20/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T V V + + ++ S H A I ++G I D ++ + + Sbjct: 48 IFFKLLT--VAFLFVAIVLPMLNFEGGASRRSSHTALIDVQGVIADKESASAENITTALR 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 DAFGDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRAEKPNIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGAMEKLGVDRRTYTSGEHKAFLDPFQPQKADET 225 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + G IWTG + +GL+D +G V Sbjct: 226 QFWQSVLDTTHRQFIASVKQGRGDRLKDKDHPEMFSGLIWTGEQGVALGLVDGLGSASYV 285 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + I ++ ++ + K L S + + I ++ L Sbjct: 286 AREVI------KEKDIVEYTVEESPFDRFSKKLGTS--IAERIAMLVGFGGPSL 331 >gi|166364670|ref|YP_001656943.1| protease [Microcystis aeruginosa NIES-843] gi|166087043|dbj|BAG01751.1| protease [Microcystis aeruginosa NIES-843] Length = 273 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 7/264 (2%) Query: 36 PHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI I G I D+++ + + I ++ AL++ + SPGG+ + I+ A+++++ Sbjct: 11 KQIARIEITGAIASDTRKRVLKALEIVKERQYPALLLRIDSPGGTVGDSQEIYEALKRLQ 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +I ++AS G I +N I+A ++ GSIGV+ + ++ LDK+GVS K Sbjct: 71 KNTKIIASFGNISASGGVYIGMGANYIMANPGTITGSIGVILRGNNLERLLDKVGVSFKV 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS P K S E+ + +++QD++D+SY F++ V+ +RN+ ++ +DGRI+T Sbjct: 131 IKSGPYKDILSFDRELTDEEERILQDMIDTSYQQFLQTVAGARNLDVNQVKSFADGRIFT 190 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLS----IS 269 G +A ++G++D +G +E+ L G+ K + PK N S Sbjct: 191 GQQALELGVVDRLGTEEDARLWALELAGLPPDKTKCQTIEEPKPLLSRLTGNRSPIPPGL 250 Query: 270 SLLEDTIPLMKQTKVQGLWAVWNP 293 + + Q LW ++ P Sbjct: 251 QKTLQRLEFELEVNGQLLW-LYRP 273 >gi|307544582|ref|YP_003897061.1| peptidase [Halomonas elongata DSM 2581] gi|307216606|emb|CBV41876.1| putative peptidase [Halomonas elongata DSM 2581] Length = 361 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 13/289 (4%) Query: 7 KIKTRYVMLSLVTL-----TVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIER 56 K+ R+V L F+ VE PH+ + + G I+ + +IE Sbjct: 74 KLFFRFVFALLFLAFLALSFYGLFAAQGPVEAKGPHLGVVEVEGVIDRESPASASRVIEG 133 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLI 114 IER + A A+++ + SPGGS + I+ + +++ KP+I V ++ AS Y I Sbjct: 134 IERAWKAPGAKAVVLHIDSPGGSPVQSQRIYDEVMRLRESGDKPIIAVVEDIGASGAYYI 193 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ IVAA SLVGSIGV+ + + +LG+ + + K PF+++ P Sbjct: 194 ASAADEIVAAPASLVGSIGVIHAGFGFEQAIQRLGIERRVFTAGENKDFLDPFTDIEPSQ 253 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + Q+V+ +++ F+ V R L G IWTG +A +GL+D +G + Sbjct: 254 QRFWQEVLATTHKQFIDDVKAGRGDRLADDERLFSGLIWTGEQALDLGLVDRLGNLDGEE 313 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 + L D + F + S+ L P+ Q + Sbjct: 314 RRLLEEPRRHDYTPQLDPFERLSRRFGSVM-ASVLGLSSTEAPVRYQLR 361 >gi|217973227|ref|YP_002357978.1| signal peptide peptidase SppA [Shewanella baltica OS223] gi|217498362|gb|ACK46555.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS223] Length = 615 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 16/269 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGTQPAGQIGGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASIGVHTDGVSTSEWAG-LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G +E L R I+ P+ + Sbjct: 503 DKIAQGRVWSGKKALELGLVDELGDLDEAIAKAAKLADMTLFDTRVIEQELTPEQRFMQQ 562 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + S+SS L + L + + ++ + W Sbjct: 563 MF-ASVSSYLPAS--LSQSSMLEQMLQQW 588 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 48/277 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 +K+ + ++ ++ S ++ + + G I D ++ ++ +E + Sbjct: 22 TRKLILNLIFFGILAAIIISIGSSEDIQVEDNSALVLNLAGSIVDQKQQVDPLEAAFKQG 81 Query: 63 -DDSATA------LIVSLSSPGGSAYAGEAIF---------------------RAIQKVK 94 + +A ++ + +A + I A+ + K Sbjct: 82 QNANADGEILLADVLYVID----NAAQDQRISTLVLDLADLKRAGISKLQSIGDALNRFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + Y ++ ++ I V G+ Y K LDKL V Sbjct: 138 ESGKKVVAIGNYYEQNQYFLASFADTIYLNPQGGVSLDGLSMYNQYFKSALDKLKVKAHI 197 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI----------PYD 202 + K+ P+ +++ A + ++ + + + V+ +RNI Y Sbjct: 198 FRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAGNRNIEPNSLVPDATTYL 257 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++G + A A + +D + E+ Q++ Sbjct: 258 AELDKANGD--SAAMAINMKWVDSLATTEDFRQTMLE 292 >gi|182679840|ref|YP_001833986.1| signal peptide peptidase SppA, 36K type [Beijerinckia indica subsp. indica ATCC 9039] gi|182635723|gb|ACB96497.1| signal peptide peptidase SppA, 36K type [Beijerinckia indica subsp. indica ATCC 9039] Length = 324 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 98/303 (32%), Positives = 159/303 (52%), Gaps = 15/303 (4%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F +I T ++L+ + ++ Y S H+AR++I G I ++ + I+R+ Sbjct: 20 LSFW--RIATMALVLAGIA-SLAYVSLGFRSGQQRAHIARLSISGLITGDRDTLRLIKRV 76 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D SA A++VS+ SPGG+ E I+ A++++ +KP V MAAS GY+ + ++ Sbjct: 77 -EDSSAQAVLVSIESPGGTTTGAERIYEALRRLSRKKPTAAVVGTMAASGGYIAALGTDQ 135 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA SLVGSIGVLFQYP V LD LGV ++ VKSSP+KA P+ F P+A + Sbjct: 136 IVAQGNSLVGSIGVLFQYPNVARLLDTLGVKVEEVKSSPLKASPNGFEPTTPEARAALVS 195 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ SY WF LV E R + + +SDGR++TG + + L+D +GG++E L Sbjct: 196 LINDSYSWFKGLVKERRGMDDAQLANVSDGRVFTGRQGIPLHLVDRLGGEQEAIAWLEQQ 255 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNL-----------SISSLLEDTIPLMKQTKVQGLWA 289 ++DW + + +L S++ +L P + GL + Sbjct: 256 KGVGKNLPVRDWKHERGLGRWGIISLAAGLAEKLGLASLALVLNGESPFAGSPLLDGLVS 315 Query: 290 VWN 292 +W Sbjct: 316 IWQ 318 >gi|331668455|ref|ZP_08369303.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA271] gi|331063649|gb|EGI35560.1| signal peptide peptidase SppA, 67K type [Escherichia coli TA271] Length = 622 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQVFPGAQGLLVGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|289667892|ref|ZP_06488967.1| protease IV [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 583 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 11/255 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 281 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 340 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 341 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 400 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 401 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 460 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG +E + + +++ P + Sbjct: 461 AIDKVARGRVWSGAQAKERGLVDAFGGMQEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 520 Query: 262 DLKNLSISSLLEDTI 276 + + S + + Sbjct: 521 LMSGFAGSRMGAWML 535 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 49 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 107 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 108 QGQYLLAAQANEVYLDPM---GSVMLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 163 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ + +R + + L +G G + Sbjct: 164 AEPYILDAASADAKEADLFWMNDVWQRYLADIGTARKLSPAQLTAGIDTLPEGVAAAGGD 223 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 224 LAKFALQQKLVDGLKTREEVDALLVKRGVADS 255 >gi|261253430|ref|ZP_05946003.1| protease IV [Vibrio orientalis CIP 102891] gi|260936821|gb|EEX92810.1| protease IV [Vibrio orientalis CIP 102891] Length = 617 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 13/269 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 S + + +A + G I D + + DD A+++ + SP Sbjct: 316 SVAPTFDLAQDDIAVVVASGAIMDGSQPPGTVGGDTTAALLRQARNDDKVKAVVLRVDSP 375 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 376 GGSAFASEVIRNEIEALKEAGKPVVASMSSLAASGGYWISMSADRIVAQPTTLTGSIGIF 435 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L+ LG+ V +SP + ++ A Q Q ++ Y+ F+ LVS+ Sbjct: 436 SVITTFEKGLNNLGIYTDGVGTSPFSDVG-VTTGLSDGASQAFQMGIEHGYNRFIGLVSQ 494 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWN 253 SR+IP + ++ GR+WTG +A + GLID +G ++ + L + +I +++ Sbjct: 495 SRDIPLENVDDVAQGRVWTGQDALEFGLIDKIGDFDDAVKLAAELAKVEQYNIYWVEEPL 554 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 P + D N +L D L+ Q Sbjct: 555 SPAQQFIQDFMNQVKVNLGIDATALLPQA 583 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 101/283 (35%), Gaps = 50/283 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA------RIAIRGQIEDSQ------ 51 ++ I+ + L + + + + +P VA + I G I + Sbjct: 18 LITFIRLALINLIFLASIGAIYFLYTTADTPTP-VAPKESALIVNISGPIVEQSTYANPM 76 Query: 52 --------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 ++++ I D + + L+++L P + I +A+ Sbjct: 77 DSLTGSLLFGKELPKENVLFDIVDTIRHAKDDQNVSGLVLALRDLPETNLTKLRYIAKAL 136 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K KP+ V +M + Y ++ ++ I A V G Y K L+KL Sbjct: 137 NEFKASGKPIYA-VGDMYNQSQYYLASYADKIYLAPDGAVMLKGYSAYSLYYKTLLEKLD 195 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----- 202 V+ + K+ PF ++ A + + + ++ V+ +R + Sbjct: 196 VNTHVFRVGTYKSAIEPFIRDGMSDPAKESASRWLGQLWGAYIDDVASNRQLEPKLLTPD 255 Query: 203 -----KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + L ++G A + GL+D + +++V + L + Sbjct: 256 MDTFLELLKKNNGD--LAALSLNEGLVDQLATRQQVRKELIEV 296 >gi|300866223|ref|ZP_07110935.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] gi|300335742|emb|CBN56095.1| signal peptide peptidase A [Oscillatoria sp. PCC 6506] Length = 272 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 138/265 (52%), Gaps = 8/265 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I + ++E ++ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEINGAIAQEARKRVLEALKTVEE-RKFPALLLRIDSPGGTVGDSQEIYSALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++++ ++ ++AS G I + IV ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LQDQVKIVASFGNISASGGVYIGMGAPHIVTNPGTITGSIGVIIRGNNIEGLLEKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K++KS P K + E+ +++QD++D++Y FV+ V+E+RNIP + +DGRI Sbjct: 129 KTIKSGPYKDILAFDRELTEPEKEILQDLIDNTYQQFVQTVAEARNIPIETVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 ++G +A ++G++D +G +++ + L G+D + PK + L + +S Sbjct: 189 FSGQQALELGVVDRLGTEDDARRWAAELAGLDPEKTECCTLEKPKPFLTRALGSSLDTSG 248 Query: 272 LEDT---IPLMKQTKVQGLWAVWNP 293 L + LW ++ P Sbjct: 249 LSSAGNWLEFELSVSGLPLW-LYRP 272 >gi|84622191|ref|YP_449563.1| protease IV [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366131|dbj|BAE67289.1| protease IV [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 633 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 11/255 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTI 276 + + S + + Sbjct: 571 FMNGFAGSRMGAWML 585 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWQRYLADVVTARKLSPAQLTAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVKRGVADS 305 >gi|323968532|gb|EGB63938.1| signal peptide peptidase SppA [Escherichia coli M863] Length = 637 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVVTTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAIGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|312962571|ref|ZP_07777061.1| peptidase S49, SppA [Pseudomonas fluorescens WH6] gi|311283151|gb|EFQ61742.1| peptidase S49, SppA [Pseudomonas fluorescens WH6] Length = 327 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 18/294 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T +L ++ L + + A I +RG I D + ++ + Sbjct: 41 IFFKLLTFTYLLLMLALFSPLMDMEKSATRGAHYTALIEVRGVIADKEPASADNIVGSLR 100 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D +I+ ++SPGGS ++ I++++ P + + ++ AS Y I+ Sbjct: 101 AAFEDPKVKGVILRINSPGGSPVQSGYVYDEIRRLRGLHPDIKLYAVISDLGASGAYYIA 160 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV ++ S KA PF Sbjct: 161 SAADQIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRTYTSGEHKAFLDPFQPQKADET 220 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q V+D+++ F+ V + R + + L G IW+G +A +GLID +G V Sbjct: 221 QFWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSGLIWSGEQALPLGLIDGLGSASSV 280 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + + D+ ++ + K L S + + + L + L Sbjct: 281 ARDVIG------EKDLVDFTVEESPFDRFSKKLGAS--VAEKLALYMGFQGPSL 326 >gi|209919128|ref|YP_002293212.1| protease 4 [Escherichia coli SE11] gi|218695325|ref|YP_002402992.1| protease 4 [Escherichia coli 55989] gi|209912387|dbj|BAG77461.1| protease IV [Escherichia coli SE11] gi|218352057|emb|CAU97794.1| protease IV (signal peptide peptidase) [Escherichia coli 55989] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRLIPAQQVFPGAQGLLVGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|323186216|gb|EFZ71568.1| signal peptide peptidase SppA, 67K type [Escherichia coli 1357] Length = 618 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGKVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|254413026|ref|ZP_05026798.1| signal peptide peptidase SppA, 36K type [Microcoleus chthonoplastes PCC 7420] gi|196180190|gb|EDX75182.1| signal peptide peptidase SppA, 36K type [Microcoleus chthonoplastes PCC 7420] Length = 274 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 136/270 (50%), Gaps = 12/270 (4%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I G I + Q +++ ++ + AL++ + SPGG+ + I+ A+ Sbjct: 8 KSRKQIARIEITGLIAGNTRQRVLDALKTVEE-KKFPALLLRIDSPGGTVGDSQEIYSAL 66 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + +I ++AS G + + IV ++ GSIGV+ + ++ LDK+GV Sbjct: 67 MRLREKVKIIASFGNISASGGVYVGMGAEQIVTNPGTITGSIGVILRGNNLERLLDKIGV 126 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 S K VKS P K E+ ++Q+++D+SY FV+ V+E+RN+ + +DG Sbjct: 127 SFKVVKSGPYKDILGFDRELTDPEKTILQEMIDTSYQQFVQTVAEARNLAVETVRSFADG 186 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLK----- 264 RI+TG +A +G++D +G +E+ + L G+D K + PK + Sbjct: 187 RIFTGQQALDLGVVDRLGTEEDARRWAAELVGLDPEKTKCETIEEPKRLLSRLIPGNTGR 246 Query: 265 -NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 N +S+ + + T Q LW ++ P Sbjct: 247 MNSGLSAGINW-LEFELSTSGQPLW-LYRP 274 >gi|188574921|ref|YP_001911850.1| signal peptide peptidase SppA, 67K type [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519373|gb|ACD57318.1| signal peptide peptidase SppA, 67K type [Xanthomonas oryzae pv. oryzae PXO99A] Length = 629 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 11/255 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 327 DSRPQVAVVVATGEISGGEQPAGRIGGESTAALLRQARDDEKVKAVVLRVDSPGGEVFAS 386 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 387 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 446 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q +++ Y F V+++R+ D Sbjct: 447 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQALINKGYADFTGKVAQARHQSVD 506 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 507 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 566 Query: 262 DLKNLSISSLLEDTI 276 + + S + + Sbjct: 567 FMNGFAGSRMGAWML 581 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 22/215 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 95 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 153 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 154 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 209 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 210 AEPYILDAASADAREADLFWMNDVWQRYLADVGTARKLSPAQLTAGIDTLPEGVAAAGGD 269 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 A + L+D + +EEV L GV S + Sbjct: 270 LAKFALQQKLVDGLKTREEVDALLVKRGVADSDAE 304 >gi|160875523|ref|YP_001554839.1| signal peptide peptidase SppA [Shewanella baltica OS195] gi|160861045|gb|ABX49579.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS195] gi|315267710|gb|ADT94563.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS678] Length = 615 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 22/269 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGTQPAGQIGGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASIGVHTDGVSTSEWAG-LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G +E L R I+ P+ + Sbjct: 503 DKIAQGRVWSGKKALELGLVDELGDLDEAIAKAAKLADMTLFDTRVIEQELTPEQRFMQQ 562 Query: 263 L---------KNLSISSLLEDTIPLMKQT 282 + +LS SS+LE + + + Sbjct: 563 MFASVSSYLPASLSQSSMLEQMLAQLTSS 591 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 48/277 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 +K+ + ++ ++ S ++ + + G I D ++ ++ +E + Sbjct: 22 TRKLILNLIFFGILATIIISIGSSEDIQVEDNSALVLNLAGSIVDQKQQVDPLEAAFKQG 81 Query: 63 -DDSATA------LIVSLSSPGGSAYAGEAIF---------------------RAIQKVK 94 + +A ++ + +A + I A+ + K Sbjct: 82 QNANADGEILLADVLYVID----NAAQDQRISTLVLDLADLKRAGISKLQSIGDALNRFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + Y ++ ++ I V G+ Y K LDKL V Sbjct: 138 ESGKKVVAIGNYYEQNQYFLASFADTIYLNPQGGVSLDGLSMYNQYFKSALDKLKVKAHI 197 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI----------PYD 202 + K+ P+ +++ A + ++ + + + V+ +RNI Y Sbjct: 198 FRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAGNRNIEPNSLVPDATTYL 257 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++G + A A + +D + E+ Q++ Sbjct: 258 AELDKANGD--SAAMAINMKWVDSLATTEDFRQTMLE 292 >gi|271500691|ref|YP_003333716.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech586] gi|270344246|gb|ACZ77011.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech586] Length = 616 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 22/281 (7%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 T +Y ++ +S +A + G I D +E +I D A+I Sbjct: 308 FTSIYDYTTTPPATSSNEIAVVFASGTIIDGKETPGYVGGDTTAAQIRDARLDPKVKAII 367 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPVI + MAAS GY IS +N I+A+ +L Sbjct: 368 LRVNSPGGSVTASELIRSELMAARQAGKPVIVSMGGMAASGGYWISTPANTIIASPNTLT 427 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + LD +GV V +SP+ S + P+ Q+MQ ++ Y F Sbjct: 428 GSIGIFGVVTTFENALDSIGVHTDGVATSPLAD-LSQTKTLPPQVSQLMQLSIERGYQNF 486 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV++SR + ++ G +W G++AK GL+D +G ++ + L K+ Sbjct: 487 ISLVAQSRQKTPQEVDAIAQGHVWVGSDAKANGLVDQLGDFDDAVKKAAELA------KL 540 Query: 250 KDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 + + + W+ + +L + S + ++ + + VQ L Sbjct: 541 EQY---QLSWYTEEPDLLNVMFSQVRSSVYALLPSAVQALV 578 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 106/290 (36%), Gaps = 43/290 (14%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ +Y + + + + + G + D Sbjct: 19 LNFIREFILNLFLVCLILVAIGIYSQFKAPPTEPVRGALLLDLTGVVVDKPSVNNKLRQF 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + D + T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGASASRHQENSLFDIVDSIRQAKNDSNITGMVMDLSDFVGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 ++ KP+ + Y ++ +N I V G Y K LDKL V+ Sbjct: 139 FRDAGKPIFAVGDNFNQT-QYYLASFANKIYLTPQGNVDLHGFATNNLYYKTLLDKLKVT 197 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + K+ PF +++P A + + + + ++ V+ +R I + +D Sbjct: 198 AHIFRVGTYKSAVEPFIRDDMSPDAREADNRWISTLWQHYLDTVAANRQITPQQVFPGAD 257 Query: 210 GRIWTGAE---------AKKVGLIDVVGGQEEVWQSL-YALGVDQSIRKI 249 + G + A + L+D V + QSL A G D + Sbjct: 258 A-VLAGLQKMDGDTARYALENKLVDEVAPHSAIEQSLIKAFGWDAKTKNF 306 >gi|288927850|ref|ZP_06421697.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 317 str. F0108] gi|288330684|gb|EFC69268.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 317 str. F0108] Length = 591 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 135/279 (48%), Gaps = 17/279 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSL 73 S + + +A G+I S+++ + +E + DD A+++ + Sbjct: 294 SQDADTDDGTIAIYYAEGEIVQIAPGGMFNNSTNIVSKDICKDLEDLKNDDDIKAVVLRV 353 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +SPGG AYA E I+ + +++ +KPV+ + + AAS GY +SC +N IVA +L GSIG Sbjct: 354 NSPGGDAYASEQIWHQVTELRKKKPVVVSMGDYAASGGYYMSCGANWIVAEPNTLTGSIG 413 Query: 134 VLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSP-FSEVNPKAVQMMQDVVDSSYHWFVR 191 + +P + + +KLGV VK++ A + N + M+Q ++ Y F+ Sbjct: 414 IFGVFPDLSGLVTEKLGVKFDEVKTNANSAFGNVAARPFNTAEMAMLQGYINRGYATFLN 473 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 VS+ R +P ++ GR+W GA+A K+ L+D +GG ++ + L + + + Sbjct: 474 RVSQGRKMPVTNLDKIAQGRVWLGADALKIKLVDQLGGIKDAVEKAAQLAKIKDY-GVSE 532 Query: 252 WNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 + P ++ ++ + L++ + L + + Sbjct: 533 YPAPASWQDQLFNSVVPRNTLDEQLRLTLGAAYEPFMLI 571 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 39/271 (14%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-------------------S 50 ++++S++ + S + + V I + G I + Sbjct: 23 FAFMIMSIIGMIA---SADTETKLKDNSVLTINLSGTISEMAAPDVLGFLSGNTIENNGL 79 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGE----AIFRAIQKVKNRKPVITEVHEM 106 +++ I + +D + + G AG + A+ K I + Sbjct: 80 NDMLLAIRKAKNNDDIKGIYLEA----GPLVAGFSTLQELRDALADFKKSGKWIVAYGDT 135 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ +N I V G+ Q Y+K K GV + K K+ Sbjct: 136 YTQGCYYVASVANHIFLNPQGQVDWHGLSSQPYYIKDLAAKFGVKYQVAKVGTFKSATEM 195 Query: 167 FSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA---KKV 221 F+E +Q ++ + + VSESR I +D A+A K Sbjct: 196 FTETKMSDANRLQVSMYLNGLWANVCKAVSESRKISIPALNTYAD-EYQLFADAQSLVKK 254 Query: 222 GLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 +D + ++V + L + D+SI ++ Sbjct: 255 RFVDKLLYADQVKGEVKKLLGIDSDKSINQV 285 >gi|325913830|ref|ZP_08176189.1| signal peptide peptidase SppA, 67K type [Xanthomonas vesicatoria ATCC 35937] gi|325539905|gb|EGD11542.1| signal peptide peptidase SppA, 67K type [Xanthomonas vesicatoria ATCC 35937] Length = 633 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 11/255 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + DD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDEVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG +E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKQHGLVDAFGGMQEAVADAANRAKLSKGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTI 276 + + S + + Sbjct: 571 FMSGFAGSRMGAWML 585 Score = 79.4 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 84/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKLQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G + G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWQRYLGDVGTARKLTPAQLTAGIDTLPEGVVAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +E+V L GV S Sbjct: 274 LAKFALQQKLVDGLKTREDVDALLTKRGVADS 305 >gi|313672173|ref|YP_004050284.1| signal peptide peptidase sppa, 36k type [Calditerrivibrio nitroreducens DSM 19672] gi|312938929|gb|ADR18121.1| signal peptide peptidase SppA, 36K type [Calditerrivibrio nitroreducens DSM 19672] Length = 284 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 131/258 (50%), Gaps = 9/258 (3%) Query: 7 KIKTRYVMLSLVTLTV---VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 K +++++ L+ V VY N + + + G I +S LIE++++ +D Sbjct: 5 KFLFKFLIILLIAGFVGRAVYLLNYKTPVINKKMIVLLDLEGIILESDTLIEKLKKYEKD 64 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + +I+ ++SPGG+ + I+R I+++ KPV + +AAS GY ++ A + I A Sbjct: 65 SNVVGVILRINSPGGAVAPSQEIYRFIKRMS--KPVYASMSTVAASGGYYVASACDRIYA 122 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ++ GSIGV+ ++ + DK+GV +++KS K S + + +++ VD Sbjct: 123 MPGTITGSIGVIMKFTDLSKIYDKIGVRTETIKSGKFKDIGSTTRSMTEEEKSILKQSVD 182 Query: 184 SSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 Y+ F+ + R + ++ L +DGRI TG EAK + L+D +G E+ ++ + Sbjct: 183 DVYNQFIEDILSKRTFLNKEELLKYADGRIITGREAKNLKLVDKLGSYEDAYEDMKK--- 239 Query: 243 DQSIRKIKDWNPPKNYWF 260 D++ + + P F Sbjct: 240 DKNTLDAELFIPKDEKTF 257 >gi|304408856|ref|ZP_07390477.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS183] gi|307302859|ref|ZP_07582614.1| signal peptide peptidase SppA, 67K type [Shewanella baltica BA175] gi|304352677|gb|EFM17074.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS183] gi|306913219|gb|EFN43641.1| signal peptide peptidase SppA, 67K type [Shewanella baltica BA175] Length = 615 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 22/269 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGTQPAGQIGGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASIGVHTDGVSTSEWAG-LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G +E L R I+ P+ + Sbjct: 503 DKIAQGRVWSGKKALELGLVDELGDLDEAIAKAAKLADMTLFDTRVIEQELTPEQRFMQQ 562 Query: 263 L---------KNLSISSLLEDTIPLMKQT 282 + +LS SS+LE + + + Sbjct: 563 MFASVSSYLPASLSQSSMLEQMLAQLTSS 591 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 93/277 (33%), Gaps = 48/277 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 +K+ + ++ ++ S ++ + + G I D ++ ++ +E + Sbjct: 22 TRKLILNLIFFGILAAIIISIGSSEDIQVEDNSALVLNLAGSIVDQKQQVDPLEAAFKQG 81 Query: 63 -DDSATA------LIVSLSSPGGSAYAGEAIF---------------------RAIQKVK 94 + +A ++ + +A + I A+ + K Sbjct: 82 QNANADGEILLADVLYVID----NAAQDQRISTLVLNLADLKRAGISKLQSIGDALNRFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + Y ++ ++ I V G+ Y K LDKL + Sbjct: 138 ESGKKVVAIGNYYEQNQYFLASFADTIYLNPQGGVSLDGLSMYNQYFKSALDKLKIKAHI 197 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI----------PYD 202 + K+ P+ +++ A + ++ + + + V+ +RNI Y Sbjct: 198 FRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAGNRNIEPNSLVPDATTYL 257 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++G + A A + +D + E+ Q++ Sbjct: 258 AELDKANGD--SAAMAINMKWVDSLATTEDFRQTMLE 292 >gi|53720054|ref|YP_109040.1| peptidase [Burkholderia pseudomallei K96243] gi|53725724|ref|YP_102320.1| peptidase, U7 family protein [Burkholderia mallei ATCC 23344] gi|76810646|ref|YP_334296.1| peptidase [Burkholderia pseudomallei 1710b] gi|126451071|ref|YP_001081348.1| peptidase, U7 family protein [Burkholderia mallei NCTC 10247] gi|126452303|ref|YP_001067106.1| peptidase, U7 family protein [Burkholderia pseudomallei 1106a] gi|254177667|ref|ZP_04884322.1| peptidase, U7 family protein [Burkholderia mallei ATCC 10399] gi|254191226|ref|ZP_04897730.1| peptidase, U7 family protein [Burkholderia pseudomallei Pasteur 52237] gi|254195901|ref|ZP_04902327.1| peptidase, U7 family protein [Burkholderia pseudomallei S13] gi|254199213|ref|ZP_04905579.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei FMH] gi|254205520|ref|ZP_04911872.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei JHU] gi|254261915|ref|ZP_04952969.1| peptidase, U7 family protein [Burkholderia pseudomallei 1710a] gi|254296852|ref|ZP_04964305.1| peptidase, U7 family protein [Burkholderia pseudomallei 406e] gi|254357687|ref|ZP_04973960.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei 2002721280] gi|52210468|emb|CAH36451.1| family S49 unassigned peptidase [Burkholderia pseudomallei K96243] gi|52429147|gb|AAU49740.1| peptidase, U7 family protein [Burkholderia mallei ATCC 23344] gi|76580099|gb|ABA49574.1| family S49 unassigned peptidase [Burkholderia pseudomallei 1710b] gi|126225945|gb|ABN89485.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 1106a] gi|126243941|gb|ABO07034.1| peptidase, U7 family protein [Burkholderia mallei NCTC 10247] gi|147748809|gb|EDK55883.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei FMH] gi|147752963|gb|EDK60028.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei JHU] gi|148026814|gb|EDK84835.1| putative signal peptide peptidase SppA, 36K type [Burkholderia mallei 2002721280] gi|157807338|gb|EDO84508.1| peptidase, U7 family protein [Burkholderia pseudomallei 406e] gi|157938898|gb|EDO94568.1| peptidase, U7 family protein [Burkholderia pseudomallei Pasteur 52237] gi|160698706|gb|EDP88676.1| peptidase, U7 family protein [Burkholderia mallei ATCC 10399] gi|169652646|gb|EDS85339.1| peptidase, U7 family protein [Burkholderia pseudomallei S13] gi|254220604|gb|EET09988.1| peptidase, U7 family protein [Burkholderia pseudomallei 1710a] Length = 333 Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLAVLGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 287 Query: 236 SLYA 239 + Sbjct: 288 DVLK 291 >gi|294624143|ref|ZP_06702878.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601561|gb|EFF45563.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 633 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + DD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDDVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + L + L A P Sbjct: 571 FMSGFAGSRMGAWM--LSDSGMARALLARSLP 600 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKLQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWRRYLADVGTARKLSPAQLAAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVQRGVADS 305 >gi|282897594|ref|ZP_06305594.1| Peptidase S49, protease IV [Raphidiopsis brookii D9] gi|281197517|gb|EFA72413.1| Peptidase S49, protease IV [Raphidiopsis brookii D9] Length = 607 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 9/230 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 +++ +A + G+I D + + +I +D ++++ ++SPGGSA A Sbjct: 311 QNSQNKIAVVYAEGEIVDGEGESSQIGGDRYARILRKIRQDQDIKSVVLRVNSPGGSATA 370 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R IQ K KPVI + ++AAS GY I+ S+ I A +L GSIGV + Sbjct: 371 SEIIEREIQLTKQVKPVIVSMGDIAASGGYWIASNSDHIFAEPGTLTGSIGVFGVLLNGQ 430 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ +VK+S + +P+ + + Q V+ Y+ F+ V + R +P Sbjct: 431 KLANNNGITWDTVKTSEFADSQTVSRPKSPQELAIYQRSVNRIYNMFINKVVQGRKLPET 490 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 K ++ GR+W+GA AK++GL+D +GG + +++++ Sbjct: 491 KVGEIAQGRVWSGATAKEIGLVDEIGGLNMAIEYAAKKAKLGKDWQVEEY 540 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 113/282 (40%), Gaps = 19/282 (6%) Query: 21 TVVYFSWSSHVEDNSP-HVARIA--IRGQIEDS---QELIERIERISRDDSATALIVSL- 73 +++ F S + + P + + + G E+ ++LI +E+ + D + +++ Sbjct: 51 SMLVFDLSVKITETQPSYTEVLEKTLTGAGEEQITLRQLIGALEQAAEDQRIVGIYINVS 110 Query: 74 SSPGGSAYAGE---AIFRAIQKVKNR-KPVITEVHEMAASA-GYLISCASNIIVAAETSL 128 S S+ I +A++K + K +I + S Y +S +N I + Sbjct: 111 ESSKVSSLGYASLREIRQALEKFRASGKKIIAY--GVGWSEREYYLSSVANKIFLNPVGM 168 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSY 186 + G+ Q ++ L K G+ ++ V+ K P +++P+ + Q ++D + Sbjct: 169 IEINGLSSQPIFLTGALQKYGIGVQVVRVGKFKGAVEPLVLDKLSPENREQTQQLLDDLW 228 Query: 187 HWFVRLVSESRNIPYDKTLVLS--DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + V +SR I + ++ G + +AK GLID V ++V L +G Sbjct: 229 GEWRNSVGKSRKISPEILQEIANNQG-VLEAKDAKDNGLIDEVAYTDQVVADLKTIGTSD 287 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + K P +Y +S + + + V G Sbjct: 288 NDGKSFRQIPIGDYVQASEIEEQQNSQNKIAVVYAEGEIVDG 329 >gi|126174276|ref|YP_001050425.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS155] gi|125997481|gb|ABN61556.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS155] Length = 615 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 22/269 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGTQPAGQIGGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASIGVHTDGVSTSEWAG-LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G +E L R I+ P+ + Sbjct: 503 DKIAQGRVWSGKKALELGLVDELGDLDEAIAKAAKLADMTLFDTRVIEQELTPEQRFMQQ 562 Query: 263 L---------KNLSISSLLEDTIPLMKQT 282 + +LS SS+LE + + + Sbjct: 563 MFASVSSYLPASLSQSSMLEQMLAQLTSS 591 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 93/277 (33%), Gaps = 48/277 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 +K+ + ++ ++ S ++ + + G I D ++ ++ +E + Sbjct: 22 TRKLILNLIFFGILAAIIISIGSSEDIQVEDNSALVLNLAGSIVDQKQQVDPLEAAFKQG 81 Query: 63 -DDSATA------LIVSLSSPGGSAYAGEAIF---------------------RAIQKVK 94 + +A ++ + +A + I A+ + K Sbjct: 82 QNANADGEILLADVLYVID----NAAQDQRISTLVLDLADLKHAGISKLQSIGDALNRFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + Y ++ ++ I V G+ Y K LDKL + Sbjct: 138 ESGKKVVAIGNYYEQNQYFLASFADTIYLNPQGGVSLDGLSMYNQYFKSALDKLKIKAHI 197 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI----------PYD 202 + K+ P+ +++ A + ++ + + + V+ +RNI Y Sbjct: 198 FRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAGNRNIEPNSLVPDATTYL 257 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++G + A A + +D + E+ Q++ Sbjct: 258 AELDKANGD--SAAMAINMKWVDSLATTEDFRQTMLE 292 >gi|294663994|ref|ZP_06729409.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606238|gb|EFF49474.1| protease IV [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 633 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + DD A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDDDVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + L + L A P Sbjct: 571 FMSGFAGSRMGAWM--LSDSGMARALLARSLP 600 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKLQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWRRYLADVGTARKLSPAQLAAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVQRGVADS 305 >gi|261403174|ref|YP_003247398.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus vulcanius M7] gi|261370167|gb|ACX72916.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus vulcanius M7] Length = 311 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 73/286 (25%), Positives = 145/286 (50%), Gaps = 23/286 (8%) Query: 5 LKKIKTRYVMLSLVT--------LTVVYFSWSSHVEDNSPHVARIAIRGQIE-------- 48 +KKI + L L+ L ++ FS + +A++ + +I Sbjct: 1 MKKIYVVIIALFLILVCLLAVGVLAILSFSGENIDLLGGNKIAKVYLCNEIYFDYSQGDG 60 Query: 49 -------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 D++ I ++++ +D+S +++ ++SPGG A E + R + ++ +KPV+ Sbjct: 61 LFPSEKKDARYYINLLDKLEKDNSVKGVLLIVNSPGGEVIASEKLARKVAELAKKKPVVV 120 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V ++ AS Y+ S +N IVA + S+VGSIGV + + KLG+++ ++K+ K Sbjct: 121 YVEDLDASGAYMASVPANYIVAEKHSIVGSIGVRMDIIHYYGLMKKLGINVTTIKAGKYK 180 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 SP+ + + + +Q +++ +Y FV+ V++ R++P + T ++DG+I++G +AKKV Sbjct: 181 DIGSPYRPMTKEEKEYLQKMINETYIDFVKWVAKYRHLPLNYTFKIADGKIYSGEDAKKV 240 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 GL+D VG +E + L L + ++ F +L Sbjct: 241 GLVDEVGTEETALKKLEQLANVSNPEIVEYGLEENRGLFGLTYDLG 286 >gi|237748404|ref|ZP_04578884.1| peptidase U7 family [Oxalobacter formigenes OXCC13] gi|229379766|gb|EEO29857.1| peptidase U7 family [Oxalobacter formigenes OXCC13] Length = 315 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 14/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIE 58 + K+ T +++ ++ S H A + IRG I+ S +I+ ++ Sbjct: 30 IFFKLTTIILVIFVIFSIKSLSFSSKETVPVQKHTAMVEIRGTIDSSGNSSAANIIKALD 89 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 + + AT +I+ ++SPGGS I+ I++++ KP+ V E+ AS GY ++ Sbjct: 90 KAYDEPLATGVILKINSPGGSPVQAGMIYDEIRRLREVHPDKPLYVVVEELCASGGYYVA 149 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + SLVGSIGV+ V + KLGV + + + K PFS P+ V Sbjct: 150 AAADKIFVDKASLVGSIGVMINGFGVTGLMQKLGVERRLLTAGEYKGFLDPFSPQTPQQV 209 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q Q +++ + F+ +V + R + + G ++ G EA K+GL D +G E V + Sbjct: 210 QYAQSMLNQIHQQFIEVVRQGRGDRLKENREIYSGLVFLGPEAIKMGLADELGTVESVAR 269 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + V I D+ + LK S Sbjct: 270 DVIGEPV------IVDYTEQERLSDRFLKKFGAS 297 >gi|329298719|ref|ZP_08256055.1| protease 4 [Plautia stali symbiont] Length = 618 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 22/281 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSL 73 +Y+ ++A I G I D +E +I DD A+++ + Sbjct: 313 IYYYNVKQPTQQDGNIAVILASGAIMDGEESAGNVGGDTTAAQIRDARLDDKIKAIVLRV 372 Query: 74 SSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A EAI + KPV+ + MAAS GY IS ++ IVAA ++L GSI Sbjct: 373 NSPGGSVTASEAIREELAAAHDAGKPVVVSMGGMAASGGYWISTPADYIVAAPSTLTGSI 432 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ V+ L +GV V +SP+ S + +A Q+MQ +++ Y FV L Sbjct: 433 GIFGVINTVENSLSSIGVHSDGVATSPLADV-STTKALPTEAQQLMQLTIENGYRNFVGL 491 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ SR+ + ++ G +WTG++AK GL+D +G ++ L Sbjct: 492 VAASRHKTPQQIDAIAQGHVWTGSDAKANGLVDALGDFDDAVAKAAELAKVAK------- 544 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P+ W+ D + LL + + Q + VW P Sbjct: 545 --PELSWYHDDPGMI--DLLLNQMNASAQAVLPAALKVWLP 581 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 105/281 (37%), Gaps = 44/281 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA--RIAIRGQIEDS-------- 50 + F+ + I ++++ ++ ++ SS ++ + G + D Sbjct: 19 LNFIREFILNLFLIVLILAGVGIWLQLSSASSSEPVQQGALKVDLSGVLVDKPSVSNRLS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L GS + + +A+ Sbjct: 79 RISRQLLGASSDRLQENSLFDVVDAIRQAKSDKNITGMVLDLRDFAGSDQPSLQYVGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KP+ + + + A Y ++ + + + V G Y K LDKL Sbjct: 139 REFRDAGKPIFA-LGDSYSQAQYYLASYATKVYLSPQGTVDLHGFATNGLYYKSLLDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 VS + K+ PF +++P+A V + ++ VS +R I + Sbjct: 198 VSSHVFRVGTYKSAVEPFLRDDMSPEARDADGRWVGQLWQNYLNTVSANRQITPQQLFPG 257 Query: 208 SDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + G I +G + A + L+DV+ + + L Sbjct: 258 AAG-IISGLQEVQGDTAKYALENKLVDVLDSRAAADRELVK 297 >gi|86747765|ref|YP_484261.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris HaA2] gi|86570793|gb|ABD05350.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rhodopseudomonas palustris HaA2] Length = 321 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 165/304 (54%), Gaps = 15/304 (4%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + ++ V + V S + S +ARI I G I + E +E +ER+ Sbjct: 17 KLTFWRVAAVLVAIGAVIAVGAMVSPAGPALTTSGSIARIKIDGLIRSNSERVEALERLE 76 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + +SA A+IV ++SPGG+ E ++ A+ ++K +KP++ V +AAS GY+ + AS+ I Sbjct: 77 KSNSA-AVIVHINSPGGTTAGSEELYTALMRLKAKKPMVVVVEGLAASGGYIAALASDHI 135 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A ++SLVGSIGVLFQYP V + +GV ++ VKSSP+KA P+ F +P+A ++ + Sbjct: 136 IAQQSSLVGSIGVLFQYPNVSELMKTVGVKVEEVKSSPLKAAPNGFEPTSPEARAALESL 195 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V SY WF LV + R + D+ +++DGR++TG +A + LID +G ++ L Sbjct: 196 VRDSYAWFRDLVKQRRAMDDDQLGIVADGRVFTGRQAVGLKLIDQLGDEKTAVAWLETEK 255 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNL-SISSLLEDTIPL-----------MKQTKVQGLWA 289 +S ++D+ + F DL L + +S+ D + L + G+ A Sbjct: 256 RVKSGLPVRDFKL--SPQFGDLTFLRAAASITLDALGLGVIARQVEQSGAMHLGLDGMLA 313 Query: 290 VWNP 293 +W P Sbjct: 314 LWVP 317 >gi|82776787|ref|YP_403136.1| protease 4 [Shigella dysenteriae Sd197] gi|81240935|gb|ABB61645.1| protease IV [Shigella dysenteriae Sd197] Length = 618 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVTKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D+ Sbjct: 27 LNLFFIFLVLVGVGLWMQVSGGDSKETASRGALLLDISGVIVDNPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNAVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|289578008|ref|YP_003476635.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter italicus Ab9] gi|289527721|gb|ADD02073.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter italicus Ab9] Length = 305 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 139/270 (51%), Gaps = 13/270 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL----------IERIERISRDDS 65 S+V++ V V S + I I G I + + +E+I + D++ Sbjct: 19 SIVSMFVSMPQQDKGVATASNTIGVIMIEGVIGQTTNILGIPQNINDPVEQIRKAQEDNA 78 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAA 124 A++V ++SPGGSA I++ ++K+K +I + + AAS GY+++ A +IIVA Sbjct: 79 VRAVVVKINSPGGSAAKSIEIYKELKKLKKTGKKIIVSMGDAAASGGYMVAAAGDIIVAN 138 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ +++Q V++ Sbjct: 139 PATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDIGSPTRDLTPEEKKILQGVIED 198 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 ++ F+ +VSE R +P DK L+DGRI+TG +A KVGL+D +G + Q Sbjct: 199 TFQQFLEIVSEGRKMPIDKVKELADGRIFTGRQALKVGLVDKLGDFYDAVDIAAKEAGMQ 258 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 +K + P L S LED Sbjct: 259 GKPVLKYYATP--TPLSILFGSGAKSNLED 286 >gi|258404286|ref|YP_003197028.1| signal peptide peptidase SppA, 36K type [Desulfohalobium retbaense DSM 5692] gi|257796513|gb|ACV67450.1| signal peptide peptidase SppA, 36K type [Desulfohalobium retbaense DSM 5692] Length = 296 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 2/267 (0%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F I + Y+S + +RG + +++ + IE + + Sbjct: 15 FGFMLIAAAVALFMGAMAAFSYWSGQGGGWGQPQI-GVVHVRGVLTNARPVTHWIETLRQ 73 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + ++V ++SPGG + ++ A+ + KPV+ + +AAS GY ++ + I Sbjct: 74 KNRVKGVLVRINSPGGVVAPSQEVYSAVSSLAEDKPVVVSMGSVAASGGYYVAVGAPTIF 133 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ GSIGV Q K LDKLG+ ++V S P+K S + + MQ +V Sbjct: 134 ANPGTITGSIGVKAQLKNFKGLLDKLGIEDETVVSGPLKDATSAAKPMTEAERKYMQGMV 193 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALG 241 D + FV+ +++ R++ + L+DGR +TG +AK +GL+D +G ++ L + Sbjct: 194 DDMHAQFVQAIAKGRDMDLEVVRRLADGRAYTGRQAKDLGLVDALGSMQDALDVLRHKAQ 253 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSI 268 V ++ ++ W L +SI Sbjct: 254 VGTDYALVEGPERERSLWQWLLSTVSI 280 >gi|161503605|ref|YP_001570717.1| protease 4 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864952|gb|ABX21575.1| hypothetical protein SARI_01684 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 618 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + VK KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAVKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ AE S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPL-AEISMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+E+R ++ ++ G +WTG +AK GL+D +G ++ AL + Sbjct: 489 ITLVAEARKRTPEQIDKIAQGHVWTGQDAKANGLVDKLGDFDDAVAKAAALAKLKQWHLD 548 Query: 250 KDWNPPK-NYWFCDLKNLSISSLLEDTIPLMKQTKV 284 N P D S+ ++L + I M + Sbjct: 549 YYQNEPTVLDMIMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSNRLQENSLFDIVNTIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + + G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQINLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVSTNRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|330810999|ref|YP_004355461.1| peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379107|gb|AEA70457.1| putative peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 329 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 16/276 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + + L S + A I I G I D + ++ + Sbjct: 43 IFFKLLTFTYLFVALALFTPLMDMEKSAVAGSAYTALINIEGMIADKEPASADNIVGSLR 102 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I +++ P V + ++ AS Y I+ Sbjct: 103 AAFEDSKVKGVVLRINSPGGSPVQSGYVYDEIVRLRALHPDIKVYAVISDLGASGAYYIA 162 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++KLGV + S K+ PF P+ Sbjct: 163 SAADQIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRVYTSGEHKSFLDPFQPQKPEET 222 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+D+++ F+ V + R + + L G +W+G +A +GLID +G V Sbjct: 223 AFWQSVLDTTHKQFIASVKKGRGERLKDKEHPELFSGLVWSGEQALPLGLIDGLGSASSV 282 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + + + D+ ++ + K L S Sbjct: 283 ARDVIG------QKDLVDFTIEESPFDRFSKKLGAS 312 >gi|92115699|ref|YP_575428.1| signal peptide peptidase SppA, 36K type [Nitrobacter hamburgensis X14] gi|91798593|gb|ABE60968.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Nitrobacter hamburgensis X14] Length = 325 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 88/270 (32%), Positives = 146/270 (54%), Gaps = 15/270 (5%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + R+ I G I + Q +E +ER+ + +A A+IV ++SPGG+ E ++ A+ ++K +K Sbjct: 53 IQRVNIEGLIRNDQNRVEALERLGK-SNAPAVIVHINSPGGTTAGSEQLYDALMRLKAKK 111 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V + AS GY+ + AS+ I+A +T+LVGSIGVLFQYP L +GV ++ VKS Sbjct: 112 PMVVVVDGLCASGGYIAALASDHIIAQQTALVGSIGVLFQYPNFTDLLKTVGVKVEEVKS 171 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ F +P+A + +V SY WF LV R + + ++DGR++TG + Sbjct: 172 SPLKAAPNGFEPTSPEARAALDALVKDSYAWFRGLVQTRRGMDNGQLEKVADGRVFTGRQ 231 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY------------WFCDLKN 265 A + LID +G ++ L A ++D+ + F L Sbjct: 232 AVDLKLIDQLGDEKAAIAWLVAEKKITPDLPVRDFKLSPRFGDMTFLRTAASVTFDALGL 291 Query: 266 LSISSLLEDT--IPLMKQTKVQGLWAVWNP 293 SI+ +E T + + + G+ A+W P Sbjct: 292 SSIARQVEQTGIVRAADRLGLDGMLALWQP 321 >gi|302344134|ref|YP_003808663.1| signal peptide peptidase SppA, 36K type [Desulfarculus baarsii DSM 2075] gi|301640747|gb|ADK86069.1| signal peptide peptidase SppA, 36K type [Desulfarculus baarsii DSM 2075] Length = 300 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 68/274 (24%), Positives = 129/274 (47%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 L+ L + V V + + G I + +I ++ DDS A+++ + Sbjct: 20 LAGAMLLLDRGDGFKLVGLRGKKVGVVEVSGTITSAAPVIFDLQDFREDDSIKAIVLRVD 79 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + IFR + + KPV+ + E+AAS GY ++ I+A+ ++ GSIGV Sbjct: 80 SPGGGVAASQEIFREVARTAEVKPVVCSMGEVAASGGYYVAAPCTKIMASPGTITGSIGV 139 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + P V KLGV ++ V++ +K +P ++P M+Q ++D S+ F+ V+ Sbjct: 140 IASVPDVTDLFGKLGVRMQYVQAGKLKGAGAPGRPLSPDERDMLQQIIDLSHRQFIDDVA 199 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +R + K ++DGR+ G A +GL+D G + L ++ Sbjct: 200 SARKLDKAKLRAVADGRVILGEAAVGLGLVDETGNFNDAVDLAAELAHIDGQPELIWPAD 259 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 ++ W +L +S+ + +++ +VQ ++ Sbjct: 260 EESSWLGNLVQEQVSTAVRAIADNLQKPRVQYIF 293 >gi|325925728|ref|ZP_08187103.1| signal peptide peptidase SppA, 67K type [Xanthomonas perforans 91-118] gi|325543856|gb|EGD15264.1| signal peptide peptidase SppA, 67K type [Xanthomonas perforans 91-118] Length = 642 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 340 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEVKAVVLRVDSPGGEVFAS 399 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 400 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 459 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 460 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 519 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 520 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 579 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + + + L A P Sbjct: 580 FMSGFAGSRMGAWMLG--DSGMARALLARSLP 609 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 108 RDLVRVIEAAGKDRKIERVLLNLDKLQPSGFASQ-REVAVALQKLRASGKQIVAFSESMS 166 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 167 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 222 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 223 AEPYILDAASADAKEADLFWMNDVWQRYLADVGTARKLSPAQLAAGIDTLPEGVAAAGGD 282 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 283 LAKFALQQKLVDGLKTREEVDALLVKRGVADS 314 >gi|124026360|ref|YP_001015476.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. NATL1A] gi|123961428|gb|ABM76211.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. NATL1A] Length = 269 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 5/264 (1%) Query: 33 DNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I G I +++ +++I AL++ + SPGG+ + I A+ Sbjct: 8 KSKKRMARICIEGPINSETRKIVLKALKQIEE-REFPALLLRIDSPGGTVGDSQEIHSAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + V+ ++AS G I + IVA ++ GSIGV+ + + L+K+G Sbjct: 67 LRLREKGCHVVASFGNISASGGVYIGVGAEKIVANPGTITGSIGVILRGNNLSKLLEKVG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + ++Q ++DSSY FV VS+ RN+ + +D Sbjct: 127 IKFETVKSGIYKDILSPDRPLSTEERALLQSLIDSSYEQFVLAVSKGRNLTPEVVKSFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR++TG +AK+ GL+D +G + + + K + K L I Sbjct: 187 GRVFTGEQAKEFGLVDEIGDENDAKLLAIKIANLDEKTKPITFGKTKKKLLGFLPGGKII 246 Query: 270 SLLEDTIPLMKQTKVQGLWAVWNP 293 L + + L + Q LW ++ P Sbjct: 247 HNLANALNLELEGNGQILW-LFKP 269 >gi|194290172|ref|YP_002006079.1| signal peptide peptidase, s49 family [Cupriavidus taiwanensis LMG 19424] gi|193224007|emb|CAQ70016.1| Putative signal peptide peptidase, S49 family [Cupriavidus taiwanensis LMG 19424] Length = 398 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 17/292 (5%) Query: 7 KIKTRYV---MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 +I R V +L L+ V F + + H A + + G+I ++ + ++ Sbjct: 112 RIFFRLVTLGLLVLILFAVFDFKGDGTITASGRHTAMVTLEGEIAAGTPASAEAINASLQ 171 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 D +A +I+ ++SPGGS I I +++ KP+ V E+ AS GY ++ Sbjct: 172 AAFADSNAAGVILKINSPGGSPVQAGIINDEIHRLRGLYPSKPLYVVVEEICASGGYYVA 231 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 232 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPKQK 291 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ + F+ +V E R L G W+G + +GL D +G E V + Sbjct: 292 AFAEAMLKQIHQQFIDVVKEGRGDRLKDDPELFSGLFWSGERSVALGLADGLGSAEYVAR 351 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 L+ I D+ +N K + ++ T +QG+ Sbjct: 352 DLF------KAEDIVDYTVKENIAERVAKRFGAAVGTAAMKTMLWSTGMQGM 397 >gi|168263890|ref|ZP_02685863.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347569|gb|EDZ34200.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 618 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L +TI M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPETIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|323495030|ref|ZP_08100119.1| protease IV [Vibrio brasiliensis LMG 20546] gi|323310687|gb|EGA63862.1| protease IV [Vibrio brasiliensis LMG 20546] Length = 616 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 13/269 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 + + + + +A + G I D + + + DD A+++ + SP Sbjct: 315 TMTPKFDLAADDIAIVVASGAIMDGSQPRGTVGGDTVAALLRQARNDDKVKAVVLRVDSP 374 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 375 GGSAFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWISMSADRIVAQPTTLTGSIGIF 434 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L+KLG+ V +SP + ++ A Q Q ++ Y+ F+ LVS+ Sbjct: 435 SVLTTFEKGLNKLGIYTDGVGTSPFSDVG-VTTGLSDGASQAFQMGIEHGYNRFIGLVSQ 493 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWN 253 SR IP ++ ++ GR+WTG +A + GL+D +G ++ + L + +++ Sbjct: 494 SREIPLEQVDNVAQGRVWTGQDALEFGLVDKIGDFDDAVELAAELAKVEQYNLYWVEEPL 553 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 P + D N + L D ++ Q Sbjct: 554 SPAQQFIQDFMNQVSAHLGIDPTAMLPQA 582 Score = 79.8 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 105/283 (37%), Gaps = 48/283 (16%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDS------ 50 + + ++ L ++ ++YF ++S E P V + I G I + Sbjct: 17 KLITFIRLALVNLIFLASIGIIYFIYTS-AEAPVPTVPKESALIVNISGPIVEQPTYVNP 75 Query: 51 -------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 ++++ I D+ + ++++L P + I +A+ Sbjct: 76 MDSLTGSFFGQSLPKENVLFDIVDTIRHAKDDEQISGIVLALRDMPETNLTKLRYIAKAL 135 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K KP+ S Y ++ ++ I A V G Y K L+KL Sbjct: 136 NEFKASGKPIYAVGDIYNQS-QYYLASYADKIYLAPDGAVMLKGYSAYSLYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----- 202 V+ + K+ PF +++ +A + + + ++ V+ +R + + Sbjct: 195 VNTHVFRVGTYKSAIEPFVRDDMSKEAKESASRWLGQLWGAYIDDVATNRQLASETLNPD 254 Query: 203 -----KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 K L ++G + + VGL+D + +++V + L + Sbjct: 255 MDTFLKLLKQNNGD--LASLSLNVGLVDQLATRQQVRKDLIEV 295 >gi|167581132|ref|ZP_02374006.1| peptidase, U7 family protein [Burkholderia thailandensis TXDOH] Length = 305 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 20 RIFFRFAFLAVLGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTALD 79 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 80 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 139 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 140 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLHTSGENKGFFDPFSPETPKMD 199 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 200 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDSVAR 259 Query: 236 SLYA 239 + Sbjct: 260 DVLK 263 >gi|15668832|ref|NP_247635.1| protease IV SppA [Methanocaldococcus jannaschii DSM 2661] gi|3915936|sp|Q58067|Y651_METJA RecName: Full=Putative protease MJ0651 gi|2826302|gb|AAB98642.1| protease IV (sppA) [Methanocaldococcus jannaschii DSM 2661] Length = 311 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIE---------------DSQELIERIERISRD 63 L V+ S + +A++ + +I D++ I ++ + +D Sbjct: 23 ILLVMSLSGENVDLFGGEKIAKVYLCNEIYFDYNQGDGIFPQQKKDARYYINLLDDLEKD 82 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 DS +++ ++SPGG A E + R ++++ +KPV+ V + AS Y++S ++ IVA Sbjct: 83 DSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLDASGAYMVSAPADYIVA 142 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S+VGSIGV + + KLG+++ ++K+ K SPF + + + +Q +++ Sbjct: 143 EKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGSPFRPMTKEEKEYLQKMIN 202 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +Y FV+ V+E R++ + TL ++DG+I++G +AKKVGL+D VG +E+ + L L + Sbjct: 203 ETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVDEVGTEEDALKKLEQLA-N 261 Query: 244 QSIRKIKDWNPPKNYWFCDLK 264 S +I ++ +N L Sbjct: 262 VSNPEIVEYGLEENKGLFGLT 282 >gi|71278898|ref|YP_269300.1| signal peptide peptidase SppA, 67K type [Colwellia psychrerythraea 34H] gi|71144638|gb|AAZ25111.1| signal peptide peptidase SppA, 67K type [Colwellia psychrerythraea 34H] Length = 637 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 13/252 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGG 78 + E + VA I +G I D + + + +D A+++ + SPGG Sbjct: 326 AELAEKSHDKVAIIVAKGTILDGTQKPGTIGGDSTAKLLRKARNNDDVKAVVLRVDSPGG 385 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SAYA E I + ++ +K KPV+ + AAS GY IS ++ I AA +++ GSIG+ Sbjct: 386 SAYASEIIRQEVELLKKAGKPVVASMGTYAASGGYWISAPADKIYAAPSTITGSIGIFGM 445 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L K+G+ V ++ + SP + P + Q ++ Y F++LV+ +R Sbjct: 446 MMTFEDTLSKMGIYTDGVGTTDIAGF-SPTQALTPGMANLFQLSINRGYQEFIQLVATNR 504 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPP 255 ++ ++ ++ GR+W+G +AK++GL+D +G + + L + I+ Sbjct: 505 DMTLEEVDAIAQGRVWSGKKAKELGLVDELGNLTDAVVAAATLAKLEQYDTLLIEKEQSS 564 Query: 256 KNYWFCDLKNLS 267 +N L S Sbjct: 565 RNKIMQQLLGQS 576 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 96/265 (36%), Gaps = 25/265 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS---LSSPGGS 79 + S + +D+ P V ++I+ I + +DD L++ L+ G Sbjct: 78 AFLSEAMEQQDDKPEVLL----------TDIIDVISKAKKDDRVEILVLQLQGLNRAG-- 125 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + I A++ K+ I + + + Y ++ +N I + G Sbjct: 126 LTKLQDIAAALEDFKSSGKQIIALGDQFSQDQYYLASTANDIWLNPQGFMLLDGYGRYNM 185 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 Y K L+KL ++ + K+ PF +++ A + + + + + V+ R Sbjct: 186 YFKSALEKLAINQHIFRVGTFKSAVEPFIRDDMSDAAKKANKLWLADLWMQYKEDVAARR 245 Query: 198 NIPYDKTLVLSDGRI--WTGAE------AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 D D + ++ A+ A K +D + ++E+ L L + Sbjct: 246 GFGVDNFDENIDNLVAKFSAADSSFAQYALKNNWVDQLKSRQEMRSELIELVGENKKGDS 305 Query: 250 KDWNPPKNYWFCDLKNLSISSLLED 274 + KNY ++ S+ L + Sbjct: 306 YNHIGYKNYIAATSSSIEESAELAE 330 >gi|325924321|ref|ZP_08185865.1| signal peptide peptidase SppA, 67K type [Xanthomonas gardneri ATCC 19865] gi|325545186|gb|EGD16496.1| signal peptide peptidase SppA, 67K type [Xanthomonas gardneri ATCC 19865] Length = 632 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 330 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEVKAVVLRVDSPGGEVFAS 389 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 390 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 449 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ D Sbjct: 450 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVD 509 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG +E + + +++ P + Sbjct: 510 AIDKVARGRVWSGAQAKQHGLVDAFGGMQEAVADAADRAKLSKGKFRVRYVEKPATPFSQ 569 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + + + + A P Sbjct: 570 FMSGFAGSRMGAWMLG--DSAMARAMLARSLP 599 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKFQPSGFASQ-REVAAALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWQRYLADVGTARKLTPAQLTAGIDTLPEGVTAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLTKRGVADS 305 >gi|322436182|ref|YP_004218394.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX9] gi|321163909|gb|ADW69614.1| signal peptide peptidase SppA, 36K type [Acidobacterium sp. MP5ACTX9] Length = 353 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 14/299 (4%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNS-------PHVARIAIRGQIEDSQELIE 55 F I V++ + +V+ + S D + +A I I G I D+ ++ Sbjct: 58 FWPSIILGSIVVVVGLFGAIVWSAAKSLGGDTTATTTFATSEIAVIDIDGVILDADKVDS 117 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYL 113 ++ + D S A+I+ ++SPGG A A + I+ + +V+ K ++ V + AS Y Sbjct: 118 QLRKFGDDSSVKAIILHINSPGGGAAASQEIYHEVLRVRQEKHKKIVASVESVGASGAYY 177 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A + I A + S+VGSIGV+ ++ + + + + +K P ++ PK Sbjct: 178 IASACDKIYANQASVVGSIGVIMEWTNYGDLMKWAKLKPVVIHAGELKDAGDPSRDMTPK 237 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q + D+ Y FVR V+ R+ +K L+ G++WTG ++ +GLID +GG Sbjct: 238 EAAYFQALTDNMYGQFVRDVAAGRHTSTEKIQPLATGQVWTGEQSLPLGLIDKIGGFRVA 297 Query: 234 W-QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + + +G+ +K + K L + L + L+ G + +W Sbjct: 298 LMDTAHDVGISGEPAIVKPNSAKKG--LAGLLSGEGDDLFPNPTKLLDHA--PGFYFMW 352 >gi|2129226|pir||C64381 proteinase IV (EC 3.4.-.-) - Methanococcus jannaschii Length = 315 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 128/216 (59%), Gaps = 1/216 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D++ I ++ + +DDS +++ ++SPGG A E + R ++++ +KPV+ V + A Sbjct: 72 DARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLDA 131 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y++S ++ IVA + S+VGSIGV + + KLG+++ ++K+ K SPF Sbjct: 132 SGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGSPFR 191 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + +Q +++ +Y FV+ V+E R++ + TL ++DG+I++G +AKKVGL+D VG Sbjct: 192 PMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVDEVG 251 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 +E+ + L L + S +I ++ +N L Sbjct: 252 TEEDALKKLEQLA-NVSNPEIVEYGLEENKGLFGLT 286 >gi|300716991|ref|YP_003741794.1| Protease IV [Erwinia billingiae Eb661] gi|299062827|emb|CAX59947.1| Protease IV [Erwinia billingiae Eb661] Length = 618 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 119/272 (43%), Gaps = 22/272 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQELIE---------RIERISRDDSATALIVSLSSPGGSAYA 82 ++A I G I D E I D A++ ++SPGGS A Sbjct: 322 GSTDGNIAVIMASGAIMDGDETAGSVGGDTTAMEIREARLDPKIKAIVFRVNSPGGSVTA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + K KPV+ + MAAS GY IS +N I+A+ ++L GSIG+ V Sbjct: 382 SETIREELAAAKEAGKPVVVSMGGMAASGGYWISTPANYIIASPSTLTGSIGIFGVINTV 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD +GV V +SP+ S + P+ QMMQ +++ Y F+ LV+ SRN Sbjct: 442 ENTLDSIGVHTDGVSTSPLADI-STTKALPPEVQQMMQMSIENGYKNFLGLVAHSRNKTP 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ ++ G +WTG +AK GL+D +G ++ L + K W+ Sbjct: 501 EQIDQIAQGHVWTGTDAKANGLVDAMGDFDDAVAKAAELAKLKDA---------KLSWYQ 551 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 D N LL + + + + W P Sbjct: 552 DDPNFM--DLLFSQMDVSVRAALPETLKAWMP 581 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 110/304 (36%), Gaps = 48/304 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA--RIAIRGQIEDS-------- 50 + FV + I ++++ ++ +YF +SS P + + G + D Sbjct: 19 LNFVREFILNLFLVVLILICAGIYFQFSSSSTPAEPQKGALIVDLSGVVVDKPSVSNKLS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L G+ + I +A+ Sbjct: 79 KIGRQLLGSSSDKLKENSLFDVVDAIRQAKGDANITGMVLDLRDFAGADQPSLQYIGKAL 138 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++ ++ I + + A Y ++ +N I + V G Y K LDKL V Sbjct: 139 REFRDSGKQIYATGDSYSQAQYYLASFANKIYLSPQGTVDLHGFATNGLYYKSLLDKLKV 198 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 S + K+ PF +++P A + + ++ VS +R I ++ + Sbjct: 199 SSHVFRVGTYKSAVEPFLRDDMSPAARDADSRWIGELWQNYLNTVSANRQITPEQLFPGA 258 Query: 209 DGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWN 253 G + G + AK L+D + + V Q L + D I D+ Sbjct: 259 QG-VLDGLQKVGGDTAVYAKDSKLVDELASRSLVDQQLTKIFGWDKQAKDYKGTSIYDYQ 317 Query: 254 PPKN 257 N Sbjct: 318 VKDN 321 >gi|312882482|ref|ZP_07742223.1| protease IV [Vibrio caribbenthicus ATCC BAA-2122] gi|309369882|gb|EFP97393.1| protease IV [Vibrio caribbenthicus ATCC BAA-2122] Length = 616 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 11/239 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 S + ++ N+ +A + G I D + + + D A+++ + SP Sbjct: 315 SMAPKLQYNNDDIAVVVASGAIMDGSQPRGTVGGDTVAALLRQARNDKKVKAVVLRVDSP 374 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I +Q +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 375 GGSAFASEVIRNEVQALKAEGKPVVVSMSSLAASGGYWISMSADSIVAQPTTLTGSIGIF 434 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L+KLG+ V +SP + ++ A Q +Q +D Y F+ LVS+ Sbjct: 435 SIITTFEKGLNKLGIYTDGVGTSPFSGVG-LTTGLSEGASQALQMGIDHGYQRFISLVSQ 493 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 SR +P DK +++GR+WTG +A K+GL+D +G ++ L + P Sbjct: 494 SRQLPIDKMEGIAEGRVWTGEDALKLGLVDKIGDFDDAVALAAQLAKLEKYNLYWVEEP 552 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 100/281 (35%), Gaps = 53/281 (18%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + + +L+L + VY S + + A + + G I + Sbjct: 21 FIRRALVNMIFLLTLGAIYFVYTSADAPKKSVPEKSALVLNLSGPIVEQSSYINPMDSVT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL------SSPGGSAYAGEAIFRAI 90 ++++ I D ++++L + I +AI Sbjct: 81 GSILGQDMPHENLLFDIVDTIRHAKEDPKIGGIVLALRDLAPTN-----LTKLRYIAKAI 135 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K+ KPV V +M + Y ++ ++ + A V G Y K L+KL Sbjct: 136 NEFKSSGKPVYA-VGDMYNQSQYYLASYADKVYLAPDGAVMLKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--- 204 V+ + K+ PF +++P A + + + +V V+ +R + + Sbjct: 195 VNTHVFRVGTYKSAVEPFLRDDMSPAAKETTSRWLSQLWDAYVDDVANNRQLAPETLKLN 254 Query: 205 --LVLS-----DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 L+ G A + +GL+D + ++++ L Sbjct: 255 MEEFLALLKQNQGN--LAALSLNLGLVDQLATRQQIRTELA 293 >gi|284037297|ref|YP_003387227.1| signal peptide peptidase SppA, 67K type [Spirosoma linguale DSM 74] gi|283816590|gb|ADB38428.1| signal peptide peptidase SppA, 67K type [Spirosoma linguale DSM 74] Length = 589 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 10/243 (4%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 S +A I G I+ S+ ++E + + DD A+++ ++S GGSA A Sbjct: 302 GTGSSRIAVIVASGDIQSGKSGENSIGSETIVEELRKARLDDKVKAIVLRVNSGGGSALA 361 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++R +Q + KPVI + + AAS GY + + IVA ++ GSIGV + Sbjct: 362 SDVMYREVQLARKSKPVIGSMSDYAASGGYYMLMGCDKIVAQPNTITGSIGVFSLLFNTE 421 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 F DKLGV+ VK++ P+ E+ P Q MQ + Y F + R +P Sbjct: 422 NFFKDKLGVTYDRVKTNTNADFPTGTHEMTPFQKQTMQRATERIYAEFTGKAAAGRKLPI 481 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 D ++ GR+WTG++ K +GL+D +GG ++ + + + P K +F Sbjct: 482 DSLRAIAGGRVWTGSQGKALGLVDQLGGLDDAVKLAAQTAKLKEGDYKLKYQPRKKEFFE 541 Query: 262 DLK 264 L Sbjct: 542 QLM 544 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 27/266 (10%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------------- 51 + + L L+ L S V ++ + IE+ Sbjct: 17 LFSFVGFLLLIGLGTALSSSDKKTTVKENTVLKLDLDKPIEERSVDNPFKGFGPISGGGD 76 Query: 52 -----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHE 105 EL + ++ DD + + SP + E I A+ K K V Sbjct: 77 AIGLIELKQTLKEAKDDDKIKGIYLQTESPAAGWASLEEIRNALIDFKQSKKFVYAYAET 136 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 M Y I+ ++ I + G+ + + K LDKLG+ + K K+ Sbjct: 137 MTEKG-YYIASVADKIYLNPAGDLEWNGLNAELSFFKGTLDKLGIKPEIFKVGEFKSAVE 195 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVG 222 PF +++ + + ++S + +++SRN+ D +D I A+A + Sbjct: 196 PFIREDMSDPNRKQVNSFLNSVNDHMLVRIAQSRNLRVDSLKRYADNLTIQKPADALRTK 255 Query: 223 LIDVVGGQEEVWQSLYA-LGVDQSIR 247 L+ +G Q+E+ + LGVD+ + Sbjct: 256 LVTNIGYQDELESVIKKQLGVDEKKK 281 >gi|78049494|ref|YP_365669.1| protease IV [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037924|emb|CAJ25669.1| protease IV [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 633 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 13/272 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEVKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 451 RALDKIGVHTDGVATTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFC 261 ++ GR+W+GA+AK+ GL+D GG E + + +++ P + Sbjct: 511 AIDKVARGRVWSGAQAKERGLVDAFGGMSEAVADAADRAKLSRGKFRVRYVEKPATPFSQ 570 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + S + L + L A P Sbjct: 571 FMSGFAGSRMGAWM--LSDSGMARALLARSLP 600 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + A+QK++ I E + Sbjct: 99 RDLVRVIEAAGKDRKIERVLLNLDKLQPSGFASQ-REVAVALQKLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ +H ++ V +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWHRYLADVGTARKLSPAQLAAGIDTLPEGVAAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +EEV L GV S Sbjct: 274 LAKFALQQKLVDGLKTREEVDALLVKRGVADS 305 >gi|304396127|ref|ZP_07378009.1| signal peptide peptidase SppA, 67K type [Pantoea sp. aB] gi|304356496|gb|EFM20861.1| signal peptide peptidase SppA, 67K type [Pantoea sp. aB] Length = 620 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 12/271 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATAL 69 ++++ +S ++A + G I D +E +I D A+ Sbjct: 311 SVSIYDYSVKPAGSQQDGNIAVVMASGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAI 370 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++SPGGS A EAI + + KP++ + MAAS GY IS ++ IVA ++L Sbjct: 371 ILRVNSPGGSVTASEAIREELAAAQAAGKPIVVSMGGMAASGGYWISTPASYIVANPSTL 430 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ ++ LD +GV V +SP+ S + + QMMQ +++ Y Sbjct: 431 TGSIGIFGVINTLENSLDSIGVHTDGVATSPLADI-STTKALPAEVQQMMQLTIENGYRN 489 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIR 247 FV LV++SR+ ++ ++ G +WTG++AK GL+D +G ++ + L VD+ + Sbjct: 490 FVGLVAKSRHKTPEQIDAIAQGHVWTGSDAKANGLVDALGDFDDAVKKAGELAKVDKPML 549 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 +P N S+ ++L DT+ Sbjct: 550 SWYQDDPSFLDMMLSQMNASVQAVLPDTLKA 580 Score = 85.6 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 80/200 (40%), Gaps = 13/200 (6%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D + +++ L GG + + + +A+++ ++ KP+ + + + Sbjct: 100 DVVDAIRQAKGDSNIKGIVLDLREFAGGDQPSLQYVGKALREFRDSGKPIYA-LGDSYSQ 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ + I + V G Y K LDKL V+ + K+ PF Sbjct: 159 AQYYLASYATKIYLSPQGGVDLHGFATNGLYYKTLLDKLKVTSHVFRVGTYKSAVEPFLR 218 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A V + ++ V+ +R I ++ + I T A Sbjct: 219 DDMSPAARDADSRWVGQLWQNYLNTVAANRQITSEQLFPGAAAIIAGLNAVKGDTAQYAL 278 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 L+D +G + + L Sbjct: 279 DNKLVDTLGSRAAADEELIK 298 >gi|239947709|ref|ZP_04699462.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921985|gb|EER22009.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] Length = 304 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 155/297 (52%), Gaps = 15/297 (5%) Query: 6 KKIKTRYV---MLSLVTLTVVYFSWSS--------HVEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R + + +++ + +V+ H+ N ++A + I I + ++ Sbjct: 12 RQIKSRLLIWKLAAIILIAIVFLLVGKDFAPKEVLHINSNEDYIASVLIDEIILEDEKRD 71 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + +AAS GYLI Sbjct: 72 KKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNILRKISEKKPVVIVMGTIAASGGYLI 131 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + IV+ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 132 SLGGDYIVSHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + + ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 192 RVAIMENIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTAL 251 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + +KD+ D+ I + P + G+ A++ Sbjct: 252 KWLQEVKKINVNLLVKDYQLKPKPKLMDI----ILEDFDSITPSFFKNSFNGIKAIF 304 >gi|86608463|ref|YP_477225.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557005|gb|ABD01962.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] Length = 268 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 127/244 (52%), Gaps = 5/244 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + RI + G I+ + +++ ++ + + A+++ + SPGG+ + I+ A+ +++ Sbjct: 13 QIGRIEVAGAIDGKTRERVLKALKEVEEN-QIPAVVLRIDSPGGTVADSQEIYNALLRLR 71 Query: 95 NRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 +K ++ +AAS G I+ + IVA ++ GSIGV+ + ++ LDK+G+S Sbjct: 72 EKKGTRIVASFGNIAASGGVYIAMGAEKIVANPGTITGSIGVIIRGNNIERLLDKVGISF 131 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ P+ ++Q+++D +Y FV+ V+ +R + + +DGRI Sbjct: 132 KVIKSGPYKDILSFDRELTPEERNILQELIDITYGQFVQTVAAARKLSLNVVKTFADGRI 191 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 ++G +A +G++D +G +E+ L + K D P + W L + L Sbjct: 192 FSGEQALHLGVVDRLGTEEDARLWAAELAGLPTDAKFYDLLPRRRGWSRFLPAAEALARL 251 Query: 273 EDTI 276 + + Sbjct: 252 QFEV 255 >gi|115379446|ref|ZP_01466546.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|310821059|ref|YP_003953417.1| peptidase s49, protease iv [Stigmatella aurantiaca DW4/3-1] gi|115363555|gb|EAU62690.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|309394131|gb|ADO71590.1| Peptidase S49, protease IV [Stigmatella aurantiaca DW4/3-1] Length = 592 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 9/252 (3%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLS 74 Y ++ +A + G+I + + + + ++ D+ A+++ ++ Sbjct: 295 YADLEVRSKEGKNRIAVVYAEGEIVNGEGRPSQTGGDRISRELRKLRLDEDVKAVVLRVN 354 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA A + I R + + KPV+ + AAS GY IS + I A T++ GSIGV Sbjct: 355 SPGGSASASDLIQREVIVTRKVKPVVISMGSYAASGGYWISTYGDRIFAQPTTITGSIGV 414 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 P V+ + G++ SV+++ M + + +Q +VD Y F+ V+ Sbjct: 415 FGMLPNVQKLANTHGITFDSVQTAKMANPATLARPKTEAELARIQHMVDRIYEQFLSKVA 474 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R +P ++ ++ GR+W+G EA+K+GL+D VGG ++ + + + + Sbjct: 475 EGRKLPRERVHEIAQGRVWSGEEARKLGLVDEVGGLQDAVKFAAEQAGVGNDYWMDLPDA 534 Query: 255 PKNYWFCDLKNL 266 PK ++++ Sbjct: 535 PKPLLQQLMESM 546 Score = 97.9 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 83/201 (41%), Gaps = 14/201 (6%) Query: 58 ERISRDDSATALIVSLS-SP---GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG-- 111 ++ + D+ L + + +P G A + AI + K +KPV+ + G Sbjct: 89 DKAAEDERIVGLFLIGNITPVGYGSGPAALRELRAAILRFKAKKPVLAYNVDW----GKH 144 Query: 112 -YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ A++ +V + G++ + + K G+ ++ + K+ PF + Sbjct: 145 DYYLASAASTLVVNPAGHLEVSGLVSEPVFFADAFQKYGIEVQVTRVGRYKSAVEPFILN 204 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVV 227 ++ + + MQ ++D + + V R P + ++D + I EA GL+D V Sbjct: 205 RMSDPSREQMQKLLDDLWAEWKANVGVDRKQPPEAIQAVADEKGILEPEEALAAGLVDRV 264 Query: 228 GGQEEVWQSLYALGVDQSIRK 248 +E+ + L L K Sbjct: 265 AAFDEILEELKTLAGTDDKEK 285 >gi|294651086|ref|ZP_06728423.1| signal peptide peptidase SppA [Acinetobacter haemolyticus ATCC 19194] gi|292823035|gb|EFF81901.1| signal peptide peptidase SppA [Acinetobacter haemolyticus ATCC 19194] Length = 340 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 27/301 (8%) Query: 5 LKKIKTRYVMLSLVTLT--VVYFSWSSHVEDNSPHVARIAIRGQIE--------DSQELI 54 K + Y++ L+ + S + S H+A + I G I+ +S + Sbjct: 47 FKFLGFAYLLFVLIAMGKGCSTSSTKTTTNITSDHLAVVDIIGTIDSSSGSSTVNSDDTN 106 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAG 111 + ++R + A+ ++++SPGGS + I++ I+ +K + P V + +M AS Sbjct: 107 KALKRAFEASGSKAVALNINSPGGSPVQSDEIWQEIRYLKKQHPDKKVYAVIGDMGASGA 166 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ S K S ++ Sbjct: 167 YYIASAADEIIVNPSSLVGSIGVIMPNYDLSGLAQKLGIEDRTLTSGSNKDILSMTKPLD 226 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P Q +Q V+D+ + F+ V E R + G WTG +A +G+ D G Sbjct: 227 PAQKQHVQSVLDNVHAHFINAVKEGRGKRLKSNDPAIFSGLFWTGEQAVALGVADRSGSM 286 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL------SISSLLEDTIPLMKQTKV 284 + + L ++ + D+ +N + L + ISS L D + + K+ Sbjct: 287 TTLMRDL-------NVSQKVDYTVQRNPFESILGRMGAKIGEGISSSLADQLQTQQNAKI 339 Query: 285 Q 285 Q Sbjct: 340 Q 340 >gi|67459158|ref|YP_246782.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] gi|67004691|gb|AAY61617.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] Length = 304 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 155/297 (52%), Gaps = 15/297 (5%) Query: 6 KKIKTRYV---MLSLVTLTVVYFSWSSH--------VEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R + + +++ + +V+ + N ++A + I I + ++ Sbjct: 12 RQIKSRLLIWKLAAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRD 71 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + MAAS GYLI Sbjct: 72 KKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNILRKISEKKPVVIVMGTMAASGGYLI 131 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + I++ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 132 SLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + + ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 192 RVAIMENIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTAL 251 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + + +KD+ D+ I + P + G+ A++ Sbjct: 252 KWLQEVKKINANLLVKDYQLKPKPKLIDI----ILEDFDSIAPSFFKNSFNGIKAIF 304 >gi|156934334|ref|YP_001438250.1| protease 4 [Cronobacter sakazakii ATCC BAA-894] gi|156532588|gb|ABU77414.1| hypothetical protein ESA_02165 [Cronobacter sakazakii ATCC BAA-894] Length = 616 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 14/268 (5%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSL 73 +Y + + +A + G I D +E +I D A+++ + Sbjct: 311 IYDYPVNKPSEQGESIAVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIVLRV 370 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + + K KPV+ + MAAS GY IS +N IVA ++L GSI Sbjct: 371 NSPGGSVTASETIRQELAAAKEAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSI 430 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ V+ LD +GV V +SP+ AE S + P+ ++MQ +++ Y F+ L Sbjct: 431 GIFGVINTVENSLDAIGVHTDGVATSPL-AEVSVTKALPPEVQKLMQLTIENGYQRFIGL 489 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++SRN + ++ G +WTG +AK+ GL+D +G ++ + L +S + + Sbjct: 490 VAQSRNKTPQQIDQIAQGHVWTGEDAKQNGLVDSLGDFDDAVKKAAELAKLKS-WHLDFY 548 Query: 253 NPPKNYWFCDLKNL--SISSLLEDTIPL 278 + + NL S+ ++L + Sbjct: 549 QDEPGFIDMVIANLTGSVHAMLPQALQA 576 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 88/222 (39%), Gaps = 17/222 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T +++ L G+ + I +A+++ ++ KPV + + + Sbjct: 97 DIVNAIRQAKDDRNITGIVLDLKDFAGADQPSMQYIGKALREFRDAGKPVYA-IGDSYSQ 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K LDKL V+ + K+ PF Sbjct: 156 GQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLKVTTHVFRVGTYKSAVEPFIR 215 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A + + + ++ ++ +R +P + + I T A Sbjct: 216 DDMSPAAREADSRWIGELWQNYLGTIAANRQVPASQIFPGAQAMIAGLEAAGGDTAKYAL 275 Query: 220 KVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPPKN 257 L+D + V ++L D+ R + ++ P N Sbjct: 276 DNKLVDELASSATVDKALVKQFGWSDKDKDFRAVSIYDYPVN 317 >gi|107022191|ref|YP_620518.1| peptidase S49 [Burkholderia cenocepacia AU 1054] gi|116689137|ref|YP_834760.1| peptidase S49 [Burkholderia cenocepacia HI2424] gi|170732425|ref|YP_001764372.1| peptidase S49 [Burkholderia cenocepacia MC0-3] gi|254245930|ref|ZP_04939251.1| Periplasmic serine protease (ClpP class) [Burkholderia cenocepacia PC184] gi|105892380|gb|ABF75545.1| peptidase S49 [Burkholderia cenocepacia AU 1054] gi|116647226|gb|ABK07867.1| peptidase S49 [Burkholderia cenocepacia HI2424] gi|124870706|gb|EAY62422.1| Periplasmic serine protease (ClpP class) [Burkholderia cenocepacia PC184] gi|169815667|gb|ACA90250.1| peptidase S49 [Burkholderia cenocepacia MC0-3] Length = 330 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS S + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLGVFVLLAFALIDFSSDSKFSSSGRHTALVTIDGEIAAGVNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTVGVVLRINSPGGSPVQAGMVYDEIRRLRGKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|295398025|ref|ZP_06808081.1| U7 family peptidase [Aerococcus viridans ATCC 11563] gi|294973783|gb|EFG49554.1| U7 family peptidase [Aerococcus viridans ATCC 11563] Length = 362 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 14/257 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPG 77 D + VA + I G I D+ Q +++ IE I +D+ AL+++++SPG Sbjct: 71 ETGDTNRQVAVLEIDGTIADNSGSGAFSEGMDYQGILDAIEGIKENDNIQALLLTVNSPG 130 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G Y ++ A+ +K + P+ + +MAAS GY+IS + I + GSIGV+ Sbjct: 131 GGVYESTELYNALLDLKESREIPIYVSMGQMAASGGYMISMVGDQIYTDSETTTGSIGVI 190 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q P F+++ G+++ + KS +K S F + + ++ + Y+ FV +V+ Sbjct: 191 MQVPNFSGFMEEHGLAMDTYKSGALKDMGSSFRGASDEEKNVLNSFIQEKYNRFVEIVAN 250 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + D L+DGRI++G++A + GL D +G +E+ +L A ++ + Sbjct: 251 GRGMSTDDVKKLADGRIYSGSQAVENGLADQIGYEEDALAALRADNNLETATVVDYSPTS 310 Query: 256 KNYWFCDLKNLSISSLL 272 W D +L L Sbjct: 311 ATSWLTDFMSLLAEKNL 327 >gi|37526445|ref|NP_929789.1| protease 4 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785876|emb|CAE14927.1| protease IV (endopeptidase IV) (signal peptide peptidase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 621 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 22/271 (8%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 + ++A I +G I D Q+ +I + DD+ A+I+ ++SPGGS A Sbjct: 326 SSKGNIAVIVAQGAIVDGQQTQGMVGGDTTAAQIRQARLDDNIKAVILRVNSPGGSVSAS 385 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I + ++ KPV+ + MAAS GY I+ +N I+A +++L GSIG+ + Sbjct: 386 DVIRTELAALRATNKPVVVSMGGMAASGGYWIATPANYIIANQSTLTGSIGIFGVITTYE 445 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+ +G+ V ++P+ S ++ + +MQ +++ Y+ F+ LV+ SR+ + Sbjct: 446 NSLEHIGIHTDGVSTTPLAGI-SVTKGLSKEFSALMQLNIENGYNNFIGLVATSRHKTRE 504 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + ++ G +W G +AK GL+D +G ++ L + P+ W Sbjct: 505 EVDNIAQGHVWIGHDAKTNGLVDQLGDFDDAVTKAAELAKLDN---------PELDWMQ- 554 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 +S S LL + Q V W P Sbjct: 555 -PEMSFSELLMSQLTTTAQAIVPEAVQAWLP 584 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 99/268 (36%), Gaps = 42/268 (15%) Query: 1 MEFVLKKIKTR-YVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQIEDS-------- 50 + F+ + I ++ML LV + ++ +S A + + G I D Sbjct: 19 LNFIREVISNLIFIMLILVVVGSFLLYQQTNKTADSYQGALYVNLTGVIVDQVSNRTPLT 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D+ T L++ L G+ + I +AI Sbjct: 79 QLGRELFGTSSNKFQENSLFDIVDSIRQAKTDNKITGLVLKLDDFIGADQPSMQYIGKAI 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K KPV S Y ++ ++ I + VG G Y K LD L Sbjct: 139 NEYKTSGKPVYAISDSYNQS-QYYLATFADKIYLSPQGTVGLYGYSTNSLYYKSLLDSLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--- 204 V+ + K+ P +++P A + ++ +H ++ V+ +R + D+ Sbjct: 198 VTAHIFRVGTYKSAVEPVMRDDMSPAAREADSRWINGLWHNYLNTVATNRKLTVDQVFPG 257 Query: 205 --LVLSDGRIWTG---AEAKKVGLIDVV 227 +++ R G A K L+D V Sbjct: 258 ANEMIASLRAVGGDNAQYALKHKLVDYV 285 >gi|300951371|ref|ZP_07165213.1| signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|300958660|ref|ZP_07170784.1| signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|301647962|ref|ZP_07247737.1| signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|331642370|ref|ZP_08343505.1| signal peptide peptidase SppA, 67K type [Escherichia coli H736] gi|300314711|gb|EFJ64495.1| signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|300449361|gb|EFK12981.1| signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|301073933|gb|EFK88739.1| signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|331039168|gb|EGI11388.1| signal peptide peptidase SppA, 67K type [Escherichia coli H736] Length = 666 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|294789451|ref|ZP_06754688.1| signal peptide peptidase SppA, 36K type [Simonsiella muelleri ATCC 29453] gi|294482664|gb|EFG30354.1| signal peptide peptidase SppA, 36K type [Simonsiella muelleri ATCC 29453] Length = 335 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 32/295 (10%) Query: 14 MLSLVTLTVVYFSWSS-----HVEDNSPHVARIAIRGQIEDSQE------LIERIERISR 62 +L V++ S + + H A I + G I +++ L + +E + Sbjct: 56 VLMFVSIMASAMKGSPENRQHQIATHKEHTAVINLTGVIGGNEDVNHVEILRDGLEEAFK 115 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCASN 119 + A A+I+ +SPGGS F+ + ++K KPV + +M AS Y I+ A++ Sbjct: 116 NKHAKAIIIHANSPGGSPVVSNVAFQEVMRLKNMEKTKPVYVVIGDMCASGCYYIASAAD 175 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A +SLVGSIGV+ +DKLGV + + K PFS P+ V + Q Sbjct: 176 KIYADPSSLVGSIGVIGSSFDATGLMDKLGVKRRQRIAGNNKGMGDPFSPETPEQVAIWQ 235 Query: 180 DVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +++ + F++ V R + + L GR++TG E+K VGLID G V + + Sbjct: 236 QMLNQIHAEFIKAVKLGRGNKLKEQQNPDLFSGRVYTGLESKNVGLIDEFGNVYSVARDV 295 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG-LWAVW 291 K+ D+ P +N ++SL+ + TK++ L +VW Sbjct: 296 V------KAPKLVDYTPEQN---------DLASLISRGLGAKMNTKLESWLNSVW 335 >gi|237731223|ref|ZP_04561704.1| protease 4 [Citrobacter sp. 30_2] gi|226906762|gb|EEH92680.1| protease 4 [Citrobacter sp. 30_2] Length = 618 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 V Y+ +S D + + G I D +E +I D A++ Sbjct: 310 AVSYYDYSLKTPADTGDSIGVVFANGAIMDGEETPGNVGGDTTAAQIREARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 370 LRVNSPGGSVSASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDSIGVHTDGVATSPLADI-SITKALPPEVQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 489 ITLVADARKTTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHI 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + + + ++S S ++L + I M + Sbjct: 548 EYYQDEPTFVDMVMDSMSGSVRAMLPEAIQAMLPAPL 584 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 115/303 (37%), Gaps = 56/303 (18%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS-------- 50 + FV + + ++ L LV + + SS+ +++ A + I G I D Sbjct: 19 LNFVREFVLNLFFIFLVLVGVGIWMQVSSSNTSEHAERGALLLDISGVIVDKPSSTSRLS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 +++ I + D + T +++ L + G+ + I +A+ Sbjct: 79 VIGRQLFGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGADQPSMQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLD 146 ++ ++ KPV V + + Y ++ +N I + GS+ G Y K LD Sbjct: 139 REFRDSGKPVFA-VGDNFSQGQYYLASFANKIYLSPQ---GSVDLHGFATNGLYYKSLLD 194 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 KL VS + K+ PF +++P A + + + ++ V+ +R IP + Sbjct: 195 KLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLDTVAANRQIPAQQV 254 Query: 205 LVLS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIK 250 + DG T A L+D + EV + L D++ R + Sbjct: 255 FPGAQAMLDGLTKVDGD--TAKYALDNKLVDALASSAEVEKMLTKQFGWSKADKNYRAVS 312 Query: 251 DWN 253 ++ Sbjct: 313 YYD 315 >gi|82702195|ref|YP_411761.1| peptidase S49 [Nitrosospira multiformis ATCC 25196] gi|82410260|gb|ABB74369.1| Peptidase S49 [Nitrosospira multiformis ATCC 25196] Length = 316 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 127/273 (46%), Gaps = 10/273 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSA 66 ++ L ++ + + S + + H A + +RG I ++ + +++ +D Sbjct: 42 FIWLFILLFFGLGWFGDSSMSISGKHTALVDLRGVISPDSISSAENITAGLQQAFKDAKT 101 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 +I+ ++SPGGS I I++++ P + V ++ AS GY ++ A++ I Sbjct: 102 QGVILRINSPGGSPVQAGYINDEIRRLRAEYPEIPLYAVVEDICASGGYYVAVAADKIYV 161 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + S++GSIGVL ++KLG+ + + + KA PFS N + + + ++ Sbjct: 162 DKASIIGSIGVLINGFGFTKAMEKLGIERRLITAGENKAFLDPFSPNNREQEEYAKKMLG 221 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-- 241 + F+++V + R + + G++WTG ++ ++GL D +G E V + + Sbjct: 222 DIHEQFIQVVQQGRGERLKEKPEIFSGKVWTGQKSVELGLADGMGSAEYVAREIIKAEHI 281 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 VD + R+ K + + LS + + Sbjct: 282 VDYTTREGVAERLAKRFGGVLAETLSGLGMSAE 314 >gi|15604382|ref|NP_220898.1| protease IV (sppA) [Rickettsia prowazekii str. Madrid E] gi|3861074|emb|CAA14974.1| PROTEASE IV (sppA) [Rickettsia prowazekii] gi|292572137|gb|ADE30052.1| Signal peptide peptidase SppA 36K type [Rickettsia prowazekii Rp22] Length = 305 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 138/263 (52%), Gaps = 4/263 (1%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 + N ++A + I G I + ++ +++++I D ALIV+++SPGG+ E I+ Sbjct: 47 SINSNEDYIASVLIDGIILEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNI 106 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q V KLG Sbjct: 107 LRKISAKKPVVVIMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLG 166 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + KS KA P+P ++ + + ++ +Y +F+ LVSE R++P ++ L+D Sbjct: 167 IKFNNFKSGAFKAVPNPTEKLTEAVRLAIMENIEDTYKFFIELVSERRSLPIEEVQKLAD 226 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR+++G +A K+ L+D +G ++ + L + IKD+ ++ + Sbjct: 227 GRVYSGRQALKLRLVDTIGSEDTALKWLQEIKKININLTIKDYQLKPKSTLIEMIFEDFN 286 Query: 270 SLLEDTIPLMKQTKVQGLWAVWN 292 SLL + G+ +V+ Sbjct: 287 SLLLS----FFKNSFSGIKSVFQ 305 >gi|89900513|ref|YP_522984.1| peptidase S49 [Rhodoferax ferrireducens T118] gi|89345250|gb|ABD69453.1| peptidase S49 [Rhodoferax ferrireducens T118] Length = 356 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 14/286 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIE 58 I+ ++ ++ +V + PH A + I+G+I + ++ + Sbjct: 74 WRTFIRLAWLAFFIIVAWLVISQNGASRAALKPHTAVVEIKGEIASGADASADAIVASLR 133 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISC 116 D A A+++ ++SPGGS I + ++K + KPV V E ASA Y I+ Sbjct: 134 DAFEDAGAQAVVLLINSPGGSPVQAGIINDELHRLKAKHNKPVYAVVEETCASAAYYIAV 193 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL ++KLGV + + + K PFS K Sbjct: 194 AADKIYVDKASIVGSIGVLMDGFGFTGLMEKLGVERRLMTAGENKGFLDPFSPQTEKQRV 253 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q +++ + F+ +V R +T G W+G +A ++GL D G + V + Sbjct: 254 FAQAMLNQIHQQFIDVVKAGRGTRLKETPETFSGLFWSGQQAIELGLADQFGNLDFVARE 313 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 + I D+ +N +K +S+ + + ++ T Sbjct: 314 VV------KAEDIIDYTRRENVAERLVKRFG-ASIGQGAVRAIQST 352 >gi|118580963|ref|YP_902213.1| signal peptide peptidase SppA, 36K type [Pelobacter propionicus DSM 2379] gi|118503673|gb|ABL00156.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pelobacter propionicus DSM 2379] Length = 295 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 2/265 (0%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 + + L + V+ V + +RG I DS+E + ++ + D A+++ Sbjct: 19 LFVVSMLIARVLLGDADVKIAGNRGVGLVEVRGMILDSRETVRQLRYFLKQDEIRAVVLR 78 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I ++K RK +I + +AAS GY +S + +I A +L SI Sbjct: 79 VDSPGGVVAPSQEICEEVRKFAARKKIIVSMGSLAASGGYYVSAPATLIYANPGTLTASI 138 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + ++ +D++G+ ++K+ K SP +++ M+Q V+DS++ FVR Sbjct: 139 GVILKLSNIETLMDRIGIKSHTLKTGKYKDSGSPLRKLSEDDRAMLQSVIDSTHEQFVRA 198 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ R +P + ++DGRI +G +A + L+D +G ++ + L + ++ Sbjct: 199 VASGRKLPVQQVRRIADGRILSGEQALALKLVDRLGTLQDAIEEAGRLSGIEGEPEVV-L 257 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIP 277 P K + DL LE + Sbjct: 258 PPRKKVNYWDLLADGTEGALEKALG 282 >gi|254523187|ref|ZP_05135242.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas sp. SKA14] gi|219720778|gb|EED39303.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas sp. SKA14] Length = 663 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 12/275 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVS 72 + + D+ P VA + G+I + + D++ A+++ Sbjct: 350 LALLDARRNPVDSRPQVAVVVAEGEISGGDLPAGRIGGESTSALLRAARDDENVKAVVLR 409 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG +A E I R + ++ KPV+ + ++AAS GY IS ++ I A +++ GS Sbjct: 410 VDSPGGEVFASEQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGS 469 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG+ P LDK+GV V ++ ++P Q++Q V++ Y F Sbjct: 470 IGIFGMVPNFSRALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQTVINKGYADFTG 529 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKI 249 V+++R P + ++ GR+W+GA+AK+ GL+D GG ++ + ++ Sbjct: 530 RVADARKKPVEAVDEVARGRVWSGAQAKERGLVDAFGGLKDAVADAASRAKLGKADAYRV 589 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + + + + S + ++ Sbjct: 590 RYIEKAATPFAQFVSGFAGSRAGAWMLSDSGMARM 624 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEM 106 ++L+ IE D +++ L P G +A + A+Q ++ K ++ M Sbjct: 129 RDLLRVIESAKEDKKIERVVLELDKLQPSG--FASLREVASALQDLRASGKQLVAYSESM 186 Query: 107 AASAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 S YL++ ++ + GS+ G QY DKLGV + K K Sbjct: 187 GQS-QYLLAAQADEVYLDPM---GSVVLEGLGRYRQYF-RTGLQDKLGVDVHLFKVGEYK 241 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTG 215 + P+ +P + + ++ + ++ ++++R + + L +G G Sbjct: 242 SAAEPYVLDAASPASKEADLFWMNDVWQRYLADIAKARRLDPAQLAAGIDTLPEGIAAAG 301 Query: 216 AE----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + A + L+ + +EE + GV Sbjct: 302 GDLAKFALQQKLVTALKTREEFEDLMIERGVADD 335 >gi|219872141|ref|YP_002476516.1| protease IV, signal peptide peptidase [Haemophilus parasuis SH0165] gi|219692345|gb|ACL33568.1| protease IV, signal peptide peptidase [Haemophilus parasuis SH0165] Length = 621 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 133/269 (49%), Gaps = 17/269 (6%) Query: 22 VVYFSWSSHVED-----NSPHVARIAIRGQI---------EDSQELIERIERISRDDSAT 67 + +F +S + D +A + + G I S +++ + + DD Sbjct: 306 IDFFDYSLSLSDRFNVVGKDKIAIVNVEGAIVLGESDDEVAGSDTIVKLLRKAREDDDVR 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ ++SPGGSA A E I + ++ ++ KPV+ + MAAS GY I+ S+ I+A+ T Sbjct: 366 GVVLRINSPGGSAMASELIRQEVEDLQQAGKPVVASMGGMAASGGYWIAATSDKIIASPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + KLGV+ V +SP A+ + ++ + +++Q +++ Y Sbjct: 426 TLTGSIGIFALAVSFEKTAKKLGVNEDGVSTSPF-AQQTALKPLSKEQSELIQISIENGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LVS+ R + ++ G++W G A + GL+D +G ++ + +L L ++ Sbjct: 485 GRFLELVSKGRKMSKGDVDKVAQGQVWLGESAFEKGLVDELGDFDDAYHALTILINEKRK 544 Query: 247 RKIK-DWNPPKNYWFCDLKNLSISSLLED 274 K + + W D + IS ++ D Sbjct: 545 AKGETEIERFSTQWLIDESDDLISQVMRD 573 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 91/240 (37%), Gaps = 43/240 (17%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA------RIAIRGQIED------ 49 EFV+ + +VML + + WSS ++ V + + G + D Sbjct: 17 EFVISLVFILFVMLGFAFMAL----WSSDAANSKTPVEFSKGALLLNLDGYLADNHDEFS 72 Query: 50 --------------------SQELIERIERISRDDSATALIVSLSSP--GGSAYAGEAIF 87 + +++ I++ D+ T L++ L S GG + + Sbjct: 73 DFNRFLRSELGGRNEPIKISTFDVVRAIKKAQYDEKITGLVLDL-SYFEGGDIPSLTFVG 131 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + I++ K KPVI + Y ++ ++ I + V G+ + Y K LD Sbjct: 132 KEIERFKQSNKPVIAIGEGYSQQ-QYYLASYADKIYLNKAGFVDLHGLNYSTLYFKSLLD 190 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+ V + K+ PF +++ +A Q Q + + F ++++R I + Sbjct: 191 KIEVVPHIFRVGTYKSAVEPFLRDDMSAEARQNAQLWLSQLWANFSSAIAKNRQIDANTI 250 >gi|327252883|gb|EGE64537.1| signal peptide peptidase SppA, 67K type [Escherichia coli STEC_7v] Length = 618 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVVTTVENSLDSIGVHTDGVSTSPLADV-SITKALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAIGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|204927902|ref|ZP_03219103.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323244|gb|EDZ08440.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 618 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KP+ + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPIFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|168238961|ref|ZP_02664019.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736488|ref|YP_002114312.1| protease 4 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711990|gb|ACF91211.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288303|gb|EDY27688.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 618 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D S T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRSITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KP+ + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPIFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSHWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|227111464|ref|ZP_03825120.1| protease 4 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 616 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 12/267 (4%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 N+ +A + G I D +I D AL++ ++SPGGS A Sbjct: 320 AQNNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTA 379 Query: 83 GEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ Sbjct: 380 SELIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTF 439 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L+ LGV V +SP+ S + P+ QMMQ ++ Y F+ +V+++R Sbjct: 440 EDSLENLGVHTDGVATSPLAD-LSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTP 498 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYWF 260 ++ ++ G +W G++AK+ GL+D +G ++ + L + P Sbjct: 499 EQIDQIAQGHVWVGSDAKENGLVDQIGDFDDAVKKAAELAKLGQYQLNWYAEQPGLLDTM 558 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGL 287 + N S+ +LL + M V L Sbjct: 559 LNQVNASVYALLPVAVQSMLPAPVAQL 585 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 103/283 (36%), Gaps = 50/283 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ +Y + E+ + + + G + D Sbjct: 19 LNFIREFILNIFLIALILVGVGIYSQVKTTPEEATKGALLVDLTGVVVDQPTVNNKLRQL 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + DD+ T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGASNNRRQENSLFDIVDSIRQAKNDDNITGMVLDLSDFTGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 ++ KP+ S Y ++ +N + GS+ G Y K LDKL Sbjct: 139 FRDSGKPIYAVGDSYNQS-QYYLASFANTVSLTPQ---GSVDLHGFATNNLYFKSMLDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 V+ + K+ P+ +++P A +++ + ++ VS +R I + Sbjct: 195 KVTTNIFRVGTYKSAVEPYLRDDMSPAARDADGRWINALWQQYLNTVSANRQITPQQLFP 254 Query: 207 LS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G T A L+D V + QSL Sbjct: 255 GATNIIAGLQAVQGD--TARYALDNKLVDEVASRSVTEQSLVK 295 >gi|291282945|ref|YP_003499763.1| Protease 4 [Escherichia coli O55:H7 str. CB9615] gi|209768384|gb|ACI82504.1| protease IV [Escherichia coli] gi|290762818|gb|ADD56779.1| Protease 4 [Escherichia coli O55:H7 str. CB9615] gi|320658432|gb|EFX26126.1| protease 4 [Escherichia coli O55:H7 str. USDA 5905] Length = 618 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ + + Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIKNGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|300930753|ref|ZP_07146126.1| signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300461386|gb|EFK24879.1| signal peptide peptidase SppA [Escherichia coli MS 187-1] Length = 666 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 358 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 417 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 418 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 477 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 478 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLNIENGYKRF 536 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 537 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 595 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 596 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 632 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 75 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 134 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 135 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 194 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 195 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 253 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 254 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 313 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 314 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 363 >gi|198245686|ref|YP_002215831.1| protease 4 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197940202|gb|ACH77535.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623578|gb|EGE29923.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 618 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRINSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 102/282 (36%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + +NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GNNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|309788853|ref|ZP_07683448.1| signal peptide peptidase SppA, 67K type [Shigella dysenteriae 1617] gi|308923124|gb|EFP68636.1| signal peptide peptidase SppA, 67K type [Shigella dysenteriae 1617] Length = 594 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 286 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 345 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 346 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 405 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 406 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 464 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 465 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVTKAAELAKVKQ-WHL 523 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 524 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 560 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D+ Sbjct: 3 LNLFFIFLVLVGVGLWMQVSGGDSKETASRGALLLDISGVIVDNPDSSQRFSKLSRQLLG 62 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 63 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 122 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 123 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 181 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 182 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNAVAANRQIPAQQVFPGAQGLLEGL 241 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 242 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 291 >gi|330830951|ref|YP_004393903.1| signal peptide peptidase SppA, 67K type [Aeromonas veronii B565] gi|328806087|gb|AEB51286.1| Signal peptide peptidase SppA, 67K type [Aeromonas veronii B565] Length = 614 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 13/271 (4%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + V + G I D L + + RDD A+++ + SPGGSA+A Sbjct: 320 QSGKDEVGLVVASGAIMDGVQPAGTIGGDSLSDLLADARRDDQVKAVVLRVDSPGGSAFA 379 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + +K KPV+ + AAS GY IS ++ I A+ T+L GSIGV + + Sbjct: 380 AEQIRAELLALKQAGKPVVVSMGSYAASGGYWISADADKIFASPTTLTGSIGVFGMFATI 439 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + GV V ++ P + Q +Q V+ +Y F+ LVS+ R + Sbjct: 440 DKALAQFGVHTDGVGTTDYVGVG-PTRALPDHVGQAIQLSVEDTYQRFIGLVSKGRGLSP 498 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS--IRKIKDWNPPKNYW 259 ++ ++GR+WTG +AK +GL+D G ++ ++ L + + I+ K+ + Sbjct: 499 EEAEKAAEGRVWTGEDAKALGLVDEFGNLDDAIKAAAELANLKEWQVTPIEQEESTKDKF 558 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 L + S L + + L V Sbjct: 559 LRQLFDSSAQVLAPQLQSWLPAGFGKALVEV 589 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 111/282 (39%), Gaps = 60/282 (21%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-----IAIRGQIEDSQ------------ 51 TR ++++L+ L VV S + +P + + G + + + Sbjct: 20 FTRLMLVNLLFLIVVLVIVFSVSQKEAPKAPIEGALTLNLNGVLVEQRSQTDPTVQLLRQ 79 Query: 52 --------------ELIERIERISRDDSATALIVSLSSPGGSAYA----GEAIFRAIQKV 93 +L+ I+ D+ AL++ P G A + + AI Sbjct: 80 MDSSDEQPSEIVLSDLLWAIKSAKDDERIKALVIK---PQGLQGANFTKLQEVASAIDSF 136 Query: 94 KNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV---GSIGVLFQYPYVKPFLDKLG 149 + KPVI + + YL++ ++ ++ ++ V G +GV Y K L+KL Sbjct: 137 RESGKPVIA-MADFYTQGQYLLAAHADHVLLNQSGAVVIEG-LGVYQTY--FKSALEKLN 192 Query: 150 VSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----- 202 ++ K K+ P++ E++P++ + Q +D + +V V+E R I D Sbjct: 193 ITPHVFKVGTYKSFVEPYTRDEMSPESKEANQRWLDQLWQSYVADVAEQREIEPDAVAPG 252 Query: 203 -----KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + L + G A GL+D + ++E+ Q++ Sbjct: 253 KERFLELLRKAGGN--AANYALDNGLVDQLATRDEMTQAVIK 292 >gi|167552353|ref|ZP_02346106.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322985|gb|EDZ10824.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 618 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRINSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|260597600|ref|YP_003210171.1| protease 4 [Cronobacter turicensis z3032] gi|260216777|emb|CBA30223.1| Protease 4 [Cronobacter turicensis z3032] Length = 616 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 14/268 (5%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSL 73 +Y + + +A + G I D +E +I D A+++ + Sbjct: 311 IYDYPVNKPSEQGESIAVVFANGAIMDGEETPGNVGGDTTAAQIRDARLDPKVKAIVLRV 370 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + + K KP++ + MAAS GY IS ++ IVA ++L GSI Sbjct: 371 NSPGGSVTASETIRQELAAAKEAGKPIVVSMGGMAASGGYWISTPASYIVANPSTLTGSI 430 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ V+ LD +GV V +SP+ S + P+ ++MQ +++ Y F+ L Sbjct: 431 GIFGVINTVENSLDSIGVHTDGVATSPLADV-SVTKALPPEVQKLMQLTIENGYQRFIGL 489 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++SR+ + ++ G +WTG +AK+ GL+D +G ++ + L ++ + + Sbjct: 490 VAQSRHKTPQQIDQIAQGHVWTGEDAKQNGLVDSLGDFDDAVKKAAELAKLKT-WHLDFY 548 Query: 253 NPPKNYWFCDLKNL--SISSLLEDTIPL 278 + L NL S+ ++L + Sbjct: 549 QDEPGFVDMVLANLTGSVHAMLPQALQA 576 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 89/222 (40%), Gaps = 17/222 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T +++ L G+ + I +A+++ ++ KPV + E + Sbjct: 97 DIVNAIRQAKDDRNITGIVLDLKDFAGADQPSMQYIGKALREFRDAGKPVYA-IGESYSQ 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K LDKL V+ + K+ PF Sbjct: 156 GQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLKVTTHVFRVGTYKSAVEPFIR 215 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P+A + + + ++ ++ +R +P + + I T A Sbjct: 216 DDMSPEAREADSRWIGELWQNYLGTLAANRQVPASQIFPGAQAMIAGLEAAGGDTAKYAL 275 Query: 220 KVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPPKN 257 L+D + + ++L D+ R + ++ P N Sbjct: 276 DNKLVDELASSATIDKALVKQFGWSDKDKDFRAVSIYDYPVN 317 >gi|317048414|ref|YP_004116062.1| signal peptide peptidase SppA, 67K type [Pantoea sp. At-9b] gi|316950031|gb|ADU69506.1| signal peptide peptidase SppA, 67K type [Pantoea sp. At-9b] Length = 618 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 22/267 (8%) Query: 37 HVARIAIRGQIEDSQELI---------ERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A + G I D +E +I D A+I+ ++SPGGS A EAI Sbjct: 327 NIAVVMASGAIMDGEETAGNVGGDTTAAQIRDARLDPKIKAIILRVNSPGGSVTASEAIR 386 Query: 88 RAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + KPV+ + MAAS GY IS ++ IVA ++L GSIG+ V+ L Sbjct: 387 EELAAAHAAGKPVVVSMGGMAASGGYWISTPADYIVANPSTLTGSIGIFGVINTVENSLS 446 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV V +SP+ + + + Q+MQ +++ Y FV LV+ SR+ ++ Sbjct: 447 TIGVHTDGVATSPLADVAT-TKALPTEVQQLMQLTIENGYRNFVGLVAASRHKTPEQINE 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 ++ G +WTG++AK GL+D +G ++ L P+ W+ D + Sbjct: 506 IAQGHVWTGSDAKANGLVDALGDFDDAVSKAAELAK---------ITTPQLSWYQDDPGM 556 Query: 267 SISSLLEDTIPLMKQTKVQGLWAVWNP 293 LL + + + VW P Sbjct: 557 L--DLLLNQMSASASAIMPEALKVWLP 581 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 107/279 (38%), Gaps = 44/279 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYF--SWSSHVEDNSPHVARIAIRGQIEDS-------- 50 + F+ + I ++++ ++ ++ S S E ++ + G + D Sbjct: 19 LNFIREFILNLFLIVLILAGVGIWLQVSGSGSTEPVQQGALKVDLTGVLVDKPSVSNRLS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 ++++ I + D + T +++ L GG + + + +A+ Sbjct: 79 RIGRQLLGTSSDRLQENSLFDVVDAIRQAKGDKNITGIVLDLRDFAGGDQPSLQYVGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KPV + + + A Y ++ +N + + V G Y K LDKL Sbjct: 139 REFRDSGKPVYA-IGDSYSQAQYYLASYANKVYLSPQGTVDLHGFATNGLYYKTLLDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF +++P+A + + ++ VS +R I + Sbjct: 198 VNSHVFRVGTYKSAVEPFLRDDMSPEARDADSRWIGQLWQNYLNTVSANRQITPQQLFPG 257 Query: 208 SDGRIWTGAEAKK---------VGLIDVVGGQEEVWQSL 237 + G I +G +A + L+D + + Q L Sbjct: 258 AAG-IISGLQAVQGDTAKYALNSKLVDALESRATADQEL 295 >gi|321223920|gb|EFX48983.1| Protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 618 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 13/276 (4%) Query: 21 TVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLETPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L +TI M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPETIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|225025425|ref|ZP_03714617.1| hypothetical protein EIKCOROL_02323 [Eikenella corrodens ATCC 23834] gi|224941709|gb|EEG22918.1| hypothetical protein EIKCOROL_02323 [Eikenella corrodens ATCC 23834] Length = 321 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 127/284 (44%), Gaps = 20/284 (7%) Query: 7 KIKTRYVMLSLVTLTVVYFSW---SSHVEDNSPHVARIAIRGQIEDSQ----ELIERIER 59 K+ R ++++ + L + S + PH A I + G I + +L + +E Sbjct: 39 KLIFRLLLIAFLALYLFAIFGNIGSLNPAAAGPHTAVIRLEGAITAGENQAGKLRQGLEA 98 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 ++ +I+ +SPGGS +R I++++ P V +M AS Y I+ Sbjct: 99 AYKNKQVRGIIIRANSPGGSPVVSGVAYREIRRLRAEHPGIPVYVVAEDMCASGCYYIAA 158 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A ++S+VGSIGV+ + + +G+ + + K PFS P+ Sbjct: 159 AADKIYADQSSIVGSIGVVGSSFDLTGLMHNMGIQRRQRTAGSNKGMGDPFSPETPEQTA 218 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTL--VLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + Q ++D + F++ V + R ++ L GR++TG EA K GLID +G V Sbjct: 219 IWQGMLDDIHQQFIKAVRDGRGKRLNEADNPDLFSGRVYTGNEALKTGLIDGLGDIYSVS 278 Query: 235 QSLYALGVDQSIRKIKDWNPPK--NYWFCDLKNLSISSLLEDTI 276 + + ++ D+ P + F S+ L++ + Sbjct: 279 RDII------KAPELVDYTPADDISRLFSKGVGASVRQGLQEVV 316 >gi|168244402|ref|ZP_02669334.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449756|ref|YP_002045301.1| protease 4 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408060|gb|ACF68279.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336810|gb|EDZ23574.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 618 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L +TI M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPETIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSMFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|224369572|ref|YP_002603736.1| SppA [Desulfobacterium autotrophicum HRM2] gi|223692289|gb|ACN15572.1| SppA [Desulfobacterium autotrophicum HRM2] Length = 300 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 2/259 (0%) Query: 9 KTRYVMLSLVTLTVVYFS--WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 + +++V T FS S+ + ++ + I G I S+E+ ++++ D + Sbjct: 21 FALVLTVAIVMGTSAMFSSTLSTPFNTDQGNIGIVEIVGVIASSKEVSQQLKDFREDPAI 80 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGG + I+R I K K K VI + +AAS GY + A++ ++A Sbjct: 81 KAIVLRIDSPGGGVGPSQEIYREIIKTKKIKKVIASLGSVAASGGYYAASATDAVIANPG 140 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ +Y ++ ++K+G++ +KS K SP E+ PK ++Q V D + Sbjct: 141 TITGSIGVIMEYANLQKIMEKIGLTPVVIKSGEFKDMGSPVREITPKERAILQGVADEVH 200 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FVR V+ R++ + L+DGRI+TG A + L+D +G E+ + + Sbjct: 201 QQFVRDVASGRSLEQAQVEKLADGRIYTGETALDLHLVDRLGNLEDAIAWAGEMAGIKGK 260 Query: 247 RKIKDWNPPKNYWFCDLKN 265 + F +L + Sbjct: 261 VNPVYPREKRLGIFKELVS 279 >gi|16764646|ref|NP_460261.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991889|ref|ZP_02572988.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262148|ref|ZP_03162222.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16419812|gb|AAL20220.1| protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240403|gb|EDY23023.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329812|gb|EDZ16576.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246504|emb|CBG24314.1| protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993167|gb|ACY88052.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157832|emb|CBW17326.1| protease IV [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912281|dbj|BAJ36255.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323129566|gb|ADX16996.1| signal peptide peptidase SppA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988183|gb|AEF07166.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 618 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L +TI M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPETIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|295096153|emb|CBK85243.1| signal peptide peptidase SppA, 67K type [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 618 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 14/276 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 +Y + +D+ +A + G I D +E +I D A+++ Sbjct: 311 ISMYDYAAKKPDDSGDSIAVVFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L G Sbjct: 371 RVNSPGGSVSASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ LD LGV V +SP+ S + P+ +MMQ ++S Y F+ Sbjct: 431 SIGIFGMINTVENSLDYLGVHTDGVSTSPLADV-SVTKSLPPEVSEMMQLSIESGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV++SR D+ ++ G +WTG +AK GL+D +G ++ + L + + Sbjct: 490 TLVADSRKKTPDQIDQIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELAKLKQ-WHVD 548 Query: 251 DWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + ++ + ++S S ++L D + V Sbjct: 549 YYQDEPTFFDMVMDSMSGSVRAMLPDALQAYLPAPV 584 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 107/280 (38%), Gaps = 42/280 (15%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS-------- 50 + FV + ++ L LV + +++ +S A + I G I D Sbjct: 19 LNFVRNLVMNIFFIFLVLVCAGIWMHISNANQSQHSTRGALLLDITGVIVDKPSTSNRLG 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L G+ + I +A+ Sbjct: 79 VIGRQLFGATSDRLQENSLFDIVDTIRQAKDDRNITGIVLDLKDFAGADQPSMQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KPVI + + Y ++ +N I + V G Y K LDKL Sbjct: 139 REFRDSGKPVIA-IGDSYTQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF +++P A + + + ++ ++ +R I ++ Sbjct: 198 VTTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLGTIAANRQITAEQVFPG 257 Query: 208 SDG-----RIWTGAEAK---KVGLIDVVGGQEEVWQSLYA 239 + G R+ G AK L+D +G E+ ++L Sbjct: 258 ARGVLDGLRMVDGDTAKYALDNKLVDQLGSSAEIEKALTK 297 >gi|269102166|ref|ZP_06154863.1| protease IV [Photobacterium damselae subsp. damselae CIP 102761] gi|268162064|gb|EEZ40560.1| protease IV [Photobacterium damselae subsp. damselae CIP 102761] Length = 617 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 17/277 (6%) Query: 22 VVYFSWSSHVED----NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + Y+ + + + D + +A + G I D E + D++ A Sbjct: 307 ISYYDYLASLTDINVPSKNKIAVVIASGAIIDGPQRPGTTGGDTTAELLREARFDNNVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + + K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 367 VILRVDSPGGSAFASELIRNEVDALQKAGKPVVVSMSSVAASGGYWISSSADKIIANPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+KLG+ V ++P + ++ Q VD Y Sbjct: 427 ITGSIGIFAVMTTFEKGLNKLGIYNDGVGTTPFAGVG-VTRALPQGVGEIFQLGVDHGYQ 485 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQS 245 F+ LVS+ R++ + ++ GR+WTGA+AK++GL+D +G + + L D Sbjct: 486 RFIGLVSKYRHMSLAQVDKIAQGRVWTGADAKRLGLVDELGDFDTAISAAVDLAKINDYQ 545 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 I ++ P + + + LL + M + Sbjct: 546 IEWMQQPLSPMEMFLQQFTTEARTQLLTMVLGDMPKA 582 Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 117/329 (35%), Gaps = 46/329 (13%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN-SPHVARIAIRGQIEDSQE------- 52 + F + + ++ + L ++ E P + + G I + ++ Sbjct: 19 LSFTRQLVLNLIFLILVGALFFAFYQGDKDTETQPQPGALVLDLSGPIVEQKDPVNPVDS 78 Query: 53 ------------------LIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKV 93 ++E I S D+ L+++L + P S I +AI Sbjct: 79 LLSEAMGKEPQQENVLFDIVEAIRAASGDNDIKGLVLNLQNMPETSLTKLRYIAKAITDF 138 Query: 94 KNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K KPV + S Y ++ ++ + + + G Y K L+KL V+ Sbjct: 139 KQSGKPVYAYGDNFSQS-QYYLASYADKVFMSPDGAILLTGYGSYTLYYKSLLEKLDVTT 197 Query: 153 KSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-----L 205 + K+ P+ ++ A + ++ + + V+++RNI + Sbjct: 198 HVFRVGTYKSAIEPYIRDNMSDAAKEANTVWLNQLWQAYTSDVAKNRNIDAAELTPKLPE 257 Query: 206 VLS-----DGRIWTGAEAKKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWNPPKN 257 ++ DG + K+GL+D + E+ Q + D + +I ++ + Sbjct: 258 FIAALKSVDGDF--AKLSVKLGLVDSLMTHPEMTQEFEKTFGTDQDHNFNQISYYDYLAS 315 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 ++ + + +++ + ++ + G Sbjct: 316 LTDINVPSKNKIAVVIASGAIIDGPQRPG 344 >gi|157964584|ref|YP_001499408.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] gi|157844360|gb|ABV84861.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] Length = 305 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 155/297 (52%), Gaps = 15/297 (5%) Query: 6 KKIKTRYV---MLSLVTLTVVYFSWSSH--------VEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R + + +++ + +V+ + N ++A + I I + ++ Sbjct: 13 RQIKSRLLIWKLAAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRD 72 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + MAAS GYLI Sbjct: 73 KKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNILRKISAKKPVVIVMGTMAASGGYLI 132 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + I++ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 133 SLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 192 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + + ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 193 RVTIMENIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTAL 252 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + +KD+ D+ I + +P + G+ A++ Sbjct: 253 KWLQEVQKINVNLLVKDYQLKPKPKLMDI----ILEDFDSIVPSFFKNSFNGIKAIF 305 >gi|110638854|ref|YP_679063.1| protease IV; signal peptide peptidase [Cytophaga hutchinsonii ATCC 33406] gi|110281535|gb|ABG59721.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Cytophaga hutchinsonii ATCC 33406] Length = 583 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 10/261 (3%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDS 65 + V+ + + PH+A + G+I+ S+ + R+ D + Sbjct: 280 IDFVSYKKIIKGKPEKTTSSEPHIAVLFANGEIQSGKGDNETIGSETFCTDLRRLREDKN 339 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++SPGGSA A + I+R I + KPVI + +AAS GY I+ A + IVA+ Sbjct: 340 VKAIVLRVNSPGGSALASDLIWREIMLAREVKPVIASMGNVAASGGYYIAMACDTIVASP 399 Query: 126 TSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV + L +KLG+S K+ S V ++Q+ V++ Sbjct: 400 ATITGSIGVFGLLMNTEDLLNNKLGISTDREKTGLYSDLGSLTRPVTDAERMIIQNEVNA 459 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 Y F+R +E R+ + V + GR+W G +AK+ LIDV GG + Sbjct: 460 IYATFIRKAAEGRHTSVETIEVHASGRVWAGKDAKENNLIDVFGGMNDAVMLAAKAANMG 519 Query: 245 SIRKIKDWNPPKNYWFCDLKN 265 + + KN L N Sbjct: 520 EKYALVYYPEQKNQALIALMN 540 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 13/196 (6%) Query: 52 ELIERIERISRDDSATALIVSL---SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 EL E I+ + +D +++ + ++ + + + K I EM Sbjct: 80 ELREAIQEAAVNDKIKGIVIEIKFANTG---IATWKELRDELTAFKKSGKFIIAYGEMYT 136 Query: 109 SAGYLISCASNIIVAAETSLV--GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AGY ++ ++ I E+ ++ IGV Y K L K+GV + + K+ P Sbjct: 137 EAGYYLASVADEIYLPESGMLEFNGIGVNMLY--FKNLLSKIGVKTEVFRVGKYKSAIEP 194 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGL 223 ++ + + + ++S Y + ++ SRNIP +SD + +AKK GL Sbjct: 195 LVNDHMSDEDREQVHLYINSLYSVMLNDIASSRNIPLASLKNISDSMLVRNAHDAKKYGL 254 Query: 224 IDVVGGQEEVWQSLYA 239 + V +E+ SL Sbjct: 255 VTNVAYYDEMLSSLKK 270 >gi|56752187|ref|YP_172888.1| protease IV [Synechococcus elongatus PCC 6301] gi|81300725|ref|YP_400933.1| signal peptide peptidase A [Synechococcus elongatus PCC 7942] gi|56687146|dbj|BAD80368.1| protease IV [Synechococcus elongatus PCC 6301] gi|81169606|gb|ABB57946.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Synechococcus elongatus PCC 7942] Length = 270 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 135/264 (51%), Gaps = 8/264 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI + G I Q L+ ++ ++ AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEVSGAIAGGTRQRLLRSLKTVAE-RGYPALLLRIDSPGGTVGDSQEIYEALKR 68 Query: 93 VKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++++ VI ++AS G I ++ IV+ ++ GSIGV+ + ++ LD++GV Sbjct: 69 LRSQHQTKVIASFGNISASGGVYIGMGADKIVSNPGTITGSIGVILRGNNLERLLDRVGV 128 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 S K +KS P K S E+ +++Q+++D SY FV+ V+++R + + +DG Sbjct: 129 SFKVIKSGPYKDILSFDRELTDNEKEILQNLIDISYQQFVQTVADARQLTVETVKSFADG 188 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 RI+TG +A +GLID +G +E+ + L G+D + PK L + Sbjct: 189 RIFTGEQALSLGLIDRLGTEEDARRWAAELVGLDPEKATLAPIEEPKPLTRRLLPLGQVG 248 Query: 270 SLLEDTIPLMKQTKVQGLWAVWNP 293 + L+ + Q LW ++ P Sbjct: 249 AGLDW-LEFELTAAGQPLW-LYRP 270 >gi|75907910|ref|YP_322206.1| signal peptide peptidase A [Anabaena variabilis ATCC 29413] gi|75701635|gb|ABA21311.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Anabaena variabilis ATCC 29413] Length = 273 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 9/266 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I + ++E ++ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGAIASGTRKRVLEALKTVEE-KKFPALLLRIDSPGGTVGDSQEIYSALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LREKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ ++Q+++D+SY FV+ V+E R++ +K +DGRI Sbjct: 129 KVIKSGPYKDILSFDRELTEPEQDILQELIDTSYQQFVQTVAEGRSLAVEKVKSFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNL----S 267 +TG +A ++G++D +G +EE + L G+D K L S Sbjct: 189 FTGQQALELGVVDRLGTEEEARRWTAELVGLDPEKTPCYTLEERKPLLSRVLPGSRKGYS 248 Query: 268 ISSLLEDTIPLMKQTKVQGLWAVWNP 293 D + T LW ++ P Sbjct: 249 RLGASIDWLEFEMSTSGLPLW-LYRP 273 >gi|21233189|ref|NP_639106.1| protease IV [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770130|ref|YP_244892.1| protease IV [Xanthomonas campestris pv. campestris str. 8004] gi|188993338|ref|YP_001905348.1| protease IV [Xanthomonas campestris pv. campestris str. B100] gi|21115040|gb|AAM43018.1| protease IV [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575462|gb|AAY50872.1| protease IV [Xanthomonas campestris pv. campestris str. 8004] gi|167735098|emb|CAP53310.1| protease IV [Xanthomonas campestris pv. campestris] Length = 633 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 11/271 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I ++ + + D+ A+++ + SPGG +A Sbjct: 331 DSRPQVAVVVAAGEISGGEQPAGRIGGESTAALLRQARDDEEIKAVVLRVDSPGGEVFAS 390 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P + Sbjct: 391 EQIRREVVALKQAGKPVVVSMGDLAASGGYWISMNADRIYADPSTISGSIGIFGMVPNLT 450 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P A Q++Q V++ Y F V+++R+ + Sbjct: 451 RALDKIGVHTDGVGTTRFAGAFDITRPLDPAAGQVIQAVINKGYADFTGKVAQARHQSVE 510 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+GA+AK GL+D GG +E + + + F Sbjct: 511 AIDKVARGRVWSGAQAKDHGLVDAFGGMQEAVADAASRAKLSKGKFRVRYVEKAATPFSQ 570 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + S L + L + L A P Sbjct: 571 FMSGFAGSRLGAWM-LSDSGMARALLARSLP 600 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 84/212 (39%), Gaps = 22/212 (10%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++L+ IE +D ++++L P G A + +A+Q ++ I E + Sbjct: 99 RDLVRVIEAAGKDSKIERVLLNLDKLQPSGFASQ-REVAKALQGLRASGKQIVAFSESMS 157 Query: 109 SAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ +N + GS+ G QY + DKLGV + + K+ Sbjct: 158 QGQYLLAAQANEVYLDPM---GSVLLEGLGRYRQYF-REGLQDKLGVDVHLFRVGEYKSA 213 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTGAE 217 P+ + A + ++ + ++ V+ +R + + L +G G + Sbjct: 214 AEPYILDAASADAKEADLFWMNDVWQRYLADVATARKLSPAQLAAGIDTLPEGVTAAGGD 273 Query: 218 ----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + +E+V L GV + Sbjct: 274 LAKFALQQKLVDGLKTREQVDSLLTERGVADN 305 >gi|167837368|ref|ZP_02464251.1| peptidase, U7 family protein [Burkholderia thailandensis MSMB43] Length = 333 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L ++ L + S S + H A + I G+I +++++ ++ Sbjct: 48 RIFFRFAFLVVLGALAFAFLSVSGDGSKLASGRHTAVVTIEGEIAASTNANAEDINTALD 107 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 108 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPGKPLYVVVSDMCASGGYYIA 167 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 168 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 227 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 228 AHAQAMLDQIHEQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 287 Query: 236 SLYA 239 + Sbjct: 288 DVLK 291 >gi|78065699|ref|YP_368468.1| peptidase S49 [Burkholderia sp. 383] gi|77966444|gb|ABB07824.1| Peptidase S49 [Burkholderia sp. 383] Length = 330 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L+ L ++ FS S + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLAVFVLFAFALIDFSSDSKFSSSGRHTALVTIDGEIAAGVNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRAKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|226314459|ref|YP_002774355.1| signal peptide peptidase [Brevibacillus brevis NBRC 100599] gi|226097409|dbj|BAH45851.1| putative signal peptide peptidase [Brevibacillus brevis NBRC 100599] Length = 321 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 25/281 (8%) Query: 25 FSWSSHVEDN--SPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVS 72 F+W +V + + ++ + G I Q L E++ RI D+ AL++ Sbjct: 38 FAWEENVVSGYGNSKIVQLFVNGTISGQQNSAGVPSMTELLTEQLRRIEEDELVKALVLR 97 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + SPGG A + + R + ++K + P++ + AAS GY ++ + I A +L G Sbjct: 98 IDSPGGEVVATDELHRRLLRLKQVRNLPIVVSMGSTAASGGYYLATTGDAIFANPNTLTG 157 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 S+GV+F +KLGV ++KS K SP + + Q +V+ SY+ FV Sbjct: 158 SLGVIFNLFNYSEAANKLGVHQYAIKSGRFKDIGSPSRPLTDPERHIFQTLVNESYNNFV 217 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 ++ + RN+ + L ++DGR+++G +AK++GLID G EE + +L ++ I+ Sbjct: 218 DVIVKGRNLSRQRVLEIADGRVYSGEQAKRMGLIDEFGDLEEATRYALSLSGEKEAMVIR 277 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 LSIS LL GL +W Sbjct: 278 Y-----------ADQLSISKLLFSMKQYWSNPDPLGLNRIW 307 >gi|237813214|ref|YP_002897665.1| peptidase, U7 family protein [Burkholderia pseudomallei MSHR346] gi|237504696|gb|ACQ97014.1| peptidase, U7 family protein [Burkholderia pseudomallei MSHR346] Length = 305 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 20 RIFFRFAFLAVLGALAFAFLSVSGDGSKLASGRHTAVVTIDGEIAASTNANAEDINTALD 79 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 80 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 139 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 140 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 199 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 200 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 259 Query: 236 SLYA 239 + Sbjct: 260 DVLK 263 >gi|227326088|ref|ZP_03830112.1| protease 4 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 616 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 13/283 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATAL 69 +++ ++ V++N +A + G I D +I D AL Sbjct: 308 FISIYDYAIKPPVQNN-NQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKAL 366 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++ ++SPGGS A E I + ++ KP++ + MAAS GY IS +N I+++ ++L Sbjct: 367 VLRVNSPGGSVTASELIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANTIISSASTL 426 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ + L+ LGV V +SP+ S + P+ QMMQ ++ Y Sbjct: 427 TGSIGIFGVITTFEDSLESLGVHTDGVATSPLAD-LSITKSLPPEFSQMMQLSIERGYKN 485 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR- 247 F+ +V+++R ++ ++ G +W G++AK+ GL+D +G ++ + L + Sbjct: 486 FIDIVAQARKKTPEQIDQIAQGHVWVGSDAKENGLVDQIGDFDDAVKKAAELAKLGQYQL 545 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 P + N S+ +LL + M V L V Sbjct: 546 NWYAEQPGLLDTMLNQVNASVYALLPVAVQSMLPAPVAQLAEV 588 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 102/283 (36%), Gaps = 50/283 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ +Y + E + + + G + D Sbjct: 19 LNFIREFILNIFLIALILVGVGIYSQVKTTPEAATKGALLVDLTGVVVDQPTVNNKLRQL 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + DD+ T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGASNNRRQENSLFDIVDSIRQAKSDDNITGMVLDLSDFTGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 ++ KP+ S Y ++ +N + GS+ G Y K LDKL Sbjct: 139 FRDSGKPIYAVGDSYNQS-QYYLASFANTVSLTPQ---GSVDLHGFATNNLYFKSMLDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 V+ + K+ P+ +++P A +++ + ++ VS +R I + Sbjct: 195 KVTTNIFRVGTYKSAVEPYLRDDMSPAARDADGRWINALWQQYLNTVSANRQITPQQLFP 254 Query: 207 LS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G T A L+D V + QSL Sbjct: 255 GATSIIAGLQAVQGD--TARYALDNKLVDEVASRSVTEQSLVK 295 >gi|72382638|ref|YP_291993.1| signal peptide peptidase A [Prochlorococcus marinus str. NATL2A] gi|72002488|gb|AAZ58290.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Prochlorococcus marinus str. NATL2A] Length = 269 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 5/264 (1%) Query: 33 DNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I G I +++ +++I AL++ + SPGG+ + I A+ Sbjct: 8 KSKKRMARICIEGPINSETRKIVLKALKQIEE-REFPALLLRIDSPGGTVGDSQEIHSAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + V+ ++AS G I + IVA ++ GSIGV+ + + L+K+G Sbjct: 67 LRLREKGCHVVASFGNISASGGVYIGVGAEKIVANPGTITGSIGVILRGNNLSKLLEKVG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + ++Q ++DSSY FV VS+ RN+ + +D Sbjct: 127 IKFETVKSGIYKDILSPDRPLSTEERALLQSLIDSSYEQFVLAVSKGRNLTPEVVKSFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR++TG +AK+ GL+D +G + + + K + K L I Sbjct: 187 GRVFTGEQAKEFGLVDEIGDENDAKLLAIKIANLDEKTKPITFGKTKKKLLGFLPGGKII 246 Query: 270 SLLEDTIPLMKQTKVQGLWAVWNP 293 L + + L + Q LW ++ P Sbjct: 247 HNLVNALNLELEGNGQILW-LFKP 269 >gi|256545925|ref|ZP_05473280.1| U7 family peptidase [Anaerococcus vaginalis ATCC 51170] gi|256398347|gb|EEU11969.1| U7 family peptidase [Anaerococcus vaginalis ATCC 51170] Length = 333 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 122/213 (57%), Gaps = 5/213 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 D +A I+ G I D + +E++E I++DDS +I+ ++SPGG+ Y E I Sbjct: 63 GDKKNKIALISYEGAIGDGEVYDSFMEQLEDINKDDSVKGVIMQVNSPGGAVYNSEQIAN 122 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I++++ K PV T + MAAS GY IS ++ I A+ +L GSIGV+ + + Sbjct: 123 KIKEIQTDKKIPVFTVMKTMAASGGYYISAPTDKIYASNETLTGSIGVIMSSRSFQGLFE 182 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K G+ +++ + MK S ++ + + QD+++SS+ F+++VS+ R++ D+ Sbjct: 183 KYGIKEQNITTGKMKDAGSLGKDMTDEQKKYFQDLINSSFDRFIKVVSQGRSMKEDEVRK 242 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+DGR++ GA+AK GL+D +G ++ + + Sbjct: 243 LADGRVYDGAQAKNNGLVDKIGNLDDAIEDMKK 275 >gi|17231505|ref|NP_488053.1| protease IV [Nostoc sp. PCC 7120] gi|17133148|dbj|BAB75712.1| protease IV [Nostoc sp. PCC 7120] Length = 273 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 9/266 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I + ++E ++ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGAIASGTRKRVLEALKTVEE-RKFPALLLRIDSPGGTVGDSQEIYSALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LREKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLDKIGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ ++Q+++D+SY FV+ V+E R++ DK +DGRI Sbjct: 129 KVIKSGPYKDILSFDRELTEPEQDILQELIDTSYQQFVQTVAEGRSLAVDKVKSFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNL----S 267 +TG +A ++G++D +G +EE + L G+D K L S Sbjct: 189 FTGQQALELGVVDRLGTEEEARRWTAELVGLDPEKTPCYTLEERKPLLSRVLPGSRKGYS 248 Query: 268 ISSLLEDTIPLMKQTKVQGLWAVWNP 293 D + T LW ++ P Sbjct: 249 RLGASIDWLEFEMSTSGLPLW-LYRP 273 >gi|257454429|ref|ZP_05619691.1| signal peptide peptidase SppA, 36K type [Enhydrobacter aerosaccus SK60] gi|257448195|gb|EEV23176.1| signal peptide peptidase SppA, 36K type [Enhydrobacter aerosaccus SK60] Length = 360 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 26/266 (9%) Query: 8 IKTRYVMLSLVTLTVVYF---------SWSSHVEDNSPHVARIAIRGQI-----EDSQEL 53 I + + L V L S S ++ + PH+A + ++G I +SQ + Sbjct: 60 IFFKLITLGYVLLFGAVVAKGCSGSAKSGMSDIDMSKPHLAVVDVKGVISSDNEANSQAV 119 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 E + +D A A+ + ++SPGGS + I++ + +++ P + + +M AS Sbjct: 120 GEALTEAFDNDQAQAVALRINSPGGSPVQSDEIWQTMTELRKAHPNKKLYAVIEDMGASG 179 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I +SLVGSIGV+ V+ +DKLGV ++ + K S + Sbjct: 180 AYYIASAADEIWVNPSSLVGSIGVIMPSYNVQGLMDKLGVKDGTMTAGAHKDILSMSRPL 239 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + Q +Q V+D+++ F+ V + R + L G W+G +A +GL D G Sbjct: 240 SEFERQHVQGVLDNTHAHFINAVKQGRGNRLKNPDANQLFSGLFWSGEQAINLGLADKKG 299 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNP 254 G + L + + ++NP Sbjct: 300 GISTLESQL-------KLDNVVEYNP 318 >gi|256822612|ref|YP_003146575.1| signal peptide peptidase SppA, 67K type [Kangiella koreensis DSM 16069] gi|256796151|gb|ACV26807.1| signal peptide peptidase SppA, 67K type [Kangiella koreensis DSM 16069] Length = 619 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 10/260 (3%) Query: 30 HVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSA 80 + N VA I +G+I D I++ DD A+++ + SPGGSA Sbjct: 316 ELPSNKDTVAVIVAKGEIVDGSRKEGVIGGDSTARLIQKARLDDKVKAIVLRVDSPGGSA 375 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 +A E I +++ +N K V+ + +AAS GY IS S+ I A T++ GSIG+ P Sbjct: 376 FASEVIRSELERAQNEGKIVVASMGGVAASGGYWISATSDEIWAHPTTITGSIGIFGMIP 435 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L+KLGV V ++ P ++P+ Q++Q ++ Y F+ LV E RN+ Sbjct: 436 TFEEPLNKLGVYRDGVGTTKWTLAFDPMDGISPEIAQLIQRSIERGYERFLSLVGEGRNM 495 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ ++ GR+W+G +A ++GL+D +G E+ +S L +K + Sbjct: 496 TIEEVDQIAQGRVWSGEDAHRLGLVDQLGDLEDAIESAAKLANIGDDYAVKFIKRELSAE 555 Query: 260 FCDLKNLSISSLLEDTIPLM 279 ++NL + E + + Sbjct: 556 EIFIRNLLDQAKAEGKLDAV 575 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 87/223 (39%), Gaps = 17/223 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPVITEVHEMAA 108 +L++ IE DD + ++++++S G + + RAI K + V + Sbjct: 88 DLLDAIEYAKNDDRISVMVINVNSLQGVYAGISKYQDLRRAIDDFKESGKKVIAVGDYYM 147 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y ++ +++ + ++ G+ Y K LD LGV + + K+ PF Sbjct: 148 QGQYYLASSADEVYMNPFGMLMFEGLGRNGTYFKSALDNLGVKVHVFRVGTFKSAVEPFI 207 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL----------SDGRIWTGA 216 +++ A + + + + + ++ SRN+ ++ ++G +G Sbjct: 208 RDDMSEAAKEANLEWLGDLWTHMKQDLAASRNMSVEEFDSFIENYLVKFEAANGD--SGE 265 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 A + G +D + + E Q + + + KNY Sbjct: 266 LAVQEGFVDKLMTRGEFRQYMIDMVGLNEKKDSYKAISHKNYL 308 >gi|54309756|ref|YP_130776.1| putative protease IV [Photobacterium profundum SS9] gi|46914194|emb|CAG20974.1| putative protease IV [Photobacterium profundum SS9] Length = 617 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 11/224 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + +A + G I D + DD A+I+ + SPGGSA+A E Sbjct: 322 SDNQIAVVVASGAIIDGTQRQGTVGGDSTAALLRDARLDDDIKAVILRVDSPGGSAFASE 381 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + +K KPV+ + +AAS GY IS +++ I+A T++ GSIG+ + Sbjct: 382 VIRNEVDALKQAGKPVVVSMSSVAASGGYWISASADRIIAQPTTITGSIGIFAILTTFEK 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+K+GV V ++P E+ Q+ Q V+ Y F+ LVS+ RN+ ++ Sbjct: 442 GLEKMGVYSDGVGTTPFSGVG-VTRELPEGVGQVFQLGVEHGYKRFISLVSQYRNMSLEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ GR+WTG +A ++GL+D +G ++ + L +S Sbjct: 501 ADKIAQGRVWTGQDAMELGLVDQLGDFDDAIAAAVELAKLESYE 544 Score = 92.5 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 120/337 (35%), Gaps = 63/337 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ-------- 51 + F + I + L +V V F++ + A + + G I + + Sbjct: 19 ISFTRQLILNLF-FLIIVGAIFVAFNYGEDTPEQPDKAALVLDLSGPIVEQRRYINPIDS 77 Query: 52 -----------------ELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAI 90 ++ E I + S D+ L+++L G + I +AI Sbjct: 78 IASNVLGHPPAQDNVLFDITETIRKASADNKIEGLVLNL---KGMSETSLTKLRYIAKAI 134 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPF 144 + K KPV S Y ++ ++ + + GV+ Y K Sbjct: 135 TEFKAAGKPVYAYGDNFGQS-QYYLASYADKVFMSPDG-----GVMLTGYGSYSLYYKSL 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+KL V+ + K+ P++ +++ A + ++ + F V+ +R+I Sbjct: 189 LEKLNVNTHVFRVGTYKSFVEPYTRDDMSAPAREANTVWLNQLWGAFTTDVANNRHIDAA 248 Query: 203 ----------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL---YALGVDQSIRKI 249 + L DG + K+GL+D + + ++ + + + S +I Sbjct: 249 TLTPNIDDFVQALKAVDGDF--AKLSLKMGLVDELISRPQLRNKMIKEFGSDGEHSFNQI 306 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + DL + + +++ + ++ T+ QG Sbjct: 307 SYYEYQPTIINTDLPSDNQIAVVVASGAIIDGTQRQG 343 >gi|113461051|ref|YP_719118.1| protease IV family protein [Haemophilus somnus 129PT] gi|112823094|gb|ABI25183.1| protease IV family [Haemophilus somnus 129PT] Length = 621 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 140/274 (51%), Gaps = 18/274 (6%) Query: 31 VEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAY 81 + P +A + + G I D + + + + + + + A+++ ++SPGGSA+ Sbjct: 319 AQPTQPAIAVVNVEGAIVDGESDEQNVGGDSIAQLLREANDEPNIKAVVLRVNSPGGSAF 378 Query: 82 AGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + + K+ KPV+ + +AAS GY IS ++ IVA ++ GSIG+ +P Sbjct: 379 ASEIIRQEVDNLQKSGKPVVVSMGAIAASGGYWISSTADYIVADPNTITGSIGIFAMFPT 438 Query: 141 VKPFLDKLGVSIKSVKSSP--MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + K+GV+ V ++ MK+ SP S+++ + ++Q ++ Y F+ +VS RN Sbjct: 439 FEKSMQKIGVNADGVATTDVVMKSHFSPLSKISSE---IIQLEIEHGYDQFLDVVSRGRN 495 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++ G++W+G +A L+D +G ++ + L + +S +IKD++ Sbjct: 496 LSKTQVDKIAQGQVWSGFDAYTYKLVDQLGSFDDAVEKARELVIQKSSEEIKDFSVV--- 552 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 W + + + L+++ + Q + ++ Sbjct: 553 WLTEKEPSLLGELMKNAKQHSEHNLRQYIAHLFG 586 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 111/271 (40%), Gaps = 47/271 (17%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHV-----ARIAIRGQIEDSQ--------- 51 +++ V L V L V FS +S + + + + G + D++ Sbjct: 19 RRVVMNIVFLFFVLLIVAVFSVNSSMSNKVDLTHFKGALLLNLDGYLADNRSDDTAWQEL 78 Query: 52 ----------------ELIERIERISRDDSATALIVSLSSPGG-SAYAGEAIFRAIQKVK 94 +++ I+ +D TAL++ L+ G A I +AIQ K Sbjct: 79 LLELGNQHVPRKISTFDVVNAIQAAKKDPKITALVLDLNYFDGKDIPALTYIGKAIQAFK 138 Query: 95 N-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPVI S YL++ +++I+ V G++ + Y K +KL ++ Sbjct: 139 ASKKPVIAYADNYTQS-QYLLASYADVILLNPQGEVAIEGMVAENLYFKSLFNKLEITPH 197 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + K+ PF +++ K+ + ++ + + ++V+E+R+IP + L D + Sbjct: 198 IFRVGTYKSAVEPFMLDKMSEKSRENTSRWLNQLWKSYQQIVAENRDIPLAQVLP--DSK 255 Query: 212 IWT-------GAE---AKKVGLIDVVGGQEE 232 + G + AKK GLI + +E Sbjct: 256 TYLSELKALNGNQTEYAKKRGLITELAVTQE 286 >gi|322616683|gb|EFY13592.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619801|gb|EFY16675.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622369|gb|EFY19214.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627893|gb|EFY24683.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633009|gb|EFY29752.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636745|gb|EFY33448.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641229|gb|EFY37870.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645218|gb|EFY41747.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650160|gb|EFY46574.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655734|gb|EFY52036.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660059|gb|EFY56298.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665374|gb|EFY61562.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669639|gb|EFY65786.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673558|gb|EFY69660.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677484|gb|EFY73548.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679851|gb|EFY75890.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687323|gb|EFY83295.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192441|gb|EFZ77671.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199518|gb|EFZ84611.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204132|gb|EFZ89146.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208750|gb|EFZ93688.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210920|gb|EFZ95784.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217726|gb|EGA02441.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220281|gb|EGA04736.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223877|gb|EGA08177.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229529|gb|EGA13652.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232752|gb|EGA16848.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240209|gb|EGA24253.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242803|gb|EGA26824.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249119|gb|EGA33038.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254380|gb|EGA38197.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257169|gb|EGA40872.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263510|gb|EGA47038.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267077|gb|EGA50562.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272181|gb|EGA55595.1| protease 4 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 618 Score = 248 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KP+ + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPIFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADNRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|261821537|ref|YP_003259643.1| protease 4 [Pectobacterium wasabiae WPP163] gi|261605550|gb|ACX88036.1| signal peptide peptidase SppA, 67K type [Pectobacterium wasabiae WPP163] Length = 616 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 12/265 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFED 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPLAD-LSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYWFCD 262 ++ G +W G++AK+ GL+D +G ++ + L + P + Sbjct: 501 IDQIAQGHVWVGSDAKENGLVDQIGDFDDAVKKAAELAKLGQYQLNWYAEQPNLLDTMLN 560 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGL 287 N S+ +LL + M V L Sbjct: 561 QVNASVYALLPVAVQSMLPAPVAQL 585 Score = 85.6 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 112/303 (36%), Gaps = 59/303 (19%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ +Y + E+ + + + G + D Sbjct: 19 LNFIREFILNIFLIALILVGVGIYSQVKTTPEEATKGALLVDLTGVVVDQPSVNNKLRQL 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + DD+ T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGASNNRRQENSLFDIVDSIRQAKSDDNITGIVLDLSDFTGADQPSMQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 ++ KP+ S Y ++ +N + GS+ G Y K LDKL Sbjct: 139 FRDSGKPIYAVGDSYNQS-QYYLASFANTVSLTPQ---GSVDLHGFATNNLYFKSMLDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 V+ + K+ P+ +++P A +++ + ++ VS +R I + Sbjct: 195 KVTTNIFRVGTYKSAVEPYLRDDMSPAARDADGRWINALWQQYLNTVSANRQITPQQLFP 254 Query: 207 LS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + G T A L+D V + +QS+ K+ WN K Sbjct: 255 GATNILAGLQAVQGD--TARYALDNKLVDEVASRS---------VTEQSLVKVFGWNNQK 303 Query: 257 NYW 259 N++ Sbjct: 304 NHF 306 >gi|161614303|ref|YP_001588268.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363667|gb|ABX67435.1| hypothetical protein SPAB_02048 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 618 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|296102810|ref|YP_003612956.1| protease 4 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057269|gb|ADF62007.1| protease 4 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 618 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHVED-NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + + +++ D + VA + G I D QE +I D A++ Sbjct: 310 AISMYDYAAKKPDESGDSVAVVFANGAIMDGQETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVSASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD LGV V +SP+ S + P+ +MMQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDYLGVHTDGVATSPLADV-SVTKSLPPEVSEMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV++SR + ++ G +WTG +AK GL+D +G ++ + L + + Sbjct: 489 ITLVADSRKKTPQQIDEIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELAKLKQ-WHV 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + +++ + ++S+S ++L + + V Sbjct: 548 EYYQDEPSFFDMVMDSMSVSVRAMLPEALQAYLPAPV 584 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 106/281 (37%), Gaps = 44/281 (15%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS-------- 50 + FV + +++L LV + +++ +S A + I G I D Sbjct: 19 LNFVRNLVMNLVFILLVLVCAGIWMHISNANQSQHSTRGALLLDITGVIVDKPSTSNRLG 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L G+ + I +A+ Sbjct: 79 VIGRQLFGATSDRLQENSLFDIVDTIRQAKDDRNITGIVLDLKDFAGADQPSMQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KPVI + + + Y ++ +N I + V G Y K LDKL Sbjct: 139 REFRDSGKPVIA-IGDSYSQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF +++P A + + + ++ V+ +R I + Sbjct: 198 VTTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLTTVASNRQITPAQVFPG 257 Query: 208 SDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + G + G A L+D +G E+ +SL Sbjct: 258 AQG-VLDGLRKVDGDTAKYALDNKLVDALGTSAEIEKSLSK 297 >gi|67641118|ref|ZP_00439903.1| peptidase, U7 family protein [Burkholderia mallei GB8 horse 4] gi|226199956|ref|ZP_03795506.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei Pakistan 9] gi|242315612|ref|ZP_04814628.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 1106b] gi|225928012|gb|EEH24049.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei Pakistan 9] gi|238521982|gb|EEP85429.1| peptidase, U7 family protein [Burkholderia mallei GB8 horse 4] gi|242138851|gb|EES25253.1| putative signal peptide peptidase SppA, 36K type [Burkholderia pseudomallei 1106b] Length = 305 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLSLV-TLTVVYFSWSSHVED--NSPHVARIAIRGQI-----EDSQELIERIE 58 +I R+ L+++ L + S S + H A + I G+I +++++ ++ Sbjct: 20 RIFFRFAFLAVLGALAFAFLSVSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINTALD 79 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 D +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 80 SAFEDSGTVGVVLKINSPGGSPVQAGIVYDEIRRLRKKYPAKPLYVVVSDMCASGGYYIA 139 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 140 AAADKIYVDKASIVGSIGVLMDGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMD 199 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q+++D + F++ V + R ++ + G WTGA++ ++GL D G + V + Sbjct: 200 AHAQEMLDEIHAQFIKAVKDGRGARLHESPDIFSGLFWTGAKSIELGLADDYGTTDTVAR 259 Query: 236 SLYA 239 + Sbjct: 260 DVLK 263 >gi|224584189|ref|YP_002637987.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468716|gb|ACN46546.1| protease IV [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322714354|gb|EFZ05925.1| protease IV [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 618 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 97/272 (35%), Gaps = 41/272 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + + + + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQIGNGSNSEQTARGALLLDISGVIVDKPSTNHRLGALGRQLFG 86 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFRAIQKVKNR-K 97 +++ I + D + T +++ L + G+ I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + V G Y K LDKL VS + Sbjct: 147 PVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGR 211 K+ PF +++P A + + + ++ VS +R I + + DG Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLFPGAQAIIDGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 G + A L+D + +V ++L Sbjct: 266 TSVGGDTAKYAFDHKLVDALASSADVEKALTK 297 >gi|16760600|ref|NP_456217.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141640|ref|NP_804982.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413719|ref|YP_150794.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168463310|ref|ZP_02697241.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821937|ref|ZP_02833937.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443380|ref|YP_002040552.1| protease 4 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197250444|ref|YP_002146744.1| protease 4 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362642|ref|YP_002142279.1| protease 4 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|207857196|ref|YP_002243847.1| protease 4 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213028304|ref|ZP_03342751.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213162980|ref|ZP_03348690.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213647253|ref|ZP_03377306.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850391|ref|ZP_03381289.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238910887|ref|ZP_04654724.1| protease 4 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829513|ref|ZP_06547115.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81514303|sp|Q8Z6F3|SPPA_SALTI RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase gi|25290100|pir||AB0711 protease IV (EC 3.4.21.-) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502896|emb|CAD02059.1| protease IV [Salmonella enterica subsp. enterica serovar Typhi] gi|29137268|gb|AAO68831.1| protease IV [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127976|gb|AAV77482.1| protease IV [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194402043|gb|ACF62265.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195634238|gb|EDX52590.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094119|emb|CAR59619.1| protease IV [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214147|gb|ACH51544.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205341603|gb|EDZ28367.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708999|emb|CAR33329.1| protease IV [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320086223|emb|CBY95997.1| protease IV [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 618 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|94311372|ref|YP_584582.1| peptidase S49 [Cupriavidus metallidurans CH34] gi|93355224|gb|ABF09313.1| Peptidase S49, periplasmic serine protease (ClpP class) [Cupriavidus metallidurans CH34] Length = 387 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 13/287 (4%) Query: 7 KIKTRYVMLSLVTLT---VVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R++ L++V L V+ F + H A + + G+I + + ++ Sbjct: 101 KIFFRFLTLAIVALILYAVIDFKGDVLSSTSGRHTAMVTLDGEIAAGTTASADSINAALQ 160 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 D SA +I+ ++SPGGS I I +++ KP V E+ AS GY ++ Sbjct: 161 AAFEDTSAAGVILKINSPGGSPVQAGIINDEIHRLRKLYPDKPFYVVVEEICASGGYYVA 220 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DK+GV + S K PFS P+ Sbjct: 221 AAADKIYVDKASIVGSIGVLMDGFGFTGLMDKVGVQRRLYTSGANKGMLDPFSPEVPRQK 280 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++ + F+ +V E R L G W+G A ++GL D +G + V + Sbjct: 281 GYAESMLKEIHQQFIDVVKEGRGDRLKNDPELFSGLFWSGERAVELGLADGLGSADYVAR 340 Query: 236 SLYALG--VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 L+ VD ++++ K + ++ T+P ++ Sbjct: 341 DLFKAEDIVDYTVKENIAERMAKRFGAAAGSAAMKLMMMSATVPSVR 387 >gi|168233210|ref|ZP_02658268.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469685|ref|ZP_03075669.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|200389848|ref|ZP_03216459.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194456049|gb|EDX44888.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|199602293|gb|EDZ00839.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205332636|gb|EDZ19400.1| signal peptide peptidase SppA, 67K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 618 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 97/272 (35%), Gaps = 41/272 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + + + + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQIGNGSNSEQTARGALLLDISGVIVDKPSTNHRLGALGRQLFG 86 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFRAIQKVKNR-K 97 +++ I + D + T +++ L + G+ I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + V G Y K LDKL VS + Sbjct: 147 PVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGR 211 K+ PF +++P A + + + ++ VS +R I + + DG Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLFPGAQAIIDGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 G + A L+D + +V ++L Sbjct: 266 TSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|226952101|ref|ZP_03822565.1| possible signal peptide peptidase SppA [Acinetobacter sp. ATCC 27244] gi|226837157|gb|EEH69540.1| possible signal peptide peptidase SppA [Acinetobacter sp. ATCC 27244] Length = 340 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 27/301 (8%) Query: 5 LKKIKTRYVMLSLVTLT--VVYFSWSSHVEDNSPHVARIAIRGQIE--------DSQELI 54 K + Y++ L+ + S + S H+A + I G I+ +S + Sbjct: 47 FKFLGFAYLLFVLIAMGKGCSTSSTKTTTNITSDHLAVVDIIGTIDSSSGSSTVNSDDTN 106 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAG 111 + ++R + A+ ++++SPGGS + I++ I+ +K + P V + +M AS Sbjct: 107 KALKRAFEASGSKAVALNINSPGGSPVQSDEIWQEIRYLKKQHPDKKVYAVIGDMGASGA 166 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ S K S ++ Sbjct: 167 YYIASAADEIIVNPSSLVGSIGVIMPNYGLSGLAQKLGIEDRTLTSGSNKDILSMTKPLD 226 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P Q +Q V+D+ + F+ V E R + G WTG +A +G+ D G Sbjct: 227 PAQKQHVQSVLDNVHAHFINAVKEGRGKRLKSNDPAIFSGLFWTGEQAVALGVADRSGSM 286 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL------SISSLLEDTIPLMKQTKV 284 + + L ++ + D+ +N + L + ISS L D + + K+ Sbjct: 287 TTLMRDL-------NVSQKVDYTVQRNPFESILGRMGAKIGEGISSSLADQLQTQQNAKI 339 Query: 285 Q 285 Q Sbjct: 340 Q 340 >gi|190576019|ref|YP_001973864.1| putative protease IV [Stenotrophomonas maltophilia K279a] gi|190013941|emb|CAQ47581.1| putative protease IV [Stenotrophomonas maltophilia K279a] Length = 640 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 12/264 (4%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 DN P VA + G+I + + D++ A+++ + SPGG +A Sbjct: 338 DNRPQVAVVVAAGEISGGDLPAGRIGGESTSALLRAARDDENVKAVVLRVDSPGGEVFAS 397 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + ++ KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 398 EQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGMVPNFS 457 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q V++ Y F V+++R P + Sbjct: 458 RALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQSVINKGYADFTGRVADARKKPVE 517 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWF 260 ++ GR+W+GA+AK+ GL+D GG ++ + +++ + Sbjct: 518 AVDEVARGRVWSGAQAKERGLVDAFGGLKDAVADAASRAKLGKADAYRVRYIEKAATPFA 577 Query: 261 CDLKNLSISSLLEDTIPLMKQTKV 284 + + S + ++ Sbjct: 578 QFVSGFAGSRAGAWMLSDSGMARM 601 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEM 106 ++L+ IE D +++ L P G +A + A+Q ++ K ++ M Sbjct: 106 RDLLRVIESAKEDKKIERVVLELDKLQPSG--FASLREVATALQDLRASGKQLVAYSESM 163 Query: 107 AASAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 S YL++ ++ + GS+ G QY DKLGV + K K Sbjct: 164 GQS-QYLLAAQADEVYLDPM---GSVVLEGLGRYRQYF-RTGLQDKLGVDVHLFKVGEYK 218 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTG 215 + P+ +P + + ++ + ++ ++++R + + L +G G Sbjct: 219 SAAEPYVLDAASPASKEADLFWMNDVWQRYLADIAKARRLDPAQLAAGIDTLPEGIAAAG 278 Query: 216 AE----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + A + L+ + +EE + GV Sbjct: 279 GDLAKFALQQKLVTALKTREEFEDLMIERGVADD 312 >gi|16331410|ref|NP_442138.1| protease IV [Synechocystis sp. PCC 6803] gi|2499885|sp|Q55682|Y021_SYNY3 RecName: Full=Putative protease slr0021 gi|1001581|dbj|BAA10208.1| protease IV [Synechocystis sp. PCC 6803] Length = 277 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 127/255 (49%), Gaps = 4/255 (1%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +ARI + G I + +++ ++ + AL+V + SPGG+ + I+ Sbjct: 7 TSTRKKIARIEVTGAIASGTRKAVLKALKTVEE-KKYPALLVRIDSPGGTVVDSQEIYTK 65 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++++ + V+ ++AS G I+ I+A ++ GSIGV+ + ++ L+K+G Sbjct: 66 LKQLSEKIKVVASFGNISASGGVYIAMGCPHIMANSGTITGSIGVILRGNNLERLLEKVG 125 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 VS K +KS P K S E+ P+ ++Q ++D SY FV V+ RN+ +K +D Sbjct: 126 VSFKVIKSGPYKDILSFDRELLPEEQSILQALIDDSYGQFVSTVAAGRNLAVEKVKEFAD 185 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GRI+TG +A ++GL+D +G +E+ Q L G+D ++ PK S Sbjct: 186 GRIFTGQQALELGLVDRLGTEEDARQWAATLAGLDPDKVELDTIEDPKPLVRRLTGGDSQ 245 Query: 269 SSLLEDTIPLMKQTK 283 + D + L + K Sbjct: 246 LQTMADNLGLTESLK 260 >gi|297544279|ref|YP_003676581.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842054|gb|ADH60570.1| signal peptide peptidase SppA, 36K type [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 305 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 13/270 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL----------IERIERISRDDS 65 S+V++ V V S + I I G I + + +E+I + D++ Sbjct: 19 SIVSMFVSMPQQDKGVSTASNTIGVIMIEGVIGQTTNILGIPQNINDPVEQIRKAQEDNA 78 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAA 124 A++V ++SPGGSA I++ ++K+K +I + + AAS GY+++ A +IIVA Sbjct: 79 VRAVVVKINSPGGSAAKSIEIYKELKKLKKTGKKIIVSMGDAAASGGYMVASAGDIIVAN 138 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++ GSIGV+ QY + DKLG+ ++KS P K SP ++ P+ ++++ V++ Sbjct: 139 PATITGSIGVIMQYTNYEGLYDKLGLKEITIKSGPYKDIGSPTRDLTPEEKKILRGVIED 198 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 ++ F+ +VSE R +P DK L+DGRI+TG +A KVGL+D +G + Q Sbjct: 199 TFQQFLEIVSEGRKMPIDKVKELADGRIFTGRQALKVGLVDKLGDFYDAVDIAAKESGIQ 258 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 +K + P L S LED Sbjct: 259 GKPVLKYYATP--TPLSILFGSGAKSNLED 286 >gi|283853641|ref|ZP_06370875.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. FW1012B] gi|283570974|gb|EFC19000.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. FW1012B] Length = 311 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 12/291 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNS-------PHVARIAIRGQIEDSQELIERI 57 L + + LV F H E+ + +AI G I D+ ++ I Sbjct: 15 LFGLLIAVAAVILVIGITAAFGLLGHDEEGGRLLGAATSRIGVVAIEGPITDADAVVAFI 74 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 +++ +DDS +I+ ++SPGG+ + ++ A++K+ KPV+ +AAS GY +C Sbjct: 75 KKLRKDDSVKGVILRVNSPGGAFGPSQEMYMAVKKLGAAKPVVASFSSVAASGGYYAACP 134 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I A ++ GSIGV+ Q+ + L KLGV +S+ + +K +PF + Sbjct: 135 ASRIFANRGTITGSIGVMSQFANAQDLLQKLGVHFESLTTGKLKDAGTPFKPLTDDQRAY 194 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++ F V+ R + D ++DGR TGA AK +GL+D +GGQEE L Sbjct: 195 LAGLIADLNQQFSGDVAAERKLGKDAIATIADGRAMTGARAKDLGLVDELGGQEEAVDYL 254 Query: 238 Y-ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 +G+ + K P K D ++S L D L + V GL Sbjct: 255 KQQVGLTGDVPLYK--GPKKKSGLFDKLTSALS--LPDMKGLALLSLVSGL 301 >gi|222151629|ref|YP_002560785.1| hypothetical protein MCCL_1382 [Macrococcus caseolyticus JCSC5402] gi|222120754|dbj|BAH18089.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 333 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 15/246 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGG 78 D + +ARI I G I D+ Q +++ ++ + + AL++ ++SPGG Sbjct: 52 SDATNQIARIEIDGTIMDTGTPSPFSGESYNHQLILDSLDEVKDNGDIKALMLVVNSPGG 111 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y I I+ VK K V + AAS GY IS ++ I A++ +L GS+GV+ Q Sbjct: 112 GVYESAEIHDKIEAVKEAGKKVYVTMKNTAASGGYYISAPADKIYASKETLTGSLGVIMQ 171 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 K DK GV ++KS P K SP E++ ++Q VD SY FV ++S R Sbjct: 172 SMNYKELADKYGVKFNTIKSGPHKDIMSPTKEMDETERAILQKFVDESYEGFVNVISNGR 231 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ + ++DGRI++G +A+K+ L+D +G + + ++L + ++ +++ P + Sbjct: 232 HMDKAQVKKIADGRIYSGQQAQKLDLVDEIGTEADAMKALKK-EIKAKNAEVIEFSEPDD 290 Query: 258 YWFCDL 263 ++ Sbjct: 291 FFNSKF 296 >gi|213427777|ref|ZP_03360527.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 618 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|307130936|ref|YP_003882952.1| protease IV (signal peptide peptidase) [Dickeya dadantii 3937] gi|306528465|gb|ADM98395.1| protease IV (signal peptide peptidase) [Dickeya dadantii 3937] Length = 616 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 14/280 (5%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 T +Y + N+ +A + G I D +E +I D A++ Sbjct: 308 FTSIYDYAPTPPAANANEIAVVFASGTIVDGKETPGYVGGDTTAAQIRDARLDPKVKAIV 367 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N I+A+ ++L Sbjct: 368 LRVNSPGGSVTASELIRSELAAARQAGKPVVVSMGGMAASGGYWISTPANAIIASPSTLT 427 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + LD +GV V +SP+ A S + +A Q+MQ ++ Y F Sbjct: 428 GSIGIFGVVTTFENSLDSIGVHTDGVATSPLAA-LSQTKALPTEASQLMQLNIERGYQNF 486 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ESR + ++ G +W G++AK GL+D +G ++ + L + + Sbjct: 487 ISLVAESRKKTPQEVDEIAQGHVWVGSDAKTNGLVDQLGDFDDAVKKAAELAKLEHYQLS 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 P D + S + +P Q V A Sbjct: 547 WYSGEPD---LLDAMFNQVRSSVYAMLPSALQAMVPAPVA 583 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 111/309 (35%), Gaps = 66/309 (21%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ VY + + + + + G + D Sbjct: 19 LNFIREFILNLFLVFLILVGIGVYSQFKTPQAEPVRGALLLDLTGVVVDKPSVNNKLRQF 78 Query: 51 -----------------QELIERIERISRDDSATALIVSL------SSPGGSAYAGEAIF 87 ++++ I + D + T +++ L P + + I Sbjct: 79 GREFFGVSGSRHQENALFDIVDSIRQAKDDSNITGMVMDLSDFVSADQP-----SLQYIG 133 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKP 143 +A+++ ++ KP+ + Y ++ +N I G+I G Y K Sbjct: 134 KALREFRDAGKPIFAVGDNFNQT-QYYLASFANKIYLTPQ---GNIDLHGFATNNLYYKT 189 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 LDKL V+ + K+ PF +++P A + + + + ++ V+ +R I Sbjct: 190 LLDKLKVTTHIFRVGTYKSAVEPFIRDDMSPAAREADSRWISTLWQHYLDTVAANRQITP 249 Query: 202 DKTLVLSD----------GRIWTGAEAKKVGLIDVVGGQEEVWQS-LYALGVDQSIRK-- 248 + ++ G T A + L+D V + + QS + A G D + Sbjct: 250 QQLFPGAENLLAGLRALNGD--TARYALENKLVDEVASRSVIEQSFIKAFGWDAKNKNFN 307 Query: 249 ---IKDWNP 254 I D+ P Sbjct: 308 FTSIYDYAP 316 >gi|269958578|ref|YP_003328365.1| putative serine protease [Anaplasma centrale str. Israel] gi|269848407|gb|ACZ49051.1| putative serine protease [Anaplasma centrale str. Israel] Length = 293 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 84/231 (36%), Positives = 142/231 (61%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 +L L+ V Y + N +VAR+ I G+I S+ + R++ DS Sbjct: 24 FFFVVCLLLLIVGQVDYSRLVGTLRRNHDYVARVRISGEISRSRAREAMMARLAESDSVK 83 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 AL++ + SPGG+ EA+++ I+++ +KPV+ + +AAS GY+ + A++ +VA + Sbjct: 84 ALVLRIDSPGGTVGDSEALYQQIREIALKKPVVAVLGNIAASGGYMAAIAADHVVARHGT 143 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIGV+ QY V KLG+++KS+K++P+K+ SP E++P+ ++Q VVD + Sbjct: 144 ITGSIGVISQYIGVAEVAGKLGITLKSIKTAPLKSNMSPLEELSPEGESIIQGVVDDFHV 203 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 +F LV+E R + DK V+SDGRI+TGA+A +VGL+D +GG++E + L Sbjct: 204 FFTDLVAERRGLAPDKVSVVSDGRIYTGAQALQVGLVDAIGGEKEALEWLK 254 >gi|171319456|ref|ZP_02908560.1| peptidase S49 [Burkholderia ambifaria MEX-5] gi|171095307|gb|EDT40290.1| peptidase S49 [Burkholderia ambifaria MEX-5] Length = 330 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS S H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSSDSKFTSGGHHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKHPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V E R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKEGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|218528184|ref|YP_002419000.1| signal peptide peptidase SppA, 36K type [Methylobacterium chloromethanicum CM4] gi|218520487|gb|ACK81072.1| signal peptide peptidase SppA, 36K type [Methylobacterium chloromethanicum CM4] Length = 321 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 95/269 (35%), Positives = 150/269 (55%), Gaps = 9/269 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI+I G I S+ + IER+ ++ +++S+SSPGG+ E ++R ++ + Sbjct: 51 TENQIARISIGGFIAGSESTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRAL 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++ Sbjct: 111 AAKKPMVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 SVKSSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR++ Sbjct: 171 SVKSSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDESQIAAVADGRVF 230 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +G ++ + L+D +GG+ + L +KDW P + F L + + L Sbjct: 231 SGRQSLPLKLVDELGGERQAVAWLEKEKKVPEKLPVKDWKPKADGGFKLWSTLGLGADLL 290 Query: 274 DTIPLMKQTKV---------QGLWAVWNP 293 L + + GL AVW P Sbjct: 291 GLEGLASRLRAVEDEAAGLSGGLLAVWRP 319 >gi|254491611|ref|ZP_05104790.1| peptidase, S49 (protease IV) family [Methylophaga thiooxidans DMS010] gi|224463089|gb|EEF79359.1| peptidase, S49 (protease IV) family [Methylophaga thiooxydans DMS010] Length = 327 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 16/287 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERIS 61 + +++L LV ++ F + H A I I G I E ++ I Sbjct: 49 YVFKAFILLYLVAFLILSFKPAGLKTVTDAHTALIDINGVIAADAEANADAVVTGIREAF 108 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCAS 118 ++A LI+ L++PGGS I I++++ KP V V ++ AS GY I+ A+ Sbjct: 109 DSETAKGLILRLNTPGGSPVQAGIINDEIRRLQKEKPDFPVYAVVQDVCASGGYYIAVAA 168 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I A + S+VGSIGV ++K+GV +S+ + KA PF + V Sbjct: 169 DEIYADKASIVGSIGVRMDSFGFTEAIEKIGVERRSLTAGENKAFLDPFLPMKAADVDHA 228 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 D++D+ + F+ +V E R L G W+G +A ++GLID + +V + L Sbjct: 229 HDMLDNIHQQFITVVKEGRGERLKDNDELFSGLFWSGEQALELGLIDGLASSSKVARELI 288 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 I D+ P NY D + +++ +TI +Q Sbjct: 289 G------AEDIIDYTPRPNYL--DRFAGKLGAVMANTITEKSTWSLQ 327 >gi|313206075|ref|YP_004045252.1| signal peptide peptidase sppa, 67k type [Riemerella anatipestifer DSM 15868] gi|312445391|gb|ADQ81746.1| signal peptide peptidase SppA, 67K type [Riemerella anatipestifer DSM 15868] gi|315023746|gb|EFT36749.1| putative protease IV [Riemerella anatipestifer RA-YM] Length = 584 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 10/249 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 +S +A + G I + E IE I + DD A+++ ++SPGGSA A Sbjct: 298 SKSSEKIAVLYASGNIINGDEATNISDEKYIEYIRDLKDDDDIKAVVLRINSPGGSANAS 357 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I +Q++K +KP+I + AAS GY I+ A + I + ++ GSIGV P K Sbjct: 358 DQILFELQQLKLKKPLIVSFGDYAASGGYYIAMAGDKIYSEPNTITGSIGVFGMIPDFKN 417 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +K G+ V ++ SP S + M+Q+ V+ +Y FV V+++RN +++ Sbjct: 418 LANKNGIRSDVVSTNTNSQMMSPISGITEGTKNMLQNSVEQTYKRFVYFVTKNRNKTFEQ 477 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP--PKNYWFC 261 ++ GR+W+G +AK++GL+D +G + ++ + + P +F Sbjct: 478 VDEIAGGRVWSGKKAKELGLVDELGSLNDAITFAIKKAKVKNYNIVSYPSEINPLEEFFK 537 Query: 262 DLKNLSISS 270 + SIS+ Sbjct: 538 GMDEESIST 546 Score = 87.9 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 87/219 (39%), Gaps = 20/219 (9%) Query: 52 ELIERIERISRDDSATALIVS---LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + I IE+ DD+ + + +++ E+I AI+ K + + Sbjct: 82 DFIRAIEKAKTDDNIKGISIENDNINAG---ITQIESIRNAIEDFKKSGKFVYSYGNSVS 138 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y + ++ + G+ + ++K F ++ G+ I ++ KA PF Sbjct: 139 QPSYFLGSVADKFYLNPAGGIELKGMASEVIFLKDFAEQYGIGINIIRHGKYKAAVEPFL 198 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTGAEAKKV 221 ++++P+ + + ++ ++ ++ SR I + ++DG ++ K Sbjct: 199 RNDISPENKEQLSTLLSDLWNRVSNKIASSRKISIENFQSITDGLYGMIPDFS----LKY 254 Query: 222 GLIDVV---GGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 GL+D + G E + + + D+ + K+ K+ Sbjct: 255 GLVDKLMQKGEYELLLKQKIGIDTDKKLNKVSIRKYIKS 293 >gi|325281704|ref|YP_004254246.1| signal peptide peptidase SppA, 67K type [Odoribacter splanchnicus DSM 20712] gi|324313513|gb|ADY34066.1| signal peptide peptidase SppA, 67K type [Odoribacter splanchnicus DSM 20712] Length = 599 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 141/286 (49%), Gaps = 26/286 (9%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +E N +A + G+I Q EL + I +I D++ A+++ ++SPGGSA Sbjct: 306 IEFNKDKIAVVYASGEIGLEQKNNTIGPELAKTIRKIREDNTVKAIVLRVNSPGGSALTS 365 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+R ++ KPVI + +AAS GY ISCA++ IVA T+L GS G+ + + Sbjct: 366 DIIWREVELATQTKPVIVSMGNVAASGGYYISCAADTIVAEPTTLTGSTGIFGMFFSGEK 425 Query: 144 FLD-KLGVSIKSVKSSPMKAEPSPF--------SEVNPKAVQMMQDVVDSSYHWFVRLVS 194 ++ K+G+ VK++ + + P ++Q+ V+ Y F+ V Sbjct: 426 LIEDKMGIHTDVVKTNDHSDFGGSYPLPLPVSNRALTPYERNVLQNYVNQGYETFLSRVM 485 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQ-SIRKIKDW 252 R + +D+ ++ GR+WTG +A K+GL+DV+GG E+ + + G+++ ++ + Sbjct: 486 SGRGLTHDELHAIAQGRVWTGEDALKIGLVDVLGGLEDAIRIAAQKAGIEKYNLTEYPVV 545 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIP--------LMKQTKVQGLWAV 290 P F + + LL++ + + + + QGL A Sbjct: 546 KSPIEELFAEFTTEVKARLLKEELGTFYTTWEQMKNKVENQGLLAR 591 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 15/200 (7%) Query: 51 QELIERIERISRDDSATALIVSL-SSPG--GSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ I++ ++D + + L G G+ + I A+QK K I + Sbjct: 83 NKILASIQKAAKDSRIQGIYLDLTEIQGNFGALAFTQEIRNALQKFKESGKFIYSYSNLG 142 Query: 108 AS-AGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 S Y ++ ++ I + L G + + K L KLG+ + VK K+ Sbjct: 143 YSQKSYYLATVADKIFVNPETPLLLTG---MSSSISFYKETLAKLGIQPEVVKVGKFKSA 199 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAK 219 PF E++P + +Q +DSS+ V+ ++ESRNIP D L++ R +T + + Sbjct: 200 VEPFISDEMSPANREQVQKYLDSSWGTIVKGIAESRNIPVDSINALAN-RFDFYTTRQFQ 258 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 G D V ++++ L Sbjct: 259 DFGFFDGVLYEDQMLALLKE 278 >gi|148653534|ref|YP_001280627.1| signal peptide peptidase SppA, 36K type [Psychrobacter sp. PRwf-1] gi|148572618|gb|ABQ94677.1| signal peptide peptidase SppA, 36K type [Psychrobacter sp. PRwf-1] Length = 354 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 18/268 (6%) Query: 29 SHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 S V+ PH+A + ++G I ++ ++ + A A++++++SPGGS Sbjct: 88 SSVDVTKPHIAVVDLQGVISADNTANAYDVSAALSEAFESKGAKAVVLNINSPGGSPVQS 147 Query: 84 EAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I++ + ++ P + + +M AS Y I+ A++ I +SLVGSIGV+ Sbjct: 148 DEIWKTMMSLRKEHPNKKLYAVIGDMGASGAYYIASAADEIYVNPSSLVGSIGVIMPGYN 207 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +K +DK GV ++ + K S ++ Q ++ V+D+++ F+ V + R Sbjct: 208 LKGLMDKYGVKDATLTAGEYKDILSMSRDLTDFEKQHIKGVLDNTHKHFIDAVKKGRGDR 267 Query: 201 YD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + L G WTG +A +GL D G L +L + I + D+ P Sbjct: 268 LKNPEENKLFTGLFWTGEQAIALGLADKKGS-------LMSLEKELDIDNVVDYTPVDPM 320 Query: 259 -WFCDLKNLSISSLLEDTIPLMKQTKVQ 285 F + L + S + ++ L + Q Sbjct: 321 QMFLNNFALQLGSGIGSSVELKLLPEEQ 348 >gi|90410825|ref|ZP_01218840.1| putative protease IV [Photobacterium profundum 3TCK] gi|90328456|gb|EAS44754.1| putative protease IV [Photobacterium profundum 3TCK] Length = 617 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 11/224 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + +A + G I D + DD A+I+ + SPGGSA+A E Sbjct: 322 SDNQIAVVVASGAIIDGTQRQGTVGGDSTAALLRDARLDDDIKAVILRVDSPGGSAFASE 381 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + +K KPV+ + +AAS GY IS +++ I+A T++ GSIG+ + Sbjct: 382 IIRNEVDALKQAGKPVVVSMSSVAASGGYWISASADRIIAQPTTITGSIGIFAILTTFEK 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+K+GV V ++P E+ Q+ Q V+ Y F+ LVS+ RN+ ++ Sbjct: 442 GLEKMGVYSDGVGTTPFSGVG-VTRELPEGVGQVFQLGVEHGYKRFIGLVSQYRNMSLEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ GR+WTG +A ++GL+D +G ++ + L ++ Sbjct: 501 ADKIAQGRVWTGQDAMELGLVDQLGDFDDAVAAAVELAKLETYE 544 Score = 92.5 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 120/337 (35%), Gaps = 63/337 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQ-------- 51 + F + I + L ++ V F++ + A I + G I + + Sbjct: 19 ISFTRQLILNLF-FLIIIGAIFVAFNYGEDTPEQPDKAALILDLSGPIVEQRRYINPIDS 77 Query: 52 -----------------ELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAI 90 ++ E I + S D+ L+++L G + I +AI Sbjct: 78 IASNALGQPPAQENILFDITETIRKASTDNKIEGLVLNL---KGMSETSLTKLRYIAKAI 134 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPF 144 + K KPV S Y ++ ++ + + GV+ Y K Sbjct: 135 AEFKAAGKPVYAYGDNFGQS-QYYLASYADKVFMSPDG-----GVMLTGYGSYSLYYKSL 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+KL V+ + K+ P++ +++ A + ++ + F V+ +R+I Sbjct: 189 LEKLNVNTHVFRVGTYKSFVEPYTRDDMSAPAREANTVWLNQLWGAFTTDVANNRHIDAA 248 Query: 203 ----------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL---YALGVDQSIRKI 249 + L DG + K+GL+D + + ++ + + + S +I Sbjct: 249 TLTPNIDDFVQELKAVDGDF--AKLSLKMGLVDELISRPQLRNKMIEEFGSDGEHSFNQI 306 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + DL + + +++ + ++ T+ QG Sbjct: 307 SYYEYQPTIINTDLPSDNQIAVVVASGAIIDGTQRQG 343 >gi|62179887|ref|YP_216304.1| protease 4 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127520|gb|AAX65223.1| protease IV, a signal peptide peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 618 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLA 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 584 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 97/272 (35%), Gaps = 41/272 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + + + + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQIGNGSNSEQTARGALLLDISGVIVDKPSTNHRLGALGRQLFG 86 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFRAIQKVKNR-K 97 +++ I + D + T +++ L + G+ I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + V G Y K LDKL VS + Sbjct: 147 PVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGR 211 K+ PF +++P A + + + ++ VS +R I + + DG Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLFPGAQAIIDGL 265 Query: 212 IWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 G + A L+D + +V ++L Sbjct: 266 TSVGGDTAKYAFDHKLVDALASSADVEKALTK 297 >gi|283833434|ref|ZP_06353175.1| signal peptide peptidase SppA [Citrobacter youngae ATCC 29220] gi|291071088|gb|EFE09197.1| signal peptide peptidase SppA [Citrobacter youngae ATCC 29220] Length = 618 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 15/283 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 V Y+ ++ D + I G I D +E +I D A++ Sbjct: 310 AVSYYDYTLKTPADTGESIGVIFANGAIMDGEETPGNVGGDTTAAQIREARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 370 LRVNSPGGSVSASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDSIGVHTDGVATSPLADI-SITKALPPEVQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 489 ITLVADARKTTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHI 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKVQGLWAV 290 + + + + ++S S ++L + I M + +V Sbjct: 548 EYYQDEPTFMDMVIDSMSGSVRAMLPEAIQAMLPPPLASAASV 590 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 115/303 (37%), Gaps = 56/303 (18%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS-------- 50 + FV + + ++ L LV + + SS+ +++ A + I G I D Sbjct: 19 LNFVREFVLNLFFIFLVLVGVGIWMQVSSSNTSEHAERGALLLDISGVIVDKPSSTSRLS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 +++ I + D + T +++ L + G+ + I +A+ Sbjct: 79 VIGRQLFGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGADQPSMQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLD 146 ++ ++ KPV V + + Y ++ +N I + GS+ G Y K LD Sbjct: 139 REFRDSGKPVFA-VGDNFSQGQYYLASFANKIYLSPQ---GSVDLHGFATNGLYYKSLLD 194 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 KL VS + K+ PF +++P A + + + ++ V+ +R IP + Sbjct: 195 KLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLDTVAANRQIPAQQV 254 Query: 205 LVLS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIK 250 + DG T A L+D + EV + L D++ R + Sbjct: 255 FPGAQAMLDGLTKVDGD--TAKYALDNKLVDALASSAEVEKILTKQFGWSKADKNFRAVS 312 Query: 251 DWN 253 ++ Sbjct: 313 YYD 315 >gi|229521906|ref|ZP_04411323.1| protease IV [Vibrio cholerae TM 11079-80] gi|229340831|gb|EEO05836.1| protease IV [Vibrio cholerae TM 11079-80] Length = 616 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 131/289 (45%), Gaps = 20/289 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAIVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRHEVEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A + +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-MTTGLTQGAKEAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ + L + Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVRLAANLAHLERY 544 Query: 247 RKI---KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 K P + ++ L + +S L+ + + +Q L W Sbjct: 545 NLYWVEKPLTPVQQFFQDLLGQVRVSLGLD--VSTLLPKSLQPLAVEWQ 591 Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A K+VGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKEVGLVDELATRQQVRQTLAE 294 >gi|146299478|ref|YP_001194069.1| signal peptide peptidase SppA, 67K type [Flavobacterium johnsoniae UW101] gi|146153896|gb|ABQ04750.1| signal peptide peptidase A, SppA, 67K type [Flavobacterium johnsoniae UW101] Length = 585 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 11/241 (4%) Query: 35 SPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +A I +G+I + + ++ +++ A+++ + SPGGSA + Sbjct: 301 DDQIAIIYAQGEIAGGEGDVNVIGEGSMRRSLQEARKNEDVKAIVLRIDSPGGSALTSDL 360 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+R I+ K KPV+ + AAS GY I+C ++ I A ++ GSIGV P P Sbjct: 361 IWREIEITKKVKPVVVSMGNYAASGGYYIACNADKIFAESNTITGSIGVFGVLPNFTPLA 420 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLG++ + VK+ A SPF V+ K + V+ Y FV V+E R + + + Sbjct: 421 NKLGINTEQVKTHENSANYSPFVPVDEKFKAFTLEGVEQIYKTFVTHVAEGRKMTFAQVD 480 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEE--VWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+W+G EA K+GL+D +GG + + A D S + ++ + +L Sbjct: 481 SIAQGRVWSGTEAVKIGLVDKIGGLNDAIAEAAKIAKIKDYSTQNYPEYEKKFSDLMANL 540 Query: 264 K 264 Sbjct: 541 P 541 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 96/224 (42%), Gaps = 10/224 (4%) Query: 52 ELIERIERISRDDSATAL-IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++I IE D + + I++ S G A + + A++ K K V + + Sbjct: 79 DVINAIEAAKTDSNIKGISILNDQSSLGLA-QYKDLRNALESFKKSGKFVWAYANTYSQK 137 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ +N I + G+ + + K F +K G+ ++ ++ K+ PF E Sbjct: 138 E-YYLNSVANTIYLNPAGDLDFKGLSSEVMFFKDFQEKSGIHMEVIRHGKYKSAVEPFLE 196 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGAEAKKVGLIDV 226 ++ + + +++S + +S+SRNIP DK +++G + T AK L+D+ Sbjct: 197 NKMSDANREQVTALLNSIWSTVCSDISKSRNIPVDKLNEIANGLLARTPEMAKAQHLVDI 256 Query: 227 VGGQE---EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 V ++ + + D KI + +N L N++ Sbjct: 257 VAYEDVYHNAIKKALKVKGDDDYNKISILDYTQNNMNTALTNIA 300 >gi|167854498|ref|ZP_02477279.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Haemophilus parasuis 29755] gi|167854253|gb|EDS25486.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Haemophilus parasuis 29755] Length = 621 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 133/269 (49%), Gaps = 17/269 (6%) Query: 22 VVYFSWSSHVED-----NSPHVARIAIRGQI---------EDSQELIERIERISRDDSAT 67 + +F +S + D +A + + G I S +++ + + DD Sbjct: 306 IDFFDYSLSLSDRFNVVGKDKIAIVNVEGAIVLGESDDEVAGSDTIVKLLRKAREDDDVR 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ ++SPGGSA A E I + ++ ++ KPV+ + MAAS GY I+ S+ I+A+ T Sbjct: 366 GVVLRINSPGGSAMASELIRQEVEDLQQAGKPVVASMGGMAASGGYWIAATSDKIIASPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + KLGV+ V +SP A+ + ++ + +++Q +++ Y Sbjct: 426 TLTGSIGIFGLAVSFEKTAKKLGVNEDGVSTSPF-AQQTALKSLSKEQSELIQISIENGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LVS+ R + ++ G++W G A + GL+D +G ++ + +L L ++ Sbjct: 485 DRFLELVSKGRKMSKGDVDKVAQGQVWLGESAFEKGLVDELGDFDDAYHALTILINEKRK 544 Query: 247 RKIK-DWNPPKNYWFCDLKNLSISSLLED 274 K + + W D + IS ++ D Sbjct: 545 AKGETEIERFSTQWLIDESDDLISQVMRD 573 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 91/240 (37%), Gaps = 43/240 (17%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA------RIAIRGQIED------ 49 EFV+ + +VML + + WSS ++ V + + G + D Sbjct: 17 EFVISLVFILFVMLGFAFMAL----WSSDAANSKTPVEFSKGALLLNLDGYLADNHDEFS 72 Query: 50 --------------------SQELIERIERISRDDSATALIVSLSSP--GGSAYAGEAIF 87 + +++ I++ D+ T L++ L S GG + + Sbjct: 73 DFNRFLRSELGGTNEPIKISTFDVVRAIKKAQYDEKITGLVLDL-SYFEGGDIPSLTFVG 131 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + I++ K KPVI + Y ++ ++ I + V G+ + Y K LD Sbjct: 132 KEIERFKQSNKPVIAIGEGYSQQ-QYYLASYADKIYLNKAGFVDLHGLNYSTLYFKSLLD 190 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+ V + K+ PF +++ +A Q Q + + F ++++R I + Sbjct: 191 KIEVVPHIFRVGTYKSAVEPFLRDDMSAEARQNAQLWLSQLWANFSSAIAKNRQIDANTI 250 >gi|299769100|ref|YP_003731126.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. DR1] gi|298699188|gb|ADI89753.1| putative protease; putative signal peptide peptidase sppA [Acinetobacter sp. DR1] Length = 338 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWS---SHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S S V +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTSKEGSAVSSSSAHLAVVDIIGTIDASSNQSVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K + P V + +M AS Sbjct: 104 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKQHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +P Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 DPVQKQHIQSVLDNVHTHFITAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + K+Q Sbjct: 284 ITSLMREL---NLDNKVDYTIERNPLQSILGRMGAQIGQGVSESIAQEVQTRQSAKLQ 338 >gi|163849634|ref|YP_001637677.1| signal peptide peptidase SppA, 36K type [Methylobacterium extorquens PA1] gi|163661239|gb|ABY28606.1| signal peptide peptidase SppA, 36K type [Methylobacterium extorquens PA1] Length = 321 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 9/269 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI+I G I S + IER+ ++ +++S+SSPGG+ E ++R ++ + Sbjct: 51 TENQIARISIGGFIAGSDSTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRAL 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++ Sbjct: 111 AAKKPMVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 SVKSSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR++ Sbjct: 171 SVKSSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDESQIAAVADGRVF 230 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +G ++ + L+D +GG+ + L +KDW P + F L + + L Sbjct: 231 SGRQSLPLKLVDELGGERQAVAWLEKEKKVPEKLPVKDWKPKADGGFKLWSTLGLGADLL 290 Query: 274 DTIPLMKQTKV---------QGLWAVWNP 293 L + + GL AVW P Sbjct: 291 GLDGLASRLRAVEDEAAGLSGGLLAVWRP 319 >gi|282860141|ref|ZP_06269217.1| signal peptide peptidase SppA, 67K type [Prevotella bivia JCVIHMP010] gi|282587128|gb|EFB92357.1| signal peptide peptidase SppA, 67K type [Prevotella bivia JCVIHMP010] Length = 592 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 2/244 (0%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 +G++ D+Q++ + + +++ ++S A+++ ++S GGSAYA E I+ I ++K +KPV+ Sbjct: 325 AQGEVIDAQKVCKDLAKLAEEESVKAVVLRINSGGGSAYASEQIWHQIMELKKQKPVVVS 384 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMK 161 + +AAS Y S +N IVA T+L GSIG+ +P L +KLGV V ++ Sbjct: 385 MGGLAASGAYYSSAPANWIVANPTTLTGSIGIFGMFPDTSGLLTEKLGVKFDEVATNKYA 444 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 A SP N ++++ +D Y F V+E R + + L+ G ++TG AK + Sbjct: 445 AFGSPARPFNADELRILGQYIDRGYALFRHRVAEGRKMTEQQVEQLAQGHVYTGEYAKTI 504 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 GL+D +GG + L I D+ P + ++ + + L++ + Sbjct: 505 GLVDELGGIDVAIAKAAKLARLTDYA-IADYPAPMGWLEQLMQQNVVDNYLDEKLKAQLG 563 Query: 282 TKVQ 285 Q Sbjct: 564 DFYQ 567 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 107/276 (38%), Gaps = 42/276 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------- 52 FV I ++ S++ L + + ++DNS V I + G + D + Sbjct: 16 FVAGFIFVAFLFGSIMLLALAVDGDETEIKDNS--VLAINLTGIMNDRERGSNPLEKLVG 73 Query: 53 ----------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR------ 96 ++ IE +D + + A+ ++ + +Q+ + Sbjct: 74 EVATPVSLNTFLQGIEEAKTNDKVKGIYLEA-----GAFQADS-YATLQEARKALVDFEK 127 Query: 97 --KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 K VI A Y ++ A+ + + ++ GV Q ++K L K GV ++ Sbjct: 128 SGKWVIAYADTYTQQA-YYLASAATKVYLNPSGMIDWHGVASQPMFLKDALAKFGVKMQV 186 Query: 155 VKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K K+ F+E ++ + + + ++ V+ V SR + + +D I Sbjct: 187 AKVGKYKSATEMFTEDKMSEPNREQTKAFISGIWNNVVKEVGASRKLTTAQLNQYADSAI 246 Query: 213 WTGA--EAKKVGLIDVVGGQEEVWQ-SLYALGVDQS 245 A + +++ L+D + +++ + + +GVD + Sbjct: 247 TFAAPTDYQRMKLVDGLLYTDQIKKVVMAKMGVDDA 282 >gi|51473706|ref|YP_067463.1| protease IV [Rickettsia typhi str. Wilmington] gi|51460018|gb|AAU03981.1| probable protease IV [Rickettsia typhi str. Wilmington] Length = 304 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 133/243 (54%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 + N ++A + I G I + ++ +++++I + ALIV+++SPGG+ E I+ Sbjct: 47 SINSNEDYIASVLIDGIILEDEKRDKKLKKIIDNSHIKALIVNVNSPGGTVVGSEKIYNI 106 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q V KLG Sbjct: 107 LRKISAKKPVVVVMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEVTELAQKLG 166 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + KS KA P+P ++ + + + ++ +Y +F+ LVSE R++P ++ L+D Sbjct: 167 IKFNNFKSGAFKAVPNPTEKLTEEVRVAVMENIEDTYKFFIELVSERRSLPIEEVHKLAD 226 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GR+++G +A K+ L+D +G ++ + L + +KD+ ++ + Sbjct: 227 GRVYSGRQAFKLRLVDTIGSEDTALKWLQEIKKIDINLTVKDYQLKPKSTLIEIMFEDFT 286 Query: 270 SLL 272 SL+ Sbjct: 287 SLV 289 >gi|194438574|ref|ZP_03070663.1| protease 4 [Escherichia coli 101-1] gi|194422584|gb|EDX38582.1| protease 4 [Escherichia coli 101-1] gi|323937024|gb|EGB33304.1| signal peptide peptidase SppA [Escherichia coli E1520] gi|323962014|gb|EGB57612.1| signal peptide peptidase SppA [Escherichia coli H489] gi|323972549|gb|EGB67753.1| signal peptide peptidase SppA [Escherichia coli TA007] Length = 622 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|256018039|ref|ZP_05431904.1| protease 4 [Shigella sp. D9] gi|332279079|ref|ZP_08391492.1| protease IV (signal peptide peptidase) [Shigella sp. D9] gi|332101431|gb|EGJ04777.1| protease IV (signal peptide peptidase) [Shigella sp. D9] Length = 618 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KP + + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPAVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVNLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|253773279|ref|YP_003036110.1| protease 4 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161824|ref|YP_003044932.1| protease 4 [Escherichia coli B str. REL606] gi|297519580|ref|ZP_06937966.1| protease 4 [Escherichia coli OP50] gi|242377487|emb|CAQ32240.1| protease IV, subunit of protease IV, a signal peptide peptidase [Escherichia coli BL21(DE3)] gi|253324323|gb|ACT28925.1| signal peptide peptidase SppA, 67K type [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973725|gb|ACT39396.1| protease IV (signal peptide peptidase) [Escherichia coli B str. REL606] gi|253977919|gb|ACT43589.1| protease IV (signal peptide peptidase) [Escherichia coli BL21(DE3)] gi|309701988|emb|CBJ01302.1| protease IV [Escherichia coli ETEC H10407] Length = 618 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|88807555|ref|ZP_01123067.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 7805] gi|88788769|gb|EAR19924.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 7805] Length = 270 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 128/252 (50%), Gaps = 5/252 (1%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 IAI G I S + +++ + + AL++ + SPGG+ + I A+ +++ + Sbjct: 16 IAIEGAISGSTRRRVLKALREVQE-REFPALLLRIDSPGGTVGDSQEIHAALLRLREKGC 74 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G + A+ IVA ++ GSIGV+ + + LDK+G+ ++VKS Sbjct: 75 RVVASFGNISASGGVYVGVAAETIVANPGTITGSIGVILRGNNLSELLDKIGIRFETVKS 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++P+ Q++QD++DSSY FV V+E R + D +DGR+++GA+ Sbjct: 135 GTYKDILSPDRALSPEERQLLQDLIDSSYSQFVDAVAEGRGLEPDAVRAFADGRVFSGAQ 194 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 AK +GL+D +G +E L +D+ + P+ L S+ S + + Sbjct: 195 AKDLGLVDELGDEEHARVLAARLADLDEERCRPVTLGKPRKSLLQGLPGSSLLSAMHQRL 254 Query: 277 PLMKQTKVQGLW 288 + Q LW Sbjct: 255 NTELELSGQLLW 266 >gi|119774858|ref|YP_927598.1| signal peptide peptidase SppA, 67K type [Shewanella amazonensis SB2B] gi|119767358|gb|ABL99928.1| signal peptide peptidase SppA, 67K type [Shewanella amazonensis SB2B] Length = 617 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 14/267 (5%) Query: 36 PHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 V I +G I + + + I DDS AL++ + SPGGSA+A E I Sbjct: 328 DSVGVIVAKGTILNGFQAPGDIGGKSTSQLIRDARFDDSIKALVLRVDSPGGSAFASEEI 387 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + +K KPV+ + MAAS GY IS +++ I A T+L GSIG+ + L Sbjct: 388 RQELLALKAAGKPVVVSMGSMAASGGYWISASADYIYATPTTLTGSIGIFGLMTTFEDSL 447 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +GV V +S A SPF ++PK +Q ++ Y F+ LV+ R++ ++ Sbjct: 448 AAIGVHADGVATSEWAAH-SPFRPLSPKLESAIQRNIERGYKEFITLVANERDMTLEQVD 506 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYWFCDLK 264 ++ GR+W+G +A ++GL+D +G + L + ++ + F Sbjct: 507 AIAQGRVWSGKKALELGLVDEIGDMPQALAKAAELAGMATFDIQLIEQQMSPEELFIQEM 566 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVW 291 S+S+ L + VQ L VW Sbjct: 567 FASVSAWLPQQTQ--QSDVVQSLLRVW 591 Score = 74.8 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 102/288 (35%), Gaps = 48/288 (16%) Query: 1 MEFVLK---KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------- 50 + FV K I +++ ++ + +V S + S + + G + D Sbjct: 19 INFVRKLIINIVFFPILILVLIVGIVALSTEDELRIESGSALVLDLSGNLVDQARRVDPL 78 Query: 51 ------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI---FRA 89 +++ IE + D+ A+++ L G + A Sbjct: 79 TQLMRQGNQNSEDTEVLLSDVLYVIENATHDERIGAIVLDL---GNMRAGISKLTAVGEA 135 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + + + + + + + Y ++ ++ I V G Y K L+KL Sbjct: 136 LNGFRETGKKVVAIGDWYSRSQYFLASYADEIYLNPRGEVFIDGYAAYNLYFKSALEKLK 195 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ P+ +++P A + Q ++D + + V+++R I + ++ Sbjct: 196 VNTHVFRVGTYKSAVEPYIRDDMSPAAKEATQLLIDDLWGSYADTVAKNRGIETGELVLD 255 Query: 208 S----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + DG + A A K G +D + E ++ L + Sbjct: 256 ADTYLARLDANDGD--SAALAVKQGWVDALMSDEAFRSAMVELVGEDK 301 >gi|301020953|ref|ZP_07185005.1| signal peptide peptidase SppA [Escherichia coli MS 196-1] gi|299881708|gb|EFI89919.1| signal peptide peptidase SppA [Escherichia coli MS 196-1] Length = 622 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 319 >gi|261339471|ref|ZP_05967329.1| signal peptide peptidase SppA [Enterobacter cancerogenus ATCC 35316] gi|288318284|gb|EFC57222.1| signal peptide peptidase SppA [Enterobacter cancerogenus ATCC 35316] Length = 618 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 14/276 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIV 71 +Y + +D+ +A + G I D QE +I D A+++ Sbjct: 311 ISMYDYAAKKPDDSGDSIAVVFANGAIMDGQETPGNVGGDTTASQIRDARLDPKVKAIVL 370 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L G Sbjct: 371 RVNSPGGSVSASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTG 430 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ V+ LD LGV V +SP+ S + P+ +MMQ +++ Y F+ Sbjct: 431 SIGIFGVINTVENSLDYLGVHTDGVATSPLADV-SVTKSLPPEVSEMMQLSIENGYKRFI 489 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV++SR ++ ++ G +WTG +AK GL+D +G ++ + L + + Sbjct: 490 TLVADSRKKTPEQIDQIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELAKLKQ-WHVD 548 Query: 251 DWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + +++ + ++S+S ++L + + V Sbjct: 549 YYQDEPSFFDMVMNSMSVSVRAMLPEAMQAYLPAPV 584 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 106/281 (37%), Gaps = 44/281 (15%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS-------- 50 + FV + ++ L LV + + S+ +S A + I G I D Sbjct: 19 LNFVRNLVMNIFFIFLVLVCVGIWMHISSTSQAQHSTRGALLLDITGVIVDKPSTSNRLG 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L G+ + I +A+ Sbjct: 79 VIGRQLFGATSDRLQENSLFDIVDTIRQAKDDRNITGIVLDLKDFAGADQPSMQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KPVI V + + Y ++ +N I + V G Y K LDKL Sbjct: 139 REFRDAGKPVIA-VGDSYSQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF +++P A + + + ++ ++ +R I ++ Sbjct: 198 VTTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLGTIAANRQITKEQVFPG 257 Query: 208 SDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + G + G A L+D +G +V ++L Sbjct: 258 AQG-VLDGLRKADGDTAKYALDNKLVDALGSSADVEKALTK 297 >gi|16129720|ref|NP_416280.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. MG1655] gi|89108605|ref|AP_002385.1| protease IV [Escherichia coli str. K-12 substr. W3110] gi|170081423|ref|YP_001730743.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. DH10B] gi|238900980|ref|YP_002926776.1| protease IV (signal peptide peptidase) [Escherichia coli BW2952] gi|256022570|ref|ZP_05436435.1| protease 4 [Escherichia sp. 4_1_40B] gi|307138425|ref|ZP_07497781.1| protease 4 [Escherichia coli H736] gi|34395936|sp|P08395|SPPA_ECOLI RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase gi|1742877|dbj|BAA15557.1| protease IV [Escherichia coli str. K12 substr. W3110] gi|1788064|gb|AAC74836.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. MG1655] gi|169889258|gb|ACB02965.1| protease IV (signal peptide peptidase) [Escherichia coli str. K-12 substr. DH10B] gi|238863289|gb|ACR65287.1| protease IV (signal peptide peptidase) [Escherichia coli BW2952] gi|260449112|gb|ACX39534.1| signal peptide peptidase SppA, 67K type [Escherichia coli DH1] gi|315136407|dbj|BAJ43566.1| protease 4 [Escherichia coli DH1] gi|323940567|gb|EGB36758.1| signal peptide peptidase SppA [Escherichia coli E482] Length = 618 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|240136833|ref|YP_002961300.1| putative peptidase [Methylobacterium extorquens AM1] gi|254558708|ref|YP_003065803.1| peptidase [Methylobacterium extorquens DM4] gi|240006797|gb|ACS38023.1| putative peptidase [Methylobacterium extorquens AM1] gi|254265986|emb|CAX21736.1| putative peptidase [Methylobacterium extorquens DM4] Length = 321 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 9/269 (3%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI+I G I S + IER+ ++ +++S+SSPGG+ E ++R ++ + Sbjct: 51 TENQIARISIGGFIAGSDSTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRAL 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++ Sbjct: 111 AAKKPMVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 SVKSSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR++ Sbjct: 171 SVKSSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDESQIAAVADGRVF 230 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +G ++ + L+D +GG+ + L +KDW P + F L + + L Sbjct: 231 SGRQSLPLKLVDELGGERQAVAWLEKEKKVPEKLPVKDWKPKADGGFKLWSTLGLGADLL 290 Query: 274 DTIPLMKQTKV---------QGLWAVWNP 293 L + + GL AVW P Sbjct: 291 GLEGLASRLRAVEDEAAGLSGGLLAVWRP 319 >gi|303245615|ref|ZP_07331898.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] gi|302492878|gb|EFL52743.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] Length = 311 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 113/213 (53%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 S + P + + I G I +++++ I ++ D S +++ ++SPGG+ + + Sbjct: 44 GGSLLGAAEPRIGVVRIEGPIVAAEDVVAFIRKLREDKSVKGVVLRVNSPGGAFGPSQEM 103 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + A++K++ KPV+ +AAS GY +C + I A ++ GSIGV+ Q+ V+ L Sbjct: 104 YMAVKKLRAVKPVVASFSAVAASGGYYAACPAGRIFANPGTITGSIGVMTQFANVRDLLQ 163 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ +S+ + +K SPF + ++ ++D F V++ R + D Sbjct: 164 KLGIDFESLTTGKLKDAGSPFKPLTDDQRAYLKGLIDDLNKQFSGDVAKQRKLAKDAIAA 223 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++DGR TGA A ++GL+D +GGQEE L Sbjct: 224 IADGRAMTGARALELGLVDELGGQEEAVDYLKK 256 >gi|300723417|ref|YP_003712720.1| protease IV, a signal peptide peptidase [Xenorhabdus nematophila ATCC 19061] gi|297629937|emb|CBJ90557.1| protease IV, a signal peptide peptidase [Xenorhabdus nematophila ATCC 19061] Length = 629 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 27/280 (9%) Query: 32 EDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +N ++A I G I DS L+E++ + + A+++ ++SPGGS A Sbjct: 326 SNNDSNIAVIIAEGAILEGKQSSGVVDSDALVEQLREARHNPNIKAIVLRVNSPGGSIGA 385 Query: 83 GEAIFRAIQKVK--------NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 E I + + N KPV+ + +AAS GY IS ++ I+A +L GSIGV Sbjct: 386 SELIRAELVAARYDKENNGKNAKPVVVSMGGLAASGGYWISTPADYIIADPNTLTGSIGV 445 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L+ +GV+ + ++P+ S +N ++Q ++SSY+ F+ LV+ Sbjct: 446 FGVLQTFEKTLNYIGVNADGISTTPLADI-SATKGLNQAVSDVIQLSIESSYNKFIALVA 504 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 ++RN P ++ ++ GR+W G +AKK GL+D +G ++ + L + + DW Sbjct: 505 KARNKPVNEIDNMAQGRVWDGLDAKKQGLVDQLGDFDDAVKKAAELANIKHVSL--DWMQ 562 Query: 255 PKNYWFCDLKNLSISS-------LLEDTIPLMKQTKVQGL 287 P+ + + +S +++ +P QGL Sbjct: 563 PELSFSEKIMVGLTTSAHAFLPNMMQSMLPAPFTQVAQGL 602 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 13/166 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHE 105 ++++ I R D T +++ L+ + I +AI + K KPV +++ Sbjct: 99 DVVDSIRRAKNDPKITGMVLKLN----EFTGADQPSIKYIGKAINEFKTTGKPVFA-IND 153 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y ++ +N I + +V G Y K LD L VS + K+ Sbjct: 154 HYTQPQYYLASFANEIYLSPQGVVDLHGFSTNQLYYKSLLDTLKVSTHIFRVGTYKSAVE 213 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 P + ++ +A + ++ ++ ++ ++ +R I D+ + Sbjct: 214 PMLRNNMSEEAREADSLWLNRMWNNYLSTIAINRGISADQVFPGAT 259 >gi|262373137|ref|ZP_06066416.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] gi|262313162|gb|EEY94247.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] Length = 345 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 19/297 (6%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDN--SPHVARIAIRGQIE--------DSQELI 54 K + Y+++ L+ ++ + + + S H+A + I G I+ +S++ Sbjct: 52 FKCLGFAYLLIVLIAMSKSCSTTTEKATTSISSDHLAVVDIIGTIDSSSSQSAVNSEDTN 111 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAG 111 + ++R + A+ ++++SPGGS + I++ I+ +K + K V + +M AS Sbjct: 112 KALKRAFEASGSKAIALNINSPGGSPVQSDEIWQEIRYLKKQYPAKKVYAVIGDMGASGA 171 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ S K S +N Sbjct: 172 YYIASAADEIIVNPSSLVGSIGVIMPNYGLSGLTQKLGIEDRTLTSGNNKDILSMTKPIN 231 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P +Q V+D+ + F+ V E R + G W+G +A +G+ D G Sbjct: 232 PTQQAHVQSVLDNVHSHFINAVKEGRGKRLKSNDPAIFSGLFWSGEQAIALGVADRSGSL 291 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L V+Q + NP ++ ISS L + + K+Q Sbjct: 292 TTLMRDL---KVEQKVDYTVQHNPLESILGRMGTKIGEGISSSLATQLDTQQNAKLQ 345 >gi|258626525|ref|ZP_05721365.1| Protease IV [Vibrio mimicus VM603] gi|258581236|gb|EEW06145.1| Protease IV [Vibrio mimicus VM603] Length = 642 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + V+ + +A + G I D + + D + Sbjct: 332 AISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 391 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 392 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 451 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 452 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-VTTGLTQGAKDAIQLGIEHGY 510 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 511 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 570 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D + + +Q L W Sbjct: 571 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLD-VSALLPKSLQPLATEWQ 617 Score = 85.2 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 102/275 (37%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + + A I + G I + Sbjct: 47 FIRLALTNLIFLLSIGIIYFIYVHADAPMPSVNKASALILNLSGPIVEQSTHINPMDSFA 106 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D++ T L+++L P + I +AI + K+ Sbjct: 107 GSVFGEELPRENVLFDIVDTLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKS 166 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 167 SGKPVYAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 225 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 226 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIAIKTLTPTMDEFV 285 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A K+VGL+D + +++V Q+L Sbjct: 286 AQLKEVGGDLAALSKQVGLVDELATRQQVRQTLAE 320 >gi|212703644|ref|ZP_03311772.1| hypothetical protein DESPIG_01689 [Desulfovibrio piger ATCC 29098] gi|212672939|gb|EEB33422.1| hypothetical protein DESPIG_01689 [Desulfovibrio piger ATCC 29098] Length = 363 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 3/260 (1%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 F S S +A + + G I D + I+++ R ++V + SPGG A A Sbjct: 100 AAFMVSQATGLGSERIALVRVTGPIMDIDAQLRWIDKLGRMPGVKGVLVRVDSPGGGAAA 159 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++ A+ ++ KP+ + AAS G ++S A + A +++ GSIGV P ++ Sbjct: 160 SQELYEALARLGKDKPIAVSMGSTAASGGLMVSMAGKRVFANASTVTGSIGVRMDIPQIR 219 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDKLG+ +++ ++P K S + Q V+ + FV +V++ R++ Sbjct: 220 GLLDKLGLGRQTLTTAPYKDAGSMLEPLTADEKAYFQGVLKDMHEQFVDIVAQGRHMDRT 279 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L+ G+I+TG EA ++GL+D +GGQ+ + L + + R + +W Sbjct: 280 RAARLATGKIFTGREAVELGLVDELGGQQAAHRWLADVCKVPADRPLLTPPSEDEWWEKS 339 Query: 263 LK---NLSISSLLEDTIPLM 279 LK L +LL P Sbjct: 340 LKTWFGLDADALLGREAPAF 359 >gi|91974675|ref|YP_567334.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB5] gi|91681131|gb|ABE37433.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Rhodopseudomonas palustris BisB5] Length = 326 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 89/274 (32%), Positives = 155/274 (56%), Gaps = 15/274 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 S +ARI I G I + E +E +ER+ + SA A+IV ++SPGG+ E ++ A+ ++ Sbjct: 50 TSSSIARIKIDGLIRSNSERVEALERLEKSQSA-AVIVHINSPGGTTAGSEELYNALMRL 108 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K +KP++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP V + +GV ++ Sbjct: 109 KAKKPMVVVVEGLAASGGYIAALASDHIIAQQSSLVGSIGVLFQYPNVSELMKTVGVKVE 168 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 VKSSP+KA P+ F +P+A ++ +V SY WF +V + R++ ++ V++DGR++ Sbjct: 169 EVKSSPLKAAPNGFEPTSPEARAALESLVRDSYAWFRDMVKQRRSMDDNQLGVVADGRVF 228 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 TG +A + LID +G ++ L +S ++D+ + ++ S L+ Sbjct: 229 TGRQALGLKLIDELGDEKTAVAWLETEKKIKSGLPVRDFKLSPQFGDLAFLRVAASVTLD 288 Query: 274 --------------DTIPLMKQTKVQGLWAVWNP 293 + +++ + G+ A+W P Sbjct: 289 ALGLGAIARQIEQSGAVQSVERLGLDGMLALWAP 322 >gi|186681712|ref|YP_001864908.1| signal peptide peptidase SppA, 67K type [Nostoc punctiforme PCC 73102] gi|186464164|gb|ACC79965.1| signal peptide peptidase SppA, 67K type [Nostoc punctiforme PCC 73102] Length = 611 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 11/239 (4%) Query: 33 DNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + +A + G+I + ++ +D A+++ ++SPGGSA A Sbjct: 314 SSKNQIAVVYAEGEIVDGKGDGGQVGGDRFAKIFNKLRQDKDVKAVVLRINSPGGSATAA 373 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E + R ++ + KPV+ + ++AAS GY I+ SN I A ++ GSIGV + Sbjct: 374 EVMQREVKLTREVKPVVVSMGDVAASGGYWIASDSNRIFAEPNTITGSIGVFGLLFNGEK 433 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 G++ SVK+ + +P+ + + Q V+ Y+ F+ VS+ R +P K Sbjct: 434 LASDNGITWDSVKTGTYADSQTVSRPKSPQELALYQRSVNRIYNMFLNKVSQGRKLPEQK 493 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G AK++GL+D +GG +++++ P+ F + Sbjct: 494 VAEIAQGRVWSGVAAKEIGLVDEIGGLNSAIAYAVKEAKLGEDWEVQEY--PRTSSFGE 550 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 115/272 (42%), Gaps = 13/272 (4%) Query: 21 TVVYFSWSSHVEDNSPH---VARIAIRGQIEDS---QELIERIERISRDDSATALIVSLS 74 +V+ F S + D+ P + + I G ++ ++++E +E+ RD + + + Sbjct: 51 SVLVFDLSMKITDSEPSSDELFQNTISGVDDERMALRKVVETLEKARRDPRIVGIYLDST 110 Query: 75 SP---GGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 S G YA + I +A+++ + I + Y +S ++ IV ++ Sbjct: 111 SASQAGNVGYASLKEIRKALEEFRASGKKIVAYGSDWSEKEYYLSSVADSIVLNPLGMME 170 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHW 188 G+ Q ++ L K G+ ++ V+ K PF +++P+ + Q ++D + Sbjct: 171 VNGLSSQPMFLAGALQKYGIGVQVVRVGKFKGAVEPFILKKLSPENREQTQKLLDDVWGE 230 Query: 189 FVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + V SR I ++ ++D + + +AK GL+D V +EV L L Sbjct: 231 WRTTVGASRKIEPNQLQAIADSQAVLEATQAKTSGLVDRVAYPDEVVSDLKKLTNSDKDD 290 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 K NY K+L + ++ I ++ Sbjct: 291 KTFRQINLNNYAEVSGKSLGVERSSKNQIAVV 322 >gi|262375594|ref|ZP_06068827.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] gi|262309848|gb|EEY90978.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] Length = 340 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 134/294 (45%), Gaps = 16/294 (5%) Query: 5 LKKIKTRYVMLSLVTLT-VVYFSWSSHVEDNSPHVARIAIRGQIE------DSQELIERI 57 K + Y+++ ++ L S H+A + I G I +S I+ + Sbjct: 50 FKFLTFAYLLVVILALGKSCSSVSSDASAAAGSHIAVVDIVGTIAADKQSVNSSNTIKSL 109 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLI 114 ++ + + A++++++SPGGS + I++ IQ +K + K + + + AS Y I Sbjct: 110 KKAFENKQSKAVVLNINSPGGSPVQSDEIWQEIQYLKKQYPGKKLYAVIGDTGASGAYYI 169 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I+ +SLVGSIGV+ V L KLGV +++ S KA S V+P Sbjct: 170 ASAADEIIVNPSSLVGSIGVIMPNYGVTNLLQKLGVEDRTMTSGENKALLSMTQPVDPAQ 229 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +Q V+D+ + F+ V + R + G WTG +A K+G+ D +G + Sbjct: 230 KAHVQGVLDNVHGHFINAVKQGRGAKLKSNDPAIFSGLFWTGDQAVKLGIADRIGSLNTL 289 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + L ++++ +++P ++ I+S + + T +Q Sbjct: 290 KREL---KTEKALNYTIEYSPFESVLGRMGSSIGDGIASSVAQKLQSENSTTLQ 340 >gi|78185347|ref|YP_377782.1| peptidase S49, SppA [Synechococcus sp. CC9902] gi|78169641|gb|ABB26738.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Synechococcus sp. CC9902] Length = 270 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 6/261 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI + G I + Q +++ + + R AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARIVVEGPINGATRQRVLKALLEVKR-REFPALLLRIDSPGGTVGDSQEIHAALLRLR 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V+ ++AS G I + IV+ ++ GSIGV+ + + +++G+ Sbjct: 71 EKGCRVVASFGNISASGGVYIGVGAEKIVSNPGTITGSIGVILRGNDLSRVFERIGIRFD 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP +NP+ ++Q ++DSSY FV +V++ RN+ + +DGR++ Sbjct: 131 TVKSGKFKDILSPDRALNPEERALLQGLIDSSYSQFVGVVAKGRNLTEETVKTFADGRVF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 +G +A +GL+D +G ++ + L +DQ + P+ L + S L Sbjct: 191 SGEQALSLGLVDELGDEDHALRLAAQLADLDQDDIRPITLGKPRRKVSNLLPGSQLFSQL 250 Query: 273 EDTIPLMKQTKVQGLWAVWNP 293 + + + Q LW ++ P Sbjct: 251 QQWLTMELMGSGQVLW-LYRP 270 >gi|320449714|ref|YP_004201810.1| signal peptide peptidase SppA [Thermus scotoductus SA-01] gi|320149883|gb|ADW21261.1| signal peptide peptidase SppA [Thermus scotoductus SA-01] Length = 310 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 5/256 (1%) Query: 35 SPHVARIAIRGQI---EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 V + + G I +D ++L+ +I + D A ++ + SPGGS EAI RA++ Sbjct: 44 GEKVVLLEVVGSIPMGKDLEDLLSKIRQAREDQDIRAAVLFVDSPGGSVTETEAIHRALK 103 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + KP++ +AAS GY ++ A+ I T++ GSIGV+ P V+ L KLGV Sbjct: 104 DLAREKPLVAAFGTVAASGGYYVATAAREIFTPATAVTGSIGVIATLPQVQGLLAKLGVQ 163 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 ++ +K +K S + P+ ++Q + +Y FV V+E R++P DK L+DGR Sbjct: 164 VEVLKEGRLKDMGSGLRPLTPEERTLIQGYMREAYELFVARVAEGRHLPKDKVRQLADGR 223 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN--LSIS 269 I++G +A +GL D G E+ + L + R ++ P + L +S Sbjct: 224 IYSGTQAIALGLADREGYLEDAAKRAAELAGLEEFRLVRYEKPKGLLEGLLGEGFPLGLS 283 Query: 270 SLLEDTIPLMKQTKVQ 285 S E + L+ Q + + Sbjct: 284 SETEQLVSLLGQNRFR 299 >gi|257887182|ref|ZP_05666835.1| protease/peptidase [Enterococcus faecium 1,141,733] gi|257823236|gb|EEV50168.1| protease/peptidase [Enterococcus faecium 1,141,733] Length = 341 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++ + G I + + +E+++ + D + + + ++SPGG Sbjct: 55 GDSTQKIVKLTVDGTIAAGGSSGLFASEGYNHENFMEQLKAVEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FVR+VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEEAVLQAYIDSAYQRFVRIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN + ++DGRI+ G +AK+VGL+D +G E+ Q++ + ++ +P Sbjct: 235 RNKSEEAVKKIADGRIYDGVQAKEVGLVDELGFPEDALQAMRKEQKLEDAELVEYSSPSS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|163311063|pdb|3BF0|A Chain A, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals gi|163311064|pdb|3BF0|B Chain B, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals gi|163311065|pdb|3BF0|C Chain C, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals gi|163311066|pdb|3BF0|D Chain D, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Native Crystals Length = 593 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 285 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 344 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 345 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 404 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 405 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 463 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 464 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 522 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 523 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 559 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 92/218 (42%), Gaps = 17/218 (7%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T +++ L + GG + + I +A+++ ++ KPV + Sbjct: 74 DIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYS-Q 132 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 133 GQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIR 192 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A + + + ++ V+ +R IP ++ + G + T A Sbjct: 193 DDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYAL 252 Query: 220 KVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 + L+D + E+ ++L D++ R I ++ Sbjct: 253 ENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 290 >gi|253688357|ref|YP_003017547.1| signal peptide peptidase SppA, 67K type [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754935|gb|ACT13011.1| signal peptide peptidase SppA, 67K type [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 616 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 12/265 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMALRLAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFEN 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPLAD-LSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYWFCD 262 ++ G +W G++AK+ GL+D +G ++ + L + P + Sbjct: 501 IDQIAQGHVWVGSDAKENGLVDQIGDFDDAVKKAAELAKLGQYQLNWYAEQPGLLDTMLN 560 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGL 287 N S+ +LL + M V L Sbjct: 561 QVNASVYALLPVAVQSMLPAPVAQL 585 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 103/281 (36%), Gaps = 46/281 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ +Y + E + + + G + D Sbjct: 19 LNFIREFILNIFLIALILVGVGIYSQVKTTPEAATKGALLVDLTGVVVDQPTVNNKLRQL 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + DD+ T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGASNNRRQENSLFDIVDSIRQAKSDDNITGMVLDLSDFTGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 ++ KP+ S Y ++ +N + GS+ G Y K LDKL Sbjct: 139 FRDSGKPIYAVGDSYNQS-QYYLASFANTVSLTPQ---GSVDLHGFATNNLYFKSMLDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 V+ + K+ P+ +++P A +++ + ++ VS +R I + Sbjct: 195 KVTTNIFRVGTYKSAVEPYLRDDMSPAARDADGRWINALWQQYLNTVSANRQITPQQLFP 254 Query: 207 LSDGRIW--------TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G I T A L+D V + QSL Sbjct: 255 GAAGIIAGLQSVQGDTARYALDNKLVDEVASRSMTEQSLVK 295 >gi|229543532|ref|ZP_04432592.1| signal peptide peptidase SppA, 36K type [Bacillus coagulans 36D1] gi|229327952|gb|EEN93627.1| signal peptide peptidase SppA, 36K type [Bacillus coagulans 36D1] Length = 338 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 19/281 (6%) Query: 30 HVEDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSS 75 + S + + + G I+D+ Q +E +++ +D +I+ ++S Sbjct: 54 QDGNESKKIVVLNVNGTIQDTGTTPSLLDTGEYNHQSFLEELDQAKKDSDVKGIILHINS 113 Query: 76 PGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG I + ++K +K + + AS Y IS +N I A+ +L GS+G Sbjct: 114 PGGGVAESAEIHHHLMEIKKDTKKKIYVSMGPTCASGAYYISTPANKIFASPETLTGSLG 173 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ + K G+ +KS K SP+ ++ +M+Q +V++SY+ FV+++ Sbjct: 174 VIMESVNYGKLAKKYGIDFPVIKSGEYKDIMSPYRDMTKSEKEMLQKMVNNSYNGFVKVI 233 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA---LGVDQSIRKIK 250 SE R+IP ++ ++DGR++ G +A + LID G ++ ++ LG Q + Sbjct: 234 SEGRHIPKEQVRKIADGRVYDGKQALDLHLIDKYGYLDDTIAAMKKDLHLGKAQVVEYES 293 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + K L + L+ Q+ L ++ Sbjct: 294 SGGLDSLFSASAQKMLGKEAEASGLARLLSQSNAPRLMYLY 334 >gi|154250604|ref|YP_001411428.1| signal peptide peptidase SppA, 36K type [Parvibaculum lavamentivorans DS-1] gi|154154554|gb|ABS61771.1| signal peptide peptidase SppA, 36K type [Parvibaculum lavamentivorans DS-1] Length = 314 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 157/267 (58%), Gaps = 12/267 (4%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 H+AR+ I G I + E ++++ D S +I+S+ SPGG+ EA++ A++++ + Sbjct: 48 HIARVTIDGVIVHDRYQNEMFKKLAEDSSVRGVILSIDSPGGTTTGAEALYEAVRELAEK 107 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPV+ + +AAS GY+ + +++ IV+ ++ GSIGV+FQ+ ++ L +GV ++ VK Sbjct: 108 KPVVAVLGTVAASGGYIAALSADHIVSRGNTITGSIGVVFQWAQLEKLLGNIGVEVREVK 167 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 SSP+KAEPSPF NP+A+++ ++++DSSY WF+RLV+ R + ++ DGR++TG Sbjct: 168 SSPLKAEPSPFHTTNPEALKVTRELIDSSYDWFLRLVTIRRGLDEATARMVGDGRVYTGW 227 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 +A + GL+D +GG++E L + ++D P Y + + + +L E + Sbjct: 228 QAVENGLVDELGGEDEAIAWLAKEHKIDASLPVRDRTP--AYPDLGMASFTGKALGEAAV 285 Query: 277 PLM----------KQTKVQGLWAVWNP 293 + K+ + GL +VW P Sbjct: 286 TAIDGLTGKTQQTKRLTLDGLTSVWQP 312 >gi|317970537|ref|ZP_07971927.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CB0205] Length = 270 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 136/260 (52%), Gaps = 5/260 (1%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARIAI G I + +++ + + + AL++ + SPGG+ + I A+ Sbjct: 8 KSRRKLARIAIEGPIASGTRKRVLKALREVEK-REFPALLLRIDSPGGTVGDSQEIHAAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ ++ VI ++AS G I A++ IVA S+ GSIGV+ + + L+++G Sbjct: 67 LRLREKQCKVIASFGNISASGGVYIGVAADKIVANPGSITGSIGVILRGNNLSRLLERIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ Q++Q+++DSSY FV V+E R + D+ +D Sbjct: 127 IQFETVKSGIYKDILSPDRALSSGERQVLQELIDSSYGQFVSAVAEGRGLSEDEVRRFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GR+++GA+A+++GL+D +G +E+ + L +D K + K + + S Sbjct: 187 GRVFSGAQAQELGLVDALGDEEQARRLACELAELDLEKTKPITFGQEKKRFAGVIPGRSQ 246 Query: 269 SSLLEDTIPLMKQTKVQGLW 288 SL + L + Q LW Sbjct: 247 ISLALQWLKLELSSSGQPLW 266 >gi|261209833|ref|ZP_05924135.1| protease IV [Vibrio sp. RC341] gi|260841131|gb|EEX67651.1| protease IV [Vibrio sp. RC341] Length = 616 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 14/279 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 S S N+ +A + G I D + + D + A+++ + SP Sbjct: 315 SISPTTLPNASDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSP 374 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 375 GGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIF 434 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L+ LG+ V ++P + + + A +Q ++ Y F+ LV+E Sbjct: 435 SVITTFEKGLNNLGIYTDGVGTTPFSGQG-VTTGLTQGAKDAIQLGIEHGYQRFISLVAE 493 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWN 253 R + ++ GR+WT +A+ +GL+D +G ++ L +++ Sbjct: 494 KRGMTLKAVDDIAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAATLAQLDQYNLYWVEEPL 553 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 P + DL SL D L+ + +Q L W Sbjct: 554 TPAQQFLQDLLGQVHVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 119/325 (36%), Gaps = 42/325 (12%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYIHADAPLPTINKSSALVLNLSGPIVEQSTHINPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWNPPKNYWFC 261 + + G A KKVGL+D + +++V Q+L + S + + + Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAETFGSDGKDSYNAVSYYEYKASISPT 319 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQG 286 L N S +++ + +M ++ +G Sbjct: 320 TLPNASDIAVVVASGAIMDGSQPRG 344 >gi|307261744|ref|ZP_07543410.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868562|gb|EFN00373.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 618 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQIED---------SQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEINEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++ +R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAHNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|299133338|ref|ZP_07026533.1| signal peptide peptidase SppA, 36K type [Afipia sp. 1NLS2] gi|298593475|gb|EFI53675.1| signal peptide peptidase SppA, 36K type [Afipia sp. 1NLS2] Length = 326 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 86/296 (29%), Positives = 156/296 (52%), Gaps = 15/296 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIV 71 V+L++V ++ +AR+ I G I + E + +ER+ + D+A A+IV Sbjct: 28 LVILAVVGGGMLLTPAGRQALTGKSAIARVKIEGLIRSNDERVAALERLEKSDAA-AVIV 86 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGG+ E +F A+ ++K +KP++ + + AS Y+ + AS+ I+A +TSLVGS Sbjct: 87 HINSPGGTTAGSEQLFDALTRLKAKKPLVVVIEGLGASGAYITALASDHIIAQQTSLVGS 146 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGVLFQ+P L +GV ++ VKS+P+KA P+ + +P+A + +V S+ WF Sbjct: 147 IGVLFQFPNFTDLLKTVGVKVEEVKSAPLKAAPNGYEPTSPEARAALDALVKDSFAWFKD 206 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 LV R++ +SDGR++TG +A + L+D +G ++ + L A + ++D Sbjct: 207 LVKTRRHMDDATLQTVSDGRVFTGRQAMGLKLVDELGDEKTAVKWLQAQNKIKGDLPVRD 266 Query: 252 WNPPKNYWFCDLKNLSISSLLED--------------TIPLMKQTKVQGLWAVWNP 293 + + + ++ LE L +Q +++G+ A+W P Sbjct: 267 YKLSPRFSDMTFLRAAAATTLESLGLPTVARFVGGNGAASLSEQLQLEGMLALWRP 322 >gi|157146039|ref|YP_001453358.1| protease 4 [Citrobacter koseri ATCC BAA-895] gi|157083244|gb|ABV12922.1| hypothetical protein CKO_01793 [Citrobacter koseri ATCC BAA-895] Length = 618 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D + + G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGDGIGVVFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + K KPV+ + MAAS GY IS ++ IVA ++L Sbjct: 370 LRVNSPGGSVSASEVIRAELAAAKAAGKPVVVSMGGMAASGGYWISTPASYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDSIGVHTDGVATSPLADV-SVTKSLPPEVQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R + ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARKSTPAQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAIAKAAELAKLKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + ++S S ++L + I M + Sbjct: 548 EYYQDEPTFFDRIMDSMSGSVRAMLPEAIQAMLPAPL 584 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 104/284 (36%), Gaps = 50/284 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ S + S AR + I G I D Sbjct: 19 LNFVRELVLNLFFIFLVLVGVGIWMQLSD--GNTSQQTARGALLLDISGVIVDKPSSTNR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFR 88 +++ I + D + T +++ L + G+ + I + Sbjct: 77 LGVIGRQLFGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGADQPSMQYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV V + + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFA-VGDSYSQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 L VS + K+ PF +++P A + + + ++ V+ +R IP + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVF 255 Query: 206 VLS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + DG T A L+D + EV ++L Sbjct: 256 PGAQAMLDGLSKVDGD--TAKYALDNKLVDALASNAEVEKALTK 297 >gi|157803726|ref|YP_001492275.1| cytidylate kinase [Rickettsia canadensis str. McKiel] gi|157784989|gb|ABV73490.1| cytidylate kinase [Rickettsia canadensis str. McKiel] Length = 305 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 139/262 (53%), Gaps = 4/262 (1%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + N ++A I I I + ++ +++++I D ALIV+++SPGG+ E I+ + Sbjct: 48 ITGNEDYIASILIDEIIFEDEKRDKKLKKIIDDSHIKALIVNVNSPGGTVVGSEKIYNIL 107 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K+ +KPV+ + MA S GYLIS + I++ ++ GSIGV+ Q + KLG+ Sbjct: 108 RKISEKKPVVIVMGTMATSGGYLISLGGDYIISHNGTITGSIGVILQTAEITELAQKLGI 167 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + KS +KA P+P ++ + + ++ +Y +F+ LVSE RN+P ++ L+DG Sbjct: 168 KFNNFKSGELKAAPNPTEKLTQAVRIAIMENIEDTYDFFLELVSERRNLPIEEVKKLADG 227 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R+++G +A K+ L+D +G ++ + L + + +KD+ ++ S Sbjct: 228 RVYSGRQALKLKLVDSIGSEDTALKWLQEVKKINTNLLVKDYPLKAKPKLVEMIFEDFGS 287 Query: 271 LLEDTIPLMKQTKVQGLWAVWN 292 + P + + G+ A++ Sbjct: 288 IT----PNFFKNNLNGIKAIFQ 305 >gi|319788342|ref|YP_004147817.1| signal peptide peptidase SppA, 67K type [Pseudoxanthomonas suwonensis 11-1] gi|317466854|gb|ADV28586.1| signal peptide peptidase SppA, 67K type [Pseudoxanthomonas suwonensis 11-1] Length = 635 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 10/254 (3%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 D P VA + G+I + + + D+ A+++ + SPGG +A Sbjct: 335 DKRPQVAVVVAEGEITGGDQPAGTIGGESTSALLRQAREDEDIKAVVLRVDSPGGEVFAS 394 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 395 EQIRREVALLKAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGLVPNFT 454 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P+ +++Q V++ Y F+ V+++R + Sbjct: 455 RTLDKIGVHTDGVGTTRYAGAFDVTRPLDPEVGRVIQSVINKGYADFIGKVADARERSVE 514 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+GA+A GL+D +GG + + + + + F Sbjct: 515 DIDQVARGRVWSGAQALDRGLVDAMGGLADAIADAASRVDLEEGKYRVRYVEKDPSPFAQ 574 Query: 263 LKNLSISSLLEDTI 276 S + T+ Sbjct: 575 FLAGMAGSRVAATL 588 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 87/221 (39%), Gaps = 32/221 (14%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG---SAYAG-EAIFRAIQKVKNR-KPVITEVHE 105 ++L+ IE D + +++ L G S YA + A+ ++ K V+ Sbjct: 102 RDLLRAIEAAREDKNIERVLLRLD---GLQPSGYASLRELAAALGTLRASGKQVVAFSEN 158 Query: 106 MAASAGYLISCASNIIVAAETSLVGS-----IGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + S YL++ ++ + GS IG QY + +KLGV + + Sbjct: 159 LGQS-QYLLAAQADEVYLDPM---GSLLLQGIGRYRQYF-RQGLQEKLGVDVHLFRVGEY 213 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL----------VLS 208 K+ P+ + ++ + ++ ++ ++ V+++R + + + Sbjct: 214 KSAAEPYILDAASAESKEADLYWMNDIWNRYLDDVAKARKLDKAELAAQIDQLAAGIEAA 273 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 G I A+++ L+D + +EEV L GV + Sbjct: 274 GGDI--ARHAEQLKLVDGLKTREEVRDLLVERGVADEDDDL 312 >gi|165976686|ref|YP_001652279.1| protease IV, signal peptide peptidase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876787|gb|ABY69835.1| protease IV, signal peptide peptidase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 618 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQIED---------SQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEINEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|186684393|ref|YP_001867589.1| signal peptide peptidase SppA, 36K type [Nostoc punctiforme PCC 73102] gi|186466845|gb|ACC82646.1| signal peptide peptidase SppA, 36K type [Nostoc punctiforme PCC 73102] Length = 273 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 135/266 (50%), Gaps = 9/266 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I + + ++E ++ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGAIAGATRKRVLEALKTVEE-KKFPALLLRIDSPGGTVGDSQEIYSALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + IV+ ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LREKIKIVASFGNISASGGVYIGMGAEHIVSNPGTITGSIGVILRGNNLERLLEKIGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + +KS P K S ++ ++Q+++D+SY FV+ V++ R++ + +DGRI Sbjct: 129 QVIKSGPYKDILSFDRQLTQPEENILQELIDTSYQQFVQTVADGRSLTVEAVKSFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNL-SISS 270 +TG +A ++G++D +G +E+ + L G+D K L +SS Sbjct: 189 FTGQQALELGVVDRLGTEEDARRWTAELVGLDPEKTLCYTLEERKPLLSRLLPGSRQVSS 248 Query: 271 LLEDTIPLMK---QTKVQGLWAVWNP 293 + I ++ T LW ++ P Sbjct: 249 GIRSGIDWLEFEMSTSGLPLW-LYRP 273 >gi|147868|gb|AAA24648.1| protease IV [Escherichia coli] Length = 618 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A MMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 109/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP ++ + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|298293883|ref|YP_003695822.1| signal peptide peptidase SppA, 36K type [Starkeya novella DSM 506] gi|296930394|gb|ADH91203.1| signal peptide peptidase SppA, 36K type [Starkeya novella DSM 506] Length = 324 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 22/289 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 +++ + +SPHVAR+AI G I + +E +E +E I + A A+I+S+ SPGG+ Sbjct: 39 AFAWWNDGGLLPRSSPHVARVAIGGLIRNERERLEMLEDIGK-SGAKAVILSIDSPGGTV 97 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A++ ++++ +KP++ V +AAS Y+ + ++ IVA +LVGSIGV+FQ+P Sbjct: 98 VGSAALYDGLRRLAEKKPIVAVVDGIAASGAYIAALGADHIVAPRNALVGSIGVIFQFPN 157 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + +GV+ + +KS+P+KA P+ F + +A ++ +V+ SY WF LVSE R + Sbjct: 158 FAELMKSVGVAYEEIKSTPLKAAPNMFDPPSEEARAAVRSLVEDSYDWFKGLVSERRLLD 217 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK---- 256 DK SDGR++TG +A + LID +G + L ++DW+ + Sbjct: 218 GDKLASASDGRVFTGHQALPLRLIDEIGDERTARDWLARERGVSKDLPVRDWHTKRVGDE 277 Query: 257 -------------NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 DL NL+I + + L Q ++ GL A+W Sbjct: 278 FGWLRGTSVRLMSLIGLGDLANLTIGAASD----LAMQARLDGLLALWQ 322 >gi|114332358|ref|YP_748580.1| peptidase S49 [Nitrosomonas eutropha C91] gi|114309372|gb|ABI60615.1| peptidase S49 [Nitrosomonas eutropha C91] Length = 317 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 116/242 (47%), Gaps = 9/242 (3%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + ++ T + +L+ + + + H A + +RG+I ++ + ++ Sbjct: 36 IFFRLLTFSYLFTLLFWGLGWLD-TEATGGFGKHTALVDLRGEITADGLNSAENINTGLK 94 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D + A+I+ ++SPGGS +I I +++ + P + V ++ AS GY I+ Sbjct: 95 KAFEDKNTAAVILRINSPGGSPVQAGSINDEIHRLRTQHPDIPLYAVVEDICASGGYYIA 154 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL L+KLG+ + + + K PFS +P Sbjct: 155 VAADKIFVDKASIVGSIGVLMDGFGFTGTLEKLGIERRLLTAGENKGFLDPFSPSDPGQR 214 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + ++ + F+++V + R + G +WTGA + ++GL D +G + V + Sbjct: 215 EHAKKMLVEIHQQFIQVVQDGRGDRLKDNPEIFSGMVWTGARSIELGLADALGSMDYVAR 274 Query: 236 SL 237 + Sbjct: 275 EV 276 >gi|163757833|ref|ZP_02164922.1| proteinase IV protein [Hoeflea phototrophica DFL-43] gi|162285335|gb|EDQ35617.1| proteinase IV protein [Hoeflea phototrophica DFL-43] Length = 322 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 108/271 (39%), Positives = 165/271 (60%), Gaps = 10/271 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + S H+ARI I G I D ++LI+ IE + ++A AL+V +SSPGG+ Y GE I++A+ Sbjct: 43 DTGSDHIARIDISGVISDDEDLIDLIEDAASSETAKALVVRISSPGGTTYGGERIYKALL 102 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + KPV+ +V +AASAGY+I+ +S+ IVA E+S+VGSIGV+FQY + L+K+G+ Sbjct: 103 EAGKSKPVVADVRTLAASAGYMIAASSDHIVAGESSIVGSIGVIFQYAQAQELLNKIGLR 162 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 I+ +KS+P+KAEPSPF + + +A M++ +V SY WFV LV+E R + L L+DG Sbjct: 163 IEEIKSAPLKAEPSPFHDTSEEAKAMIRAMVLDSYDWFVDLVTERRGMTRADVLALADGS 222 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI---KDWNPPKNYWFCDLKNLSI 268 I+TG +A GL+D +GG+ E+ L + V+ + I K +P + +L Sbjct: 223 IFTGRQALGNGLVDAIGGEAEIRAYLESRDVEADLEIIEWEKQSDPARRLIGAQAVDLIA 282 Query: 269 SSL-----LEDTIPLMKQTK--VQGLWAVWN 292 S L D I + K + GL +VW Sbjct: 283 SYFGVPMRLSDEIDRLSGGKLFLDGLVSVWQ 313 >gi|138896331|ref|YP_001126784.1| Signal peptide peptidase [Geobacillus thermodenitrificans NG80-2] gi|134267844|gb|ABO68039.1| Signal peptide peptidase [Geobacillus thermodenitrificans NG80-2] Length = 341 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 137/293 (46%), Gaps = 21/293 (7%) Query: 20 LTVVYFSWSSHV-EDNSP--HVARIAIRGQIEDS--------------QELIERIERISR 62 L+++ S+S V ED P + + + G IED+ Q ++ I+++ Sbjct: 47 LSLMEDSFSEEVIEDGDPLKKIVVLEVNGVIEDTGEAETFFSSSFYNHQAFLKMIKQVKE 106 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNI 120 DDS A+++ ++SPGG + + K+K P+ + MAAS GY I+ A + Sbjct: 107 DDSVKAIVLRINSPGGGVVESAEVHNQLLKLKKETKKPIYVSMGAMAASGGYYIATAGDK 166 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A+ ++ GSIGV+ Q + K GV + ++KS P K +P ++ +++Q Sbjct: 167 LFASPETITGSIGVIMQSINYEGLAKKYGVELVTIKSGPYKDIMNPARKMTDAEQEILQR 226 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ SY FV ++ E R + + L+DGRI+ G +AK + LID G ++ +L Sbjct: 227 LINQSYEGFVDVIVEGRKLSEEAVRKLADGRIYNGRQAKALQLIDEFGYLDDTIAALKKE 286 Query: 241 GVDQSIRKIKDW--NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + +K P + + N + + I L+ + L ++ Sbjct: 287 HRLSGAQVVKYVSDTPWSSLFGVISNNAKPETEASELIRLLSRPSSPRLMYLF 339 >gi|91204301|emb|CAJ71954.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 362 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 136/300 (45%), Gaps = 34/300 (11%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVE----------------DNSPHVARIAIRGQIE 48 L + S + L S + +A I+++G + Sbjct: 34 LATFFFLCTLFSFLLLIGSLMMGKSIIAGGAMDKKYVTEEIVEGSGENKIAVISVKGILT 93 Query: 49 DS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + + + E++E + D A+++ + SPGG A + ++ I K K Sbjct: 94 NETTGNLFIEKPSIVEIVKEQLEHAANDVQVKAVLLEIESPGGGITASDIMYHQIIKFKK 153 Query: 96 --RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +K ++ + ++AAS GY I+ A++ IVA T++ GSIGV+ + F+++ GV Sbjct: 154 NTQKKIVVYMEDIAASGGYYIASAADFIVAHPTTITGSIGVIMPLINISEFINRHGVVDN 213 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 S+ S MK SP ++ + +++Q++++ Y FV +VS RN+ ++ ++DGRI+ Sbjct: 214 SIASGDMKEIGSPLKQMTEEETEILQNIINEMYMQFVEVVSIGRNLDVEEVKKIADGRIY 273 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 TG +A + GL+D +G E+ ++ + Y F +L L + L + Sbjct: 274 TGKQALEAGLVDKIGYLEDAIGMAKKASGIDEATIVRY---KRLYGFAELFGLLCTKLSQ 330 >gi|157828572|ref|YP_001494814.1| protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933286|ref|YP_001650075.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] gi|2944013|gb|AAC05202.1| putative protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|2970341|gb|AAC05973.1| putative protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801053|gb|ABV76306.1| protease IV [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908373|gb|ABY72669.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] Length = 304 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 154/297 (51%), Gaps = 15/297 (5%) Query: 6 KKIKTRYV---MLSLVTLTVVYFSWSSH--------VEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R + + +++ + +V+ + N ++A + I I + ++ Sbjct: 12 RQIKSRLLIWKLAAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRD 71 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + MAAS GYLI Sbjct: 72 KKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNILRKISAKKPVVIVMGTMAASGGYLI 131 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + I++ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 132 SLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + D ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 192 RVAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTAL 251 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + +KD+ D+ I + P + G+ A++ Sbjct: 252 KWLQEVQKINVNLLVKDYQLKPKPTLMDI----ILEDFDSIAPSFFKNSFNGIKAIF 304 >gi|307720629|ref|YP_003891769.1| signal peptide peptidase SppA, 36K type [Sulfurimonas autotrophica DSM 16294] gi|306978722|gb|ADN08757.1| signal peptide peptidase SppA, 36K type [Sulfurimonas autotrophica DSM 16294] Length = 289 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 127/237 (53%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 + I+ + + V + ++ F+ +S E + ++ +I + G I D+ E++E+I + + + Sbjct: 14 TMNYIQNHFKAMVFVLILILIFAPASKKEFTNYNLQKINLSGPIVDATEIVEKINKAANN 73 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 ++ +++S++SPGG+ I AI+++K +KPV+ AS Y S ++ I+A Sbjct: 74 NAIKGVLLSVNSPGGAVSPSIEIAYAIKRLKIKKPVVAYAKGTMASGSYYASIWADKIIA 133 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S++GSIGV+ Q + ++K+G+ + VK+ K +P V + V+ Sbjct: 134 NPGSMIGSIGVIMQGADLSGLMNKIGIKSQVVKAGLYKQIGTPDRPWKKYEVAELNKVIK 193 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +Y F + V+++R + + K ++ I+T A+AKKVGL+D +G + L L Sbjct: 194 GTYDMFTKDVADARKLDFKKRDTYANAHIFTAAQAKKVGLVDQLGVEYNAKNELEKL 250 >gi|32034999|ref|ZP_00135077.1| COG0616: Periplasmic serine proteases (ClpP class) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208734|ref|YP_001053959.1| protease 4 [Actinobacillus pleuropneumoniae L20] gi|126097526|gb|ABN74354.1| protease 4 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 618 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQIED---------SQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLQKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEINEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|227551682|ref|ZP_03981731.1| S49 family peptidase [Enterococcus faecium TX1330] gi|257884398|ref|ZP_05664051.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|257895718|ref|ZP_05675371.1| protease/peptidase [Enterococcus faecium Com12] gi|293377673|ref|ZP_06623862.1| signal peptide peptidase SppA, 36K type [Enterococcus faecium PC4.1] gi|293571866|ref|ZP_06682882.1| protease/peptidase protein [Enterococcus faecium E980] gi|227179123|gb|EEI60095.1| S49 family peptidase [Enterococcus faecium TX1330] gi|257820236|gb|EEV47384.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|257832283|gb|EEV58704.1| protease/peptidase [Enterococcus faecium Com12] gi|291608120|gb|EFF37426.1| protease/peptidase protein [Enterococcus faecium E980] gi|292643673|gb|EFF61794.1| signal peptide peptidase SppA, 36K type [Enterococcus faecium PC4.1] Length = 341 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++ + G I + + +E+++ + D + + + ++SPGG Sbjct: 55 GDSTQKIVKLTVDGTIAAGGSSGLFASEGYNHENFMEQLKAVEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FVR+VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPKTKEEEAVLQAYIDSAYQRFVRIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN + ++DGRI+ G +AK+VGL+D +G E+ Q++ + ++ +P Sbjct: 235 RNKSEEAVKKIADGRIYDGVQAKEVGLVDELGFPEDALQAMRKEQKLEDAELVEYSSPSS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|288957927|ref|YP_003448268.1| protease IV [Azospirillum sp. B510] gi|288910235|dbj|BAI71724.1| protease IV [Azospirillum sp. B510] Length = 585 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 21/288 (7%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATAL 69 Y + + + N P +A I G I S +++ IE + D A+ Sbjct: 278 YLAVAGNPNGNGPTIALINAVGTITGGESGKPATGGLSAGSDTIVQAIEEAADDPDVRAI 337 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 + + S GG+ A EAI RA+ + + KPVI + + AAS GY I+ A++ IVA+ +L Sbjct: 338 LFRIDSGGGAVSASEAIRRALVRARQSGKPVIASMGDAAASGGYWIALAADRIVASPATL 397 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+ + DKLGV V+S+ SP + + ++D +Y Sbjct: 398 TGSIGVVAGKFAIGGLSDKLGVHWDGVRSARNAGMWSPLRPFGDSESERLTAIIDDTYAN 457 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQS 245 F++ V+E+R + D+ ++ GR+WTGA+A+ +GLID +GGQE+ ++ L D Sbjct: 458 FLQRVAEARRMTPDQARGIAKGRVWTGAQARDLGLIDDLGGQEQALILARTAAGLAPDAP 517 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + + PPK+ L L+ L L +++ L A P Sbjct: 518 VT-LAPYPPPKSVTDELLDLLAGKGNLVGA--LATAAELRPLLAELRP 562 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 94/268 (35%), Gaps = 28/268 (10%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ--------- 51 + F ++ ++L +TVV + V + + G + +S Sbjct: 4 VRFFVRLFALIGLLLVGGAVTVVVLAVRHEPALPDAVVLELDLTGPLAESDGGRIDSLFE 63 Query: 52 ------ELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPV-IT 101 ++++ ++ RD ++ G A + + AI++ ++ + Sbjct: 64 QRTTLRQVLDALDAGRRDPRVKGVLARF---GDDAVGFAQTQELRGAIERFRSSGRFAVA 120 Query: 102 EVHEMAASA----GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 E + YL++ A + + +G G+ + P+ + LD+LGV + Sbjct: 121 FAEEYGGAGPGNRAYLLASAFDEVWLQPMGTLGITGLSMELPFAREALDRLGVQPSFAQR 180 Query: 158 SPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ F+ + P +MM+ +V + V +++SR + D Sbjct: 181 EEYKSFAETFTTAGMTPANREMMEGLVADLSNQLVDGIAKSRRLAPATVRAAMDKAPLLS 240 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVD 243 EA +D +G +E D Sbjct: 241 REALDQKFVDKLGYADEARDEALKRAGD 268 >gi|73541958|ref|YP_296478.1| peptidase S49 [Ralstonia eutropha JMP134] gi|72119371|gb|AAZ61634.1| Peptidase S49 [Ralstonia eutropha JMP134] Length = 394 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 16/291 (5%) Query: 7 KIKTRYVMLS--LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R+ +L LV V+ + H A +++ G+I ++ + ++ Sbjct: 109 RIFFRFAVLGILLVVFFAVFDFKGDSGIGSGRHTAMVSLDGEIAAGTPASAESINASLQA 168 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISC 116 D +A +I+ ++SPGGS I I +++ KP V E+ AS GY ++ Sbjct: 169 AFADSNAAGVILKINSPGGSPVQAGIINDEIHRLRTLYPSKPFYVVVEEICASGGYYVAA 228 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLGV + S K PFS P+ Sbjct: 229 AADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLYTSGANKGMLDPFSPQVPRQKA 288 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + ++ + F+ +V E R L G W+G + ++GL D +G + V + Sbjct: 289 YAETMLKEIHQQFIDVVKEGRGDRLKSDPELFSGLFWSGERSVELGLADGLGSADYVARD 348 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 L+ I D+ +N K + ++ T +QG+ Sbjct: 349 LF------KAEDIVDYTVKENIAERVAKRFGAAVGTAAMKTMLWSTGMQGM 393 >gi|170077749|ref|YP_001734387.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7002] gi|169885418|gb|ACA99131.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7002] Length = 594 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 12/271 (4%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + VA + G I + L ++ + +D +++ ++SPGGSA A Sbjct: 306 TSENTVAVVYAEGNIVGGEGTPDTIGGDSLSRQLRELRQDPEVKVVVLRINSPGGSAIAS 365 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R ++ ++ KPVI + ++AAS GY I+ S+ I A ++ GSIGV P ++ Sbjct: 366 EIILRELKLIREADKPVIVSMGDLAASGGYWIATESDRIFAQPNTITGSIGVFGILPNIQ 425 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G++ SV++ + + + + Q+ V+ Y F+ VS +R + Sbjct: 426 TIGNNNGLTWDSVQTGELANLGTASRPKTEAEMAIFQNFVNDIYGKFLDRVSAARGLTEA 485 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + ++ GR+W+G +A+ + L+D +GG ++++ P W + Sbjct: 486 EVRQIAQGRVWSGEDAQAIRLVDELGGLSAAIAYAVDTAELGEDFTVQEY-PRPQTWEEE 544 Query: 263 LKNLSISSLLEDTIPLMKQ-TKVQGLWAVWN 292 + + + +E + PL ++ ++Q +W Sbjct: 545 IFSNLFGAQIEASDPLSQEWLRLQASIKLWR 575 Score = 87.9 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIA-IRG---QIEDSQELIERIERISRDDSATALIV--SLS 74 +++ F+ + ++D P + I G + +++ E I + DD T L + + Sbjct: 50 SILIFNMGTIIQDRDPSSSIGNVIAGDFPETLSLRDVTESIRAAAEDDKITGLFLDGRQN 109 Query: 75 SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 S G A + +A+Q K K + EM Y +S ++ I +V G Sbjct: 110 SLNGYAT-LREVRQALQDFKAAGKKIYAYDVEMTERE-YYLSSLADEIWLNPLGVVEMNG 167 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVR 191 + + + K LD+ G+ ++ V+ K+ PF+ E +P+ Q + ++ + F Sbjct: 168 LGSEQLFFKGALDQYGIGVQVVRVGDYKSAVEPFTQEEFSPENRQQTEALLSDLWTDFKD 227 Query: 192 LVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 V+ R L+D + I A++ L+ + +E+ L + + + Sbjct: 228 TVAGDRPFAATLPQSLADTQGILLPEVAQQEQLVTRLAYFDEILAELKTFTGTELDKDLP 287 Query: 251 DWNPPKNYWFCDLKNLSISS 270 + DL + ++S Sbjct: 288 QMDLADYSLEQDLAQIGVTS 307 >gi|218297242|ref|ZP_03497898.1| signal peptide peptidase SppA, 36K type [Thermus aquaticus Y51MC23] gi|218242435|gb|EED08975.1| signal peptide peptidase SppA, 36K type [Thermus aquaticus Y51MC23] Length = 311 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 4/252 (1%) Query: 35 SPHVARIAIRGQIEDS---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 V + ++G I ++ + ++ + D A+++ + SPGG EAI RA++ Sbjct: 45 GEKVLLLELKGTIPTDKALEDFLSQVRQAKEDPGIKAVVLEVVSPGGGVTETEAIHRALK 104 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 ++ KP++ + +AAS GY + A+ I A T++ GSIG + ++ LDKLGV Sbjct: 105 ELAREKPLVASLGTVAASGGYYAATAAREIFTAPTTITGSIGAISIQSQIQGLLDKLGVE 164 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 ++ +K K S + P+ ++Q + +Y FV+ V+E R +P ++ L+DGR Sbjct: 165 VEVLKEGKFKDMASGLRPLTPEEKAVIQGYLREAYELFVKRVAEGRRMPPEEVYRLADGR 224 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 I++GA+A +GL D G E+ Q L R ++ + PK L + S Sbjct: 225 IYSGAQALALGLADREGYLEDAAQRAAELAGLTGFRLVR-YKKPKGLLAELLGDEPPFSF 283 Query: 272 LEDTIPLMKQTK 283 DT L++ Sbjct: 284 ASDTQALLQALA 295 >gi|148980157|ref|ZP_01815908.1| protease IV [Vibrionales bacterium SWAT-3] gi|145961375|gb|EDK26682.1| protease IV [Vibrionales bacterium SWAT-3] Length = 607 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 16/265 (6%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I G I D + + DD A+++ + SPGGSA+A E I Sbjct: 318 VAVIVASGAIMDGKQPRGTVGGDTTAALLRQARNDDKVKAVVLRVDSPGGSAFASEVIRN 377 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS ++ I+A T+L GSIG+ + L+ Sbjct: 378 EIEAIKQAGKPVVVSMSSLAASGGYWISMGADKILAQPTTLTGSIGIFSVITTFEKGLND 437 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV V +SP + + A Q ++ Y F+ LV E+R + D + Sbjct: 438 IGVYTDGVGTSPFSGLG-ITTGLTEGAKDAFQMGIEHGYRRFIGLVGENRGMDVDAVDKI 496 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY-----WFCD 262 + GR+WTG +A + GL+D +G ++ S +L +S P F + Sbjct: 497 AQGRVWTGQDAMQNGLVDEIGDFDDAIASAASLAELESYNIYWVEEPLSATEQFIQEFMN 556 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGL 287 +SI ++ IP Q Q L Sbjct: 557 QVQMSIGLDIQSMIPSSLQPVTQQL 581 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 101/282 (35%), Gaps = 55/282 (19%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 FV + +LS+ + VYF + A + + G I + Sbjct: 12 FVRVALVNLIFLLSIAVIYFVYFHSDTAPPTVPQQSALVLNLSGPIVEQSRYINPMDSVT 71 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E I DD+ T ++++L P + I +A+ + K Sbjct: 72 GSLLGKDLPKENILFDIVETIRYAKDDDNVTGIVLALKELPETNLTKLRYIAKALNEFKA 131 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KP+ S Y ++ + + + GVL + Y K L+KL Sbjct: 132 SGKPIYAVGDFYNQS-QYYLASYATKVYMSPDG-----GVLLKGYSAYSLYYKTLLEKLD 185 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP------- 200 V+ + K+ PF +++ A + + + +V VS +R I Sbjct: 186 VNTHVFRVGTYKSAIEPFIRDDMSDAAKESASRWLGQLWSAYVDDVSNNRQIDAKTLNPS 245 Query: 201 ----YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ + DG I A+K+GL+D + +++V L Sbjct: 246 MDTFLNELESV-DGDI--AKLAEKLGLVDELATRQQVRLELA 284 >gi|150401144|ref|YP_001324910.1| signal peptide peptidase SppA, 36K type [Methanococcus aeolicus Nankai-3] gi|150013847|gb|ABR56298.1| signal peptide peptidase SppA, 36K type [Methanococcus aeolicus Nankai-3] Length = 290 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 134/265 (50%), Gaps = 15/265 (5%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISR 62 + L + S ++ S V+ I + G+I + E I ++ Sbjct: 1 MAILFMPDGSGNNIFSFWSDEVSIIELTGEISSNGGDGGVFGGYSPSADEYIRLLDNAEN 60 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +D A+++ ++SPGG A E + R +++V +KPV+ + + AS Y+ + S+ IV Sbjct: 61 NDGVKAVVLKINSPGGEVVASEKLARKVKEVSEKKPVVAYIETIGASGAYMAAVPSDYIV 120 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A + S+VGSIGV+ + +K+G++ ++K+ K SP + + +M++ + Sbjct: 121 AEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKDIGSPNRPMTDEEKKMLESMT 180 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 D Y F++ V+E+R + +KT +++G+I+TG++AKK GL+D VG +++ L Sbjct: 181 DEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGVEQDAIDKASELAN 240 Query: 243 DQSIRKI-KDWNPPKNYWFCDLKNL 266 + + D N P + + ++ Sbjct: 241 ISNPTVVYYDANKPAGLFGLSINDI 265 >gi|93005622|ref|YP_580059.1| signal peptide peptidase SppA, 36K type [Psychrobacter cryohalolentis K5] gi|92393300|gb|ABE74575.1| signal peptide peptidase SppA, 36K type [Psychrobacter cryohalolentis K5] Length = 351 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 135/297 (45%), Gaps = 22/297 (7%) Query: 5 LKKIKTRYVMLSLVTL----TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIE 55 K + Y++L +T+ + + ++ + PH+A + ++G I ++ + Sbjct: 57 FKLLTFGYILLIFLTIGRSCSTEAPTGLDGIDTSKPHLAVVELQGTISSGDVANAYDVND 116 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGY 112 + R ++ ++ A+ + ++SPGGS + I++ + ++ K + + +M AS Y Sbjct: 117 ALTRAFKNSNSKAVALDINSPGGSPVQSDEIWQTMMDLRKEYPDKKLYAVIGDMGASGAY 176 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I +SLVGSIGV+ VK +DK+GV ++ + K S + Sbjct: 177 YIASAADEIYVNPSSLVGSIGVIMPSYNVKGLMDKVGVEDLTITAGEYKDILSLSRPLTD 236 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ V+D+++ F+ V E R + L G WTG ++ + GL D G Sbjct: 237 YEEKHVEKVLDNTHKHFINAVKEGRGDRLKNPEQNKLFSGLFWTGEQSIEFGLADKKGSI 296 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNY-WFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + + L + + ++ P + F D + + + + +I L + +G Sbjct: 297 SSLEKQL-------KLNNVVNYTPSDPFQLFMDRFAVKLGAGVGSSINLDLLPQEEG 346 >gi|120609865|ref|YP_969543.1| peptidase S49 [Acidovorax citrulli AAC00-1] gi|120588329|gb|ABM31769.1| peptidase S49 [Acidovorax citrulli AAC00-1] Length = 350 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 9/283 (3%) Query: 7 KIKTRY-VMLSLVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQE-----LIERIER 59 ++ TR ++ LV + V + + ++PH A + I+G+I E ++ + Sbjct: 68 RVFTRMAWLVFLVAVAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEFVVAAMRS 127 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCA 117 D + A+++ ++SPGGS I I ++K + KPV V E ASA Y I+ Sbjct: 128 AFEDSGSQAVVLLINSPGGSPVQAGIINDEILRLKAKYNKPVYAVVEETCASAAYYIAAG 187 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL ++KLGV + + + K PFS ++ K Sbjct: 188 ADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPMSEKQRTY 247 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+++V + R T G WTG +A +GL D +G + V + + Sbjct: 248 AQAMLDQIHQQFIQVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNLDYVAREV 307 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + + F + L ++P ++ Sbjct: 308 VKAEDIIDYTRRDNVAERLVKKFGAAMGETAIRALGASLPAVR 350 >gi|260549329|ref|ZP_05823549.1| periplasmic serine protease [Acinetobacter sp. RUH2624] gi|260407735|gb|EEX01208.1| periplasmic serine protease [Acinetobacter sp. RUH2624] Length = 365 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSH---VEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L +V L S S +S H+A + I G I+ +S++ Sbjct: 71 IFFKTLTFIYLLFIVVLMGKGCSTSKEGSAASSSSAHLAVVDIVGTIDASSNQSVNSEDT 130 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K P V + +M AS Sbjct: 131 NKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVYAVIGDMGASG 190 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 191 AYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 250 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 NP + +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 251 NPVQREHIQSVLDNVHTHFINAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 310 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + K+Q Sbjct: 311 ITSLMREL---KLDNKVDYTIERNPLQSILGRMGAEMGKGLSESVAQRLETSQDAKLQ 365 >gi|309973214|gb|ADO96415.1| Protease IV [Haemophilus influenzae R2846] Length = 615 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 126/250 (50%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+++ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGAIIDGESDDENSGGDTIARILRKAHDDNSVKAVVLRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A E ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADENTITGSIGIFAMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GVS V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVSSDGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKKQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 114/297 (38%), Gaps = 59/297 (19%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLTGEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI + K Sbjct: 75 LSELNGERVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY------PYVKPFLDK 147 N KPVI + Y ++ ++ I SIG + + Y K LDK Sbjct: 135 NAGKPVIAYADNY-SQGQYYLASFADEIYLN------SIGKVDIHGLSQENLYFKEMLDK 187 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 L V+ + K+ PF ++++ +A MQ + ++ +V VSE+R I D L Sbjct: 188 LAVTPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRKIKKDNVL 247 Query: 206 VLSDGRIWTGAEAKK---------VGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + +A K GL+ DVV ++ +L+ G D I+ Sbjct: 248 PNAK-QYLSDLKALKGNSTAYAQQRGLVTDVVTRLDLDKKLTALFGKGSDGKANLIE 303 >gi|326316008|ref|YP_004233680.1| peptidase S49 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372844|gb|ADX45113.1| peptidase S49 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 9/283 (3%) Query: 7 KIKTRY-VMLSLVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQE-----LIERIER 59 ++ TR ++ LV + V + + ++PH A + I+G+I E ++ + Sbjct: 68 RVFTRMAWLVFLVAVAWVLLARDVAAPSKSTPHTAVVDIKGEIASGAEASAEFVVAAMRS 127 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCA 117 D + A+++ ++SPGGS I I ++K + KPV V E ASA Y I+ Sbjct: 128 AFEDSGSQAVVLLINSPGGSPVQAGIINDEIIRLKAKYNKPVYAVVEETCASAAYYIAAG 187 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL ++KLGV + + + K PFS ++ K Sbjct: 188 ADQIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPMSEKQRTY 247 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++D + F+ +V + R T G WTG +A +GL D +G + V + + Sbjct: 248 AQAMLDQIHQQFIHVVQKGRGDRLKPTADTFSGLFWTGQQAVDMGLADHLGNLDYVAREV 307 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + + F + L ++P ++ Sbjct: 308 VKAEDIIDYTRRDNVAERLVKKFGAAMGETAIRALGASLPAVR 350 >gi|315180695|gb|ADT87609.1| protease IV [Vibrio furnissii NCTC 11218] Length = 616 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 21/275 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGG 78 S + + +A + G I D L + + DD A+++ + SPGG Sbjct: 317 SPTFDMAADDIAVVVASGAIMDGVQPRGTVGGDTLASLLRQARNDDKVKAVVLRVDSPGG 376 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SA+A E I I+ +K KPV+ + +AAS GY IS + + IVA T+L GSIG+ Sbjct: 377 SAFASEVIRNEIEAIKAAGKPVVISMSSLAASGGYWISMSGDQIVAQPTTLTGSIGIFSV 436 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L+KLG+ V +SP + ++ +Q ++ YH F+ LV+E R Sbjct: 437 ITTFEKGLNKLGIYTDGVGTSPFSGVG-VTTGLSDGIKDALQMGIEHGYHRFISLVAEHR 495 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPP 255 ++ + ++ GR+WT +A+K+GL+D +G ++ +L + +++ P Sbjct: 496 HMSEQEVDKVAQGRVWTAQDAQKLGLVDKLGDFDDAVALAASLAKLDTYNLYWVEEPLSP 555 Query: 256 KNYWFCDL-------KNLSISSLLEDTI-PLMKQT 282 + DL L ISSL+ D + P KQ Sbjct: 556 AQQFLQDLFGQVRVGLGLDISSLMPDALKPATKQL 590 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 43/275 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y S A + + G I + + Sbjct: 21 FIRLALTNLIFLLSIAIIYFIYIHAESPTPTVDKASALVLNLSGPIVEQRTYVNPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D T L+++L P + I +AI + K Sbjct: 81 GSVLGQDLPKENVLFDIVDTLRYAKDDQQVTGLVLALRDLPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I + V G Y K L+KL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKIFLSPDGAVMLRGYSAYNLYYKTLLEKLDVNTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD---------- 202 + K+ PF +++ A + + + +V V+ +R I Sbjct: 200 FRVGTYKSAIEPFIRDDMSDAARESASRWLTQLWGAYVDDVATNRQIDAKTLTPSMDEFL 259 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L S G + K GL+D + +++V L Sbjct: 260 ALLKQSSGN--LADLSLKAGLVDELATRQQVRAEL 292 >gi|50121267|ref|YP_050434.1| protease 4 [Pectobacterium atrosepticum SCRI1043] gi|49611793|emb|CAG75242.1| protease IV [Pectobacterium atrosepticum SCRI1043] Length = 616 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 12/268 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N+ +A + G I D +I D AL++ ++SPGGS A E Sbjct: 322 NNNQIAVVFANGAIIDGPETPGMVGGDTTAAQIRAARLDPKVKALVLRVNSPGGSVTASE 381 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + ++ KP++ + MAAS GY IS +N I+++ ++L GSIG+ + Sbjct: 382 LIRSELMSLRMAGKPIVVSMGGMAASGGYWISTPANAIISSASTLTGSIGIFGVITTFED 441 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV V +SP+ S + P+ QMMQ ++ Y F+ +V+++R ++ Sbjct: 442 SLESLGVHTDGVATSPLAD-LSITKSLPPEFSQMMQLSIERGYKNFIDIVAQARKKTPEQ 500 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR-KIKDWNPPKNYWFCD 262 ++ G +W G++AK+ GL+D +G ++ + L + P + Sbjct: 501 INEIAQGHVWVGSDAKENGLVDQIGDFDDAVKKAAELAKLGQYQLNWYAEQPGLLDTMLN 560 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAV 290 N S+ +LL + M V L V Sbjct: 561 QVNASVYALLPVAVQSMLPAPVAQLAEV 588 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 102/283 (36%), Gaps = 50/283 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F+ + I +++ ++ +Y + E + + + G + D Sbjct: 19 LNFIREFILNIFLIALILAGVGIYSQVKTTPEAATKGALLVDLTGVVVDQPTVNNKLRQL 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + DD+ T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGASSNRRQENSLFDIVDSIRQAKGDDNITGMVLDLSDFTGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 ++ KP+ S Y ++ +N + GS+ G Y K LDKL Sbjct: 139 FRDSGKPIYAVGDSYNQS-QYYLASFANTVSLTPQ---GSVDLHGFATNNLYFKSMLDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 V+ + K+ P+ +++P A +++ + ++ VS +R I + Sbjct: 195 KVTTNIFRVGTYKSAVEPYLRDDMSPAARDADGRWINALWQQYLNTVSANRQITPQQLFP 254 Query: 207 LS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G T A L+D V + QSL Sbjct: 255 GATSIIAGLQAVQGD--TARYALDNKLVDEVASRSVTEQSLVK 295 >gi|291276786|ref|YP_003516558.1| protease [Helicobacter mustelae 12198] gi|290963980|emb|CBG39819.1| protease [Helicobacter mustelae 12198] Length = 286 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 123/236 (52%), Gaps = 3/236 (1%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+ K K +L +V L +F + + ++A+I + G I DS + E+I++I Sbjct: 14 FITKYFKACIFLLIIVLL---FFFLHNDGGQKNANLAKIYLHGPIIDSTSIYEQIKKIKA 70 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + + ++ ++SPGG+ A I I+++ R PV+ V + AS Y S I Sbjct: 71 NPNIKGALLLINSPGGAVSASVEISDMIRELNQRIPVVAYVQGVMASGSYYGGMYSKQIF 130 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A +L+GSIGV+F ++ + K+GVS + V + K +P + P+ +++++ Sbjct: 131 ANRGALIGSIGVIFSSMNIQNLMQKIGVSQQGVSAGAYKEVGTPLRKWTPEEYAYIKNLI 190 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Y F+ VS++R + ++G+I+T A+K+GLID +GG ++ ++L Sbjct: 191 QEEYQMFIDDVSDARKLDKHNYKSFAEGKIFTAKNAQKLGLIDEIGGMDDAIEALK 246 >gi|332300301|ref|YP_004442222.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica DSM 20707] gi|332177364|gb|AEE13054.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica DSM 20707] Length = 594 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 14/240 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERIS 61 L V+L+ VY + S +V + G+I S L +RI + Sbjct: 289 LHFVSLSDVYATRGSG-RKGGANVGVLFAEGEINVEVADSPFNTKKVVSDRLADRILEMG 347 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DD AL+V ++SPGGS+Y E ++ A+ K KPV+ + + AAS GY +S ++ I Sbjct: 348 EDDDYDALVVRVNSPGGSSYISEQLWYAVHKASENKPVVISMGDYAASGGYYMSSGASYI 407 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A +++ GSIG+ P +K+GV VK+ +P + + Q Sbjct: 408 FAEPSTITGSIGIFGVVPNATKLANKIGVHQDVVKTGQHADLGAPDRPWTEEERALFQQY 467 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V+ Y F++ VSE RN+ + ++ GR+WTGA+A +GL+D +GG ++ + Sbjct: 468 VNRGYALFLKRVSEGRNMTTTQVDSIAQGRVWTGAQALSLGLVDELGGLQDAIAYAASQA 527 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++E I+ DD + ++++ PG + EA+ A++ K I + + GY Sbjct: 89 VLEAIDEAKNDDRIKGIYLNVTDPGCGYASAEALRGALEDFKEDGKFIVSYSDFYSLKGY 148 Query: 113 LISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 ++ ++ + + GSI G+ + K LDK+GV + K K+ P+ Sbjct: 149 YLASVADQLYVNKE---GSIAFDGLAGGAVFFKDLLDKIGVEMMVFKVGTFKSAVEPYIL 205 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLID 225 + ++ + + + + V SRN+ + L+D + GLID Sbjct: 206 NSMSEANRTQITSYLGDIWGRILSEVGASRNLDSVRLQSLADSMQSVRPTDSYLANGLID 265 Query: 226 VVGGQEEVWQSLYAL-GVDQS 245 Q++ ++L +L GVD+ Sbjct: 266 GALYQDQALETLCSLVGVDEK 286 >gi|87303026|ref|ZP_01085830.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 5701] gi|87282522|gb|EAQ74481.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. WH 5701] Length = 270 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 6/265 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARIAI G I + +++ + ++ AL++ + SPGG+ + I AI Sbjct: 8 KSRKSMARIAIEGAISGPTRERVVKALRQVEE-REFPALLLRIDSPGGTVGDSQEIHAAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++++ V+ ++AS G + A+ IVA ++ GSIGV+ + + L+++G Sbjct: 67 GRLRSKGCRVVASFGNISASGGVYVGVAAEKIVANPGTITGSIGVILRGNNISKLLERIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +S ++VKS K SP + ++Q ++DSSY FV V+ R + + +D Sbjct: 127 ISFETVKSGLYKDILSPDRALTADERALLQGLIDSSYSQFVEAVATGRGLNESEVRGFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GR+++GA+A +GLID +G +E + L G+D++ + + P + L++ Sbjct: 187 GRVFSGAQAIALGLIDELGDEEHARRLAARLAGLDETKTQPVIFGKPPKRLAGLIPGLNL 246 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWNP 293 L+ + + Q LW +W P Sbjct: 247 LGGLQQALSMELAWCGQPLW-LWRP 270 >gi|315126527|ref|YP_004068530.1| protease IV, a signal peptide peptidase [Pseudoalteromonas sp. SM9913] gi|315015041|gb|ADT68379.1| protease IV, a signal peptide peptidase [Pseudoalteromonas sp. SM9913] Length = 621 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 130/259 (50%), Gaps = 16/259 (6%) Query: 35 SPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + VA + +G I D + + + DD A+++ + S GGS +A E Sbjct: 322 TEKVAVVVAKGTIVDGERRAGEIGGDSTAALLRKARLDDKVKAVVLRIDSGGGSMFASEV 381 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + +K KPVI + +AAS GY I+ A+N I AA +++ GSIGV + + Sbjct: 382 IRAEVLALKAAGKPVIASMSSVAASGGYWIASAANEIWAAPSTITGSIGVFGTFMTFEDT 441 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV V ++ + S +N K +++Q V+ +Y F+ +V+E+RN+ ++ Sbjct: 442 LAKIGVYSDGVATTELAGF-SITRPLNEKMAKVIQMSVEEAYGRFLDVVAEARNMTPEQV 500 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+W ++A+++GL+D +G +++ ++ L ++ IK P+ D Sbjct: 501 DKIAQGRVWIASQAQELGLVDKLGNKQDAIKAAAELAKLNYYDVKTIKQSLSPQEKMLQD 560 Query: 263 LKNLSISSLLEDTIPLMKQ 281 + S+ ++ + L Q Sbjct: 561 IFG---SAAVKSVLGLETQ 576 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 98/291 (33%), Gaps = 49/291 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F + I + +V V S + V R+ + G I + Sbjct: 13 INFSRRLILNVLFLFLVVIFIVSVSSDGDKIIVEEGSVLRLNLNGPIVEEKTYIDPVEAA 72 Query: 51 ----------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKV 93 +++E I ++D +A+++ L P + I +A++ Sbjct: 73 INDATASADSPSEILLDDVVEVINEAAQDSRISAILLDLQEMPKAHLNKLKQITQALETF 132 Query: 94 KNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLG 149 K K VI A Y I+ ++ I GS+ G Y K L+KL Sbjct: 133 KATGKKVIAS-GYYYTQAQYYIAAHADEIAMHPY---GSVLIEGYGMYPLYFKDALEKLE 188 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF ++++ A + + + + ++ + + VS R Sbjct: 189 VTQHIFRVGTFKSAVEPFIRNDMSEAAKEANRVWLGALWNEYKQDVSAVRPFDESNFDET 248 Query: 208 SDGRIWT----------GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 D ++ G A +D + +++ Q L L + K Sbjct: 249 MD--VYLAKMQAANGDAGKYALDNQWVDSLKTNQQIRQQLIELVGENEDGK 297 >gi|303252103|ref|ZP_07338272.1| protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248290|ref|ZP_07530316.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649085|gb|EFL79272.1| protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855224|gb|EFM87401.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 618 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQIED---------SQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSSGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLQKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEISEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|153000814|ref|YP_001366495.1| signal peptide peptidase SppA [Shewanella baltica OS185] gi|151365432|gb|ABS08432.1| signal peptide peptidase SppA, 67K type [Shewanella baltica OS185] Length = 615 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 22/269 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGTQPAGQIGGESTAELLRKARFDKHVKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASIGVHTDGVSTSEWAG-LSVTRTLSPQVEAIIQRHIERGYLDFISLVAKERKMTIEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++ L+D +G +E L R I+ P+ + Sbjct: 503 DKIAQGRVWSGKKALELSLVDELGDLDEAIAKAAKLADMTLFDTRVIEQELTPEQRFMQQ 562 Query: 263 L---------KNLSISSLLEDTIPLMKQT 282 + +LS SS+LE + + + Sbjct: 563 MFASVSSYLPASLSQSSMLEQMLAQLTSS 591 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 94/277 (33%), Gaps = 48/277 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 +K+ + ++ ++ S ++ + + G I D ++ ++ +E + Sbjct: 22 TRKLILNLIFFGILAAIIISIGSSEDIQVEDNSALVLNLAGSIVDQKQQVDPLEAAFKQG 81 Query: 63 -DDSATA------LIVSLSSPGGSAYAGEAIF---------------------RAIQKVK 94 + +A ++ ++ +A + I A+ + K Sbjct: 82 NNGNADGEILLADVLYVIN----NAAQDQRISTLVLDLADLKRAGISKLQSIGDALNRFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + Y ++ ++ I V G+ Y K LDKL + Sbjct: 138 ESGKKVVAIGNYYEQNQYFLASFADTIYLNPQGGVSLDGLSMYNQYFKSALDKLKIKAHI 197 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI----------PYD 202 + K+ P+ +++ A + ++ + + + V+ +RNI Y Sbjct: 198 FRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAGNRNIEPNSLVPDATTYL 257 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++G + A A + +D + E+ Q++ Sbjct: 258 AELDKANGD--SAAMAINMKWVDSLATTEDFRQTMLE 292 >gi|307257321|ref|ZP_07539091.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864171|gb|EFM96084.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 618 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLQKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEISEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|333006817|gb|EGK26314.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-272] Length = 614 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 306 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 365 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + K V+ + MAAS GY IS +N IVA ++L Sbjct: 366 LRVNSPGGSVTASEVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLT 425 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 426 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 484 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 485 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 543 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 544 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 580 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 23 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 82 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 83 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 142 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 143 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLNVSTHVFRV 201 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 202 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 261 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 262 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 311 >gi|325578196|ref|ZP_08148331.1| signal peptide peptidase SppA [Haemophilus parainfluenzae ATCC 33392] gi|325159932|gb|EGC72061.1| signal peptide peptidase SppA [Haemophilus parainfluenzae ATCC 33392] Length = 620 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 19/273 (6%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 S + VA + + G I D + +++ + + ++ A+++ ++SPGGS Sbjct: 320 SVDPNEKNIVAVVNVEGTIIDGESDEESAGGDTIVKLLRQAYDNEKVKAVVLRVNSPGGS 379 Query: 80 AYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I + + + K+ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ + Sbjct: 380 AFASEIIRQETENLQKSGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFALF 439 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + + K+G+S V ++ + AE S S + + Q +++ Y F+ +VS R Sbjct: 440 PTFENTIKKMGMSTDGVATTDL-AETSALSPLGKNTQDIYQLSIENGYDRFLEVVSRGRQ 498 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + DK ++ G++W G +A+K GL+D +G + + AL + + +++ Sbjct: 499 LSKDKVDKIAQGQVWLGQDAQKNGLVDELGDIDVAIDKVVALVNQHPDKYMDNFSV---Q 555 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 W D SS L +KQ K Q L W Sbjct: 556 WLVDED----SSFLAQLDRKLKQ-KGQALLTNW 583 Score = 87.9 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 92/242 (38%), Gaps = 34/242 (14%) Query: 1 MEFVLK---KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQIEDSQE---- 52 + F+ +L+L+ L + + A + + G + D+ E Sbjct: 15 LNFIRNLVMNFVFLLFVLALIFLVGLLGDGKKSQVLSGDQGALYLNLTGYLADNTEDMLS 74 Query: 53 ---------------------LIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAI 90 +++ I D+ L+++L+ GG + E + +AI Sbjct: 75 WEKELQRLNNEKVSYKYSTFDVVQSILSAKDDERIRGLVLNLNDFEGGDLPSLEYVGKAI 134 Query: 91 QKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q K KPVI S Y ++ ++ I VG G+ ++ Y K L+KL Sbjct: 135 QSFKESEKPVIAYADNYTQS-QYFLASFADEIYLNPIGQVGIQGLRYENLYFKSMLEKLE 193 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 ++ + K+ PF +++P+A MQ + + +++ + +R+I + L Sbjct: 194 ITPHIFRVGTYKSAVEPFLRDDMSPEARANMQKWLGGMWQNYMQTLMVNRHITANDVLPN 253 Query: 208 SD 209 + Sbjct: 254 AQ 255 >gi|238020513|ref|ZP_04600939.1| hypothetical protein GCWU000324_00395 [Kingella oralis ATCC 51147] gi|237867493|gb|EEP68499.1| hypothetical protein GCWU000324_00395 [Kingella oralis ATCC 51147] Length = 333 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 26/272 (9%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGG 78 S PH A + ++G I + E L E +E ++++ A+++ +SPGG Sbjct: 70 VSAGKFTNMQKPHTAVVNLKGVIGGNDEHDQVKILREGMEAAYKNNNVKAILLRANSPGG 129 Query: 79 SAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 S F I+++K PV ++ AS Y I+ A++ I A +SL+GSIGV+ Sbjct: 130 SPVVSNIAFEEIRRMKREHADIPVYVVAEDVCASGCYYIAAAADKIYADPSSLMGSIGVI 189 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 V + K+GV + + K PF+ +P+ + Q ++D + F++ V E Sbjct: 190 GSSFDVTELMQKIGVKRRVRIAGDNKGMGDPFTPESPEQQAIFQQMLDQVHAEFIKSVRE 249 Query: 196 SRNIPYDKT--LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 RN ++ L GR++TG EAKK GL+D +G V + + + D+ Sbjct: 250 GRNGKLNEKAYPDLFSGRVFTGIEAKKAGLVDDLGNIYSVARDVV------KAPDLVDYT 303 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 P +N ++SLL+ + Q K++ Sbjct: 304 P---------ENNDLASLLQRGLGARVQLKLE 326 >gi|257067187|ref|YP_003153443.1| signal peptide peptidase SppA, 36K type [Anaerococcus prevotii DSM 20548] gi|256799067|gb|ACV29722.1| signal peptide peptidase SppA, 36K type [Anaerococcus prevotii DSM 20548] Length = 327 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 118/223 (52%), Gaps = 4/223 (1%) Query: 35 SPHVARIAIRGQIEDSQE---LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + + G I + ++E ++ D +I++++SPGGS YA E I I+ Sbjct: 60 KEKIKVVDVDGVISSNDANDFVVEELKNAKEDPLVKGVILNVNSPGGSVYASERIANQIK 119 Query: 92 KVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +K KPV T + EMAAS GY IS ++ I A+ + GSIGV+ Q ++ +K G+ Sbjct: 120 ALKEAEKPVYTVMGEMAASGGYYISALTDRIYASNETWTGSIGVIIQSYSLQGLFEKYGI 179 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ + MK S +++ + + Q +VDS++ FV++V+E R + + L+DG Sbjct: 180 KEQNITTGKMKDAGSQGRDMSKEEKEYFQGLVDSAFDRFVKIVAEGRGLSEREVRKLADG 239 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 R++ G++A GL+D +G + + + + I++ N Sbjct: 240 RVYDGSQALANGLVDKIGDLDSAIGDMASENNLEDPMVIRNEN 282 >gi|86605621|ref|YP_474384.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] gi|86554163|gb|ABC99121.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-3-3Ab] Length = 268 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 125/244 (51%), Gaps = 5/244 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + RI + G I+ + +++ ++ + A+++ + SPGG+ + I+ A+ +++ Sbjct: 13 QIGRIEVTGVIDGRTRERVLKALQEVEE-RQIPAVVLRIDSPGGTVADSQEIYNALSRLR 71 Query: 95 NRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 RK ++ +AAS G I+ + IV+ ++ GSIGV+ + ++ LDK+G+S Sbjct: 72 ERKGTRIVASFGNIAASGGVYIAMGAEKIVSNPGTITGSIGVIIRGNNLERLLDKIGISF 131 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ P+ ++Q+++D +Y FV+ V+ +R + + +DGRI Sbjct: 132 KVIKSGPYKDILSFDRELTPEERNILQELIDITYGQFVQTVAAARRLSVNVVKTFADGRI 191 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 ++G +A +G++D +G +E+ L K D P + W L + L Sbjct: 192 FSGEQALHLGVVDRLGTEEDARLWAAELSGLPPDAKFCDLLPRRRGWARLLPAAEALARL 251 Query: 273 EDTI 276 + + Sbjct: 252 QFEV 255 >gi|333018733|gb|EGK38026.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-227] Length = 618 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + K V+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLNVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|126651359|ref|ZP_01723566.1| SppA [Bacillus sp. B14905] gi|126591888|gb|EAZ85971.1| SppA [Bacillus sp. B14905] Length = 337 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 117/223 (52%), Gaps = 15/223 (6%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 ++ +A + + G I+D Q +++++ I DD+ +++S++SPGG Sbjct: 56 DNYDKRIAYLKVDGTIQDIGSSSLWQPVAYDHQFFLDQLDNILYDDTIQGIVLSVNSPGG 115 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 I++ + K+K + P+ + MAAS GY IS ++ I A ++ GSIGV+ Sbjct: 116 GVKESAEIYKKLLKIKEERQIPIYVSMDSMAASGGYYISAPADKIFAHRDTITGSIGVIM 175 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q + +K+GV ++ KS K SP +V P+ MMQD+++ +Y FV +V + Sbjct: 176 QSINYQALAEKVGVKFETFKSGEHKDMLSPMRDVTPEERAMMQDMINETYEEFVDIVEQG 235 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 RN+ ++DGRI G +A + GL+D +G +E +L A Sbjct: 236 RNMSEADVKKVADGRILGGTKALEAGLVDEIGDEEAAIAALRA 278 >gi|312109911|ref|YP_003988227.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y4.1MC1] gi|311215012|gb|ADP73616.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. Y4.1MC1] Length = 336 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 25/277 (9%) Query: 37 HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + G I+D+ + + IE+ DD+ A+I+ + SPGG Sbjct: 61 KIVVLEVNGVIQDAGDTEALFTASGYNHRAFLRMIEQAKNDDTVKAIILRVDSPGGGVVE 120 Query: 83 GEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 I + K+K P+ + MAAS GY IS A++ I A+ +L GS+GV+ Q Sbjct: 121 SAEIHDQLLKLKKETKKPIYVSMGTMAASGGYYISTAADKIFASPETLTGSLGVIIQSFN 180 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + K GV + ++KS P K +P ++ + +++Q ++ +SY FV+++SE R++P Sbjct: 181 YEGLAKKYGVELVTIKSGPYKDIMNPARKMTEEEKEILQRLIHNSYEGFVKVISEGRHLP 240 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + ++DGRI+ G +AK++ LID G E+ A+ D + + ++ F Sbjct: 241 ESEVRKIADGRIYDGRQAKQLKLIDEFGYLEDTI---AAIKKDYDLANAQVVKYTNDFSF 297 Query: 261 CDLKNLSISSLLE------DTIPLMKQTKVQGLWAVW 291 L + +S ++ + I L L ++ Sbjct: 298 GSLFKMELSRMIAPKHEATELIKLFSNPSSPRLMYLY 334 >gi|153826825|ref|ZP_01979492.1| protease IV [Vibrio cholerae MZO-2] gi|149739346|gb|EDM53592.1| protease IV [Vibrio cholerae MZO-2] Length = 616 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D L+ + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVCQTLAE 294 >gi|169829578|ref|YP_001699736.1| putative signal peptide peptidase sppA [Lysinibacillus sphaericus C3-41] gi|168994066|gb|ACA41606.1| Putative signal peptide peptidase sppA [Lysinibacillus sphaericus C3-41] Length = 337 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 15/220 (6%) Query: 35 SPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSAY 81 +A + + G I+D Q +E+++ I DD+ +++S++SPGG Sbjct: 59 DKRIAYLKVDGTIQDIGSSSLWQPVAYDHQFFLEQLDSILYDDTIEGIVLSVNSPGGGVK 118 Query: 82 AGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I++ + K+K + P+ + MAAS GY IS ++ I A ++ GSIGV+ Q Sbjct: 119 ESAEIYKKLLKIKEERQIPIYVSMDSMAASGGYYISAPADKIFAHRDTITGSIGVIMQSI 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + +K+GV ++ KS K SP +V P+ MMQD+++ +Y FV +V + RN+ Sbjct: 179 NYQALAEKVGVKFETFKSGEHKDMLSPMRDVTPEERAMMQDMINETYEEFVDIVEQGRNM 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++DGRI G +A + GL+D +G +E +L A Sbjct: 239 SEADVKKVADGRILGGTKALEAGLVDEIGDEEAAIAALRA 278 >gi|229586788|ref|YP_002845289.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] gi|228021838|gb|ACP53546.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] Length = 304 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 154/297 (51%), Gaps = 15/297 (5%) Query: 6 KKIKTRYV---MLSLVTLTVVYFSWSSH--------VEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R + + +++ + +V+ + N ++A + I I + ++ Sbjct: 12 RQIKSRLLIWKLTAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRD 71 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + MAAS GYLI Sbjct: 72 KKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNILRKISAKKPVVIVMGTMAASGGYLI 131 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + I++ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 132 SLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + D ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 192 RIAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTAL 251 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + +KD+ D+ I + P + G+ A++ Sbjct: 252 KWLQEVQKINVNLLVKDYQLKPKPKLMDI----ILEDFDSIAPSFFKNSFNGIKAIF 304 >gi|307250517|ref|ZP_07532462.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857459|gb|EFM89570.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 618 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q +++ Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIENG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVIELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEISEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGAYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|225175869|ref|ZP_03729862.1| signal peptide peptidase SppA, 36K type [Dethiobacter alkaliphilus AHT 1] gi|225168793|gb|EEG77594.1| signal peptide peptidase SppA, 36K type [Dethiobacter alkaliphilus AHT 1] Length = 304 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 22/268 (8%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPH--------VARIAIRGQIEDSQ------------E 52 ++L+++ +TV + +P VA I + G I D Q + Sbjct: 10 IVLAVIGITVFFALAQIFRPPGAPQRGAGSAQAVAVIHLEGIIMDGQIQPLFGAPGGTRQ 69 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAG 111 +I +++ + D A+++ ++SPGG+ A + ++ +Q++K KPV+ V EMAAS G Sbjct: 70 IIGQLQDAAADRDVAAVVLRINSPGGTPAASQEVYNEVQRLKESGKPVVVSVGEMAASGG 129 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ IVA S+ GSIGV+ + + LG+ + KS K S ++ Sbjct: 130 YWIASAADEIVANPASVTGSIGVIMETTNFVELYEMLGIESEVFKSGQYKDMGSAARPLS 189 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 +++Q +VD + FV +V+ R++ + L ++DGRI+TG +AK++GL+D +G Sbjct: 190 DDEREIIQSMVDDIFQQFVDVVASGRSLDREAVLEVADGRIFTGRQAKELGLVDRLGDLN 249 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + L + +IK+ ++ W Sbjct: 250 TAIDAAGELAGIEGTPRIKEMRT-RSPW 276 >gi|170700222|ref|ZP_02891238.1| peptidase S49 [Burkholderia ambifaria IOP40-10] gi|170134855|gb|EDT03167.1| peptidase S49 [Burkholderia ambifaria IOP40-10] Length = 330 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSSDAKFSAGGHHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q++++ + F++ V E R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQELLNQVHAQFIKAVKEGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|260769000|ref|ZP_05877934.1| protease IV [Vibrio furnissii CIP 102972] gi|260617030|gb|EEX42215.1| protease IV [Vibrio furnissii CIP 102972] Length = 616 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 21/275 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGG 78 S + + +A + G I D L + + DD A+++ + SPGG Sbjct: 317 SPTFDMAADDIAVVVASGAIMDGVQPRGTVGGDTLASLLRQARNDDKVKAVVLRVDSPGG 376 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SA+A E I I+ +K KPV+ + +AAS GY IS + + IVA T+L GSIG+ Sbjct: 377 SAFASEVIRNEIEAIKAAGKPVVISMSSLAASGGYWISMSGDQIVAQPTTLTGSIGIFSV 436 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L+KLG+ V +SP + ++ +Q ++ YH F+ LV+E R Sbjct: 437 ITTFEKGLNKLGIYTDGVGTSPFSGVG-VTTGLSDGIKDALQMGIEHGYHRFISLVAEHR 495 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPP 255 ++ + ++ GR+WT +A+K+GL+D +G ++ +L + +++ P Sbjct: 496 HMSEQEVDKVAQGRVWTAQDAQKLGLVDKLGDFDDAVALAASLAKLDTYNLYWVEEPLSP 555 Query: 256 KNYWFCDL-------KNLSISSLLEDTI-PLMKQT 282 + DL L +SSL+ D + P KQ Sbjct: 556 AQQFLQDLFGQVRVGLGLDVSSLMPDALKPATKQL 590 Score = 82.1 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 43/275 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y S A + + G I + + Sbjct: 21 FIRLALTNLIFLLSIAIIYFIYIHAESPTPTVDKASALVLNLSGPIVEQRTYVNPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D T L+++L P + I +AI + K Sbjct: 81 GSVLGQDLPKENVLFDIVDTLRYAKDDKQVTGLVLALRDLPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I + V G Y K L+KL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKIFLSPDGAVMLRGYSAYNLYYKTLLEKLDVNTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD---------- 202 + K+ PF +++ A + + + +V V+ +R I Sbjct: 200 FRVGTYKSAIEPFIRDDMSDAARESASRWLTQLWGAYVDDVATNRQIDAKTLTPSMDEFL 259 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L S G + K GL+D + +++V L Sbjct: 260 ALLKQSSGN--LADLSLKAGLVDELATRQQVRAEL 292 >gi|75674258|ref|YP_316679.1| peptidase S49, SppA [Nitrobacter winogradskyi Nb-255] gi|74419128|gb|ABA03327.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Nitrobacter winogradskyi Nb-255] Length = 327 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 158/306 (51%), Gaps = 15/306 (4%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + ++ + +++ V Y S S + R+ I G I Q+ +E +ER+ Sbjct: 19 KLTFWRVASALIVIGAVVALGAYASPLGGRLTGSSAIQRVNIDGLIRSDQKRVEALERLG 78 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + A A+IV ++SPGG+ E ++ A+ ++K +KP++ V + AS GY+ + AS+ I Sbjct: 79 K-SKAPAVIVHINSPGGTTAGSEELYEALTRLKAKKPMVVVVEGLGASGGYIAALASDHI 137 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA +T+LVGSIGVLFQYP V L +GV +++VKSSP+KA PS + +P+A + + Sbjct: 138 VAQQTALVGSIGVLFQYPNVTELLKTVGVKVEAVKSSPLKAAPSGYEPTSPEARAAIDAL 197 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V S+ WF LV R + + ++DGR++TG +A + LID +G ++ L A Sbjct: 198 VKDSFAWFRGLVQNRRGMDDAQLEKVADGRVFTGRQALDLKLIDQLGDEKVAIAWLVAEK 257 Query: 242 VDQSIRKIKDWNPPKNYW------------FCDLKNLSISSLLEDT--IPLMKQTKVQGL 287 ++D+ + F L SI+ +E + + + G+ Sbjct: 258 KVAPDLPVRDFKLTPRFTDLTFIRTAASVAFDALGLGSIARQVEQAGIVRAADRLNLDGM 317 Query: 288 WAVWNP 293 A+W+P Sbjct: 318 LALWHP 323 >gi|30062971|ref|NP_837142.1| protease 4 [Shigella flexneri 2a str. 2457T] gi|56479902|ref|NP_707347.2| protease 4 [Shigella flexneri 2a str. 301] gi|110805427|ref|YP_688947.1| protease 4 [Shigella flexneri 5 str. 8401] gi|30041220|gb|AAP16949.1| protease IV, a signal peptide peptidase [Shigella flexneri 2a str. 2457T] gi|56383453|gb|AAN43054.2| protease IV, a signal peptide peptidase [Shigella flexneri 2a str. 301] gi|110614975|gb|ABF03642.1| protease IV, a signal peptide peptidase [Shigella flexneri 5 str. 8401] gi|281600872|gb|ADA73856.1| putative Periplasmic serine proteases (ClpP class) [Shigella flexneri 2002017] gi|313649199|gb|EFS13633.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 2a str. 2457T] gi|332758842|gb|EGJ89157.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 2747-71] gi|332759159|gb|EGJ89468.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-671] gi|332767154|gb|EGJ97349.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 2930-71] gi|333003711|gb|EGK23247.1| signal peptide peptidase SppA, 67K type [Shigella flexneri VA-6] gi|333004305|gb|EGK23836.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-218] gi|333018322|gb|EGK37621.1| signal peptide peptidase SppA, 67K type [Shigella flexneri K-304] Length = 618 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + K V+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|262166101|ref|ZP_06033838.1| protease IV [Vibrio mimicus VM223] gi|262025817|gb|EEY44485.1| protease IV [Vibrio mimicus VM223] Length = 616 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + V+ + +A + G I D + + D + Sbjct: 306 AISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-VTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D + + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLD-VSALLPKSLQPLATEWQ 591 Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + + A I + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPSVNKASALILNLSGPIVEQSTHINPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D++ T L+++L P + I +AI + K+ Sbjct: 81 GSVFGEELPRENVLFDIVDTLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKS 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVYAVSDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-----LVL 207 + K+ PF +++ A + + + +V V+ +R I + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIDIKTLTPTMDEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + +G A K+VGL+D + +++V Q+L Sbjct: 260 AQLKEVSGDLAALSKQVGLVDELATRQQVRQALAE 294 >gi|251792410|ref|YP_003007136.1| signal peptide peptidase SppA, 67K type [Aggregatibacter aphrophilus NJ8700] gi|247533803|gb|ACS97049.1| signal peptide peptidase SppA, 67K type [Aggregatibacter aphrophilus NJ8700] Length = 628 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 D +A + + G I D + + + + + D +++ ++SPGGSA+A Sbjct: 323 GDTENKIAVVNVEGAIIDGESDEDNVGGDTIAKLLRQAYDDKKVKGVVLRVNSPGGSAFA 382 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + ++ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P Sbjct: 383 SEVIRQELTHLQQAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTF 442 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + K+GV+ VK+S + FS ++ ++Q ++ Y F+ VSE R++ Sbjct: 443 EKTIKKIGVTADGVKTSDL-TLGLLFSPLSSPLNDVIQLEIEHGYDQFLTKVSEGRHLTK 501 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK-DWNPPKNYWF 260 ++ ++ G++W G+EA + L+D +G + L ++ + K K D W Sbjct: 502 EQVDRIAQGQVWLGSEALEHKLVDELGTLDTALGKAIELVNEKRLEKDKLDEGTFSVEWI 561 Query: 261 CDLKNLSISSLL 272 D ++ + +L Sbjct: 562 VDEESSFLKKML 573 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 94/239 (39%), Gaps = 32/239 (13%) Query: 2 EFVLKKIKTRYVMLSL-VTLTVVYFSWSSHVEDNSPHVAR-IAIRGQIEDSQE------- 52 + V+ + +V++ L V V+ V N A + + G + D+++ Sbjct: 20 DLVMNIVFLIFVLVLLSVIGIVIGADKQEKVALNGDQGALFLNLDGYLADNRDDQSDLKN 79 Query: 53 ------------------LIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKV 93 ++ I+ S+DD L++ L+ GG A E + AI+ Sbjct: 80 LLKELDNQNIPQQYSTFDVVYAIDSASQDDRIRGLVLDLNFFQGGDLPALEYVGEAIENF 139 Query: 94 KNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K K VI A Y ++ ++ I V G+ + Y K LDKL V+ Sbjct: 140 KESGKQVIAYADNYN-QAQYFLASYADEIYMNPIGAVAIEGLAQENLYYKDMLDKLEVNP 198 Query: 153 KSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + K+ P+ ++++ +A +Q ++ ++ + + V+E+R+I + Sbjct: 199 HVFRVGAYKSAVEPYLRNDMSDEAKANLQRWLNVMWNNYKQQVAENRDIKQSAVAPDAQ 257 >gi|189218092|ref|YP_001938734.1| Periplasmic serine protease, ClpP class [Methylacidiphilum infernorum V4] gi|189184950|gb|ACD82135.1| Periplasmic serine protease, ClpP class [Methylacidiphilum infernorum V4] Length = 331 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 12/276 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPG 77 S +A I +RG I +++ +++ D +IV+++SPG Sbjct: 48 SGDFSTKDSKIALIHLRGLISQDEAGSFTQNSVEDIKVQLKAAREDKKVKGIIVAINSPG 107 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A + I+ I+ +N KPV+ + MAAS GY + + ++A + ++ GSIGV+ + Sbjct: 108 GEVNASDVIYHEIRLTRNVKPVVIYMESMAASGGYYSAVGGSYLMANDLTITGSIGVIME 167 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 VK +DK+G+ KS MK +P E+ P+ +Q ++D +Y+ F+ +VS+ R Sbjct: 168 SFLVKDLMDKVGIKAFVFKSGKMKDLLNPTREMTPEEQAFVQGLIDEAYNKFISIVSKER 227 Query: 198 NIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 +I +K L+DGRI+ G +A K GLID +G E+ + L QS R I+ P K Sbjct: 228 HIDINKLKSNLADGRIFMGEDALKNGLIDGLGYFEDAFNKCKELSKVQSARLIRYVPPFK 287 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQG-LWAVW 291 L + ++ +E P ++ G L+ ++ Sbjct: 288 ISNLFRLFSKGMTPKIELGYPAVRFPLSSGQLYYLY 323 >gi|34540445|ref|NP_904924.1| signal peptide peptidase SppA, 67K type [Porphyromonas gingivalis W83] gi|34396758|gb|AAQ65823.1| signal peptide peptidase SppA, 67K type [Porphyromonas gingivalis W83] Length = 595 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 15/287 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERI 60 L V+L+ V + + + +A + G+I + +QEL + I+ Sbjct: 286 LRFVSLSQVLANGPMN-KTKGSRIAVLFAEGEITEEIIKKPFDTDGSSITQELAKEIKAA 344 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + DD A+++ ++SPGGSA+ E I++ + +K +KP++ + ++AAS GY I+CA+N Sbjct: 345 ADDDDIKAVVLRVNSPGGSAFTSEQIWKQVADLKAKKPIVVSMGDVAASGGYYIACAANS 404 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA T+L GSIG+ +P K+GV++ V++S + F+ + + ++Q Sbjct: 405 IVAEHTTLTGSIGIFGMFPNFAGVAKKIGVNMDVVQTSKYADLGNTFAPMTVEDRALIQR 464 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ Y F+ VSE RN + ++ GR+W G +A +GL+D +GG + + L Sbjct: 465 YIEQGYDLFLTRVSEGRNRTKAQIDSIAQGRVWLGDKALALGLVDELGGLDTAIKRAAKL 524 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 I+ +N++ L + + ++ +++ L Sbjct: 525 AQLGGNYSIEYGKTKRNFFEELLSSSAADMKSAILSTILSDPEIEVL 571 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 11/230 (4%) Query: 54 IERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +E I + + + T + + L S G + E + RA+Q K + + G Sbjct: 87 VEAIGQAKNNPNITGIFLDLDNLSVG--MASAEELRRALQDFKMSGKFVVSYADRYTQKG 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y +S ++ + ++G IG+ Q + K LDK GV ++ K KA PF + Sbjct: 145 YYLSSIADKLYLNPKGMLGLIGIATQTMFYKDALDKFGVKMEIFKVGTYKAAVEPFMLNR 204 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW-TGAEAKKVGLIDVV 227 ++ + + ++ + ++ESR D + +D G ++ +A ++ L+D + Sbjct: 205 MSDANREQITTYINGLWDKITSDIAESRKTAMDSVKMFADKGEMFGLAEKAVEMKLVDEL 264 Query: 228 GGQEEVWQSLYAL---GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + +V + L + G +R + N K I+ L + Sbjct: 265 AYRTDVEKELKKMSQRGEKDELRFVSLSQVLANGPMNKTKGSRIAVLFAE 314 >gi|15892681|ref|NP_360395.1| protease IV [Rickettsia conorii str. Malish 7] gi|15619853|gb|AAL03296.1| protease IV [Rickettsia conorii str. Malish 7] Length = 304 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 154/297 (51%), Gaps = 15/297 (5%) Query: 6 KKIKTRYV---MLSLVTLTVVYFSWSSH--------VEDNSPHVARIAIRGQIEDSQELI 54 ++IK+R + + +++ + +V+ + N ++A + I I + ++ Sbjct: 12 RQIKSRLLIWKLAAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRD 71 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +++++I D ALIV+++SPGG+ E I+ ++K+ +KPV+ + MAAS GYLI Sbjct: 72 KKLKKIIDDSHIKALIVNVNSPGGTVVGAEKIYNILRKISAKKPVVIVMGTMAASGGYLI 131 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S + I++ ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ Sbjct: 132 SLGGDYIISHNGTITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAV 191 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + D ++ +Y++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ Sbjct: 192 RVAIMDNIEDTYNFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTAL 251 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + +KD+ D+ I + P + G+ A++ Sbjct: 252 KWLQEVQKINVNLLVKDYQLKPKPKLMDI----ILEDFDSIAPSFFKNSFNGIKAIF 304 >gi|157158760|ref|YP_001463065.1| protease 4 [Escherichia coli E24377A] gi|157080790|gb|ABV20498.1| protease 4 [Escherichia coli E24377A] Length = 618 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + K V+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKLVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|205352978|ref|YP_002226779.1| protease 4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272759|emb|CAR37677.1| protease IV [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628052|gb|EGE34395.1| protease 4 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 618 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 13/276 (4%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D ++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKTIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRK 248 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLD 548 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P D S+ ++L + I M + Sbjct: 549 YYQDEPTVLDMVMDSMTGSVRTMLPEAIQAMLPAPL 584 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|27375852|ref|NP_767381.1| proteinase IV [Bradyrhizobium japonicum USDA 110] gi|27348990|dbj|BAC46006.1| proteinase IV [Bradyrhizobium japonicum USDA 110] Length = 326 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 144/270 (53%), Gaps = 15/270 (5%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +AR+ I G I + + +ER+ + A A+IV ++SPGG+ E ++ ++ ++K +K Sbjct: 54 IARVQIDGLIRSDSDRTQALERL-ENSQAAAVIVHINSPGGTTAGSEQLYDSLVRLKAKK 112 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P++ V +AAS GY+ + AS+ I+A ++SLVGSIGVLFQYP V L +GV ++ VKS Sbjct: 113 PLVVVVEGLAASGGYITAIASDHIIAQQSSLVGSIGVLFQYPNVTELLKTIGVKVEEVKS 172 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP+KA P+ F +P+A + ++V SY WF LV E R + + ++DGR++TG + Sbjct: 173 SPLKAAPNGFEPTSPEARAALDELVKDSYAWFKGLVKERRGMDDTQLEKVADGRVFTGRQ 232 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE---- 273 A + LID +G ++ L + ++D+ + + + LE Sbjct: 233 AIDLKLIDQIGDEKTAVTWLVEQKGVKKGLSVRDYKLQSRFGDLPFLKTAAAVTLEALGL 292 Query: 274 ----------DTIPLMKQTKVQGLWAVWNP 293 + + + G+ A+W P Sbjct: 293 GSIAHQIGQTGVAQAVDRFGMDGMLALWQP 322 >gi|192362443|ref|YP_001982749.1| signal peptide peptidase SppA, 67K type [Cellvibrio japonicus Ueda107] gi|190688608|gb|ACE86286.1| signal peptide peptidase SppA, 67K type [Cellvibrio japonicus Ueda107] Length = 635 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 136/264 (51%), Gaps = 11/264 (4%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATA 68 V++ S V V I G I+D S+ +++ + + +D+ A Sbjct: 323 VSVKRYLADVRSQVSPEPNLVGLITAVGGIQDGSQRPGSIGSESMLKLLRQAKENDNLKA 382 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETS 127 L++ + S GGSA+A E I I ++++ PV + +AAS GY I+ AS+ I A T+ Sbjct: 383 LVIRVDSGGGSAFASEIIRTEINALRDKGIPVFISMGSVAASGGYWIATASDEIWAQPTT 442 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIGV +P ++ L +G++ + ++ + S ++PK ++Q VD+ Y Sbjct: 443 ITGSIGVFGAFPTLEKTLGNMGITSDGIATTELAGSMSISRPLSPKMGDIVQQSVDNIYQ 502 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LV+E+R ++ ++ G +WTGA AK++GL+D +G E+ ++ ++ R Sbjct: 503 RFIHLVAETRQQTPEQIDAVAQGHVWTGARAKELGLVDNLGTLEDTIAAVAERAGLETYR 562 Query: 248 KIKDWNPPKNYWFCDLKNLSISSL 271 ++ PP + L++L+ +S Sbjct: 563 -VELVEPPLSPREELLRSLAENSA 585 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 28/234 (11%) Query: 51 QELIERIERISRDDSATALIVSLSSPG----GSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++LIE I++ + D + +++ PG G I +A++ K I Sbjct: 110 RDLIEAIQQAATDKRVSMIVIE---PGKLLGGGISKINEIGQALEAFKASGKKIIAASHY 166 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAE 163 + Y ++ ++ I + GS+ V Y K LDKLG++I + +S K Sbjct: 167 YSQDQYYLASFADDIYLHDM---GSVEVTGYGRYMAYYKTALDKLGITIHAFRSGKYKDF 223 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY----------DKTLVLSDGR 211 PF ++ ++ + +++ +H + + V ++RN+ D L + G Sbjct: 224 LEPFLRDNMSDESREHNSAWLNALWHSYTQQVEKARNLEPGSLNDFINNMDTYLKQTRGD 283 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + A + GL+D + +++ + L A V + K N + D+++ Sbjct: 284 --SAKLALEKGLVDKLLSRQD-MEQLLADTVGKKNSKGLYKNVSVKRYLADVRS 334 >gi|190150587|ref|YP_001969112.1| protease 4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263931|ref|ZP_07545535.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915718|gb|ACE61970.1| protease 4 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870796|gb|EFN02536.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 618 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q + + Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIQNG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEINEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++ +R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAHNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|196249953|ref|ZP_03148648.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. G11MC16] gi|196210467|gb|EDY05231.1| signal peptide peptidase SppA, 36K type [Geobacillus sp. G11MC16] Length = 335 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 137/293 (46%), Gaps = 21/293 (7%) Query: 20 LTVVYFSWSSHV-EDNSP--HVARIAIRGQIEDS--------------QELIERIERISR 62 L+++ S+S V ED P + + + G IED+ Q ++ I+++ Sbjct: 41 LSLMEDSFSEEVIEDGDPLKKIVVLEVNGVIEDTGEAETFFSSSFYNHQAFLKMIKQVKE 100 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNI 120 DDS A+++ ++SPGG + + K+K P+ + MAAS GY I+ A + Sbjct: 101 DDSVKAIVLRINSPGGGVVESAEVHNQLLKLKKETKKPIYVSMGAMAASGGYYIATAGDK 160 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A+ ++ GSIGV+ Q + K GV + ++KS P K +P ++ +++Q Sbjct: 161 LFASPETITGSIGVIMQSINYEGLAKKYGVELVTIKSGPYKDIMNPARKMTDAEQEILQR 220 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ SY FV ++ E R + + L+DGRI+ G +AK + LID G ++ +L Sbjct: 221 LINQSYEGFVDVIVEGRKLSEEAVRKLADGRIYDGRQAKALQLIDEFGYLDDTIAALKKE 280 Query: 241 GVDQSIRKIKDW--NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + +K P + + N + + I L+ + L ++ Sbjct: 281 HRLSGAQVVKYVSDTPWSSLFGVISNNAKPETEASELIRLLSRPSSPRLMYLF 333 >gi|262404348|ref|ZP_06080903.1| protease IV [Vibrio sp. RC586] gi|262349380|gb|EEY98518.1| protease IV [Vibrio sp. RC586] Length = 616 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 20/289 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 V Y+ + + ++ N + +A + G I D L + D + Sbjct: 306 AVSYYEYKASIQPNPLTDASDIAVVVASGAIMDGSQPRGTVGGDTLAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-VTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R++ ++ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRSMTVKAVDEIAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RKI---KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + P + + L + IS L+ + + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGEVRISLGLD--VSALLPKSLQPLATEWQ 591 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 101/277 (36%), Gaps = 43/277 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYIHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K+ Sbjct: 81 GSVFGEELPRENVLFDIVETLRYAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKS 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIAIKTLTPSMDEFV 259 Query: 208 SD-----GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G A +K+VGL+D + +++V Q+L Sbjct: 260 AQLKEAGGD--LAALSKQVGLVDELATRQQVRQALAE 294 >gi|262171018|ref|ZP_06038696.1| protease IV [Vibrio mimicus MB-451] gi|261892094|gb|EEY38080.1| protease IV [Vibrio mimicus MB-451] Length = 616 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + V+ + +A + G I D + + D + Sbjct: 306 AISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-VTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D + + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLD-VSALLPKSLQPLATEWQ 591 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + + A I + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPSVNKASALILNLSGPIVEQSTHINPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D++ T L+++L P + I +AI + K+ Sbjct: 81 GSVFGEELPRENVLFDIVDTLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKS 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-----LVL 207 + K+ PF +++ A + + + +V V+ +R I + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIDIKTLTPTMDEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A K+VGL+D + +++V Q+L Sbjct: 260 AQLKEVGGDLAALSKQVGLVDELATRQQVRQALAE 294 >gi|288553729|ref|YP_003425664.1| proteinase IV [Bacillus pseudofirmus OF4] gi|288544889|gb|ADC48772.1| proteinase IV [Bacillus pseudofirmus OF4] Length = 331 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 18/281 (6%) Query: 29 SHVEDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLS 74 +D + + + G I+D+ Q + +IE ++D S +I+ ++ Sbjct: 49 EQGDDFGNSIVVLELNGVIQDTGDAVSIFDAQGYRHQAFLSQIEHAAKDSSVQGVIIRVN 108 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +PGG I I +V+ KPV + MAAS GY I+ ++ IVA+ ++ GS+ Sbjct: 109 TPGGGVVESAEIHEKIVEVQEEYNKPVYISMGSMAASGGYYIAAPADKIVASPQTITGSL 168 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + + G+ ++KS K S E+ ++Q ++D SY FVR+ Sbjct: 169 GVIMESINIAELAENYGIKFNTIKSGEYKDIMSATREMTEGDRAILQSLIDESYDEFVRI 228 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIK- 250 +SE RN+ + L+DGRI+TG +A ++ L+D +G ++ + LG + S+ K + Sbjct: 229 ISEGRNMSESEVRQLADGRIYTGNQALEIDLVDELGSLDDTIAMMREDLGANYSVIKYEA 288 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 D + K LS ++ L L+ + + L ++ Sbjct: 289 DTGLYSLFSMTAAKMLSSNNELASIEQLITERRAPTLKYLY 329 >gi|15641996|ref|NP_231628.1| protease IV [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730094|ref|ZP_01682498.1| protease IV [Vibrio cholerae V52] gi|147673256|ref|YP_001217520.1| protease IV [Vibrio cholerae O395] gi|153217088|ref|ZP_01950852.1| protease IV [Vibrio cholerae 1587] gi|153820012|ref|ZP_01972679.1| protease IV [Vibrio cholerae NCTC 8457] gi|153823324|ref|ZP_01975991.1| protease IV [Vibrio cholerae B33] gi|227082121|ref|YP_002810672.1| protease IV [Vibrio cholerae M66-2] gi|229507917|ref|ZP_04397422.1| protease IV [Vibrio cholerae BX 330286] gi|229511848|ref|ZP_04401327.1| protease IV [Vibrio cholerae B33] gi|229518984|ref|ZP_04408427.1| protease IV [Vibrio cholerae RC9] gi|229607462|ref|YP_002878110.1| protease IV [Vibrio cholerae MJ-1236] gi|254849080|ref|ZP_05238430.1| protease IV [Vibrio cholerae MO10] gi|255745257|ref|ZP_05419206.1| protease IV [Vibrio cholera CIRS 101] gi|262155982|ref|ZP_06029102.1| protease IV [Vibrio cholerae INDRE 91/1] gi|262167944|ref|ZP_06035644.1| protease IV [Vibrio cholerae RC27] gi|298497974|ref|ZP_07007781.1| signal peptide peptidase SppA, 67K type [Vibrio cholerae MAK 757] gi|9656536|gb|AAF95142.1| protease IV [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121628165|gb|EAX60694.1| protease IV [Vibrio cholerae V52] gi|124113890|gb|EAY32710.1| protease IV [Vibrio cholerae 1587] gi|126509448|gb|EAZ72042.1| protease IV [Vibrio cholerae NCTC 8457] gi|126519158|gb|EAZ76381.1| protease IV [Vibrio cholerae B33] gi|146315139|gb|ABQ19678.1| protease IV [Vibrio cholerae O395] gi|227010009|gb|ACP06221.1| protease IV [Vibrio cholerae M66-2] gi|227013891|gb|ACP10101.1| protease IV [Vibrio cholerae O395] gi|229343673|gb|EEO08648.1| protease IV [Vibrio cholerae RC9] gi|229351813|gb|EEO16754.1| protease IV [Vibrio cholerae B33] gi|229355422|gb|EEO20343.1| protease IV [Vibrio cholerae BX 330286] gi|229370117|gb|ACQ60540.1| protease IV [Vibrio cholerae MJ-1236] gi|254844785|gb|EET23199.1| protease IV [Vibrio cholerae MO10] gi|255737087|gb|EET92483.1| protease IV [Vibrio cholera CIRS 101] gi|262023671|gb|EEY42372.1| protease IV [Vibrio cholerae RC27] gi|262030160|gb|EEY48804.1| protease IV [Vibrio cholerae INDRE 91/1] gi|297542307|gb|EFH78357.1| signal peptide peptidase SppA, 67K type [Vibrio cholerae MAK 757] Length = 616 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D L+ + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 85.6 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|172060050|ref|YP_001807702.1| peptidase S49 [Burkholderia ambifaria MC40-6] gi|171992567|gb|ACB63486.1| peptidase S49 [Burkholderia ambifaria MC40-6] Length = 330 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I +++++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSDDAKFASTGRHTALVTIDGEIAAGTNANAEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKYPNKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|39933145|ref|NP_945421.1| signal peptide peptidase SppA 36K type [Rhodopseudomonas palustris CGA009] gi|192288501|ref|YP_001989106.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris TIE-1] gi|39652770|emb|CAE25509.1| putative protease IV [Rhodopseudomonas palustris CGA009] gi|192282250|gb|ACE98630.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris TIE-1] Length = 326 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 90/275 (32%), Positives = 154/275 (56%), Gaps = 15/275 (5%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 ++ +ARI I G I + E ++ ++R+ + S +A+IV ++SPGG+ E + A+ + Sbjct: 49 TSTGSIARIKIEGLIRSNDERVQALDRLGK-SSYSAVIVHINSPGGTTAGSEELHDALAR 107 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 +K +KP++ V +AAS GY+ + AS IVA +TSLVGSIGVLFQYP V L +GV + Sbjct: 108 LKAKKPMVVVVEGLAASGGYIAALASEHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKV 167 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + VKSSP+KA P+ F +P+A ++ +V SY WF +V +SR + D+ V++DGR+ Sbjct: 168 EEVKSSPLKAAPNGFEPTSPEARAAIEALVKDSYAWFRGMVQQSRKMTDDQLNVVADGRV 227 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS----- 267 +TG +A + LID +G + L ++ ++D+ + + Sbjct: 228 FTGRQAVGLKLIDELGDERTAIAWLEKAKNVKAGLPVRDYKLAPQFGDLTFLRAAASVAF 287 Query: 268 -------ISSLLEDT--IPLMKQTKVQGLWAVWNP 293 I+ +E T + +++ + G+ A+W P Sbjct: 288 DAAGLGVIARRVEQTGAMQSVERLGLDGMLALWAP 322 >gi|293609877|ref|ZP_06692179.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828329|gb|EFF86692.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 338 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWS---SHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S S V +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTSKEGSAVSSSSAHLAVVDIIGTIDASSNQAVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K + P V + +M AS Sbjct: 104 NKALKRAFEASNSKAVALNINSPGGSPVQSDEIWQEIRYLKKQHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 TYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTNKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +P Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 DPVQKQHIQSVLDNVHTHFITAVKEGRGKRLKSNDPAIFSGLFWTGEQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L +D + + NP ++ +S + + + K+Q Sbjct: 284 ITSLMREL---NLDNKVDYTIERNPLQSILGRMGAQIGQGVSESIAQEVQTSQSAKLQ 338 >gi|300023831|ref|YP_003756442.1| signal peptide peptidase SppA, 36K type [Hyphomicrobium denitrificans ATCC 51888] gi|299525652|gb|ADJ24121.1| signal peptide peptidase SppA, 36K type [Hyphomicrobium denitrificans ATCC 51888] Length = 321 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 15/299 (5%) Query: 10 TRYVMLSLVTLTVVYFSWSSH---VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R L+ V + + + +ARI I G I + ++ ++ ++ I+ D S Sbjct: 20 WRAAGLAAVLIAIGALTLGGDKLATLAGEKQIARITIEGTISEDRDQLKMLKDIAEDSSV 79 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ ++SPGG+ GEA++ ++ + +KP++ + +AASA Y+ A++ IVA Sbjct: 80 AGVLMYVNSPGGTTTGGEALYEGLRALAAKKPIVAQFGTVAASAAYIAGIATDHIVARGN 139 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GS+GV+ Q+P LDK+GV + VKS +KA PSPF + Q+ Q +V+ + Sbjct: 140 SITGSVGVIVQWPEFVQLLDKVGVKVNEVKSGVLKASPSPFEPLTEGGKQVAQGMVNDGF 199 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 WFV LV R + L DGR+++G EA + L+D +GG+EE + L Sbjct: 200 KWFVGLVETRRGVKAADIPGLLDGRVFSGREALQAKLVDQIGGEEEAVKWLKDEKNVPQS 259 Query: 247 RKIKDWNP--PKNYWFCDLKNLSISSLLEDTIPLM----------KQTKVQGLWAVWNP 293 K+ DW P P +Y F + LL + + + GL ++W+P Sbjct: 260 AKLVDWKPSTPNSYGFAGMSGQIAGFLLGSSAGDLVNFLSRERSFSTLGLDGLLSLWHP 318 >gi|113476113|ref|YP_722174.1| signal peptide peptidase A [Trichodesmium erythraeum IMS101] gi|110167161|gb|ABG51701.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Trichodesmium erythraeum IMS101] Length = 272 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I ++++E ++ + AL++ + SPGG+ + I+ A++K Sbjct: 10 RKQIARIEINGVIASETRKQVLEALKTVEE-RKFPALLLRIDSPGGTVADSQEIYNALKK 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + I++ ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LQEKVKIVASFGNISASGGVYIGMGAQNIMSNPGTITGSIGVILRGNNIERLLEKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K VKS P K + E+ Q++QD++D SY FV+ V+E+RN+ + +DGRI Sbjct: 129 KVVKSGPYKDILAFDREMTAPEKQILQDLIDFSYQQFVQTVAEARNLAVETVKSFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 +TG +A ++G++D +G +E+ + L +D + PK + L N +SS Sbjct: 189 FTGQQALELGVVDRLGTEEDARKWACNLVDLDPEKTESFTLEKPKTFLNKVLNNNQVSSK 248 Query: 272 LEDT---IPLMKQTKVQGLWAVWNP 293 L + T LW ++ P Sbjct: 249 LSAAQSWVEFEVSTSGLPLW-LYRP 272 >gi|310767792|gb|ADP12742.1| protease 4 [Erwinia sp. Ejp617] Length = 618 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 22/272 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 + +VA I G I D +E I D A++ ++SPGGS A Sbjct: 322 GSSDGNVAVILANGAIMDGEEAPGSVGGDTTALEIRAARLDPKIKAIVFRVNSPGGSVTA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + K KPV+ + MAAS GY +S +N I+A+ +L GSIG+ V Sbjct: 382 SETIREELAAAKEAGKPVVVSMGGMAASGGYWVSTPANYIIASPNTLTGSIGIFGVINTV 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD +GV V +SP+ S + P+ QMMQ +D Y F+ LV++SRN Sbjct: 442 ESSLDAIGVHTDGVATSPLADVAS-TKALPPEVQQMMQLSIDKGYQNFIGLVAKSRNKTS 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ ++ G +WTG++AK GLID +G ++ L + P+ W+ Sbjct: 501 EEIDKIAQGHVWTGSDAKAKGLIDALGDFDDAVAKAAELAK---------LDKPQLSWYQ 551 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L +L + + + + P Sbjct: 552 GEPGLL--DMLFSQVDVSAHAALPATLKAYLP 581 Score = 85.6 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 103/281 (36%), Gaps = 44/281 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSW--SSHVEDNSPHVARIAIRGQIEDS-------- 50 + FV + + +++L +V ++F + + + G + D Sbjct: 19 LNFVREFVLNLFLILLIVVALGLWFQLHNAGTPAATQKGALVVNLSGAVVDKPSVSNKFS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 ++++ I + D + T +++ L GG + + I +A+ Sbjct: 79 KIGRQLLGASSGRLKENSLFDVVDAIRQAKDDTNITGMVLDLRHFAGGDQPSLQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KP+ + A Y ++ +N I + V G Y K +DKL Sbjct: 139 REFRDGGKPIFATGESYS-QAQYYLASFANKIYLSPQGNVDLHGFATNSLYYKTLIDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +S + K+ PF ++P+A V + ++ +++ +R I D+ Sbjct: 198 ISSHVFRVGTYKSAVEPFLRDNMSPEARDADGRWVGELWQNYLNMLAANRQITVDQVFPG 257 Query: 208 SDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + G + G + AK+ L+D + V L Sbjct: 258 AQG-VLNGLQKLGGDTAQYAKENKLVDELASSSRVEHELVK 297 >gi|258621243|ref|ZP_05716277.1| Protease IV [Vibrio mimicus VM573] gi|258586631|gb|EEW11346.1| Protease IV [Vibrio mimicus VM573] Length = 616 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + V+ + +A + G I D + + D + Sbjct: 306 AISYYEYKASVKPTLLNEANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q +++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-VTTGLTQGAKDAIQLGIENGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D + + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLD-VSALLPKSLQPLATEWQ 591 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 102/275 (37%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + + A I + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPMPSVNKASALILNLSGPIVEQSTHINPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D++ T L+++L P + I +AI + K+ Sbjct: 81 GSVFGEELPRENVLFDIVDTLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKS 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIAIKTLTPTMDEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A K+VGL+D + +++V Q+L Sbjct: 260 AQLKEVGGDLAALSKQVGLVDELATRQQVRQTLAE 294 >gi|317154743|ref|YP_004122791.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] gi|316944994|gb|ADU64045.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] Length = 300 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 65/233 (27%), Positives = 124/233 (53%), Gaps = 4/233 (1%) Query: 12 YVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 V + LV +F V + +++ G I DS E++E I + D S Sbjct: 24 LVAVVLVMGATAFFRSMGWTPHSVGMGGDRLGMVSVEGVILDSAEVVEWIRTLKDDTSIK 83 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGG+ + I++A+ + KPV+ +AAS GY S +++IVA S Sbjct: 84 GVLLRVNSPGGAIAPSQEIYQAVSALAEVKPVVASYGTVAASGGYYASAPAHVIVANPGS 143 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + SIGV+ ++ V L+KLG+ + + + KA +P E+ P+ + + D++ + Sbjct: 144 ITASIGVMAEFVTVTEALEKLGIKPEVLTTGKYKAAGTPMRELTPEQREQLLDLMRDLHD 203 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 FV V+ +R +P+ + ++DGR TG +A ++GL+D++G + + + L A+ Sbjct: 204 QFVGDVARARKMPFARVAAVADGRGVTGRQALELGLVDMLGSESQAFDKLKAM 256 >gi|305665196|ref|YP_003861483.1| putative protease IV [Maribacter sp. HTCC2170] gi|88709948|gb|EAR02180.1| putative protease IV [Maribacter sp. HTCC2170] Length = 586 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 127/254 (50%), Gaps = 10/254 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 S + VA + +G+I + + + + DD A+++ + SP Sbjct: 291 SNKKSLNKGDDKVAVVFAQGEILYGEGGPDIIGQGIISRALVKARDDDRVKAIVLRVDSP 350 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA + I+R ++ K +KPV+ + +AAS GY I+ ++ I A T++ GSIGV Sbjct: 351 GGSALTSDIIWREVELAKAKKPVVVSMGNVAASGGYYIAAGADKIFAEPTTITGSIGVFG 410 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P V +G++ + V ++ + S F + +++Q+ ++ +Y F+ VS+ Sbjct: 411 TIPNVNELAADIGINAEQVGTNKNSVDYSLFEPMTENFRKVVQEGIEETYETFLDRVSKG 470 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W+G +AKK+GLID +G ++ + L +S IK + K Sbjct: 471 RNISIAEADSMAQGRVWSGVDAKKLGLIDELGNMDDAIAAAAQLAEIESY-GIKKYPKYK 529 Query: 257 NYWFCDLKNLSISS 270 + ++++S + Sbjct: 530 TGFEKFMEDMSGAK 543 Score = 79.8 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 7/198 (3%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 GQ + E++ I+ D + +S + +AI +A++ K I Sbjct: 72 GQAQGLDEVLHAIKVAKDDSDIKGISISNNFIMAGLAQTQAIRKALKDFKESGKFIYTYS 131 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + Y ++ S+ I + G+ + + K DK GV ++ ++ K+ Sbjct: 132 DFYMQKDYYLASVSDSIFLNPVGGLDFKGLSTEVLFYKDLQDKTGVKMEVIRHGKYKSAV 191 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAK 219 PF +E++ +++++ S + V +SE RN+ + +++D GR A Sbjct: 192 EPFLANEMSDANRTQIKELISSLWDTMVADISEGRNLSVENVNIIADTLGGR--LPKYAV 249 Query: 220 KVGLIDVVGGQEEVWQSL 237 GLID V +E L Sbjct: 250 ASGLIDGVVFFDEYEAKL 267 >gi|171463178|ref|YP_001797291.1| peptidase S49 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192716|gb|ACB43677.1| peptidase S49 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 313 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 16/281 (5%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW--SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 K + +L +V++ + F + H A + + G+I S ++ + Sbjct: 32 KAVLRVLTLLVIVSVLLSIFDFHLPGKGMGVEKHTALVTLEGEISSSSMANAMDINSSLL 91 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 ++ + +++ ++SPGG I I +++ KP V ++ AS GY ++ Sbjct: 92 SAFENEHSVGVVLRINSPGGFPVQAGMINDEIHRLRKLYPSKPFYVVVEDICASGGYYVA 151 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 AS+ I+ + SLVGSIGV+ + +DKLGV+ + + S K PFS+ NPK V Sbjct: 152 VASDQILVDKASLVGSIGVIMEGFGFTGLMDKLGVTRRMITSGSNKGMLDPFSKENPKQV 211 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +M++ ++D + F+ +V E R L GRIW G +A K+GL D G + V + Sbjct: 212 EMVKTMIDEIHQQFIAVVKEGRGDRLKDMPDLFSGRIWNGEQAVKIGLADGYGTVDTVAR 271 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + I D+ +N+ K + + Sbjct: 272 DIL------KAPDILDYTMKENFAERVAKRFGAEAAAGKAL 306 >gi|115351045|ref|YP_772884.1| peptidase S49 [Burkholderia ambifaria AMMD] gi|115281033|gb|ABI86550.1| peptidase S49 [Burkholderia ambifaria AMMD] Length = 330 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 11/244 (4%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L L+ ++ FS + H A + I G+I + +++ ++ Sbjct: 44 KIFFRFAFLGVFLLLAFALIDFSNDAKFASTGRHTALVTIDGEIAAGTNANGEDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD A +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGAAGVVLRINSPGGSPVQAGMVYDEIRRLRTKYPNKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL + KLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMGKLGVDRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q ++D + F++ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 224 AHAQALLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFWTGEKSVELGLADGYGTTDTVAR 283 Query: 236 SLYA 239 + Sbjct: 284 DVLK 287 >gi|52425162|ref|YP_088299.1| SppA protein [Mannheimia succiniciproducens MBEL55E] gi|52307214|gb|AAU37714.1| SppA protein [Mannheimia succiniciproducens MBEL55E] Length = 608 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 12/257 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGG 78 SS +A I I G I D + + + + + +D + A+++ ++SPGG Sbjct: 301 SSDFVQAKNKIAVINIEGTIVDGETNEQGVGGDSIAQLLRKAYKDKNVKAVVLRVNSPGG 360 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SA+A E I + + ++ KPV+ + MAAS GY IS ++ IVA + +L GSIG+ Sbjct: 361 SAFASEVIRQEAENLQTAGKPVVVSMGAMAASGGYWISSTADYIVADKNTLTGSIGIFAV 420 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P ++ + K G+S V +S + PS FS + + +Q ++ Y F+ +VS+ R Sbjct: 421 LPTLENTIKKAGISADGVTTSAL-VSPSGFSPLTAELKDSLQLQIEHGYERFLSVVSKGR 479 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ + ++ GR+W G +A K+ L+D +G + + L + + + + + Sbjct: 480 SLTKQQVDNVAQGRVWLGEDAYKMKLVDELGDFDTAVRKAQELA-NGKLAESEKTDTFSV 538 Query: 258 YWFCDLKNLSISSLLED 274 W D + L+++ Sbjct: 539 EWITDENTGLLGGLMKN 555 Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 88/228 (38%), Gaps = 35/228 (15%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQE-------------- 52 V L V L S ++ V++ + + G + D +E Sbjct: 3 IVFLFFVLLLAAIVSLTTMVKEKPNLTGDQGALLVNLNGYLADEREDGLNWRNALKKLND 62 Query: 53 -----------LIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKV-KNRKPV 99 ++ IE + D+ L++ L+ GG A + + +AI+ K+ K V Sbjct: 63 EQVASQYSTFDVVYAIENAANDERIKGLVLDLNYLDGGDLPALDYVGKAIRDFQKSGKKV 122 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 I + S Y ++ ++ I VG G+ Q Y K L+KL ++ + Sbjct: 123 IAYADNYSQS-QYFLASYADEIYLNPIGEVGIEGLSAQNLYFKSMLEKLEITPHVFRVGT 181 Query: 160 MKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+ P +++P+A + + + + + ++E+RNI + L Sbjct: 182 YKSAVEPLLRDDMSPEAKANTEQWLGTMWSNYQERIAENRNIAKNSVL 229 >gi|303250651|ref|ZP_07336848.1| protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252900|ref|ZP_07534789.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650639|gb|EFL80798.1| protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859689|gb|EFM91713.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 618 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q + + Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIQNG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVTELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEISEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGTYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|149910099|ref|ZP_01898746.1| putative protease IV [Moritella sp. PE36] gi|149806824|gb|EDM66786.1| putative protease IV [Moritella sp. PE36] Length = 620 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 16/293 (5%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIER 59 + L + L F + P V I GQI D + L + + + Sbjct: 304 FAKIEFLDYLALQSTQFEQQGFA--SKPGVGIIFANGQILDGNQPPGAIGGKSLTKLLLQ 361 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCAS 118 D+ AL++ + SPGGSA+A E I A+ ++K KPVI + +AAS GY I+ A+ Sbjct: 362 AKDDEQIKALVLRIDSPGGSAFASEQIRTALLELKKSGKPVIVSMGSVAASGGYWIASAA 421 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I A T++ GSIG+ + + L K+G+ V ++ S E+ Q++ Sbjct: 422 DEIWAKPTTITGSIGIFGLFATTEKLLAKMGIYSDGVGTTDFTG-LSVNRELPEHMAQII 480 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q V++ Y F+ +V+E R + ++ ++ GR+WTG +A +GLID +G ++ S Sbjct: 481 QMTVENGYSNFLTVVAEGRGMTTEEVDKIAQGRVWTGRDALNLGLIDNLGNLDDAIASAA 540 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 A VD S + P++ L + S ++ L G A W Sbjct: 541 A-KVDVSTDSLILIQTPRSERDRLLSIFTQSVAMQVLSEL--NISPNGNVATW 590 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 86/207 (41%), Gaps = 29/207 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 +++ I DD+ +ALI+ L+ P S I A+ + K KP+ + + Sbjct: 97 DVVNVIISAKSDDAISALILDLAQLKPA-SLTKLTDIADALVEFKKSNKPIYAY-GDYFS 154 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ ++ I+ GVL Q Y K +DKL +S + K+ Sbjct: 155 QEQYLLASFADEILLNPAG-----GVLLQGYGSYSLYFKDAIDKLNLSSHVFRVGTYKSF 209 Query: 164 PSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-------- 213 PF+ +++ ++ + + ++ + + +V+ +R I D +D ++ Sbjct: 210 VEPFTRSDMSAESKEAKLNWLNQLWDTYTSIVANNRLINADDVAPKAD--VFIKQLQSVN 267 Query: 214 --TGAEAKKVGLIDVVGGQEEVWQSLY 238 A K L+D + +E++ + L Sbjct: 268 GNIAQYALKQKLVDKLLTREQITEYLA 294 >gi|259908290|ref|YP_002648646.1| protease 4 [Erwinia pyrifoliae Ep1/96] gi|224963912|emb|CAX55416.1| Protease IV [Erwinia pyrifoliae Ep1/96] gi|283478224|emb|CAY74140.1| protease IV [Erwinia pyrifoliae DSM 12163] Length = 618 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 22/272 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 + +VA I G I D +E I D A++ ++SPGGS A Sbjct: 322 GSSDGNVAVILANGAIMDGEEAPGSVGADTTALEIRAARLDPKIKAIVFRVNSPGGSVTA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + K KPV+ + MAAS GY +S +N I+A+ +L GSIG+ V Sbjct: 382 SETIREELAAAKEAGKPVVVSMGGMAASGGYWVSTPANYIIASPNTLTGSIGIFGVINTV 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD +GV V +SP+ S + P+ QMMQ +D Y F+ LV++SRN Sbjct: 442 ESSLDAIGVHTDGVATSPLADVAS-TKALPPEVQQMMQLSIDKGYQNFIGLVAKSRNKTS 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ ++ G +WTG++AK GLID +G ++ L + P+ W+ Sbjct: 501 EEIDKIAQGHVWTGSDAKAKGLIDALGDFDDAVAKAAELAK---------LDKPQLSWYQ 551 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L +L + + + + P Sbjct: 552 GEPGLL--DMLFSQVDVSAHAALPATLKAYLP 581 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 102/281 (36%), Gaps = 44/281 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSW--SSHVEDNSPHVARIAIRGQIEDS-------- 50 + FV + + +++L +V ++F + + + G + D Sbjct: 19 LNFVREFVLNLFLILLIVVALGLWFQLHNAGTPAATQKGALVVNLSGAVVDKPSVSNKFS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 ++++ I + D + T +++ L GG + + I +A+ Sbjct: 79 KIGRQLLGASSGRLKENSLFDVVDAIRQAKDDTNITGMVLDLRHFAGGDQPSLQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KP+ + A Y ++ +N I + V G Y K +DKL Sbjct: 139 REFRDGGKPIFATGESYS-QAQYYLASFANKIYLSPQGNVDLHGFATNRLYYKTLIDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +S + K+ PF ++P+A V + ++ +++ +R I + Sbjct: 198 ISSHVFRVGTYKSAVEPFLRDSMSPEARDADGRWVGELWQNYLNMLAANRQITVVQVFPG 257 Query: 208 SDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + G + G + AK+ L+D + V L Sbjct: 258 AQG-VLNGLQKLGGDTAQYAKENKLVDELASSSRVEHELVK 297 >gi|209883626|ref|YP_002287483.1| protease IV [Oligotropha carboxidovorans OM5] gi|209871822|gb|ACI91618.1| protease IV [Oligotropha carboxidovorans OM5] Length = 326 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 159/307 (51%), Gaps = 16/307 (5%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F + I V+ +++ LT + S +AR+ I G I + E + +ER+ Sbjct: 18 LTFW-RAISALVVIAAVIGLTAALAPSARQAITGSEAIARVKIEGLIRSNDERVAALERL 76 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + A A+IV ++SPGG+ E +F A+ ++K +KP++ V +AAS GY+ + AS+ Sbjct: 77 GK-SKAAAVIVHINSPGGTTAGAEQLFDALTRLKAKKPLVVVVEGLAASGGYIAALASDH 135 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A +TSLVGSIGVLFQ+P L +GV ++ VKS+P+KA P+ + +P+A + Sbjct: 136 IIAQQTSLVGSIGVLFQFPNFSELLKTVGVKVEEVKSAPLKAAPNGYEPTSPEARAALDA 195 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V S+ WF LV R + V+SDGR++TG +A + LID +G ++ + L A Sbjct: 196 LVKDSFAWFKGLVKTRRQMDEAALQVVSDGRVFTGRQAVGLKLIDELGDEKTAVKWLQAQ 255 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE--------------DTIPLMKQTKVQG 286 + ++D+ + + + L + ++ +++G Sbjct: 256 NKIKGELPVRDYKLSPRFSDMTFLRTATEATLRALGLETFARIVGGSGVGGVAERLELEG 315 Query: 287 LWAVWNP 293 + A+W P Sbjct: 316 MLALWQP 322 >gi|292488447|ref|YP_003531329.1| protease IV [Erwinia amylovora CFBP1430] gi|292899636|ref|YP_003539005.1| protease IV [Erwinia amylovora ATCC 49946] gi|291199484|emb|CBJ46601.1| protease IV [Erwinia amylovora ATCC 49946] gi|291553876|emb|CBA20921.1| protease IV [Erwinia amylovora CFBP1430] gi|312172589|emb|CBX80845.1| protease IV [Erwinia amylovora ATCC BAA-2158] Length = 617 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 22/279 (7%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSS 75 + + + +VA I G I D +E +I D A++ ++S Sbjct: 314 YDYQVKDSSSDGNVAVILASGAIADGEETPGSVGGDTTALQIRAARLDPKIKAIVFRVNS 373 Query: 76 PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGGS A E I + K+ KPV+ + MAAS GY +S ++ I+A+ +L GSIG+ Sbjct: 374 PGGSVTASETIREELAAAKDAGKPVVVSMGGMAASGGYWVSTPADYIIASPNTLTGSIGI 433 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 V+ L+ +GV V +SP+ S + + QM Q +D Y F+ LV+ Sbjct: 434 FSVINTVENSLEAIGVHTDGVSTSPLADVAS-TRALPAEVQQMTQLSIDKGYQNFIDLVA 492 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +SR+ + ++ G +WTG++AK GLID +G ++ L + Sbjct: 493 KSRHKTPGEIDQIAQGHVWTGSDAKANGLIDALGDFDDAVTKAAELAK---------LHT 543 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P+ W+ D L +L + + + + P Sbjct: 544 PQLSWYHDEPGLL--DMLVSQVEVAAHAALPATLKAYLP 580 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 103/280 (36%), Gaps = 42/280 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSW--SSHVEDNSPHVARIAIRGQIEDS-------- 50 + FV + + +++L +V ++F +S + + G + D Sbjct: 19 LNFVREFVLNLFLILLIVVALGLWFQLHNASTPAATQKGALVVNLSGVVVDKPSVSNKFS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L + G+ + I +A+ Sbjct: 79 KIGRQLLGASSDRLKENSLFDVVDAIRQAKDDANITGVVLDLRNFAGADQPSLQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KP+ + A Y ++ +N I + V G Y K +DKL Sbjct: 139 REFRDGGKPIFASGESYS-QAQYYLASFANKIYLSPLGNVDLHGFATHSLYYKTLIDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 VS + K+ PF ++P+A + + ++ ++ +R I D+ Sbjct: 198 VSSHVFRVGTYKSAVEPFLRDSMSPEARDADGRWIGKLWQNYLNTLAANRQITADQVFPG 257 Query: 208 SDGRI-----W---TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G + + T AK+ L+D + V L Sbjct: 258 AQGMLNGLQKFGGDTAQYAKENKLVDELASASRVEHELAK 297 >gi|320156922|ref|YP_004189301.1| protease IV [Vibrio vulnificus MO6-24/O] gi|319932234|gb|ADV87098.1| protease IV [Vibrio vulnificus MO6-24/O] Length = 616 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 18/270 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE---------LIERIERISRDDSAT 67 + Y+ + + + DN + +A + G I D Q+ + + + DD Sbjct: 306 AISYYDYRATMRDNFDVNADDIAIVVASGTIMDGQQPRGTVGGDTVAGLLRQARNDDKVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I +Q +K+ KP++ + +AAS GY IS +++ I+A T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEVQALKDAGKPIVVSMSSLAASGGYWISMSADKIIAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + +KLG+ V +SP E + ++ A Q Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGFNKLGIYTDGVGTSPFSGEG-ISTGLSKGASQAFQMGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LVS++R++ D ++ GR+WTG +A + GL+D +G ++ + ++ Sbjct: 485 QRFISLVSDNRDLSLDAVDKVAQGRVWTGYDALQHGLVDQIGDFDDAVAEAAKMAQLENY 544 Query: 247 RKI---KDWNPPKNYWFCDLKNLSISSLLE 273 + +P + + +K + IS ++ Sbjct: 545 NLYWVEEPLSPTEQFIQEFMKQVKISMGVD 574 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 108/297 (36%), Gaps = 52/297 (17%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIEDSQ---------- 51 FV + +LS+ + VYF + + P + + G I + Sbjct: 21 FVRLALTNLIFLLSVALVYFVYFYGHDTQPQVEQPSALVLNLSGPIVEQSLYINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D+ T L++SL P + I +A+ + K Sbjct: 81 SSLFGEEIPKENVLFDVVDTIRYAKDDEKITGLVLSLRDMPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KP+ S Y ++ ++ I A GV+ + Y K L+KL Sbjct: 141 SGKPIYAIGAFYNQS-QYYLASYADKIYLAPDG-----GVMLKGYSAFNLYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--- 204 V+ + K+ PF +++P A + + + FV V+ +RNI Sbjct: 195 VTTHVFRVGTYKSAIEPFVRDDMSPAAKESATRWLTQLWGAFVDDVANNRNIDPKTLNPS 254 Query: 205 --LVLSDGRIWTGAEA---KKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWN 253 LS + G A K+GL+D + ++++ L + D S + I ++ Sbjct: 255 MEEFLSQLKSVNGDLAALSIKLGLVDELATRQQLRAQLAEKFGASGDDSYKAISYYD 311 >gi|55981463|ref|YP_144760.1| putative protease [Thermus thermophilus HB8] gi|55772876|dbj|BAD71317.1| putative protease [Thermus thermophilus HB8] Length = 301 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 143/292 (48%), Gaps = 17/292 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVED---------NSPHVARIAIRGQIEDS---QELIERIER 59 ++ ++L+ + + + S + V + + G+I + + ++ + Sbjct: 12 FLGVALLVVGLGRLTASPPAQGPWRETTLYGQGEKVLLLELLGEIPSGKALERFLSQVRQ 71 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 D+ A+++ + SPGG EA+ RA++ + KP++ + +AAS GY ++ A+ Sbjct: 72 AREDEGVRAVVLYVESPGGGVTETEALHRALRALAQEKPLVASLGRVAASGGYYVATAAR 131 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I+ T++ GSIGV+ P V L K+GV ++ +K +K SP + P+ +++Q Sbjct: 132 EILVPPTAVTGSIGVVGYLPQVGELLAKVGVRVEVLKEGRLKDMASPLRPLTPEEREVVQ 191 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ +Y FV+ V+E R +P +K L L+DGRI++G +A +GL D G E+ + Sbjct: 192 GLLREAYELFVQRVAEGRGMPREKVLALADGRIYSGKQAVALGLADREGYLEDAARRAAE 251 Query: 240 LGVDQSIRKIKDWNPP---KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 L ++ R ++ P + W ++ LL+ + + GLW Sbjct: 252 LAGLKAFRLVRYTRPKGLLEGLWGEEVP--WAQGLLQARFRVEYRYLGGGLW 301 >gi|332707294|ref|ZP_08427347.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] gi|332354028|gb|EGJ33515.1| serine peptidase, MEROPS family S49 [Lyngbya majuscula 3L] Length = 274 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 10/266 (3%) Query: 36 PHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI I G I + ++E ++ + L++ + SPGG+ + I+ A+ ++ Sbjct: 11 KQIARIEITGAIAGGTRKRVLEALKTVEE-KKFPVLLLRIDSPGGTVGDSQEIYSALVRL 69 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + + ++ ++AS G I + IVA ++ GSIGV+ + ++ LDK+GVS K Sbjct: 70 REKVKIVASFGNISASGGVYIGMGAEHIVANPGTITGSIGVILRGNNIERLLDKIGVSFK 129 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K + E+ ++Q+++D+SY FV+ V++SRN+ D +DGRI+ Sbjct: 130 VIKSGPYKDILAFDRELTEPEKTILQELIDTSYQQFVQTVAQSRNLDVDVVKSFADGRIF 189 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 TG +A +G++D +G +E+ L G+D K PK L I + Sbjct: 190 TGEQAHNLGVVDRLGTEEDARCWAAELVGLDPEKTKSFTIEEPKPLLSRLLPGNRIRNRS 249 Query: 273 E-----DTIPLMKQTKVQGLWAVWNP 293 + D + T Q LW ++ P Sbjct: 250 QISVGIDWLEFELSTSGQPLW-LYRP 274 >gi|298492790|ref|YP_003722967.1| signal peptide peptidase SppA ['Nostoc azollae' 0708] gi|298234708|gb|ADI65844.1| signal peptide peptidase SppA, 67K type ['Nostoc azollae' 0708] Length = 611 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 9/229 (3%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ +A + G+I D + +I +D ++++ ++SPGGSA Sbjct: 314 NSENKIAVVYAEGEIVDGKGEDGEIGGDRFAKIFNKIRQDQDVKSVVLRINSPGGSATVS 373 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R I+ + KPVI + ++AAS GY I+ SN I A ++ GSIGV + Sbjct: 374 EIIQREIKLTRQAKPVIVSMGDVAASGGYWIASDSNRIFAETNTITGSIGVFGLLLNGQK 433 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 G++ +VK++ + +P+ + + Q V+ Y+ F+ V++ R +P K Sbjct: 434 LAKNNGITWDTVKTAQYADNQTVSRPKSPQELALYQRSVNRIYNMFINKVAQGRKLPQQK 493 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 ++ GR+W+G AK++GL+D +GG + +++++ Sbjct: 494 VAEIAQGRVWSGVAAKEIGLVDEIGGLNVAIEYAAKQAKLGKNWELEEY 542 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 15/273 (5%) Query: 21 TVVYFSWSSHVEDNSPHVA------RIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 +++ F S + D+ P + I + +++IE +E+ RD + + + Sbjct: 51 SILVFDLSMKITDSQPSSSDFLKKTLIGVNEDQITLRKVIETLEKAQRDPRIVGIYIDAT 110 Query: 75 SPG---GSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 G G YA + I + + K + K +I + Y +S +N IV L+ Sbjct: 111 KSGAASGLGYASLKEIRQGLDKFRASGKKIIAYSTDWNERE-YYLSSVANNIVLNPVGLM 169 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYH 187 G+ Q ++ L K GV I+ V+ K PF +++P+ Q Q ++D + Sbjct: 170 EINGLSSQPVFLAGALQKYGVGIQVVRVGKFKGAVEPFILDKLSPENRQQTQKLLDDVWG 229 Query: 188 WFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + V +SR I K ++D + I +K GL+D V Q++V L L Sbjct: 230 EWRTSVGKSRKIQPQKLQAIADSQPILEANTSKTNGLVDQVAYQDQVVADLKKLTASDKD 289 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 K +Y K++ + E+ I ++ Sbjct: 290 DKSFRQIHLSDYAEVPGKSMGVERNSENKIAVV 322 >gi|260583283|ref|ZP_05851058.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae NT127] gi|260093643|gb|EEW77556.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae NT127] Length = 615 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+++ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGAIIDGESDDENSGGDTIARILRKAHDDNSVKAVVLRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A E ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADENTITGSIGIFAMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GVS V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVSSDGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + I+D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAIQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 90.6 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 59/297 (19%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V +SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIIGFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI + K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY------PYVKPFLDK 147 N KPVI + Y ++ ++ I SIG + + Y K LDK Sbjct: 135 NAGKPVIAYADNY-SQGQYYLASFADEIYLN------SIGKVDIHGLSQENLYFKEMLDK 187 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 L V+ + K+ PF ++++ +A MQ + ++ +V VSE+R I D L Sbjct: 188 LAVTPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRKIKKDNVL 247 Query: 206 VLSDGRIWTGAEAKK---------VGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + +A K GL+ DVV ++ +L+ G D I+ Sbjct: 248 PNAK-QYLSDLKALKGNSTAYAQQRGLVTDVVTRLDLDKKLTALFGKGSDGKANLIE 303 >gi|326424138|ref|NP_761927.2| signal peptide peptidase SppA, 67K type [Vibrio vulnificus CMCP6] gi|319999523|gb|AAO11454.2| signal peptide peptidase SppA, 67K type [Vibrio vulnificus CMCP6] Length = 616 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 133/270 (49%), Gaps = 18/270 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE---------LIERIERISRDDSAT 67 + Y+ + + + DN + +A + G I D Q+ + + + DD Sbjct: 306 AISYYDYRATMHDNFDVNADDIAVVVASGTIMDGQQPRGTVGGDTVAGLLRQARNDDKVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I +Q +K+ KP++ + +AAS GY IS +++ I+A T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEVQALKDAGKPIVVSMSSLAASGGYWISMSADKIIAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + +KLG+ V +SP E + ++ A Q Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGFNKLGIYTDGVGTSPFSGEG-ISTGLSKGASQAFQMGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV ++R++ D ++ GR+WTG +A + GL+D +G ++ + ++ Sbjct: 485 QRFISLVGDNRDLSLDAVDKVAQGRVWTGYDALQHGLVDQIGDFDDAVAEAAKMAQLENY 544 Query: 247 RKI---KDWNPPKNYWFCDLKNLSISSLLE 273 + +P + + +K + IS ++ Sbjct: 545 NLYWVEEPLSPTEQFIQEFMKQVKISMGVD 574 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 108/297 (36%), Gaps = 52/297 (17%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIEDSQ---------- 51 FV + +LS+ + VYF + + P + + G I + Sbjct: 21 FVRLALTNLIFLLSVALVYFVYFYGHDTQPQVEQPSALVLNLSGPIVEQSLYINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D+ T L++SL P + I +A+ + K Sbjct: 81 SSLFGEEIPKENVLFDVVDTIRYAKDDEKITGLVLSLRDMPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KP+ S Y ++ ++ I A GV+ + Y K L+KL Sbjct: 141 SGKPIYAVGAFYNQS-QYYLASYADKIYLAPDG-----GVMLKGYSAFNLYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--- 204 V+ + K+ PF +++P A + + + FV V+ +RNI Sbjct: 195 VTTHVFRVGTYKSAIEPFVRDDMSPAAKESATRWLTQLWGAFVDDVANNRNIDPKTLNPS 254 Query: 205 --LVLSDGRIWTGAEA---KKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWN 253 LS + G A K+GL+D + ++++ L + D S + I ++ Sbjct: 255 MEEFLSQLKSVNGDLAALSIKLGLVDELATRQQLRAQLAEKFGASGDDSYKAISYYD 311 >gi|218245954|ref|YP_002371325.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8801] gi|257059002|ref|YP_003136890.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8802] gi|218166432|gb|ACK65169.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8801] gi|256589168|gb|ACV00055.1| signal peptide peptidase SppA, 67K type [Cyanothece sp. PCC 8802] Length = 598 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 9/233 (3%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +S +A + + G I D + +I +D++ A+++ ++SPGGSA A Sbjct: 307 SSSQKIAVVYLEGAIVDGLGTLQQVGGSRFANLLRQIRQDETIKAVVIRINSPGGSATAS 366 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I R IQ + KPVI + +AAS GY ++ I A ++ GSIGV + + Sbjct: 367 DIILREIQLTQAEKPVIISMGNVAASGGYWVATGGQHIFAQANTVTGSIGVFGLFLNINE 426 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + G+S +VK++ + P+ + + Q V+ Y F+ V++SR + K Sbjct: 427 IANNNGLSWDTVKTANFGDLGTATRPKTPQELAIYQGFVNQVYDLFLERVAKSRQLSKTK 486 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ GRIW+G +AK +GL+D +GG + ++ ++ + Sbjct: 487 VNEIAQGRIWSGEDAKTIGLVDSIGGLNAAINYAAQQAKLGTDWQLDEYPQRR 539 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 138/317 (43%), Gaps = 31/317 (9%) Query: 3 FVLKKIKTRYVMLSLVTL------------TVVYFSWSSHVEDNSPHVARIAI----RGQ 46 F+ I +++ L++L +V+ F S+ V+D P + + Sbjct: 18 FLFMTIGVSGLVILLISLASLNTSPTIKDKSVLVFDLSTQVQDTEPPLTLSDVFSDEDQS 77 Query: 47 IEDSQELIERIERISRDDSATALIVSLSSP-GGSAYAGE-AIFRAIQKVKNR-KPVITEV 103 + +++++ IE+ ++DD A+ + S+ GGS Y I A+ + + K +I Sbjct: 78 VLTLRQVLQGIEKATKDDRIQAIFLDGSTASGGSGYGTFSEIREALAQFREAGKKIIVY- 136 Query: 104 HEMAASAG-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ++ S Y +S ++ ++ + G+ + + DK G+ +++V+ K Sbjct: 137 -DVTLSEQEYYLSALADTVILNPMGQMELKGLAIEPLFWSGTFDKYGIGVQTVRVGSFKG 195 Query: 163 EPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--DGRIWTGAEA 218 PF+ +++P+ Q +Q ++D + F+ V ++R + L+ G I T +A Sbjct: 196 AIEPFTRKDLSPENRQQLQALLDDLWSNFLVTVGKNREVSPQILQRLANNQG-ILTAQQA 254 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI---SSLLEDT 275 +VGL+D VG Q++ L L + + K + + ++ L + SS + Sbjct: 255 LEVGLVDEVGYQDQAIAKLKELTGTTNSTE-KSFPQVTLGTYLNVPVLQVPERSSSQKIA 313 Query: 276 IPLMKQTKVQGLWAVWN 292 + ++ V GL + Sbjct: 314 VVYLEGAIVDGLGTLQQ 330 >gi|307246184|ref|ZP_07528266.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255165|ref|ZP_07536983.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259602|ref|ZP_07541327.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853119|gb|EFM85342.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862038|gb|EFM94014.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866538|gb|EFM98401.1| Protease 4 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 618 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ YF ++ + D +A + + GQI S +++ + + DD+ Sbjct: 304 SIDYFDYAMELNDRFNVQAEHKIAVVNVEGQIISGESDASSAGSDTIVKLLRKAREDDNV 363 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGGSA A E I + ++++ K KPV+ + MAAS GY IS S+ I+A+ Sbjct: 364 RGVILRVNSPGGSALASEIIRQEVEEIQKAGKPVVASMGGMAASGGYWISATSDKIIASP 423 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIG+ + LGV+ + SP A SP + + +++Q ++S Sbjct: 424 TTITGSIGIFGLATSFEKTAKNLGVTEDGISLSPF-ASSSPLKTLPKEQAEVIQISIESG 482 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQ 244 Y F+ LVS RN+ ++ G++W+G +A K GL+D +G + ++ L + Sbjct: 483 YDRFLELVSRGRNMSKQAVDKIAQGQVWSGEDALKHGLVDELGDFTAAYSAVIELVNQRR 542 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ W D + SLL+ Sbjct: 543 KANNEAEIEHFRSQWMIDSDDSLFGSLLK 571 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 42/242 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARI-------AIRGQIED---- 49 + + I+ + L + +V F++ + + ++ H I + G + D Sbjct: 11 IFRCIREFVMSLFFIIFVLVCFAFLALINQESGSTKHTNFIEKGALTLNLDGYLADNHDK 70 Query: 50 ---------------------SQELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIF 87 + +++ I + ++D+ T L++ L+ GG + + I Sbjct: 71 YGDLHRLVQAELGNHEPIKISTFDVVRAIAKAAKDERITGLVLDLAYFQGGDSASLHFIG 130 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYPYVKPFL 145 I + K KPVI V E + Y ++ ++ I + V I L Y K L Sbjct: 131 NEISEFKKSGKPVIA-VGEQYSQPQYYLASFADKIYLNKAGFV-DIHALSHSNVYFKTLL 188 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DK+ + K+ PF +++ +A Q Q + S +H + ++++R IP ++ Sbjct: 189 DKIEAEPHIFRVGAYKSAVEPFIRDDMSAEAKQNAQTWLTSIWHNIRQDIAQNRKIPAEQ 248 Query: 204 TL 205 L Sbjct: 249 VL 250 >gi|261867920|ref|YP_003255842.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413252|gb|ACX82623.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D11S-1] Length = 626 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 12/254 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 D +A + + G I D + + + + D A+++ ++SPGGSA+A Sbjct: 322 GDTKNKIAVVNVEGAIIDGETDEENVGGDTIANLLRKAYDDKDVKAVVLRVNSPGGSAFA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + ++ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P Sbjct: 382 SEIIRQELSHLQQAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTF 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + K+GVS VK+S + A S F ++ + ++Q ++ Y F+ VS+ R++ Sbjct: 442 EKTIKKIGVSADGVKTSDL-ALGSAFLPLSSELNDVLQLEIEHGYDEFLTKVSQGRHLSK 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN-YWF 260 + ++ G++W G+EA + L+D +G L ++ K + W Sbjct: 501 AQVDKIAQGQVWLGSEAIEHKLVDELGDLNTALGKAMELVNEKLDENSKIQEEGFSVEWL 560 Query: 261 CDLKNLSISSLLED 274 D + D Sbjct: 561 DDDSGSFFKKFMRD 574 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I+ + DD L++ L+ GG + E + +I+ K K VI Sbjct: 96 DVVYAIDSAALDDKVRGLVLDLNYFQGGDLPSLEFVGASIENFKKNGKQVIAYSDNYNR- 154 Query: 110 AGYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 A Y ++ ++ + V SI G++ + Y K L+ L V+ + K+ PF Sbjct: 155 AQYFLASYADEVYINPVGTV-SIDGLVQENLYYKDLLESLEVNPHVFRVGTYKSAVEPFL 213 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 ++++ +A ++ + ++ + + V+E+RNI + + Sbjct: 214 RNDMSDEAKTNLRRWLGIMWNNYKQRVAENRNIKEEAVAPNA 255 >gi|332762480|gb|EGJ92745.1| signal peptide peptidase SppA, 67K type [Shigella flexneri 4343-70] Length = 594 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 286 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 345 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + K V+ + MAAS GY IS +N IVA ++L Sbjct: 346 LRVNSPGGSVTASEVIRAELAAARAAGKSVVVSMGGMAASGGYWISTPANYIVANPSTLT 405 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 406 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 464 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L + + Sbjct: 465 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQ-WHL 523 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 524 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 560 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 3 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 62 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 63 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 122 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 123 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 181 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 182 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 241 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 242 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 291 >gi|91223668|ref|ZP_01258933.1| protease IV [Vibrio alginolyticus 12G01] gi|91191754|gb|EAS78018.1| protease IV [Vibrio alginolyticus 12G01] Length = 616 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 13/257 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + + D+ A+++ + SPGGSA+A E I Sbjct: 327 IAVVLASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKQAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q+ Q ++ Y F+ LV E+R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDG-ITTGLSEGASQVFQLGIEHGYKRFISLVGENRDMSLEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKN 265 + GR+WTG +A GL+D +G ++ + L D I +++ P + + Sbjct: 506 AQGRVWTGQDALSFGLVDQMGDFDDAVELAAKLANVTDYGIYWVEEPLSPTELFLQEFMK 565 Query: 266 LSISSLLEDTIPLMKQT 282 SL D L+ ++ Sbjct: 566 QVKVSLGIDATSLLPKS 582 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 101/282 (35%), Gaps = 58/282 (20%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ---------- 51 I+ L + + V++ ++ D P V + + G I + + Sbjct: 21 FIRLALANLIFLLMIAVFYFAFTYTGDGQPVVEKESALVMNLSGPIVEQRRYVNPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D + L+++L P + I +A+ + K Sbjct: 81 GSLLGNELPKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KPV S Y ++ ++ + A GVL + Y K L+KL Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKVYLAPDG-----GVLIKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 VS + K+ PF +++ A + V + FV V+ +RNI Sbjct: 195 VSTHVFRVGTYKSAIEPFIRDDMSDAAKESATRWVTQLWSAFVDDVTTNRNIDAKVLNPT 254 Query: 208 SD----------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D G I A K+GL+D + +++ ++L+A Sbjct: 255 MDELINEMKSVNGDI--AQLAVKLGLVDELATRQD-IRTLFA 293 >gi|194367369|ref|YP_002029979.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas maltophilia R551-3] gi|194350173|gb|ACF53296.1| signal peptide peptidase SppA, 67K type [Stenotrophomonas maltophilia R551-3] Length = 640 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 12/264 (4%) Query: 33 DNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ P VA + G+I + + D++ ++++ ++SPGG +A Sbjct: 338 DSRPQVAVVVAAGEISGGDLPAGRIGGESTSALLRAARDDENVKSVVLRVNSPGGEVFAS 397 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + ++ KPV+ + ++AAS GY IS ++ I A +++ GSIG+ P Sbjct: 398 EQIRREVVALQAAGKPVVVSMGDLAASGGYWISMNADRIYADPSTITGSIGIFGMVPNFS 457 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q V++ Y F V+++R P + Sbjct: 458 RALDKIGVHTDGVGTTRFAGAFDVTRPMDPAVGQVIQSVINKGYADFTGRVADARKKPVE 517 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWF 260 ++ GR+W+GA+AK+ GL+D GG ++ + +++ + Sbjct: 518 AVDEVARGRVWSGAQAKERGLVDAFGGLKDAVADAASRAKLGKADAYRVRYIEKAATPFA 577 Query: 261 CDLKNLSISSLLEDTIPLMKQTKV 284 + + S + ++ Sbjct: 578 QFVSGFAGSRAGAWMLSDSGMARM 601 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEM 106 ++L+ IE D +++ L P G +A + A+Q ++ K ++ M Sbjct: 106 RDLLRVIESAKEDKKIERVVLELDKLQPSG--FASLREVAAALQDLRASGKQLVAYSESM 163 Query: 107 AASAGYLISCASNIIVAAETSLVGSI-----GVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 S YL++ ++ + GS+ G QY DKLGV + K K Sbjct: 164 GQS-QYLLAAQADEVYLDPM---GSVVLEGLGRYRQYF-RTGLQDKLGVDVHLFKVGEYK 218 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVLSDGRIWTG 215 + P+ +P + + ++ + ++ ++++R + + L +G G Sbjct: 219 SAAEPYVLDAASPASKEADLFWMNDVWQRYLGDIAKARRLDPAQLAAGIDTLPEGISAAG 278 Query: 216 AE----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + A + L+ + +EE + GV Sbjct: 279 GDLAKFALQQKLVTSLKTREEFEDLMIERGVADD 312 >gi|295399533|ref|ZP_06809515.1| signal peptide peptidase SppA, 36K type [Geobacillus thermoglucosidasius C56-YS93] gi|294978999|gb|EFG54595.1| signal peptide peptidase SppA, 36K type [Geobacillus thermoglucosidasius C56-YS93] Length = 336 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 25/277 (9%) Query: 37 HVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + G I+D+ + + IE+ DD+ A+I+ + SPGG Sbjct: 61 KIVVLEVNGVIQDAGDTEALFTASGYDHRAFLRMIEQAKNDDTVKAIILRVDSPGGGVVE 120 Query: 83 GEAIFRA--IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 I K + +KP+ + MAAS GY IS A++ I A+ +L GS+GV+ Q Sbjct: 121 SAEIHDQLLKLKKETKKPIYVSMGTMAASGGYYISTAADKIFASPETLTGSLGVIIQSFN 180 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + K GV + ++KS P K +P ++ + +++Q ++ +SY FV+++SE R++P Sbjct: 181 YEGLAKKYGVELVTIKSGPYKDIMNPARKMTEEEKEILQRLIHNSYEGFVKVISEGRHLP 240 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + ++DGRI+ G +AK++ LID G E+ A+ D + + ++ F Sbjct: 241 ESEVRKIADGRIYDGRQAKQLKLIDEFGYLEDTI---AAIKKDYDLADAQVVKYTNDFSF 297 Query: 261 CDLKNLSISSLLE------DTIPLMKQTKVQGLWAVW 291 L + +S ++ + I L L ++ Sbjct: 298 GSLFKMELSRMIAPKHEATELIKLFSNPSSPRLMYLY 334 >gi|254508475|ref|ZP_05120594.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus 16] gi|219548587|gb|EED25593.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus 16] Length = 616 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 17/260 (6%) Query: 22 VVYFSW----SSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + Y+ + + ++ +A + G I D + + + DD A Sbjct: 307 ISYYDYQPTMAPSFSTSANDIAVVVASGAIMDGSQPRGTVGGDTVAALLRQARNDDKVKA 366 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T+ Sbjct: 367 VVLRVDSPGGSAFASEVIRNEIEALKEAGKPVVASMSSLAASGGYWISMSADRIVAQPTT 426 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIG+ + L++LGV V +SP + ++ A + Q ++ Y Sbjct: 427 LTGSIGIFSVITTFEKGLNELGVYTDGVGTSPFSDVG-VTTGLSEGAAEAFQLGIEHGYK 485 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--VDQS 245 F +LVS++RNI + ++ GR+WTG +A K GL+D +G ++ L + Sbjct: 486 RFTQLVSDNRNISLTQLDNIAQGRVWTGQDAMKFGLVDSIGDFDDAVSLAAELAEVENYD 545 Query: 246 IRKIKDWNPPKNYWFCDLKN 265 I +++ P + DL N Sbjct: 546 IYWVEEPLSPAQQFIQDLMN 565 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 97/275 (35%), Gaps = 43/275 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS----------- 50 FV + + + S+ + VYF S A I + G I + Sbjct: 21 FVRLALTNLFFLASIAIIYFVYFHAQSEAPTVPTESALILNLSGPIVEQPNYVNPMDSFT 80 Query: 51 --------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D + L+++L P + I +A+ + K Sbjct: 81 GSLIGQDLPKENILFDIVETLRYAKDDPKISGLVLALGDLPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KP+ S Y ++ ++ + A V G Y K L+KL V+ Sbjct: 141 SGKPIYAAGGFYNQS-QYYLASYADKVYLAPDGAVLLKGYSSYSLYYKTLLEKLNVNTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD---------- 202 + K+ PF +++ +A + + + FV ++ +R I + Sbjct: 200 FRVGTYKSAIEPFVRDDMSEEAKESASRWLSQLWGAFVDDIAANRQIKPESLNLSMDEFL 259 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L +DG A + +GL+D + +++V L Sbjct: 260 TLLKKNDGD--LAALSLNIGLVDQLATRQQVRAEL 292 >gi|114706455|ref|ZP_01439357.1| protease IV [Fulvimarina pelagi HTCC2506] gi|114538316|gb|EAU41438.1| protease IV [Fulvimarina pelagi HTCC2506] Length = 312 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 90/267 (33%), Positives = 163/267 (61%), Gaps = 6/267 (2%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +AR++I G I + ++++E ++++ ++ A++V ++SPGG+ GEA++ A+++ Sbjct: 44 TGGDQIARVSIEGMITEDRKMLELLDKLKTEEEVLAVVVRINSPGGTTVGGEALYEAVRE 103 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + KPV EV +AASAGY+++ A++ IVA TS+VGSIGVLFQY LDK+GV + Sbjct: 104 IAEVKPVAAEVGTLAASAGYMVAAATDHIVARRTSIVGSIGVLFQYADASVLLDKIGVEV 163 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + KSSP+KAEPSPF P+A++M+ +++ +Y WF +V E R + + + D + Sbjct: 164 DARKSSPIKAEPSPFGPAPPEALEMIDELIMDTYAWFRDIVGERRGLSRSELAAVDDASV 223 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYA-----LGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 ++G + + L+D +GG+E + Q L G++ R+ +D + P ++ + L Sbjct: 224 FSGRQGVERKLVDAIGGEEIIRQWLEDDRDIPKGLEFVEREPEDEDTPLSFLTESIAALG 283 Query: 268 ISSLLEDTIPL-MKQTKVQGLWAVWNP 293 S L +IP+ ++ ++ GL ++W P Sbjct: 284 TSFGLSQSIPISVRSLELDGLVSLWQP 310 >gi|299535443|ref|ZP_07048765.1| putative signal peptide peptidase sppA [Lysinibacillus fusiformis ZC1] gi|298729204|gb|EFI69757.1| putative signal peptide peptidase sppA [Lysinibacillus fusiformis ZC1] Length = 337 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 15/223 (6%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 E+ +A + + G I+D Q +E+++ I D+S +++S++SPGG Sbjct: 56 ENFDKRIAYLKVDGTIQDIGSSTLWQPVAYDHQFFLEQLDNILYDESIQGVVLSVNSPGG 115 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 I++ + K+K + P+ + MAAS GY IS ++ I A ++ GSIGV+ Sbjct: 116 GVKESADIYKKLLKIKEERQIPIYVSMDSMAASGGYYISAPADKIFAHRDTITGSIGVIM 175 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Q + +K+GV ++ KS K SP EV + MMQD+++ +Y FV +V + Sbjct: 176 QSINYQELAEKVGVKFETFKSGEHKDMLSPMREVTAEERAMMQDMINETYEEFVDIVEQG 235 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 RN+ + ++DGRI G +A + GLID +G +E +L Sbjct: 236 RNMSEAEVKKVADGRILGGTKALEAGLIDEIGDEEAAIAALRE 278 >gi|116072773|ref|ZP_01470039.1| Peptidase S49, SppA [Synechococcus sp. BL107] gi|116064660|gb|EAU70420.1| Peptidase S49, SppA [Synechococcus sp. BL107] Length = 270 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 6/261 (2%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +ARI + G I + Q +++ + + R AL++ + SPGG+ + I A+ +++ Sbjct: 12 RMARIVVEGPINGATRQRVLKALLEVKR-REFPALLLRIDSPGGTVGDSQEIHAALLRLR 70 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 V+ ++AS G I + IV+ ++ GSIGV+ + + +++G+ Sbjct: 71 ENGCRVVASFGNISASGGVYIGVGAEKIVSNPGTITGSIGVILRGNDLSRVFERIGIRFD 130 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +VKS K SP +NP+ ++QD++DSSY FV +V++ RN+ + +DGR++ Sbjct: 131 TVKSGKFKDILSPDRALNPEERALLQDLIDSSYSQFVGVVAKGRNLTEETVKTFADGRVF 190 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 +G +A +GL+D +G ++ + L +DQ + P+ L I S L Sbjct: 191 SGEQALSLGLVDELGDEDHALRLAAQLADLDQDDIRPVTLGRPRRKVSNLLPGSQIVSQL 250 Query: 273 EDTIPLMKQTKVQGLWAVWNP 293 + + + Q LW ++ P Sbjct: 251 QKWLTMELMGSGQVLW-LYRP 270 >gi|46199432|ref|YP_005099.1| putative protease IV transmembrane protein [Thermus thermophilus HB27] gi|46197058|gb|AAS81472.1| putative protease IV transmembrane protein [Thermus thermophilus HB27] Length = 301 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 19/300 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-----------HVARIAIRGQIEDS---Q 51 K+ + L + L V ++ P V + + G+I + Sbjct: 4 KRWLALALFLGVALLVVGLGRLTARPPAQGPWRETTLYGQGEKVLLLELLGEIPSGKALE 63 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + ++ + D+ A+++ + SPGG EA+ RA++ + KP++ + +AAS G Sbjct: 64 RFLSQVRQAREDEGVRAVVLYVESPGGGVTETEALHRALRALAQEKPLVASLGRVAASGG 123 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y ++ A+ I+ T++ GSIGV+ P V L K+GV ++ +K +K SP + Sbjct: 124 YYVATAAREILVPPTAVTGSIGVVGYLPQVGELLAKVGVRVEVLKEGRLKDMASPLRPLT 183 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 P+ +++Q ++ +Y FV+ V+E R +P +K L L+DGRI++G +A +GL D G E Sbjct: 184 PEEREVVQGLLREAYELFVQRVAEGRGMPREKVLALADGRIYSGKQAVALGLADREGYLE 243 Query: 232 EVWQSLYALGVDQSIRKIKDWNPP---KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + + L ++ R ++ P + W ++ LL+ + + GLW Sbjct: 244 DAARRAAELAGLKAFRLVRYTRPKGLLEGLWGEEVP--WAQGLLQARFRVEYRYLGGGLW 301 >gi|145588579|ref|YP_001155176.1| peptidase S49 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046985|gb|ABP33612.1| peptidase S49 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 315 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 14/259 (5%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 H A + + G+I S ++ + ++ + +I+ ++SPGGS + Sbjct: 63 EKHTAMVTLDGEISSSSMANAMDINSALTAAFENEHSAGVILRINSPGGSPVQAGMMNDE 122 Query: 90 IQKVKN---RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I +++ KP V ++ AS GY ++ AS+ I+ + SLVGSIGV+ + +D Sbjct: 123 IHRLRKLHPNKPFYVVVEDICASGGYYVAVASDQILVDKASLVGSIGVIMEGFGFTGLMD 182 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV+ + + + K PFS+ PK V+M++ ++D + F+ +V E R +T Sbjct: 183 KLGVTRRMITAGSNKGMLDPFSKEEPKQVEMVKTMIDEIHQQFIAVVKEGRGARLKETPD 242 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 L GRIW G +A K+GL+D G + V + ++ I D+ +N+ K Sbjct: 243 LFSGRIWNGEQAVKLGLVDGYGTVDSVARDIF------KAPDILDYTQKENFAERVAKRF 296 Query: 267 SISSLLEDTIPLMKQTKVQ 285 + L+K ++ Sbjct: 297 GAEAGAAAGKALVKAPDLK 315 >gi|197285358|ref|YP_002151230.1| protease IV [Proteus mirabilis HI4320] gi|227355792|ref|ZP_03840185.1| protease IV (signal peptide peptidase) [Proteus mirabilis ATCC 29906] gi|194682845|emb|CAR43150.1| protease IV (signal peptide peptidase) [Proteus mirabilis HI4320] gi|227164111|gb|EEI49008.1| protease IV (signal peptide peptidase) [Proteus mirabilis ATCC 29906] Length = 618 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYA 82 E+ ++A + ++G I D + + +I + + + AL++ ++SPGGS A Sbjct: 325 ENEDGNIAVVVVQGAIIDGESIPGSAGGSTIANQIRQARLNPNIRALVLRVNSPGGSVSA 384 Query: 83 GEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I I K K V+ + MAAS GY IS ++ I+A+ ++L GSIG+ Sbjct: 385 SEQIRSEIAAFKQEKKHVVVSMGGMAASGGYWISTPASKIIASPSTLTGSIGIFGVINTF 444 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L+ +GV V +SP+ S +++ ++ Q ++S Y F++LV+ESRN Sbjct: 445 ENSLESIGVHSDGVSTSPLAG-LSVTNKLPEDFSELFQLNIESGYKTFLKLVAESRNKTP 503 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + ++ GR+W G +AK+VGL+D G ++ + + + + + DW P+ Sbjct: 504 AQVDRIAQGRVWVGVDAKQVGLVDEFGDFDDAINAAATMAKIK--QPVIDWMKPELSLSE 561 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQG 286 + +S+S+ + IP Q + Sbjct: 562 QIL-MSLSANAKAIIPDPLQAYLPA 585 Score = 87.9 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 93/285 (32%), Gaps = 53/285 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ-------- 51 + F+ K I L +YF + A + ++G I D Sbjct: 19 INFIRKLILNVIFFFLLFMGVGLYFIVQETQKPTDYQGALLVDLKGVIVDQTANQNPLGQ 78 Query: 52 -------------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IF 87 E+++ + + + D +++ L + + Sbjct: 79 MSRELLGVSGSQLQENSLFEVVDTLRKAATDPKIKGMVLKLD----EFAGADQPSLNYVG 134 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +A+ + K KP+ + + Y ++ ++ I A VG G+ F Y K L+ Sbjct: 135 KALTEFKKTGKPIYA-ISGYYSQPQYYLASYADKIYLASQGAVGIYGLGFSNLYYKSLLE 193 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 KL V+ + K+ P ++ +A +V + ++ V+E+R+I + Sbjct: 194 KLKVNTHIFRVGTYKSAVEPLMRDNMSDEARAASNRLVSVLWSNYLTQVAENRSITKEDV 253 Query: 205 ----------LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L +DG A L+D V + + Sbjct: 254 FPGAKEMIVELRKADGD--NATYALNRKLVDTVSSYAQFEADMKE 296 >gi|328474533|gb|EGF45338.1| protease IV [Vibrio parahaemolyticus 10329] Length = 616 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 13/257 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + + D+ A+++ + SPGGSA+A E I Sbjct: 327 IAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKKAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q Q ++ Y F+ LV +R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDG-ITTGLSEGASQAFQLGIEHGYKRFISLVGSNRDMTVEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKN 265 + GR+WTG +A GL+D +G ++ + L D I +++ P + + N Sbjct: 506 AQGRVWTGQDALSFGLVDQMGDFDDAVELAAKLANVTDYGIYWVEEPLSPTELFLQEFMN 565 Query: 266 LSISSLLEDTIPLMKQT 282 SL D L+ ++ Sbjct: 566 QVKVSLGVDATSLLPKS 582 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 102/283 (36%), Gaps = 60/283 (21%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ---------- 51 I+ L + + V++ ++ + P + + + G I + + Sbjct: 21 FIRLALANLIFLLMIAVFYFAFTYTGEGRPVIEKESALVMNLSGPIVEQRRYVNPMDSVA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D + L+++L P + I +A+ + K Sbjct: 81 GSLLGNEMPKENVLFDIVDTIRYAKDDAKVSGLVLALRDLPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KPV S Y ++ ++ + A GVL + Y K L+KL Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKVYMAPDG-----GVLIKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----- 202 VS + K+ PF +++ A + V + FV V+ +RNI Sbjct: 195 VSTHVFRVGTYKSAIEPFIRDDMSDAAKESATRWVTQLWSAFVDDVTTNRNINAKVLNPT 254 Query: 203 ------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + DG A K+GL+D + +++ ++L+A Sbjct: 255 MEELLTEMKSV-DGD--LAQLAVKMGLVDELATRQD-IRTLFA 293 >gi|262278137|ref|ZP_06055922.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] gi|262258488|gb|EEY77221.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] Length = 338 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 19/298 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWS---SHVEDNSPHVARIAIRGQIE-------DSQEL 53 + K T +L ++ L S S S V +S H+A + I G I+ +S++ Sbjct: 44 IFFKTLTFIYLLFIIVLMGKGCSTSKEGSAVSSSSAHLAVVDIIGTIDASSNQSVNSEDT 103 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + ++R ++ A+ ++++SPGGS + I++ I+ +K + P V + +M AS Sbjct: 104 NKALKRAFEASNSKAVALNINSPGGSPVQSDEIWQEIRYLKKQHPDKKVYAVIGDMGASG 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I+ +SLVGSIGV+ + KLG+ +++ + K S + Sbjct: 164 AYYIASAADEIIVNPSSLVGSIGVIMPNYGISGLAQKLGIEDRTLTAGTNKDILSMTKPI 223 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGG 229 +P Q +Q V+D+ + F+ V E R + G WTG +A ++G+ D G Sbjct: 224 DPVQKQHIQSVLDNVHTHFITAVKEGRGKRLKSNDPAIFSGLFWTGDQAIQLGVADRSGN 283 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + L + + + NP ++ +S + + + K+Q Sbjct: 284 ITSLMREL---NLGNKVDYTIERNPLESILGRMGAQLGQGVSESIAQEVQTSQSAKLQ 338 >gi|311279913|ref|YP_003942144.1| signal peptide peptidase SppA, 67K type [Enterobacter cloacae SCF1] gi|308749108|gb|ADO48860.1| signal peptide peptidase SppA, 67K type [Enterobacter cloacae SCF1] Length = 617 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 15/280 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 V ++ ++ D VA I G I D QE +I D A++ Sbjct: 309 AVSFYDYTLKTPSDQGSAVAVIFANGAIIDGQETPGNVGGDTTAAQIRDARLDPKVKAIV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 369 LRVNSPGGSVSASEVIRAELAAAREANKPVVVSMGGMAASGGYWISTPANYIVANASTLT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L LGV V +SP+ S + P+ QMMQ ++S Y F Sbjct: 429 GSIGIFGVINTVENSLSNLGVHTDGVSTSPLADV-SITKSLPPEVQQMMQLSIESGYKRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV++SR+ ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 488 ITLVAQSRHSTPEQVDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKLKQ-WHI 546 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +++ L +L+ S + ++P Q + A Sbjct: 547 SYYQEEPSFFSMMLDSLTGS--VRASLPEALQAFLPAPLA 584 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 117/298 (39%), Gaps = 47/298 (15%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDS-------- 50 + FV + + +++L LV + V + SS++ ++ A + I G + D Sbjct: 19 LNFVRELVLNVFFILLVLVCVGV-WMQLSSNIAQSTARGALLLDISGVVVDKPSATSKIG 77 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + D + T +++ L + G+ + I +A+ Sbjct: 78 TLSRQLLGASSDRLQENSLFDIVQTIRQAKDDRNITGIVLDLKNFAGADQPSMQYIGKAL 137 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KPV V + + Y ++ +N I + +V G Y K LDKL Sbjct: 138 REFRDSGKPVFA-VGDSYSQGQYYLASFANKIFLSPQGIVDLHGFATNGLYYKSLLDKLK 196 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF +++P A + + + ++ V+ +R I ++ Sbjct: 197 VTTHVFRVGTYKSAVEPFIRDDMSPAAKEADSRWIGELWQNYLTTVAANRQITPEQVFPG 256 Query: 208 SDGRI--------WTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 + G + T A L+D + +V + L D++ R + ++ Sbjct: 257 AQGMLDGLRKVDGDTAQYALNNKLVDSLATSAQVEKVLTKQFGWSATDKNYRAVSFYD 314 >gi|153829820|ref|ZP_01982487.1| protease IV [Vibrio cholerae 623-39] gi|148874679|gb|EDL72814.1| protease IV [Vibrio cholerae 623-39] Length = 616 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAIVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D L+ + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 TQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|260776353|ref|ZP_05885248.1| protease IV [Vibrio coralliilyticus ATCC BAA-450] gi|260607576|gb|EEX33841.1| protease IV [Vibrio coralliilyticus ATCC BAA-450] Length = 616 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 13/266 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGS 79 + + +A + G I D + + + DD A+++ + SPGGS Sbjct: 318 PKFDLSQDDIAIVVASGAIMDGSQPRGATGGDTVAALLRQARNDDKIKAVVLRVDSPGGS 377 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I I+ +K KPV+ + +AAS GY IS ++ IVA T+L GSIG+ Sbjct: 378 AFASEVIRNEIEALKETGKPVVASMSSLAASGGYWISMGADRIVAQPTTLTGSIGIFSVI 437 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + L+KLGV V +SP + ++ A Q ++ YH F+ LVSESR Sbjct: 438 TTFEKGLNKLGVYTDGVGTSPFSGVG-ITTGLSDGAADAFQMGIEHGYHRFIGLVSESRE 496 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPK 256 IP ++ GR+WTG +A K+GL+D +G ++ + L D ++ +++ P Sbjct: 497 IPLKDMDSIAQGRVWTGQDAAKLGLVDKMGDFDDAVKLAAELAKVEDYNLYWVEEPLSPA 556 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQT 282 + D N +L D L+ Sbjct: 557 EQFIQDFMNQVKVNLGVDASALLPAA 582 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 100/283 (35%), Gaps = 48/283 (16%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ----- 51 + + ++ L T+ ++YF ++S E P V + I G I + Sbjct: 17 KLITFIRLALVNLIFLATIGIIYFIYTS-AESPVPSVPQESALVLNISGPIVEQSRYVNP 75 Query: 52 --------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAI 90 +++E I D T ++++L P + I +A+ Sbjct: 76 MDSFTGSLFGQDMPRENVLFDIVESIRHAKDDPKITGIVLALRDMPETNLTKLRYIAKAL 135 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K KP+ S Y ++ ++ I A V G Y K L+KL Sbjct: 136 NEFKASGKPIYAAGEFYNQS-QYYLASYADKIYLAPDGAVLIKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---- 203 V+ + K+ PF +++ A + + + +V V+ +R + Sbjct: 195 VNTHVFRVGTYKSAIEPFVRDDMSDAAKESASRWLGQLWGAYVDDVATNRQVSAKTLNPT 254 Query: 204 ------TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L DG A + ++GL+D + +++V L + Sbjct: 255 MEEFLGLLKEQDGD--LAALSLELGLVDELATRQQVRSDLTEV 295 >gi|145297988|ref|YP_001140829.1| signal peptide peptidase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850760|gb|ABO89081.1| signal peptide peptidase [Aeromonas salmonicida subsp. salmonicida A449] Length = 614 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 13/271 (4%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++ V I G I D L + + RDD A+++ + SPGGSA+A Sbjct: 320 QNGKDEVGLIVASGAIMDGVQSAGTIGGDSLSDLLADARRDDKVKAVVLRVDSPGGSAFA 379 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + +K KPV+ + AAS GY IS ++ I A+ T+L GSIGV + + Sbjct: 380 AEQIRAELLALKQAGKPVVISMGSYAASGGYWISADADKIFASPTTLTGSIGVFGMFATI 439 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + G+ V ++ + Q +Q V+ +Y FV LVS+ R + Sbjct: 440 DKALSQYGIHTDGVGTTDYVGVG-LTRALPEHVGQAIQLSVEDTYQRFVGLVSKGRGLSP 498 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS--IRKIKDWNPPKNYW 259 + ++GR+WTG +AK +GL+D G QE+ ++ L + + I+ ++ + Sbjct: 499 QEAEKAAEGRVWTGQDAKALGLVDEFGNQEDAIKAAATLANLKEWQVTPIEQEESARDKF 558 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 L + S +L + + L V Sbjct: 559 LRQLFDSSAQALAPHLQSWLPAGFGKALVEV 589 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 30/215 (13%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 +L+ I DD AL++ P G S + + AI + K KPVI + + Sbjct: 94 DLLWAIRSAKDDDRIKALVIK---PQGLQGTSLSKLQEVAGAIDEFKESGKPVIA-MADY 149 Query: 107 AASAGYLISCASNIIVAAETSLV---GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ ++ ++ ++ V G +GV Y K L+KL V+ K K+ Sbjct: 150 YNQGQYLLAAHADHVLLNQSGAVLIEG-LGVYQTY--FKSALEKLNVTPHVFKVGTYKSF 206 Query: 164 PSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----------KTLVLSDGR 211 P++ E++P++ + Q +D + +V V+E R I + + L + G Sbjct: 207 VEPYTRDEMSPESKEANQRWLDQLWQSYVADVAEQREIEPEAVAPSKDRFLELLRKAGGN 266 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQS-LYALGVDQS 245 + A GL+D + ++E+ Q+ + +G D+ Sbjct: 267 --AASYALDNGLVDQLATRDEMTQAVIKEVGEDED 299 >gi|149275724|ref|ZP_01881869.1| protease IV [Pedobacter sp. BAL39] gi|149233152|gb|EDM38526.1| protease IV [Pedobacter sp. BAL39] Length = 591 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 11/250 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSP 76 + ++ + +A I G+I S+ + I + D S A+++ ++SP Sbjct: 299 ATTNKSKSGKNKIAVIYANGEITGGEGSDEQIGSERISRTIRKARSDSSVKAIVLRVNSP 358 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA A + I+R I K KPVI +AAS GY I CA++ I ++ GSIGV Sbjct: 359 GGSALASDVIWREIVLAKKVKPVIASFGNVAASGGYYIGCAADSIFVQPNTITGSIGVFG 418 Query: 137 QYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 P + L+K LG++ VK+ S + ++Q+ V+ +Y F+ V++ Sbjct: 419 VIPNFQKLLNKELGITFDGVKTGTYADIMSVNRPLTAGERFIIQNEVNRTYDGFITRVAD 478 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + GR+W G +A ++GL D G + + + K+ ++ Sbjct: 479 GRKRSKSYIDSIGGGRVWVGTDAVRLGLADRTGSFNDAITAAVKKAKLKEY-KVVEYPEV 537 Query: 256 KNYWFCDLKN 265 N + N Sbjct: 538 INPLKSLMDN 547 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 89/201 (44%), Gaps = 3/201 (1%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++I+ ++ D++ + +++SSP + I A+ + + I E+ + Sbjct: 86 DIIKALDAAKTDNNIRCVYLNVSSPNAGFANMKEIRDAMIDFRKSRKKIIAYSEVYSQGA 145 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ A++ I + G+ + + K L+KLG+ + ++ K+ PF + Sbjct: 146 YYLASAADKIYLNPEGALEFKGLSSEIMFFKGALEKLGIEAQIIRVGTYKSAVEPFINDK 205 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDVVG 228 ++ K + + ++ Y F+ +S SR I D ++D +I +A K L+D + Sbjct: 206 MSDKNREQVTVYLNGLYRTFLGGISASREIDADSLYAIADQYKIQQPNDALKYKLVDQLA 265 Query: 229 GQEEVWQSLYALGVDQSIRKI 249 +++V + L L I Sbjct: 266 YKDKVLEELKKLSDTDPSDNI 286 >gi|28898926|ref|NP_798531.1| protease IV [Vibrio parahaemolyticus RIMD 2210633] gi|153838581|ref|ZP_01991248.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ3810] gi|260363623|ref|ZP_05776430.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus K5030] gi|260878875|ref|ZP_05891230.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AN-5034] gi|260896203|ref|ZP_05904699.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus Peru-466] gi|260900719|ref|ZP_05909114.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ4037] gi|28807145|dbj|BAC60415.1| protease IV [Vibrio parahaemolyticus RIMD 2210633] gi|149748046|gb|EDM58905.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ3810] gi|308088812|gb|EFO38507.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus Peru-466] gi|308094244|gb|EFO43939.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AN-5034] gi|308109743|gb|EFO47283.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus AQ4037] gi|308115086|gb|EFO52626.1| signal peptide peptidase SppA, 67K type [Vibrio parahaemolyticus K5030] Length = 616 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 13/257 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + + D+ A+++ + SPGGSA+A E I Sbjct: 327 IAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKKAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q Q ++ Y F+ LV +R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDG-ITTGLSEGASQAFQLGIEHGYKRFISLVGSNRDMTVEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKN 265 + GR+WTG +A GL+D +G ++ + L D I +++ P + + N Sbjct: 506 AQGRVWTGQDALSFGLVDQMGDFDDAVELAAKLANVTDYGIYWVEEPLSPTELFLQEFMN 565 Query: 266 LSISSLLEDTIPLMKQT 282 SL D L+ ++ Sbjct: 566 QVKVSLGVDATSLLPKS 582 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 102/283 (36%), Gaps = 60/283 (21%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ---------- 51 I+ L + + V++ ++ + P + + + G I + + Sbjct: 21 FIRLALANLIFLLMIAVFYFAFTYTGEGRPVIEKESALVMNLSGPIVEQRRYVNPMDSVA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D + L+++L P + I +A+ + K Sbjct: 81 GSLLGNEMPKENVLFDIVDTIRYAKDDAKVSGLVLALRDLPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KPV S Y ++ ++ + A GVL + Y K L+KL Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKVYMAPDG-----GVLIKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP------- 200 VS + K+ PF +++ A + V + FV V+ +RNI Sbjct: 195 VSTHVFRVGTYKSAIEPFIRDDMSDAAKESATRWVTQLWSAFVDDVTTNRNINAKVLNPT 254 Query: 201 ----YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + DG A K+GL+D + +++ ++L+A Sbjct: 255 MEELLAEMKSV-DGD--LAQLAVKMGLVDELATRQD-IRTLFA 293 >gi|34581630|ref|ZP_00143110.1| protease IV [Rickettsia sibirica 246] gi|28263015|gb|EAA26519.1| protease IV [Rickettsia sibirica 246] Length = 304 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 147/285 (51%), Gaps = 7/285 (2%) Query: 10 TRYVMLSLVTLTVVYFSWSSHV---EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 T +++++V L V V N ++A + I I + ++ +++++I D Sbjct: 24 TAIILIAIVFLLVGKDFAPKEVLPINSNEDYIASVLIDEIILEDEKRDKKLKKIIDDSHI 83 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 ALIV+++SPGG+ E I+ ++K+ +KPV+ + MA S GYLIS + I++ Sbjct: 84 KALIVNVNSPGGTVVGAEKIYNILRKISAKKPVVIVMGTMATSGGYLISLGGDYIISHNG 143 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV+ Q V KLG+ + KS +KA P+P ++ + D ++ +Y Sbjct: 144 TITGSIGVILQTAEVTELAQKLGIKFNNFKSGELKAVPNPTEKLTEAVRVAIMDNIEDTY 203 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 ++F+ LVSE RN+P ++ L+DGR+++G +A K+ L+D +G ++ + L + Sbjct: 204 NFFLELVSERRNLPIEEVKKLADGRVYSGRQALKLKLVDAIGSEDTALKWLQEVQKINVN 263 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 +KD+ D+ I + P + G+ A++ Sbjct: 264 LLVKDYQLKPKPKLMDI----ILEDFDSIAPSFFKNSFNGIKAIF 304 >gi|307566027|ref|ZP_07628485.1| signal peptide peptidase SppA, 67K type [Prevotella amnii CRIS 21A-A] gi|307345215|gb|EFN90594.1| signal peptide peptidase SppA, 67K type [Prevotella amnii CRIS 21A-A] Length = 592 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 5/271 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 VY+ V+ V+ RG + D+Q++ + + +I+ DD A+++ ++S GGSA Sbjct: 306 IAVYYMAGDIVDGT---VSNPMARGSVIDAQKVCKDLAKIAADDDVKAVVIRVNSGGGSA 362 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+ I ++K +KPV+ + MAAS Y +S +N+IVA T+L GSIG+ +P Sbjct: 363 YASEQIWHYIMELKKKKPVVVSMGGMAASGAYYLSAPANLIVADPTTLTGSIGIFGMFPD 422 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L +KLGV V ++ A + + ++++ V Y F V+E R + Sbjct: 423 FSGLLREKLGVKFDEVSTNKHAAFGTISRPFTIEEMRLLSQYVGRGYKLFCNRVAEGRKL 482 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + + ++ G ++TG AK +GL+D +GG + L + +D+ P ++ Sbjct: 483 SFQQINKIAQGHVYTGEYAKTIGLVDYLGGLDVAISKAANLAKIRDYY-TQDYPEPLSWV 541 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 + S L+D + Q + Sbjct: 542 EQIFDEDIVGSYLDDKVKAQLGDFYQPYIML 572 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 102/268 (38%), Gaps = 39/268 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-------------------- 52 + + L ++ S V DNS V I + GQ+ D+Q+ Sbjct: 25 FFIGSILLMIIGSSHKESVADNS--VLTINLTGQMADNQQEDNPLDKFMGNAIKSISLNT 82 Query: 53 LIERIERISRDDSATAL-----IVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHE 105 ++ ++ D + + S + +A+ + K VI Sbjct: 83 FVKGLKIAKEDKKIKGVYLEAGLFQADS----YATLQEARKALLDFQKGSGKWVIAYADS 138 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y ++ A+ + ++ G+ Q ++K + K GV + K K+ Sbjct: 139 YTQQ-SYYLASAATKVYLNPQGMIDWHGLAAQPLFLKDAMAKFGVKMHVAKVGKYKSATE 197 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA--EAKKV 221 F+E ++ + + + + V+ V++SRN+ ++ +D I A + K++ Sbjct: 198 MFTEDKMSEANREQTKAYISGIWGNVVKEVAQSRNLTVEQLNNYADSAITFAAPTDYKRM 257 Query: 222 GLIDVVGGQEEVWQSL-YALGVDQSIRK 248 L+D + +++ Q + +GV+ +++ Sbjct: 258 KLVDGLLYSDQIKQLVKKKMGVEDDLQQ 285 >gi|307155357|ref|YP_003890741.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7822] gi|306985585|gb|ADN17466.1| signal peptide peptidase SppA, 36K type [Cyanothece sp. PCC 7822] Length = 274 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 143/268 (53%), Gaps = 10/268 (3%) Query: 34 NSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 S +ARI I G I +++++ ++++ AL++ + SPGG+ + I++A++ Sbjct: 9 TSKQIARIEITGVIASQTRKQVLKALKKVEE-KKYPALLLRIDSPGGTVGDSQEIYQALR 67 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 68 RLQDKVKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVIIRGNNLERLLDKIGVS 127 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K +KS P K S +++ ++Q+++D SY FV+ V++SRN+ + +DGR Sbjct: 128 FKVIKSGPYKDILSFDRDLSAAEQDILQEMIDISYQQFVQTVADSRNLEVETVKTFADGR 187 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 I+TG +A +G++D +G +E+ + L L G+D + + PK+ L + I++ Sbjct: 188 IFTGEQALNLGVVDRLGSEEDARRWLAELVGLDPLKTECQTIEQPKSLVNRILGSTRIAT 247 Query: 271 LLE-----DTIPLMKQTKVQGLWAVWNP 293 D + T LW ++ P Sbjct: 248 KSRLGGALDWVEFELATNNLPLW-LYRP 274 >gi|293557142|ref|ZP_06675696.1| putative signal peptide peptidase [Enterococcus faecium E1039] gi|291600711|gb|EFF31009.1| putative signal peptide peptidase [Enterococcus faecium E1039] Length = 341 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++ + G I + + +E+++ + D + + + ++SPGG Sbjct: 55 GDSTQKIVKLTVDGTIAAGGSSGLFASEGYNHENFMEQLKAVEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FVR+VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEEAVLQAYIDSAYQRFVRIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN + ++DGRI+ G +AK+VGL+D +G E+ Q++ + ++ + Sbjct: 235 RNKSEEAVKKIADGRIYDGVQAKEVGLVDELGFPEDALQAMRKEQKLEDAELVEYSSTSS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|237809431|ref|YP_002893871.1| signal peptide peptidase SppA, 67K type [Tolumonas auensis DSM 9187] gi|237501692|gb|ACQ94285.1| signal peptide peptidase SppA, 67K type [Tolumonas auensis DSM 9187] Length = 616 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 13/250 (5%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 N P V + G I D + L ++I D AL++ + SPGGSA+A E Sbjct: 323 NKPQVGLLVAAGAIVDGMSQPGTINGEALAKQIRTAMYDSKIKALVLRIDSPGGSAFAAE 382 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I A+ K KP++ + MAAS GY I+ ++ I A ++ GSIGV + + Sbjct: 383 QIRTALLAFKASGKPLVVSMGSMAASGGYWIAADADKIYAEPVTITGSIGVFGMFLTAEK 442 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ LGV + ++ SP + Q++Q V+++Y F+ LV+E R + ++ Sbjct: 443 ALNSLGVHTDGLGTTDFTGI-SPTQPLPDHIKQIVQLNVENTYQRFLDLVAEGRGMTPEQ 501 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFC 261 ++ GR+W G +AKK+GL+D +G + L D + I+ K+ Sbjct: 502 VDKVAQGRVWIGTDAKKLGLVDELGSLSDASAEAGRLAKLTDYQLTLIEPELSAKDKLLR 561 Query: 262 DLKNLSISSL 271 + N S L Sbjct: 562 EFFNQSAEIL 571 Score = 77.9 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 100/274 (36%), Gaps = 32/274 (11%) Query: 4 VLKKIKTRYVMLSLVTL-------------TVVYFSWSSHVEDNSPHVARIAIRGQIEDS 50 +L I V+L ++ L V+ S + +P+ A I + DS Sbjct: 26 ILNLIFIAIVLLIVIGLREEAPEEAIDEGALVLDLSGKLVEQPTTPNPADQLIENWLSDS 85 Query: 51 Q--------ELIERIERISRDDSATALIVS-LSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 +++ I+ +D +++ ++ S I +A+ + K K + Sbjct: 86 DKPREIAVGDVVYVIQEAKKDPRVKGIVLKTVNLETTSIGKLLTITQALDEFKQSKKPVV 145 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V YL++ ++ I+ V G+ Y K L+K ++ + K Sbjct: 146 AVGNFYQQHQYLLAAHADTILLNPAGAVTIQGLGLYNLYFKSALEKFNLTPHVFRVGTYK 205 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--------LVLSDGR 211 + P+ +++ +A + Q + + + +V S++R+IP D L+ Sbjct: 206 SFVEPYIRDDMSAEAREANQRWLGAVWQEYVTNASKARHIPADAIAPTKEQVLERLTKAE 265 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + GL+D + +E+ ++ Sbjct: 266 GNAAQYALEQGLVDQLATYDEMTDTIRDFAGSDE 299 >gi|269965994|ref|ZP_06180086.1| Protease IV [Vibrio alginolyticus 40B] gi|269829390|gb|EEZ83632.1| Protease IV [Vibrio alginolyticus 40B] Length = 616 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 13/257 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + + D+ A+++ + SPGGSA+A E I Sbjct: 327 IAVVLASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKQAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP+ + + ++ A Q+ Q ++ Y F+ LV E+R++ ++ + Sbjct: 447 LGINTDGVGTSPLSGDG-ITTGLSEGASQVFQLGIEHGYKRFISLVGENRDMSLEEVDKV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKN 265 + GR+WTG +A GL+D +G ++ + L D I +++ P + + Sbjct: 506 AQGRVWTGQDALSFGLVDQMGDFDDAVELAAKLANVTDYGIYWVEEPLSPTELFLQEFMK 565 Query: 266 LSISSLLEDTIPLMKQT 282 SL D L+ ++ Sbjct: 566 QVKVSLGIDATSLLPKS 582 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 101/282 (35%), Gaps = 58/282 (20%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ---------- 51 I+ L + + V++ ++ D P V + + G I + + Sbjct: 21 FIRLALANLIFLLMIAVFYFAFTYTGDGQPVVEKESALVMNLSGPIVEQRRYVNPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D + L+++L P + I +A+ + K Sbjct: 81 GSLLGNELPKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KPV S Y ++ ++ + A GVL + Y K L+KL Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKVYLAPDG-----GVLIKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 VS + K+ PF +++ A + V + FV V+ +RNI Sbjct: 195 VSTHVFRVGTYKSAIEPFIRDDMSDAAKESATRWVTQLWSAFVDDVTTNRNIDAKVLNPT 254 Query: 208 SD----------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D G I A K+GL+D + +++ ++L+A Sbjct: 255 MDELINEMKSVNGDI--AQLAVKLGLVDELATRQD-IRTLFA 293 >gi|229844213|ref|ZP_04464354.1| protease IV [Haemophilus influenzae 6P18H1] gi|229813207|gb|EEP48895.1| protease IV [Haemophilus influenzae 6P18H1] Length = 615 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADSNTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPTLDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLAALFGKGSDGKANLIE 303 >gi|145637565|ref|ZP_01793222.1| protease IV [Haemophilus influenzae PittHH] gi|145269251|gb|EDK09197.1| protease IV [Haemophilus influenzae PittHH] Length = 615 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENSGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLTGDGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D + I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLAALFGKGSDGKVNLIE 303 >gi|16273441|ref|NP_439690.1| protease IV [Haemophilus influenzae Rd KW20] gi|260580322|ref|ZP_05848151.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae RdAW] gi|1174428|sp|P45243|SPPA_HAEIN RecName: Full=Protease 4; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase gi|1574383|gb|AAC23191.1| protease IV (sppA) [Haemophilus influenzae Rd KW20] gi|260092999|gb|EEW76933.1| signal peptide peptidase SppA, 67K type [Haemophilus influenzae RdAW] Length = 615 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADSNTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLSDT 567 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 116/295 (39%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLSALFGKGSDGKANLIE 303 >gi|118602039|ref|YP_908739.1| peptidase [Photobacterium damselae subsp. piscicida] gi|118614779|ref|YP_908562.1| peptidase [Photobacterium damselae subsp. piscicida] gi|134044555|ref|YP_001101707.1| signal peptide peptidase SppA domain-containing protein [Yersinia ruckeri] gi|134044941|ref|YP_001102082.1| signal peptide peptidase SppA domain-containing protein [Yersinia pestis biovar Orientalis str. IP275] gi|134047167|ref|YP_001101892.1| signal peptide peptidase SppA domain-containing protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|229516096|ref|ZP_04405546.1| hypothetical protein VCC_000110 [Vibrio cholerae RC9] gi|300925750|ref|ZP_07141608.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|118596870|dbj|BAF38174.1| peptidase [Photobacterium damselae subsp. piscicida] gi|118597048|dbj|BAF38351.1| peptidase [Photobacterium damselae subsp. piscicida] gi|133904918|gb|ABO40935.1| signal peptide peptidase SppA domain protein [Yersinia ruckeri] gi|133905086|gb|ABO41101.1| signal peptide peptidase SppA domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|133905475|gb|ABO42237.1| signal peptide peptidase SppA domain protein [Yersinia pestis biovar Orientalis str. IP275] gi|229346876|gb|EEO11844.1| hypothetical protein VCC_000110 [Vibrio cholerae RC9] gi|300418172|gb|EFK01483.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|324007588|gb|EGB76807.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2] Length = 325 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L ++ ++ + + +PH A I IRG+I D+ LI Sbjct: 40 MLRVLRASGFVLLMIGFIILASNPGGMPWQSAKAGAPHTAYINIRGEIAAGTLADADHLI 99 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ + K V + ++ AS G Sbjct: 100 PSIQAAFDNPNSQAIVLRINSPGGSPVQAGRIYDEVKAQRALHPEKKVYAIIDDIGASGG 159 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A SLVGSIGV+ +DKLG+ +++ S KA PFS + Sbjct: 160 YYIASAADEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLT 219 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + V+ ++ F+ V R + G +W G +AK +GLID +G Sbjct: 220 SDMKKFWEGVLSKTHQQFIERVKAGRGDRLKDDPEVFSGLLWNGEQAKDIGLIDGLGSLN 279 Query: 232 EVWQSL 237 V + + Sbjct: 280 SVARDV 285 >gi|146311337|ref|YP_001176411.1| protease 4 [Enterobacter sp. 638] gi|145318213|gb|ABP60360.1| signal peptide peptidase SppA, 67K type [Enterobacter sp. 638] Length = 618 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 15/283 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 V + +++ + VA + G I D +E +I D A++ Sbjct: 310 AVSLYDYTTKKPSETGDSVAVVFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVSASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD LGV V +SP+ S + P+ QMMQ +++ Y F Sbjct: 430 GSIGIFGVINTVENSLDYLGVHTDGVATSPLADV-SVTKSLPPEVSQMMQLTIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ESR ++ ++ G +WTG +AK GL+D +G ++ L + I Sbjct: 489 ITLVAESRKSTPEQIDKIAQGHVWTGQDAKNNGLVDSLGDFDDAVAKAAELAKLKQ-WHI 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKVQGLWAV 290 + + + +S+S ++L I V +V Sbjct: 548 AYYQDEPTFIDMVMNGMSVSVRAMLPAAIQAYLPAPVATAASV 590 Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 111/281 (39%), Gaps = 44/281 (15%) Query: 1 MEFVLKK-IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS-------- 50 + F+ + + ++ L LV + V SS+ NS A + I G I D Sbjct: 19 LNFIRELVMNVFFIFLILVCVGVWMHISSSNQAQNSGRGALLLDITGVIVDKPSASNRLG 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 +++E I + D + T +++ L + G+ + I +A+ Sbjct: 79 VIGRQLFGATSDRLQENSLFDIVEAIRQAKDDRNITGIVLDLKNFAGADQPSMQYIGKAL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KPVI V + + Y ++ +N I + V G Y K L+KL Sbjct: 139 REFRDSGKPVIA-VGDSYSQGQYYLASFANKIWLSPQGTVDLHGFATNGLYYKSLLEKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF ++++P A + + ++ ++ V+ +R + ++ Sbjct: 198 VTTHVFRVGTYKSAVEPFIRNDMSPAAREADSRWIGELWNNYLTTVAANRQVTPEQIFPG 257 Query: 208 SDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + + G + A L+D +G ++ ++L Sbjct: 258 AQAML-DGLQKVDGDTAKYALDNKLVDTLGSSADIEKALTK 297 >gi|71907637|ref|YP_285224.1| peptidase S49 [Dechloromonas aromatica RCB] gi|71847258|gb|AAZ46754.1| Peptidase S49 [Dechloromonas aromatica RCB] Length = 320 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 18/276 (6%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 K + Y+++ L+ + W + E H A + + G IE +++ L+ + Sbjct: 39 FKALGFVYLLVVLIAVV----DWGAGAEHQERHTAMVNLTGVIEAKGEANAENLVAALNS 94 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 + +A +I+ ++SPGGS I I++++ + KP+ V +M AS GY ++ Sbjct: 95 AFDEKNAVGIILRINSPGGSPVQAGIINDEIRRLRGKYPAKPLYAVVEDMCASGGYYVAA 154 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DK GV + + + K PFS P+ Sbjct: 155 AADNIYVNKASIVGSIGVLMDGFGFTGTMDKAGVERRLLTAGENKGFLDPFSPQAPQHKA 214 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q +++ + F+ +V R +T + G +WTGA++ ++GL D G + V + Sbjct: 215 HAQLLLNDIHKQFIDVVKAGRGKRLKETPEMFSGLMWTGAQSIQLGLADDFGSVDSVARD 274 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 + K+ D++ N K L S+ Sbjct: 275 II------KAEKVLDYSVKDNIAERFAKRLGASTFA 304 >gi|209526666|ref|ZP_03275190.1| signal peptide peptidase SppA, 36K type [Arthrospira maxima CS-328] gi|209492902|gb|EDZ93233.1| signal peptide peptidase SppA, 36K type [Arthrospira maxima CS-328] Length = 273 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 137/265 (51%), Gaps = 7/265 (2%) Query: 35 SPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI I G I D+++ + + + AL++ + SPGG+ + I+ A++ + Sbjct: 10 RKQIARIEISGAIAGDTRKRVLEALKTVEERKFPALLLRIDSPGGTVGDSQEIYSALKSL 69 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K Sbjct: 70 RKKVKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSFK 129 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K + E+ Q++Q+++D+SY FV V+ESRN+ + +DGRI+ Sbjct: 130 VIKSGPYKDILAFDRELTEPEQQILQELIDTSYQQFVSTVAESRNLEIEAVRSFADGRIF 189 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLK-NLSISSL 271 TG +A ++G+ID +G +E+ + + +D + PK+ L NL+ ++ Sbjct: 190 TGEQALQLGVIDRLGSEEDARRWTAEMVNLDPDKTECCTLEKPKSLLNRVLSNNLAATNR 249 Query: 272 LEDT---IPLMKQTKVQGLWAVWNP 293 + D + T LW ++ P Sbjct: 250 ISDARNWVEFELSTSGLPLW-LYRP 273 >gi|254286923|ref|ZP_04961875.1| protease IV [Vibrio cholerae AM-19226] gi|150423073|gb|EDN15022.1| protease IV [Vibrio cholerae AM-19226] Length = 616 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAIVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D L+ + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|293390212|ref|ZP_06634546.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950746|gb|EFE00865.1| signal peptide peptidase SppA, 67K type [Aggregatibacter actinomycetemcomitans D7S-1] Length = 626 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 12/254 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 D +A + + G I D + + + + D A+++ ++SPGGSA+A Sbjct: 322 GDTKNKIAVVNVEGAIIDGETDEENVGGDTIANLLRKAYDDKDVKAVVLRVNSPGGSAFA 381 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + ++ KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P Sbjct: 382 SEIIRQELSHLQQAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPTF 441 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + K+GVS VK+S + A S FS ++ + ++Q ++ Y F+ VS+ R++ Sbjct: 442 EKTIKKIGVSADGVKTSDL-ALGSAFSPLSSELNDVLQLEIEHGYDEFLTKVSQGRHLSK 500 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN-YWF 260 + ++ G++W G+EA + L+D +G L ++ K + W Sbjct: 501 AQVDKIAQGQVWLGSEAIEHKLLDELGDLNTALGKAMELVNEKLDENSKIQEEGFSVEWL 560 Query: 261 CDLKNLSISSLLED 274 D + D Sbjct: 561 DDDSGSFFKKFMRD 574 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I+ + DD L++ L+ GG + E + +I+ K K VI Sbjct: 96 DVVYAIDSAALDDKVRGLVLDLNYFQGGDLPSLEFVGASIENFKKNGKQVIAYSDNYNR- 154 Query: 110 AGYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 A Y ++ ++ + V SI G++ + Y K LD L V+ + K+ PF Sbjct: 155 AQYFLASYADEVYMNPVGTV-SIDGLVQENLYYKDLLDSLEVNPHVFRVGTYKSAVEPFL 213 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 ++++ +A ++ + ++ + + V+E+RNI + + Sbjct: 214 RNDMSDEAKTNLRRWLGIMWNNYKQRVAENRNIKEEAVAPNA 255 >gi|229515373|ref|ZP_04404833.1| protease IV [Vibrio cholerae TMA 21] gi|229348078|gb|EEO13037.1| protease IV [Vibrio cholerae TMA 21] Length = 616 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 14/267 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D + + D + A+++ + SPGGSA+A E I Sbjct: 327 IAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + L+ Sbjct: 387 EIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGLNN 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ V ++P + + + A +Q ++ Y F+ LV+E R + L Sbjct: 447 LGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVDEL 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPKNYWFCDLKN 265 + GR+WT +A+ +GL+D +G ++ L +++ P + DL Sbjct: 506 AQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEPLTPAQQFLQDLLG 565 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 SL D L+ + +Q L W Sbjct: 566 QVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|226939994|ref|YP_002795067.1| SohB [Laribacter hongkongensis HLHK9] gi|226714920|gb|ACO74058.1| SohB [Laribacter hongkongensis HLHK9] Length = 312 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 29/298 (9%) Query: 8 IKTRYVMLSLVTLTVV--YFSWSSHVEDN-----SPHVARIAIRGQI----EDSQELIER 56 I R L+++ L + + SW + D+ PH A I I G I + ++++ + Sbjct: 29 IFFRLTWLAVILLVALPLFASWFGNSNDSLPAGGRPHAAVIDINGVINNENDSARKISDG 88 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYL 113 ++ +D + +I+ +SPGGS + I++ K P V+ V E+ AS Y Sbjct: 89 LKNAYKDPNTRGIILRANSPGGSPVLSGMAYDEIRRQKTLHPDIPVLVAVEEVCASGCYY 148 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I A + S+VGSIGVL + ++KLG+ + S K PFS P Sbjct: 149 IASAADKIFANQASIVGSIGVLSEGFGFTGAMEKLGIERRLATSGRDKGMGDPFSPQTPA 208 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V M Q+++D+ + F+ V + R L GR+W G++A +GLID + + + Sbjct: 209 QVSMRQELLDTIHGQFITAVRQGRGKRLKTGEDLFTGRVWVGSQAVPLGLIDGLSSVDAI 268 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + + D+ P + F + + D + GL W Sbjct: 269 ARE------QLDTDNVVDFTPKDS--FSSRLGKRLGMQIADGVR-------DGLSMRW 311 >gi|188994544|ref|YP_001928796.1| signal peptide peptidase SppA 67K type [Porphyromonas gingivalis ATCC 33277] gi|188594224|dbj|BAG33199.1| signal peptide peptidase SppA 67K type [Porphyromonas gingivalis ATCC 33277] Length = 595 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 15/287 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERI 60 L V+L+ V + + + +A + G+I + +QEL + I+ Sbjct: 286 LRFVSLSQVLANGPMN-KTKGSRIAVLFAEGEITEEIIKKPFDTDGSSITQELAKEIKAA 344 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + DD A+++ ++SPGGSA+ E I++ + +K +KP++ + ++AAS GY I+CA+N Sbjct: 345 ADDDDIKAVVLRVNSPGGSAFTSEQIWKQVADLKAKKPIVVSMGDVAASGGYYIACAANS 404 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA T+L GSIG+ +P K+GV++ V++S + F+ + + ++Q Sbjct: 405 IVAEHTTLTGSIGIFGMFPNFAGVAKKIGVNMDVVQTSKYADLGNTFAPMTVEDRALIQR 464 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ Y F+ VSE RN + ++ GR+W G +A +GL+D +GG + + L Sbjct: 465 YIEQGYDLFLTRVSEGRNRTKAQIDSIAQGRVWLGDKALALGLVDELGGLDTAIKRAAKL 524 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 I+ +N++ L + + ++ +++ L Sbjct: 525 AQLGGNYSIEYGKTKRNFFEELLSSSAADMKSAILSIILSDPEIEVL 571 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 87/203 (42%), Gaps = 8/203 (3%) Query: 54 IERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +E I + + + T + + L S G + E + RA+Q K + + G Sbjct: 87 VEAIGQAKNNPNITGIFLDLDNLSVG--MASAEELRRALQDFKMSGKFVVSYADRYTQKG 144 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SE 169 Y ++ ++ + ++G IG+ Q + K LDK GV ++ K KA PF + Sbjct: 145 YYLASIADKLYLNPKGMLGLIGIATQTMFYKDALDKFGVKMEIFKVGTYKAAVEPFMLNG 204 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW-TGAEAKKVGLIDVV 227 ++ + + ++ + ++ESR D + +D G ++ +A ++ L+D + Sbjct: 205 MSDANREQITTYINGLWDKITSDIAESRKTAMDSVKMFADKGEMFGLAEKAVEMKLVDEL 264 Query: 228 GGQEEVWQSLYALGVDQSIRKIK 250 + +V + L + +++ Sbjct: 265 AYRTDVEKELKKMSQRGEKDELR 287 >gi|284053896|ref|ZP_06384106.1| signal peptide peptidase A [Arthrospira platensis str. Paraca] gi|291565705|dbj|BAI87977.1| protease IV [Arthrospira platensis NIES-39] Length = 273 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 7/265 (2%) Query: 35 SPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI I G I D+++ + + + AL++ + SPGG+ + I+ A++ + Sbjct: 10 RKQIARIEISGAIAGDTRKRVLEALKTVEERKFPALLLRIDSPGGTVGDSQEIYSALKSL 69 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS K Sbjct: 70 RKKVKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSFK 129 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KS P K + E+ Q++Q+++D+SY FV V+ESRN+ + +DGRI+ Sbjct: 130 VIKSGPYKDILAFDRELTEPEQQILQELIDTSYQQFVSTVAESRNLEIEAVRSFADGRIF 189 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS--- 269 TG +A ++G+ID +G +E+ + + +D + PK+ L N + Sbjct: 190 TGEQALQLGVIDRLGSEEDARRWTAEMVNLDPDKTECCTLEKPKSLLNRVLSNNLAATNS 249 Query: 270 -SLLEDTIPLMKQTKVQGLWAVWNP 293 S + + T LW ++ P Sbjct: 250 ISDARNWVEFELGTSGLPLW-LYRP 273 >gi|121591501|ref|ZP_01678769.1| protease IV [Vibrio cholerae 2740-80] gi|121546642|gb|EAX56829.1| protease IV [Vibrio cholerae 2740-80] Length = 605 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D L+ + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|297579498|ref|ZP_06941426.1| protease IV [Vibrio cholerae RC385] gi|297537092|gb|EFH75925.1| protease IV [Vibrio cholerae RC385] Length = 616 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 18/288 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAIVIASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L+ LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQY 544 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ P + DL SL D L+ + +Q L W Sbjct: 545 NLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMESFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|254423418|ref|ZP_05037136.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7335] gi|196190907|gb|EDX85871.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. PCC 7335] Length = 286 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 129/251 (51%), Gaps = 5/251 (1%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I S + ++E ++ + AL++ + SPGG+ + I+ A++K Sbjct: 10 RKQIARIEISGAIAGSTRKRVLEALKEVEE-KKFPALLLRIDSPGGTVGDSQEIYSALRK 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I ++ IVA + GSIGV+ + ++ LDK+GVS Sbjct: 69 LQEKVKIVASYGNISASGGVYIGVGAHHIVANAGCITGSIGVILRGNNIEKLLDKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K VKS P K + + + ++Q+++D SY FVR V+E RN+P K +DGR+ Sbjct: 129 KVVKSGPYKDILAFDRPLTSEEETILQELIDVSYGQFVRTVAEGRNLPEAKVREFADGRV 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLK-NLSISS 270 +TG +A +G++D +G +E+ + L G+D + + K L N ++ Sbjct: 189 FTGEQALALGMVDRLGSEEDARRWAAELSGLDPEKAECFTFEEKKPLLSRVLPGNDALLG 248 Query: 271 LLEDTIPLMKQ 281 L +P Sbjct: 249 FLPAAMPATMA 259 >gi|315634116|ref|ZP_07889405.1| signal peptide peptidase SppA [Aggregatibacter segnis ATCC 33393] gi|315477366|gb|EFU68109.1| signal peptide peptidase SppA [Aggregatibacter segnis ATCC 33393] Length = 628 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 12/255 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAY 81 + + +A + + G I D + + + + D +++ ++SPGGSA+ Sbjct: 322 IGETDNKIAVVNVEGAIVDGESDEENAGGDTIAMLLRQAHDDKDVKGVVLRVNSPGGSAF 381 Query: 82 AGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + + K KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ P Sbjct: 382 ASEIIRQEVTHLQKAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFAVLPT 441 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + K+GVS VK+S + A S S ++ + ++Q ++ Y F+ VSE R++ Sbjct: 442 FENTIKKIGVSADGVKTSDL-ALGSLLSPLSAELNDVLQLEIEHGYDQFLTKVSEGRHLT 500 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN-YW 259 + ++ G++W G+EA L+D +G + L ++ + K + W Sbjct: 501 KAQVDKVAQGQVWLGSEALAHKLVDELGNLDTALGKAMELVNERRAEQEKIDESRFSVEW 560 Query: 260 FCDLKNLSISSLLED 274 D + I ++ D Sbjct: 561 MVDDERTLIKKIMRD 575 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 38/242 (15%) Query: 2 EFVLKKIKTRYVMLSL-VTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQE------- 52 + V+ + +V+L+L V +V V A + + G + D+++ Sbjct: 20 DLVMNIVFLIFVLLALSVFTLIVGADKQEKVVLKGDQGALLLQLDGYLADNRDAQSSFKS 79 Query: 53 ------------------LIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKV 93 +I I+ ++DD L++ L+ GG + E + AI+ Sbjct: 80 MLKELDNQRIAQQYSTFDVIYAIDAAAQDDKVKGLVLDLNYFQGGDLPSLEYVGEAIENF 139 Query: 94 KNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLG 149 K+ K VI S Y ++ ++ I +GS+ G+ + Y K LDKL Sbjct: 140 KDSGKQVIAYSDSYNQS-QYFLASYADEIYMNP---IGSVSIEGLAQETLYYKEMLDKLD 195 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V+ + K+ PF ++++P+A +Q +++ + + V+ +R+IP Sbjct: 196 VNPHVFRVGTYKSAVEPFLRNDMSPEARANLQRWLNTMWENYTAQVAINRDIPKALVTPT 255 Query: 208 SD 209 ++ Sbjct: 256 AN 257 >gi|327439223|dbj|BAK15588.1| periplasmic serine protease [Solibacillus silvestris StLB046] Length = 336 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 16/257 (6%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSP 76 D + +A + + G I+D E +E+++ + DD+ +++S+++P Sbjct: 53 ETGDLTNRIAHLTVDGVIQDVGEPSIWETVDYNHQLFMEQLDAVLEDDTIKGVVLSVNTP 112 Query: 77 GGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG E I++ + K+K K P+ + MAAS GY IS ++ I A ++ GSIGV Sbjct: 113 GGGVIESEEIYQKLLKIKEEKQIPIYVSMGSMAASGGYYISAPADKIFAQRETITGSIGV 172 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + Q + GV +++KS K + + M+Q+++D SY FV ++ Sbjct: 173 IMQSINYGKLAENFGVEFETIKSGEHKDMFGGVRPSTKEELAMLQEMIDESYEHFVDIIE 232 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 RN+ + ++DGR+ G +A + GL+D +G +E +L A + ++ ++ Sbjct: 233 AGRNMSEAQVKKVADGRVLGGTQALRAGLVDEIGNEEATVNALRADFGLED-AELFEYTM 291 Query: 255 PKNYWFCDLKNLSISSL 271 + W L S L Sbjct: 292 DTSSWGSLLGVKLGSML 308 >gi|24214825|ref|NP_712306.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|45657659|ref|YP_001745.1| endopeptidase IV [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195838|gb|AAN49324.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|45600899|gb|AAS70382.1| signal peptide peptidase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 328 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 26/282 (9%) Query: 34 NSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGS 79 N + I I G I D E + +++E D A+I+ ++SPGGS Sbjct: 46 NEDKILIIPIDGVISDEGEKNFFGGQEDSILVEVKKQLELAELDPEIKAVILKINSPGGS 105 Query: 80 AYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 A + I+R I + K +K PV++ + AAS Y IS A+++++A TS+ GSIGV+ Sbjct: 106 VTASDIIYREILQFKTKKKIPVVSLFMDTAASGAYYISMATDLLIAHPTSVTGSIGVILS 165 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 VK LDKLG+ +S++S K SP E++P+ +++Q +VD + F +V + R Sbjct: 166 GINVKEGLDKLGIKDQSIRSGGNKTIGSPLEELSPEQRKLLQSIVDDLFEKFFDIVKKGR 225 Query: 198 -NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS---------IR 247 + ++DGRI+T ++A + GLID +G + Q AL + I Sbjct: 226 PGKNPSELRKVADGRIFTASQALQHGLIDKIGYFDNAVQETMALSNYKKNPGNTNPRIIY 285 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + N N++ L S + + +Q + LW+ Sbjct: 286 YTRSTNQRTNFYQVQSTELKPDSTISKILGTSRQVRFLYLWS 327 >gi|303244900|ref|ZP_07331226.1| signal peptide peptidase SppA, 36K type [Methanothermococcus okinawensis IH1] gi|302484717|gb|EFL47655.1| signal peptide peptidase SppA, 36K type [Methanothermococcus okinawensis IH1] Length = 310 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 140/275 (50%), Gaps = 18/275 (6%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVED--NSPHVARIAIRGQIE---------------DS 50 I +++ ++ + ++ S ++ + + ++A I I ++ D Sbjct: 10 ILFILMIMVVIAIGLLLVPSSDNILNFKSEGNIAVINIDNELVLKNSGSSGLFGNNNPDV 69 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + I + + + A+++ ++ PGG A E + R +++V +KPV+ + + AS Sbjct: 70 NDYIGALNDAENNPNIKAILLKVNCPGGEVIASEKLARKVKEVSKKKPVVAYIETLGASG 129 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y+ +N IVA + S+VGSIGV + + KLG++ +K+ K SP+ + Sbjct: 130 AYMTIAPANYIVAEKHSIVGSIGVRMDVIHYYGLMKKLGINATVIKAGKYKDIGSPYRPM 189 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P+ ++ +++ +Y FV+ V+E+R++ ++TL ++GRI++G++AKKVGL+D VG + Sbjct: 190 TPEEKACLEKMINETYMDFVKWVAENRHMTINETLKAANGRIYSGSDAKKVGLVDAVGTE 249 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 E+ + + K +++ P K + + Sbjct: 250 EDAINITAKIANISN-PKTEEYTPSKPAGIFSMMS 283 >gi|127512869|ref|YP_001094066.1| signal peptide peptidase SppA, 67K type [Shewanella loihica PV-4] gi|126638164|gb|ABO23807.1| signal peptide peptidase SppA, 67K type [Shewanella loihica PV-4] Length = 613 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 18/267 (6%) Query: 22 VVYFSWSSHVEDNSP-----HVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + ++ + S ++ P V I +G I + + + + DD Sbjct: 306 ISFYDYQSVIQQFPPVLMHDAVGIIVAKGNILNGHQAAGQIGGESTSALLRKARFDDKVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I + + +K KPV+ + AAS GY IS +++ I A T Sbjct: 366 AVVLRVDSPGGSAFASEQIRQEVLALKAANKPVVVSMGTYAASGGYWISASADYIYATPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L +LG+ V +S A S ++ + +++Q ++ Y Sbjct: 426 TLTGSIGIFGMMTTFEDSLAELGIHTDGVSTSGWTAFSS-TQGISDELKEIIQRHIERGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LVSE R + ++ ++ GR+W+G A ++GL+D +G E+ L + Sbjct: 485 QDFISLVSEERGMKPEEVDKIAQGRVWSGKRALELGLVDELGDLEQAVTKAAELAKLEKF 544 Query: 247 --RKIKDWNPPKNYWFCDLKNLSISSL 271 + I+ P+ + + ++S + Sbjct: 545 DTKLIEQELSPQEQFIQQMFAQAVSYM 571 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 51/279 (18%) Query: 2 EFVLKKIKTRYVMLSLVTL-----------TVVYFSWSSHVEDNSPHVARIAI-----RG 45 + +L ++ L V L + + S +V + V I +G Sbjct: 24 KVILNLFFFGFIALLFVILAGEESPTVEEGSALVLDLSGNVVEQKRQVDPIEAAMKSGKG 83 Query: 46 QIEDSQ----ELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQKVKNR 96 D + +L+ I+ + D +AL++ + G ++I A+ + K Sbjct: 84 GQSDGEILLADLLNAIDNAASDKRISALVLDI----GHLRWTGISKLQSIGDALTRFKAS 139 Query: 97 -KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSI 152 KP+I + Y ++ ++ I GS+ G+ Y K LDKL + Sbjct: 140 GKPIIA-MGNWYGQNQYFLASFADTIYLNPQ---GSVEIEGLSRYRQYFKSALDKLKIKA 195 Query: 153 KSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD- 209 + K+ PF +++ A ++++ + F VSE+R I D ++ ++ Sbjct: 196 HVFRVGTFKSAVEPFMRDDMSEAAKSANRELLQDIWDSFEATVSENRGIKQDDLMLSAER 255 Query: 210 ---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 GR + A +G +D + E+ + Sbjct: 256 YLTELNKANGR--SSEMAINLGWVDKLASAEQFRLDMVE 292 >gi|242347949|ref|YP_002995510.1| peptidase family S49 family protein [Aeromonas hydrophila] gi|224831768|gb|ACN66899.1| peptidase family S49 family protein [Aeromonas hydrophila] Length = 319 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L ++ ++ + + +PH A I IRG+I D+ LI Sbjct: 34 LLRVLRASGFVLLMIGFIILASNPGGMPWQSTKAGAPHTAYINIRGEIAAGTLADADHLI 93 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ ++ K V + ++ AS G Sbjct: 94 PSIQAAFDNPNSQAVVLRINSPGGSPVQAGRIYEEVKALRALHPEKKVYAIIDDIGASGG 153 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A SLVGSIGV+ +DKLG+ +++ S KA PFS + Sbjct: 154 YYIASAADEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLT 213 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + V+ ++ F+ V R + G +W G +AK +GLID +G Sbjct: 214 SDMKTFWEGVLSKTHQQFIERVKAGRGDRLKDDQEVFSGLLWNGEQAKDIGLIDGLGSLN 273 Query: 232 EVWQSL 237 V + + Sbjct: 274 SVARDV 279 >gi|309796456|ref|ZP_07690864.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308119961|gb|EFO57223.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 325 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L ++ ++ + + +PH A I IRG+I D+ LI Sbjct: 40 MLRVLRASGFVLLMIGFIILASNPGGMPWQSAKAGAPHTAYINIRGEIAAGTLADADHLI 99 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ + K V + ++ AS G Sbjct: 100 PSIQAAFDNPNSQAVVLRINSPGGSPVQAGRIYEEVKAQRALHPEKKVYAIIDDIGASGG 159 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A SLVGSIGV+ +D+LG+ +++ S KA PFS + Sbjct: 160 YYIASAADEIYADRASLVGSIGVISSGFGFTGLMDRLGIERRAITSGEHKALLDPFSPLT 219 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + V+ ++ F+ V R + G +W G +AK++GLID +G Sbjct: 220 SDMKKFWEGVLSKTHQQFIERVKAGRGDRLKDAPEVFSGLLWNGEQAKEIGLIDGLGSLN 279 Query: 232 EVWQSL 237 V + + Sbjct: 280 SVARDV 285 >gi|262089779|gb|ACY24872.1| SppA signal peptide peptidase 67K type [uncultured organism] Length = 590 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 125/254 (49%), Gaps = 12/254 (4%) Query: 35 SPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 VA + G I D S+ ++E + ++ DD+ AL++ + S GGSA+A E Sbjct: 295 KNKVAVVVASGSIVDGHQPDGSIGSESMLELLRQVKDDDAIKALVIRIDSGGGSAFASEI 354 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + ++ +K P+ + +AAS GY I+ A + I A T++ GSIGV +P ++ Sbjct: 355 IRSEVIALREKKIPIYISMGTVAASGGYWIATAGDKIWAQPTTITGSIGVFGAFPTLEKS 414 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+G++ V ++ + ++ KA +++Q VD+ Y F+ LV+++R Sbjct: 415 LQKIGINTDGVGTTELAGSMRLDRPLSEKASKVVQMGVDNIYQRFITLVADARKQEVKAI 474 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ G +WTG +AK++GL+D +G +V ++ + ++ PK Sbjct: 475 DEIAQGHVWTGNKAKEIGLVDELGTLNDVITAIAQEAKLGSYKVEFVQRPLSPKEELLRS 534 Query: 263 LKNLSISSLLEDTI 276 L + + ++ Sbjct: 535 LTQGHAGTFVPTSL 548 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 83/211 (39%), Gaps = 23/211 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPG----GSAYAGEAIFRAIQKVK-NRKPVITEVHEM 106 +++E I ++D L++ PG G I +A++ K K +I Sbjct: 66 DVVEAINNAAKDKRVAMLVLE---PGRLLGGGVSKMNDIGQALENFKGAGKKIIAVSDNY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + Y ++ ++ I + L+ G Y K LDKLGV+I + +S K P Sbjct: 123 SQD-QYYLASFADEIYLHDMGLIEITGYGRYMNYYKTALDKLGVTIHAFRSGKYKDYLEP 181 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY----------DKTLVLSDGRIWT 214 + +++ ++ + ++ + + + R +P D ++L+ G + Sbjct: 182 YLRDDMSEESREHNAQWINELWASYTGKIESLRKLPPGSINDYVNNIDAHMLLTTGD--S 239 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 A + L+D + ++++ + L Sbjct: 240 AKLALEKALVDKIVSRQDMEKMLIEQAGKSE 270 >gi|165937987|ref|ZP_02226547.1| peptidase [Yersinia pestis biovar Orientalis str. IP275] gi|165914010|gb|EDR32627.1| peptidase [Yersinia pestis biovar Orientalis str. IP275] gi|327536450|gb|AEA95283.1| peptidase-like protein [Salmonella enterica subsp. enterica serovar Dublin] Length = 319 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L ++ ++ + + +PH A I IRG+I D+ LI Sbjct: 34 MLRVLRASGFVLLMIGFIILASNPGGMPWQSAKAGAPHTAYINIRGEIAAGTLADADHLI 93 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ + K V + ++ AS G Sbjct: 94 PSIQAAFDNPNSQAIVLRINSPGGSPVQAGRIYDEVKAQRALHPEKKVYAIIDDIGASGG 153 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A SLVGSIGV+ +DKLG+ +++ S KA PFS + Sbjct: 154 YYIASAADEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLT 213 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + V+ ++ F+ V R + G +W G +AK +GLID +G Sbjct: 214 SDMKKFWEGVLSKTHQQFIERVKAGRGDRLKDDPEVFSGLLWNGEQAKDIGLIDGLGSLN 273 Query: 232 EVWQSL 237 V + + Sbjct: 274 SVARDV 279 >gi|15607864|ref|NP_215238.1| protease IV SppA [Mycobacterium tuberculosis H37Rv] gi|31791910|ref|NP_854403.1| protease IV SppA [Mycobacterium bovis AF2122/97] gi|121636646|ref|YP_976869.1| putative protease IV sppA (endopeptidase IV) [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660499|ref|YP_001282022.1| hypothetical protein MRA_0732 [Mycobacterium tuberculosis H37Ra] gi|148821929|ref|YP_001286683.1| protease IV sppA [Mycobacterium tuberculosis F11] gi|224989118|ref|YP_002643805.1| putative protease IV [Mycobacterium bovis BCG str. Tokyo 172] gi|253797667|ref|YP_003030668.1| protease IV sppA [Mycobacterium tuberculosis KZN 1435] gi|254231044|ref|ZP_04924371.1| protease IV sppA [Mycobacterium tuberculosis C] gi|254363670|ref|ZP_04979716.1| protease IV sppA [Mycobacterium tuberculosis str. Haarlem] gi|289442125|ref|ZP_06431869.1| signal peptide peptidase SppA, 67K type [Mycobacterium tuberculosis T46] gi|289552981|ref|ZP_06442191.1| protease IV sppA [Mycobacterium tuberculosis KZN 605] gi|289573332|ref|ZP_06453559.1| protease IV sppA [Mycobacterium tuberculosis K85] gi|289744448|ref|ZP_06503826.1| protease IV sppA [Mycobacterium tuberculosis 02_1987] gi|298524215|ref|ZP_07011624.1| protease IV [Mycobacterium tuberculosis 94_M4241A] gi|308371742|ref|ZP_07426068.2| protease IV sppA [Mycobacterium tuberculosis SUMu004] gi|1806192|emb|CAB06448.1| POSSIBLE PROTEASE IV SPPA (ENDOPEPTIDASE IV) (SIGNAL PEPTIDE PEPTIDASE) [Mycobacterium tuberculosis H37Rv] gi|31617497|emb|CAD93607.1| POSSIBLE PROTEASE IV SPPA (ENDOPEPTIDASE IV) (SIGNAL PEPTIDE PEPTIDASE) [Mycobacterium bovis AF2122/97] gi|121492293|emb|CAL70760.1| Possible protease IV sppA (endopeptidase IV) [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600103|gb|EAY59113.1| protease IV sppA [Mycobacterium tuberculosis C] gi|134149184|gb|EBA41229.1| protease IV sppA [Mycobacterium tuberculosis str. Haarlem] gi|148504651|gb|ABQ72460.1| putative protease IV [Mycobacterium tuberculosis H37Ra] gi|148720456|gb|ABR05081.1| protease IV sppA [Mycobacterium tuberculosis F11] gi|224772231|dbj|BAH25037.1| putative protease IV [Mycobacterium bovis BCG str. Tokyo 172] gi|253319170|gb|ACT23773.1| protease IV sppA [Mycobacterium tuberculosis KZN 1435] gi|289415044|gb|EFD12284.1| signal peptide peptidase SppA, 67K type [Mycobacterium tuberculosis T46] gi|289437613|gb|EFD20106.1| protease IV sppA [Mycobacterium tuberculosis KZN 605] gi|289537763|gb|EFD42341.1| protease IV sppA [Mycobacterium tuberculosis K85] gi|289684976|gb|EFD52464.1| protease IV sppA [Mycobacterium tuberculosis 02_1987] gi|298494009|gb|EFI29303.1| protease IV [Mycobacterium tuberculosis 94_M4241A] gi|308335656|gb|EFP24507.1| protease IV sppA [Mycobacterium tuberculosis SUMu004] gi|326905054|gb|EGE51987.1| protease IV sppA [Mycobacterium tuberculosis W-148] gi|328457448|gb|AEB02871.1| protease IV sppA [Mycobacterium tuberculosis KZN 4207] Length = 623 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 328 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 387 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 388 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 447 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 448 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 507 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 508 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 567 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 568 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 603 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 77 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 133 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 134 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 193 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 194 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 253 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 254 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 305 >gi|323488441|ref|ZP_08093688.1| signal peptide peptidase SppA, 36K type [Planococcus donghaensis MPA1U2] gi|323397948|gb|EGA90747.1| signal peptide peptidase SppA, 36K type [Planococcus donghaensis MPA1U2] Length = 337 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 130/269 (48%), Gaps = 19/269 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 D + VA + + G I+D+ + +E++E I D S A++++++SPG Sbjct: 56 GDFNNRVAVLNVDGVIQDTGDAASFFGTTGYNHSFFMEQLENIKEDASVKAVVLAVNSPG 115 Query: 78 GSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I+ I +++ KP + +AAS GY I+ + I E +L GSIGV+ Sbjct: 116 GGVVESAEIYDKITEIQEETGKPFYVSMGAIAASGGYYIAAPAEKIFVNEETLTGSIGVI 175 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q ++ GV ++KS P K SP ++ ++Q+++D SY FV ++ E Sbjct: 176 MQSVNYGELAERYGVDFVTIKSGPYKDIMSPTRDMTEDERALLQEMLDDSYESFVDVIEE 235 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R++ ++ ++DGRI G +A +V L D G +E+V + + D + + + Sbjct: 236 GRSMTEEEVKAVADGRIMNGRQAVEVNLADDFGFEEDVIEQ---IKTDFDLGNAEVFQYG 292 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + + L ++ ++S + + +K+ Sbjct: 293 NDQGWGSLLSMKVNSFFGNDLETQMISKL 321 >gi|262393686|ref|YP_003285540.1| protease IV [Vibrio sp. Ex25] gi|262337280|gb|ACY51075.1| protease IV [Vibrio sp. Ex25] Length = 616 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 13/257 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D Q+ + + + D+ A+++ + SPGGSA+A E I Sbjct: 327 IAVVLASGAIMDGQQPRGTVGGDTVASLLRQARNDEKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + K Sbjct: 387 EVEALKQAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGFSK 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG++ V +SP + + ++ A Q+ Q ++ Y F+ LV E+R++ ++ + Sbjct: 447 LGINTDGVGTSPFSGDG-ITTGLSDGASQVFQLGIEHGYKRFISLVGENRDMSLEEVDNV 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKN 265 + GR+WTG +A GL+D +G ++ + L D I +++ P + + Sbjct: 506 AQGRVWTGQDALSFGLVDQMGDFDDAVELAAKLANVTDYGIYWVEEPLSPTELFLQEFMK 565 Query: 266 LSISSLLEDTIPLMKQT 282 SL D L+ ++ Sbjct: 566 QVKVSLGIDATSLLPKS 582 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 103/283 (36%), Gaps = 60/283 (21%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ---------- 51 I+ L + + V++ ++ D P V + + G I + + Sbjct: 21 FIRLALANLIFLLMIAVFYFAFTYTGDGQPVVEKESALVMNLSGPIVEQRRYVNPMDSFA 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D + L+++L P + I +A+ + K Sbjct: 81 GSLLGNELPKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KPV S Y ++ ++ + A GVL + Y K L+KL Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKVYLAPDG-----GVLIKGYSAYSMYYKTLLEKLD 194 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP------- 200 VS + K+ PF +++ A + V + FV V+ +RNI Sbjct: 195 VSTHVFRVGTYKSAIEPFIRDDMSDAAKESATRWVTQLWSAFVDDVTTNRNIDAKVLNPT 254 Query: 201 ----YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D+ + DG A K+GL+D + +++ ++L+A Sbjct: 255 MDELIDEMKSV-DGD--LAQLAVKLGLVDELATRQD-IRTLFA 293 >gi|289446284|ref|ZP_06436028.1| protease IV sppA [Mycobacterium tuberculosis CPHL_A] gi|289419242|gb|EFD16443.1| protease IV sppA [Mycobacterium tuberculosis CPHL_A] Length = 613 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 328 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 387 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 388 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 447 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 448 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 507 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 508 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 567 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 568 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 603 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 77 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 133 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 134 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 193 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 194 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 253 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 254 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 305 >gi|319792205|ref|YP_004153845.1| peptidase s49 [Variovorax paradoxus EPS] gi|315594668|gb|ADU35734.1| peptidase S49 [Variovorax paradoxus EPS] Length = 343 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 16/276 (5%) Query: 14 MLSLVTLTVVYFSWSS-HVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSAT 67 + + L S S+ + H A + I+G+I ++ ++ ++ D+ A Sbjct: 68 LAFFIFLAWFALSRSTPSTAKTTAHTAVVEIKGEIAAGGDASAEFVVAAMKTAFEDEGAK 127 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAE 125 +++ ++SPGGS I I+++K +KPV V E ASA Y I+ ++ I + Sbjct: 128 GVVLLINSPGGSPVQAGIINDEIKRLKAKHKKPVYAVVEETCASAAYYIAAGADKIFVDK 187 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S+VGSIGVL +DK+GV + + + K PFS ++ Q +++ Sbjct: 188 ASIVGSIGVLMDGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSDAQRAHAQTMLNQI 247 Query: 186 YHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + F+ +V R T L G W+G +A + GL D +G + V + + Sbjct: 248 HAQFINVVKTGRGDRLKLDTPGLFSGLFWSGEQAVEYGLADQLGNVDFVAREVI------ 301 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 ++ D+ ++ L +++ E ++ ++ Sbjct: 302 KAEEVIDYT-RRDNVAEKLAKKFGAAMGEASVRSLQ 336 >gi|91793256|ref|YP_562907.1| signal peptide peptidase SppA, 67K type [Shewanella denitrificans OS217] gi|91715258|gb|ABE55184.1| signal peptide peptidase SppA, 67K type [Shewanella denitrificans OS217] Length = 613 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 14/268 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I +G I + + E + ++ DD AL++ + SPGGSA+A E Sbjct: 324 KDAVGIIVAKGNILNGHQQAGDIGGESTSELLRKVRFDDKIKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + ++ KPV+ + MAAS GY IS +++ I A T+L GSIG+ + + Sbjct: 384 IRQEVLAIQAAGKPVVVSMGSMAASGGYWISASADYIYATPTTLTGSIGIFGMFATFEEA 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L ++G++ V +S S +N ++Q ++ YH F+ LV+ RN+ ++ Sbjct: 444 LAQIGINSDGVATSDWAG-LSVARPLNSNVEAVIQRHIERGYHEFISLVATERNMTLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI-RKIKDWNPPKNYWFCDL 263 ++ GR+WTG +A ++GL+D +G + L + K+ + F Sbjct: 503 DAIAQGRVWTGKKALELGLVDEIGDMDIAVAKAAELAKMSTFDTKLIEQELTPEQLFVQQ 562 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVW 291 ++ L ++ K + ++ L A W Sbjct: 563 VFSVTAAYLPQSLQ--KTSVMETLLAQW 588 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 105/303 (34%), Gaps = 56/303 (18%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDN----SPHVA-RIAIRGQIEDSQELIERIERISR-- 62 TR ++L+L+ +++ + + + P A + + G I D + +E +E Sbjct: 22 TRKLILNLIFFSLLALIAVALLSEEAIVIEPDSALVLNLSGAIVDQKHFVEPLEAALNKG 81 Query: 63 -----------------------DDSATALIVS---LSSPGGSAYAGEAIFRAIQKVKNR 96 D +++ L S S AI A+ + K Sbjct: 82 DEDNPNTEILLADILYVIHNATQDKRIKTIVLDLANLHSA--SVSKMTAIGDALNEFKAT 139 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSV 155 + Y ++ ++ I +V S+ L +Y Y K L+KL ++ Sbjct: 140 GKTVVAHGNYFNQNQYFLASYASKIYLNNQGMV-SLDGLSRYRLYYKSALEKLKINTHVF 198 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--------- 204 + K+ PF +++ ++ + + +VS++R I D Sbjct: 199 RVGTFKSAVEPFIRDDMSEADKASSNALLSDIWSSYSHIVSQNRGISPDALVLSPERYLS 258 Query: 205 -LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L ++G + A + +D + E+ + L + SI KD + F D Sbjct: 259 ELDTNEGD--SAKMALTMKWVDELVSAED-----FRLAMIASIGAAKDAQHFRQVKFADY 311 Query: 264 KNL 266 +L Sbjct: 312 LSL 314 >gi|258624166|ref|ZP_05719116.1| Periplasmic serine protease [Vibrio mimicus VM603] gi|258583597|gb|EEW08396.1| Periplasmic serine protease [Vibrio mimicus VM603] Length = 319 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L ++ ++ + + +PH A I IRG+I D+ LI Sbjct: 34 MLRVLRASGFVLLMIGFIILASNPGGMPWQSAKAGAPHTAYINIRGEIAAGTLADTDHLI 93 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ + K V + ++ AS G Sbjct: 94 PSIQAAFDNPNSQAIVLRINSPGGSPVQAGRIYDEVKAQRALHPEKKVYAIIDDIGASGG 153 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A SLVGSIGV+ +DKLG+ +++ S KA PFS + Sbjct: 154 YYIASAADEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLT 213 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + V+ ++ F+ V R + G +W G +AK +GLID +G Sbjct: 214 SDMKKFWEGVLSKTHQQFIERVKAGRGDRLKDDPEVFSGLLWNGEQAKDIGLIDGLGSLN 273 Query: 232 EVWQSL 237 V + + Sbjct: 274 SVARDV 279 >gi|238897852|ref|YP_002923531.1| protease IV, a signal peptide peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465609|gb|ACQ67383.1| protease IV, a signal peptide peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 614 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 128/269 (47%), Gaps = 14/269 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDS 65 + +++ N +A I + G I D ++ I + + Sbjct: 306 FNFISIYEYNLKLKIDPTKNDHQIAVIFVNGMITDGLKTPNNVGGEDAAYEIRQARLNPK 365 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ ++SPGGS A E I + + + +KP++ + + AS GY IS ++ I+A+ Sbjct: 366 IKAVILRVNSPGGSVSASELIRSELATLHEAKKPLVVSMGGLGASGGYWISTPADYIIAS 425 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++L GSIG+ + L +GVS V +SP+ S ++P+ ++MQ V++ Sbjct: 426 PSTLTGSIGIFGVINTFENSLKSIGVSTDGVSTSPLSDI-SITKNLSPEFSKIMQMNVEN 484 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 Y FV+LV+ +R+ + ++ GR+WTG +AK GLID +G ++ + L Sbjct: 485 GYKTFVKLVAAARHQDPKQIDSIAQGRVWTGLDAKNNGLIDQLGDFDDAVEKAAELA--- 541 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +++ + + F D+ I++ L Sbjct: 542 NLKNYQLYQFGDQLNFRDMLFDQINAALP 570 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 87/208 (41%), Gaps = 27/208 (12%) Query: 52 ELIERIERISRDDSATALIVS------LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVH 104 ++++ + + D++ L++S + P + + I +A+ + + KP+ + Sbjct: 97 DIVDMLRQAKVDNNINGLVLSLSHLIAIDQP-----SLQYIGKALLEFRETGKPIYA-IG 150 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSVKSSPMKAE 163 + Y ++ +N I + V I + Y K +DKL ++ + K+ Sbjct: 151 DSYTQEQYYLASFANKIYLSPQGTV-DIHGFATHQLYYKSLIDKLKINSHIFRVGTYKSA 209 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK----TLVL-----SDGRI 212 PF +++P A + Q + + ++ +V+++R++ ++ L ++G Sbjct: 210 VEPFMRDDMSPDAREADQRWIHQLWRNYLEVVAKNRHLTAEQFFPAIPELLSRLEANGGN 269 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 T A +D + + EV + L + Sbjct: 270 -TAQYALNNKWVDQLASRSEVEKELVRV 296 >gi|153833866|ref|ZP_01986533.1| signal peptide peptidase SppA, 67K type [Vibrio harveyi HY01] gi|148869808|gb|EDL68782.1| signal peptide peptidase SppA, 67K type [Vibrio harveyi HY01] Length = 616 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 13/266 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 ++ + +A + G I D Q+ + + + DD A+++ + SPGGS Sbjct: 318 PNLTPSENDIAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSPGGS 377 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 378 AFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVI 437 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+S V +SP + + ++ A Q Q ++ Y F+ LV +R+ Sbjct: 438 TTFEKGFTKLGISTDGVGTSPFSGDG-ITTGLSDGASQAFQLGIEHGYKRFISLVGSNRD 496 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPK 256 + D+ ++ GR+WTG +A GL+D +G ++ + L ++ +++ P Sbjct: 497 MSLDEVDKVAQGRVWTGQDAMSFGLVDQMGDFDDAVKLAAKLADVENYELYWVEEPLSPT 556 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQT 282 + + N SL D + ++ Sbjct: 557 EQFVQEFMNQVKVSLGIDATSFLPKS 582 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 103/288 (35%), Gaps = 60/288 (20%) Query: 4 VLKKIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ---- 51 + K I + L+ + + V++ ++ + P V + + G I + + Sbjct: 15 IWKAITFVRLALANLIFLVMIAVFYFAFTYTGEGQPTVEKESALVMNLSGPIVEQRRYVN 74 Query: 52 ---------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRA 89 ++++ I D + L+++L P + I +A Sbjct: 75 PMDSIAGSVLGNEMPKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKA 134 Query: 90 IQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKP 143 + + K KPV S Y ++ ++ + A GVL + Y K Sbjct: 135 LNEFKTSGKPVYAVGDFYNQS-QYYLASYADKVFLAPDG-----GVLIKGYSSYSMYYKT 188 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L+KL VS + K+ PF +++ A + + + FV V+ +RNI Sbjct: 189 LLEKLDVSTHVFRVGTYKSAIEPFIRDDMSDAAKESATRWITQLWSAFVDDVATNRNIDT 248 Query: 202 DKT-----LVLS-----DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +L+ DG A K+GL+D + +++V + Sbjct: 249 KALNPTMDELLAEMKSVDGD--LAQLAVKMGLVDELATRQDVRKLFAK 294 >gi|68249944|ref|YP_249056.1| protease IV [Haemophilus influenzae 86-028NP] gi|68058143|gb|AAX88396.1| protease IV [Haemophilus influenzae 86-028NP] Length = 615 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 117/295 (39%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ + +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKFTALFGKGSDGKANLIE 303 >gi|301170278|emb|CBW29884.1| protease IV (signal peptide peptidase) [Haemophilus influenzae 10810] Length = 615 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDDENSGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 95.2 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 113/295 (38%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLTGDGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFQGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFHVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLAALFGKGSDGKANLIE 303 >gi|157375448|ref|YP_001474048.1| acid phosphatase [Shewanella sediminis HAW-EB3] gi|157317822|gb|ABV36920.1| Acid phosphatase [Shewanella sediminis HAW-EB3] Length = 612 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 20/286 (6%) Query: 22 VVYFSWSSHVEDN-----SPHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + +F + S + + V I +G I + + + + + D+ Sbjct: 306 IDFFDYQSLIATHPSLLIEDTVGIIVAKGTILNGNQPAGQIGGESTSKLLRKARFDEQVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I + + +K KPV+ + AAS GY IS +++ I A T Sbjct: 366 AVVLRVDSPGGSAFASEQIRQEVLALKTAGKPVVVSMGSYAASGGYWISASADYIYATPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L +G+ V +S S + P+ ++Q ++ Y Sbjct: 426 TLTGSIGIFGMVTTFEDSLSSIGIHTDGVATSDWAGI-SVTKGLTPEIKSVIQRHIERGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 H F+ LV+ R + D ++ GR+W+G +A ++GL+D +G + + + Sbjct: 485 HDFISLVATERGMSLDDVDNIAQGRVWSGKKAVELGLVDELGDLDSAVAKAAKMANLEDF 544 Query: 247 R-KIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 +I + F S ++ L + T ++ L + W Sbjct: 545 DSQIIEQELSPQELFIQEMFASAAAYLPQSS---TSTVLEQLLSQW 587 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 125/324 (38%), Gaps = 64/324 (19%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ------------- 51 ++K+ ++ +V + V+ +S + + G + + + Sbjct: 22 IRKLILNIFFFGILAAIIVAMTVEDDVKLDSGSALVLNLSGSVVEQKRQVDPIEAAMKSS 81 Query: 52 ------------ELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQKVK 94 +++ I+ + D +++++ + G ++I A+ + K Sbjct: 82 KSKDASGELLLADVLNVIDNAALDTRISSIVLDI----GHLRWTGISKLQSIGDALTRFK 137 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGV 150 KP+I + + + Y ++ ++ I GS+ G+ Y K L+KL + Sbjct: 138 ESGKPIIAKANWYGQN-QYFLASFADTIYLNPQ---GSVELEGLSRYRQYYKSALEKLKI 193 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---- 204 + K+ P+ +++P A + ++++ + + V+E+RNI DK Sbjct: 194 KAHIFRVGTFKSAVEPYIRDDMSPAAKEANTELLNDIWANYETQVAENRNISADKLVLSA 253 Query: 205 ------LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L ++G+ + A + +D + + L + ++ K + N K Sbjct: 254 DQYLIELERANGK--SAEMALNMNWVDEL-----ASAEAFRLKMIDTVGKADEGNSFKQI 306 Query: 259 WFCDLKNLSI---SSLLEDTIPLM 279 F D ++L S L+EDT+ ++ Sbjct: 307 DFFDYQSLIATHPSLLIEDTVGII 330 >gi|147918877|ref|YP_687397.1| putative protease IV [uncultured methanogenic archaeon RC-I] gi|110622793|emb|CAJ38071.1| putative protease IV [uncultured methanogenic archaeon RC-I] Length = 299 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 22/267 (8%) Query: 13 VMLSLVTLTVVYFSWSSHVE---------DNSPHVARIAIRG-QIED------------S 50 ++ L+ +Y + S ++ D+ VA + I G I D S Sbjct: 30 IVTVLIAGVGLYLVFGSGIKGDLKEMLGLDHDNKVAVVYIEGKMIADKSNDPTDDGAAFS 89 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 E++ I + + DDS A+++ ++SPGG+ A E I I + K +KPVI + + A SA Sbjct: 90 SEVVRAIRKATADDSIKAIVLRVNSPGGTPVAAEEIIAQINRTKAKKPVIVSMGDSATSA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y +S +++ I A + GSIGV++ + + ++ G++ KS K + + + Sbjct: 150 AYYVSASADKIFANPDTFTGSIGVIWVFKNKTRYYNEEGINFYIAKSGNYKDVGADWRGL 209 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +Q +++ SY FV V+ RN+P ++ ++DGR+ TG AK +GL+D +GG Sbjct: 210 SENEKSYIQSIINESYERFVTAVATGRNLPENQIRAIADGRVMTGTSAKSMGLVDEIGGL 269 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKN 257 + + LG + I N P + Sbjct: 270 YDAIEYAAKLGGIKGEPVIVHMNEPGS 296 >gi|156975314|ref|YP_001446221.1| protease [Vibrio harveyi ATCC BAA-1116] gi|156526908|gb|ABU71994.1| hypothetical protein VIBHAR_03044 [Vibrio harveyi ATCC BAA-1116] Length = 616 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 13/266 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 ++ + +A + G I D Q+ + + + DD A+++ + SPGGS Sbjct: 318 PNLAPSENDIAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSPGGS 377 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 378 AFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVI 437 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + KLG+S V +SP + + ++ A Q Q ++ Y F+ LV +R+ Sbjct: 438 TTFEKGFTKLGISTDGVGTSPFSGDG-ITTGLSDGASQAFQLGIEHGYKRFISLVGSNRD 496 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPK 256 + D+ ++ GR+WTG +A GL+D +G ++ + L ++ +++ P Sbjct: 497 MSLDEVDKVAQGRVWTGQDAMSFGLVDQMGDFDDAVKLAAKLADVENYELYWVEEPLSPT 556 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQT 282 + + N SL D + ++ Sbjct: 557 EQFVQEFMNQVKVSLGIDATSFLPKS 582 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 103/275 (37%), Gaps = 58/275 (21%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ----------------- 51 ++ LV + V YF++ ++ ++ P V + + G I + + Sbjct: 29 LIFLVMIAVFYFAF-TYTGESQPTVEKESALVMNLSGPIVEQRRYVNPMDSIAGSVLGNE 87 Query: 52 --------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVIT 101 ++++ I D + L+++L P + I +A+ + K KPV Sbjct: 88 MPKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKALNEFKTSGKPVYA 147 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVK 156 S Y ++ ++ + A GVL + Y K L+KL VS + Sbjct: 148 VGDFYNQS-QYYLASYADKVFLAPDG-----GVLIKGYSSYSMYYKTLLEKLDVSTHVFR 201 Query: 157 SSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-----LVLS- 208 K+ PF +++ A + + + FV V+ +RNI +L+ Sbjct: 202 VGTYKSAIEPFIRDDMSDAAKESATRWITQLWSAFVDDVATNRNIDAKALNPTMDELLAE 261 Query: 209 ----DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 DG A K+GL+D + +++V + Sbjct: 262 MKSVDGD--LAQLAVKMGLVDELATRQDVRKLFAK 294 >gi|257878473|ref|ZP_05658126.1| protease/peptidase [Enterococcus faecium 1,230,933] gi|257812701|gb|EEV41459.1| protease/peptidase [Enterococcus faecium 1,230,933] Length = 341 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++++ G I + + +E+++ I D + + + ++SPGG Sbjct: 55 GDSTQKIVKLSVDGTIAAGGSSGLFASEGYNHKNFMEQLKAIEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FV +VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEEAVLQAYIDSAYSRFVAIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN ++ ++DGRI+ G +AK+VGL+D +G E+ +++ + ++ + P Sbjct: 235 RNKSEEEVKKIADGRIYDGVQAKEVGLVDELGFPEDALKAIRKEQQLEDAELVEYSSTPS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|229847143|ref|ZP_04467248.1| protease IV [Haemophilus influenzae 7P49H1] gi|229809972|gb|EEP45693.1| protease IV [Haemophilus influenzae 7P49H1] Length = 615 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 116/295 (39%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLTGDGALLLNLDGYLADNRDEILRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ + +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKFTALFGKGSDGKANLIE 303 >gi|257882895|ref|ZP_05662548.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257889327|ref|ZP_05668980.1| protease/peptidase [Enterococcus faecium 1,231,410] gi|257894340|ref|ZP_05673993.1| protease/peptidase [Enterococcus faecium 1,231,408] gi|258616002|ref|ZP_05713772.1| protease/peptidase protein [Enterococcus faecium DO] gi|260560062|ref|ZP_05832240.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261207449|ref|ZP_05922135.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289565860|ref|ZP_06446301.1| signal peptide peptidase sppA [Enterococcus faecium D344SRF] gi|293559811|ref|ZP_06676329.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1162] gi|294623410|ref|ZP_06702266.1| putative protease [Enterococcus faecium U0317] gi|314939698|ref|ZP_07846922.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a04] gi|314942226|ref|ZP_07849078.1| signal peptide peptidase SppA [Enterococcus faecium TX0133C] gi|314948859|ref|ZP_07852229.1| signal peptide peptidase SppA [Enterococcus faecium TX0082] gi|314950801|ref|ZP_07853873.1| signal peptide peptidase SppA [Enterococcus faecium TX0133A] gi|314992218|ref|ZP_07857658.1| signal peptide peptidase SppA [Enterococcus faecium TX0133B] gi|314995223|ref|ZP_07860336.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a01] gi|257818553|gb|EEV45881.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257825687|gb|EEV52313.1| protease/peptidase [Enterococcus faecium 1,231,410] gi|257830719|gb|EEV57326.1| protease/peptidase [Enterococcus faecium 1,231,408] gi|260073897|gb|EEW62221.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260078340|gb|EEW66045.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289162320|gb|EFD10179.1| signal peptide peptidase sppA [Enterococcus faecium D344SRF] gi|291597176|gb|EFF28371.1| putative protease [Enterococcus faecium U0317] gi|291606230|gb|EFF35646.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1162] gi|313590553|gb|EFR69398.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a01] gi|313593218|gb|EFR72063.1| signal peptide peptidase SppA [Enterococcus faecium TX0133B] gi|313597016|gb|EFR75861.1| signal peptide peptidase SppA [Enterococcus faecium TX0133A] gi|313598998|gb|EFR77843.1| signal peptide peptidase SppA [Enterococcus faecium TX0133C] gi|313641033|gb|EFS05613.1| signal peptide peptidase SppA [Enterococcus faecium TX0133a04] gi|313644732|gb|EFS09312.1| signal peptide peptidase SppA [Enterococcus faecium TX0082] Length = 341 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++++ G I + + +E+++ I D + + + ++SPGG Sbjct: 55 GDSTQKIVKLSVDGTIAAGGSSGLFASEGYNHKNFMEQLKAIEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FV +VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEEAVLQAYIDSAYSRFVAIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN ++ ++DGRI+ G +AK+VGL+D +G E+ +++ + ++ + P Sbjct: 235 RNKSEEEVKKIADGRIYDGVQAKEVGLVDELGFPEDALKAIRKEQQLEDAELVEYSSTPS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|257898289|ref|ZP_05677942.1| protease/peptidase [Enterococcus faecium Com15] gi|257836201|gb|EEV61275.1| protease/peptidase [Enterococcus faecium Com15] Length = 341 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 25/267 (9%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++ + G I + + +E+++ + D + + + ++SPGG Sbjct: 55 GDSTQKIVKLTVDGTIAAGGSSGLFASEGYNHENFMEQLKAVEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FVR+VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEEAVLQAYIDSAYQRFVRIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK------ 250 RN + ++DGRI+ G +AK+VGL+D +G E+ Q++ + ++ Sbjct: 235 RNKSEEAVKKIADGRIYDGVQAKEVGLVDELGFPEDALQAMRKEQKLEDAELVEYSSASS 294 Query: 251 ----DWNPPKNYWFCDLKNLSISSLLE 273 W K F LK+ S +L Sbjct: 295 GFASTWLGSKLAEFQGLKSSETSQILS 321 >gi|159903808|ref|YP_001551152.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9211] gi|159888984|gb|ABX09198.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9211] Length = 269 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 128/263 (48%), Gaps = 3/263 (1%) Query: 33 DNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + +ARI I G I D+++L + + + AL+V + SPGG+ + I A+ Sbjct: 8 KSKKRMARIIIDGAINGDTRKLFLKAVKQVEEREFPALLVRIDSPGGTVGDSQEIHAALL 67 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ V+ ++AS G + A+ IVA ++ GSIGV+ + + L+K+G+ Sbjct: 68 RLRESGCHVVASFGNISASGGVYVGVAAEKIVANPGTITGSIGVILRGNNLSKLLEKIGI 127 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++VKS K SP ++ + +++Q ++DSSY FV V++ R + + +DG Sbjct: 128 KFETVKSGLYKDILSPDRALSKEERELLQSLIDSSYGQFVEAVAKGRGLSEEVVRGFADG 187 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R++TG +A+++GL+D +G + L + PK L +I Sbjct: 188 RVFTGTQARELGLVDELGDENHAKLLAAKLADLDEKLQPITLGRPKKKLLGLLPGGNILR 247 Query: 271 LLEDTIPLMKQTKVQGLWAVWNP 293 L + + + Q LW ++ P Sbjct: 248 NLVEQVTMELSNSGQILW-LFRP 269 >gi|269962123|ref|ZP_06176477.1| Protease IV [Vibrio harveyi 1DA3] gi|269833207|gb|EEZ87312.1| Protease IV [Vibrio harveyi 1DA3] Length = 616 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 13/266 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 ++ + +A + G I D Q+ + + + DD A+++ + SPGGS Sbjct: 318 PNLAPSENDIAVVVASGTIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSPGGS 377 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 378 AFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVI 437 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +KLG+S V +SP + + ++ A + Q ++ Y F+ LV +R+ Sbjct: 438 TTFEKGFNKLGISTDGVGTSPFSGDG-ITTGLSTGASEAFQLGIEHGYKRFISLVGSNRD 496 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--VDQSIRKIKDWNPPK 256 + D+ ++ GR+WTG +A GL+D +G ++ + L + I +++ P Sbjct: 497 MSLDEVDKVAQGRVWTGQDALSFGLVDQMGDFDDAVKLAAKLAEVENYEIYWVEEPLSPT 556 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQT 282 + + N SL D + ++ Sbjct: 557 EQFIQEFMNQVKVSLGIDATSFLPKS 582 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 101/276 (36%), Gaps = 60/276 (21%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHV-----ARIAIRGQIEDSQ----------------- 51 ++ LV + V YF++ ++ ++ P V + + G I + + Sbjct: 29 LIFLVMIAVFYFAF-TYTGESQPTVDKESALVMNLSGPIVEQRRYVNPMDSVAGSILGNE 87 Query: 52 --------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVIT 101 ++++ I D + L+++L P + I +A+ + K KPV Sbjct: 88 IPKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKALNEFKTSGKPVYA 147 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVK 156 S Y ++ ++ + A GVL + Y K L+KL VS + Sbjct: 148 VGDFYNQS-QYYLASYADKVFLAPDG-----GVLIKGYSSYSMYYKTLLEKLDVSTHVFR 201 Query: 157 SSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP-----------YDK 203 K+ PF +++ A + + + FV V+ +R I + Sbjct: 202 VGTYKSAIEPFIRDDMSDAAKESATRWITQLWSAFVDDVATNRKIDAKVLNPTMDELLAE 261 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + DG A K+GL+D + +++V + Sbjct: 262 MKSV-DGD--LAQLALKMGLVDELATRQDVRKLFAK 294 >gi|253998978|ref|YP_003051041.1| peptidase S49 [Methylovorus sp. SIP3-4] gi|313201082|ref|YP_004039740.1| peptidase s49 [Methylovorus sp. MP688] gi|253985657|gb|ACT50514.1| peptidase S49 [Methylovorus sp. SIP3-4] gi|312440398|gb|ADQ84504.1| peptidase S49 [Methylovorus sp. MP688] Length = 316 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 10/244 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 VL K T + L+ + + S NS H A I I G I + ++I +E Sbjct: 35 VLFKSLTFIYLFMLLFYALDWVGGDSSA--NSDHTAIIDIYGVIGSDDQVSADDVIGSLE 92 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLIS 115 + +I+ ++SPGGS I I + + PV V ++ AS GY I+ Sbjct: 93 SAYENKHTKGIILRINSPGGSPVQAGIINDEIHRQRKLHPNIPVYAVVEDICASGGYYIA 152 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DK+GV + + + KA PFS VNPK Sbjct: 153 VAADKIFVDKASIVGSIGVLMDGFGFTGIMDKVGVERRLLTAGENKAILDPFSPVNPKHK 212 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + Q +++ + F+ +V E R +T G W+G + ++GL D G + V + Sbjct: 213 EYAQSMLNQIHQQFIAVVREGRGKRLKETDDTFSGLFWSGETSVQMGLADGFGSSDYVAR 272 Query: 236 SLYA 239 + Sbjct: 273 EIIK 276 >gi|37679336|ref|NP_933945.1| protease IV [Vibrio vulnificus YJ016] gi|37198079|dbj|BAC93916.1| protease IV [Vibrio vulnificus YJ016] Length = 626 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 133/270 (49%), Gaps = 18/270 (6%) Query: 21 TVVYFSWSSHVEDN----SPHVARIAIRGQIEDSQE---------LIERIERISRDDSAT 67 + Y+ + + + DN + +A + G I D Q+ + + + DD Sbjct: 316 AISYYDYRATMRDNFDANADDIAIVVASGTIMDGQQPRGTVGGDTVAGLLRQARNDDKVK 375 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I +Q +K+ KP++ + +AAS GY IS +++ I+A T Sbjct: 376 AVVLRVDSPGGSAFASEVIRNEVQALKDAGKPIVVSMSSLAASGGYWISMSADKIIAQPT 435 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + +KLG+ V +SP E + ++ A Q Q ++ Y Sbjct: 436 TLTGSIGIFSVITTFEKGFNKLGIYTDGVGTSPFSGEG-ISTGLSKGASQAFQMGIEHGY 494 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ LV ++R++ D ++ GR+WTG +A + GL+D +G ++ + ++ Sbjct: 495 QRFISLVGDNRDLSLDAVDKVAQGRVWTGYDALQHGLVDQIGDFDDAVAEAAKMAQLENY 554 Query: 247 RKI---KDWNPPKNYWFCDLKNLSISSLLE 273 + +P + + +K + IS ++ Sbjct: 555 NLYWVEEPLSPTEQFIQEFMKQVKISMGVD 584 Score = 90.6 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 108/297 (36%), Gaps = 52/297 (17%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYF-SWSSHVEDNSPHVARIAIRGQIEDSQ---------- 51 FV + +LS+ + VYF + + P + + G I + Sbjct: 31 FVRLALTNLIFLLSVALVYFVYFYGHDTQPQVEQPSALVLNLSGPIVEQSLYINPMDSFT 90 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ I D+ T L++SL P + I +A+ + K Sbjct: 91 SSLFGEEIPKENVLFDVVDTIRYAKDDEKITGLVLSLRDMPETNLTKLRYIAKALNEFKA 150 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLG 149 KP+ S Y ++ ++ I A GV+ + Y K L+KL Sbjct: 151 SGKPIYAIGAFYNQS-QYYLASYADKIYLAPDG-----GVMLKGYSAFNLYYKTLLEKLD 204 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--- 204 V+ + K+ PF +++P A + + + FV V+ +RNI Sbjct: 205 VTTHVFRVGTYKSAIEPFVRDDMSPAAKESATRWLTQLWGAFVDDVANNRNIDPKTLNPS 264 Query: 205 --LVLSDGRIWTGAEA---KKVGLIDVVGGQEEVWQSL---YALGVDQSIRKIKDWN 253 LS + G A K+GL+D + ++++ L + D S + I ++ Sbjct: 265 MEEFLSQLKSVNGDLAALSIKLGLVDELATRQQLRAQLAEKFGASGDDSYKAISYYD 321 >gi|313886500|ref|ZP_07820216.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica PR426713P-I] gi|312924046|gb|EFR34839.1| signal peptide peptidase SppA, 67K type [Porphyromonas asaccharolytica PR426713P-I] Length = 594 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 14/240 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERIS 61 L V+L+ VY + S +V + G+I S L +RI + Sbjct: 289 LHFVSLSDVYATRGS-ARKGGANVGVLFAEGEINVEVADSPFNTKKVVSDRLADRILEMG 347 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DD AL+V ++SPGGS+Y E ++ A+ K KPV+ + + AAS GY +S ++ I Sbjct: 348 EDDDYDALVVRVNSPGGSSYISEQLWYAVHKASENKPVVISMGDYAASGGYYMSSGASYI 407 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A +++ GSIG+ P +K+GV VK++ + + + Q Sbjct: 408 FAEPSTITGSIGIFGVVPNATKLANKIGVHQDVVKTAQHADLGALDRPWTEEERALFQQY 467 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V+ Y F++ VSE RN+ + ++ GR+WTGA+A ++GL+D +GG ++ + Sbjct: 468 VNRGYALFLKRVSEGRNMTTAQVDSIAQGRVWTGAQALELGLVDELGGLQDAIAYAASQA 527 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++E I+ DD + ++++ PG + EA+ A++ K I + + GY Sbjct: 89 VLEAIDEAKNDDRIKGIYLNVTDPGCGYASAEALRGALEDFKEDGKFIVSYSDFYSLKGY 148 Query: 113 LISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 ++ ++ + + GSI G+ + K LDK+GV + K K+ P+ Sbjct: 149 YLASVADQLYVNKE---GSIAFDGLAGGAVFFKDLLDKIGVEMMVFKVGTFKSAVEPYIL 205 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLID 225 + ++ + + + + V SRN+ + L+D + T GLID Sbjct: 206 NSMSEANRTQITSYLGDIWGRILSEVGASRNLDSVRLQSLADSMQSVQTTDSYLANGLID 265 Query: 226 VVGGQEEVWQSLYAL 240 Q++ ++L +L Sbjct: 266 GALYQDQALEALCSL 280 >gi|308187053|ref|YP_003931184.1| protease IV [Pantoea vagans C9-1] gi|308057563|gb|ADO09735.1| protease IV [Pantoea vagans C9-1] Length = 620 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 12/271 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATAL 69 ++++ +S ++A + G I D +E +I D A+ Sbjct: 311 SVSIYDYSVKPASSQQDGNIAVVMASGAIMDGEETPGNVGGDTTAAQIRDARLDPKIKAI 370 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++SPGGS A EAI + + KP++ + MAAS GY IS ++ IVA ++L Sbjct: 371 ILRVNSPGGSVTASEAIREELAAAQAAGKPIVVSMGGMAASGGYWISTPASYIVANPSTL 430 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ ++ LD +GV V +SP+ S + + Q+M +++ Y Sbjct: 431 TGSIGIFGVINTLENSLDSIGVHTDGVATSPLADI-STTKALPAEVQQLMHLTIENGYRN 489 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIR 247 FV LV++SR+ ++ ++ G +WTG++AK GL+D +G ++ + L V + + Sbjct: 490 FVGLVAKSRHKTPEQIDAIAQGHVWTGSDAKANGLVDALGDFDDAVKKAGELAKVSKPML 549 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 P N S+ ++L DT+ Sbjct: 550 SWYQDEPTFLDMVLGQMNASVQAVLPDTLKA 580 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 80/200 (40%), Gaps = 13/200 (6%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D + +++ L GG + + + +A+++ ++ KP+ + + + Sbjct: 100 DVVDAIRQAKGDSNIKGMVLDLREFAGGDQPSLQYVGKALREFRDSGKPIYA-LGDSYSQ 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ + I + V G Y K L+KL V+ + K+ PF Sbjct: 159 AQYYLASYATKIYLSPQGTVDLHGFATNGLYYKTLLEKLKVTSHVFRVGTYKSAVEPFLR 218 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A V + ++ V+ +R + ++ + I T A Sbjct: 219 DDMSPAARDADSRWVGQLWQNYLNTVAANRQLTPEQLFPGAAAIIAGLNAVKGDTAQYAL 278 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 L+D +G + Q L Sbjct: 279 DNKLVDALGSRAAADQELVK 298 >gi|238786163|ref|ZP_04630115.1| Protease 4 [Yersinia bercovieri ATCC 43970] gi|238712932|gb|EEQ04992.1| Protease 4 [Yersinia bercovieri ATCC 43970] Length = 281 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 17/248 (6%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L +I + D A+I+ ++SPGGS A E I + ++ KP++ + MA Sbjct: 11 GGDALAAQIRQARLDPKIKAVILRVNSPGGSVSASELIRSELSALRAANKPLVVSMGGMA 70 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS +N IVA+ ++L GSIG+ + L+ +GV V +SP+ S Sbjct: 71 ASGGYWISTPANYIVASPSTLTGSIGIFGVINTFQNSLESIGVHTDGVATSPLADI-SIT 129 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P+ QMMQ +++ Y F+ LV+ SR+ ++ ++ G +W G +AK GL+D + Sbjct: 130 KNLPPEFSQMMQINIENGYKTFIDLVATSRHKTVEQVDQIAQGHVWIGFDAKSNGLVDQL 189 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQ 285 G ++ + + L K+K W + WF D +LS I + ++ M T +Q Sbjct: 190 GDFDDAVKKVAELA------KLKTW---QLNWFIDEPSLSDLIFGQMSASVQAMLPTAIQ 240 Query: 286 GLWAVWNP 293 W P Sbjct: 241 A----WLP 244 >gi|85714139|ref|ZP_01045128.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A] gi|85699265|gb|EAQ37133.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A] Length = 327 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 89/306 (29%), Positives = 160/306 (52%), Gaps = 15/306 (4%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 + ++ + +++ V Y + + + R++I G I Q+ +E +ER+ Sbjct: 19 KLTFWRVASALIVIGAVIAVGAYATPWGGKLTGASAIQRVSINGLIRSDQKRVEALERLG 78 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + SA A+IV ++SPGG+ E ++ A+ ++K +KP++ V + AS GY+ + AS+ I Sbjct: 79 K-SSAPAVIVHINSPGGTTAGSEELYDALTRLKAKKPMVVVVEGLGASGGYIAALASDHI 137 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA +T+LVGSIGVLFQYP L +GV ++++KSSP+KA P+ + +P+A + + Sbjct: 138 VAQQTALVGSIGVLFQYPNFTELLKTVGVQMEAMKSSPLKAAPNGYEPTSPEARAAIDAL 197 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V S+ WF LV + R + + ++DGR++TG +A + LID +G ++ L A Sbjct: 198 VKDSFDWFRGLVRDRRGMDDAQLEKVADGRVFTGRQAVNLKLIDQLGDEKVAIAWLVAEK 257 Query: 242 VDQSIRKIKDWNPPKNYW------------FCDLKNLSISSLLEDT--IPLMKQTKVQGL 287 ++D+ + F L SI+ +E T + + + G+ Sbjct: 258 KVAPDLPVRDFKLSPRFTDLTFLRTAASVAFDALGLNSIARQVEQTGFVGAADRLGLNGM 317 Query: 288 WAVWNP 293 A+W P Sbjct: 318 LALWQP 323 >gi|254362448|ref|ZP_04978557.1| S49 family peptidase IV [Mannheimia haemolytica PHL213] gi|261494115|ref|ZP_05990618.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496044|ref|ZP_05992454.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094037|gb|EDN74953.1| S49 family peptidase IV [Mannheimia haemolytica PHL213] gi|261308294|gb|EEY09587.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310281|gb|EEY11481.1| S49 family peptidase IV [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 618 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 17/272 (6%) Query: 31 VEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAY 81 E N+P +A + + G I S+ L++ +++ D + LI+ ++SPGGSA Sbjct: 317 AEVNAPKIAVVNVEGAIAGGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAV 376 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + ++ + KPV+ + MAAS GY I+ S+ I+A+ +L GSIG+ Sbjct: 377 ASELIRQEVEAFQQAGKPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVT 436 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LGVS + +S + A+ + + + +++Q +++ Y F+ LVS R +P Sbjct: 437 FEKTAKNLGVSEDGIATSAL-AQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMP 495 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYW 259 + ++ G++W G +A K GL+D +G + +L L + W Sbjct: 496 KEVVDKVAQGQVWLGTDALKHGLVDELGNFNVAYNALSELINQKREAENQPKVEQFGLQW 555 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 F + + +L D + ++Q A W Sbjct: 556 FAEQDDSLFGTLARDF-----KAQLQFSVANW 582 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 15/163 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEA------IFRAIQKVKNR-KPVITEVH 104 ++++ I D T L++ L I I K KPVI Sbjct: 92 DVVQAISHAKNDPKITGLVLDL-----QKLQSADFSSLDFIGNEINNFKQSGKPVIAVGE 146 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + + Y ++ ++ I + V G+ + Y K LDK+ + K+ Sbjct: 147 DYSQK-QYYLASFADEIYLNKVGAVDLKGLNYSNTYFKTLLDKIEAEPHIFRVGTYKSAV 205 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 PF +++ +A Q + ++ ++ V ++++RNI Sbjct: 206 EPFMRDDMSEEAKQNARGWLNGTWQQTVATLAQNRNIEPQALD 248 >gi|229528985|ref|ZP_04418375.1| protease IV [Vibrio cholerae 12129(1)] gi|229332759|gb|EEN98245.1| protease IV [Vibrio cholerae 12129(1)] Length = 616 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 14/267 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D + + D + A+++ + SPGGSA+A E I Sbjct: 327 IAIVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + L+ Sbjct: 387 EIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGLNN 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ V ++P + + + A +Q ++ Y F+ LV+E R + L Sbjct: 447 LGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVDEL 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPKNYWFCDLKN 265 + GR+WT +A+ +GL+D +G ++ L +++ P + DL Sbjct: 506 AQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEPLTPAQQFLQDLLG 565 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 SL D L+ + +Q L W Sbjct: 566 QVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYHLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|312795521|ref|YP_004028443.1| Signal peptide peptidase sppA [Burkholderia rhizoxinica HKI 454] gi|312167296|emb|CBW74299.1| Signal peptide peptidase sppA (EC 3.4.21.-) [Burkholderia rhizoxinica HKI 454] Length = 338 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 10/243 (4%) Query: 7 KIKTRYVMLSL-VTLTVVYFSW-SSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R L++ + LT FS H A +++ G+I +Q + ++ Sbjct: 54 RIFFRGAFLAVWIALTWSVFSLLGERSVSAGRHTALVSLNGEIAANSNASAQNIDAALQN 113 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISC 116 D + +I+ ++SPGGS I I++++++ KP+ V ++ AS GY ++ Sbjct: 114 AFDDSNTAGVILRINSPGGSPVQAGIINTEIRRLRDKYPSKPLYVVVEDICASGGYYVAA 173 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGV V +DKLG+ + S K PFS + K Q Sbjct: 174 AADKIYVDKASIVGSIGVRMDGFGVTGLMDKLGIERRMHTSGENKGFYDPFSPESDKMKQ 233 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F+ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 234 HAQHMLDDIHAQFIAAVRQGRGKRLKETPDMFSGLFWTGDKSVELGLADGFGSTDYVARE 293 Query: 237 LYA 239 + Sbjct: 294 VIK 296 >gi|218708935|ref|YP_002416556.1| protease IV [Vibrio splendidus LGP32] gi|218321954|emb|CAV17952.1| Protease IV (Endopeptidase IV) [Vibrio splendidus LGP32] Length = 616 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 16/265 (6%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I G I D + + DD A+++ + SPGGSA+A E I Sbjct: 327 VAVIVASGAIMDGKQPRGTVGGDTTAALLRQARNDDKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS ++ I+A T+L GSIG+ + L+ Sbjct: 387 EIEAIKQAGKPVVVSMSSLAASGGYWISMGADKILAQPTTLTGSIGIFSVITTFEKGLND 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV V +SP + ++ A Q +++ Y F+ LV E+R + D + Sbjct: 447 IGVYTDGVGTSPFSGLG-ITTGLSEGAKDAFQMGIENGYRRFISLVGENRGMEVDAVDKI 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY-----WFCD 262 + GR+WTG +A + GL+D +G ++ + +L ++ P F + Sbjct: 506 AQGRVWTGQDAIEKGLVDEIGDFDDAITAAASLAELETYNIYWVEEPLSATELFIQEFMN 565 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGL 287 +SI ++ IP Q Q L Sbjct: 566 QVQMSIGLDIQSMIPSSLQPVTQQL 590 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 101/285 (35%), Gaps = 61/285 (21%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ------ 51 FV + + +LS+ + VYF H + P V + + G I + Sbjct: 21 FVRLALVNLFFLLSIAIIYFVYF----HSDTTQPTVPQESALVLNLSGPIVEQSRYINPM 76 Query: 52 -------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 +++E I DD T ++++L P + I +A+ Sbjct: 77 DSVTGSLLGKDLPKENVLFDIVETIRYAKDDDKVTGIVLALKELPETNLTKLRYIAKALN 136 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-----VKPFL 145 + K KP+ S Y ++ + + + GVL + K L Sbjct: 137 EFKATGKPIYAVGDFYNQS-QYYLASYATKVFLSPDG-----GVLLKGYSAYSLFYKTLL 190 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 +KL V+ + K+ PF +++ A + + + +V VS +R I Sbjct: 191 EKLDVNTHVFRVGTYKSAIEPFIRDDMSDAAKESASRWLGQLWGAYVDDVSNNRQIDAKT 250 Query: 203 ---------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 K L DG I A+K+GL+D + +++V L Sbjct: 251 LNPSMDSFLKDLESVDGDI--AKLAEKLGLVDELATRQQVRLELA 293 >gi|145634892|ref|ZP_01790599.1| protease IV [Haemophilus influenzae PittAA] gi|145267758|gb|EDK07755.1| protease IV [Haemophilus influenzae PittAA] Length = 615 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV+ V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVNADGVSTTELAKT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 114/295 (38%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLTGDGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLTALFGKGSDGKANLIE 303 >gi|218961332|ref|YP_001741107.1| putative Acid phosphatase [Candidatus Cloacamonas acidaminovorans] gi|167729989|emb|CAO80901.1| putative Acid phosphatase [Candidatus Cloacamonas acidaminovorans] Length = 819 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 13/242 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGG 78 + + VA I G I + ++ I + +D +I+ + S GG Sbjct: 523 AWAKPKENLVAVIYASGNIVSGKGTPGQKIAQETSVDLIRKARKDKQYKGIILRVDSGGG 582 Query: 79 SAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 SA A + I R ++ K +KP++ + AAS GY ISC ++ I+A ++L GSIGV+ Sbjct: 583 SAQASDIILRELELAKTENKKPIVVSMGGTAASGGYYISCNADKIIAEPSTLTGSIGVVG 642 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 K+ V+ +VK S + QM+ +++ Y FV V Sbjct: 643 LMFNGTDMFQKIKVNWDTVKKGEHADMVSINRPWTEEEKQMVIRNIENCYDDFVMKVDAG 702 Query: 197 R-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R N+ ++ + GR+WTG +A+K+GL+D +GG E+ +S+ L + + D Sbjct: 703 RPNMTLEQVKQYAQGRVWTGEQAQKIGLVDELGGLEKAKESMSELIGKKGKLTLVDATTK 762 Query: 256 KN 257 K Sbjct: 763 KE 764 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 90/212 (42%), Gaps = 12/212 (5%) Query: 37 HVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + +I I + S + +I+ I++ D +++ S S E + A K+ Sbjct: 297 KIGKIKIYDTGDKSIESIIDNIKQAKDDLEIEGILLKNPSFSTSLALQEELVDAFNDFKS 356 Query: 96 RKPVITEVHEMAASAGYLISCA-SNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVS 151 + ++ + GY+ + + ++ I GS+ G+ PY+K L LG+ Sbjct: 357 SGKKVCFYYDNIGNGGYIFASSIADKIYLNP---TGSVDLRGLSISSPYLKNMLASLGIE 413 Query: 152 IKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY--DKTLVL 207 + + +S K + FSE + P + + ++ S Y ++ + R ++ Sbjct: 414 VLNFRSHEYKDAGNMFSEERMTPAEREAYESLLQSLYDQILQRMETGRGDRLVASADEII 473 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++G + +A + GL+D + ++++ + L Sbjct: 474 NEGPYFIANDALEKGLVDALIYEDQLNKQLKK 505 >gi|229524006|ref|ZP_04413411.1| protease IV [Vibrio cholerae bv. albensis VL426] gi|229337587|gb|EEO02604.1| protease IV [Vibrio cholerae bv. albensis VL426] Length = 616 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 14/267 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D + + D + A+++ + SPGGSA+A E I Sbjct: 327 IAIVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + L+ Sbjct: 387 EIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGLNN 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ V ++P + + + A +Q ++ Y F+ LV+E R + L Sbjct: 447 LGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVDEL 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPKNYWFCDLKN 265 + GR+WT +A+ +GL+D +G ++ L +++ P + DL Sbjct: 506 AQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEPLTPAQQFLQDLLG 565 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 SL D L+ + +Q L W Sbjct: 566 QVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQWKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|316931462|ref|YP_004106444.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris DX-1] gi|315599176|gb|ADU41711.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris DX-1] Length = 326 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 151/275 (54%), Gaps = 15/275 (5%) Query: 33 DNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + +ARI I G I + + +E ++R+ + S A+IV ++SPGG+ E + A+ + Sbjct: 49 TTTGSIARIKIEGLIRSNNDRVEALDRLGK-SSYAAVIVHINSPGGTTAGSEELHDALVR 107 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 +K +KP++ V +AAS GY+ + AS I+A +TSLVGSIGVLFQYP + L +GV + Sbjct: 108 LKAKKPMVVVVEGLAASGGYIAALASEHIIAQQTSLVGSIGVLFQYPNLSELLKTVGVKV 167 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + VKSSP+KA P+ F +P+A ++ +V SY WF +V +SR + D+ V++DGR+ Sbjct: 168 EEVKSSPLKAAPNGFEPTSPEARAAIESLVRDSYAWFRGMVQQSRKMTDDQLNVVADGRV 227 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN------- 265 +TG +A + LID +G ++ L +S ++D+ + Sbjct: 228 FTGRQAVGLKLIDQLGDEKTAIAWLETAKNVKSGLPVRDYKLAPQFGDLTFLRAAASIAF 287 Query: 266 --LSISSLLED-----TIPLMKQTKVQGLWAVWNP 293 +S++ + +++ + G+ A+W P Sbjct: 288 DAAGLSAVARRVEQTGAMQSVERLGLDGMLALWAP 322 >gi|237640201|ref|YP_002891056.1| peptidase S49 family protein [Escherichia coli] gi|237809921|ref|YP_002894360.1| peptidase S49 family protein [Escherichia coli] gi|237810110|ref|YP_002894549.1| peptidase S49 family protein [Salmonella enterica] gi|229561420|gb|ACQ77623.1| peptidase S49 family protein [Escherichia coli] gi|229561594|gb|ACQ77796.1| peptidase S49 family protein [Salmonella enterica] gi|229561776|gb|ACQ77977.1| peptidase S49 family protein [Escherichia coli] gi|332144543|dbj|BAK19763.1| peptidase S49 family protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 302 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L ++ ++ + + +PH A I IRG+I D+ LI Sbjct: 17 MLRVLRASGFVLLMIGFIILASNPGGMPWQSAKAGAPHTAYINIRGEIAAGTLADADHLI 76 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ + K V + ++ AS G Sbjct: 77 PSIQAAFDNPNSQAIVLRINSPGGSPVQAGRIYDEVKAQRALHPEKKVYAIIDDIGASGG 136 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A SLVGSIGV+ +DKLG+ +++ S KA PFS + Sbjct: 137 YYIASAADEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLT 196 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + V+ ++ F+ V R + G +W G +AK +GLID +G Sbjct: 197 SDMKKFWEGVLSKTHQQFIERVKAGRGDRLKDDPEVFSGLLWNGEQAKDIGLIDGLGSLN 256 Query: 232 EVWQSL 237 V + + Sbjct: 257 SVARDV 262 >gi|260913982|ref|ZP_05920456.1| signal peptide peptidase SppA [Pasteurella dagmatis ATCC 43325] gi|260632069|gb|EEX50246.1| signal peptide peptidase SppA [Pasteurella dagmatis ATCC 43325] Length = 626 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 12/232 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQE---------LIERIERISRDD 64 L +V + + H +A + + G I D + + + + D+ Sbjct: 305 LKMVEFDRYLADLPDRMTSSDKHKIAVVNVEGAIIDGESFEDDVGGDTIARLLRQAKDDE 364 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVA 123 S A+++ ++SPGGSA+A E I + + + K KPVI + MAAS GY IS ++ IVA Sbjct: 365 SVKAVVLRVNSPGGSAFASEIIRQEVTHLQKAGKPVIVSMGGMAASGGYWISSTADYIVA 424 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + ++ GSIG+ P + + K GVS V +SP+ +E S FS ++ + + Q ++ Sbjct: 425 DKNTITGSIGIFAVLPSFEKTIKKAGVSADGVSTSPL-SELSLFSPLSNELNDVFQLEIE 483 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Y F+ LV+E R + ++ G+IW G EA K L+D +G ++ Sbjct: 484 HGYDKFISLVAEGRALDKADVEKVAQGKIWLGQEALKHNLVDQIGTFDDAVD 535 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 17/232 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAAS 109 +++ I +D+ L+ L+ GG A E I RAI +++KPVI Sbjct: 97 DVVYAITNAEKDERIKGLVFDLNFFEGGDLPALEYIGRAISDFKRSKKPVIVFADNYNQK 156 Query: 110 AGYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 YL++ ++ I V SI G+ Q Y K L+ L V+ + K+ P Sbjct: 157 -QYLLASYADQIYLNPVGKV-SILGMKQQNLYFKSMLNMLDVTTNVFRVGTYKSAVEPLL 214 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-----RIWTGAEA--- 218 +++ A + M+ ++ + +V +V+++R I L + R+ G + Sbjct: 215 RDDMSEAAKEDMKSWLNQMWTNYVSIVADNRQIEPRAVLPDAKTYVEELRVLKGDSSAYT 274 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 K+ GLI + V L + + ++K + + DL + SS Sbjct: 275 KQRGLITEFADRLTVEDKLIEIFGQTELGELKMVE--FDRYLADLPDRMTSS 324 >gi|218458242|ref|ZP_03498333.1| signal peptide peptidase SppA, 36K type [Rhizobium etli Kim 5] Length = 269 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 107/252 (42%), Positives = 172/252 (68%), Gaps = 3/252 (1%) Query: 11 RYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D A Sbjct: 1 RIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQVKA 60 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+++ A + I+A ++S+ Sbjct: 61 AVISISSPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMVATAGDTIIAGDSSI 120 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+W Sbjct: 121 TGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNW 180 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV LV++ R +P ++ L L+DG I+TG +A + LID +GG+ E+ L + GVD + Sbjct: 181 FVDLVADRRKLPREEALKLADGTIFTGRQALQAKLIDTIGGEPEIRAYLKSRGVDADL-P 239 Query: 249 IKDWNPPKNYWF 260 + DW+ N F Sbjct: 240 MVDWDKKSNTPF 251 >gi|296491980|ref|YP_003662447.1| peptidase S49 SppA [Xenorhabdus nematophila ATCC 19061] gi|289176867|emb|CBJ93038.1| Peptidase S49, SppA [Xenorhabdus nematophila ATCC 19061] Length = 325 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 12/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS----HVEDNSPHVARIAIRGQIE-----DSQELI 54 +L+ ++ +L +V ++ + + +PH A I IRG+I D+ LI Sbjct: 40 MLRVLRASGFVLLMVGFIILASNPGGMPWQSAKAAAPHTAYINIRGEIAAGTLADADHLI 99 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 I+ + ++ A+++ ++SPGGS I+ ++ + K V + ++ AS G Sbjct: 100 PSIQAAFDNPNSQAVVLRINSPGGSPVQAGRIYEEVKAQRALHPEKKVYAIIDDIGASGG 159 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ +++ I A SLVGSIGV+ +DKLG+ +++ S KA PFS + Sbjct: 160 YYIASSADEIYADRASLVGSIGVISSGFGFTGLMDKLGIERRAITSGEHKALLDPFSPLT 219 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + V+ ++ F+ V R + G +W G +AK++GLID +GG Sbjct: 220 ADMKTFWEGVLSKTHQQFIERVKAGRGERLKDDQKVFSGLLWNGEQAKEIGLIDGLGGLN 279 Query: 232 EVWQSL 237 V + + Sbjct: 280 SVARDV 285 >gi|327484530|gb|AEA78937.1| Protease IV [Vibrio cholerae LMA3894-4] Length = 616 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 14/267 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + G I D + + D + A+++ + SPGGSA+A E I Sbjct: 327 IAIVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + L+ Sbjct: 387 EIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFEKGLNN 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ V ++P + + + A +Q ++ Y F+ LV+E R + L Sbjct: 447 LGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLTLKAVDEL 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPKNYWFCDLKN 265 + GR+WT +A+ +GL+D +G ++ L +++ P + DL Sbjct: 506 AQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEEPLTPAQQFLQDLLG 565 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 SL D L+ + +Q L W Sbjct: 566 QVRVSLGLDVSTLLPK-SLQPLAVEWQ 591 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPMDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEEFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|205374508|ref|ZP_03227304.1| signal peptide peptidase [Bacillus coahuilensis m4-4] Length = 336 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 25/282 (8%) Query: 32 EDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPG 77 S +A + + G I+D+ ++ ++++E I D + +++ ++SPG Sbjct: 56 GSASKRIAVLEVNGVIQDTGDVASFFESPTYNHRQFMDQLEVIKEDKTIQGVVLRVNSPG 115 Query: 78 GSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I + + ++K PV + +AAS GY IS ++ I A +L GS+GV+ Sbjct: 116 GGTAESAQIHQKLVELKEEAEIPVYVSMGSIAASGGYYISAPADKIFAMGETLTGSLGVI 175 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q ++ GV + ++KS P K SP EV + ++Q ++D+SY FV +++ Sbjct: 176 MQSLNYSGLAEEYGVEMVTIKSGPYKDILSPTREVTEEERNILQSMIDNSYEAFVDVIAT 235 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R++ + ++DGRI+ G +AK+ LID G E+ L AL D + + + Sbjct: 236 GRDMSEAEVKRIADGRIYDGYQAKENNLIDEFGYYEDA---LEALKKDHDLNGAQVFEYS 292 Query: 256 KNYWFCDLKNLSISSLLED------TIPLMKQTKVQGLWAVW 291 F L + S S+ + + ++ L ++ Sbjct: 293 TGMGFESLFSYSAQSVFGKDMESRMLMDFLSKSSGPRLMYLY 334 >gi|33152022|ref|NP_873375.1| protease IV, signal peptide peptidase [Haemophilus ducreyi 35000HP] gi|33148244|gb|AAP95764.1| protease IV, signal peptide peptidase [Haemophilus ducreyi 35000HP] Length = 618 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 21/268 (7%) Query: 37 HVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +A I + G+I S+ + E + + D++ +I+ ++SPGGS A E I Sbjct: 323 KIAVINVEGEIISGKSKERSAGSETISELLRQAREDNNVDGVILRVNSPGGSVVASEIIL 382 Query: 88 RAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + +Q ++ KPV+T + +AAS GY IS S+ I+A+ ++ GSIG+ + Sbjct: 383 QELQSIQQAGKPVVTSMGGLAASGGYWISATSDKIIASPNTITGSIGIFGLAMTFEKTAK 442 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 LG+S V +SP+ S ++ + +++Q +++ Y F+ LVS RN+ + Sbjct: 443 HLGISEDGVATSPLAKTSS-LQHLSNEHAELIQINIENGYDAFLDLVSRGRNMSKAEVDK 501 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY---WFCDL 263 ++ G++W+G +A K GL+D +G + L L + RK K N K++ WF + Sbjct: 502 VAQGQVWSGEDALKHGLVDQLGDFHTAYDVLTDLINQK--RKAKGENEIKHFTAQWFIES 559 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVW 291 SSLL++ K + AVW Sbjct: 560 DKGLFSSLLKNI-----GFKAKSTLAVW 582 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 111/275 (40%), Gaps = 47/275 (17%) Query: 8 IKTRYVMLSLVTLTVVYF----SWSSHVEDNSPHVA-RIAIRGQIED------------- 49 I +++ L + F S ++ ++ + VA R+ + G + D Sbjct: 20 INLFFILFLLTGFASIAFLVNGSDTNKSKEPNEKVALRLNLSGYLTDNHDDFAHRLIQSE 79 Query: 50 ----------SQELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-K 97 + +++ I + ++D + T +++ LS GS ++ I ++ K K Sbjct: 80 LTNDESLKASTFDVVRAIGKAAKDPNITGIVLDLSKFEGSDHSSLSFIGSELKAFKTSGK 139 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKS 154 PVI + S Y ++ ++ I + GSI G+ F Y K LDK+ Sbjct: 140 PVIAIGENYSQS-QYYLASFADKIYLNKA---GSINLQGLNFSSLYFKALLDKIDAVPHI 195 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + K+ PF ++++ +A Q Q +++S +H F ++E+R I D+ L I Sbjct: 196 FRVGTYKSAVEPFLRNDMSDEAKQNAQTLLNSIWHQFRTDIAENRMIAVDQVLPEPKSLI 255 Query: 213 W--------TGAEAKKVGLIDVVGGQEEVWQSLYA 239 A L+ +G + E+ Q+L Sbjct: 256 EKYKAVNANDAQYALNQKLVTDIGSKAEIEQALIE 290 >gi|41410286|ref|NP_963122.1| hypothetical protein MAP4188 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399120|gb|AAS06738.1| SppA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 595 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 17/259 (6%) Query: 36 PHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSPGGS 79 P VA I + G + D S + + + DD+ +A+++ ++SPGGS Sbjct: 302 PTVAVINVDGTLVDGRGGPHFLPFGAATVGSDTIAPALREAAADDAVSAIVLRVNSPGGS 361 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E ++R +++ + R KPV+ + +AAS GY +S A++ IVA ++ GSIGV+ Sbjct: 362 VTASETLWREVKRARERGKPVVASMGAVAASGGYYVSVAADAIVANPATITGSIGVITGK 421 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ L +LGV +V+++ S + P+ + D Y FV V+E RN Sbjct: 422 LVIRDLLGRLGVGSDTVRTNANADAWSIDAPFTPEQRAHREAEADLVYTDFVSRVAEGRN 481 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + D ++ GR+WTGA+A + GL+D +GG + L ++ P Sbjct: 482 LTTDAVERVARGRVWTGADAHERGLVDELGGFRIAVRRAKILAGLDEDADVRIVTYPSGS 541 Query: 259 WFCDLKNLSISSLLEDTIP 277 L+ + S ++P Sbjct: 542 LLDVLRPRASSQPAAVSLP 560 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 12/248 (4%) Query: 48 EDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 ++ ++ I R + D LI + SP + A + + AI KP + Sbjct: 66 ASLRDTVDAIHRAAEDPRVAGLIARVQLAPSP---SAAVQELREAIVAFTAAKPSLAWAE 122 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + Y ++ A I VG IG +++ LDK G+ + V K+ Sbjct: 123 TYPGTLSYYLASAFGEIWMQPGGSVGLIGFASNATFLRDALDKAGIEAQFVARGEYKSAV 182 Query: 165 SPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + F+E + + ++DS + V+ESR + D L+D +A G Sbjct: 183 NRFTEHGFTEAHREAVTRMLDSVQEQVWQAVAESRKLDTDALDALADRAPLLRQDALDSG 242 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 L+D +G +++ + + L Q + D PP+ + + S L +P + Sbjct: 243 LVDRIGFRDQAYDRIAELVGVQDVSP--DTEPPR--LYVSRYAGAARSRLSPPVPSLPGR 298 Query: 283 KVQGLWAV 290 + AV Sbjct: 299 RRPPTVAV 306 >gi|188579483|ref|YP_001922928.1| signal peptide peptidase SppA, 36K type [Methylobacterium populi BJ001] gi|179342981|gb|ACB78393.1| signal peptide peptidase SppA, 36K type [Methylobacterium populi BJ001] Length = 322 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 136/222 (61%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI+I G I S+ + IER+ ++ +++S+SSPGG+ E ++R ++ + Sbjct: 51 TENQIARISIGGFIAGSESTRKLIERVGESNAVKGVVISISSPGGTTTGSEELYRNLRAL 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KP++ V AAS Y+ + A++ IVA ET+LVGSIGVLFQYP V LDK+GV ++ Sbjct: 111 AAKKPIVAFVDGTAASGAYITAIAADHIVARETALVGSIGVLFQYPDVSGLLDKVGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 SVKSSP+KAEPS FS +P+A + +V +Y WF LV+E R + + ++DGR++ Sbjct: 171 SVKSSPLKAEPSGFSPTSPEARAALSSIVLDTYGWFKGLVAERRGMDDSQLSAVADGRVF 230 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 +G ++ + L+D +GG+ + L + +KDW P Sbjct: 231 SGRQSLPLKLVDELGGERQAVAWLEKERKVPANLPVKDWKPK 272 >gi|290475449|ref|YP_003468337.1| protease IV, a signal peptide peptidase [Xenorhabdus bovienii SS-2004] gi|289174770|emb|CBJ81571.1| protease IV, a signal peptide peptidase [Xenorhabdus bovienii SS-2004] Length = 636 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 30/282 (10%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSA 80 + + ++ ++A I G I D ++ + E++ + + A+++ ++SPGGS Sbjct: 324 NSDQSNSNIAVIIAEGAIMDGRQSEGIAGGDTIAEQLREARLNPNIKAIVLRVNSPGGSI 383 Query: 81 YAGEAIFRAIQKVKN---------------RKPVITEVHEMAASAGYLISCASNIIVAAE 125 A E I + ++ +KP++ + +AAS GY IS +N I+A + Sbjct: 384 SASELIRSELVAIREGTTVKNKEGHTVKENQKPIVVSMGGLAASGGYWISTPANYIIADK 443 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +L GSIGV + L+ LGV+ + + P+ S +NP +MQ ++S Sbjct: 444 NTLTGSIGVFGVLNTYEKGLNYLGVNTDGISTYPLADI-SVTKGINPMFSDVMQLSIESG 502 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 YH F+ LV++SR ++ ++ GR+W+G++AKK GL+D +G ++ L ++ Sbjct: 503 YHKFIELVAQSRQKTQNEIKEIAQGRVWSGSDAKKNGLVDQLGDFDDAVNKAAQLAGIKT 562 Query: 246 IRKIKDWNPPKNYWFCDLK---NLSISSLLEDTIPLMKQTKV 284 + +W P+ + L + S +LL +T+ M + Sbjct: 563 VSL--NWMQPELSFSEKLMLEFSSSAQALLPNTLQSMLPAPI 602 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 13/188 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAASA 110 ++++ I R D T +++ L + G+ + I +AI + K + + + + Sbjct: 99 DIVDSIRRAKHDAKITGMVLKLDNFLGADQPSMQYIGKAINEFKAAGKTVIAISDSYSQP 158 Query: 111 GYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 Y ++ +N + + V S+ G + Y K LD L VS + K+ P + Sbjct: 159 QYYLASYANKVYLSPHGAV-SLHGFSTNHLYYKSLLDSLKVSTHIFRVGTYKSAVEPMTR 217 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT--------LVLSDGRIWTGAEAK 219 ++ +A Q ++ ++ + ++ +R IP + + A Sbjct: 218 DNMSEEARQADSLWLNELWNNYRNTIAVNRKIPAVRVLPEPTQFIEEFRQAGGDSALYAA 277 Query: 220 KVGLIDVV 227 K L+D + Sbjct: 278 KNKLVDEI 285 >gi|332878311|ref|ZP_08446037.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683762|gb|EGJ56633.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 588 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 14/273 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGS 79 V +A I G+I + +I + + +D A+++ ++SPGG Sbjct: 299 GKVSKEKDKIAVIYANGEIMQGEGNQGIVGHETIIAALRKAVKDKEIKAIVLRINSPGGD 358 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E + R I + +K V + AAS GY I+C + I A S+ GSIGV P Sbjct: 359 ALASELMHREIALARKQKKVYVSMGNYAASGGYYIACNAERIFAEAGSITGSIGVFGALP 418 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 GV+ ++V + P + S F + + V+ M + V+ Y F+ V+E R Sbjct: 419 NASVLAKNWGVNAETVSTHPNALQYSYFQKPSEHFVKEMTESVEQIYKVFLSRVAEGRGK 478 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + ++ GR+W+G EA GL+D +G + ++ R + ++ Sbjct: 479 TVAEIDSIAQGRVWSGKEALAKGLVDELGSLNDAIAYAAKENGLENYRVVSY-----PHY 533 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 D+K L + L ++Q + + V+ Sbjct: 534 KMDMKKLLLRYGLRLKNESLQQELGREAYQVYQ 566 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 92/207 (44%), Gaps = 13/207 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPG---GSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ IE D + + S G G A+A + + RA++ K + ++ Sbjct: 83 NSVLQAIEIAKTDPHIKGISLK--SAGNLSGIAFA-QELRRALEDFKASGKFVLAYNDEI 139 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y + ++ + ++ V G+ + + K +K G+ ++ ++ K+ PF Sbjct: 140 SQLDYYLQSVADKVYISQLGNVNLRGLSSEIFFYKDLQEKTGLRMEVIRHGKYKSAVEPF 199 Query: 168 SEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLS---DGRIWTGAEAKKVG 222 E +Q +++++ ++ V +++SRN+ +K ++ DGR T A++ G Sbjct: 200 LENKMSDNNRLQTTELLNAMWNVLVTDIAKSRNLSVEKLNEIATNVDGR--TAELAQQNG 257 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKI 249 LID V ++E + L + I + Sbjct: 258 LIDGVLFRDEFEKILCEKVGKKEIDDV 284 >gi|114047564|ref|YP_738114.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-7] gi|113889006|gb|ABI43057.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-7] Length = 614 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 16/269 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGSQPAGQIGGDSTAELLRKARFDKHIKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASLGIHTDGVSTSEWAG-LSVTRTLSPQIESVIQRHIERGYLDFISLVAKERKMTLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G ++ L R I+ P+ F Sbjct: 503 DRIAQGRVWSGKKALELGLVDELGDIDQAVAKAAKLADLSLFDTRLIEQELTPEQR-FVQ 561 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 S+S+ L + L T ++ + A W Sbjct: 562 QMFASVSAYLPAS--LSHSTLLEQMLAQW 588 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 98/279 (35%), Gaps = 55/279 (19%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 +F+L I ++ + L+T+ S ++ + + G I D ++ ++ IE Sbjct: 24 KFILNLIFFGFLAIILITIG-----SSEDIQVEDNSTLVLNLAGSIVDQKQQVDPIEAAL 78 Query: 62 R-------------------------DDSATALIVSL---SSPGGSAYAGEAIFRAIQKV 93 + D+ + +++ L G S I A+ + Sbjct: 79 KQGNNGSSDGEILLADIIYVIDNATHDNRISTIVLDLAELKRAGISKLQS--IGDALNRF 136 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGV 150 K + + Y ++ ++ I GS+ G+ Y K L+KL + Sbjct: 137 KESGKKVVAIGNYYEQNQYFLASFADTIYLNPQ---GSVSLDGLSMYNQYFKSALEKLKI 193 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---- 204 + K+ P+ +++ A + ++ + + + V+E+R I + Sbjct: 194 KAHIFRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAENRQIDANTLVLDS 253 Query: 205 ------LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L ++G + A A + +D + EE + + Sbjct: 254 ANYLAQLDKAEGD--SAAMAINMKWVDTLATDEEFRKVM 290 >gi|257869238|ref|ZP_05648891.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803402|gb|EEV32224.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 341 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 14/223 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 D++ + R+ + G I D Q +E + D + ++ ++SPG Sbjct: 55 AGDSNNRILRLTLEGTIANTSGGGLFSTEGYDHQLFLEELRAAQEDPTIKGILFEVNSPG 114 Query: 78 GSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I R ++K+K PV + AAS GY +S ++ I A + ++ GSIGV+ Sbjct: 115 GGVYESAEIAREMKKIKEIGIPVYVSMKNTAASGGYYVSAGADKIFATDETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 LDKLG+ + KS +K S + +++Q VD++Y FV +V+E Sbjct: 175 SGLNYSGLLDKLGIEDSTYKSGALKDMGSSTRAATDEDKKVLQTYVDNAYGRFVSIVAEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + ++DGRI+ G +A + GL+D +G E+ + +L A Sbjct: 235 RGMSEEAVRKIADGRIYDGQQAVENGLVDEIGFPEDAFAALEA 277 >gi|251789811|ref|YP_003004532.1| signal peptide peptidase SppA, 67K type [Dickeya zeae Ech1591] gi|247538432|gb|ACT07053.1| signal peptide peptidase SppA, 67K type [Dickeya zeae Ech1591] Length = 616 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 14/277 (5%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 T +Y + ++ +A + G I D E +I D A+I Sbjct: 308 FTSIYDYTPAPPAVSTNEIAVVFASGTIVDGNETPGYVGGDTTAAQIRDARLDPKVKAII 367 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY +S +N+I+A+ ++L Sbjct: 368 LRVNSPGGSVTASELIRSELMAARQAGKPVVVSMGGMAASGGYWVSTPANVIIASPSTLT 427 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + LD +GV V +SP+ S + +A Q+MQ ++ Y F Sbjct: 428 GSIGIFGVVTTFENALDSIGVHTDGVATSPLAD-LSQTKALPSQASQLMQISIERGYQNF 486 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV++SR + ++ G +W G++AK GL+D +G ++ + L + + Sbjct: 487 ISLVAQSRRKTTQEVDAIAQGHVWVGSDAKTNGLVDQLGDFDDAVKKAAELAKLEQYQL- 545 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 W ++ + + S + +P Q + Sbjct: 546 -SWYTEESDLLNAMFT-QVRSAVYAMLPSALQAVIPA 580 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 110/304 (36%), Gaps = 56/304 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F + I +++ ++ VY + + + + + G + D Sbjct: 19 LNFTREFILNLFLICLILVGIGVYSQLKTPQAEPARGALLLDLTGVVVDKPSVNNKLRQF 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 ++++ I + D + T +++ LS G+ + I +A+++ Sbjct: 79 GREFFGVSASRHQENSLFDIVDSIRQAKDDSNITGMVMDLSDFVGADQPSLQYIGKALRE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 ++ KP+ + Y ++ +N I G+I G Y K LDKL Sbjct: 139 FRDAGKPIFAVGDNFNQT-QYYLASFANKIYLTPQ---GNIDLHGFATNNLYYKTLLDKL 194 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 V+ + K+ PF +++P A + + + + ++ V+ +R I + Sbjct: 195 KVTAHIFRVGTYKSAVEPFIRDDMSPDAREADNRWISTLWQHYLDTVAANRQITPQQLFP 254 Query: 207 LS----------DGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSIRK-----IK 250 + DG T A L+D V + V Q+L A G D + I Sbjct: 255 GAEKILANLQTVDGD--TARYALDNKLVDEVASRSMVEQALIKAFGWDAKTKNFNFTSIY 312 Query: 251 DWNP 254 D+ P Sbjct: 313 DYTP 316 >gi|215429565|ref|ZP_03427484.1| protease IV sppA [Mycobacterium tuberculosis EAS054] gi|289752771|ref|ZP_06512149.1| protease IV SppA [Mycobacterium tuberculosis EAS054] gi|289693358|gb|EFD60787.1| protease IV SppA [Mycobacterium tuberculosis EAS054] Length = 622 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 327 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 386 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 387 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 446 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 447 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 506 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 507 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 566 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 567 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 602 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 76 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 132 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 133 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 192 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 193 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 252 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 253 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 304 >gi|282877202|ref|ZP_06286040.1| signal peptide peptidase SppA, 67K type [Prevotella buccalis ATCC 35310] gi|281300694|gb|EFA93025.1| signal peptide peptidase SppA, 67K type [Prevotella buccalis ATCC 35310] Length = 589 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 19/268 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSATALIVS 72 S E VA G I D E+ + +E ++ DD A+++ Sbjct: 292 SVKEETEGKQVAVYYAYGSIVDNPVTGSMFGAEHMIVGSEVCKDLEALAEDDDVKAVVLR 351 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++S GGSAYA E ++ ++++K +KPV+ + +MAAS GY + C +N IVA T+L GSI Sbjct: 352 INSGGGSAYASEQMWNQVEQLKKKKPVVVSMGDMAASGGYYMGCNANWIVAQPTTLTGSI 411 Query: 133 GVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 G+ P + L KLG+ VK++ S +N + + + +D Y F + Sbjct: 412 GIFAMIPDMSQLLTQKLGIKFDEVKTNKNSTFGSSARPLNAEEIGYLARYIDRGYALFRQ 471 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V++ R + ++ ++ G ++ G +A K+ L+D +GG ++ + L Sbjct: 472 RVADGRKLSVNQVEAIAQGHVFVGRDALKIKLVDELGGLDKAVEKAAKLAKLDEF--YTQ 529 Query: 252 WNPPKNYWFCDLKN-LSISSLLEDTIPL 278 P K W L +S + L++ + Sbjct: 530 DYPAKASWMDQLTGAMSGGNYLDEQLRA 557 Score = 95.2 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 106/289 (36%), Gaps = 44/289 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHV----------EDNSPHVARIAIRGQIEDS 50 M+ K + V L + L VV F S V + + + + G + + Sbjct: 1 MKDFFKYVGATVVGLIVFGLIVVIFGTMSIVGLISSAQATQNVSKNSILVLNLSGSLAEQ 60 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGG---SAYAG-EAIF 87 +++ I++ +D + + S G + YA + I Sbjct: 61 GSDNVWGMLTGNELGSAGLDDILSAIKKAKNNDRIKGI--YIES--GIFLANYASRQEIR 116 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+ K I + Y ++ ++ + ++ G+ Q +VK L K Sbjct: 117 NALLDFKKSGKKIIAYGDNYTQGNYYLASVADKVFLNPQGMIDWHGIGAQPMFVKDLLKK 176 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +G+ + VK K+ + +++ + + Q +D + ++ VS+SR I DK Sbjct: 177 VGIQYQVVKVGKYKSATEMYIADKMSDPSREQTQAYIDGIWSDVLKAVSDSRKINVDKLN 236 Query: 206 VLSDGRI-WT-GAEAKKVGLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 +D I ++ + L+D + +V + ++ L D + ++ Sbjct: 237 QYADSLITFSNPKDYVDAKLVDGLLYTNQVKDEVKKMFGLDKDDPVNQV 285 >gi|88798805|ref|ZP_01114388.1| signal peptide peptidase SppA, 36K type [Reinekea sp. MED297] gi|88778568|gb|EAR09760.1| signal peptide peptidase SppA, 36K type [Reinekea sp. MED297] Length = 327 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 15/274 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + KI T + L+ + S + + H A I + G I + ++ + Sbjct: 44 IFFKILTFTYLFVLLGYVMFNTSATQDIGPTGGHTAVIDVSGVIAQGNLAGADSVVASLR 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLIS 115 R A+I+ ++SPGGS I+ I +++ + P+ + + + AS Y I+ Sbjct: 104 RAVEHSDTRAVILRINSPGGSPVQSAYIYNEINRLRQKYEDIPIYSVIVDSGASGAYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A+ I A SLVGSIGV + ++K+G+ + S KA PF EV+P+ Sbjct: 164 SATQEIYANGASLVGSIGVTAAGFGFQDLIEKVGIERRQFTSGEHKAFLDPFMEVDPEEQ 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + V++ + F+R V R L G WTG++A +GL+D + + Sbjct: 224 ALFEAVLNDVHEQFIRDVQAGRGDRLADNDDLFSGLFWTGSQALDLGLVDGL-------K 276 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 S L D K D+ + +NL +S Sbjct: 277 STSELARDIGYPKTVDFTYHPSPLEQFARNLGVS 310 >gi|113970247|ref|YP_734040.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-4] gi|113884931|gb|ABI38983.1| signal peptide peptidase SppA, 67K type [Shewanella sp. MR-4] Length = 614 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 16/269 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGSQPAGQIGGDSTAELLRKARFDKHIKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASLGIHTDGVSTSEWAG-LSVTRTLSPQIESVIQRHIERGYLDFISLVAKERKMTLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G ++ L R I+ P+ F Sbjct: 503 DSIAQGRVWSGKKALELGLVDELGDIDQAVAKAAKLADLSLFDTRLIEQELTPEQR-FVQ 561 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 S+S+ L + L T ++ + A W Sbjct: 562 QMFASVSAYLPAS--LSHSTLLEQMLAQW 588 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 95/276 (34%), Gaps = 49/276 (17%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 +F+L I ++ + L+T+ S ++ + + G I D ++ ++ IE Sbjct: 24 KFILNLIFFGFLAIILITIG-----SSEDIQVEDNSALVLNLAGSIVDQKQQVDPIEAAL 78 Query: 62 R-------------------------DDSATALIVSL---SSPGGSAYAGEAIFRAIQKV 93 + D+ + +++ L G S I A+ + Sbjct: 79 KQGNNGSSDGEILLADIIYVIDNATHDNRISTIVLDLAELKRAGISKLQS--IGDALNRF 136 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K + + Y ++ ++ I V G+ Y K L+KL + Sbjct: 137 KESGKKVVAIGNYYEQNQYFLASFADTIYLNPQGSVALDGLSMYNQYFKSALEKLKIKAH 196 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT------- 204 + K+ P+ +++ A + ++ + + + V+++R I + Sbjct: 197 IFRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAQNRQIDANTLVLDSANY 256 Query: 205 ---LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L ++G + A + +D + EE + + Sbjct: 257 LAQLDKAEGD--SATMAINMKWVDTLATDEEFRKVM 290 >gi|215425966|ref|ZP_03423885.1| protease IV sppA [Mycobacterium tuberculosis T92] Length = 580 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 285 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 344 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 345 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 404 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 405 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 464 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 465 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 524 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 525 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 560 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 34 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 90 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 91 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 150 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 151 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 210 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 211 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 262 >gi|183981078|ref|YP_001849369.1| protease IV, Ssp [Mycobacterium marinum M] gi|183174404|gb|ACC39514.1| protease iv, Ssp [Mycobacterium marinum M] Length = 600 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 17/261 (6%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 P +A +++ G I + + + ++ DD +A+++ + SPG Sbjct: 305 GKPTIAVVSVEGPIVNGRGGPQGLPLGPSSAGGDTIASALREVAADDEVSAIVLRVDSPG 364 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R +Q+ ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 365 GSVTASETIWREVQRARDRGKPVVASMGSIAASGGYYVSMGADAIVANPGTITGSIGVIT 424 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV ++++++ S + + + D Y FV V+ Sbjct: 425 GKLVVRDLKDRLGVGSETLRTNANADAWSIDAPFTDEQRARREAEADMFYTDFVERVARG 484 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN+ + ++ GR+WTGA+A + GL+D +GG + L +++ P Sbjct: 485 RNLRTEDVDAVARGRVWTGADALERGLVDELGGFRTAVRRAKVLAGLDEDTEVRLVGYPG 544 Query: 257 NYWFCDLKNLSISSLLEDTIP 277 + L S + ++P Sbjct: 545 SSLLDLLWPRGSSRPVAASVP 565 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 2/211 (0%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV 99 I+ G+ ++ + + R + D LI + P A + + AI KP Sbjct: 58 IISGGGRPMALRDAVAALHRGAEDPRVAGLIARVQLPPAPIGAVQELREAIAAFSAVKPS 117 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + Y ++ A I + G IG +++ LDK+G+ + V Sbjct: 118 VAWAETYPGTLSYYLATAFREIWMQPSGEAGLIGFASNAMFLRDALDKVGIEAQFVARGE 177 Query: 160 MKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K+ F+E + + +++S + V++SR I L+D E Sbjct: 178 YKSAADLFTEDGYTDANREAVTRMLESLQDQVWQAVAQSRQIDAGVLDELADKAPLLRDE 237 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 A GLID +G ++E + + L + + Sbjct: 238 ALSSGLIDRIGFRDEAYARIAELAGVEGVSP 268 >gi|162148930|ref|YP_001603391.1| peptidase [Gluconacetobacter diazotrophicus PAl 5] gi|209545314|ref|YP_002277543.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter diazotrophicus PAl 5] gi|161787507|emb|CAP57103.1| putative peptidase [Gluconacetobacter diazotrophicus PAl 5] gi|209532991|gb|ACI52928.1| signal peptide peptidase SppA, 36K type [Gluconacetobacter diazotrophicus PAl 5] Length = 313 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 153/295 (51%), Gaps = 9/295 (3%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQI-EDSQELIERIERISR 62 + R ++ L +V S + + H+ R+ + G I D+++LI+ +++ ++ Sbjct: 19 VFWRIAAVASFVLALVGVGGHSLMRSGGFASRDHLVRVRVAGIIGSDNRKLIDLVDKAAK 78 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 DS +I+++ SPGGS GEA+ A+ + RKPV + +AASAGY+IS + + Sbjct: 79 TDSVRGMILAVDSPGGSVSGGEALHDAVARFAARKPVAVTMGGLAASAGYMISVPAQRVF 138 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A +++L GSIGV+ + P V LD++GV + + S PMK +PS ++P+ QM+Q VV Sbjct: 139 AVQSTLTGSIGVIMEAPDVSGLLDRVGVKVDQLVSGPMKGQPSGTQPLSPEGRQMLQGVV 198 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + FV +V++ R++P ++ L+DGR +TG +A +GLID +G + + L + Sbjct: 199 ADLFDQFVTMVADGRHMPVERVRTLADGRPYTGRQALSLGLIDQIGDERDAKAWLTSTRH 258 Query: 243 DQSIRKIKDWN-PPKNYWFCDLKNLSISSLLEDT---IPLMKQTKVQGLWAVWNP 293 + D W + + + D L + + G A+W P Sbjct: 259 LSGTIPVVDLKVTTGQGWMHRITRSMLGVVFGDEWAGSVLSQGVALDGAVAIWKP 313 >gi|119900256|ref|YP_935469.1| putative protease IV [Azoarcus sp. BH72] gi|119672669|emb|CAL96583.1| putative protease IV [Azoarcus sp. BH72] Length = 613 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 10/218 (4%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLS 74 FS + + VA + +G I D ++ L +I D++ A+++ + Sbjct: 314 LFSLRAARPRHRDRVAVLVAQGAIADGEQPASAVGGDTLARQIREAREDNAVKAVVLRID 373 Query: 75 SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGGSA+A E I R ++ + KPV+ + +AAS GY I+ ++ I A T++ GSIG Sbjct: 374 SPGGSAFASEVIRRELELTRRAGKPVVASMSSVAASGGYWIAVGADEIWALPTTVTGSIG 433 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + P V L +LGV + V + P+ P P ++P + MQ ++ Y F+ +V Sbjct: 434 IFAMLPEVSGPLARLGVHVDGVATGPLAGMPDPRRALDPGMAKAMQLGIEHGYRRFLEVV 493 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 +E R + + ++ GR+WTG A ++GL+D +GG + Sbjct: 494 AEGRRMKVGEVDAVARGRVWTGETALELGLVDQLGGVD 531 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 14/207 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L+E I + D+ AL++ G + A+ K KPV+ E Sbjct: 96 DLLEAIRAAADDERIGALVIETDDLAGAGLSKLGELREAVVAFKASGKPVLAR-GERFTQ 154 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS- 168 Y ++ ++ + A + G+ Y K LD LG+ + + K+ PF+ Sbjct: 155 GQYYLATVADEVHLAPDGFLLLQGLARHLTYFKDALDSLGIKLHVFRVGEYKSFSEPFTR 214 Query: 169 -EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV--------LSDGRIWTGAEAK 219 +++ + + +D++D + V+ +R + + L+ A+ Sbjct: 215 NDMSDEDREASRDLLDGLWGAMRGEVARARKLTPEALDRYVLGFADVLAQAGGDPARAAQ 274 Query: 220 KVGLIDVVGGQEEVWQSL-YALGVDQS 245 GL+D + ++E L +G D++ Sbjct: 275 AAGLVDRLSTRDEWRAHLIERVGADKA 301 >gi|323699943|ref|ZP_08111855.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. ND132] gi|323459875|gb|EGB15740.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans ND132] Length = 300 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 4/258 (1%) Query: 12 YVMLSLVTLTVVYFSW----SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT 67 + ++L+T + +F + + + + + G I DS ++ I + DDS Sbjct: 24 ILAMALITGVMAFFRALGWTPGSLALSGDKIGIVHVEGMILDSSRVVRFIRSLEEDDSVK 83 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGS + I+ A++++ KPVI +AAS GY SC + +I A S Sbjct: 84 GVLLRVDSPGGSIAPSQEIYAAVKRLNQVKPVIASYGTVAASGGYYASCPARLIFANSGS 143 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + SIGV+ ++ V ++K G+ + + + KA +P + + M ++ + Sbjct: 144 ITASIGVMAEFVTVADAMEKFGIRPEVLTTGKFKAAGTPLRNLTDAQREQMLGLMQDLHD 203 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 FV V+E+R + + ++DGR TG +A +GLID +G Q + + L + Sbjct: 204 QFVDDVAEARGMERARIAAIADGRAVTGRQALALGLIDRLGTQADAVEELKKETGIEGRA 263 Query: 248 KIKDWNPPKNYWFCDLKN 265 + + + + +L Sbjct: 264 AVIEGPVEERTFVQELMG 281 >gi|117920409|ref|YP_869601.1| signal peptide peptidase SppA, 67K type [Shewanella sp. ANA-3] gi|117612741|gb|ABK48195.1| signal peptide peptidase SppA, 67K type [Shewanella sp. ANA-3] Length = 614 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 16/269 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGSQPAGQIGGDSTAELLRKARFDKHIKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ V +S S ++P+ ++Q ++ Y F+ LV++ R + ++ Sbjct: 444 LASLGIHTDGVSTSEWAG-LSVTRTLSPQIESVIQRHIERGYLDFISLVAKERKMTLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G ++ L R I+ P+ F Sbjct: 503 DSIAQGRVWSGKKALELGLVDELGDIDQAVAKAAKLADLSLFDTRVIEQELTPEQR-FVQ 561 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 S+S+ L + L T ++ + A W Sbjct: 562 QMFASVSAYLPAS--LSHSTLLEQMLAQW 588 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 97/279 (34%), Gaps = 55/279 (19%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 +F+L I ++ + L+T+ S ++ + + G I D ++ ++ IE Sbjct: 24 KFILNLIFFGFLAIILITIG-----SSEDIQVEENSALVLNLAGSIVDQKQQVDPIEAAL 78 Query: 62 R-------------------------DDSATALIVSL---SSPGGSAYAGEAIFRAIQKV 93 + D+ + +++ L G S I A+ + Sbjct: 79 KQGNNGSSDGEILLSDIIYVIDNATHDNRISTIVLDLAELKRAGISKLQS--IGDALNRF 136 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGV 150 K + + Y ++ ++ I GS+ G+ Y K L+KL + Sbjct: 137 KESGKKVVAIGNYYEQNQYFLASFADTIYLNPQ---GSVSLDGLSMYNQYFKSALEKLKI 193 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---- 204 + K+ P+ +++ A + ++ + + + V+E+R I + Sbjct: 194 KAHIFRVGTFKSAVEPYMRDDMSDAAREASSALLADVWQSYTQTVAENRQIDANTLVLDS 253 Query: 205 ------LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L ++G + A + +D + EE + + Sbjct: 254 ASYLAQLDKAEGD--SATMAINMKWVDTLATDEEFRKVM 290 >gi|260772423|ref|ZP_05881339.1| protease IV [Vibrio metschnikovii CIP 69.14] gi|260611562|gb|EEX36765.1| protease IV [Vibrio metschnikovii CIP 69.14] Length = 616 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 16/269 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + +A + G I D + + + +D A+I+ + SPGGSA+A E Sbjct: 324 AKEIAVVVASGAIMDGKQSRGNVGGDTVASLLRQARNNDQVKAVILRVDSPGGSAFASEV 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I I+ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + Sbjct: 384 IRNEIEALKAAGKPVVASMSSLAASGGYWISMSADHIVAQPTTLTGSIGIFSVITTFEKG 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ LG+ V +SP + +N K +Q +++ Y F+ LVSE R + ++ Sbjct: 444 LNHLGIYTDGVGTSPFSGVG-VTTGLNEKVKDAIQMGIENGYQRFISLVSEQRGLSIEEV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ G +WT +A++ GL+D +G ++ Q L + ++ I++ P + Sbjct: 503 DKIAQGHVWTAKDAQQAGLVDTLGDFDDAVQIAANLAQLEHYNLYWIQEPLTPAQRFIKG 562 Query: 263 LKNLSISSL---LEDTIPLMKQTKVQGLW 288 L + + + L L D IP Q Q L Sbjct: 563 LFSEAHAQLGVNLSDLIPNALQPTTQQLL 591 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 98/278 (35%), Gaps = 43/278 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQ---------- 51 F+ I + +LS+ + +Y S S P + G I + Sbjct: 21 FIRLAITNLFFLLSIAVIYFLYLSADSSAPVVKQPSALIVNFSGPIVEQSTSLNPMDSLT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 E++E + DD+ T L+++L P + I +AI + K Sbjct: 81 DSLLGREIPRENVLFEIVETLRHAKNDDNITGLVLALRDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K LDKL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKIYLAPDGAVLLRGYSSYNLYYKSLLDKLNVNTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD---------- 202 + K+ PF +++ +A + + + ++ V+ +R+I Sbjct: 200 FRVGTYKSAVEPFIRDDMSDQARESASQWLSQLWGAYIDDVATNRHIDAQTLNPTMDEFL 259 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + G + +GL+D + +++V L + Sbjct: 260 ALMKQASGN--LADLSLNIGLVDELATRQQVRAQLAEV 295 >gi|145632931|ref|ZP_01788664.1| protease IV [Haemophilus influenzae 3655] gi|144986587|gb|EDJ93153.1| protease IV [Haemophilus influenzae 3655] Length = 615 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKIQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 117/295 (39%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ + +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKFTALFGKGSDGKANLIE 303 >gi|145629711|ref|ZP_01785507.1| protease IV [Haemophilus influenzae 22.1-21] gi|144978048|gb|EDJ87827.1| protease IV [Haemophilus influenzae 22.1-21] Length = 308 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+++ ++SPGGSA+A E I Sbjct: 15 NKIAVVNVEGAIIDGESDEENAGGDTIARILRKAQDDNSVKAVVLRVNSPGGSAFASEII 74 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A E ++ GSIG+ +P + + Sbjct: 75 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADENTITGSIGIFTMFPTFENSI 134 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q + Y F+ +VS+ R + + Sbjct: 135 KKIGVHADGVSTTELANT-SAFSPLAKPVQDIYQTEIQYGYDRFLEIVSKGRQLSKTQVD 193 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 194 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 250 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 251 SLISTLLRDT 260 >gi|326334330|ref|ZP_08200544.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693489|gb|EGD35414.1| signal peptide peptidase SppA [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 607 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 9/250 (3%) Query: 44 RGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 G+I + + +IE + D + A+I+ ++SPGGS A E I R I + Sbjct: 325 DGEIIEGKSQREKIGNETIIESLRDAREDKNIKAIILRINSPGGSGLASELIHREIALTQ 384 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV T + AAS GY I+C SN I A + +L GSIGV P K DK+G+ + Sbjct: 385 KVKPVYTSMGNWAASGGYYIACNSNRIFADKETLTGSIGVFGLIPNAKELADKIGIHSQQ 444 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 V++ P S + K +++ + ++ Y FV+ V++ R + ++K L+ GR+WT Sbjct: 445 VETHPHALTYSLLEKTPEKTREVITEGIERFYKKFVQRVADGRKMTWEKVDSLAQGRVWT 504 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 GA+A K GLID +G +V + S P F + + Sbjct: 505 GADALKHGLIDQIGSLNDVIDYVAKEKNLSSGNYSLIAYPIIEVDFSEFFKKQFQASTRA 564 Query: 275 TIPLMKQTKV 284 + + + ++ Sbjct: 565 ELRFLLREEI 574 Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 93/277 (33%), Gaps = 42/277 (15%) Query: 4 VLKKIKTRYVMLSLVTLTVVY--------------FSWSSHVEDNSPHVARIAIRGQIED 49 + I ++L+ + + + + V + S + +I + Sbjct: 25 IGFFISICLILLAFIGMGSAFSPKKESTKENSILSLDFKKPVYEYSQPIYIKNFNYEITE 84 Query: 50 SQE---LIERIERISRDDSATALIVSLSSPGGSAYAG------EAIFRAIQKVKNRKPVI 100 ++ I+ D +I+ GS I +A+ K + Sbjct: 85 ENTLTAILRAIKYAKTDKHIKGIIL------GSTEGITGKTHLADIRKAVADFKTTGKFV 138 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKS 157 E + Y + ++ + +GS+ G+ + Y K +K G+ ++ + Sbjct: 139 YAFGESISQYDYFLHSVADSLF---LGTLGSVDIQGLSAEVLYYKDLQEKTGIHMEIFRH 195 Query: 158 SPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRI 212 K+ PF E ++ + + + S + + V +SR ++D GR Sbjct: 196 GKYKSAVEPFLENTMSEANREQISAYLHSLWQSYADEVVQSRGFSLSDLNQIADSLWGR- 254 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 T A K L+D + +E SL + + I + Sbjct: 255 -TPELALKHHLVDKIAFHDEFENSLCKVTKSEKIEDL 290 >gi|90579232|ref|ZP_01235042.1| putative protease IV [Vibrio angustum S14] gi|90440065|gb|EAS65246.1| putative protease IV [Vibrio angustum S14] Length = 615 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 17/260 (6%) Query: 22 VVYFSWSSHVED----NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + Y+ + S + D ++ VA + G I D + + + D+ + Sbjct: 306 ISYYDYLSMLVDDQKPSNNKVAVVVASGAIVDGKSSQGTAGGDTIAALLRKARFDNDVKS 365 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 366 VILRVDSPGGSAFASEVIRNEVDALKAAGKPVVVSMSSVAASGGYWISSSADKIIAQPTT 425 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+KLGV V ++P + ++ Q VD+ Y Sbjct: 426 ITGSIGIFAILTTFEKSLEKLGVYSDGVGTTPFSGVG-VTRALPENVGKVFQLGVDNGYQ 484 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LVS+ R++ ++ ++ GR+WTG +AK+ GL+D +G + +L + Sbjct: 485 RFIGLVSKYRHMSLEQADKIAQGRVWTGKDAKERGLVDELGDFDTAITEAVSLAKVDDYQ 544 Query: 248 KIKDWNP--PKNYWFCDLKN 265 + P P +F ++ Sbjct: 545 LVWMQQPLSPIQQFFKEMSG 564 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 104/297 (35%), Gaps = 52/297 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ--------- 51 + F K I +L + + + E + + G I + + Sbjct: 19 INFARKFILNLIFLLIVGAIIFAFSDNDDSAEKPEASALVLNLSGPIVEQKNYDNPLDSV 78 Query: 52 ----------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVK 94 +++E I + D S T L+++L + P S I +AIQ+ K Sbjct: 79 ISDVMGQPPVEQNVLFDIVEAIRTATTDSSITGLVLNLKNMPETSLTKLRYIAKAIQEFK 138 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKL 148 KPV + S Y ++ ++ I + G++ Y K L+KL Sbjct: 139 ASGKPVYAYGGHYSQS-QYYLASYADKIFMSPDG-----GIMLTGYGTYTLYYKTLLEKL 192 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK--- 203 V+ + K+ P+ ++ A + +D + + V+++RNI Sbjct: 193 DVTTHVFRVGTYKSFVEPYIRDGMSAAAKEANTVWLDQLWDAYTSDVAKNRNIDAKSLTP 252 Query: 204 -----TLVLS--DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 L+ +G +KK+GL+D + + ++ Q L D K + Sbjct: 253 EMNSFVEQLTAVNGDF--AQLSKKMGLVDQLVTRPQLSQILIKEFGDNGEHSFKQIS 307 >gi|167968282|ref|ZP_02550559.1| protease IV sppA [Mycobacterium tuberculosis H37Ra] gi|215402507|ref|ZP_03414688.1| protease IV sppA [Mycobacterium tuberculosis 02_1987] gi|215410281|ref|ZP_03419089.1| protease IV sppA [Mycobacterium tuberculosis 94_M4241A] gi|254549685|ref|ZP_05140132.1| protease IV sppA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260199734|ref|ZP_05767225.1| protease IV sppA [Mycobacterium tuberculosis T46] gi|260203895|ref|ZP_05771386.1| protease IV sppA [Mycobacterium tuberculosis K85] gi|294996206|ref|ZP_06801897.1| protease IV sppA [Mycobacterium tuberculosis 210] gi|297633223|ref|ZP_06951003.1| protease IV sppA [Mycobacterium tuberculosis KZN 4207] gi|297730203|ref|ZP_06959321.1| protease IV sppA [Mycobacterium tuberculosis KZN R506] gi|306796479|ref|ZP_07434781.1| protease IV sppA [Mycobacterium tuberculosis SUMu006] gi|313657530|ref|ZP_07814410.1| protease IV sppA [Mycobacterium tuberculosis KZN V2475] gi|308343138|gb|EFP31989.1| protease IV sppA [Mycobacterium tuberculosis SUMu006] gi|323720851|gb|EGB29918.1| protease IV sppA [Mycobacterium tuberculosis CDC1551A] Length = 600 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 305 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 364 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 365 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 424 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 425 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 484 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 485 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 544 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 545 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 580 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 54 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 110 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 111 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 170 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 171 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 230 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 231 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 282 >gi|260185606|ref|ZP_05763080.1| protease IV sppA [Mycobacterium tuberculosis CPHL_A] Length = 590 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 305 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 364 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 365 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 424 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 425 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 484 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 485 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 544 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 545 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 580 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 54 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 110 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 111 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 170 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 171 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 230 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 231 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 282 >gi|118462440|ref|YP_883579.1| signal peptide peptidase SppA, 67K type [Mycobacterium avium 104] gi|254776880|ref|ZP_05218396.1| signal peptide peptidase SppA, 67K type [Mycobacterium avium subsp. avium ATCC 25291] gi|118163727|gb|ABK64624.1| signal peptide peptidase SppA, 67K type [Mycobacterium avium 104] Length = 595 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 17/259 (6%) Query: 36 PHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSPGGS 79 P VA I + G + D S + + + DD+ +A+++ ++SPGGS Sbjct: 302 PTVAVINVDGTLVDGRGGPHFLPFGAATVGSDTIAPALREAAADDAVSAIVLRVNSPGGS 361 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E ++R +++ + R KPV+ + +AAS GY +S A++ IVA ++ GSIGV+ Sbjct: 362 VTASETLWREVKRARERGKPVVASMGAVAASGGYYVSVAADAIVANPATITGSIGVITGK 421 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ L +LGV +V+++ S + P+ + D Y FV V+E RN Sbjct: 422 LVIRDLLGRLGVGSDTVRTNANADAWSIDAPFTPEQRAHREAEADLVYTDFVSRVAEGRN 481 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + D ++ GR+WTGA+A + GL+D +GG + L ++ P Sbjct: 482 LTTDAVERVARGRVWTGADAHERGLVDELGGFRIAVRRAKILAGLDEDADVRIVTYPSGS 541 Query: 259 WFCDLKNLSISSLLEDTIP 277 L+ + S ++P Sbjct: 542 LLDVLRPRASSQPAAVSLP 560 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 95/248 (38%), Gaps = 12/248 (4%) Query: 48 EDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 ++ ++ I R + D LI + SP + A + + AI KP + Sbjct: 66 ASLRDTVDAIHRAAEDPRVAGLIARVQLAPSP---SAAVQELREAIVAFTAAKPSLAWAE 122 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + Y ++ A I VG IG +++ LDK G+ + V K+ Sbjct: 123 TYPGTLSYYLASAFGEIWMQPGGSVGLIGFASNATFLRDALDKAGIEAQFVARGEYKSAV 182 Query: 165 SPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + F+E + + ++DS + V+ESR + D L+D +A G Sbjct: 183 NRFTEHGFTEAHREAVTRMLDSVQEQVWQAVAESRKLDTDALDALADRAPLLRQDALDSG 242 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 L+D +G +++ + + L Q + D PP+ + + S L +P + Sbjct: 243 LVDRIGFRDQAYDRIAELVGVQDVSP--DTEPPR--LYVSRYAGAARSRLSPPVPSLPGR 298 Query: 283 KVQGLWAV 290 + AV Sbjct: 299 RRPPTVAV 306 >gi|89073275|ref|ZP_01159805.1| putative protease IV [Photobacterium sp. SKA34] gi|89050985|gb|EAR56449.1| putative protease IV [Photobacterium sp. SKA34] Length = 615 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 17/272 (6%) Query: 22 VVYFSWSSHVED----NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + Y+ + S + D + VA I G I D + + + D+ + Sbjct: 306 ISYYDYLSMLVDDQKPSDNKVAVIVASGAIVDGKSSQGTAGGDTIAALLRKARFDNDVKS 365 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 366 VILRVDSPGGSAFASEVIRNEVDALKAAGKPVVVSMSSVAASGGYWISSSADKIIAQPTT 425 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+KLGV V ++P + ++ Q VD+ Y Sbjct: 426 ITGSIGIFAILTTFEKSLEKLGVYSDGVGTTPFSGVG-VTRALPENIGKVFQLGVDNGYQ 484 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LVS+ R++ ++ ++ GR+WTG +AK+ GL+D +G + +L + Sbjct: 485 RFIGLVSKYRHMSLEQADKIAQGRVWTGKDAKERGLVDELGDFDTAITEAVSLAKIDDYQ 544 Query: 248 KIKDWNP--PKNYWFCDLKNLSISSLLEDTIP 277 + P P +F ++ + + ++ I Sbjct: 545 LVWMQQPLSPIQQFFKEMSSEVKAQVVAMVIG 576 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 109/301 (36%), Gaps = 57/301 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ--------- 51 + F K I +L + + + E + + G I + + Sbjct: 19 INFARKFILNLVFLLIVGAIIFAFSDNDESPEKPEASALVLNLSGPIVEQKNYDNPLDSV 78 Query: 52 ----------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVK 94 +++E I + D S T L+++L + P S I +AIQ+ K Sbjct: 79 ISDVMGQPPVEQNVLFDIVEAIRTATTDSSITGLVLNLKNMPETSLTKLRYIAKAIQEFK 138 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKL 148 KPV + S Y ++ ++ I + G++ + Y K L+KL Sbjct: 139 ASGKPVYAYGGHYSQS-QYYLASYADKIFMSPDG-----GIMLKGYGTYTLYYKTLLEKL 192 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP------ 200 V+ + K+ P+ ++ A + +D + + V+++RNI Sbjct: 193 DVTTHVFRVGTYKSFVEPYIRDGMSTPAKEANTVWLDQLWDAYTSDVAKNRNIDAKTLTP 252 Query: 201 -----YDKTLVLSDGRIWTGAEAKKVGLIDVVGG---QEEVWQSLYALGVDQSIRKIKDW 252 ++ + + +G +KK+GL+D + ++ + + S ++I + Sbjct: 253 EMNSFIEQLIAV-NGDF--AQLSKKMGLVDELVTRPQLSQILMKEFGDNGEHSFKQISYY 309 Query: 253 N 253 + Sbjct: 310 D 310 >gi|86148498|ref|ZP_01066787.1| protease IV [Vibrio sp. MED222] gi|85833738|gb|EAQ51907.1| protease IV [Vibrio sp. MED222] Length = 616 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 11/219 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I G I D + + DD A+++ + SPGGSA+A E I Sbjct: 327 VAVIVASGAIMDGKQPRGTVGGDTTAALLRQARNDDKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS ++ I+A T+L GSIG+ + L+ Sbjct: 387 EIEAIKQAGKPVVVSMSSLAASGGYWISMGADKILAQPTTLTGSIGIFSVITTFEKGLND 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV V +SP + ++ A Q +++ Y F+ LV E+R + D + Sbjct: 447 IGVYTDGVGTSPFSGLG-ITTGLSDGAKDAFQMGIENGYRRFISLVGENRGMEVDTVDKI 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + GR+WTG +A + GL+D +G ++ + +L ++ Sbjct: 506 AQGRVWTGQDAIEKGLVDEIGDFDDAITAAASLAELETY 544 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 101/285 (35%), Gaps = 61/285 (21%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ------ 51 FV + + +LS+ + VYF H + P V + + G I + Sbjct: 21 FVRLALVNLFFLLSIAIIYFVYF----HSDTTQPTVPQESALVLNLSGPIVEQSRYINPM 76 Query: 52 -------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 +++E I DD T ++++L P + I +A+ Sbjct: 77 DSVTGSLLGKDLPKENVLFDIVETIRYAKDDDKVTGIVLALKELPETNLTKLRYIAKALN 136 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-----VKPFL 145 + K KP+ S Y ++ + + + GVL + K L Sbjct: 137 EFKATGKPIYAVGDFYNQS-QYYLASYATKVFLSPDG-----GVLLKGYSAYSLFYKTLL 190 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 +KL V+ + K+ PF +++ A + + + +V VS +R I Sbjct: 191 EKLDVNTHVFRVGTYKSAIEPFIRDDMSDAAKESASRWLGQLWGAYVDDVSNNRQIDAKT 250 Query: 203 ---------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 K L DG I A+K+GL+D + +++V L Sbjct: 251 LNPSMDSFLKDLESVDGDI--AKLAEKLGLVDELATRQQVRLELA 293 >gi|120598749|ref|YP_963323.1| signal peptide peptidase SppA, 67K type [Shewanella sp. W3-18-1] gi|146293174|ref|YP_001183598.1| signal peptide peptidase SppA, 67K type [Shewanella putrefaciens CN-32] gi|120558842|gb|ABM24769.1| signal peptide peptidase SppA, 67K type [Shewanella sp. W3-18-1] gi|145564864|gb|ABP75799.1| signal peptide peptidase SppA, 67K type [Shewanella putrefaciens CN-32] gi|319426314|gb|ADV54388.1| signal peptide peptidase SppA, 67K type [Shewanella putrefaciens 200] Length = 615 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 14/254 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + E + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGKQPAGQIGGDSTAELLRKARFDKHIKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD +G+ V +S S ++ ++Q ++ Y F+ LV++ RN+ ++ Sbjct: 444 LDSIGIHTDGVSTSEWAG-LSVTRTLSSSVEAVIQRHIERGYLNFISLVAKERNMTLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G +E L R I+ P+ F Sbjct: 503 DSIAQGRVWSGKKALELGLVDELGDIDEAIAKAAKLANLNLFDTRVIEQELTPEQ-LFIQ 561 Query: 263 LKNLSISSLLEDTI 276 S+SS L ++ Sbjct: 562 QMFASVSSYLPASL 575 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 91/273 (33%), Gaps = 44/273 (16%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI---- 60 +K+ + ++ + ++ + ++ + + G I D ++ I+ IE Sbjct: 22 TRKLILNLIFFGILAVIMISITAGEDIQVEDNSALVLNLAGSIVDQKQQIDPIEAALKQG 81 Query: 61 ---------------------SRDDSATALIVSL---SSPGGSAYAGEAIFRAIQKVKNR 96 ++D T L++ L G S I AI + K Sbjct: 82 NKANADGEILLADVLYVIDNAAQDTRITTLVLDLADLKRAGISKLQS--IGNAINRFKES 139 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + + Y ++ ++ I + G+ Y K L+KL + + Sbjct: 140 GKQVVAIGNYYEQNQYFLASFADTIYLNPQGGISLDGLSMYNLYFKSALEKLKIKAHIFR 199 Query: 157 SSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---------- 204 K+ P+ +++ A + ++ + + + V+ +RNI Sbjct: 200 VGTFKSAVEPYMRDDMSDAAKEANSALLADVWQSYTQTVANNRNIDASALVLDASTYLAE 259 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L + G + A + +D + E+ +++ Sbjct: 260 LDKAQGD--SATMAINMKWVDSLATAEDFRKTM 290 >gi|148240231|ref|YP_001225618.1| periplasmic serine proteases (ClpP class) [Synechococcus sp. WH 7803] gi|147848770|emb|CAK24321.1| Periplasmic serine proteases (ClpP class) [Synechococcus sp. WH 7803] Length = 270 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 5/252 (1%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 IAI G I S + +++ + + AL++ + SPGG+ + I A+ +++ + Sbjct: 16 IAIEGAISGSTRRRVLKALREVQE-REFPALLLRIDSPGGTVGDSQEIHAALLRLRAKGC 74 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G + A+ IVA ++ GSIGV+ + + L+K+G+ ++VKS Sbjct: 75 RVVASFGNISASGGVYVGVAAETIVANPGTITGSIGVILRGNNLSELLNKIGIRFETVKS 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++ Q++QD++DSSY FV V+E R + D +DGR+++GA+ Sbjct: 135 GAYKDILSPDRALSADERQLLQDLIDSSYDQFVAAVAEGRGLEPDAVKAFADGRVFSGAQ 194 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 AK++GL+D +G +E+ L +D+ K P+ L ++ S ++ + Sbjct: 195 AKELGLVDELGDEEQARVLAARLADLDEERCKPVTLGKPRKSLLQGLPGSALLSAVQQRL 254 Query: 277 PLMKQTKVQGLW 288 + Q LW Sbjct: 255 SAELELSGQLLW 266 >gi|325478882|gb|EGC81992.1| signal peptide peptidase SppA, 36K type [Anaerococcus prevotii ACS-065-V-Col13] Length = 327 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 133/264 (50%), Gaps = 7/264 (2%) Query: 32 EDNSPHVARIAIRGQI--EDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ + + + G I D+ + +E +++ D +I+ ++SPGGS YA E I Sbjct: 57 TNSKEKIKIVDVDGVIQSNDANDFAVEELKKAKEDPLVKGVILRVNSPGGSVYASEKIAN 116 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV T + EMAAS GY IS ++ I A+ + GSIGV+ Q ++ +K Sbjct: 117 QIKALKEADKPVYTVMEEMAASGGYYISAPTDRIYASNETWTGSIGVIIQSKSLQGLFEK 176 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ +++ + MK S ++N Q +VDS++ FV++V+E R + + + Sbjct: 177 YGIKEQNITTGKMKDAGSVGRDMNDDEKAYFQGLVDSAFDRFVKIVAEGRGLSEREVRKI 236 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK--DWNPPKNYWFCDLKN 265 +DGR++ G++A +GL+D +G + + + I+ D N F + Sbjct: 237 ADGRVYDGSQALNIGLVDKIGDLDLAISEMTSENGLNDPMVIENNDVMSSFNSLFSKAMD 296 Query: 266 LSI-SSLLEDTIPLMKQTKVQGLW 288 L SS L ++K+ ++ ++ Sbjct: 297 LKKESSDLAILDKMIKENDMKPMY 320 >gi|167570707|ref|ZP_02363581.1| peptidase, U7 family protein [Burkholderia oklahomensis C6786] Length = 332 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 14/269 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 S + H A + I G+I +++++ ++ D +++ ++SPGGS Sbjct: 68 VSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINSALDSAFEDSGTAGVVLRINSPGGS 127 Query: 80 AYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 ++ I++++ + KP+ V +M AS GY I+ A++ I + S+VGSIGVL Sbjct: 128 PVQAGIVYDEIRRLRKKYPAKPLYVVVTDMCASGGYYIASAADKIYVDKASVVGSIGVLM 187 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + KLGV + S K PFS PK Q+++D + F++ V + Sbjct: 188 DGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMDAHAQEMLDEIHEQFIKAVKDG 247 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + + G WTGA++ ++GL D G + V + + + D+ + Sbjct: 248 RGARLHDSPDIFSGLFWTGAKSIELGLADDFGTTDTVARDVL------KAPDLVDYTVKE 301 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + + + ++++ Sbjct: 302 SLTNRVARRFGAAVGSAALKAAVAGSELK 330 >gi|167563547|ref|ZP_02356463.1| peptidase, U7 family protein [Burkholderia oklahomensis EO147] Length = 332 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 14/269 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 S + H A + I G+I +++++ ++ D +++ ++SPGGS Sbjct: 68 VSGDGGKLASGRHTAVVTIDGEIAASTNANAEDINSALDSAFEDSGTAGVVLRINSPGGS 127 Query: 80 AYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 ++ I++++ + KP+ V +M AS GY I+ A++ I + S+VGSIGVL Sbjct: 128 PVQAGIVYDEIRRLRKKYPAKPLYVVVTDMCASGGYYIASAADKIYVDKASVVGSIGVLM 187 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + KLGV + S K PFS PK Q+++D + F++ V + Sbjct: 188 DGFGFTGLMGKLGVERRLHTSGENKGFFDPFSPETPKMDAHAQEMLDEIHEQFIKAVKDG 247 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + + G WTGA++ ++GL D G + V + + + D+ + Sbjct: 248 RGARLHDSPDIFSGLFWTGAKSIELGLADDFGTTDTVARDVL------KAPDLVDYTVKE 301 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + + + ++++ Sbjct: 302 SLTNRVARRFGAAVGSAALKAAVAGSELK 330 >gi|309790773|ref|ZP_07685320.1| signal peptide peptidase SppA, 36K type [Oscillochloris trichoides DG6] gi|308227192|gb|EFO80873.1| signal peptide peptidase SppA, 36K type [Oscillochloris trichoides DG6] Length = 342 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 14/271 (5%) Query: 36 PHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I + G I +++ +I++ ++D A+++ + SPGG A Sbjct: 73 DRVVIIEVSGTIGVASDPFGSSLGQNDILSQIKQAAKDPLVRAVVLRVDSPGGGVVASSE 132 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + K++ K ++ + AAS GY IS + I A + + GS+GV+ Sbjct: 133 IHAELVKLREAGKTLVVSMGATAASGGYYISAPAERIYANKDTFTGSLGVILSLTNYGEA 192 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 D LG+ KS +K SP E + ++Q VVD +Y FV ++ E R +P ++ Sbjct: 193 FDNLGLKSYVYKSGNLKDIGSPLREPTAEENAVLQRVVDEAYQGFVDVIVEGRGLPRERV 252 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++DGRI+TGA+A ++GL+D +G EE L S + + + L Sbjct: 253 LEIADGRIYTGAQALELGLVDELGNLEEAIAGAMELANLDS-ALVVRYTSSSSLRSLLLS 311 Query: 265 NLSISSLLEDTIPL--MKQTKVQGLWAVWNP 293 LS D + L + L W P Sbjct: 312 RLSAPQATSDPLGLRNITDPPAPVLEYRWRP 342 >gi|294635913|ref|ZP_06714359.1| signal peptide peptidase SppA [Edwardsiella tarda ATCC 23685] gi|291090759|gb|EFE23320.1| signal peptide peptidase SppA [Edwardsiella tarda ATCC 23685] Length = 617 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 22/269 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + +A I G I D + +I + D + A+I+ ++SPGGS A Sbjct: 321 KSGKGQIAVIFASGAIIDGEATPGSVGGDTTANQIRQARLDPAIRAIILRVNSPGGSVTA 380 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + ++ KPV+ + +AAS GY IS +N I+A+ T+L GSIG+ Sbjct: 381 SEEIRSELAAARSAGKPVVVSMGGLAASGGYWISTPANYIIASPTTLTGSIGIFGVINTF 440 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L+KLGV V +S + + + +MQ + + Y F+ LV+E+R+ Sbjct: 441 EKPLNKLGVYTDGVATSSLADT-ALTKALPQSVSDLMQLTIANGYQRFINLVAEARHKTP 499 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ ++ GR+W G +AK GL+D +G ++ L + P+ W+ Sbjct: 500 EQVDQIAQGRVWLGIDAKANGLVDQLGDFDDAVAKAAQLAGIKQ---------PRLQWYV 550 Query: 262 DLKNLS--ISSLLEDTIPLMKQTKVQGLW 288 D ++ + S L ++ +QG+ Sbjct: 551 DTPSVGEMLLSQLTGSVQASLPQALQGVV 579 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 72/162 (44%), Gaps = 5/162 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L++ + + D + T L++SL++ G+ + +A+ + + KP+I + Sbjct: 98 DLVDTLRQAKDDANITGLVLSLNNFVGADQPSLRYLGKALSEFRASGKPIIAVGESYS-Q 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ ++ I + V G+ Y K LDKL VS + K+ P Sbjct: 157 AQYFLASYADKIYLSPQGSVALQGMATNNLYYKSLLDKLDVSTHIFRVGTYKSAVEPLMR 216 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +++P+A ++ + ++ V+ +R++ + +D Sbjct: 217 DQMSPQARSADSQWLNGMWDNYLTTVAANRHLSVQQLFPGAD 258 >gi|163801948|ref|ZP_02195845.1| cytoplasmic asparaginase I [Vibrio sp. AND4] gi|159174456|gb|EDP59260.1| cytoplasmic asparaginase I [Vibrio sp. AND4] Length = 616 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 13/269 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 + + ++ +A + G I D Q+ + + + DD A+++ + SP Sbjct: 315 TMAPNLTPAVDDIAVVVASGAIMDGQQPRGTVGGDTVASLLRQARNDDKVKAVVLRVDSP 374 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I ++ +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 375 GGSAFASEVIRNEVEALKEAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIF 434 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + +KLG+S V +SP + + ++ A Q Q ++ Y F+ LV Sbjct: 435 SVITTFEKGFNKLGISTDGVGTSPFSGDG-ITTGLSDGASQAFQLGIEHGYKRFISLVGS 493 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWN 253 +R + ++ ++ GR+WTG +A GL+D +G ++ Q L ++ + +++ Sbjct: 494 NREMSLEEVDKVAQGRVWTGQDAMSFGLVDQMGDFDDAVQLAAKLAEVENYQLYWVEEPL 553 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 P + + N SL D + ++ Sbjct: 554 SPAEQFVQEFMNQVKVSLGIDATSFLPKS 582 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 99/275 (36%), Gaps = 58/275 (21%) Query: 14 MLSLVTLTVVYFSWSSHVEDN----SPHVARIAIRGQIEDSQ------------------ 51 ++ LV + V YF++S ED + + G I + + Sbjct: 29 LIFLVMIAVFYFAFSYTGEDKPAIEKESALVMNLSGPIVEQRRYVNPMDSVAGSILGNEM 88 Query: 52 -------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 ++++ I D + L+++L P + I +A+ + K KPV Sbjct: 89 PKENVLFDIVDTIRYAKDDPKVSGLVLALRDMPETNLTKLRYIAKALNEFKTSGKPVYAV 148 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVKS 157 S Y ++ ++ I A GVL + Y K LDKL VS + Sbjct: 149 GDFYNQS-QYYLASYADKIFLAPDG-----GVLIKGYSSYSMYYKALLDKLDVSTHVFRV 202 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-----------KT 204 K+ PF +++ A + + + FV V+ +RNI + Sbjct: 203 GTYKSAIEPFIRDDMSDAAKESATRWITQLWDAFVDDVATNRNIDAKALNPTMDELLTEI 262 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + DG A K+GL+D + +++V + Sbjct: 263 KSV-DGD--LAQLAVKMGLVDELATRQDVRKRFAK 294 >gi|294617411|ref|ZP_06697045.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1679] gi|291596317|gb|EFF27576.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1679] Length = 341 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++++ G I + + +E+++ I D + + + ++SPGG Sbjct: 55 GDSTQKIVKLSVDGTIAAGGSSGLFASEGYNHKNFMEQLKAIEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FV +VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEETVLQAYIDSAYSRFVAIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN ++ ++DGRI+ G +AK+VGL+D +G E+ +++ + ++ + P Sbjct: 235 RNKSEEEVKKIADGRIYDGVQAKEVGLVDELGFPEDALKAMRKEQQLEDAELVEYSSAPS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|297538693|ref|YP_003674462.1| peptidase S49 [Methylotenera sp. 301] gi|297258040|gb|ADI29885.1| peptidase S49 [Methylotenera sp. 301] Length = 327 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 10/258 (3%) Query: 8 IKTRYVMLS--LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERI 60 I + +M + + L + H A I + G IE ++ + + Sbjct: 45 IFFKGLMFAYLFIILFLAMGWLGGGKSSTGSHTALIEVAGVIEAGGAVNADSFMSSLHDA 104 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISCA 117 D + +I+ ++SPGGS I I++ K + PV V ++ AS GY I+ A Sbjct: 105 YDDKNTKGIILRINSPGGSPVQAGIINDEIKRQKKLHPKIPVYAVVEDICASGGYYIAAA 164 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL + K+GV + + + KA PFS VNPK + Sbjct: 165 ADKIYVDKASIVGSIGVLMDGYGFTEVMKKVGVERRLLTAGENKAMLDPFSPVNPKHQAL 224 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q +++ + F +V + R +T G W+G E+ K+GL D +G + V + + Sbjct: 225 AQAMLNEIHEQFKTVVRQGRGSRLKETPETFSGLFWSGEESIKMGLADALGSADYVARDV 284 Query: 238 YALGVDQSIRKIKDWNPP 255 +D+ Sbjct: 285 IKEEKIVDFTSQEDFTSR 302 >gi|296121657|ref|YP_003629435.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] gi|296013997|gb|ADG67236.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] Length = 649 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 124/254 (48%), Gaps = 10/254 (3%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 + G++ S+ I+ + ++ DD+ A+++ + SPGGSA A + ++ ++ +K +KP++ Sbjct: 372 PLSGEVLGSETFIKAVRQLRDDDTVKAVVLRIDSPGGSALASDLMWHELELLKAKKPLVA 431 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + ++A S GY I+ + I AA ++ GSIGV+ ++ +KLG+++ ++ Sbjct: 432 SMSDVAGSGGYYIAMGTQKIYAAPGTVTGSIGVVGGKVALEKLYNKLGINVVVLERGKNS 491 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 S + + + +++ Y F + R + + L+ GRI++G A ++ Sbjct: 492 GVLSTTTGFTESQREATRLLMNEIYEQFTSKAAAGRKMEVAQLEKLARGRIYSGNRALEI 551 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK--NYWFCDLKNLSISSLLE------ 273 GL+D +G E+ + AL ++ K++ PK + L + S +E Sbjct: 552 GLVDEIGTLEDAIKGAIALAKIENPAKLERLELPKPGSPLESLLGPMGAESRMEARLEQR 611 Query: 274 --DTIPLMKQTKVQ 285 D IP Q +Q Sbjct: 612 LKDLIPTALQPALQ 625 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 26/271 (9%) Query: 37 HVARIAIRGQIEDSQ--------------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 +A + I G + + LI R+++ + D +++ G A Sbjct: 86 KIAHLKISGALTEGAPLEGLFGETSETLFTLIARLDKAAADKEIQTVVLEF---GDLALG 142 Query: 83 GEAIFR---AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I+ AI +++ K V + A + YL++ A + IV E +++ GV + Sbjct: 143 RGKIYELRSAIARIRAAGKDVWAYLDS-ADTTAYLLASACDKIVMPEPAMLMIPGVRAEV 201 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + K L K+ V + V+ K+ P++ +++P+ + M +++D Y V ++ES Sbjct: 202 WFYKEMLSKIDVEPEVVRIGEFKSAGEPYTRKDMSPEFKKEMDELLDDVYSQIVSTIAES 261 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R IP DK L D ++T +AK GL+D V + ++ + S + +++ K Sbjct: 262 RKIPADKVRELIDTAVFTSEKAKSAGLLDEVQYESGLYDVIKKSHNVTSAKLTRNYGRKK 321 Query: 257 NYWFCDLKNLSISSL--LEDTIPLMKQTKVQ 285 N I+ + L P +++ Sbjct: 322 TDADLSGLNGIITLMNALSGQTPASRKSSAP 352 >gi|193212213|ref|YP_001998166.1| signal peptide peptidase SppA, 67K type [Chlorobaculum parvum NCIB 8327] gi|193085690|gb|ACF10966.1| signal peptide peptidase SppA, 67K type [Chlorobaculum parvum NCIB 8327] Length = 578 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 16/292 (5%) Query: 17 LVTLTVVYFSWSSHVE--DNSPHVARIAIRGQIE-------------DSQELIERIERIS 61 LV Y S + +E +A I I G I D + ++ Sbjct: 258 LVVNAGSYLSSTGDLEPHGTGNRIAVITINGLIVGDSIAGMGDDEEIDVASVRRAVDAAL 317 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D A+++ + SPGG A A ++ +++ +KP++ + AAS GY+++ A+N I Sbjct: 318 DDSKVKAIVLRIDSPGGEALAASSMLELLEEAAQKKPLVASMSGSAASGGYMVALAANKI 377 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++ GSIGV P L+K G+ + + +PF + A + + Sbjct: 378 YAQPLTVTGSIGVFALKPDFSGLLEKTGIHREVLTRGRFADAYTPFKPFDDAAFRKFVET 437 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 Y F V++SR++ ++ ++ GR+W+G A +VGL+D +GG + Q L Sbjct: 438 TGHIYEDFTGKVAKSRHLTAEQVEAVAGGRVWSGKRAVEVGLVDEIGGLNDAVQEASRLA 497 Query: 242 VDQSIRKIK-DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + K + + P + W + + D + + L V Sbjct: 498 KLKKGTKPEMLYLPARKTWIERFFDGDAVQAVADMSDHLATQSLARLLPVSQ 549 Score = 92.9 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 106/248 (42%), Gaps = 27/248 (10%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------QELI 54 V+L ++ + V+ + S + V R+ ++GQIE+ + L+ Sbjct: 2 VVLFVLLIGGVWLASSWSDKLPERFVLRVPVKGQIEERSPDSGLFSFGQRAEPLSLEALM 61 Query: 55 ERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++R D ++++ + G S + + +I ++ +T + A Sbjct: 62 TILDRAQSDKRVESVLLDID---GLSTSTAKIQELSSSIDALRKSGKKVTALLRTPADKD 118 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV- 170 YL++ A + I+ + S + G + + L KLG+ ++ + K+ P++ Sbjct: 119 YLLAVACDSIIVQKNSWMQLDGFKAELFFFAEPLKKLGIGFQAAQWKKYKSAIEPYTRNS 178 Query: 171 -NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDVVG 228 +P+++Q + ++D S+ ++ V+ R+I D + D + T +A + LID V Sbjct: 179 PSPESLQELNSLLDDSWANYLDQVARRRHIGRDAFREVIDSLAVLTPEQALERKLIDRVL 238 Query: 229 GQEEVWQS 236 ++ + Sbjct: 239 SIRQLEKE 246 >gi|94266274|ref|ZP_01289979.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] gi|93453125|gb|EAT03596.1| Peptidase S49, SppA [delta proteobacterium MLMS-1] Length = 306 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 114/213 (53%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I + +L+ ++ R D+ A+++ + SPGG+ A + +F +++V +KPV+ + + Sbjct: 61 ITSADQLLAQLAEFGRRDNIKAIVLRIDSPGGAVGASQELFAEVKRVNQQKPVVAAMGSV 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS G + + IVA +L GSIGV+ ++ ++ +++G +++KS +K +P Sbjct: 121 AASGGLYAALGAERIVANPGTLTGSIGVIIKFANLEELFERIGYRSETIKSVDLKDSGAP 180 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P+ QM+Q++VD + F+ V+ R++ DGRI++G +A ++GL+D Sbjct: 181 DRPLAPEERQMLQEMVDDVHDQFIADVAADRDLSTTTVRAFGDGRIFSGNQALELGLVDQ 240 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 +G + LG R + PP+ + Sbjct: 241 LGNFNDAAMLAAELGGLDPSRVPELIYPPRRDF 273 >gi|289760851|ref|ZP_06520229.1| protease IV sppA [Mycobacterium tuberculosis GM 1503] gi|289708357|gb|EFD72373.1| protease IV sppA [Mycobacterium tuberculosis GM 1503] Length = 364 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 69 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 128 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 129 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 188 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 189 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 248 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 249 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 308 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 309 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 344 >gi|157962074|ref|YP_001502108.1| signal peptide peptidase SppA [Shewanella pealeana ATCC 700345] gi|157847074|gb|ABV87573.1| signal peptide peptidase SppA, 67K type [Shewanella pealeana ATCC 700345] Length = 613 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 14/268 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + V I +G I + E + + DDS A+++ + SPGGSA+A E Sbjct: 324 NDQVGIIVAKGNILNGSQPAGQIGGDSTSELLRKARFDDSIKAVVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQEVLALKAANKPVVVSMGSYAASGGYWISASADYIYATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y+ F+ LV++ R++ D+ Sbjct: 444 LASIGVHTDGVGTSEWAGF-SVTKGLSPQIQAVIQRHIERGYYDFISLVAKERDMSLDQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+WTG +A ++GL+D +G ++ + +D ++ + F Sbjct: 503 DSIAQGRVWTGRKALELGLVDGLGELQDAVTKAAEMASLDTFDTEVIERELSPQEQFIQE 562 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + SS L ++ + + ++ + + W Sbjct: 563 MFATASSHLPPSV--TQSSLLETILSQW 588 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 54/278 (19%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 L+K+ + ++ L +V S VE + + + G I D + ++ IE + Sbjct: 22 LRKLFLNLIFFGVIALIIVSLSTDDGVEVENGAALVLNLSGTIVDQKRQVDPIEAAMKSG 81 Query: 63 -----------------------DDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVK 94 D+ + L++ L G I AI K Sbjct: 82 NEADGSGEILLSDVLYVIDNAASDERISQLVLDL----GMLRGTGISKLQSIGNAIDSFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVS 151 + Y ++ ++ + GS+ + Y K L+KL ++ Sbjct: 138 ATGKTVVANGNWYGQNHYFLASFADKVYLNPQ---GSVEIEGLGRYRLYFKSALEKLKIN 194 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT----- 204 + K+ PF +++ +A + +++ + + V+ +R I + Sbjct: 195 AHVFRVGTFKSAVEPFIRDDMSDEAKEANLVLLNDLWRSYADTVAANRGINSNDLSLSAD 254 Query: 205 -----LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L +DG+ + A + +D + EE S+ Sbjct: 255 DYLAQLDKADGK--SADMAVNMKWVDGLKSAEEFRLSM 290 >gi|30249027|ref|NP_841097.1| U7 family peptidase [Nitrosomonas europaea ATCC 19718] gi|30138644|emb|CAD84935.1| Peptidase family U7 [Nitrosomonas europaea ATCC 19718] Length = 317 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 117/242 (48%), Gaps = 9/242 (3%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + ++ T + L+ + + + H A + +RG+I +++ + ++ Sbjct: 36 IFFRLLTFSYLFVLLFWGLGWLD-TEVAGGTGKHTALVDLRGEIAPDGLNNAENINNGLK 94 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D + +I+ ++SPGGS +I I++++ R P + V ++ AS GY ++ Sbjct: 95 KAFEDRNTAGVILRINSPGGSPVQAGSINDEIRRLRIRYPDIPLYAVVEDICASGGYYVA 154 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S++GSIGVL L+KLGV + + + K PFS +P Sbjct: 155 VAADKIFVDKASVMGSIGVLMDGFGFTGTLEKLGVERRLLTAGENKGFLDPFSPSDPAQR 214 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + ++ + F+++V + R + G +WTGA++ ++GL D +G + V + Sbjct: 215 EHAKKILAEIHQQFIQVVQDGRGDRLKDNPEVFSGMVWTGAKSVELGLADALGNADYVAR 274 Query: 236 SL 237 + Sbjct: 275 EV 276 >gi|148284225|ref|YP_001248315.1| periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] gi|146739664|emb|CAM79457.1| Periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] Length = 302 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 150/291 (51%), Gaps = 17/291 (5%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVE-----DNSPHVARIAIRGQIEDSQELIERIERISRD 63 K + + L L+T VV F + + V ++A I I I D +L + +I D Sbjct: 20 KWKILTLLLITAIVVLFIFRNRVGYSPSLATGDYIANIQIDDLIYDDIKLNNLLHQIKND 79 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D A ALI+ + SPGG+ E I+ ++ + N KPV+ + +AAS GYL++ A++ I+A Sbjct: 80 DKAKALILHIDSPGGTVAGSEKIYGILRSISNSKPVVAVLGTVAASGGYLVALAADYIIA 139 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ++++ GSIG++ P + F +K+G+ + KS +KA PS +V P + +++ Sbjct: 140 QKSTVTGSIGIVHFSPEITEFGEKIGIKFHTFKSGELKAAPSLTEKVTPAVHEATMTLIN 199 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL---YAL 240 Y +FV LV+E R + ++ L ++DG+ +TG +A + LID +G E+ L L Sbjct: 200 DMYDFFVELVAERRQMSPEQVLKVADGKAYTGRQALSLNLIDALGTTEDALSWLQQEKKL 259 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 +D + ++ N Y I L + L +K+ G+ A++ Sbjct: 260 SLDLRVIELHTQNKLAGY---------IKLLQNNMHKLFFGSKINGVMALY 301 >gi|22126048|ref|NP_669471.1| protease 4 [Yersinia pestis KIM 10] gi|108807515|ref|YP_651431.1| protease 4 [Yersinia pestis Antiqua] gi|108811791|ref|YP_647558.1| protease 4 [Yersinia pestis Nepal516] gi|149365915|ref|ZP_01887950.1| protease IV [Yersinia pestis CA88-4125] gi|165927734|ref|ZP_02223566.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. F1991016] gi|165939383|ref|ZP_02227931.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. IP275] gi|166009364|ref|ZP_02230262.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. E1979001] gi|166210495|ref|ZP_02236530.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. B42003004] gi|167401415|ref|ZP_02306912.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419969|ref|ZP_02311722.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426564|ref|ZP_02318317.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929262|ref|YP_002347137.1| protease 4 [Yersinia pestis CO92] gi|229897580|ref|ZP_04512736.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898225|ref|ZP_04513373.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. India 195] gi|229902086|ref|ZP_04517207.1| protease IV (signal peptide peptidase) [Yersinia pestis Nepal516] gi|270490735|ref|ZP_06207809.1| signal peptide peptidase SppA, 67K type [Yersinia pestis KIM D27] gi|294503792|ref|YP_003567854.1| protease IV [Yersinia pestis Z176003] gi|21959000|gb|AAM85722.1|AE013819_8 protease IV, a signal peptide peptidase [Yersinia pestis KIM 10] gi|108775439|gb|ABG17958.1| protease IV [Yersinia pestis Nepal516] gi|108779428|gb|ABG13486.1| protease IV [Yersinia pestis Antiqua] gi|115347873|emb|CAL20793.1| protease IV [Yersinia pestis CO92] gi|149292328|gb|EDM42402.1| protease IV [Yersinia pestis CA88-4125] gi|165912724|gb|EDR31353.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. IP275] gi|165920348|gb|EDR37625.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. F1991016] gi|165991919|gb|EDR44220.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. E1979001] gi|166207675|gb|EDR52155.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. B42003004] gi|166961664|gb|EDR57685.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049111|gb|EDR60519.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054440|gb|EDR64252.1| signal peptide peptidase SppA, 67K type [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680982|gb|EEO77077.1| protease IV (signal peptide peptidase) [Yersinia pestis Nepal516] gi|229688791|gb|EEO80859.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. India 195] gi|229693917|gb|EEO83966.1| protease IV (signal peptide peptidase) [Yersinia pestis biovar Orientalis str. PEXU2] gi|262365774|gb|ACY62331.1| protease IV [Yersinia pestis D182038] gi|270339239|gb|EFA50016.1| signal peptide peptidase SppA, 67K type [Yersinia pestis KIM D27] gi|294354251|gb|ADE64592.1| protease IV [Yersinia pestis Z176003] Length = 616 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 309 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQPPGNVGGDTLAAQIRQARLDPKIKAVIL 368 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 369 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 428 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 429 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 487 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 488 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 541 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 542 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 579 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 56/284 (19%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + S + + + G I D ++ Sbjct: 39 VGIYFQFQSKPVEPVKGALLVNLSGVIVDQPAINNKLRQWGRELLGASSNRLQENSLFDI 98 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMA 107 +E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 99 VETIRLAKDDDNINGLVLSLS----DLTGADQSSLQYIGKALREFRDTGKKIYAVGDSYN 154 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ +N I + V G Y K L+ L V+ + K+ P Sbjct: 155 QT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYKSAVEPM 213 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-------- 217 ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 214 IRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVAGGSQAK 272 Query: 218 -AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 273 YALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 316 >gi|88859293|ref|ZP_01133933.1| protease IV, a signal peptide peptidase [Pseudoalteromonas tunicata D2] gi|88818310|gb|EAR28125.1| protease IV, a signal peptide peptidase [Pseudoalteromonas tunicata D2] Length = 624 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 14/252 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + VA + +G I D + + DD A+++ + S GGS +A E Sbjct: 324 TEKVAVVVAKGNIVDGKRKAGEIGGDSTSALLRKARLDDKVKAVVLRIDSGGGSMFASEL 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + +K KPVI + +AAS GY I+ A+N I AA +++ GSIG+ + Sbjct: 384 IRAEVLALKAAGKPVIASMSSVAASGGYWIASAANEIWAAPSTITGSIGIFGTVMTFENS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +LGV V ++ M SP E+NP+ M+Q ++ Y+ F+ +V+E+R + ++ Sbjct: 444 LARLGVYSDGVSTTEMAGF-SPMRELNPQLGNMIQMSIERGYNRFLTIVAEARGMSIEEV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI---KDWNPPKNYWFC 261 ++ GR+W +AK++GL+D +G +++ ++ L I + +P + + Sbjct: 503 DHIAQGRVWIATQAKELGLVDHLGNKQDAIEAAAKLASLDHYDVITVEQTLSPRELFMKE 562 Query: 262 DLKNLSISSLLE 273 L N + SL+ Sbjct: 563 FLSNAHVQSLIA 574 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 97/279 (34%), Gaps = 41/279 (14%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F + I ++ ++++ V + S V + + GQI + ++ ++ +E Sbjct: 15 LNFSRRLIFNILFVVIIISVIVGFSSDDGKVIITPGSALVLNLSGQIVEQEKYVDPLEAA 74 Query: 61 SRD-----DSATALIVS-----LS----SPGGSAYAG-------------EAIFRAIQKV 93 D D +++ ++ +P S + I A+ + Sbjct: 75 IGDSMGQNDEPPEVLLDDVINVINDAAHNPKISVMVLALQQMQNAHLNKLQEIGAALTEF 134 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K + I + A Y ++ ++ I VG G Y K L+KL +S Sbjct: 135 KAQGKKIIATGDSYTQAQYYLAAYADEISMHPYGWVGVEGYAMYPVYFKDALEKLSISQH 194 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDK-------- 203 + K+ PF + + ++ + + + + V+ RN Sbjct: 195 IFRVGTFKSAVEPFIRNDMSDAAKLANKEWLGALWLQYKTDVAAQRNFDISNFDESMTTF 254 Query: 204 TLVLS--DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + G +G A K G +D + +EEV Q L L Sbjct: 255 LEKFAAQSGD--SGEYALKNGWVDNLKTKEEVRQDLIKL 291 >gi|170024325|ref|YP_001720830.1| protease 4 [Yersinia pseudotuberculosis YPIII] gi|169750859|gb|ACA68377.1| signal peptide peptidase SppA, 67K type [Yersinia pseudotuberculosis YPIII] Length = 616 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 309 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQTPGNVGGDTLAAQIRQARLDPKIKAVIL 368 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 369 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 428 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 429 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 487 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 488 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 541 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 542 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 579 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 56/284 (19%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + S + + + G I D ++ Sbjct: 39 VGIYFQFQSKPVEPVKGALLVNLSGVIVDQPAINNKLRQWGRELLGASSNRLQENSLFDI 98 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMA 107 +E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 99 VETIRLAKDDDNINGLVLSLS----DLTGADQPSLQYIGKALREFRDTGKKIYAVGDSYN 154 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ +N I + V G Y K L+ L V+ + K+ P Sbjct: 155 QT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYKSAVEPM 213 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-------- 217 ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 214 IRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVAGGSQAK 272 Query: 218 -AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 273 YALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 316 >gi|332090582|gb|EGI95679.1| signal peptide peptidase SppA, 67K type [Shigella boydii 5216-82] Length = 618 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ A + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAK-AAKLAKVKQWHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 315 >gi|323498312|ref|ZP_08103314.1| protease IV [Vibrio sinaloensis DSM 21326] gi|323316740|gb|EGA69749.1| protease IV [Vibrio sinaloensis DSM 21326] Length = 616 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 13/269 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 + ++ + VA + G I D + + + DD A+++ + SP Sbjct: 315 TMAARFNTAADDVAIVVASGAIMDGNQPRGTVGGDTVAALLRQARNDDKVKAVVLRVDSP 374 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA+A E I I +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ Sbjct: 375 GGSAFASEVIRNEILALKEAGKPVVASMSSVAASGGYWISTSADRIVAQPTTLTGSIGIF 434 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L++LGV V ++P + + A + Q ++ Y F LVS Sbjct: 435 SVITTFEKGLNELGVYTDGVGTTPFSGVG-VTTGLTEGAAEAFQLGIEHGYKRFTDLVSS 493 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--VDQSIRKIKDWN 253 SR IP + ++ GR+WTG +A +GL+D +G ++ + L D ++ +++ Sbjct: 494 SREIPAAQMDNIAQGRVWTGQDALNLGLVDNIGDFDDAVKLAAELAELTDYNLYWVEEPL 553 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 P + ++ N SL D + Sbjct: 554 SPAQQFIQNIMNQVKISLGVDVSAYLPAA 582 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 98/275 (35%), Gaps = 43/275 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS----------- 50 FV + + + S+ + VYF S A I + G I + Sbjct: 21 FVRLALTNLFFLASIAIIYFVYFHAESEAPSVPTKSALILNLSGPIVEQPNYINPMDSFT 80 Query: 51 --------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 ++++ + D++ + L+++L P + I +A+ + K Sbjct: 81 GSLLGQDLPRENVLYDIVDTLRYAKDDENVSGLVLALGDLPETNLTKLRYIAKALNEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ + A V G Y K L+KL V+ Sbjct: 141 SGKPVYAVGDFYNQS-QYYLASYADKVYLAPDGAVMLKGYSAYSLYYKTLLEKLNVNTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-----LVL 207 + K+ PF +++ +A + + + F ++ +R I D L Sbjct: 200 FRVGTYKSAIEPFVRDDMSAEAKESASRWLGQLWGAFTDDIAANRQISTDTLNLSMEQFL 259 Query: 208 S-----DGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +G A + +GL+D + +++V + Sbjct: 260 ALLKENNGD--LAALSLNIGLVDQLATRQQVRTEM 292 >gi|254428559|ref|ZP_05042266.1| peptidase, S49 (protease IV) family [Alcanivorax sp. DG881] gi|196194728|gb|EDX89687.1| peptidase, S49 (protease IV) family [Alcanivorax sp. DG881] Length = 324 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 17/276 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIE 58 + K T ++ L + + V+ S V HV + + G I Q+ ++ + Sbjct: 38 IFFKALT-FIYLFTLLVMVIPGKTGSAVTMAEEHVGIVDVNGVIAPDQDASADLIVTGLT 96 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 R ++ TA+++ ++SPGGS ++ AI++++ K V + ++ AS Y I+ Sbjct: 97 RAFEAENTTAVLLKINSPGGSPVQSNQVYNAIKRLRAEYPDKKVYAAITDVGASGAYFIA 156 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A S+VGSIGV+ ++ DKLGV + + + K PFS + P Sbjct: 157 SAADEIYADPASIVGSIGVIMAGFGLEQAADKLGVERRVLTAGENKDLMDPFSPIQPAHR 216 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + +Q ++D + F+ V E R + D L G WTG A +GLID + +V Sbjct: 217 KHVQTMLDDIHQQFITAVKEGRGDRLKVDSHPELFSGLFWTGERALDLGLIDGLMSPGQV 276 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + ++ +++ ++ ++ +S Sbjct: 277 IREVAG------QEEMLNYSSSRSPMEEFIRRFGVS 306 >gi|294341005|emb|CAZ89400.1| putative Peptidase S49 [Thiomonas sp. 3As] Length = 327 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 9/238 (3%) Query: 8 IKTRYVMLSLVTLTVV--YFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 I R+V+L +V L + PH A I + G+I + + ++ Sbjct: 46 IFFRFVLLGIVALIFFGGMITEFGSRTATGPHTALIELNGEISIGSQASADNINAALQDA 105 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCAS 118 +I+ ++SPGGS IF I++++ + KPV E+ AS Y ++ A+ Sbjct: 106 FSSPDTRGVILRINSPGGSPVQASQIFAEIERLRAKYNKPVYAVCEEVCASGAYYVAAAA 165 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I SLVGSIGVL +DKLGV+ + + + K PF+ + Sbjct: 166 NDIYVNPASLVGSIGVLMDGFGFSGLMDKLGVTRRLLTAGANKGFMDPFTPMPENQKTYA 225 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +++ + F+ V + R + G +WTG A K GL D G +++ + Sbjct: 226 LGMLEQIHKQFIAAVEKGRGVRLKVNDETFSGLVWTGESAVKQGLADGYGDVDQIARD 283 >gi|45441763|ref|NP_993302.1| protease 4 [Yersinia pestis biovar Microtus str. 91001] gi|162421479|ref|YP_001606775.1| protease 4 [Yersinia pestis Angola] gi|229894836|ref|ZP_04510016.1| protease IV (signal peptide peptidase) [Yersinia pestis Pestoides A] gi|45436625|gb|AAS62179.1| protease IV [Yersinia pestis biovar Microtus str. 91001] gi|162354294|gb|ABX88242.1| signal peptide peptidase SppA, 67K type [Yersinia pestis Angola] gi|229702309|gb|EEO90328.1| protease IV (signal peptide peptidase) [Yersinia pestis Pestoides A] Length = 616 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 309 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQPPGNVGGDTLAAQIRQARLDPKIKAVIL 368 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 369 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 428 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 429 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 487 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 488 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 541 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 542 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 579 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 56/284 (19%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + S + + + G I D ++ Sbjct: 39 VGIYFQFQSKPVEPVKGALLVNLSGVIVDQPAINNKLRQWGRELLGASSNRLQENSLFDI 98 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMA 107 +E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 99 VETIRLAKDDDNINGLVLSLS----DLTGADQSSLQYIGKALREFRDTGKKIYAVGDSYN 154 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ +N I + V G Y K L+ L V+ + K+ P Sbjct: 155 QT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYKSAVEPM 213 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-------- 217 ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 214 IRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVAGGSQAK 272 Query: 218 -AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 273 YALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 316 >gi|45602163|gb|AAS71641.1| PfaP [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 242 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 121/217 (55%), Gaps = 1/217 (0%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 ++++ I ++ + +++ ++SPGG+ A + ++ + +++ + ++ + +MAAS GY Sbjct: 1 MQKLRDIEQNPNIKGILIEINSPGGTVGASQEVYNELMRLRKTRKIVVSMKDMAASGGYY 60 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I A ++ GSIGV+ P +K LD+ GV +++ K K S F + P+ Sbjct: 61 IASAADKIFALSGTITGSIGVIAMAPNIKGLLDRYGVKMRTYKEGKYKDSLSLFRDSTPE 120 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +M+Q ++ +Y+ F++ V++ RN L++G+I++G +A + L+D +GG++E Sbjct: 121 EDEMIQKMLSDTYNEFIQDVAKGRNQTVKSVQNLAEGKIYSGQDAFRNKLVDEIGGRKEA 180 Query: 234 WQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + L L D I ++ P + F L + S Sbjct: 181 LEELSRLCQYDGEIPLYEEDESPFDRLFMMLGSKMNS 217 >gi|289749231|ref|ZP_06508609.1| protease IV sppA [Mycobacterium tuberculosis T92] gi|289689818|gb|EFD57247.1| protease IV sppA [Mycobacterium tuberculosis T92] Length = 567 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 272 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 331 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 332 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 391 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 392 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 451 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 452 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 511 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 512 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 547 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 21 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 77 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 78 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 137 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 138 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 197 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 198 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 249 >gi|51596414|ref|YP_070605.1| protease 4 [Yersinia pseudotuberculosis IP 32953] gi|145598269|ref|YP_001162345.1| protease 4 [Yersinia pestis Pestoides F] gi|186895459|ref|YP_001872571.1| protease 4 [Yersinia pseudotuberculosis PB1/+] gi|51589696|emb|CAH21326.1| protease IV [Yersinia pseudotuberculosis IP 32953] gi|145209965|gb|ABP39372.1| protease IV [Yersinia pestis Pestoides F] gi|186698485|gb|ACC89114.1| signal peptide peptidase SppA, 67K type [Yersinia pseudotuberculosis PB1/+] Length = 616 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 309 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQTPGNVGGDTLAAQIRQARLDPKIKAVIL 368 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 369 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 428 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 429 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 487 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 488 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 541 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 542 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 579 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 56/284 (19%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + S + + + G I D ++ Sbjct: 39 VGIYFQFQSKPVEPVKGALLVNLSGVIVDQPAINNKLRQWGRELLGASSNRLQENSLFDI 98 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMA 107 +E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 99 VETIRLAKDDDNINGLVLSLS----DLTGADQSSLQYIGKALREFRDTGKKIYAVGDSYN 154 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ +N I + V G Y K L+ L V+ + K+ P Sbjct: 155 QT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYKSAVEPM 213 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-------- 217 ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 214 IRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVAGGSQAK 272 Query: 218 -AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 273 YALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 316 >gi|329900911|ref|ZP_08272643.1| Peptidase S49 [Oxalobacteraceae bacterium IMCC9480] gi|327549323|gb|EGF33895.1| Peptidase S49 [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 17/289 (5%) Query: 8 IKTRYVMLSLVTLTVVYF--SWSSHVEDNSPHVARIAIRGQI------EDSQELIERIER 59 I R L+ V + F + E + H A I I G I ++ +I + + Sbjct: 29 IFFRLATLAAVVFGIWAFVSFGKTDTEVLTTHTALIDIDGTIESGGGSGSAESVIPALNK 88 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLISC 116 D +A +I+ ++SPGGS I I ++ +KP+ V EM AS GY I+ Sbjct: 89 AYADTAAVGIILRINSPGGSPVQAGMINDEIGRLHKLYPKKPLYVVVDEMCASGGYYIAV 148 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DK+GV + + K PFS + K Sbjct: 149 AADKIFVNKASIVGSIGVLMDGFGFTGLMDKVGVERRLQTAGVNKGFMDPFSPQSEKQKA 208 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q+++D + F+ +V + R +T G WTG +A ++GL D G + V + Sbjct: 209 YAQEMLDEIHQQFIDVVRKGRGKRLKETPETFSGLFWTGTKAVEMGLADGFGTIDSVARD 268 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + + D+ + LK + ++ +Q Sbjct: 269 ------EFKAEDVVDYTQHEGLPERVLKKFGAAMGAGAMKSIVSGAGLQ 311 >gi|86608144|ref|YP_476906.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556686|gb|ABD01643.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. JA-2-3B'a(2-13)] Length = 384 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 31/289 (10%) Query: 30 HVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + + + G I +E++ +RD S A+++ ++SPGG+ Sbjct: 81 EAARGAERIEVVTLEGTIGGPGGSTLVGLPTSPVEQLREAARDPSVKAVLLRINSPGGAV 140 Query: 81 YAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + ++RA+ + + KPVI + +AAS GY ++ A++ I A +L GSIG + Sbjct: 141 GSSQELYRAVTALHEADKPVIAILENIAASGGYYVASAADKIYANPGTLTGSIGAIISGL 200 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-- 197 L+ G+ ++ K+ K SPF P+ +++Q++V+ + F+R V++ R Sbjct: 201 SFGKLLENYGIEPQTFKTGEYKDLLSPFRSATPQEQRLLQNLVEDTLEQFIRDVAQGRQH 260 Query: 198 ------------------NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ D+ L+DGRI+TGA+A +VGL+D +GG E + L Sbjct: 261 LPEKADEVLEAEMIARRQSLDEDRVRQLADGRIFTGAQAVEVGLVDALGGYTEAVEDLRR 320 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDL-KNLSISSLLEDTIPLMKQTKVQGL 287 + D S+ + + L + LS L++ + G+ Sbjct: 321 MTGDPSLSPAGEGEGFQRVLRRLLSQGLSSQRQAAWLGRLLESNEAVGI 369 >gi|254459026|ref|ZP_05072449.1| signal peptide peptidase SppA, 36K type [Campylobacterales bacterium GD 1] gi|207084297|gb|EDZ61586.1| signal peptide peptidase SppA, 36K type [Campylobacterales bacterium GD 1] Length = 289 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 135/267 (50%), Gaps = 7/267 (2%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 I+ + + V + V+ F+ S + ++ +I + G I + E++E+IE+ +++ Sbjct: 17 FIQNHFKAMVFVLILVLIFAPESEQDLTQNNLQQINLVGPIIEVSEILEQIEKAGANNNV 76 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ + SPGG+ I AI++++ +KPVI AS Y S +N I+A Sbjct: 77 KGVLLVVDSPGGAVAPSIEIAYAIKRLRTKKPVIAYAKGTIASGSYYASIWANEIIANPG 136 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+VGSIGV+ Q + +DK+G+S +SVK+ K +P + P + + V+ +Y Sbjct: 137 SMVGSIGVIMQGADMSELMDKIGISTQSVKAGKYKQVGTPDRKWEPYEINELNKVIQGTY 196 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQS 245 F + V+++R + K ++ I+T +AK VGL+D +G L L GVD Sbjct: 197 DMFTQDVAKARGLDIKKRDQFANAHIFTAQQAKDVGLVDSLGVSHNAKMKLILLSGVDDP 256 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLL 272 I ++ + +K L+ S+ L Sbjct: 257 IWN------KEDKFDKIMKKLTASTAL 277 >gi|85713271|ref|ZP_01044295.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] gi|85692915|gb|EAQ30889.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] Length = 562 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 13/257 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSP 76 + E +A + RGQI + + + D+ A+++ + SP Sbjct: 262 DLNPLAESKKDQIAVVVARGQIVNGTQRAGMIGGDSTAALLRKAGEDERTKAVVLRIDSP 321 Query: 77 GGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS +A E I + I ++K + PVI + +AAS GY I+ ++ I AA T++ GSIGV Sbjct: 322 GGSGFASEIIRQEILQLKEKGIPVIASMSSVAASGGYWIAAEADEIWAAPTTITGSIGVF 381 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++ +GV SV ++ + + ++ +++Q ++ Y +F+ +V+E Sbjct: 382 GLVMTLEDSAAAIGVHSDSVSTTEI-ESLNTLEGISDSQARILQRSTENFYQFFITMVAE 440 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--VDQSIRKIKDWN 253 +RN+ + ++ GRIWTG +A + GL+D +G ++ Q+ D ++ I Sbjct: 441 ARNMTPEAVDDVAQGRIWTGRQALERGLVDNLGDFDDAIQAAAKRADLNDYTVNTITQDL 500 Query: 254 PPKNYWFCDLKNLSISS 270 P+ +F +L + S Sbjct: 501 SPQQQFFANLMGQTSLS 517 Score = 80.6 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 86/219 (39%), Gaps = 24/219 (10%) Query: 52 ELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++I+ IE+ DD AL + LS+ P G +A+ A+ K K I + Sbjct: 38 DVIDAIEKAKTDDRIGALYLDLSALYPSG-VNKLQAVGEALSDFKTSKKPIIAAGDYFEQ 96 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ ++ + +GS+ G + Y K LDKL V K KA P Sbjct: 97 YQYYLASYADKVYLNP---LGSVAFDGFDYSQVYFKELLDKLKVKPHVFKVGTYKAAVEP 153 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----------KTLVLSDGRIWT 214 F + ++ +A + + + D+ + F V+ R + ++G + Sbjct: 154 FIRNSMSDEAREANEYLYDAMWENFKADVTAQRQLSDTITSGQLDDYMAAFESANGDM-- 211 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDW 252 A L+D + + E+ L L G D+ + ++ Sbjct: 212 AQMALDTNLVDALKTRTEIRNELINLSGYDEDAKTFRNI 250 >gi|296136836|ref|YP_003644078.1| peptidase S49 [Thiomonas intermedia K12] gi|295796958|gb|ADG31748.1| peptidase S49 [Thiomonas intermedia K12] Length = 327 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 9/238 (3%) Query: 8 IKTRYVMLSLVTLTVV--YFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERI 60 I R+V+L +V L + PH A I + G+I + + ++ Sbjct: 46 IFFRFVLLGIVALIFFGGMIAEFGSSTATGPHTALIELNGEISIGSQASADNINAALQDA 105 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCAS 118 +I+ ++SPGGS IF I++++ + KPV E+ AS Y ++ A+ Sbjct: 106 FSSPDTRGVILRINSPGGSPVQASQIFAEIERLRAKYNKPVYAVCEEVCASGAYYVAAAA 165 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I SLVGSIGVL +DKLGV+ + + + K PF+ + Sbjct: 166 NDIYVNPASLVGSIGVLMDGFGFSGLMDKLGVTRRLLTAGANKGFMDPFTPMPEDQKTYA 225 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +++ + F+ V + R G +WTG A K GL D G +++ + Sbjct: 226 LGMLEQIHKQFIAAVEKGRGARLKVNDETFSGLVWTGESAVKQGLADGYGDVDQIARD 283 >gi|148656516|ref|YP_001276721.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] gi|148568626|gb|ABQ90771.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] Length = 342 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 14/246 (5%) Query: 34 NSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + I + G I ++L+ +I + D A+++ + SPGGS A Sbjct: 70 GTDRIVVITVSGAIGADVDGLFSTGLSHEQLLSQIRTAANDSRVKAVVLRVDSPGGSVVA 129 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 ++ ++K+++R K ++ + +AAS GY IS A I A +L GS+GV+ Sbjct: 130 SNELYVELKKLRDRGKHLVISMGTVAASGGYYISMAGERIYANPDTLTGSLGVIVSLLNY 189 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 ++LG+ KS +K SP + + +V+ +Y FV ++ E R + Sbjct: 190 DEAFERLGLREYVYKSGDLKDIGSPLRPPTSEEEAVWNALVNEAYQGFVDVIVEGRGMER 249 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYW 259 + + L+DGRI+TG +AK +GLID +G E+ + L D + + + +N ++ Sbjct: 250 TEVIRLADGRIYTGRQAKALGLIDELGNLEDAIEGAKNLAGLSDALVVRYRAFNTLRDLL 309 Query: 260 FCDLKN 265 +L+ Sbjct: 310 QANLER 315 >gi|15831726|ref|NP_310499.1| protease 4 [Escherichia coli O157:H7 str. Sakai] gi|168749412|ref|ZP_02774434.1| protease 4 [Escherichia coli O157:H7 str. EC4113] gi|168762162|ref|ZP_02787169.1| protease 4 [Escherichia coli O157:H7 str. EC4501] gi|195937452|ref|ZP_03082834.1| protease 4 [Escherichia coli O157:H7 str. EC4024] gi|208810557|ref|ZP_03252433.1| protease 4 [Escherichia coli O157:H7 str. EC4206] gi|209400845|ref|YP_002270837.1| protease 4 [Escherichia coli O157:H7 str. EC4115] gi|254793384|ref|YP_003078221.1| protease 4 [Escherichia coli O157:H7 str. TW14359] gi|261227739|ref|ZP_05942020.1| protease 4 [Escherichia coli O157:H7 str. FRIK2000] gi|261258095|ref|ZP_05950628.1| protease 4 [Escherichia coli O157:H7 str. FRIK966] gi|13361939|dbj|BAB35895.1| protease IV [Escherichia coli O157:H7 str. Sakai] gi|188016236|gb|EDU54358.1| protease 4 [Escherichia coli O157:H7 str. EC4113] gi|189367493|gb|EDU85909.1| protease 4 [Escherichia coli O157:H7 str. EC4501] gi|208725073|gb|EDZ74780.1| protease 4 [Escherichia coli O157:H7 str. EC4206] gi|209162245|gb|ACI39678.1| protease 4 [Escherichia coli O157:H7 str. EC4115] gi|209768380|gb|ACI82502.1| protease IV [Escherichia coli] gi|209768382|gb|ACI82503.1| protease IV [Escherichia coli] gi|209768386|gb|ACI82505.1| protease IV [Escherichia coli] gi|254592784|gb|ACT72145.1| protease IV (signal peptide peptidase) [Escherichia coli O157:H7 str. TW14359] gi|320188454|gb|EFW63116.1| Protease IV [Escherichia coli O157:H7 str. EC1212] gi|326342134|gb|EGD65915.1| Protease IV [Escherichia coli O157:H7 str. 1044] Length = 618 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ A + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAK-AAELAKAKQWHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKADKNYRAISYYD 315 >gi|187776034|ref|ZP_02992803.1| protease 4 [Escherichia coli O157:H7 str. EC4196] gi|189010434|ref|ZP_03006318.1| protease 4 [Escherichia coli O157:H7 str. EC4076] gi|189402336|ref|ZP_03006680.1| protease 4 [Escherichia coli O157:H7 str. EC4401] gi|189403499|ref|ZP_03007105.1| protease 4 [Escherichia coli O157:H7 str. EC4486] gi|189405098|ref|ZP_03007686.1| protease 4 [Escherichia coli O157:H7 str. EC869] gi|189406058|ref|ZP_03008051.1| protease 4 [Escherichia coli O157:H7 str. EC508] gi|208816614|ref|ZP_03257734.1| protease 4 [Escherichia coli O157:H7 str. EC4045] gi|208818606|ref|ZP_03258926.1| protease 4 [Escherichia coli O157:H7 str. EC4042] gi|217328805|ref|ZP_03444886.1| protease 4 [Escherichia coli O157:H7 str. TW14588] gi|187769467|gb|EDU33311.1| protease 4 [Escherichia coli O157:H7 str. EC4196] gi|189000232|gb|EDU69218.1| protease 4 [Escherichia coli O157:H7 str. EC4076] gi|189356179|gb|EDU74598.1| protease 4 [Escherichia coli O157:H7 str. EC4401] gi|189360401|gb|EDU78820.1| protease 4 [Escherichia coli O157:H7 str. EC4486] gi|189372021|gb|EDU90437.1| protease 4 [Escherichia coli O157:H7 str. EC869] gi|189376761|gb|EDU95177.1| protease 4 [Escherichia coli O157:H7 str. EC508] gi|208730957|gb|EDZ79646.1| protease 4 [Escherichia coli O157:H7 str. EC4045] gi|208738729|gb|EDZ86411.1| protease 4 [Escherichia coli O157:H7 str. EC4042] gi|217318152|gb|EEC26579.1| protease 4 [Escherichia coli O157:H7 str. TW14588] gi|326343685|gb|EGD67447.1| Protease IV [Escherichia coli O157:H7 str. 1125] Length = 622 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 314 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 373 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 374 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 433 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 434 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 492 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ A + Sbjct: 493 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAK-AAELAKAKQWHL 551 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 552 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 588 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 31 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 90 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 91 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 150 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 151 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 209 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 210 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 269 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 270 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKADKNYRAISYYD 319 >gi|56460437|ref|YP_155718.1| periplasmic serine protease [Idiomarina loihiensis L2TR] gi|56179447|gb|AAV82169.1| Periplasmic serine protease, ClpP family [Idiomarina loihiensis L2TR] Length = 616 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 13/252 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGG 78 S + +A + RGQI + + I + A+++ + SPGG Sbjct: 315 ESLQPTDRSQIAVVVARGQIVNGSQKAGMIGGDSTAKLIREARNNKQTKAIVLRIDSPGG 374 Query: 79 SAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 SA+A E I + I + K PV+ + +AAS GY I+ ++ IVAA T++ GSIGV Sbjct: 375 SAFASEIIRQEILQAKEAGIPVVASMSTVAASGGYWIAADADKIVAAPTTITGSIGVFGL 434 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 ++ L +GV +V ++ ++ +P E+ +++Q V+++Y F+ +VS++R Sbjct: 435 LMTLEDSLAAIGVHSDTVSTTEIQG-LNPLEEMTEYQKKLVQSSVEATYEDFLTIVSKAR 493 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPP 255 N+ D ++ GRIWTG +A + GL+D +G ++ + L D ++ ++ Sbjct: 494 NMSRDDVHEVAQGRIWTGKQAMERGLVDQLGDFDDSVAAAAELAAIDDYDVKIVQQELSS 553 Query: 256 KNYWFCDLKNLS 267 K +F ++ N S Sbjct: 554 KEQFFANMFNSS 565 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 99/307 (32%), Gaps = 59/307 (19%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-------------- 51 K I L L V FS +E + + G + + + Sbjct: 17 KVILNLVFFLILAVFLVSLFSGEDPIEVPENGILVLNPNGMLVEEKTWVDPFSQFLNEAM 76 Query: 52 ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVK 94 ++++ IE+ D+ AL ++L + Y + A+ + Sbjct: 77 GSSDDIPEVLLSDVVDSIEKAKTDERIGALYLNLQ----NLYPSGLNKLQAVAEALDDFR 132 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-----VKPFLDKLG 149 I + Y ++ ++ + GV+F+ K LDKL Sbjct: 133 TSGKPIISNADYYDQHQYYLAAHADQLYLNPMG-----GVVFEGLDYTQLYFKDLLDKLK 187 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI----PYDK 203 V + K KA PF ++++ +A + + + + + F V+ +RNI K Sbjct: 188 VQPQVFKVGKFKAAVEPFIRNDMSDEAREANEFLYSALWDSFRTDVTAARNINPLVTSGK 247 Query: 204 TLVL------SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++G + A + ++D + + EV L L N Sbjct: 248 VDDYMSAFNSANGDM--AKMALETNMVDALRTRTEVRNELINLAGYDKEEDTFRHITYDN 305 Query: 258 YWFCDLK 264 Y +++ Sbjct: 306 YLATEME 312 >gi|123966585|ref|YP_001011666.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9515] gi|123200951|gb|ABM72559.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9515] Length = 269 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 7/265 (2%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +I+ +++I D ALI+ + SPGG+ + I+ AI Sbjct: 8 KSKKRMARIVIDEPITSSTRVSVIKALKQI-EDREFPALILRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++++ + V+ ++AS G I ASN IVA ++ GSIGV+ + + L+K+G Sbjct: 67 KRLREKGCKVVASFGNISASGGVYIGVASNKIVANPGTITGSIGVIIRGNNLSELLNKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + +++Q ++D SY F V+E R++P + +D Sbjct: 127 IKFETVKSGIYKDILSPDKPLSDEGREILQGLIDESYKQFTEAVAEGRDLPVEDVKKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GRI+TG +AKK+GL+D +G + + + +D I+ + K + I Sbjct: 187 GRIFTGTQAKKLGLVDEIGDEFTARELAAEMVKIDPKIQPVTFGKKKKKILGLIPGSKII 246 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWNP 293 ++++ + + ++ P Sbjct: 247 EKIIQNI--FFEVNSTNKILWLYKP 269 >gi|217976339|ref|YP_002360486.1| signal peptide peptidase SppA, 36K type [Methylocella silvestris BL2] gi|217501715|gb|ACK49124.1| signal peptide peptidase SppA, 36K type [Methylocella silvestris BL2] Length = 324 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 157/297 (52%), Gaps = 12/297 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 +I + V + + S +PH+AR++I G I ++ ++ I RI D+A Sbjct: 24 RILAFGAAVIGVLAIGLRLASSDDSVSFAPHIARLSISGLITGDRDTLKLISRIEESDAA 83 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A++VS+ SPGG+ E ++ ++++ +KP + V +AAS GY+ + ++ IVA Sbjct: 84 -AVLVSIDSPGGTTAGAERLYDQLRRLSAKKPTVAVVGSLAASGGYIAALGADQIVALGN 142 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 SLVGSIGVL +YP V LD +GV +++VKSSP+KA P+ F +P+A + +VD S+ Sbjct: 143 SLVGSIGVLVEYPNVTKLLDTVGVKVEAVKSSPLKAAPNGFEPTSPEARAALASLVDDSF 202 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 WF LV E RN+ + + DGR++TG + + L+D +GG+ E L Sbjct: 203 VWFKDLVRERRNLTAPQLAAVDDGRVFTGRQGLGLHLVDRLGGEREAIAWLEQERAVPKG 262 Query: 247 RKIKDWNPPKNYWFCDLKNLS-----------ISSLLEDTIPLMKQTKVQGLWAVWN 292 KI+DW ++ L + + +S LL + ++ + GL ++W Sbjct: 263 LKIRDWKQQGSFGRIGLFSFAARAASIFHLDELSRLLGRSSQFVEARMLDGLVSIWQ 319 >gi|289208372|ref|YP_003460438.1| peptidase S49 [Thioalkalivibrio sp. K90mix] gi|288944003|gb|ADC71702.1| peptidase S49 [Thioalkalivibrio sp. K90mix] Length = 321 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 17/278 (6%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDN---SPHVARIAIRGQIEDS-----QELIER 56 K + Y+ LV + ++ ED+ HVA + + G I S +EL + Sbjct: 37 FKLLLFIYLFALLVLVRGGDMGLTAWFEDDREPEEHVAVVEVDGLIASSARANAEELNKT 96 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYL 113 ++R D A+++ ++S GGS AI I ++K+ PV V ++ ASA Y Sbjct: 97 LKRAFEADGTRAVMLRINSGGGSPVQAAAIHDEILRLKDEHEDIPVYAVVTDIGASAAYY 156 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I A++ S+VGSIGV V L+ +GV + S KA PF ++ Sbjct: 157 IAVAADEIYASQASMVGSIGVRLDSFGVVDLLENIGVERRLFTSGENKALLDPFLPLDEG 216 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V + D++D + FV +V + R + L DG IWTG A +GLID +G + V Sbjct: 217 HVSHIHDLMDGLHQQFVDVVRQGRGDRLAENEELFDGLIWTGQRAVDLGLIDGLGTDQSV 276 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + + + K+ + P ++ ++L +S+L Sbjct: 277 ARDVIG------VEKMVTFKPRRSALQLLFEDLGMSAL 308 >gi|226943603|ref|YP_002798676.1| peptidase S49, SppA [Azotobacter vinelandii DJ] gi|226718530|gb|ACO77701.1| Peptidase S49, SppA [Azotobacter vinelandii DJ] Length = 325 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 113/246 (45%), Gaps = 11/246 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ +++L+ + S + H A + +RG I D + ++ + Sbjct: 40 IFFKLLGFAYLVALLAMFSPALSLR-EAARSGEHTALVEVRGMIADDEAASADNVVGSLR 98 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D +++ ++SPGGS I+ I++++ P + + ++ AS Y ++ Sbjct: 99 AAFKDKHTKGVVLRINSPGGSPVQSGYIYDEIRRLRAEHPDTKLYAVITDLGASGAYYVA 158 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV +++LGV + + KA PF V Sbjct: 159 SAADAIYADKASLVGSIGVTAASFGFVGAMERLGVERRVYTAGEHKAFLDPFQSQKEGEV 218 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + Q+V++ ++ F+ V + R + + L G +W+G +A ++GL+D +G V Sbjct: 219 RFWQEVLEVTHRQFIDSVKQGRGERLKDKEHPELFSGLVWSGEQALQLGLVDALGSASHV 278 Query: 234 WQSLYA 239 + + Sbjct: 279 AREVVG 284 >gi|242239399|ref|YP_002987580.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech703] gi|242131456|gb|ACS85758.1| signal peptide peptidase SppA, 67K type [Dickeya dadantii Ech703] Length = 617 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 11/221 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +S +A I G I D ++I D A+++ ++SPGGS A E Sbjct: 323 DSNEIAVIFANGTIVDGPETPGFVGGDTTADQIREARLDPKIKAVVLRVNSPGGSVSASE 382 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + V+ KPV+ + MAAS GY IS ++ I+A+ ++L GSIG+ + Sbjct: 383 LIRAELAAVRQAGKPVVVSMGGMAASGGYWISTPASAIIASPSTLTGSIGIFGVLTTFEN 442 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD +GV V +SP+ + + + Q+MQ ++ Y FV LV++SR + Sbjct: 443 SLDSVGVHTDGVATSPLAD-LAETKGLPSETAQLMQINIERGYKTFVSLVAQSRKKTPED 501 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 ++ G +W G++AK GL+D +G ++ + L + Sbjct: 502 VDAIAQGHVWIGSDAKANGLVDQLGDFDDAVKKAADLAGLE 542 Score = 82.1 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 19/221 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D++ T +++ LS G+ + I +A+++ ++ KP+ + + Sbjct: 98 DIVDTIRQAKDDNNITGMVMDLSDFSGADQPSLQYIGKALREFRDAGKPIFA-IGDNFTQ 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ +N I V G Y K LDKL VS + K+ PF Sbjct: 157 AQYYLASFANKIYLTPQGNVDLHGFATNNLYYKTLLDKLKVSTHIFRVGTYKSAVEPFIR 216 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A + V + ++ V+ +R I + +DG + T A Sbjct: 217 DDMSPAAREADSRWVSLLWQNYLNTVAANRQITAQQLFPGADGLLKNLRAVEGDTARYAL 276 Query: 220 KVGLIDVVGGQEEVWQSL-YALGVDQSIRK-----IKDWNP 254 + L+D V + + QSL A G D + I D+ P Sbjct: 277 ENKLVDEVATRPAIEQSLVKAFGWDAKNKNFNATSIYDYKP 317 >gi|83815032|ref|YP_446454.1| signal peptide peptidase SppA, 67K type [Salinibacter ruber DSM 13855] gi|83756426|gb|ABC44539.1| signal peptide peptidase SppA, 67K type [Salinibacter ruber DSM 13855] Length = 746 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 107/183 (58%), Gaps = 1/183 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S L E +E D A+++ ++SPGGSA A EA++RA+++ N KPVI + ++AA Sbjct: 479 GSTPLTEALETARTDSRTEAVVLRVNSPGGSAAASEAMWRAVKRTANEKPVIVSMGDVAA 538 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF 167 S GY ++ ++ I+A T+ GSIGV + +KLGV+ V++ P S Sbjct: 539 SGGYYLAAGADSIMADPTTTTGSIGVFGILFNAEGLFEEKLGVTFDGVRTGPYADLYSTT 598 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++P +++ +D +Y+ F+R V+++RN+ + ++ GR+W+G +AK+VGL+D Sbjct: 599 KPLSPDERRLVGGSIDQTYNTFLRRVADARNMDVEAVDEVAQGRVWSGRDAKEVGLVDTT 658 Query: 228 GGQ 230 G Sbjct: 659 GTL 661 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 9/203 (4%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSA--YAGEAIFRAIQKVKNRK-PVIT 101 G D + L + + S D A+ + + G SA E + +A+ + + PV+ Sbjct: 217 GPSVDLRGLQTALRKASSDSRIEAVWLR--TKGVSADWATLEEVRQAVVQARESGLPVLA 274 Query: 102 EVHEMAASAG-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 E + Y ++ A++ + A S G + L +L V + +++ Sbjct: 275 SSDEFGMTEKDYFLASAADSVFTAPQSAFEYNGFGTTVTFFDGALQRLEVEPQLIRAGKY 334 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAE 217 K+ PF S+++ + + +++++ F+ VSE+R + D L+ + + + A Sbjct: 335 KSAGEPFVRSDLSEPNREQLTALLETTNEQFMTAVSEARGLSTDALNRLAEENALLSSAA 394 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A + LID + ++EV L L Sbjct: 395 ALEENLIDGLRYEDEVRDRLRGL 417 >gi|262362087|gb|ACY58808.1| protease IV [Yersinia pestis D106004] Length = 579 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 272 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQPPGNVGGDTLAAQIRQARLDPKIKAVIL 331 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 332 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 391 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 392 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 450 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 451 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 504 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 505 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 542 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 85/226 (37%), Gaps = 29/226 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHE 105 +++E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 60 DIVETIRLAKDDDNINGLVLSLS----DLTGADQSSLQYIGKALREFRDTGKKIYAVGDS 115 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + Y ++ +N I + V G Y K L+ L V+ + K+ Sbjct: 116 YNQT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYKSAVE 174 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE------ 217 P ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 175 PMIRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVAGGSQ 233 Query: 218 ---AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 234 AKYALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 279 >gi|289756812|ref|ZP_06516190.1| protease IV SppA [Mycobacterium tuberculosis T85] gi|289712376|gb|EFD76388.1| protease IV SppA [Mycobacterium tuberculosis T85] Length = 466 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 171 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 230 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 231 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 290 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 291 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 350 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PP 255 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 351 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 410 Query: 256 KNYWFCDLKNLS---ISSLLEDTIPLMKQTKVQGLW 288 + W S ++ L D + + + G+ Sbjct: 411 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 446 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 12/142 (8%) Query: 130 GSIGVLFQYPYVK---PFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDS 184 GS+G++ L K G+ + V K+ + F+E + + ++DS Sbjct: 7 GSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTEDGFTDAHREAVTRMLDS 66 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVD 243 + V++SRNI D L+D +A GLID +G +++ + + L GV+ Sbjct: 67 LQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLIDRIGFRDQAYARMAELVGVE 126 Query: 244 QSIRK------IKDWNPPKNYW 259 + + D PP+ Y Sbjct: 127 KGSPESSGSQTSPDEKPPRMYL 148 >gi|223041851|ref|ZP_03612039.1| protease 4 [Actinobacillus minor 202] gi|223017344|gb|EEF15767.1| protease 4 [Actinobacillus minor 202] Length = 622 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 20/286 (6%) Query: 21 TVVYFSWSSHVEDN-----SPHVARIAIRGQI---------EDSQELIERIERISRDDSA 66 ++ Y +++ + D + +A I I G+I + LI +++R+ +D S Sbjct: 306 SIRYDDYATDLPDRFNRKAANKIAVINIEGEITMGESLEDTAGTDTLIRQLQRVRQDKSV 365 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAE 125 L++ ++SPGGSA A E I + ++ ++ PV++ + MAAS GY I+ S+ IVA Sbjct: 366 QGLVLRINSPGGSALASELIRQEVEAIQQAGIPVVSSMGGMAASGGYWIAATSDAIVADP 425 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +L GSIG+ + LGV + +SP+ AE S ++ + +++Q V+ Sbjct: 426 NTLTGSIGIFGVLFNFEKTAQNLGVREDGISTSPL-AEISGLKPLSSQQSELIQMSVEQG 484 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ LVS R + K ++ G++W G +A+ +GL+D +G ++ L L Sbjct: 485 YREFLDLVSRGRKMDLAKVDQIAQGQVWLGQKAQSLGLVDQLGNFDDTLALLGNLIN--- 541 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 RK+K+ N P+ F L I K + A W Sbjct: 542 -RKLKEQNKPEVETFTPQWFTEQDDSLFGEISRSLNAKAKLNLASW 586 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 5/158 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++ + ++ D T L++ L G Y + + I + K KPVI S Sbjct: 96 DIADALKNAQTDSRITGLVLELDKFEGGDYPSLAYLGKRITEFKTSGKPVIAIGSSYTQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I V G+ ++ Y K DK+ + K+ P Sbjct: 156 -QYYLASFADQIYLNRAGAVELQGLSYRNLYFKSLFDKIEAKPYIFRVGTYKSAVEPLIR 214 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 E++ +A Q + ++ + + ++++R + K L Sbjct: 215 DEMSEEAKQNAKGWLEPMWKNLQQGIADNRQLEIGKIL 252 >gi|315635928|ref|ZP_07891190.1| signal peptide peptidase SppA [Arcobacter butzleri JV22] gi|315479907|gb|EFU70578.1| signal peptide peptidase SppA [Arcobacter butzleri JV22] Length = 294 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 11/289 (3%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K KT V L+++ + ++ ++ +I + G I D + +E IE+ Sbjct: 16 LDFITKYFKT-IVFLTIIYVVFFNSDEERITTKSTANLQKIELVGPIIDVSKTLENIEKA 74 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D + ++ + SPGG+ + AI+++K KPV+ + AS Y S ++ Sbjct: 75 KTDTNIKGVLFVVDSPGGAVAPSVEVAYAIKELKQIKPVVVYASGVIASGSYYASIWADK 134 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S+VGSIGV+ Q K +DK+G+ ++VK+ K +P + + +Q Sbjct: 135 IIANPGSMVGSIGVIMQGVNTKELMDKIGIQTQTVKAGKYKESGTPTRKWTEFEEKQLQS 194 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+D +Y+ F+ V+ +RN+ +D +I+T +AK VGL+D V ++L L Sbjct: 195 VIDDTYNMFITDVATARNLDIKNYTSFADAKIFTSKQAKDVGLVDEVANITVAQKTLAEL 254 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 ++ K+ D + L+ + + + V GL A Sbjct: 255 SKVENPVWKKE----------DKFEKFMDKLVSEAVSQISMNFVTGLKA 293 >gi|294508389|ref|YP_003572447.1| Protease IV [Salinibacter ruber M8] gi|294344717|emb|CBH25495.1| Protease IV [Salinibacter ruber M8] Length = 746 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 107/183 (58%), Gaps = 1/183 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S L E +E D A+++ ++SPGGSA A EA++RA+++ N KPVI + ++AA Sbjct: 479 GSTPLTEALETARTDSRTEAVVLRVNSPGGSAAASEAMWRAVKRTANEKPVIVSMGDVAA 538 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF 167 S GY ++ ++ I+A T+ GSIGV + +KLGV+ V++ P S Sbjct: 539 SGGYYLAAGADSIMADPTTTTGSIGVFGILFNAEGLFEEKLGVTFDGVRTGPYADLYSTT 598 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++P +++ +D +Y+ F+R V+++RN+ + ++ GR+W+G +AK+VGL+D Sbjct: 599 KPLSPDERRLVGGSIDQTYNTFLRRVADARNMDVEAVDEVAQGRVWSGRDAKEVGLVDTT 658 Query: 228 GGQ 230 G Sbjct: 659 GTL 661 Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 9/203 (4%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSA--YAGEAIFRAIQKVKNRK-PVIT 101 G D + L + + S D A+ + + G SA E + +A+ + + PV+ Sbjct: 217 GPSVDLRGLQTALRKASSDSRIEAVWLR--TKGVSADWATLEEVRQAVVQARESGLPVLA 274 Query: 102 EVHEMAASAG-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 E + Y ++ A++ + A S G + L +L V + +++ Sbjct: 275 SSDEFGMTEKDYFLASAADSVFTAPQSAFEYNGFGTTVTFFDGALQRLEVEPQLIRAGKY 334 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAE 217 K+ PF S+++ + + +++++ F+ VSE+R + D L+ + + + A Sbjct: 335 KSAGEPFVRSDLSAPNREQLTALLETTNEQFMTAVSEARGLSTDALNRLAEEDALLSSAA 394 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A + LID + ++EV L L Sbjct: 395 ALEENLIDGLRYEDEVRDRLRGL 417 >gi|319897159|ref|YP_004135354.1| protease iv (signal peptide peptidase) [Haemophilus influenzae F3031] gi|317432663|emb|CBY81026.1| protease IV (signal peptide peptidase) [Haemophilus influenzae F3031] Length = 616 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 14/272 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDD 64 +++ + + +++ +A + + G I D + + + + D+ Sbjct: 301 LVAFDDYLTQFPDRLTPQDNSPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAQDDN 360 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVA 123 S A+++ ++SPGGSA+A E I + + ++ KPVI + MAAS GY IS ++ I+A Sbjct: 361 SVKAVVLRVNSPGGSAFASEMIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIA 420 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ++ GSIG+ +P + + K+GV+ V ++ + S FS + + Q ++ Sbjct: 421 DANTITGSIGIFAMFPTFENSIKKIGVNADGVSTTELANT-SAFSPLAKPVQDIYQTEIE 479 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y F+ +VS+ R + + L+ G++W G++A + L+D +G E L Sbjct: 480 YGYDRFLEIVSKGRQLSKTQVDKLAQGQVWLGSDAFQNDLVDEIGSFNEAVNKAEQLVNQ 539 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 + ++D++ WF D IS+LL DT Sbjct: 540 RQDTAVQDFSVE---WFTDDNVSLISTLLRDT 568 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 111/282 (39%), Gaps = 52/282 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + + L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVMFLGFVLLLVAIISFSSGGKKSTTLIGEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI+ K Sbjct: 75 LNELNGKHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAIRHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + K VI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKAVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ ++ VSE+R I D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYILSVSENRKIKKDRILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLIDVVGGQEEVWQSLYAL 240 + + + A++ GL+ V + ++ + L AL Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTHVVTRLDLEKKLTAL 290 >gi|301156103|emb|CBW15574.1| protease IV (signal peptide peptidase) [Haemophilus parainfluenzae T3T1] Length = 620 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 19/273 (6%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 S + VA + + G I D + + + + ++ A+++ ++SPGGS Sbjct: 320 SVDPNEKNIVAVVNVEGTIIDGESNEESAGGDTIARLLRQAHDNEKVKAVVLRVNSPGGS 379 Query: 80 AYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I + + + K KPV+ + MAAS GY IS ++ IVA + ++ GSIG+ + Sbjct: 380 AFASEIIRQETENLQKAGKPVVVSMGGMAASGGYWISSTADYIVADKNTITGSIGIFALF 439 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + + K+G+S V ++ + AE S S +N + Q +++ Y F+ +VS R Sbjct: 440 PTFENTIKKMGMSTDGVATTDL-AETSALSPLNKNTQDIYQLGIENGYDRFLEVVSRGRQ 498 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + DK ++ G++W G +A K L+D +G + + + AL V+Q+ K D + Sbjct: 499 LSKDKVDKIAQGQVWLGQDAHKNALVDELGDIDVAIEKVGAL-VNQNPDKYMDSFSVQ-- 555 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 W D N S L +KQ K Q L W Sbjct: 556 WLVDEDN----SFLAQLDRKLKQ-KGQALLTNW 583 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 34/242 (14%) Query: 1 MEFVLK---KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQIEDSQE---- 52 + F+ +L+L+ L ++ + A + + G + D+ E Sbjct: 15 LNFIRNLVMNFVFLLFVLALIFLVGLFGDGKKSQVLSGDQGALYLNLTGYLADNTEDMLS 74 Query: 53 ---------------------LIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAI 90 +++ I D+ L+++L+ GG + E + +AI Sbjct: 75 WEKELQRLNNEKVSYKYSTFDVVQSILSAKDDERIRGLVLNLNDFEGGDLPSLEYVGKAI 134 Query: 91 QKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q K KPVI S Y ++ ++ I VG G+ ++ Y K L+KL Sbjct: 135 QSFKESEKPVIAYADNYTQS-QYFLASFADEIYLNPIGQVGIQGLRYENLYFKSMLEKLE 193 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 ++ + K+ PF +++P+A MQ + + +++ + +R+I + L Sbjct: 194 ITPHIFRVGTYKSAVEPFLRDDMSPEARANMQKWLGGMWQNYMQTLMVNRHITANDVLPN 253 Query: 208 SD 209 + Sbjct: 254 AQ 255 >gi|153948435|ref|YP_001400955.1| protease 4 [Yersinia pseudotuberculosis IP 31758] gi|152959930|gb|ABS47391.1| signal peptide peptidase SppA, 67K type [Yersinia pseudotuberculosis IP 31758] Length = 616 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 309 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQTPGNVGGDTLAAQIRQARLDPKIKAVIL 368 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 369 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 428 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 429 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 487 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 488 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 541 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 542 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 579 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 56/284 (19%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + S + + + G I D ++ Sbjct: 39 VGIYFQFQSKPVEPVKGALLVNLSGVIVDQPAINNKLRQWGRELLGASSNRLQENSLFDI 98 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMA 107 +E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 99 VETIRLAKDDDNINGLVLSLS----DLTGADQSSLQYIGKALREFRDTGKKIYAVGDSYN 154 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ +N I + V G Y K L+ L V+ + K+ P Sbjct: 155 QT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYKSAVEPM 213 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-------- 217 ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 214 IRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVAGGSQAK 272 Query: 218 -AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 273 YALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 316 >gi|145642068|ref|ZP_01797639.1| protease IV [Haemophilus influenzae R3021] gi|145273248|gb|EDK13123.1| protease IV [Haemophilus influenzae 22.4-21] Length = 308 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 15 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 74 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 75 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 134 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV+ V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 135 KKIGVNADGVSTTELANT-SAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLSKTQVD 193 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 194 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 250 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 251 GLISTLLRDT 260 >gi|240167730|ref|ZP_04746389.1| protease IV, Ssp [Mycobacterium kansasii ATCC 12478] Length = 596 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 17/261 (6%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 301 SKPTIAVVTVEGPIVNGRGGPQGLPFGPSSAGGDTIAAALREVAADDSISAIVLRVDSPG 360 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R +++ + R K V+ + +AAS GY +S A++ IVA ++ GSIGV+ Sbjct: 361 GSVTASETIWREVKRARRRGKHVVASMGAVAASGGYYVSMAADAIVANPGTITGSIGVIT 420 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ ++LGV ++++++ S P+ + D Y FV V+E Sbjct: 421 GKLVVRDLKERLGVGSETLRTNANADAWSIDEPFTPEQRARREAEADLFYGDFVARVAEG 480 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN+ + V++ GR+WTGA+A + GL+D +GG + L ++ + P Sbjct: 481 RNLSTEAVDVVARGRVWTGADALERGLVDELGGFRTAVRRAKILAGLDEDTDVRLVSYPG 540 Query: 257 NYWFCDLKNLSISSLLEDTIP 277 + L S ++P Sbjct: 541 SSLLDLLLPRMSSRPAAASVP 561 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 96/246 (39%), Gaps = 9/246 (3%) Query: 51 QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ + I R + D +I + SP G+ + + AI KP + Sbjct: 65 RDAVAAIHRAAEDPRVAGMIARVQLPPSPAGAV---QELREAIAAFSAVKPSVAWAETYP 121 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ A I + VG IG +++ LDK G+ + V K+ + F Sbjct: 122 GTLSYYLASAFREIWLQPSGSVGLIGFASNAMFLRDALDKAGIEAEVVTRGEYKSAANLF 181 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +E + + +++S V+ESR I D L+D EA GLID Sbjct: 182 TEDGYTDAHREAVTRMLESLQSQVWHAVAESRRIDVDVLNELADRAPLLRDEAVASGLID 241 Query: 226 VVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +G ++EV+ + L G++ + D + + + S L +P + + Sbjct: 242 RIGFRDEVYARIAELVGIEGVSLESVDTDEKPPRMYLARYAGTARSRLAPPVPSIPGRRS 301 Query: 285 QGLWAV 290 + AV Sbjct: 302 KPTIAV 307 >gi|329123556|ref|ZP_08252118.1| signal peptide peptidase SppA [Haemophilus aegyptius ATCC 11116] gi|327470298|gb|EGF15758.1| signal peptide peptidase SppA [Haemophilus aegyptius ATCC 11116] Length = 616 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 14/272 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDD 64 +++ + + +++ +A + + G I D + + + + D+ Sbjct: 301 LVAFDDYLTQFPDRLTPQDNSPNKIAVVNVEGTIIDGESDEENAGGDTIARILRKAQDDN 360 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVA 123 S A+++ ++SPGGSA+A E I + + ++ KPVI + MAAS GY IS ++ I+A Sbjct: 361 SVKAVVLRVNSPGGSAFASEMIRQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIA 420 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ++ GSIG+ +P + + K+GV+ V ++ + S FS + + Q ++ Sbjct: 421 DANTITGSIGIFAMFPTFENSIKKIGVNADGVSTTELANT-SAFSPLAKPVQDIYQTEIE 479 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y F+ +VS+ R + + L+ G++W G++A + L+D +G E L Sbjct: 480 YGYDRFLEIVSKGRQLSKTQVDKLAQGQVWLGSDAFQNDLVDEIGSFNEAVNKAEQLVNQ 539 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 + ++D++ WF D IS+LL DT Sbjct: 540 RQDTAVQDFSVE---WFTDDNVSLISTLLRDT 568 Score = 92.5 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 111/282 (39%), Gaps = 52/282 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLIGEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI+ K Sbjct: 75 LNELNGKHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAIRHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + K VI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKSVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ ++ VSE+R I D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYILSVSENRKIKKDRILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLIDVVGGQEEVWQSLYAL 240 + + + A++ GL+ V + ++ + L AL Sbjct: 249 NAKQYLAELKELKGNSTAYAQQRGLVTDVVTRLDLEKKLTAL 290 >gi|228470849|ref|ZP_04055696.1| signal peptide peptidase SppA, 67K type [Porphyromonas uenonis 60-3] gi|228307416|gb|EEK16426.1| signal peptide peptidase SppA, 67K type [Porphyromonas uenonis 60-3] Length = 594 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 14/237 (5%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERIS 61 L V+L VY + SS ++ + G+I + +L +RI + Sbjct: 289 LYFVSLRDVYATRSS-ARSGEANIGVLFAEGEINVEETDSPFNTKKVVTDQLADRILEMG 347 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 DD AL+V ++SPGGS+Y E ++ A+ K KPV+ + + AAS GY +S ++ I Sbjct: 348 EDDDYDALVVRVNSPGGSSYISEQLWYAVHKASQNKPVVISMGDYAASGGYYMSSGASYI 407 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A +++ GSIG+ P +K+GV VK++ + + + Q Sbjct: 408 FAEPSTITGSIGIFGVVPNATKLANKIGVHQDVVKTARYADLGALDRPWTEEERGLFQQY 467 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+ Y F++ VSE R + D+ ++ GR+WTGA+A +GL+D +GG ++ Sbjct: 468 VNRGYELFLKRVSEGRGMTRDQVDSIAQGRVWTGAQALGLGLVDELGGLQDAIAYAA 524 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +IE I+ DD + +++ PG + EA+ A++ K I + + GY Sbjct: 89 VIEAIDEAKNDDRIKGIYLNMMDPGCGFASAEALRGALEDFKQTGKFIVSYSDFYSLKGY 148 Query: 113 LISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 ++ ++ + + GSI G+ + K LDK+GV + K K+ P+ Sbjct: 149 YLASVADQLYVNKE---GSIAFDGLAGGAVFFKDLLDKIGVEMMVFKVGTFKSAVEPYML 205 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLID 225 + ++ + + + + V SR + + L+D + T LID Sbjct: 206 NSMSEANRTQISSYLGDIWGRILGEVGTSRGLDSVRLQALADSMQSVQTTDSYLANKLID 265 Query: 226 VVGGQEEVWQSLYAL 240 Q++ + L +L Sbjct: 266 GALYQDQALEQLCSL 280 >gi|325955083|ref|YP_004238743.1| signal peptide peptidase SppA, 67K type [Weeksella virosa DSM 16922] gi|323437701|gb|ADX68165.1| signal peptide peptidase SppA, 67K type [Weeksella virosa DSM 16922] Length = 591 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 11/279 (3%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------SQELIERIERISRDDSATALI 70 +++ + N + + G I++ S+ E I ++ DD A++ Sbjct: 292 FVSLDNYILQLDSNSNKNKIGILYASGAIKEGDGFDGIQSKTYTEAIREMAEDDKIKAVV 351 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++SPGGSA A E I + ++ +KPV+ ++AAS GY I+ +S I A +++ G Sbjct: 352 LRINSPGGSANASEQILYELDLLRKKKPVVVSFGDVAASGGYYIAQSSERIFANPSTITG 411 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWF 189 SIGVL P VK + +G++ K++ + S + ++ A + M+ ++ YH F Sbjct: 412 SIGVLGMIPNVKKLANSVGITTDIAKTNANADQLKSLTNPLSADAERTMRKNIELIYHQF 471 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V +S++R + ++ + G +W+G AK++GLID G ++ L + Sbjct: 472 VSHISKNRKMTFEAVDKVGGGHVWSGTRAKELGLIDEFGNLQDAVNYAAKLVKLDTYS-- 529 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + P + F + + ++ + T+ Q L+ Sbjct: 530 TEAFPKRKDAFEEFMASITGNNIDAKLAQELGTEGQALY 568 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 109/303 (35%), Gaps = 42/303 (13%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN------SPHVARIAIRGQIEDSQ------ 51 V I + S++ L ++ F + S + V I + I +S+ Sbjct: 8 VFSTIVGNLLTFSIILLVLIGFIFFSTLTSTPTKPIKDGSVLEITLDSPIMESEMDRIPM 67 Query: 52 ----------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +++ I+ D+ + + + G + I +A++ K Sbjct: 68 NIFHLSKKSNNSFYLEDILRAIKNAETDNRIRGISLKIEHFQGGFTQADDIRKALEDFKK 127 Query: 96 R-KPVITEVHEMA-ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K + + + S Y I ++ I + G+ + + K F DK G+ + Sbjct: 128 SGKFIYAFTNNTSQTS--YYIQTVADKIYQNPLGITMLQGLGAEVMFFKNFGDKYGIDFQ 185 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY----DKTLVL 207 ++ K+ P+ ++++P+ + + + ++ + +++ R + K L Sbjct: 186 VIRHGAYKSAVEPYLRNDLSPENREQITEYMNDIWTNISTKMAKDRKLSLIDFNTKVDSL 245 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + ++K+ LID + QE + + +D S + K++ D L Sbjct: 246 YA---FIPEKSKENKLIDELM-QESQYDLMILKKLDDSATDLSKKAKNKHFVSLDNYILQ 301 Query: 268 ISS 270 + S Sbjct: 302 LDS 304 >gi|73662359|ref|YP_301140.1| protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494874|dbj|BAE18195.1| putative protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 330 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 121/222 (54%), Gaps = 3/222 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 + + +++++ + +DDS +++++++PGG Y + I+ I+++K + K + + MA Sbjct: 82 NHEAFLKQLDNVKKDDSIKGVLLTVNTPGGGTYPSDEIYEKIKEIKQKHKKIYVHMDSMA 141 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS ++ I A ++ GSIGV+ LG+ +KS K S Sbjct: 142 ASGGYYISAPADKIYAGPQTMTGSIGVIMSSIDYSGLQKNLGIKQNVIKSGEHKDILSSS 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 E+ + ++Q V+D S++ FV +V + R++P K L+DGRI++ +AK GLID + Sbjct: 202 REMTSEERDILQSVLDDSFNRFVNIVKDGRDMPESKVRKLADGRIYSAQQAKSNGLIDEI 261 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 G +++ ++L ++ ++ +++ WF + N+ S Sbjct: 262 GYEDQTVKALKK-DINAKDAEVFEYST-DGGWFSSMYNVKSS 301 >gi|309751034|gb|ADO81018.1| Protease IV [Haemophilus influenzae R2866] Length = 615 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVHADGVSTTELAKT-SAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 114/295 (38%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLTGDGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIVYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLAALFGKGSDGKANLIE 303 >gi|255036559|ref|YP_003087180.1| signal peptide peptidase SppA, 67K type [Dyadobacter fermentans DSM 18053] gi|254949315|gb|ACT94015.1| signal peptide peptidase SppA, 67K type [Dyadobacter fermentans DSM 18053] Length = 588 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 1/222 (0%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S++ ++ ++ I +D A+++ ++SPGGSA A + ++R IQ +KPVI + ++AAS Sbjct: 327 SEKFVKELKEIRENDKIKAVVIRINSPGGSALASDVMWREIQLTAKKKPVIASMSDVAAS 386 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFS 168 GY ++ + IVA ++ GSIG+ V F+ +KLG++ V +SP P+ Sbjct: 387 GGYYMAMGCDTIVAQPNTITGSIGIFGLIFNVTDFMNNKLGITFDGVGTSPHADWPTATR 446 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 E+ M+Q V+ Y F R +E R +P +K L+ GR+W+G EAK+ GL+DV+G Sbjct: 447 EMTEFEKGMIQKSVNEGYETFTRKAAEGRKMPVEKLKSLAQGRVWSGVEAKQNGLVDVLG 506 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 G ++ + + P K ++ + + Sbjct: 507 GVDDAIKLAAKAAKLNEGDYRIRYYPEKKRPLDEMFEKLMGN 548 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 8/217 (3%) Query: 41 IAIRGQ--IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I G+ + +++++ ++ DD + + P E I A+ + K K Sbjct: 69 IPFSGEDNVVGLKDILDALKSAKADDKIKGIYLKTEGPEAGWATLEEIRTALLEFKKSKK 128 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 + E + GY I+ ++ I + G+ +Y + K DKL + + Sbjct: 129 FVVTYGESYSEKGYYIASVADKIYLNPAGGIEWNGLSAEYSFFKGTFDKLEIKPLVFRVG 188 Query: 159 PMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTG 215 K+ FS +++ + + +++ + F++ +S SR+IP D+ L+D + Sbjct: 189 EFKSAIEMFSRQDMSEASKKQSVELIGAINDNFLKNISASRSIPVDELKNLADSLAVENP 248 Query: 216 AEAKKVGLIDVVGGQEEVWQSLY---ALGVDQSIRKI 249 A K I +G Q+E+ ++ + D+SI + Sbjct: 249 KAALKYKFITHMGYQDELEAAMKKDLKVAADKSISYV 285 >gi|319776392|ref|YP_004138880.1| protease IV (signal peptide peptidase) [Haemophilus influenzae F3047] gi|317450983|emb|CBY87213.1| protease IV (signal peptide peptidase) [Haemophilus influenzae F3047] Length = 615 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + ++ + + D+S A+I+ ++SPGGSA+A E I Sbjct: 322 NKIAVVNVEGTIIDGESDEENAGGDTIVRILRKAHDDNSVKAVILRVNSPGGSAFASEII 381 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 382 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFAMFPTFENSI 441 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV+ V ++ + S F + + Q ++ Y F+ +VS+ R + + Sbjct: 442 KKIGVNADGVSTTELAKT-SAFFPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVD 500 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 501 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 557 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 558 SLISTLLRDT 567 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTTLIGDGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNYS-QGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLAALFGKGSDGKANLIE 303 >gi|301167932|emb|CBW27517.1| putative protease [Bacteriovorax marinus SJ] Length = 359 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 14/270 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSP---HVARIAIRGQIEDSQELIERIERISRDD 64 +++ T TV F+ S V D+ +A I + G I ++E +E +E+ +D Sbjct: 63 FLFFVILMVFATFTVKVFNDESKVFDSQNKRGQIAVIEVSGPIMQAKETVELLEKAEKDK 122 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKV----------KNRKPVITEVHEMAASAGYLI 114 S A+I+ ++SPGG+ + I+ I+++ + KP+ +AAS GY + Sbjct: 123 SVKAIILRINSPGGAVGPTQEIYEEIRRIDSAYNPEDKTASGKPIYASFDAIAASGGYYL 182 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 A+ I A+ +L GSIGV+ + + + V VK+ K SP + + Sbjct: 183 GAAARKIYASPGTLTGSIGVIMNFTDLSKVFEYFKVKQTPVKAGKYKDIGSPHRSMTNEE 242 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 +M ++ + F+R + +R + L L+ G+I++G EAK++GL+D +G + Sbjct: 243 SGLMNKMIQVVHKQFMRDIEATRKEKLTKEILELAQGQIFSGEEAKELGLVDELGSLWKA 302 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + ++ + +K K F DL Sbjct: 303 GRDIHKELNLEGEFALKYIKKKKKSGFWDL 332 >gi|149188174|ref|ZP_01866469.1| protease IV [Vibrio shilonii AK1] gi|148838162|gb|EDL55104.1| protease IV [Vibrio shilonii AK1] Length = 617 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 13/270 (4%) Query: 35 SPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 VA I G I D ++ +++ +DS ++++ + SPGGSA+A E Sbjct: 325 DNQVAVIVASGTIMDGEQPRGTVGGDTTAALLKQARENDSVKSVVLRVDSPGGSAFASEV 384 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +Q +++ KPV+ + +AAS GY IS +N I+A T++ GSIG+ + Sbjct: 385 IRNEVQALRDAGKPVVVSMSSVAASGGYWISMNANKIMAQPTTITGSIGIFSVVTTFEKG 444 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ +G++ V +SP + ++ A + Q +++ Y F+ LV+ +RN+ Sbjct: 445 LNNIGINTDGVGTSPFSGVG-VTTGISEGASKAFQMGIENGYKRFITLVANNRNMSVTDV 503 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+WTG +A + GL+D +G ++ LG I +++ P + D Sbjct: 504 DSVAQGRVWTGKDALERGLVDQIGDFDDAVALAAELGGMEKYDIYWVEEPLSPAQQFVQD 563 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + SL D + Q+ + + Sbjct: 564 IMQQVKVSLGLDISAWVPQSLLPVATQLQQ 593 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 101/280 (36%), Gaps = 47/280 (16%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHV-----ARIAIRGQIEDSQ------- 51 V+ + + L + + + + VE V + I G I + Sbjct: 18 VINFTRLAIINLLFFAVIAMIYFAFTQVEPAPATVKKESALVLNISGPIVEQSSYVNPMD 77 Query: 52 ------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQK 92 ++++ I S DDS L++SL P S I +A+ + Sbjct: 78 SVTGSLFGRDLPKENVLFDIVDSIRHASTDDSVKGLVLSLRDMPETSLTKLRYIAKALNE 137 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K KP+ S Y ++ ++ + A V G Y K L+KL V+ Sbjct: 138 FKATGKPIYAYGAFYNQS-QYYLASYADKVYLAPDGAVLIKGYSAYSMYYKTLLEKLDVT 196 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD------- 202 + K+ PF +++ A + V + +V V+ +R I Sbjct: 197 THVFRVGTYKSAVEPFLRDDMSDAAKESATRWVSQLWGAYVDDVASNRQIETSVLTPTMD 256 Query: 203 ---KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 K L +DG A +K++GL+D + +++V Q++ Sbjct: 257 EFLKELEAADGD--LAALSKQLGLVDELVTKQQVNQAMVE 294 >gi|145639083|ref|ZP_01794691.1| protease IV [Haemophilus influenzae PittII] gi|145272055|gb|EDK11964.1| protease IV [Haemophilus influenzae PittII] Length = 576 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 14/250 (5%) Query: 36 PHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + + G I D + + + + D+S A+I+ ++SPGGSA+A E I Sbjct: 283 NKIAVVNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEII 342 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + + ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + Sbjct: 343 RQETENLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSI 402 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV V ++ + S FS + + Q ++ Y F+ +VS+ R + + Sbjct: 403 KKIGVHADGVSTTELAKT-SAFSPLAKPVQDIYQTEIEYGYDRFLEIVSKGRQLSKTQVD 461 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G++W G++A + GL+D +G E L + ++D++ WF D Sbjct: 462 KLAQGQVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNV 518 Query: 266 LSISSLLEDT 275 IS+LL DT Sbjct: 519 SLISTLLRDT 528 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 26/219 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I++ D L++ L+ G+ + I AI K+ KPVI + Sbjct: 52 DVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFKDAGKPVIVYADNY-SQ 110 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ ++ I +GS+ + Y K LDKL V+ + K+ P Sbjct: 111 GQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAVTPHIFRVGTYKSAVEP 167 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-------- 216 F ++++ +A MQ + ++ +V VSE+RNI D L + + + Sbjct: 168 FLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP--NAKQYLAELKALKGNS 225 Query: 217 --EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 A++ GL+ DVV ++ +L+ G D I+ Sbjct: 226 TAYAQQRGLVTDVVTRLDLDKKLAALFGKGSDGKANLIE 264 >gi|253996198|ref|YP_003048262.1| peptidase S49 [Methylotenera mobilis JLW8] gi|253982877|gb|ACT47735.1| peptidase S49 [Methylotenera mobilis JLW8] Length = 332 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 11/243 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + Y+++ L+ L + + H A I I G I+ + +I ++ Sbjct: 47 FKSLTFGYLLIFLLMLFGIM---GGDKKSLEAHTALIEINGVIQAGGDVTADAVISSLKE 103 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISC 116 + +I+ ++SPGGS I I++ K PV V ++ AS GY I+ Sbjct: 104 AYDNKGTKGIILRVNSPGGSPVQAGIINDEIRRQKTLHPSIPVYAVVEDICASGGYYIAA 163 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL + K+GV + + + KA PFS VNP + Sbjct: 164 AADKIYVDKASIVGSIGVLMDGYGFTEAMKKVGVERRLMTAGENKAMLDPFSPVNPHHQE 223 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + Q +++ + F +V + R +T G W+G ++ K+GL D +G E V + Sbjct: 224 LAQAMLNEIHEQFKTVVRQGRGARLKETPETFSGLFWSGEQSIKIGLADGMGSAEYVARE 283 Query: 237 LYA 239 + Sbjct: 284 VIK 286 >gi|119945670|ref|YP_943350.1| signal peptide peptidase SppA, 67K type [Psychromonas ingrahamii 37] gi|119864274|gb|ABM03751.1| signal peptide peptidase SppA, 67K type [Psychromonas ingrahamii 37] Length = 617 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 12/251 (4%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 V +A + G+I + +E D+ A+++ + SPGGSA+ Sbjct: 322 VSGAKDQIAVVHASGEILSGTQPSNVIGGDSFSQLLETALNDNQIKAVVIRIDSPGGSAF 381 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + I +K K V+ + +AAS GY I+ A++ I+A T+L GSIG+ Y Sbjct: 382 ASEKIRQHILALKKADKKVVVSMASVAASGGYWIASAADYIIATPTTLTGSIGIFGMYAS 441 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L+ G+ + ++ + + SP +NP+ +++Q +++ Y F+ +V++ RN+ Sbjct: 442 ADKALNNFGIFNDGIGTTEL-SSFSPTRALNPELAEIIQLGIENGYQQFLEVVAQGRNMT 500 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + ++ GR+WTG +AK +GLID +G ++ + L Q +K P + Sbjct: 501 VAEVDKIAQGRVWTGVDAKSLGLIDELGNLQDAINTASRLASLQDY-GVKIIQPVLSTKQ 559 Query: 261 CDLKNLSISSL 271 + L + ++ Sbjct: 560 HLINELLLGAV 570 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 81/205 (39%), Gaps = 19/205 (9%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAY-AGEAIFRAIQKVKNRKPVITEVHEMAAS 109 +++ I R +D +A+++ L G+A I +A+ K+ +T V + + Sbjct: 92 DKILNTIHRAQQDPKISAILLELDGLDGAAINHIADIGKALNDFKSTGKSVTAVADNYSQ 151 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 YL++ ++ I +V G Y K LDKL ++ K K+ PF+ Sbjct: 152 TQYLLASYADKIYLNPQGMVLLPGYSVYRLYFKEALDKLLITPHIFKVGTYKSFVEPFTT 211 Query: 170 VNPKAVQMM--QDVVDSSYHWFVRLVSESRN-------------IPYDKTLVL-SDGRIW 213 + ++ +D + ++ + R + K+ ++ + G Sbjct: 212 NKMSEASKLANKNWLDQLWKNYIDTILFQRKDNSKISVQSISPTLKQLKSSLIKASGN-- 269 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLY 238 + A +VGL+D + + +V L Sbjct: 270 SAVYALQVGLVDDLKNRNDVIDKLK 294 >gi|261840109|gb|ACX99874.1| protease IV, 36K short form [Helicobacter pylori 52] Length = 292 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 125/245 (51%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS V P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESVPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|167470630|ref|ZP_02335334.1| protease 4 [Yersinia pestis FV-1] Length = 586 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 26/285 (9%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIV 71 +Y + +A + G I D L +I + D A+I+ Sbjct: 279 ISIYDYQPTPAPQQGEQIAVLFANGAIIDGPQPPGNVGGDTLAAQIRQARLDPKIKAVIL 338 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGS A E I + ++ KP++ + MAAS GY IS +N IVA+ ++L G Sbjct: 339 RVNSPGGSVSASELIRAELAALRAAHKPLVVSMGGMAASGGYWISTPANYIVASPSTLTG 398 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIG+ + L +GV V +SP+ S + P+ QMMQ +++ Y F+ Sbjct: 399 SIGIFGVINTFQNSLASIGVHTDGVATSPLADV-SLTKALPPEFSQMMQINIENGYKTFI 457 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ SR+ ++ ++ G +W G +AK GL+D +G ++ + L K+K Sbjct: 458 DLVATSRHKTPEQVDQIAQGHVWIGLDAKSNGLVDQLGDFDDAVKKAAELA------KLK 511 Query: 251 DWNPPKNYWFCDLKNLS--ISSLLEDTIPLMKQTKVQGLWAVWNP 293 W + WF D +LS I + ++ M +Q W P Sbjct: 512 TW---QLNWFVDEPSLSDLILGQMSASVHAMLPAAIQT----WLP 549 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 99/290 (34%), Gaps = 56/290 (19%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------------ 50 L ++ +YF + S + + + G I D Sbjct: 3 LLILIGLGIYFQFQSKPVEPVKGALLVNLSGVIVDQPAINNKLRQWGRELLGASSNRLQE 62 Query: 51 ---QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVIT 101 +++E I DD+ L++SLS + I +A+++ ++ K + Sbjct: 63 NSLFDIVETIRLAKDDDNINGLVLSLS----DLTGADQSSLQYIGKALREFRDTGKKIYA 118 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + Y ++ +N I + V G Y K L+ L V+ + K Sbjct: 119 VGDSYNQT-QYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLENLKVTTNIFRVGTYK 177 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-- 217 + P ++++ A + V + ++ VS +R + ++ + G + +G + Sbjct: 178 SAVEPMIRNDMSAAAREADSRWVGGLWQNYLTTVSANRRLTPEQLFPGAAG-VISGLQVA 236 Query: 218 -------AKKVGLIDVVGGQEEVWQSLYAL------GVDQSIRKIKDWNP 254 A L+D + + EV +L D + I D+ P Sbjct: 237 GGSQAKYALDSKLVDQLAARPEVESALVEAFGWNKKTNDFNYISIYDYQP 286 >gi|326795267|ref|YP_004313087.1| peptidase S49 [Marinomonas mediterranea MMB-1] gi|326546031|gb|ADZ91251.1| peptidase S49 [Marinomonas mediterranea MMB-1] Length = 367 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 17/274 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIERIE 58 KI R+V L L+ V +S SS VED VA I +RG I D+ E IE Sbjct: 88 KIFFRFVGLFLIVGIFVGWSASSVVEDAALTGDSVALIPMRGTIGAGLDIDADEYSLLIE 147 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 D A+++ ++SPGGS ++ + + P+I V +MAAS GY I+ Sbjct: 148 DAYADARTKAVVIKMNSPGGSPVHSGILYDLLMSKRKSYPDIPLIVVVSDMAASGGYYIA 207 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV+ L+ +GV ++ + KA PFS + P A Sbjct: 208 SAADEIYADKASLVGSIGVVSPGFDASGLLESIGVERRTFTAGEDKAFLDPFSPMTPSAA 267 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q Q V+DS++ F+ V + R L G ++TG +A GLID + V Sbjct: 268 QKWQSVLDSTHKQFIEAVKKGRGDRLSLERDLFTGMVFTGEQAVSYGLIDGLDYTGHVLS 327 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 S ++ ++ + + P + W K L IS Sbjct: 328 SRFS-----NLTPV-YYEPREEPWKEVAKELGIS 355 >gi|282164165|ref|YP_003356550.1| putative signal peptide peptidase [Methanocella paludicola SANAE] gi|282156479|dbj|BAI61567.1| putative signal peptide peptidase [Methanocella paludicola SANAE] Length = 293 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 26/274 (9%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHV--------------EDNSPHVARIAIRGQIED---- 49 + +V++ L+ +TV++ +++ + VA I + GQ+ Sbjct: 17 LAAVFVVIGLLAVTVLWSAYAGITHQQVIPGSIAKAFGGGKTQKVAVIYVEGQMVADKSE 76 Query: 50 --------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 S ++++ + + D A+++ ++SPGG+ A E I I + K KPV+ Sbjct: 77 DAAKGSAFSSDIVKCMRAATDDPEVKAIVLRVNSPGGTPVAAEEIISQINRTKAVKPVVI 136 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +MA SA Y IS +N IVA + GSIGV++ + D+LGV++ KS K Sbjct: 137 SMGDMATSAAYYISSQANRIVANPDTFTGSIGVIWTFKNKSKAYDELGVTVYVAKSGNFK 196 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 S + + + +++ SY FV V++ RN+ DK ++DGRI+TG AK + Sbjct: 197 DMGSEWRGLTENEKSYVNAIINESYDRFVTNVAKGRNMSVDKVKEIADGRIFTGTTAKGM 256 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 GL+D +GG + + + I N P Sbjct: 257 GLVDDIGGLYDAVSIARNMSNTKGKVTIVYMNEP 290 >gi|288940470|ref|YP_003442710.1| peptidase S49 [Allochromatium vinosum DSM 180] gi|288895842|gb|ADC61678.1| peptidase S49 [Allochromatium vinosum DSM 180] Length = 336 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 19/292 (6%) Query: 6 KKIKTRYVMLSLVTLTVVYFS-----WSSHVEDNSPHVARIAIRGQIED-----SQELIE 55 ++ T + +L LV L V + S V+ H A I I+G I + +I Sbjct: 41 RRWATAFKLLILVYLIGVLIAANSTGLSDAVKVGEDHTALIEIKGVIASDSDASADRVIT 100 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---------KPVITEVHEM 106 + +++ ++SPGGS I I+++K + PV ++ Sbjct: 101 ALRAAFEAKHVKGIVLRINSPGGSPVQAGYINDEIKRLKAKYKKDHDGKDMPVYAVAVDL 160 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS GY ++ ++ I + SLVGSIGV + + +LG+ + + + K P Sbjct: 161 CASGGYYVAVGADAIYVDKASLVGSIGVRIDSFGFQEAMQELGIERRLLTAGANKGILDP 220 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 FS + +Q V+D + F+ V + R L G W+G EA ++GL D Sbjct: 221 FSPLGDSQRAFIQSVLDRLHGQFIDAVKQGRGDKLKGGDELFSGLFWSGQEAVELGLADG 280 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 +G +V + L + +D F L + L + L Sbjct: 281 LGSSSQVARELIKAEKIVEYTEKRDLLESIAKRFGALVGAGMLEGLGVSTGL 332 >gi|296168584|ref|ZP_06850388.1| protease IV [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896647|gb|EFG76286.1| protease IV [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 594 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 21/275 (7%) Query: 35 SPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPGG 78 P +A I + G I D + + + DDS +A+++ ++SPGG Sbjct: 300 KPTLAVITLDGMIVDGRGGPQFLPFGAATAGGDTIGAALREAAADDSVSAIVLRVNSPGG 359 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + A E+I+R + + + R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 360 TITASESIWREVTRARKRGKPVVASMGAVAASGGYYVSMGADAIVANPATVTGSIGVITG 419 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 ++ L++LGV +V+++ S + P+ + D Y FV+ V+E+R Sbjct: 420 KLVIRDLLERLGVGSDTVRTNANADAWSIDAPFTPEQRAHREAEADLFYADFVQRVAEAR 479 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 N+ + ++ GRIWTGA+A GL+D +GG + L ++ P + Sbjct: 480 NLTTEAAESVAQGRIWTGADALDRGLVDELGGFRAAVRRAKVLAGLDEDSDVRIVAYPSS 539 Query: 258 YWFC----DLKNLSISSLLEDTIPLMKQTKVQGLW 288 + ++ L D + + V Sbjct: 540 SLLDMVRPRASSQPAAASLPDALGALLGRTVTSFL 574 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 82/216 (37%), Gaps = 10/216 (4%) Query: 51 QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ + + R + D LI + SP A + + AI KP + Sbjct: 64 RDAVAAVHRAAEDPRVAGLIARVQLAASP---PAAVQELREAIAAFSAAKPSLAWAETYP 120 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ A + + VG IG +++ DK G+ + V K+ + F Sbjct: 121 GTLSYYLASAFREVWMQPSGSVGLIGFASNETFLRDAFDKAGIEPQFVARGQYKSWANRF 180 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +E + + +++S R +++SR + L+D +A GL+D Sbjct: 181 TEHGFTTAHREAVTRMLESLQEQTWRAIAQSRKLDPGALDTLADRAPLLRDDAVAAGLLD 240 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKNYW 259 +G ++E + + + + + PP+ Y Sbjct: 241 RIGFRDEAYARIAEMAGAPADSADDSDDTAPPRLYL 276 >gi|152996263|ref|YP_001341098.1| signal peptide peptidase SppA, 36K type [Marinomonas sp. MWYL1] gi|150837187|gb|ABR71163.1| signal peptide peptidase SppA, 36K type [Marinomonas sp. MWYL1] Length = 339 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 17/274 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVED---NSPHVARIAIRGQIE-----DSQELIERIE 58 +I R+ L++ V + S+ +D VA I +RG I +S E + ++ Sbjct: 60 RIFFRFTTLAIFLAVVGGWFAKSNFQDVSLEGDIVAMIPMRGVIGADNEIESSEFVGLLD 119 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 ++ +++ ++SPGGS I+ AI+ + PV+ V +MAAS GY I+ Sbjct: 120 AAYQNSRLKGVVIEMNSPGGSPVHSGIIYDAIRAKEQNYPDIPVLVVVEDMAASGGYYIA 179 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A+N I A + SLVGSIGV+ L+K+GV ++ + KA PF+ + +A Sbjct: 180 SAANEIYADKASLVGSIGVISSGFDASNLLEKIGVERRTFTAGRNKAFLDPFAPMTEEAK 239 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q V+D ++ F+ V E R T + G ++TG++A K+GLID + ++ Sbjct: 240 VKWQAVLDETHQQFINAVKEGRGDRLVITDDVFSGMVFTGSQAIKIGLIDGLASVTDILD 299 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + + + P ++ W K + Sbjct: 300 TRF------PDAEPVVYEPKQDSWKELAKEFGVE 327 >gi|255320325|ref|ZP_05361509.1| periplasmic serine protease [Acinetobacter radioresistens SK82] gi|262379389|ref|ZP_06072545.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] gi|255302520|gb|EET81753.1| periplasmic serine protease [Acinetobacter radioresistens SK82] gi|262298846|gb|EEY86759.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] Length = 338 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 17/268 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 S ++ H+A I I G I+ +S++ + ++R ++ A++++++SPGGS Sbjct: 72 SGAGSSSNAHLAVIDIIGTIDSSDRSVNSEDTNKALKRAFEAKNSQAIVLNINSPGGSPV 131 Query: 82 AGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I++ I+ K + K V + +M AS Y I+ A++ I +SLVGSIGV+ Sbjct: 132 QSDEIWQEIRYYKQQYPEKKVYALIGDMGASGAYYIASAADEIWVNPSSLVGSIGVIMPN 191 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 V KLGV +++ S K S VNP + +Q V+D+ + F+ V E R Sbjct: 192 YGVMGLAQKLGVEDRTLTSGDNKDILSMTKPVNPAQREHVQAVLDNVHSHFIAAVKEGRG 251 Query: 199 IPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + G W+G +A K+G+ D G + + L + + D+ ++ Sbjct: 252 KRLKSNDPAIFSGLFWSGEQAVKLGVADRTGSINSLKREL-------KLDNVLDYTVQRS 304 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + L + + + +Q K+Q Sbjct: 305 PFESVLGRVGSEIGQGFSESVTQQLKIQ 332 >gi|15802177|ref|NP_288199.1| protease 4 [Escherichia coli O157:H7 EDL933] gi|12515791|gb|AAG56752.1|AE005399_6 protease IV, a signal peptide peptidase [Escherichia coli O157:H7 str. EDL933] Length = 618 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 310 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 370 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A QMMQ +++ Y F Sbjct: 430 GSIGIFGVITTVZNSLDSIGVHTDGVSTSPLADV-SITRALPPEAQQMMQLSIENGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ A + Sbjct: 489 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAK-AAELAKAKQWHL 547 Query: 250 KDWNPPKNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 + + ++ + N+S S ++L D M + Sbjct: 548 EYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPL 584 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 45/290 (15%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDS---------------- 50 + ++ L LV + + ++ + A + I G I D Sbjct: 27 LNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLG 86 Query: 51 -----------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++ I + D + T +++ L + GG + + I +A+++ ++ K Sbjct: 87 ASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGK 146 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + Y ++ +N I + +V G Y K LDKL VS + Sbjct: 147 PVYAVGENYS-QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRV 205 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-- 213 K+ PF +++P A + + + ++ V+ +R IP + + G + Sbjct: 206 GTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGL 265 Query: 214 ------TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 T A + L+D + E+ ++L D++ R I ++ Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKADKNYRAISYYD 315 >gi|308185198|ref|YP_003929331.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori SJM180] gi|308061118|gb|ADO03014.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori SJM180] Length = 292 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS N P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSNPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|268317676|ref|YP_003291395.1| signal peptide peptidase SppA, 67K type [Rhodothermus marinus DSM 4252] gi|262335210|gb|ACY49007.1| signal peptide peptidase SppA, 67K type [Rhodothermus marinus DSM 4252] Length = 604 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 137/277 (49%), Gaps = 6/277 (2%) Query: 21 TVVYFSWSSHVEDNSPH--VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 V ++ + V S V + G++ S+ LI +E + + A+++ ++SPGG Sbjct: 307 IAVVYAVGTIVPGKSQQEPVPVPFLGGRMLGSETLIAALEEARQSERVKAVVLRINSPGG 366 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SA A EA+++AI++ KPVI + ++AAS GY IS A++ IVA ++ GSIGV+ Sbjct: 367 SAAASEAMWQAIRRTAEEKPVIVSMGDVAASGGYWISTAADTIVADPLTITGSIGVIGML 426 Query: 139 PYVKPFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + K+G++ +++SP S P V+ +Q + ++Y F++ VS++R Sbjct: 427 LNAGGLFENKIGITYDLLRTSPYADMFSGLVPPEPYEVERLQQTIMATYRTFLQKVSQAR 486 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKDWNPPK 256 +P D + GR+W G A ++GL+DV+GG + + G+ +I+ P+ Sbjct: 487 GLPVDSVDAIGGGRVWIGETAHRIGLVDVLGGLDRAIAIAAEKAGLAPGTYRIRVL--PR 544 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 F + + + T + + + + P Sbjct: 545 PRMFAERLAEQLEARAVQTWRNLTASPATRMLEAYRP 581 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 92/206 (44%), Gaps = 8/206 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 +L +++ + D A+ + L +P S + E + A+ + K +I + Sbjct: 79 DLTHALKKAAADRRIEAVWLRLQNPQLSWASLEEVRTALVDFRASGKLLIASCEDFGMDE 138 Query: 111 G-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ A++ + A S G + K LDKL V + V++ K+ PF Sbjct: 139 ATYFLASAADSVFAGPESFFEFNGFYLTAEFYKRLLDKLEVEAQVVRAGAFKSAGEPFVR 198 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDV 226 ++ + +Q ++D+ F+ V+E+R + + L+ + + + EA + GL+D Sbjct: 199 EHLSEENRLQLQALLDAYNRRFLETVAEARGLSVEDVNRLATEQLLLSAEEAVQAGLLDG 258 Query: 227 V---GGQEEVWQSLYALGVDQSIRKI 249 + G E + ++ G D+ +R++ Sbjct: 259 LRDAGQIERMLKTHLGYGPDEKLRRV 284 >gi|213417443|ref|ZP_03350585.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 543 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 12/235 (5%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ + MAAS GY IS +N IVA+ ++L Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLT 429 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ L +GV V +SP+ S ++P+ QMMQ ++ Y F Sbjct: 430 GSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTKALSPEVQQMMQLSIEYGYKRF 488 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + LV+++R ++ ++ G +WTG +AK GL+D +G ++ L + Sbjct: 489 ITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLK 543 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|315641101|ref|ZP_07896180.1| U7 family peptidase [Enterococcus italicus DSM 15952] gi|315483109|gb|EFU73626.1| U7 family peptidase [Enterococcus italicus DSM 15952] Length = 343 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 15/235 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPG 77 D+ + ++ + G I D+ Q+L+ ++ I DDS +++ ++SPG Sbjct: 57 GDSDKRIVQLTVDGTISDTGESTSLFSSEGYNHQQLLSELKAIQEDDSIKGVLLVVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRKPV-ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I + I KV+ + + + MAAS GY IS +++ I A ++ GSIGV+ Sbjct: 117 GGVYESAEIAKEIAKVQQKGKILYVSMKSMAASGGYYISASADKIFATNETITGSIGVIA 176 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV+ ++ KS +K S + +MQ +DS+Y FV +V+ Sbjct: 177 SNLNYSGLLEKLGVTDQTYKSGALKDMNSSVRPATDEDKAVMQAYIDSAYGRFVDVVANG 236 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 RN+ D L+DGRI+ G++A K GL+D +G Q++ +L ++ + Sbjct: 237 RNLSVDAVKTLADGRIYDGSQAVKNGLVDEIGYQDDTLAALKKDNKLENAEVFEY 291 >gi|285019630|ref|YP_003377341.1| periplasmic serine protease [Xanthomonas albilineans GPE PC73] gi|283474848|emb|CBA17347.1| putative periplasmic serine protease protein [Xanthomonas albilineans] Length = 630 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 14/258 (5%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 D P VA + G+I ++ ++ + + DD+ A+++ + SPGG +A Sbjct: 329 DARPQVAVVVAAGEISAGEQPAGRIGGESTVQLLRQAREDDAVKAVVLRVDSPGGEVFAS 388 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R + +K KPV+ + + AAS GY IS +++ I A +++ GSIG+ P + Sbjct: 389 EQIRREVVALKAAGKPVVVSMGDYAASGGYWISMSADRIYADPSTITGSIGIFGMVPNIA 448 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK+GV V ++ ++P Q++Q ++ Y F V+++R + Sbjct: 449 RALDKIGVHTDGVGTTRYAGAFDISRPMDPIVGQLIQSAINKGYADFTGKVAQARGKSVE 508 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQE---EVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ GR+W+GA+AK+ GL+D GG + + LG R ++ P + + Sbjct: 509 AIDQVARGRVWSGAQAKERGLVDAFGGFKDAVADAAARAKLGGQDKYR-VRYIEKPASPF 567 Query: 260 FCDLKNLSISSLLEDTIP 277 + + S + + Sbjct: 568 AQFVNGFAGSRMGVWMLG 585 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 24/213 (11%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 ++L+ IE D + + L P G A + A++ +++ K ++ + Sbjct: 99 RDLVRAIEAAKTDPKIERVALRLDKLQPSGFAS-MREVAAALEDLRSSGKQIVAYSDTLN 157 Query: 108 ASAGYLISCASNIIVAAETSLVGS-----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 S YL++ +N + GS +G QY + DKLGV + K K+ Sbjct: 158 QS-QYLLAAQANEVYLDPM---GSMVLEGLGHYRQYF-RQGLQDKLGVDVHLFKVGEYKS 212 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT----LVLSDGRIWTGA 216 P+ +P A + ++ + ++ ++++R + + + +G + G Sbjct: 213 AAEPYVLDAASPAAKEADLFWMNDVWQRYLADIAKARKLSPVQISAGIDSMPEGIVAAGG 272 Query: 217 E----AKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + A + L+D + ++EV Q L GV + Sbjct: 273 DMAKFALQQKLVDGLKTRDEVEQLLAKRGVADA 305 >gi|149175995|ref|ZP_01854612.1| SppA [Planctomyces maris DSM 8797] gi|148845149|gb|EDL59495.1| SppA [Planctomyces maris DSM 8797] Length = 343 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 129/265 (48%), Gaps = 12/265 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + + S +A I+I G I ++ ++E I+ D +++ + SPGG Sbjct: 65 FETGDQFASDKIAIISITGTIMPPFTERILESIKTAHEDKQVKGILLEIDSPGGLVADSH 124 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI---IVAAETSLVGSIGVLFQYPYV 141 I+ + +++ +KP++ + MAAS GY ++ + I A T+ GS+GV+ + Sbjct: 125 QIYHRLVELRKKKPIVVSMKRMAASGGYYVAMGAGEEGVIFAEPTTWTGSLGVIIPRFDL 184 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IP 200 +K+GV +K+ K +PF E+ + + ++D SY F+ +++++R + Sbjct: 185 SGLAEKVGVVSDPLKTGEFKDALNPFREMTQRERDIWDHILDESYQRFLNIITDNRKDLD 244 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 Y++ L+ G+I+ +A++ GLID +G QE+ L + + +R I+ +P Sbjct: 245 YEQVKKLATGQIYPATDARENGLIDEIGYQEDALARLQEMTNLKKVRVIRYRHP------ 298 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQ 285 L ++ + S + KQ + Sbjct: 299 VTLADILLGSAEASQVENRKQALLD 323 >gi|294614153|ref|ZP_06694074.1| periplasmic serine protease [Enterococcus faecium E1636] gi|291593003|gb|EFF24591.1| periplasmic serine protease [Enterococcus faecium E1636] Length = 341 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 25/267 (9%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++ + G I + + +E+++ + D + + + ++SPGG Sbjct: 55 GDSTQKIVKLTVDGTIAAGGSSGLFASEGYNHENFMEQLKAVEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVIM 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K + ++Q +DS+Y FVR+VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGLGTRPETKEEEAVLQAYIDSAYQRFVRIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK------ 250 RN + ++DGRI+ G +AK+VGL+D +G E+ Q++ + ++ Sbjct: 235 RNKSEEAVKKIADGRIYDGVQAKEVGLVDELGFPEDALQAMRKEQKLEDAELVEYSSASS 294 Query: 251 ----DWNPPKNYWFCDLKNLSISSLLE 273 W K F LK+ S +L Sbjct: 295 GFASTWLGSKLAEFQGLKSSETSQILS 321 >gi|124003560|ref|ZP_01688409.1| signal peptide peptidase SppA, 67K type [Microscilla marina ATCC 23134] gi|123991129|gb|EAY30581.1| signal peptide peptidase SppA, 67K type [Microscilla marina ATCC 23134] Length = 573 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 10/216 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPG 77 W + ++ +A I G+I + ++++ + R + S A+++ ++SPG Sbjct: 278 WEKQQKKSNHRIAVIVADGEIRSGNGRDGIVGAAKIVKALRRARKSKSVKAIVLRVNSPG 337 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA A + ++R I + KPVI + ++AAS GY I+ A + IVA ++ GSIG+ Sbjct: 338 GSALASDIMWREIHLTRKVKPVIASMSDVAASGGYYIAMACDTIVAQPNTITGSIGIFSI 397 Query: 138 YPYVKPFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Y + F KLG++ V + A P Q++Q ++ Y F ++ Sbjct: 398 YFNLAAFQKNKLGITNDYVNTGKFSALGDPSYPFTEADRQILQRSIERGYESFTSKAAKD 457 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 R + + ++ GR+W G EAK+ GL+DV+G + Sbjct: 458 RGMSLAELKSVASGRVWAGNEAKQNGLVDVLGSFND 493 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 100/263 (38%), Gaps = 31/263 (11%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ----------------------EL 53 ++ S SS + + V + + G I + + Sbjct: 5 LVIFFIFTLVSSSSTITTDQKSVLLLKLNGNITELDIDNPVPSLDNPLNPVVDGTGLMGI 64 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 + IE+ D + +++ L S G + + + A+ K K + E + Y Sbjct: 65 LHNIEKAKNDPNIAGIVLHLQSIGAGFASLKELREALNDFKQSKKFVWAYGEYLSEGAYY 124 Query: 114 ISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 ++ +N I GS+ G+ Q + K DKL + + + K+ P+ Sbjct: 125 LTSVANKIYLNP---TGSLEFNGLSAQRTFYKGAFDKLDIKPEIFRVGTYKSAVEPYMTD 181 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVV 227 +++ + + + ++S Y +++ ++ SR + + SD G + + A+A K LI + Sbjct: 182 KMSEASRRQTESYLNSIYDLYLKDIATSRKVSLARLTQASDSGLVQSPADALKYQLITKI 241 Query: 228 GGQEEVWQSLYALGVDQSIRKIK 250 G +E+ + +KIK Sbjct: 242 GYYDELEAEVKQRLDLNENQKIK 264 >gi|158425341|ref|YP_001526633.1| peptidase S49 protein [Azorhizobium caulinodans ORS 571] gi|158332230|dbj|BAF89715.1| peptidase S49 protein [Azorhizobium caulinodans ORS 571] Length = 323 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 14/272 (5%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +SPHVAR+ I G I + ++ ++ +E I R +A A+IVS+ SPGG+ E ++ A++++ Sbjct: 48 SSPHVARVVIGGIIRNDRDRVKMLEEIGR-SNARAVIVSIDSPGGTVTGAEQLYDALRQL 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+ V MAAS GY+ + S+ IV+ ++VGSIGV+FQ+P V L K+GV+++ Sbjct: 107 AAKKPVVAVVEGMAASGGYIAAIGSDHIVSRRNAMVGSIGVIFQFPNVTDLLGKIGVTVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 +KSSP+KA P+ + +P+A + +V SY WF LVSE R + + +SDGR++ Sbjct: 167 DIKSSPLKAAPNGYQPTSPEARAAINSLVVDSYGWFKGLVSERRKLSDARLAEVSDGRVF 226 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK-------------NYWF 260 TG + + L+D +G + L +++ W Sbjct: 227 TGHQGLALQLVDELGDERTARAWLAREKGVPENLRVRTWKSESMGSEFGWLRGAAGALAS 286 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + L + T ++ ++ GL A+W Sbjct: 287 ALGFDTVAGILSQATQAAFEKAQLDGLLALWQ 318 >gi|148264257|ref|YP_001230963.1| signal peptide peptidase SppA, 36K type [Geobacter uraniireducens Rf4] gi|146397757|gb|ABQ26390.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Geobacter uraniireducens Rf4] Length = 323 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 21/283 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPGG 78 + P + + I G I + + E+ E +++ +DD +IV ++SPGG Sbjct: 41 GEGKPKLLLLDISGIITEKEKGGRLKQKPSMVAEVKEALQKAEKDDDIAGVIVRINSPGG 100 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 + A + I + K RK PV + + AS GY ++ A++ I A T++ GSIGVL Sbjct: 101 TVTASDIIHHELLAFKARKKVPVYACIMGIGASGGYYVATAADEISAHPTAVTGSIGVLL 160 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ L K+GVS +VKS K SPF P+ +++QDV++ + FV +V Sbjct: 161 MRFEVEGLLTKIGVSEHTVKSGDKKDMLSPFRPATPEEEKIIQDVINRLFGRFVDVVQAR 220 Query: 197 RNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + + +L+DGRI+T +A + LID +G ++ ++ G + R I + P Sbjct: 221 PGNKLERKELEILADGRIYTAEQALQAKLIDRIGYLDDTVSAVKKAGNIEQARVISYYRP 280 Query: 255 PK----NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 Y SL+ ++ G +W P Sbjct: 281 GSYRGTIYSGEADAANQALSLISINGDGLEMLSDAGFMYLWKP 323 >gi|260060602|ref|YP_003193682.1| protease IV [Robiginitalea biformata HTCC2501] gi|88784732|gb|EAR15901.1| protease IV [Robiginitalea biformata HTCC2501] Length = 584 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 119/226 (52%), Gaps = 9/226 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A + +G+I + + E +++ D+ A+++ ++SPGGSA Sbjct: 296 TGDSRIAIVYAQGEIFYGEGGPDYIGQVRMQEVFKKVREDEDIKAVVLRINSPGGSALTS 355 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I+R I + + KPV+ + ++AAS GY ++ A + IV T++ GSIGV P + Sbjct: 356 EIIWREIMETRKEKPVVVSLSDVAASGGYYMAVAGDRIVTEPTTITGSIGVFATIPNISS 415 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +K+G++ + V + M + S F + +++++ ++ +Y F++ V++ R I + Sbjct: 416 LSEKIGINAEQVGTHDMSVDYSFFEPMGDDFREVVREGIEDTYETFLQRVADGRGISVAQ 475 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 L+ GR+W+G +A ++GL D +GG E + L +S R + Sbjct: 476 ADSLAQGRVWSGTDAVRLGLADALGGMPEALDTAAELAGVESYRTL 521 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 17/214 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQKVKNRKPVITEVHE 105 E+ + I + DD + + + GG AI +A+ + + + + Sbjct: 77 DEITKAIRLAAGDDRISGISL-----GGPYLLAGITQTRAIRQALAEFRETGKFVYAYGD 131 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y +S ++ + V G+ + Y K F +K G+ ++ V+ K+ Sbjct: 132 FYMQKDYYLSSVADSVFLNPVGTVDFKGLAAEVLYFKEFQEKTGLQMEVVRHGKYKSAVE 191 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGAEAKKVG 222 PF ++ + +++++ S + +S SR + D+ ++DG + T A G Sbjct: 192 PFLSDSMSDDNREQLRELLASIWSSIREEISTSRGLSVDELDRIADGLLARTPERAVTTG 251 Query: 223 LIDVV---GGQEEVWQSLYALG-VDQSIRKIKDW 252 L+D + G +++ G D I ++D+ Sbjct: 252 LVDALIYRGEYDDLLARASGRGEDDPKIVTLQDY 285 >gi|329118386|ref|ZP_08247092.1| signal peptide peptidase SppA [Neisseria bacilliformis ATCC BAA-1200] gi|327465432|gb|EGF11711.1| signal peptide peptidase SppA [Neisseria bacilliformis ATCC BAA-1200] Length = 352 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 15/264 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 N H A I + G I + L + +E D + +I+ +SPGGS Sbjct: 94 AKNKEHTAVIKLNGVIGGGYQDQVALLRDGLEAAYADKNVKGIIIRANSPGGSPVVSNTA 153 Query: 87 FRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 F I+++K + P+ +M AS Y I+ A++ I A +SLVGSIGV+ Sbjct: 154 FNEIRRLKEQHKDIPLYLVAEDMCASGCYYIAAAADKIYADPSSLVGSIGVIGGSFDFTG 213 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 +DKLG+ + + K PFS P+ + Q ++D + F+ V R Sbjct: 214 IMDKLGIKRRLRTAGSNKGMGDPFSPETPEQTAIWQQMLDDIHGEFINAVKTGRGSRLKT 273 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + GRI+TG EA+K GLID G V + + D+ P ++ Sbjct: 274 NDPQIFSGRIYTGLEAQKNGLIDGFGNIYSVARD------QIKAPDLVDYTPDEDDLARA 327 Query: 263 LKNLSISSLLEDTIPLMKQTKVQG 286 + S + ++ +G Sbjct: 328 ISRRLNSEVQNQVRQSLENLDTKG 351 >gi|163748928|ref|ZP_02156179.1| signal peptide peptidase SppA, 67K type [Shewanella benthica KT99] gi|161331304|gb|EDQ02192.1| signal peptide peptidase SppA, 67K type [Shewanella benthica KT99] Length = 615 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 13/255 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I +G I + + + + + DD A+++ + SPGGSA+A E Sbjct: 326 EDTVGIIVAKGTILNGNQPAGQIGGESTSQLLRKARFDDKIKAVVLRVDSPGGSAFASEQ 385 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + AAS GY IS +++ I A T+L GSIG+ + Sbjct: 386 IRQEVLALKTAGKPVVVSMGSYAASGGYWISASADYIYATPTTLTGSIGIFGMITTFEDS 445 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ V +S S + P+ ++Q ++ YH F+ LV++ R++ + Sbjct: 446 LSSLGIHTDGVATSQWAGI-SVAKGLTPEIKSVIQRHIERGYHDFISLVAKERDMSLEDV 504 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK--IKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GLID +G ++ + I+ PK + + Sbjct: 505 DAIAQGRVWSGRKALELGLIDELGDLDDAVAKAAEMADLAEFDSQIIEQELSPKELFIQE 564 Query: 263 LKNLSISSLLEDTIP 277 + + + L + ++ Sbjct: 565 MFASAAAYLPQSSMG 579 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 119/324 (36%), Gaps = 61/324 (18%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------- 51 + VL + ++ + +V + V V+ S + + G I + + Sbjct: 24 KLVLNLLFFGFLAIIIVAVAV---GIDDDVQLESGSALVLDLAGSIVEQKRQVDPIEAAM 80 Query: 52 ---------------ELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQ 91 +++ I+ + D+ +A+++ + G ++I A+ Sbjct: 81 KSSKNSHGNGEILLADILNVIDNAAADERISAIVLDI----GHLRWTGISKLQSIGDALT 136 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDK 147 + K KP++ + + Y ++ ++ I GS+ G+ Y K LDK Sbjct: 137 RFKATGKPILATANWYGQN-QYFLASFADTIYLNPQ---GSVELNGLSRYRQYYKSALDK 192 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT- 204 L ++ + K+ P+ +++P A + ++++ + + VS +R+I ++ Sbjct: 193 LKINAHVFRVGTFKSAVEPYIRDDMSPAAKEANIELLNDIWASYAATVSSNRDIKPEQLV 252 Query: 205 ---------LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 L +DG+ + A + +D + E L + + + Sbjct: 253 LDAEDYLRELDKADGK--SADMAINMHWVDELASAEAF--RLEMIDTVGKAAEGNSYKQV 308 Query: 256 KNYWFCDLKNLSISSLLEDTIPLM 279 Y + L + +EDT+ ++ Sbjct: 309 SLYDYQSLMSTQADLFIEDTVGII 332 >gi|330446548|ref|ZP_08310200.1| signal peptide peptidase SppA, 67K type [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490739|dbj|GAA04697.1| signal peptide peptidase SppA, 67K type [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 587 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 17/260 (6%) Query: 22 VVYFSWSSHV----EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATA 68 + Y+ + S + E + VA + G I D + + + D + Sbjct: 278 ISYYDYLSMLVDDQEPSKNKVAVVVASGAIVDGKSSQGTAGGDTIAGLLRKARFDKDVKS 337 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +I+ + SPGGSA+A E I + +K KPV+ + +AAS GY IS +++ I+A T+ Sbjct: 338 VILRVDSPGGSAFASEVIRNEVDALKEAGKPVVVSMSSVAASGGYWISSSASKIIAQPTT 397 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GSIG+ + L+KLGV V ++P + ++ Q VD+ Y Sbjct: 398 ITGSIGIFAILTTFEKSLEKLGVYSDGVGTTPFAGVG-VTRALPENIAKIFQMGVDNGYQ 456 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F+ LVS+ R++ ++ ++ GR+WTG +AK GL+D +G + AL + + Sbjct: 457 RFIGLVSKYRHMSLEQADKIAQGRVWTGKDAKARGLVDELGDFDTAITEAVALAKVDNYQ 516 Query: 248 KIKDWNP--PKNYWFCDLKN 265 + P P +F ++ Sbjct: 517 LVWMQQPLSPIQQFFKEMSG 536 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 108/290 (37%), Gaps = 58/290 (20%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVA---RIAIRGQIEDSQ------------------- 51 M+ LV + + F+++S E A + + G I + + Sbjct: 1 MIFLVIVGAIIFAFNSDDESADKPEASALMLDLSGPIVEQKNYDNPLDGIVSNVMGQPPV 60 Query: 52 ------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 +++E I + D S T L+++L + P S I +AIQ+ K KPV Sbjct: 61 EQNVLFDIVEAIRTAATDSSITGLVLNLKNMPETSLTKLRYIAKAIQEFKASGKPVYAYG 120 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVKSS 158 + S Y ++ ++ + + GV+ Y K L+KL V+ + Sbjct: 121 GHYSQS-QYYLASYADKVFMSPDG-----GVMLTGYGTYTLYYKSLLEKLDVTTHVFRVG 174 Query: 159 PMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD------- 209 K+ P+ ++ A + +D + + V+++RNI +D Sbjct: 175 TYKSFVEPYIRDGMSAAAKEANTVWLDQLWGAYTSDVAKNRNIDAATLTPETDNFIEQLT 234 Query: 210 ---GRIWTGAEAKKVGLIDVVGG---QEEVWQSLYALGVDQSIRKIKDWN 253 G +KK+GL+D + ++ + + S ++I ++ Sbjct: 235 AVKGDF--AQLSKKMGLVDELVTRPQLSQILIKAFGDNGEHSFKQISYYD 282 >gi|215444849|ref|ZP_03431601.1| protease IV [Mycobacterium tuberculosis T85] gi|289568669|ref|ZP_06448896.1| protease IV sppA [Mycobacterium tuberculosis T17] gi|289542423|gb|EFD46071.1| protease IV sppA [Mycobacterium tuberculosis T17] Length = 458 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 163 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 222 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 223 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 282 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 283 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 342 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 343 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 402 Query: 257 NYWFCDLK----NLSISSLLEDTIPLMKQTKVQGLW 288 + + ++ + ++ L D + + + G+ Sbjct: 403 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 438 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 9/139 (6%) Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYH 187 G +G +++ L K G+ + V K+ + F+E + + ++DS Sbjct: 2 GLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTEDGFTDAHREAVTRMLDSLQD 61 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSI 246 + V++SRNI D L+D +A GLID +G +++ + + L GV++ Sbjct: 62 QVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLIDRIGFRDQAYARMAELVGVEKGS 121 Query: 247 RK------IKDWNPPKNYW 259 + D PP+ Y Sbjct: 122 PESSGSQTSPDEKPPRMYL 140 >gi|225012275|ref|ZP_03702712.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-2A] gi|225003830|gb|EEG41803.1| signal peptide peptidase SppA, 67K type [Flavobacteria bacterium MS024-2A] Length = 588 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 22/285 (7%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATA 68 V++ V + S+ +A + RG I + +E ++ ++ D+ A Sbjct: 287 VSVVDVNNASSTFDSSLKDRIAIVFARGPIMYGEGTKNMIAQGVFVETLKELAEDEWIKA 346 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + SPGG+A + ++RAI+K+K +KPV+ + +AAS GY I+ ++ I A ++ Sbjct: 347 VVIRVESPGGNALTSDLLWRAIEKLKTKKPVLVSMGNVAASGGYYIAAGADQIFADPLTI 406 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV P + +K+G+ ++V++ S F + ++++Y+ Sbjct: 407 TGSIGVFASLPNIYGMTEKIGIHAETVETHQNALGYSFFQPLTESFKIRTIKSIENTYNT 466 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F + V + R + + L+ GR+W+G +A VGL+D +GG ++ ++ + Sbjct: 467 FKQRVIKGRGLTSETVEALAQGRVWSGKQALSVGLVDHLGGLQDAIEAAA------EVAN 520 Query: 249 IKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 I+++N F + +S + PL K T W W P Sbjct: 521 IENYNTIDYPKFEEDLESILSGAIPS--PLSKAT-----WMHWVP 558 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 98/270 (36%), Gaps = 30/270 (11%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------------- 51 + V+L + + + + S V + + I D Sbjct: 20 LFFVIVLLFISGIASIMSAPSGGNSIKQNSVLALDLNLPIVDRAPSFDELQILLGLEDKV 79 Query: 52 ----ELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 ++I I++ S + + + + S G +I A+ + K I + Sbjct: 80 LGLPDIISAIDKASENQNIKGIRLRADFISAG--WAQTRSIRNALSRFKESGKFIYAYAD 137 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + GY ++ S+ I ++ G+ + Y K F D+ GV ++ ++ K+ Sbjct: 138 VFTQKGYYLASISDSIYLNPVGILEFKGLASEVLYYKDFQDEYGVKMEVIRHGKYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVG 222 P+ +E++ ++ ++D + +++ RN+ + + RI + + Sbjct: 198 PYLENEMSSDNRYQIKTLLDDIWETIREEIAQERNLDPKILDKIINNQRITIPEDGVQEH 257 Query: 223 LIDVV---GGQEEVWQSLYALGVDQSIRKI 249 LID + +E + + D+ + ++ Sbjct: 258 LIDALVYEDDFDEKIKMQLEISTDEDLNRV 287 >gi|332971011|gb|EGK09983.1| signal peptide peptidase SppA [Psychrobacter sp. 1501(2011)] Length = 357 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 18/268 (6%) Query: 29 SHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 S + +PH+A + I G I ++ ++ + + A++++++SPGGS Sbjct: 91 STADVTTPHLAVVDIEGVISADDPANAYDVSAALTEAFESKGSKAVVLNINSPGGSPVQS 150 Query: 84 EAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I++ + ++ + P + + +M AS Y I+ A++ I +SLVGSIGV+ Sbjct: 151 DQIWQTMMDLRKQHPDKKLYAVIGDMGASGAYYIASAADEIYVNPSSLVGSIGVIMPGYN 210 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V+ + K GV ++ + K S +++ Q ++ V+++++ F+ V + R Sbjct: 211 VEGLMKKAGVKDTTMTAGEYKDILSISRDLSDYEKQHIESVLNNTHKHFINAVKQGRGDR 270 Query: 201 YDKTL--VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L G WTG +A +GL D G L L + + + ++ P Sbjct: 271 LKDPEKNKLFTGLFWTGEQAIALGLADKKGS-------LMTLEKELKVDDVINYTPADPL 323 Query: 259 -WFCDLKNLSISSLLEDTIPLMKQTKVQ 285 F + + S + ++ L + Q Sbjct: 324 QMFLSNFAVQLGSGIGSSVELKLLPEEQ 351 >gi|91775677|ref|YP_545433.1| peptidase S49 [Methylobacillus flagellatus KT] gi|91709664|gb|ABE49592.1| peptidase S49 [Methylobacillus flagellatus KT] Length = 312 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 11/240 (4%) Query: 11 RYVMLSLVTLTVVYF---SWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISR 62 + L + L ++ F W+ + H A I I G I ++ +I ++ Sbjct: 36 FFKSLGFLYLFIILFYITGWNEGRSASMEHTALIDIDGVIGSDDVVNADSVIASLKSAYE 95 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASN 119 +I+ ++SPGGS I I++ + P+ V ++ AS GY I+ A++ Sbjct: 96 SKGTKGIILRINSPGGSPVQAGIINDEIKRQRKLHPNIPIYAVVQDVCASGGYYIAVAAD 155 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I + S+VGSIGVL +DK+GV + + + K PFS V+PK + Q Sbjct: 156 KIFVDKASIVGSIGVLMDGFGFTGAMDKVGVERRLMTAGENKGMLDPFSPVSPKHREFAQ 215 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ +V E R +T G W+G + +GL D G + V + + Sbjct: 216 QMLDQIHAQFIAVVREGRGKRLKETPETFSGLFWSGESSVAMGLADGFGSSDYVAREVIK 275 >gi|255536295|ref|YP_003096666.1| putative protease IV [Flavobacteriaceae bacterium 3519-10] gi|255342491|gb|ACU08604.1| putative protease IV [Flavobacteriaceae bacterium 3519-10] Length = 584 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 130/260 (50%), Gaps = 18/260 (6%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--------SQELIERIERISRDDSATAL 69 ++ S+ +A + G I S++LI+ I+++++++ + Sbjct: 285 ISFNKYIGSYKEDNIKKDNQIAVLYASGAIYSGEGIDGIYSEDLIKEIKKLTKNEKVKGV 344 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++ ++SPGGSA A + I +Q++K +KP+I + AAS GY I+ A++ I A +L Sbjct: 345 VLRINSPGGSANASDEILFELQQLKAKKPLIVSFGDYAASGGYYIAMAADRIYAEPNTLT 404 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV +PY K +K G+S SV ++ S + + P +MQ V+ +Y F Sbjct: 405 GSIGVFGVFPYFKEIANKNGLSAHSVNTNANSNMFSTINGITPGGAAVMQKSVEMTYKRF 464 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V V+++RN + + + GR+W+G AK++GL+D +G + + K+ Sbjct: 465 VHFVTQNRNRSFAQIDEIGGGRVWSGIRAKQIGLVDEIGNLNDAVKFAA------QQAKL 518 Query: 250 KDWN----PPKNYWFCDLKN 265 KD+N P K F L Sbjct: 519 KDYNVASYPKKVSQFEQLFK 538 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 84/221 (38%), Gaps = 28/221 (12%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------------- 50 + ++M ++ + + S+ + V + + I DS Sbjct: 18 LGGFFIMFVILMVAYSAITDSNKSAIPNNSVLTLDFKTNIIDSPLEDSDKIFDFAEKQNN 77 Query: 51 ---QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEVH 104 +++E I++ DD + + S G + I A+Q + K V + Sbjct: 78 IMVYDMVEAIQKAETDDKIKGISIETDGLSAG--MTQIDNIRTALQNFRKSGKFVYAYGN 135 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++ SA Y + ++ + G+ + Y+K F +K G+ I+ ++ K+ Sbjct: 136 TVSQSA-YYLGSVADRYYLNPAGGIDLKGLSTEVLYLKSFAEKFGIGIEVIRHGKYKSAV 194 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 PF +++P+ + + ++ + R ++ SR + + Sbjct: 195 EPFLRDDMSPENKEQLSTLLTDLWMPTARNIASSRKMDTAQ 235 >gi|163791443|ref|ZP_02185852.1| hypothetical protein CAT7_03184 [Carnobacterium sp. AT7] gi|159873307|gb|EDP67402.1| hypothetical protein CAT7_03184 [Carnobacterium sp. AT7] Length = 345 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 15/240 (6%) Query: 30 HVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSP 76 D+S + +++ G I D ++++E+I DD+ +I+S++SP Sbjct: 58 DAGDSSKRIVVLSVDGTILAGQTASFTGDSGYDHNGFLQQLEQILVDDTIKGIILSVNSP 117 Query: 77 GGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG Y I + ++ K +KP+ + MAAS GY IS + I AAE +L GSIGV Sbjct: 118 GGGTYESAQIKDKLVEIQEKTKKPIYVSMGSMAASGGYYISAPAEKIFAAEETLTGSIGV 177 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + +K+G+ ++KS K S E+ + ++Q +V++S+ FV ++ Sbjct: 178 IMSGTNLTELFEKIGIDDTTIKSGKFKDIGSTTREMTEEDAAILQTMVNTSFDRFVDVIV 237 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + R + D ++DGRI+ GA+A ++GL+D +G QE+ +++ + P Sbjct: 238 KGRGMDEDVVRTIADGRIYDGAQAVELGLVDEIGYQEDALETIQKDYKLEDAEIFSYQTP 297 >gi|78485488|ref|YP_391413.1| peptidase S49 [Thiomicrospira crunogena XCL-2] gi|78363774|gb|ABB41739.1| S49 peptidase family protein [Thiomicrospira crunogena XCL-2] Length = 312 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 16/278 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVY--FSWSSHVEDNSPHVARIAIRGQIE-----DSQELIER 56 +K ++ +VTL ++ F+ V S HVA + + G I ++ L Sbjct: 30 WTNLLKLSVILYIIVTLVMLASQFTSEEDVLSGSKHVAVVKLEGAIMPGSRTSAETLNPL 89 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLI 114 + ++ ++ A+I+ +SPGGS I I ++K KPV V ++ AS Y I Sbjct: 90 LNSAFKNPNSQAVIIKANSPGGSPVQSALINDEITRLKTLYNKPVYVVVEDLCASGCYYI 149 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I A + S++GSIGV V ++K+G+ +S+ + KA PFS + Sbjct: 150 AVAADKIYANKGSIIGSIGVRMDTFGVTGLMEKMGIENRSMHAGEHKAFIDPFSPKDESG 209 Query: 175 VQMMQDVV-DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q Q+ + + ++ F+ V + R + G +W G EA K G+ID +G V Sbjct: 210 RQFFQERILERTHQQFIEAVRKGRGDRIKENENTYTGLVWLGDEAVKNGMIDGLGDIGYV 269 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + + + + K + + ++S + Sbjct: 270 KREII------KQTNTRHYEAEKTFMEQLMGDISSETA 301 >gi|171057279|ref|YP_001789628.1| peptidase S49 [Leptothrix cholodnii SP-6] gi|170774724|gb|ACB32863.1| peptidase S49 [Leptothrix cholodnii SP-6] Length = 340 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 13/231 (5%) Query: 34 NSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N PH A + +RG+I + L+ + D A A+++ ++SPGGS I Sbjct: 88 NGPHTALVELRGEIAVDTEASADVLLSGLRSAFEDSGAQAVVIRINSPGGSPVQAGIIHD 147 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I ++K + K V V E AS Y ++ A++ I + S+VGSIGVL ++ Sbjct: 148 EILRLKAKHDKEVYAVVEESCASGAYYVAVAADSIYVDKASIVGSIGVLMDGFGFTSLME 207 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + + + K PFS ++ Q ++D + F+++V + R +T Sbjct: 208 KLGVERRMITAGSNKGMLDPFSPLSESQRAFAQSMLDQIHQQFIKVVKDGRGERLKETPE 267 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 G W+G EA + GL D G E V + + ++ D+ P +N Sbjct: 268 TFSGLFWSGEEAVRQGLADGFGNLEFVAREIV------KAEEVIDYTPHEN 312 >gi|219556574|ref|ZP_03535650.1| protease IV [Mycobacterium tuberculosis T17] Length = 463 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 168 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 227 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 228 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 287 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 288 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 347 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 348 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 407 Query: 257 NYWFCDLK----NLSISSLLEDTIPLMKQTKVQGLW 288 + + ++ + ++ L D + + + G+ Sbjct: 408 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 443 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 12/142 (8%) Query: 130 GSIGVLFQYPYVK---PFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDS 184 GS+G++ L K G+ + V K+ + F+E + + ++DS Sbjct: 4 GSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLFTEDGFTDAHREAVTRMLDS 63 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVD 243 + V++SRNI D L+D +A GLID +G +++ + + L GV+ Sbjct: 64 LQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLIDRIGFRDQAYARMAELVGVE 123 Query: 244 QSIRK------IKDWNPPKNYW 259 + + D PP+ Y Sbjct: 124 KGSPESSGSQTSPDEKPPRMYL 145 >gi|300728472|ref|ZP_07061832.1| signal peptide peptidase SppA, 67K type [Prevotella bryantii B14] gi|299774273|gb|EFI70905.1| signal peptide peptidase SppA, 67K type [Prevotella bryantii B14] Length = 593 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 20/278 (7%) Query: 32 EDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGG 78 ED +A G I D + ++ + +E ++ DD A+++ ++S GG Sbjct: 297 EDKGDKIALYYCEGSIIDKANSLNNNEPQIVASKVCKDLEDMANDDRIKAVVLRINSGGG 356 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 AYA E I+ ++K+ +KPV+ + MAAS Y +S + IVA T+ GSIG+ Sbjct: 357 DAYASEQIWHYVKKLNAQKPVVVSMSGMAASGAYYMSMGARWIVAQPTTETGSIGIFAAI 416 Query: 139 PYVKPFL-DKLGVSIKSVKSSPMK--AEPSPF---SEVNPKAVQMMQDVVDSSYHWFVRL 192 P + KLG+ + ++ + +P N + +Q VD Y F + Sbjct: 417 PDFSGLMTQKLGIKFDEIGTNKNSTFSMNNPIPMARPYNEDEAKALQRYVDRGYDLFCQR 476 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++ R + ++ ++ G ++ G +A K+ L+D +G ++ Q + ++ + D+ Sbjct: 477 VADGRKLSVNQVHEVAQGHVFLGTDAIKLKLVDQLGSMDDAIQKAASFAKLKNYYTV-DY 535 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 + P N+ L S+ L++ + L + Sbjct: 536 SQPTNWIDQLLGITEDSNSLDEQLRLALGEYYTPFMML 573 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 95/274 (34%), Gaps = 32/274 (11%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------- 50 + + L++L + S S+ V + ++G I + Sbjct: 15 IFLFGSLIGFFGLISLIGMISSKSAGTTLQDNSVLVLKLQGIINEQASDNFIGQITGHQI 74 Query: 51 -----QELIERIERISRDDSATALIVSLSSPGGSA--YAGEAIFRAIQKVKNRKPVITEV 103 E++ I++ D + L S SA + I A+Q + I Sbjct: 75 NQIGMNEMMSAIKKAKNDKHIQGI--YLESGFLSADWATVQEIRGALQDFRKSGKWIIAY 132 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 E Y IS A+N + ++ G+ Q Y K K GV + K K+ Sbjct: 133 GERFNQPTYYISTAANKVYLNPEGMIDWHGIAAQPEYYKDLFAKFGVRFQIFKVGKYKSY 192 Query: 164 PSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT---GAEA 218 F+E ++ + M +++ + VS+SR+I + +D I + G Sbjct: 193 TETFTEDKMSDANREQMSRIINGLWSEVCTQVSQSRHISTSQLNQYAD-EIVSLDGGKSL 251 Query: 219 KKVGLIDVVGGQEE---VWQSLYALGVDQSIRKI 249 K +D + +E V + L D I ++ Sbjct: 252 LKKNFVDGLLYADEIKSVVKKRLGLEDDDMIHQV 285 >gi|15839274|ref|NP_299962.1| protease IV [Xylella fastidiosa 9a5c] gi|9107924|gb|AAF85482.1|AE004074_6 protease IV [Xylella fastidiosa 9a5c] Length = 633 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 10/231 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVS 72 + S S +A + G+I + + + +D+ A+++ Sbjct: 320 LSLLDAQSVPLGTSSQIAVVVAAGEIKGGDQPAGYIGGESTSMLLRKARDEDAVKAVVLR 379 Query: 73 LSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGG +A E I R + ++ KPV+ + +MAAS GY IS ++ I A +++ GS Sbjct: 380 VNSPGGEVFASEQIRREVVALRKVGKPVVVSMGDMAASGGYWISMDADRIYADPSTISGS 439 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG+ P + LDK+GV V ++ ++P+ QM+Q+V+D Y F Sbjct: 440 IGIFGLMPNITRTLDKMGVHTDGVGTTRFAGALDITRTLDPQVGQMLQNVIDKGYADFTS 499 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 500 KVAQARHRSVQEIDSIARGRVWSGAQAKERGLVDELGGVREAITDAAKRAK 550 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 28/222 (12%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVK-NRKPV 99 GQ ++LI IE ++D +++ L P G YA + A+Q +K + K + Sbjct: 92 SGQEVQLRDLIRVIEAAAKDKKVERVLLDLDKLQPSG--YASLREVVAALQNLKGSGKQL 149 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYV-KPFLDKLGVSIKSV 155 + M S YL++ ++ I GS+ G+ Y K +KLGV + Sbjct: 150 VAFSESMTQS-QYLLAAQADEIYLDPM---GSVLLEGLAHYRQYFRKGLQEKLGVDVHLF 205 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---- 209 + K+ PF + A + ++ + ++ ++++R + + + Sbjct: 206 RVGEYKSAAEPFVLDAASADAKEADLFWMNDIWQRYLADIAKARKLDSAHLNTIVERLPQ 265 Query: 210 ------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 G A L+D + +E+V Q + GV Sbjct: 266 DIAANHGD--LAKYALAQKLVDGLKTREQVNQLMIQRGVADK 305 >gi|189182992|ref|YP_001936777.1| protease IV [Orientia tsutsugamushi str. Ikeda] gi|189179763|dbj|BAG39543.1| protease IV [Orientia tsutsugamushi str. Ikeda] Length = 302 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 150/289 (51%), Gaps = 13/289 (4%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVE-----DNSPHVARIAIRGQIEDSQELIERIERISRD 63 K + + L L+T VV F + + V ++A I I I D +L + +I D Sbjct: 20 KWKILTLLLITAIVVLFIFRNRVGYSPSLATGDYIANIQIDDLIYDDIKLNNLLHQIKND 79 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D A ALI+ + SPGG+ E I+ ++ + N KPV+ + +AAS GYL++ A++ I+A Sbjct: 80 DKAKALILHVDSPGGTVAGSEKIYGILRSISNSKPVVAVLGTVAASGGYLVALAADYIIA 139 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ++++ GSIG++ P + F +K+G+ + KS +KA PS +V P + +++ Sbjct: 140 QKSTVTGSIGIVHFSPEITEFGEKIGIKFHTFKSGELKAAPSLTEKVTPAVHEATMTLIN 199 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGV 242 Y +FV LV+E R + ++ L ++DG+ +TG +A + LID +G E+ L + Sbjct: 200 DMYDFFVELVAERRQMSPEQVLKVADGKAYTGRQALSLNLIDALGTTEDALTWLQQEKKL 259 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 +R I+ K + +L +I L +K+ G+ A++ Sbjct: 260 SLDLRVIELHTQTKLDSYIELFQNNIRKL-------FFGSKINGVMALY 301 >gi|15840132|ref|NP_335169.1| protease IV [Mycobacterium tuberculosis CDC1551] gi|308370480|ref|ZP_07421698.2| protease IV sppA [Mycobacterium tuberculosis SUMu003] gi|308373552|ref|ZP_07432816.2| protease IV sppA [Mycobacterium tuberculosis SUMu005] gi|308375233|ref|ZP_07443216.2| protease IV sppA [Mycobacterium tuberculosis SUMu007] gi|308376479|ref|ZP_07439007.2| protease IV sppA [Mycobacterium tuberculosis SUMu008] gi|308377499|ref|ZP_07479407.2| protease IV sppA [Mycobacterium tuberculosis SUMu009] gi|308378702|ref|ZP_07483598.2| protease IV sppA [Mycobacterium tuberculosis SUMu010] gi|308379848|ref|ZP_07487837.2| protease IV sppA [Mycobacterium tuberculosis SUMu011] gi|13880283|gb|AAK44983.1| protease IV [Mycobacterium tuberculosis CDC1551] gi|308331869|gb|EFP20720.1| protease IV sppA [Mycobacterium tuberculosis SUMu003] gi|308337113|gb|EFP25964.1| protease IV sppA [Mycobacterium tuberculosis SUMu005] gi|308347025|gb|EFP35876.1| protease IV sppA [Mycobacterium tuberculosis SUMu007] gi|308350909|gb|EFP39760.1| protease IV sppA [Mycobacterium tuberculosis SUMu008] gi|308355599|gb|EFP44450.1| protease IV sppA [Mycobacterium tuberculosis SUMu009] gi|308359558|gb|EFP48409.1| protease IV sppA [Mycobacterium tuberculosis SUMu010] gi|308363462|gb|EFP52313.1| protease IV sppA [Mycobacterium tuberculosis SUMu011] Length = 539 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P +A + + G I + + + ++ DDS +A+++ + SPG Sbjct: 244 SKPTIAVVTLEGPIVNGRGGPQFLPLGPSSAGGDTIAAALREVAADDSVSAIVLRVDSPG 303 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R + + ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 304 GSVTASETIWREVARARDRGKPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVIT 363 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV +V+++ S + P + D Y FV V+E Sbjct: 364 GKLVVRDLKDRLGVGSDAVRTNANADAWSIDAPFTPDQQAHREAEADLFYSDFVERVAEG 423 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + D V++ GR+WTGA+A GL+D +GG + L +++ + P Sbjct: 424 RKMTTDAVDVVARGRVWTGADALDRGLVDELGGLRTAVRRAKVLAGLDEDTEVRIVSYPG 483 Query: 257 NYWFCDLK----NLSISSLLEDTIPLMKQTKVQGLW 288 + + ++ + ++ L D + + + G+ Sbjct: 484 SSLWDMVRPRPSSRPAAASLPDAMGALLARSIVGIV 519 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 15/221 (6%) Query: 51 QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ + I R + D LI + SP G+ + + AI KP + Sbjct: 4 RDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAVKPSLAWAETYP 60 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ A + + VG +G +++ L K G+ + V K+ + F Sbjct: 61 GTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVARGEYKSAANLF 120 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +E + + ++DS + V++SRNI D L+D +A GLID Sbjct: 121 TEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLLRDDAVTCGLID 180 Query: 226 VVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +G +++ + + L GV++ + D PP+ Y Sbjct: 181 RIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 221 >gi|77166296|ref|YP_344821.1| peptidase S49, SppA [Nitrosococcus oceani ATCC 19707] gi|254435484|ref|ZP_05048991.1| peptidase, S49 (protease IV) family [Nitrosococcus oceani AFC27] gi|76884610|gb|ABA59291.1| Peptidase S49, SppA [Nitrosococcus oceani ATCC 19707] gi|207088595|gb|EDZ65867.1| peptidase, S49 (protease IV) family [Nitrosococcus oceani AFC27] Length = 325 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 16/249 (6%) Query: 35 SPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +PH A + I G I +++ + + ++ ++ LI+ ++SPGGS I Sbjct: 74 TPHTALVKIEGIIGSDSFANAENIKKGLKAAFENEHIAGLILHINSPGGSPVQANQINDQ 133 Query: 90 IQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I +++ P + + ++ AS GY I+ A++ I A + S+VGSIG L ++ Sbjct: 134 IHQLRKEHPNIPIHAVITDICASGGYYIAVAADQIYADKASIVGSIGALINSFGFVEAME 193 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ + + K PFS + Q +Q ++D+ + F+++V ++R Sbjct: 194 KLGIERRLFTAGDYKGFLDPFSPMKEFESQHIQKMLDNIHKQFIQVVKDNRGERLKNDSS 253 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLK 264 L G +WTG +A +GLID +G V + + KI D+ P F Sbjct: 254 LFSGLVWTGEQAIDLGLIDGLGNSNYVAREIIG------AEKIVDYTPQPKLLDRFSRQL 307 Query: 265 NLSISSLLE 273 + +++L Sbjct: 308 GATFANMLS 316 >gi|327394084|dbj|BAK11506.1| protease IV SppA [Pantoea ananatis AJ13355] Length = 624 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 12/271 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATAL 69 ++++ ++ ++A I G I D E +I D A+ Sbjct: 315 SVSIYDYNVKPDATQQKGNIAVIMASGAIMDGDETPGNVGGDTTAAQIRDARLDPKIKAI 374 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++SPGGS A EAI + K KP++ + MAAS GY IS ++ I+A+ ++L Sbjct: 375 ILRVNSPGGSVTASEAIRAELAAAKAAGKPIVVSMGGMAASGGYWISTPASYIIASPSTL 434 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ ++ L +GV V +SP+ S + P+ Q+MQ +++ YH Sbjct: 435 TGSIGIFGVINTLENSLASIGVHTDGVATSPLADVAS-TKALPPEVQQLMQLTIENGYHN 493 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIR 247 FV LV+ SR+ ++ ++ G +WTG++AK GL+D +G ++ + L V Q Sbjct: 494 FVGLVAASRHKTPEQIDAIAQGHVWTGSDAKANGLVDALGDFDDAVKKAAELAKVSQPQL 553 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 +P + N S+ ++L D I Sbjct: 554 DWYQEDPGFIDLMLNQMNASVQAVLPDPIKA 584 Score = 92.5 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 13/198 (6%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D + +++ L GG + + + +A+++ + KP+ + + + Sbjct: 104 DVVDAIRQAKDDSNIKGMVLDLRDFAGGDQPSLQYVGKALREFRESGKPIYA-LGDSYSQ 162 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ + I + V G Y K L+KL V+ + K+ PF Sbjct: 163 AQYYLASYATKIYLSPQGTVDLHGFATNGLYYKTLLEKLKVNSHVFRVGTYKSAVEPFLR 222 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A V + ++ VS +R I ++ + I TG A Sbjct: 223 DDMSPAARDADTRWVGQLWQNYLNTVSANRQITPEQLFPGATAIIAGLQAVKGDTGQYAL 282 Query: 220 KVGLIDVVGGQEEVWQSL 237 L+DV+G + + Q L Sbjct: 283 DNKLVDVLGSRADADQML 300 >gi|291617657|ref|YP_003520399.1| SppA [Pantoea ananatis LMG 20103] gi|291152687|gb|ADD77271.1| SppA [Pantoea ananatis LMG 20103] Length = 624 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 12/271 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATAL 69 ++++ ++ ++A I G I D E +I D A+ Sbjct: 315 SVSIYDYNVKPDATQQKGNIAVIMASGAIMDGDETPGNVGGDTTAAQIRDARLDPKIKAI 374 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++SPGGS A EAI + K KP++ + MAAS GY IS ++ I+A+ ++L Sbjct: 375 ILRVNSPGGSVTASEAIRAELAAAKAAGKPIVVSMGGMAASGGYWISTPASYIIASPSTL 434 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIG+ ++ L +GV V +SP+ S + P+ Q+MQ +++ YH Sbjct: 435 TGSIGIFGVINTLENSLASIGVHTDGVATSPLADVAS-TKALPPEVQQLMQLTIENGYHN 493 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIR 247 FV LV+ SR+ ++ ++ G +WTG++AK GL+D +G ++ + L V Q Sbjct: 494 FVGLVAASRHKTPEQIDAIAQGHVWTGSDAKANGLVDALGDFDDAVKKAAELAKVSQPQL 553 Query: 248 KIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 +P + N S+ ++L D I Sbjct: 554 DWYQEDPGFIDLMLNQMNASVQAVLPDPIKA 584 Score = 92.5 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 82/198 (41%), Gaps = 13/198 (6%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ I + D + +++ L GG + + + +A+++ + KP+ + + + Sbjct: 104 DVVDAIRQAKDDSNIKGMVLDLRDFAGGDQPSLQYVGKALREFRESGKPIYA-LGDSYSQ 162 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ + I + V G Y K L+KL V+ + K+ PF Sbjct: 163 AQYYLASYATKIYLSPQGTVDLHGFATNGLYYKTLLEKLKVNSHVFRVGTYKSAVEPFLR 222 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 +++P A V + ++ VS +R I ++ + I TG A Sbjct: 223 DDMSPAARDADTRWVGQLWQNYLNTVSANRQITPEQLFPGATAIIAGLQAVKGDTGQYAL 282 Query: 220 KVGLIDVVGGQEEVWQSL 237 L+DV+G + + Q L Sbjct: 283 DNKLVDVLGSRADADQML 300 >gi|302340483|ref|YP_003805689.1| signal peptide peptidase SppA, 36K type [Spirochaeta smaragdinae DSM 11293] gi|301637668|gb|ADK83095.1| signal peptide peptidase SppA, 36K type [Spirochaeta smaragdinae DSM 11293] Length = 791 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 25/270 (9%) Query: 37 HVARIAIRGQIEDSQEL----------IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A I + G I + + + I DDS A+++ ++S GG A ++I Sbjct: 503 TIAIINLTGNIHSGEGVPGESVGADTTVRSITLAREDDSIDAIVLRINSGGGGLLASDSI 562 Query: 87 FRAIQKV---KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 RA+ + +N KPV+ + MAAS Y I+ +N++ A ++ GSIGV+ P + Sbjct: 563 ARAVSRTVSGENAKPVVVSMGSMAASGAYYIAARANVVFAYPETMTGSIGVVAITPDISR 622 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L++ +++++VK SP SP+ + + + ++ ++ S Y FV V++ R++ + Sbjct: 623 LLEEHKIAVETVKQSPEADFGSPYRPLLAEEREKIKAMIASGYDHFVENVADGRDMKREN 682 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+W+G+ A++ GL+D +GG + + L Q ++ D+ P+ Sbjct: 683 VERIAQGRVWSGSAAQEKGLVDEIGGMDAAVKRAAELSGRQGAIELADYTIPERILRLPF 742 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 +P T GL +VW P Sbjct: 743 ------------LPPSLVTAYHGLGSVWLP 760 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 92/237 (38%), Gaps = 14/237 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +E I + ++ D +I P S + ++ + + + + A + Sbjct: 288 REHIRSLNELADDPLVDGIIFVNEHPASSLSVARELLVPLKHFREKGKKVMFYFDTADTD 347 Query: 111 GYLISCASN-IIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL++ A I GS+ GV Y FLD G+ ++ +S P K+ Sbjct: 348 DYLLAAACGAEIYLHPE---GSVDLKGVSVTRSYFATFLDTYGIKFENFRSHPYKSGFDT 404 Query: 167 FSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY--DKTLVLSDGRIWTGAEAKKVG 222 F+E + + + +V +L+ E R D +L+ G + A G Sbjct: 405 FTEGGMREPEREELTVLVADMERAVAQLLQEGRGDRLAGDAGKILAGGPYLRASRALDAG 464 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKI--KDWNPPKNYWFCDLKNLSISSLLEDTIP 277 LID + ++E+ ++ + + K +DWN P+ + NL+ + + +P Sbjct: 465 LIDKLLYRDEIEDAMDVVETYELPAKSVRRDWNDPRPLTIA-IINLTGNIHSGEGVP 520 >gi|308062696|gb|ADO04584.1| protease IV (PspA) [Helicobacter pylori Cuz20] Length = 292 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESTPSEPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y +N Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQANE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|292490641|ref|YP_003526080.1| signal peptide peptidase SppA, 36K type [Nitrosococcus halophilus Nc4] gi|291579236|gb|ADE13693.1| signal peptide peptidase SppA, 36K type [Nitrosococcus halophilus Nc4] Length = 325 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 16/251 (6%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +PH A + + G I ++ + + ++ + + +I+ ++SPGGS I Sbjct: 73 TTPHTALVEVDGLISADSFASAENIKKGLQTAFESEHSRGVILHINSPGGSPVQTGRIND 132 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I +++ P + + ++ AS GY I+ A++ I A + S+VGSIG L + Sbjct: 133 EIHRLRQEHPNIPLYAVISDVCASGGYYIAVAADQIYADKASIVGSIGALINGFGFVDAM 192 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLGV + + K PFS + Q +Q ++++ + F+++V + R + Sbjct: 193 EKLGVERRLFAAGDYKGFLDPFSPIKESEAQHIQKMLENIHKQFIQIVKDGRGERLKEDP 252 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDL 263 L G +WTG +A +GLID +G + V + + KI ++ P + F Sbjct: 253 SLFSGLVWTGEQALTLGLIDGLGSSDYVAREIVG------AEKIVNYTPKPGFLERFSAQ 306 Query: 264 KNLSISSLLED 274 ++ +L D Sbjct: 307 IGATLIEMLSD 317 >gi|282896623|ref|ZP_06304638.1| Peptidase S49, SppA [Raphidiopsis brookii D9] gi|281198493|gb|EFA73379.1| Peptidase S49, SppA [Raphidiopsis brookii D9] Length = 273 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 132/267 (49%), Gaps = 11/267 (4%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I S + ++E I+ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGAIASSTRKRVLEAIKTVEE-RKFPALLLRIDSPGGTVGDSQEIYGALKE 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LGKKTKIVASFGNISASGGVYIGMGAKHIMANPGTITGSIGVILRGNNLERLLEKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ ++Q+++D SY F++ V+++R +P + +DGRI Sbjct: 129 KVIKSGPYKDILSFDRELTQPEENILQELIDVSYQQFIQTVAQARALPIETVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKN-----L 266 +TG +A +G++D +G +E+ + L G+D K L Sbjct: 189 FTGEQALNLGVVDRLGTEEDARRWTAELVGLDPQKTPCYTLEERKPLLSRVLPGSRYPKS 248 Query: 267 SISSLLEDTIPLMKQTKVQGLWAVWNP 293 SI S ++ + T LW ++ P Sbjct: 249 SIRSGIDW-LEFEMSTSGLPLW-LYRP 273 >gi|293568086|ref|ZP_06679423.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1071] gi|291589168|gb|EFF20979.1| Putative signal peptide peptidase sppA [Enterococcus faecium E1071] Length = 341 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 15/242 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++++ G I + + +E+++ I D + + + ++SPGG Sbjct: 55 GDSTQKIVKLSVDGTIAAGGSSGLFASEGYNHKNFMEQLKAIEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y I + + ++ P+ + MAAS GY IS ++ I A E ++ GSIGV+ Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKIFATEETVTGSIGVII 174 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 L+KLGV +VKS +K S + ++Q +DS+Y FV +VSE Sbjct: 175 SGLNYSGLLEKLGVEDTTVKSGALKDMGSGTRPETKEEETVLQAYIDSAYSRFVAIVSEG 234 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN ++ ++DGRI+ G +AK+VGL+D +G E+ +++ + ++ + P Sbjct: 235 RNKSEEEVKKIADGRIYDGVQAKEVGLVDELGFPEDALKAMRKEQQLEDAELVEYSSAPS 294 Query: 257 NY 258 + Sbjct: 295 GF 296 >gi|282899709|ref|ZP_06307673.1| Peptidase S49, SppA [Cylindrospermopsis raciborskii CS-505] gi|281195588|gb|EFA70521.1| Peptidase S49, SppA [Cylindrospermopsis raciborskii CS-505] Length = 273 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 131/267 (49%), Gaps = 11/267 (4%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I + ++E I+ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGAIASGTRKRVLEAIKTVEE-KKFPALLLRIDSPGGTVGDSQEIYSALKE 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LGKKTKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ ++Q+++D SY F++ V+++R +P + +DGRI Sbjct: 129 KVIKSGPYKDILSFDRELTQPEENILQELIDVSYQQFIQTVAQARALPIETVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKN-----L 266 +TG +A +G++D +G +E+ + L G+D K L Sbjct: 189 FTGEQALNLGVVDRLGTEEDARRWTTELVGLDPQKTLCYTLEERKPLLSRVLPGSRYPKS 248 Query: 267 SISSLLEDTIPLMKQTKVQGLWAVWNP 293 SI S ++ + T LW ++ P Sbjct: 249 SIRSGIDW-LEFEMSTSGLPLW-LYRP 273 >gi|71275280|ref|ZP_00651567.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Dixon] gi|71900134|ref|ZP_00682275.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] gi|170731283|ref|YP_001776716.1| protease IV [Xylella fastidiosa M12] gi|71164089|gb|EAO13804.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Dixon] gi|71730083|gb|EAO32173.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] gi|167966076|gb|ACA13086.1| protease IV [Xylella fastidiosa M12] Length = 633 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 10/231 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVS 72 + S S +A + G+I + + + +D+ A+++ Sbjct: 320 LSLLDAQSVPLGTSSQIAVVVAAGEIKGGDQPAGYIGGESTSMLLRKARDEDAVKAVVLR 379 Query: 73 LSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGG +A E I R + ++ KPV+ + +MAAS GY IS ++ I A +++ GS Sbjct: 380 VNSPGGEVFASEQIRREVVALRKVGKPVVVSMGDMAASGGYWISMDADRIYADPSTISGS 439 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG+ P + LDK+GV V ++ ++P+ Q+ Q+V+D Y F Sbjct: 440 IGIFGLVPNITRTLDKVGVHTDGVGTTRFAGALDITRALDPQVGQIFQNVIDKGYADFTT 499 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 500 KVAQARHRSVKEIDSIARGRVWSGAQAKERGLVDELGGVREAITDAAKRAK 550 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 28/222 (12%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVKNR-KPV 99 GQ ++LI IE ++D +++ L P G YA + A+Q +K+ K + Sbjct: 92 SGQEVQLRDLIRVIEAAAKDKKVERVLLDLDKLQPSG--YASLREVVAALQNLKDSGKQL 149 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYV-KPFLDKLGVSIKSV 155 + M S YL++ ++ I GS+ G+ Y K +KLGV + Sbjct: 150 VAFSESMTQS-QYLLAAQADEIYLDPM---GSVLLEGLAHYRQYFRKGLQEKLGVDVHLF 205 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---- 209 + K+ PF + A + ++ + ++ ++++R + + + Sbjct: 206 RVGEYKSAAEPFVLDAASADAKEADLFWMNDIWQRYLADIAKARKLDSAHLNTIVERLPQ 265 Query: 210 ------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 G A L+D + +E+V Q + GV Sbjct: 266 DIAANHGD--LAKYALAQKLVDGLKTREQVNQLMIQRGVADK 305 >gi|217034551|ref|ZP_03439960.1| hypothetical protein HP9810_874g8 [Helicobacter pylori 98-10] gi|216942971|gb|EEC22454.1| hypothetical protein HP9810_874g8 [Helicobacter pylori 98-10] Length = 292 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESTPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|261838709|gb|ACX98475.1| signal peptide protease IV [Helicobacter pylori 51] Length = 292 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESTPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|317181116|dbj|BAJ58902.1| protease IV [Helicobacter pylori F32] Length = 292 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SRVKK 257 >gi|218888246|ref|YP_002437567.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759200|gb|ACL10099.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 335 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 20/289 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIV 71 F + I + G I++ QE++ ++ + D A+IV Sbjct: 43 FGEDTVFGQGRNKAVLINVNGVIDNRPKSGLFRERPGMVQEVVAQLRLAAEDPDVKAVIV 102 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++ SPGG A + ++ + + + R + V+ + + AAS GY + A++ IVA +++ Sbjct: 103 AIDSPGGGVTASDVLYHELMRHRERTGQKVVALMMDTAASGGYYTALAADRIVAHPSTVT 162 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+F P V +DK+GV KS K SPF E + + Q ++ F Sbjct: 163 GSIGVIFLRPEVAGLMDKIGVRAVVSKSGEHKDMGSPFREGTDEERALFQSIIADMNGRF 222 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 LV E R + +D RI T +A GL+D +G E+ +L +R + Sbjct: 223 QGLVRERRPASHGHEAAFADARILTARQALAAGLVDRIGYFEDALAETASLTGTSDLRVV 282 Query: 250 KDWNPP----KNYWFCDLKNLSIS-SLLEDTIPLMKQTKVQGLWAVWNP 293 P Y S +L++ +P M G +W P Sbjct: 283 TYRREPLPGATEYATATTPAGSGRMALIDLGLPGMDAASRAGFHYLWLP 331 >gi|332674201|gb|AEE71018.1| signal peptide peptidase SppA [Helicobacter pylori 83] Length = 292 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|207108687|ref|ZP_03242849.1| signal peptide protease IV [Helicobacter pylori HPKX_438_CA4C1] Length = 292 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFMLLL----IVLVFFSAKESTPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|24373967|ref|NP_718010.1| signal peptide peptidase SppA, 67K type [Shewanella oneidensis MR-1] gi|24348413|gb|AAN55454.1|AE015683_1 signal peptide peptidase SppA, 67K type [Shewanella oneidensis MR-1] Length = 614 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 22/263 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I G I + + + + D AL++ + SPGGSA+A E Sbjct: 324 QDSVGIIVASGTILNGSQPAGQIGGDSTADLLRKARFDKHIKALVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + +AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQELLALKAAGKPVVVSMGSLAASGGYWISASADYIFATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ V +S S ++P+ ++Q ++ Y F+ LV++ R I ++ Sbjct: 444 LASLGIHTDGVSTSEWAG-LSVTRTLSPQIESVIQRHIERGYLDFISLVAKERKISLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A ++GL+D +G ++ L R I+ P+ + Sbjct: 503 DKIAQGRVWSGKKALELGLVDELGDIDQAVTKAAQLANLSLFDTRLIEQELTPEQRFVQQ 562 Query: 263 L---------KNLSISSLLEDTI 276 + +LS S+LLE + Sbjct: 563 MFASVSAYLPASLSHSTLLEQML 585 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 98/291 (33%), Gaps = 51/291 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-- 62 +K+ + + L ++ S ++ + + G I D ++ ++ IE + Sbjct: 22 TRKLILNLIFFGFLALILIAIGSSEDIKVEDNSALVLNLAGSIVDQKQQVDPIEAALKQG 81 Query: 63 -----------------------DDSATALIVSL---SSPGGSAYAGEAIFRAIQKVKNR 96 D+ + +++ L G S I A+ + K Sbjct: 82 NNGSSDGEILLADIIYVIDNATHDNRISTIVLDLAELKRAGISKLQS--IGDALNRFKES 139 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIK 153 + + Y ++ + I GS+ G+ Y K L+KL + Sbjct: 140 GKKVVAIGNYYEQNQYFLASFATTIYLNPQ---GSVSLDGLSMYNQYFKSALEKLKIKAH 196 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT------- 204 + K+ P+ +++ A + ++ + + + V+++R I + Sbjct: 197 IFRVGTFKSAVEPYMRDDMSDAAREASSALLADIWQSYTQTVAKNRQIDANALVLDSPSY 256 Query: 205 ---LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKD 251 L ++G + A + +D + EE + L A+G + + K Sbjct: 257 LAQLDKAEGD--SATMALNMKWVDTLATDEEFRKIMLDAVGKENNGDSFKQ 305 >gi|226227952|ref|YP_002762058.1| protease IV [Gemmatimonas aurantiaca T-27] gi|226091143|dbj|BAH39588.1| protease IV [Gemmatimonas aurantiaca T-27] Length = 638 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 11/260 (4%) Query: 38 VARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA + +G I D + L + ++ D +L++ ++SPGGS A E I R Sbjct: 343 VAVVYAQGDIVDGEGAEGQIGGEALSRELRKVRNDAKVKSLVLRVNSPGGSVIASERIQR 402 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + + +KPV+ + +AAS GY IS AS I A ++ GSIGV P VK ++ Sbjct: 403 ELALINAKKPVVVSMGSLAASGGYWISTASRQIFAEPNTITGSIGVFAIVPNVKGLANRH 462 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV+ +VK+ + + ++Q D+ Y F+ V++SR +P D ++ Sbjct: 463 GVTFDTVKTGRYADILTLSRPRTEAELAVLQRGTDAVYDAFIARVAQSRRLPVDSVRAIA 522 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNL 266 +GR+W+GA+A ++GL+D +GG + ++ L ++++ K F + Sbjct: 523 EGRVWSGAQALRLGLVDSLGGLDAALRTAARLARITGDYDVREYPRVKTPTERFTEFFEG 582 Query: 267 SISSLLEDTIPLMKQTKVQG 286 S S + + QG Sbjct: 583 SPSPVAARVSKAVTGLSTQG 602 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 100/275 (36%), Gaps = 53/275 (19%) Query: 8 IKTRYVMLSLVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIE----------- 55 I V+L ++ + + + + VE + I + + D E Sbjct: 19 IAVGVVLLIVIAVGFAASAGTRTAVEVRPGSILVIDLEQPLADQAARSESRGLFDDALTT 78 Query: 56 ------------RIERISRDDSATALIVSLSSPGGSA---------YAGEAIFRAIQKVK 94 I + DD +++ G+ A + A++ K Sbjct: 79 GVSPLPLRSATVAIRAAADDDRIGGILLR-----GTVLSDGVSSGYAALREMRAALEDFK 133 Query: 95 N-RKPVITEV--HEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 +KPV+ + ++ Y ++ A++ I GS+ G+ + ++ +K Sbjct: 134 ASKKPVLAYLVTPDVRT---YYVASAADSITLDPF---GSLLFPGMASEQVFLSGLFEKY 187 Query: 149 GVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 G+ ++ + KA PF+ +++P+ + + + R V++SR + + Sbjct: 188 GIGVQVSRVGRFKAAVEPFTRSDMSPENRLQVASYLGDMWAEVKRGVADSRQVDTVALQL 247 Query: 207 LSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +D I ++A+ L+D VG + V L + Sbjct: 248 QADTHGILLPSDAQDAKLVDRVGYFDTVLDDLQRI 282 >gi|254779946|ref|YP_003058053.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori B38] gi|254001859|emb|CAX30109.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori B38] Length = 292 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESTPSTPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|149926443|ref|ZP_01914704.1| Peptidase family U7 [Limnobacter sp. MED105] gi|149824806|gb|EDM84020.1| Peptidase family U7 [Limnobacter sp. MED105] Length = 318 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 16/263 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ V + ++ +V+ + + +E + H A + + G I + + + Sbjct: 32 IFFKLIG-LVYVGILIASVLGLTATPSLEVSR-HTALVDLDGVIASDSLASADRINSSLR 89 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 + + +I+ ++SPGGS I I++++ + KP V E+ AS GY ++ Sbjct: 90 TAFESEGSVGVILRINSPGGSPVQAGLINDEIKRLRAKYPEKPFYAVVEEVCASGGYYVA 149 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + SLVGSIGV+ ++KLGV + + + K PFSE +P Sbjct: 150 AAADKIYVDKASLVGSIGVVMNGFGFTGTMEKLGVERRLITAGENKGFLDPFSEADPYQT 209 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + + + + F+++V E R + L G +WTGA++ ++GL D +G + V + Sbjct: 210 EFAKQMAEEIHQQFIQVVKEGRGEKLAQNPELFSGLVWTGAKSVELGLADELGSIDTVAR 269 Query: 236 SLYALGVDQSIRKIKDWNPPKNY 258 + I D+ ++ Sbjct: 270 DVL------KAEDILDYTEQDSF 286 >gi|315585821|gb|ADU40202.1| signal peptide peptidase SppA [Helicobacter pylori 35A] Length = 292 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|296272293|ref|YP_003654924.1| signal peptide peptidase SppA, 36K type [Arcobacter nitrofigilis DSM 7299] gi|296096468|gb|ADG92418.1| signal peptide peptidase SppA, 36K type [Arcobacter nitrofigilis DSM 7299] Length = 295 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 123/240 (51%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K KT + + + + S +++ ++ +I + G I + ++++ I + Sbjct: 16 LDFITKYFKTIVFLTIIYFIVSSNTTSSISSVEDNANLQKIELAGPILNVDKVLDEINKA 75 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + + +++ ++SPGGS + AI++++ KPV+ + AS Y S +N Sbjct: 76 KANRNIKGVLLVVNSPGGSVAPSVELSYAIKELRAVKPVVAYASGVMASGSYYASIWANK 135 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S+VGSIGV+FQ V+ + K+GVS +++K+ K + N + ++ Sbjct: 136 IIANPGSMVGSIGVIFQGANVEELMKKIGVSTQTIKAGKYKEAGTFSRAWNESEKEELES 195 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ +Y F+ V+++R + ++ I+T +AKKVGLID VG LY + Sbjct: 196 VISDTYDMFITDVAKARRLKKQDNEKYANAHIFTARQAKKVGLIDEVGTISIAKNELYKI 255 >gi|269138839|ref|YP_003295540.1| periplasmic serine protease (ClpP class), protease IV [Edwardsiella tarda EIB202] gi|267984500|gb|ACY84329.1| periplasmic serine protease (ClpP class), protease IV [Edwardsiella tarda EIB202] gi|304558830|gb|ADM41494.1| Protease IV [Edwardsiella tarda FL6-60] Length = 617 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 22/267 (8%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + +A I G I D + +I + D + A+I+ ++SPGGS A Sbjct: 322 TGNGQIAVIFASGPIIDGEATPGSVGGDTTAAQIRQARLDPAIRAIILRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I A+ ++ KPV+ + +AAS GY IS +N I+A+ ++L GSIG+ + Sbjct: 382 EEIRSALAAARDAGKPVVVSMGGLAASGGYWISTPANAIIASPSTLTGSIGIFGVINTFE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +LGV V +SP+ + + +MQ +++ Y F+ LV+ +R+ Sbjct: 442 KPLSQLGVYTDGVATSPLADT-ALTKALPQSVSDLMQLTIENGYQRFISLVATARHKTPA 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + ++ GR+W G +AK GL+D +G ++ L + P+ W+ D Sbjct: 501 QIDSIAQGRVWLGVDAKANGLVDRLGDFDDAVSQAATLAGIKQ---------PQLRWYVD 551 Query: 263 LKNLS--ISSLLEDTIPLMKQTKVQGL 287 + S + S L ++ +QG+ Sbjct: 552 NPSFSEMVFSQLTSSVQASLPQALQGM 578 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 13/194 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L+E + + D + T L++SL++ G+ + I +A+ + + KP++ Sbjct: 98 DLVETLRQAKSDPNITGLVLSLNNFAGADQPSLQYIGKALAEFRASGKPILAVGESY-TQ 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ +N I + VG G+ Y K LDKL VS + K+ P Sbjct: 157 AQYFLASYANKIYLSPQGSVGLQGMATNNLYYKSLLDKLDVSTHIFRVGTYKSAVEPLMR 216 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----GRIWTGAE----AK 219 +++P+A ++ ++ ++ V+ +R++ ++ ++ G TG + A Sbjct: 217 DQMSPQARSADSQWLNGMWNNYLATVAANRHLTPEQVFPGAEQMLKGLQATGGDMAQYAV 276 Query: 220 KVGLIDVVGGQEEV 233 L+D + + EV Sbjct: 277 LHRLVDGLASRSEV 290 >gi|291614214|ref|YP_003524371.1| peptidase S49 [Sideroxydans lithotrophicus ES-1] gi|291584326|gb|ADE11984.1| peptidase S49 [Sideroxydans lithotrophicus ES-1] Length = 317 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 8/214 (3%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + H A I + G I ++ LI ++ +D + +I+ ++SPGGS + Sbjct: 62 SGKHTALIDLTGVISSDSNANADNLIGSLQDAFKDKNTVGVILRINSPGGSPVQAGLVND 121 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I++ + P + V +M AS GY I+ A++ I + S+VGSIGVL + Sbjct: 122 EIRRQRKLHPDIPLYVVVEDMCASGGYYIAAAADKIYVNKASIVGSIGVLMDGFGFTGTM 181 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 KLGV + + K PFS +NPK + +++ + F+ +V + R +T Sbjct: 182 QKLGVERRLFTAGENKGFMDPFSPLNPKHEAFTRKMLEDIHMQFIDVVKQGRGKRLKETP 241 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G WTG +A ++GL D G + V + + Sbjct: 242 ETFSGLFWTGDKAIEMGLADEYGSVDSVARDVLK 275 >gi|221134873|ref|ZP_03561176.1| signal peptide peptidase SppA, 67K type [Glaciecola sp. HTCC2999] Length = 544 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 13/243 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +A + +G I D + + DD+ A+++ + SPGGSA+A E Sbjct: 253 GDAIAVVVAKGTILDGTQSPGTIGGDSTARLLRKARLDDNVKAVVMHVDSPGGSAFASEI 312 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + ++++++ KPV+ + AAS GY IS +++ I+A+ +++ GSIG+ + Sbjct: 313 IRQEVEELRHAGKPVVALMGTYAASGGYWISASADKIIASPSTITGSIGIFGMLMTYEES 372 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LGV V+++ S + ++Q ++ Y F+ LV+E+RN+ ++ Sbjct: 373 LAYLGVYSDGVQTTEF-GFNSLAKTLPDSLGNLIQRNIERGYEKFITLVAENRNMTLEQV 431 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG--VDQSIRKIKDWNPPKNYWFCD 262 ++ GR+W G A ++GL+D +G E S L D + I+ PK + + Sbjct: 432 DSIAQGRVWIGTTALELGLVDELGTLNEALSSAAELAELTDYEVTYIERTLSPKEQFIQE 491 Query: 263 LKN 265 L Sbjct: 492 LLR 494 Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 88/215 (40%), Gaps = 30/215 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVK-NRKPVITE 102 +I D + +++ ++ +D AL++ L S GG + + I K + KPVI Sbjct: 17 EILD-RNVVKALDNAKQDKRIAALVLDL-SYFGGGGLHKLRTVAATIDDFKTSEKPVIA- 73 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVKS 157 + + + + Y ++ ++ I G+LF+ Y K ++KL V K Sbjct: 74 MGDYFSQSQYYLAAHADKIYLNPEG-----GMLFEGYSRNRMYYKEAIEKLKVKTHVFKV 128 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-------- 207 K+ P+ ++++ A + + + + + V+ +RNI D Sbjct: 129 GTFKSAIEPYIRNDMSDAAREANEAWLSVYWDQYKHDVAAARNIDVDNFDDTVANFMPKF 188 Query: 208 --SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++G A + G +D + +E++ Q + L Sbjct: 189 EAANGD--LAQYALQNGWVDELKTREQMRQDMIDL 221 >gi|304413097|ref|ZP_07394570.1| protease IV (signal peptide peptidase) [Candidatus Regiella insecticola LSR1] gi|304283940|gb|EFL92333.1| protease IV (signal peptide peptidase) [Candidatus Regiella insecticola LSR1] Length = 607 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 23/280 (8%) Query: 21 TVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQELIERI---------ERISRDDSATALI 70 + + + S + + +A I I G I D + I + D A+I Sbjct: 307 FISIYDYQSQEQPQQDNEIAVILINGAIVDGAKTPGNIGGDAAAAQIRQARLDPKIKAVI 366 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGSA A E I + ++ KP++ + MAAS GY +S +N I+A+ ++L Sbjct: 367 LRVNSPGGSASASEVIRAELVALRRANKPLVVSMGGMAASGGYWVSTPANYIIASPSTLT 426 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + LD +GV V +SP+ + + P+ QMM+ ++ Y F Sbjct: 427 GSIGIFGVINTFENSLDNVGVHSDGVATSPLADV-AITKALPPEFSQMMKMTIEHGYQTF 485 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+ +R + ++ GR+WTG++A++ GL+D +G ++ + + L K+ Sbjct: 486 IELVATARKKTIAQMDEVAQGRVWTGSDAQQRGLVDQLGDFDDAVKKVAELA------KL 539 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 K + WF + NL ++ D I Q + ++ Sbjct: 540 KQYT---LQWFSEQPNL--KEVILDQINTSMQAMLPPPFS 574 Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 106/282 (37%), Gaps = 49/282 (17%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + FV + + + +L + +YF + + E + + + G I D Sbjct: 19 LNFVRELVCNLFFILLIFIAISLYFQFQNKSEPVKGAL-LVDLNGIIVDKPVVNNKLRVW 77 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 E++E + + D++ T +++SL++ G+ + I +A+ + Sbjct: 78 GRELLGSSSTRLQENSLFEIVETLRQAKSDNNITGIVLSLNNLAGADQPSLQYIGKALSE 137 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKL 148 +N KP+ + E + A Y ++ +N I A GS+ G Y K LDKL Sbjct: 138 FRNSGKPIYA-IGESYSQAQYYLASFANKIYLAPQ---GSVQLHGFSTNTLYYKSLLDKL 193 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 VS + K+ P ++ A + V+S + ++ V+ +R + + Sbjct: 194 KVSTHIFRVGTYKSAVEPMLRDNMSDAAREASSRWVESLWQNYLTTVAANRYLSPQQLFP 253 Query: 207 LSDGRIWTGAE---------AKKVGLIDVVGGQEEVWQSLYA 239 + + T + A L+D + EV L Sbjct: 254 SAP-EMITALQTKEGNLAKYALDNKLVDQIASNPEVETELSK 294 >gi|294140831|ref|YP_003556809.1| signal peptide peptidase SppA, 67K type [Shewanella violacea DSS12] gi|293327300|dbj|BAJ02031.1| signal peptide peptidase SppA, 67K type [Shewanella violacea DSS12] Length = 613 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 13/243 (5%) Query: 35 SPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAYAGEA 85 V I +G I + + +I + DD+ A+++ + SPGGSA+A E Sbjct: 324 DDTVGIIVAKGTILNGNQPAGQIGGESTSLLLRKARFDDNVKAVVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KPV+ + AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQEVLALKTAGKPVVVSMGSYAASGGYWISASADYIYATPTTLTGSIGIFGMITTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L LG+ V +S S + P ++Q ++ YH F+ LV+ RN+ ++ Sbjct: 444 LSSLGIHTDGVATSEWAGI-SVAKGLTPAIKSVIQRHIERGYHDFISLVATERNMSLEEV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A +GLID +G ++ + D + I+ P+ ++ + Sbjct: 503 DNIAQGRVWSGRKALDLGLIDELGDLDDAVAKAADMAGLEDFDSQIIEHELTPQEFFIQE 562 Query: 263 LKN 265 + + Sbjct: 563 MFS 565 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 122/324 (37%), Gaps = 64/324 (19%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ------------- 51 +K+ L+ + +V S V+ S + + G I + + Sbjct: 22 FRKLVLNLFFFGLLAMLIVAISVDDDVQLESGSALVLDLAGSIVEQKRQVDPIEEAMKSG 81 Query: 52 ------------ELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQKVK 94 +++ I+ + D+ +++++ + G ++I A+ + K Sbjct: 82 KNNDGSGEILLADVLNAIDNATADERISSIVLDM----GHLRWTGISKLQSIGDALTRFK 137 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGV 150 KP++ + + Y ++ ++ I GS+ G+ Y K LDKL + Sbjct: 138 ASGKPILATANSYGQN-QYFLASFADTIYLNPQ---GSVELEGLSRYRQYYKSALDKLKI 193 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---- 204 + + K+ P+ +++P A + D++ + + VS +R+I + Sbjct: 194 NAHIFRVGTFKSAVEPYIRDDMSPAAKEANIDLLKDIWASYAATVSSNRDIKPEHLVLGA 253 Query: 205 ------LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L +DG+ + A A + +D + + L + +++ K + N K Sbjct: 254 EDYLSELDKADGK--SAAMAINMHWVDELAT-----AEAFRLEMIETVGKATEGNSYKQI 306 Query: 259 WFCDLKNLSISS---LLEDTIPLM 279 D ++L + L+DT+ ++ Sbjct: 307 SLYDYESLIATQPDLFLDDTVGII 330 >gi|241762558|ref|ZP_04760633.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372886|gb|EER62573.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 637 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 11/272 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSA 66 S +++ F S+ + + + G+I D + + I Sbjct: 297 SFKAVSLASFIGSNPPSSAGSAIGVVTVSGEIVDDETRSGQVSGSTISSLILDTLAKGDI 356 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAE 125 AL+V + SPGGS A E + AI K + PVI + +AAS GY IS ++ I A Sbjct: 357 KALVVRVDSPGGSVSAAEQMRSAILAAKAKGLPVIVSMGSVAASGGYWISTPADKIFADP 416 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +++ GSIGV P + L K+G+S VK++P+ +P F P+ Q+MQ VD+ Sbjct: 417 STITGSIGVFSLIPTFQQTLHKIGLSADGVKTTPLSGQPDVFRGTTPEFDQLMQFGVDTI 476 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQ 244 Y F +V+ SR++P DK +++GR+W+G +AKK+GL+D G ++ +D Sbjct: 477 YDRFTSIVASSRHLPLDKVREIAEGRVWSGVDAKKIGLVDQYGSLQDAVTEAAKRAHLDP 536 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 S ++ + ++ LKNL + I Sbjct: 537 SHTHMQFIDEEPSFVEMILKNLFQHQASDAKI 568 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 20/204 (9%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAY--AGEAIFRAIQKVKNRKPVITEVHEM 106 +E++ +E+ +R+ A+++ LS S GG A A + ++ KPV++ Sbjct: 91 REVVYGLEQAARNPKIKAVVLDLSDFSGGGRAAISAVDNALDKVR--AAGKPVLSFAGFY 148 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A Y I+ I V +GV Y K LDKLGV K + K+ P Sbjct: 149 N-DARYRIAAHGTEIWLPNLGEVALLGVGGNQLYYKGLLDKLGVETKIYRVGRFKSFVEP 207 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--------DGRIWTGA 216 F +E +P A Q + +S + ++ ++ +R P + G + Sbjct: 208 FTRTEQSPDAKAANQALANSLWQTTLQDIAHAR--PKAHVAEWALNPTSFLKSGHSF-AE 264 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 A+ G+ID +G + + +L Sbjct: 265 LAQSAGMIDHIGNAIDFGNRVASL 288 >gi|238919550|ref|YP_002933065.1| signal peptide peptidase SppA, 67K type, [Edwardsiella ictaluri 93-146] gi|238869119|gb|ACR68830.1| signal peptide peptidase SppA, 67K type, putative [Edwardsiella ictaluri 93-146] Length = 617 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 22/267 (8%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + +A I G I D + +I + D + A+I+ ++SPGGS A Sbjct: 322 TGNGQIAVIFASGPIIDGEATPGSVGGDTTAAQIRQARLDPAIRAIILRVNSPGGSVTAS 381 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I A+ ++ KPV+ + +AAS GY IS +N IVA+ ++L GSIG+ + Sbjct: 382 EEIRSALAAARDAGKPVVVSMGGLAASGGYWISTPANTIVASPSTLTGSIGIFGVINTFE 441 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L LGV V +SP+ + + +MQ +++ Y F+ LV+ +R+ Sbjct: 442 KPLGLLGVYTDGVATSPLADT-ALTKALPQSVSDLMQLTIENGYQRFISLVATARHKTPA 500 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + ++ GR+W G +AK GL+D +G ++ L + P+ W+ D Sbjct: 501 QIDNIAQGRVWLGVDAKANGLVDRLGDFDDAVSQAATLAGIKQ---------PQLQWYVD 551 Query: 263 LKNLS--ISSLLEDTIPLMKQTKVQGL 287 + S + S L ++ +QG+ Sbjct: 552 NPSFSEMVFSQLTSSVQASLPQALQGM 578 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 86/195 (44%), Gaps = 15/195 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L++ + + D + T L++SL++ G+ + I +A+ + + KP++ Sbjct: 98 DLVDTLRQAKSDPNITGLVLSLNNFAGADQPSLQYIGKALSEFRASGKPILAVGENY-TQ 156 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ ++ I + VG G+ Y K LDKL VS + K+ P Sbjct: 157 AQYFLASYADKIYLSPQGSVGLQGMATNNLYYKSLLDKLDVSTHIFRVGTYKSAVEPLMR 216 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P+A ++ + ++ +V+ +R++ ++ + G++ G + A Sbjct: 217 DQMSPQARSADSQWLNGMWSNYLTIVATNRHLTPEQVFPGA-GQMLKGLQATGGDMAQYA 275 Query: 219 KKVGLIDVVGGQEEV 233 L+D + + E Sbjct: 276 VLHRLVDGLASRSEA 290 >gi|294669763|ref|ZP_06734829.1| hypothetical protein NEIELOOT_01663 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308329|gb|EFE49572.1| hypothetical protein NEIELOOT_01663 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 351 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 15/240 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAY 81 S+ + + H A I + G I + L + +E + +I+ +SPGGS Sbjct: 88 GSALHKQSKEHTAVIRLNGVIGGGYQDQVEMLRDGLEAAYANGKVKGIIIRANSPGGSPV 147 Query: 82 AGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 F ++++K P+ +M AS Y I+ A++ I A +SLVGSIGV+ Sbjct: 148 ISNTAFEEVRRLKAEHKDIPLYVVTEDMCASGCYYIAAAADKIYADPSSLVGSIGVIGGS 207 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +DK+GV + + K PFS P+ + Q +++ + F++ V R Sbjct: 208 FDFTELMDKIGVKRRLKTAGSNKGMGDPFSPETPEQQAIWQQMLNDIHGEFIKAVKSGRG 267 Query: 199 IPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 D + GR++TG EAKK GLID G V + + ++ D+ P ++ Sbjct: 268 SRLKDNDPEIFSGRVYTGLEAKKNGLIDDFGNIYSVARDVV------QAPELVDYTPEED 321 >gi|170726647|ref|YP_001760673.1| signal peptide peptidase SppA [Shewanella woodyi ATCC 51908] gi|169811994|gb|ACA86578.1| signal peptide peptidase SppA, 67K type [Shewanella woodyi ATCC 51908] Length = 613 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 14/269 (5%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + V I +G I + + E + + DD A+++ + SPGGSA+A E Sbjct: 323 TNDTVGIIVAKGTILNGNQPAGNIGGESTSELLRKARFDDQVKAVVLRVDSPGGSAFASE 382 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + + +K KPV+ + AAS GY IS +++ I A T+L GSIG+ + Sbjct: 383 QIRQEVLALKTAGKPVVVSMGSYAASGGYWISASADYIYATPTTLTGSIGIFGMITTFED 442 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L +G+ V +S S + P ++Q V+ YH F+ LV+ R++ D Sbjct: 443 SLSSIGIHTDGVATSEWAGI-SVAKGLTPGIKDVIQRHVERGYHDFISLVANERDMSLDD 501 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCD 262 ++ GR+W+G +A +GL+D +G ++ + +D +I + + F Sbjct: 502 VDSIAQGRVWSGRKALSLGLVDELGDLKQAVAKAAQMAELDDFDSEIIEQDLTPQEQFIQ 561 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 S S+ L +++ + ++ L + W Sbjct: 562 EMFASASAYLPESMS--HSSVIEQLLSQW 588 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 99/279 (35%), Gaps = 50/279 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ------------- 51 +K+ + + +V + V + + + G I + + Sbjct: 22 TRKLILNVIFFGFLLALIVAMNIDDSVNIETGSALVLNLSGSIVEQKRQVDPFEEAMKSG 81 Query: 52 ------------ELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQKVK 94 +++ I+ + D +++++ + G ++I A+ + K Sbjct: 82 KNNDGQGEILLADVLNVIDNAAHDTRISSIVLDM----GHLRWTGISKLQSIGDALIQFK 137 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPVI + + + Y ++ ++ I V G+ Y K L+KL V Sbjct: 138 ESGKPVIAQANSYGQN-QYFLASFADTIYLNPQGGVELEGLSRYRQYYKSALEKLKVKAH 196 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT------- 204 + K+ P+ +++P A + +++ + + +V+++RNI D Sbjct: 197 IFRVGTFKSAVEPYIRDDMSPAAKEANLALLNDIWSSYQGVVADNRNIAGDDLVLNSERY 256 Query: 205 ---LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L ++G+ + A + +D + E + L Sbjct: 257 LAELDKAEGQ--SAEMALNMNWVDELATSESFRLKMLDL 293 >gi|240950308|ref|ZP_04754583.1| protease IV, signal peptide peptidase [Actinobacillus minor NM305] gi|240295210|gb|EER46018.1| protease IV, signal peptide peptidase [Actinobacillus minor NM305] Length = 622 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 15/266 (5%) Query: 36 PHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A I I G+I + LI +++R+ +D + LI+ ++SPGGSA A E I Sbjct: 326 NKIAVINIEGEITMGESLEDTAGADTLIRQLQRVRQDKTVRGLILRINSPGGSALASELI 385 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++ ++ PV++ + MAAS GY I+ S+ IVA +L GSIG+ + Sbjct: 386 RQEVEAIQQAGIPVVSSMGGMAASGGYWIAATSDAIVADPNTLTGSIGIFGVLFNFEKTA 445 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 LGV + +SP+ AE S ++ +++Q V+ Y F+ LVS R + K Sbjct: 446 QNLGVREDGISTSPL-AEISGLKPLSSHQSELIQMSVEQGYREFLDLVSRGRKMDLAKVD 504 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G++W G +A+ +GL+D +G ++ L L RK+K+ N P+ F Sbjct: 505 QIAQGQVWLGQKAQSLGLVDQLGNFDDTLALLGNLIN----RKLKEQNKPEIETFTPQWF 560 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVW 291 L I K + A W Sbjct: 561 TEQDESLFGEISRSLNAKAKLNLAGW 586 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 61/158 (38%), Gaps = 5/158 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGE-AIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++ ++ D T L++ L G Y + + I K KPVI S Sbjct: 96 DIVDALKNAQTDPRITGLVLELDKFEGGDYPSLTYLGKGITAFKTSGKPVIAIGSSYGQS 155 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ I V G+ + Y K DK+ + K+ P Sbjct: 156 -QYYLASFADQIYLNRAGAVELQGLNYSNLYFKSLFDKIEAKPYIFRVGTYKSAVEPLIR 214 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 E++ +A Q + ++ + + ++++R I K L Sbjct: 215 DEMSEEAKQNAKGWLEPMWKNLQQGIADNRQIDVGKIL 252 >gi|317182638|dbj|BAJ60422.1| protease IV [Helicobacter pylori F57] Length = 292 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSTPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGIMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|254786960|ref|YP_003074389.1| signal peptide peptidase SppA, 67K type [Teredinibacter turnerae T7901] gi|237686224|gb|ACR13488.1| signal peptide peptidase SppA, 67K type [Teredinibacter turnerae T7901] Length = 618 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 13/262 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSA 80 + + I +G I + L E I R DDS A+++ + S GGSA Sbjct: 313 ELPSGGKTLGLIVAQGNIVGGDQPNGVIGSASLTELIRRARDDDSIAAIVLRIDSGGGSA 372 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 +A E I + I + KPV + MAAS GY ++ A + I A ++L GSIGV P Sbjct: 373 FASEVIRQEILNTRKSGKPVYISMGSMAASGGYWVASAGDEIWATPSTLTGSIGVWGLIP 432 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L+KLGV V ++ + P ++ A Q++Q ++ Y F+ +V+E+R+ Sbjct: 433 NLANALNKLGVHSDGVGTTELADIYHPDRPLSAPAKQLIQSGINDVYDHFLNIVAEARDS 492 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL--GVDQSIRKIK-DWNPPK 256 ++ GR+W+G A +GL+D +G + ++ +++IK + P + Sbjct: 493 DPASVHEIAQGRVWSGEAAASLGLVDKLGTLHDTLDAVAEHIGAGSYRVKQIKRELTPTE 552 Query: 257 NYWFCDLKNLSISSLLEDTIPL 278 ++ +S+S L++ L Sbjct: 553 EIMHALMQEVSVSGLVDQHSQL 574 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 91/234 (38%), Gaps = 22/234 (9%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L++ I + DD T+++++L+ GG E + +A++ K KP+ + + Sbjct: 89 DLVDTINHAATDDRITSMVLNLTKFAGGGISKMEELGQALEHFKAAGKPIYAY-GDNLSQ 147 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ ++ I E GS+ G Y K DKL V + K P Sbjct: 148 QQYFLASFADTIYLNEM---GSVLITGFGMYQNYFKDAADKLSVDFHVFRVGQYKDAVEP 204 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV----LSDG----RIWTGA 216 F ++++P + + ++ ++ +V V+ +R + L+D Sbjct: 205 FMRNDMSPASREHNSRWLNELWNTYVNRVTGNRQLAPGAIDSYLASLTDANETNEDSQAE 264 Query: 217 EAKKVGLIDVVGGQEEVWQSLY---ALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 +A + GL+D + + +V Q L D + + +L + Sbjct: 265 KALQAGLVDKLVSRVDVRQLLAEKVGASDDGETYDAIGYEEYRQATQLELPSGG 318 >gi|124265853|ref|YP_001019857.1| putative protease transmembrane protein [Methylibium petroleiphilum PM1] gi|124258628|gb|ABM93622.1| putative protease transmembrane protein [Methylibium petroleiphilum PM1] Length = 336 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 15/253 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSAT 67 V+ +L+ ++ ++ V + PH A I IRG+I ++ + + D A Sbjct: 64 VIFALIAWALITQQRNAAVP-SGPHTALIEIRGEIAAEALASAEGINAALRTAFEDAGAQ 122 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+++ ++SPGGS + I+++K K + E+ ASA Y I+ ++ I Sbjct: 123 AVVLRINSPGGSPVQAGLVTDEIRRLKGLHADKKLYAVCEELCASAAYYIAAVADEIFVD 182 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + S+VGSIGVL ++KLGV + + + K PFS ++ Q +V+ Sbjct: 183 KASIVGSIGVLMDGFGFTGTMEKLGVERRLITAGDNKGLLDPFSPLSEAHKAYAQAMVNQ 242 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + F+++V + R + G W+G A + GL D +G + V + + Sbjct: 243 IHQQFIKVVKDGRGARLKEAPETFSGLFWSGESAVQQGLADRLGSLDYVAREVV------ 296 Query: 245 SIRKIKDWNPPKN 257 ++ D+ P +N Sbjct: 297 KAEEVIDYTPKEN 309 >gi|308064188|gb|ADO06075.1| protease IV (PspA) [Helicobacter pylori Sat464] Length = 292 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSEPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P Q +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKQFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|90408812|ref|ZP_01216955.1| putative protease IV [Psychromonas sp. CNPT3] gi|90310074|gb|EAS38216.1| putative protease IV [Psychromonas sp. CNPT3] Length = 616 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 16/276 (5%) Query: 28 SSHVEDN-SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPG 77 S++ E N +A I G+I + Q + ++ + A+++ L SPG Sbjct: 317 SNNAETNQEDIIALIHGSGEIINGESNNSVMAGQSFSQLLQDALDNKRVKAVVIRLDSPG 376 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GSA A E I + + +K K V+ + ++AS GY I+ A++ IVA T+L GSIG+ Sbjct: 377 GSATASEKIRQKVLALKKSGKKVVISMASVSASGGYWIASAADHIVAYPTTLTGSIGIFA 436 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Y + L+KLG+ V ++P+ P ++ ++Q ++ Y F+ +VSE Sbjct: 437 LYASAEKALNKLGIYNDGVGTAPLSG-LDPTRALDKDIADLLQMAIEHGYQQFLTVVSEG 495 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS--IRKIKDWNP 254 R++ + ++ GR+WTG +AK++GL+D +G E+ + L S ++ I+ Sbjct: 496 RHMSVEDVDKIAQGRVWTGTDAKRLGLVDQLGNLEDAIKKAAQLAKLDSYQVKSIQMKLS 555 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 P F D+ + + PL+ ++ L ++ Sbjct: 556 PVEQMFNDVFAQGVQLITPQ--PLLNSPILKTLQSL 589 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 96/285 (33%), Gaps = 51/285 (17%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------- 50 +L ++ L + + E N+ + + G+I + Sbjct: 21 FFLNSIFILVIIGLLFLLNQSPNEAEINNNSILTLNFSGRIVEQKTPKEFSDEISKQLFS 80 Query: 51 ----------QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVK-NR 96 ++I I D TA+++ L S S I A+ + K + Sbjct: 81 SEQTQQEYQVDDIINSIHHAQNDPKITAILLQLDDLQSA--SLNQIMDIGAALNQFKTSN 138 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KPVI + YL++ ++ I +V G Y K LDKL ++ K Sbjct: 139 KPVIASADNY-SQIQYLLASYADNIALDPQGIVYLPGFSVYRLYFKDALDKLLITPHIFK 197 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNI----------PYDKT 204 K+ PF++ ++ ++ + + + +++ V R P Sbjct: 198 VGTYKSFVEPFTQNHMSAQSKDANERWLGQLWQTYIQTVLSQRKDNKKINAQSISPKIAA 257 Query: 205 LVLS----DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 L ++ G + A +VGL+D + ++V +L Sbjct: 258 LKIAFKKAKGD--SALYALQVGLVDDLTSTDDVLNALKKDAKQAG 300 >gi|208435302|ref|YP_002266968.1| signal peptide protease IV [Helicobacter pylori G27] gi|208433231|gb|ACI28102.1| signal peptide protease IV [Helicobacter pylori G27] Length = 292 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|71901706|ref|ZP_00683780.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] gi|71728523|gb|EAO30680.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Xylella fastidiosa Ann-1] Length = 630 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 10/231 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVS 72 + S + S +A + G+I + + ++ +D+ A+++ Sbjct: 317 LSLLDAQSALLGTSSQIAVVVAAGEIKGGDQPAGYIGGESTSMLLRKVRDEDAVKAVVLR 376 Query: 73 LSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGG +A E I R + ++ KPV+ + +MAAS GY IS ++ I A +++ GS Sbjct: 377 VNSPGGEVFASEQIRREVVALRKVGKPVVVSMGDMAASGGYWISMDADRIYADPSTISGS 436 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG+ P + LDK+GV V ++ ++P+ Q+ Q+V+D Y F Sbjct: 437 IGIFGLVPNITRTLDKVGVHTDGVGTTRFAGALDITRALDPQVGQIFQNVIDKGYADFTT 496 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 497 KVAQARHRSVKEIDSIARGRVWSGAQAKERGLVDELGGVREAITDAAKRAK 547 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 28/222 (12%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVK-NRKPV 99 GQ ++LI IE ++D +++ L P G YA I A+Q +K + K + Sbjct: 89 SGQEVQLRDLIRVIEAAAKDKKVERVLLDLDKLQPSG--YASLREIVAALQNLKGSGKQL 146 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYV-KPFLDKLGVSIKSV 155 + M S YL++ ++ I GS+ G+ Y K +KLGV + Sbjct: 147 VAFSESMTQS-QYLLAAQADEIYLDPM---GSVFLEGLAHYRQYFRKGLQEKLGVDVHLF 202 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---- 209 + K+ PF + A + ++ + ++ ++++R + + + Sbjct: 203 RVGEYKSAAEPFVLDAASADAKEADLFWMNDIWQRYLADIAKARKLDSAHLNTIVERLPQ 262 Query: 210 ------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 G A L+D + +E+V Q + GV Sbjct: 263 DIAANHGD--LAKYALAQKLVDGLKTREQVNQLMIQRGVADK 302 >gi|119486156|ref|ZP_01620216.1| protease IV [Lyngbya sp. PCC 8106] gi|119456647|gb|EAW37776.1| protease IV [Lyngbya sp. PCC 8106] Length = 273 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 9/266 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI + G I + ++E ++ I AL++ + SPGG+ + I+ A++K Sbjct: 10 RKQIARIEVTGVIASDTRKRVLEALKTIEE-RKYPALLLRIDSPGGTVADSQEIYSALKK 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++++ ++ ++AS G I + I+A ++ GSIGV+ + ++ LDK+GVS Sbjct: 69 LQDKLKIVASFGNISASGGVYIGMGAQHIMANPGTITGSIGVIIRGNNIEGLLDKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K + ++ Q++Q+++D+SY FV V+ESRN+ +DGRI Sbjct: 129 KVIKSGPYKDILAFDRQLTDPEKQILQELIDTSYRQFVITVAESRNLEETAVRSFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS-- 269 +TG +A ++G+ID +G +EE L +D + PK+ L N ++ Sbjct: 189 FTGEQALELGVIDRLGTEEEARCWAAELVNLDPDKTECDTLEKPKSLVSRVLSNNNLETS 248 Query: 270 --SLLEDTIPLMKQTKVQGLWAVWNP 293 + ++ + T LW ++ P Sbjct: 249 RLASAKNWLEFELSTSGLPLW-LYRP 273 >gi|239995030|ref|ZP_04715554.1| signal peptide peptidase SppA, 67K type [Alteromonas macleodii ATCC 27126] Length = 621 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 115/212 (54%), Gaps = 11/212 (5%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +E + VA + +G I D + + DD+ A+++ + SPGGSA+ Sbjct: 325 IESDMDKVAIVVAKGTILDGNQKAGTIGGDSTARLLRKARLDDNVKAVVLQIDSPGGSAF 384 Query: 82 AGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I + + +++ KPVI + AAS GY I+ +++ I+A+ +++ GSIGV + Sbjct: 385 ASEIIRQEVLQLQQAGKPVIASMSTYAASGGYWIAASTDRIIASPSTITGSIGVFGMFMT 444 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + LD LG+ V S+ + S + P+ Q++Q V+++Y F+ LVS +R + Sbjct: 445 YENSLDYLGIHSDGVGSTELAGF-STVRPLAPEFGQILQRNVENTYGNFLSLVSNARGMS 503 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ ++ GR+W G +A ++GL+D +G ++ Sbjct: 504 VEEVDSVAQGRVWIGEDAIELGLVDQLGTVDD 535 Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 25/255 (9%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAA 108 +++++ +E +D AL++ L GG + AI K KPV + + + Sbjct: 96 RDVVKVLENAQKDRRIKALVLDLQGLTGGGLDKLRTVANAIDAFKESEKPVYA-IGDYFS 154 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVKSSPMKAE 163 Y ++ ++ I G++F+ Y K L+KL V+ + K+ Sbjct: 155 QDQYYLAAHADSIYLNPMG-----GLMFEGYGRYGMYFKDMLEKLKVTTHIFRVGTYKSA 209 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--W------ 213 P ++++ +A + + +D + + V+ +R I +G + + Sbjct: 210 VEPIMRNDMSEEAKEAEKQWLDGYWAQYKADVAAARGIDEANFDETLEGLLAKFEAAGGD 269 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI--SSL 271 A + +D + +EEV L L + + Y + + S + Sbjct: 270 FAQYALENNWVDALKTREEVRLELTELVGEDENNHGVNLTSFNTYLKVVNPPMPVIESDM 329 Query: 272 LEDTIPLMKQTKVQG 286 + I + K T + G Sbjct: 330 DKVAIVVAKGTILDG 344 >gi|119510440|ref|ZP_01629573.1| Peptidase S49, SppA [Nodularia spumigena CCY9414] gi|119464862|gb|EAW45766.1| Peptidase S49, SppA [Nodularia spumigena CCY9414] Length = 273 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 133/266 (50%), Gaps = 9/266 (3%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I S + ++E ++ + AL++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGAIAGSTRKRVLEALKTVEE-KKFPALLLRIDSPGGTVGDSQEIYSALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++ + ++ ++AS G I + I+A ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LRKKIKIVASFGNISASGGVYIGMGAEHIMANPGTITGSIGVILRGNNLERLLEKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S ++ ++Q+++D SY FV ++E+R++ + +DGRI Sbjct: 129 KVIKSGPYKDILSFDRQLTAPEETILQELIDISYQQFVHTIAEARSLEVETVKTFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNL-SISS 270 +TG +A ++G++D +G +E+ + G+D K L +SS Sbjct: 189 FTGEQALELGVVDRLGTEEDARCWTAEMVGLDPDKAPCYTLEERKPLLSRVLPGSRQVSS 248 Query: 271 LLEDTIPLMK---QTKVQGLWAVWNP 293 L I ++ T LW ++ P Sbjct: 249 GLGAGINWLEFEMSTSGLPLW-LYRP 273 >gi|108563786|ref|YP_628102.1| signal peptide protease IV [Helicobacter pylori HPAG1] gi|107837559|gb|ABF85428.1| signal peptide protease IV [Helicobacter pylori HPAG1] Length = 292 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I + + + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTDDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|312113690|ref|YP_004011286.1| signal peptide peptidase SppA, 36K type [Rhodomicrobium vannielii ATCC 17100] gi|311218819|gb|ADP70187.1| signal peptide peptidase SppA, 36K type [Rhodomicrobium vannielii ATCC 17100] Length = 328 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 91/279 (32%), Positives = 153/279 (54%), Gaps = 11/279 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +S H+AR+ I G I DS+ + +E++ +DD+ A+IV++ SPGG+ GEA Sbjct: 44 DGASGFGIGRDHIARVTISGFIGDSKSRHDMLEKLRKDDNVKAVIVAVDSPGGTTTGGEA 103 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++ ++++ N KPV MA SA YL A++ IVA ++ GS+GV+FQ+ V L Sbjct: 104 LYEDLRELANAKPVAAVFGTMATSAAYLGGIATDYIVARGNTITGSVGVIFQWADVSELL 163 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + V+S +KA+PSPF+ V+ A + + +V S WFV LV+E R Sbjct: 164 SKVGVKVDEVRSGALKAKPSPFTPVDDAARALTEQLVKDSQGWFVGLVAERRKAAVSSLE 223 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK-------NY 258 + GRI+TG +A +VGLID +G ++ + S K++DW P + Sbjct: 224 DIKTGRIYTGRQAAQVGLIDAIGDEQVAIKWFTDARKVPSGLKVRDWKPGQSVSSLLSAS 283 Query: 259 WFCDLKNLSISSLLE----DTIPLMKQTKVQGLWAVWNP 293 L ++SL++ + + ++K + GL+++W+P Sbjct: 284 MSSLALKLGVASLVDAAVLEGLDILKDRPLDGLFSIWHP 322 >gi|218779085|ref|YP_002430403.1| signal peptide peptidase SppA, 36K type [Desulfatibacillum alkenivorans AK-01] gi|218760469|gb|ACL02935.1| signal peptide peptidase SppA, 36K type [Desulfatibacillum alkenivorans AK-01] Length = 324 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 34/319 (10%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHV--------------EDNSPHVARIAIRGQIEDS---- 50 K+ ++++L+ + S S ++ + V I + G I D+ Sbjct: 3 KSFILLIALIVFLLPGCSPSFNLFKDASDPLKEHAVSGEGKDKVLMITVAGVISDTPSNE 62 Query: 51 ---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPV 99 QE++ ++ DD+ A+++ + SPGG+A A + ++ I++ K + K V Sbjct: 63 LFSSKPSVVQEVVSQLRMAEEDDAVKAVVIKVDSPGGTATASDILYHEIKEFKEKTGKKV 122 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + +AAS GY +S ++ IVA TS+ GS+GV+ P K +DK+GV ++ KS Sbjct: 123 MCVFMNVAASGGYYMSLPADRIVAHPTSITGSVGVIMVQPAFKDLMDKVGVGMRVSKSGR 182 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 K SPF + + V+++ V++ FV V + RN+ + + RI+ ++A Sbjct: 183 NKDMGSPFRDPTDEEVRLLNGVINDLAEQFVGHVKDHRNLTPEALEEVRTARIFVASKAL 242 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN-----YWFCDLKNLSISSLLED 274 ++GLID V + + K+ + K Y ++ +L+ Sbjct: 243 ELGLIDEVAYLPQAIDEAKEMAEIPEDSKVVVYRRSKIANDTVYNIAGSQSSVKGALVNV 302 Query: 275 TIPLMKQTKVQGLWAVWNP 293 P G + +W P Sbjct: 303 NFPTGYSDLPMGFYYLWAP 321 >gi|90020544|ref|YP_526371.1| translation elongation factor G [Saccharophagus degradans 2-40] gi|89950144|gb|ABD80159.1| signal peptide peptidase SppA, 67K type [Saccharophagus degradans 2-40] Length = 610 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 18/276 (6%) Query: 36 PHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ I G I D + + + +D+S AL++ + S GGSA+A E I Sbjct: 313 DNIGLIVASGTIYDGRHPEGTIGGDSMADLLREAQKDNSLKALVIRVDSGGGSAFASEVI 372 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I +K + P+ + +AAS GY I+ A++ I A +L GSIGV YP + L Sbjct: 373 RQEISNLKAKGIPIYISMGSLAASGGYWIATAADEIWATPATLTGSIGVWGLYPNLTDSL 432 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 D LG+ + ++ + ++ A +++Q VD+ Y F+ +V+++R I ++ Sbjct: 433 DALGIHTDGIGTTELADVFRTDRPLSNAAEKVLQSGVDNIYSRFLSIVADARGISVEQVN 492 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNYWFCDL 263 ++ GR+W+G AK++GL+D +GG +V ++ D ++ I K + L Sbjct: 493 EIAQGRVWSGTTAKELGLVDELGGLNDVIKAAAERQQLSDYRVKLIAQPLSAKEQFLRAL 552 Query: 264 K------NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 +I + L D P +K K +++ P Sbjct: 553 TQNAKALTSNIENTLLDNAPAIKLFKDLNQQSLFEP 588 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 14/208 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +LI I+R D +AL+++L+ GG + AI + K + + + Sbjct: 83 DLITAIDRAKTDSRISALVLNLNHLTGGGVSKLTEVGDAILRFKEGGKEVVAFGDNLSQQ 142 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y ++ ++ I + V G Y DKL + + K PF + Sbjct: 143 QYYLATYADHIYLNDLGAVFVTGYGIYRNYWAEAADKLKLKFHVFRVGDYKDAIEPFVRN 202 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTGAE---AKK 220 ++ + + ++ + + V R +P ++G A+ Sbjct: 203 SMSDASREHNGRWLNELWGLYTSQVEAQRELPVGAVNEYITSLPKALPNYSGTAAEFARD 262 Query: 221 VGLIDVVGG---QEEVWQSLYALGVDQS 245 GL+D V E++ + Y G ++ Sbjct: 263 AGLVDDVVSRVKLREIFIAKYGEGKEKG 290 >gi|28199904|ref|NP_780218.1| protease IV [Xylella fastidiosa Temecula1] gi|182682655|ref|YP_001830815.1| signal peptide peptidase SppA, 67K type [Xylella fastidiosa M23] gi|28058025|gb|AAO29867.1| protease IV [Xylella fastidiosa Temecula1] gi|182632765|gb|ACB93541.1| signal peptide peptidase SppA, 67K type [Xylella fastidiosa M23] gi|307578935|gb|ADN62904.1| signal peptide peptidase SppA, 67K type [Xylella fastidiosa subsp. fastidiosa GB514] Length = 633 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 10/231 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVS 72 + S + S +A + G+I + + ++ +D+ A+++ Sbjct: 320 LSLLDAQSALLGTSSQIAVVVAAGEIKGGDQPAGYIGGESTSMLLRKVRDEDAVKAVVLR 379 Query: 73 LSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGG +A E I R + ++ KPV+ + +MAAS GY IS ++ I A +++ GS Sbjct: 380 VNSPGGEVFASEQIRREVVALRKVGKPVVVSMGDMAASGGYWISMDADRIYADPSTISGS 439 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG+ P + LDK+GV V ++ ++P+ Q+ Q+V+D Y F Sbjct: 440 IGIFGLVPNITRTLDKVGVHTDGVGTTRFAGALDITRALDPQVGQIFQNVIDKGYADFTT 499 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 V+++R+ + ++ GR+W+GA+AK+ GL+D +GG E Sbjct: 500 KVAQARHRSVKEIDSIARGRVWSGAQAKERGLVDELGGVREAITDAAKRAK 550 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 28/222 (12%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVKNR-KPV 99 GQ ++LI IE ++D +++ L P G YA + A+Q +K+ K + Sbjct: 92 SGQEVQLRDLIRVIEAAAKDKKIERVLLDLDKLQPSG--YASLREVVAALQNLKDSGKQL 149 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYV-KPFLDKLGVSIKSV 155 + M S YL++ ++ I GS+ G+ Y K +KLGV + Sbjct: 150 VAFSESMTQS-QYLLAAQADEIYLDPM---GSVLLEGLAHYRQYFRKGLQEKLGVDVHLF 205 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---- 209 + K+ PF + A + ++ + ++ ++++R + + + Sbjct: 206 RVGEYKSAAEPFVLDAASADAKEADLFWMNDIWQRYLADIAKARKLDSAHLNTIVERLPQ 265 Query: 210 ------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 G A L+D + +E+V Q + GV Sbjct: 266 DIAANHGD--LAKYALAQKLVDGLRTREQVNQLMIQRGVADK 305 >gi|317011567|gb|ADU85314.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori SouthAfrica7] Length = 292 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS N P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSNPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVEDLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDANHYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|332993393|gb|AEF03448.1| signal peptide peptidase SppA, 67K type [Alteromonas sp. SN2] Length = 621 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 11/214 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGS 79 + + VA + +G I + + + D++ A+++ + SPGGS Sbjct: 323 PSINSDIDKVAIVVAKGTILNGNQKAGTIGGDSTARLLRKARLDENVKAVVLQIDSPGGS 382 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 E I + + ++KN KPV+ + AAS GY I+ ++ I A+ +++ GSIGV + Sbjct: 383 TLGSEIIRQEVLELKNAGKPVVVSMSTYAASGGYWIAANADRIFASPSTITGSIGVFGMF 442 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + LD LG+ V S+ + S + P+ Q++Q V++SY F+ LVS +R+ Sbjct: 443 MTYENSLDYLGIHSDGVGSNELAGF-SAVRPLAPEFGQILQRNVETSYGNFLSLVSNARD 501 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + D+ ++ GR+W G +A ++GL+D +G E+ Sbjct: 502 MTVDEVDDVAQGRVWIGTDALELGLVDELGTLED 535 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 103/288 (35%), Gaps = 48/288 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQI------------ 47 + F K ++ V + + S + A + + GQ+ Sbjct: 19 LNFTRKLFFNVIFLVIFVGIIIAITSQEDDQLTVKANSALLLTLNGQLVIEKESVDPFEQ 78 Query: 48 --EDS------------QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQ 91 +D+ +++++ IE +D AL++ L S GG + RAI Sbjct: 79 FLQDAMGSEPDNPEVLVRDVVKVIENAKQDRRIKALVLDLQGLSGGG-LDKLRTVARAIN 137 Query: 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDK 147 K + KPV + + Y ++ +N + GS+ G Y K FL+K Sbjct: 138 DFKTSEKPVYA-IGDYYTKEQYYLASHANHVYLNPM---GSLLLDGYGRYGMYFKDFLEK 193 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 L V+ + K+ P ++++ A + + +D + + V+ +R IP Sbjct: 194 LKVTTHIFRVGTYKSAVEPLIRNDMSEAAKEAERKWLDGYWQQYKEDVAAARGIPLSNFD 253 Query: 206 VLSDGRI--W------TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 +G + + A + +D + +EEV L L + Sbjct: 254 ETLEGLLAKFEQAGGDFANYALQNNWVDALKTREEVRVELTGLVGENE 301 >gi|113954895|ref|YP_731303.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CC9311] gi|113882246|gb|ABI47204.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CC9311] Length = 258 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 134/259 (51%), Gaps = 6/259 (2%) Query: 39 ARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 ARIAI G I S + +++ ++ + AL++ + SPGG+ + I A+ +++ + Sbjct: 2 ARIAIEGAITGSTRRRVLKALKEVQE-REFPALLLRIDSPGGTVGDSQEIHSALLRLREK 60 Query: 97 K-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+ ++AS G + A+ IV+ ++ GSIGV+ + + LD++GV ++V Sbjct: 61 GCHVVASFGNISASGGVYVGVAAETIVSNPGTITGSIGVILRGNNLSKLLDRVGVKFETV 120 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 KS K SP + + +++Q ++DSSY FV V+E R + + +DGR+++G Sbjct: 121 KSGVFKDILSPDRALGAEERELLQALIDSSYEQFVAAVAEGRKLDPSRVREFADGRVFSG 180 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 A+AK +GL+D +G +E L +D+ ++ P+ L ++ +++ Sbjct: 181 AQAKDLGLVDELGDEERARVLAAQLADLDEERCRVVTLGKPRKPLLQGLSGSNLLVRIQE 240 Query: 275 TIPLMKQTKVQGLWAVWNP 293 + + + Q LW ++ P Sbjct: 241 LVTVEMELSGQPLW-LFRP 258 >gi|58038620|ref|YP_190584.1| protease IV [Gluconobacter oxydans 621H] gi|58001034|gb|AAW59928.1| Protease IV [Gluconobacter oxydans 621H] Length = 278 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 137/264 (51%), Gaps = 5/264 (1%) Query: 34 NSPHVARIAIRGQI-EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + PH+ R+AI G I D + + +++ T L++ + SPGG GE + A+++ Sbjct: 14 HRPHIVRLAISGIIKNDVSQTVRALKQAREASDVTGLLLVVDSPGGGVTGGERLHEAVKR 73 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 KPV + ++ ASA Y++S + IVA ++L GSIGVLFQ P V L +LG+ + Sbjct: 74 FAAVKPVAVSMGDVGASAAYMLSVPAQHIVALPSTLTGSIGVLFQRPDVSVGLGRLGIGM 133 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++ S MK + P S + P+ QM+Q +V+ + FV +V+E R++ +K L+DGR Sbjct: 134 DAITSGAMKDQTDPTSALTPEGRQMLQGLVNDLFGQFVSMVAEGRHLSEEKVRSLADGRA 193 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPPKN-YWFC--DLKNLSI 268 +TG +A +GL+D +G ++ L L + + + P + YW+ K L Sbjct: 194 YTGRQAIALGLVDELGDEDAARLWLRKQLKIGNASYPVVPLIPEHSRYWYQWPGKKALLK 253 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWN 292 L ++ + + G A+ Sbjct: 254 GLLGGTFSSVIDREGLDGAVAILQ 277 >gi|193215273|ref|YP_001996472.1| signal peptide peptidase SppA, 67K type [Chloroherpeton thalassium ATCC 35110] gi|193088750|gb|ACF14025.1| signal peptide peptidase SppA, 67K type [Chloroherpeton thalassium ATCC 35110] Length = 605 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 14/269 (5%) Query: 33 DNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 D +A I + G IE + L++ IE + +D+S A+I+ + SPGGS Sbjct: 294 DGGEKIAVINLTGVIEGEMSSASSDGKGGTAALLQSIEAVGKDESIKAMILRVDSPGGSG 353 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A + I + + +KP++ + AAS GY +S +N IVA E ++ GSIGVL PY Sbjct: 354 LASDKILSELILAQKQKPLVVSMSGTAASGGYWVSLNANKIVAGENTVTGSIGVLAAKPY 413 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +K +K+G+ + + F E++P+ + Y FV V+E RN+ Sbjct: 414 IKELQEKIGLERNVLVRGKFADAFNFFDELSPETYAKFDRFIGDFYEEFVEKVAEGRNMT 473 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKNY 258 + ++ GR+WTG AK++GL+D +GG + + +L S+ + + PK + Sbjct: 474 PEAVRKIAQGRVWTGKRAKEIGLVDELGGLQTAVEVAKSLAGIDSASMVTLVRYPRPKTF 533 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 W ++ S++ + + +K+ + L Sbjct: 534 WSTIWEDESLARVSAMFVAAIKKDLYREL 562 Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 117/284 (41%), Gaps = 22/284 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------- 50 K T V++ ++ VY S V V + ++G++ + Sbjct: 11 KIFLTILVLVFILIGIGVYRVLSPSVAIPEQSVLMLDVQGELPEVREDEEFPLFAEAQPL 70 Query: 51 --QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 QEL+ +++ S DD ++V + S + + +AI + K + + Sbjct: 71 ALQELLVTLKKASVDDRIDLIVVRIQSLSTQMAKLDELRQAIADYRKSGKEIWAFLSFPG 130 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S YL++ A N I + S++ G+ + Y + L+K+GV ++ K K+ P Sbjct: 131 DSE-YLLASACNHIYLEKHSMMMLDGLKSERLYFRTPLEKMGVKVQVAKRENYKSAAEPL 189 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGAEAKKVGLI 224 + ++ ++D Y +V V+ SR + V++D + EA ++GL+ Sbjct: 190 LRDAPSAFDLEQRNALLDDFYESYVNAVAASRQMSRAAYERVINDIAFVSDKEASELGLV 249 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 D V ++ + L A ++ K + + Y DL++L + Sbjct: 250 DSVIFFRDLKRQLIAKYEVKASDKDDFFVSGETYRGVDLESLHL 293 >gi|317013199|gb|ADU83807.1| protease IV (PspA) [Helicobacter pylori Lithuania75] Length = 292 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSTPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLNAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|157736751|ref|YP_001489434.1| protease IV (PspA) [Arcobacter butzleri RM4018] gi|157698605|gb|ABV66765.1| protease IV (PspA) [Arcobacter butzleri RM4018] Length = 294 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 11/289 (3%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K KT V L+++ + ++ ++ +I + G I D + +E IE+ Sbjct: 16 LDFITKYFKT-IVFLTIIYVVFFNSDEERISTKSTANLQKIELVGPIIDVSKTLENIEKA 74 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D + ++ + SPGG+ + AI+++K KPV+ + AS Y S ++ Sbjct: 75 KTDTNIKGVLFVVDSPGGAVAPSVEVAYAIKELKQIKPVVVYASGVIASGSYYASIWADK 134 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S+VGSIGV+ Q K +DK+G+ ++VK+ K +P + + +Q Sbjct: 135 IIANHGSMVGSIGVIMQGVNTKELMDKIGIQTQTVKAGKYKESGTPTRKWTEFEEKQLQS 194 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+D +Y+ F+ V+ +RN+ +D +I+T +AK VGL+D V ++L L Sbjct: 195 VIDDTYNMFITDVATARNLDIKNYTSFADAKIFTSKQAKDVGLVDEVANITVAQKTLAEL 254 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 ++ K+ D + L+ + + + V GL A Sbjct: 255 SKVENPVWKKE----------DKFEKFMDKLVSEAVSQISMNFVTGLKA 293 >gi|325106984|ref|YP_004268052.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] gi|324967252|gb|ADY58030.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] Length = 631 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 16/251 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLS 74 + P VA I G I ++ +++ I + + +D A+++ ++ Sbjct: 331 GTKKSRKPQVAVIYATGAIMPGRGTSGPFGEDVIGAESMVDTIRKANENDRVKAIVLRVN 390 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA A + I++A+++V KP + + ++A S GY IS ++ I ++ GSIGV Sbjct: 391 SPGGSALASDLIWKALEEV--DKPFVVSMGDVAGSGGYYISMGADYIFVEPGTITGSIGV 448 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + +KLG++ V S + + MQ +++ Y F R + Sbjct: 449 VGGKLAFEGLFNKLGITTSVVSRGKNSGALSATVPFSESERKAMQKMMNEVYEIFTRKAA 508 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R++ + L+ GRI++G A ++GL+D VG E+ L + K P Sbjct: 509 EGRDMELARLKELAGGRIYSGERAVEIGLVDEVGTLEKAIAKAAELADLEVNDVEKLLLP 568 Query: 255 PKNYWFCDLKN 265 F L Sbjct: 569 KPTSPFEQLFG 579 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 106/220 (48%), Gaps = 13/220 (5%) Query: 45 GQIEDS-QELIERIERISRDDSATALIVSLSSP---GGSAYAGEAIFRAIQKVKNR-KPV 99 G++ +S ++ ER+E+ + DD +++ + +P G+ + I AI KV+ K V Sbjct: 93 GEVTESLNKIEERLEKATNDDGIQGVVLKIDNPIVKLGTIH---EIRHAIAKVRKAGKKV 149 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 ++ S LI+ A + I E+ ++ G+ + + K LDKL + ++ Sbjct: 150 HAQLETAMLS-DLLIASACDEITMPESGMLLITGLRAEVGFYKNLLDKLEIEADILRVGK 208 Query: 160 MKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGA 216 K+ P++ E++P+ Q +++++D Y + V+ ++ESR + + + G + Sbjct: 209 FKSAAEPYTRTEMSPEFRQELEELLDDQYGYIVKTLAESRGLTEQQVTDAIDSGPH-SAE 267 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 A KVGLID V ++ Q++ + ++ + K Sbjct: 268 TAVKVGLIDAVRYPTDLEQAVLEGKDNAEFELVQKYGKKK 307 >gi|227485721|ref|ZP_03916037.1| S49 family peptidase [Anaerococcus lactolyticus ATCC 51172] gi|227236276|gb|EEI86291.1| S49 family peptidase [Anaerococcus lactolyticus ATCC 51172] Length = 327 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 67/223 (30%), Positives = 126/223 (56%), Gaps = 4/223 (1%) Query: 32 EDNSPHVARIAIRGQI---EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +++ + +I++ G I E+S+ +I ++ ++D + +I++++SPGGS Y E I + Sbjct: 56 TNSAEKIRKISLEGVIQGDENSEFVISELKDAAKDPTTKGVILTVNSPGGSVYVSEKIAK 115 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K +K PV + + EMAAS GY IS ++ I A+ +L GSIGV+ + +K Sbjct: 116 EIKSLKAKKIPVYSVMEEMAASGGYYISAPTDRIYASNETLTGSIGVIMGGRSFQGLFEK 175 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ ++V S MK + ++N + +Q +VDS++ FV++VSE R++ L Sbjct: 176 YGIKEQNVVSGKMKDTGTMGRDLNAEEKAYLQALVDSAFGRFVKIVSEGRHMSEKDVRKL 235 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +DGR++ GA+A K GL+D +G + + + ++ Sbjct: 236 ADGRVYDGAQAVKNGLVDKIGDIDMAIADMIKENKLNDPQVVE 278 >gi|332667870|ref|YP_004450658.1| signal peptide peptidase SppA, 67K type [Haliscomenobacter hydrossis DSM 1100] gi|332336684|gb|AEE53785.1| signal peptide peptidase SppA, 67K type [Haliscomenobacter hydrossis DSM 1100] Length = 594 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 11/267 (4%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A + G + D + + IE I DD A+++ ++S GGSA A Sbjct: 303 SADNKIAVLYAEGTVLDGKGANGTIGDKRYVSAIEDILEDDKIKAIVLRVNSGGGSALAS 362 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I+ A+ K K KP+I + + AAS GY I+C ++ I A ++ GSIGV P ++ Sbjct: 363 ENIWYALSKAKEAGKPLIVSMGDYAASGGYYIACMADSIYAEPNTITGSIGVFRMVPSIE 422 Query: 143 PFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + +KLG+++ SVK+ P + +++ + + Q + Y F++ V++ R + Sbjct: 423 KMMANKLGITMDSVKTGPFALGLNVMQDMSEEEARRAQISTEEMYRLFIKRVADGRKMKP 482 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + ++ GR+W+G +AK++GL+D +G +S LG + R + + Sbjct: 483 EAVNEIAQGRVWSGVDAKRIGLVDKLGDLNAAIKSAAKLGKIKDYRTVTYPSIKDPMQQL 542 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLW 288 + L S E + + Q + L Sbjct: 543 LEEFLGEGSDDEAKMGKIMQKEFPELV 569 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 88/200 (44%), Gaps = 7/200 (3%) Query: 52 ELIERIERISRDDSATALIVS--LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++ + I R + DD+ +++ ++S G A A + +AI K + + ++ Sbjct: 83 DVADAIRRAADDDNIKGILLEPEMASLNGFASA-RILRQAIADFKKKGKFVVAHGKIFMR 141 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS- 168 Y ++ ++ + + V G Q + K LD+LG+ ++ + K P+ Sbjct: 142 GSYYLASVADEVYINPSGYVEINGFAVQQMFYKRMLDQLGIKMQIYYAGKFKGATEPYRL 201 Query: 169 -EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDV 226 + +P+ ++ + Y F+ +++SR + + ++ G T +A + GL D Sbjct: 202 EKFSPENKLQYKEFLADFYDVFLEDLAKSRKMSSAQLRSVINQGVANTPEKAVEYGLFDK 261 Query: 227 VGGQEEVWQSL-YALGVDQS 245 V ++E+ L LG+D Sbjct: 262 VLYRQELIVQLRKKLGLDAD 281 >gi|325266561|ref|ZP_08133238.1| signal peptide peptidase SppA [Kingella denitrificans ATCC 33394] gi|324982004|gb|EGC17639.1| signal peptide peptidase SppA [Kingella denitrificans ATCC 33394] Length = 336 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 28/288 (9%) Query: 10 TRYV-MLSLVTLTVVYFSWSSHVED---------NSPHVARIAIRGQIEDSQEL------ 53 R+V +L + + + PH A I + G I + Sbjct: 48 WRFVALLVFIAFIAGLRDSGTQESEQAAFSAAAARGPHTAVIDLNGTIGGDNRISQVDML 107 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASA 110 + +E R+ + A+I+ +SPGGS F I+++K PV +M AS Sbjct: 108 RQGMEAAYRNKNVRAIIIHANSPGGSPVVSNTAFSEIRRIKAEHANIPVYVVAKDMCASG 167 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ A++ I A +SLVGSIGV+ ++KLG+ + + K PF Sbjct: 168 CYYIAAAADKIFADPSSLVGSIGVIGSSFDATGLIEKLGIRRRVRIAGDNKGMGDPFVPE 227 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPY--DKTLVLSDGRIWTGAEAKKVGLIDVVG 228 P+ + Q++++ + F++ V E R + + GRI+TG +AKK GLID G Sbjct: 228 TPEQQAIWQNMLNQIHGEFIKAVREGRGKRLMEKEFPDMFSGRIFTGIDAKKAGLIDDFG 287 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 V + + + ++ P KN L N +++ +E+T+ Sbjct: 288 NVYSVARDVV------KAPNLVNYTPEKND-LASLLNRHLNNQMEETV 328 >gi|296125359|ref|YP_003632611.1| signal peptide peptidase SppA, 36K type [Brachyspira murdochii DSM 12563] gi|296017175|gb|ADG70412.1| signal peptide peptidase SppA, 36K type [Brachyspira murdochii DSM 12563] Length = 324 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 20/267 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSL 73 +S + +A I + G I + +EL+E E +D A+++ + Sbjct: 29 NSISANTQEGIAIIDLTGVITHAKRKTSIGLEYPSVTEELMEDFEYYLKDPKVKAIVLQV 88 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 SPGG+ + E + +Q +K + KP++ MAAS GY +S ++ I A E++L GS Sbjct: 89 DSPGGALTSCEEALKYLQDLKAKYPKPIVASFRSMAASGGYYMSMIADKIYANESTLTGS 148 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ Q+ V +DK GV + ++KS K SPF E + QD+ F Sbjct: 149 IGVISQFFNVSGLMDKYGVKMYTIKSGRNKDSLSPFREPREDELAYWQDMTYEFVAQFTN 208 Query: 192 LVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +V ++R + DGR+++G A +VGLID +G ++ + LG + Sbjct: 209 VVEQARGDKIKGNREEIFDGRVFSGKRALEVGLIDAIGTLQDAIKDAAKLGGIEDEEPYI 268 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIP 277 P + +L N+ S + E+ P Sbjct: 269 IKKPQQK---DNLLNMLFSGISENIKP 292 >gi|91203949|emb|CAJ71602.1| similar to signal peptide peptidase [Candidatus Kuenenia stuttgartiensis] Length = 328 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 119/249 (47%), Gaps = 7/249 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAAS 109 + E + D A+++ ++SPGG A + ++ I + K +K VI + ++ AS Sbjct: 80 RVKEELTLAKMDKQVKAILLRINSPGGKVTASDMMYYEIMRFKEETKKKVIACIMDIGAS 139 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ +++ I+A T++ GSIGV+ ++ L K+G++ SVK+ K SP + Sbjct: 140 GGYYVAASADKIIAHPTTVTGSIGVIMINLSIEGLLQKVGIADASVKTGEHKDMGSPLKK 199 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + ++ +++++ Y F+ ++ E+R I +K L+DGRI++ +A + GLID +G Sbjct: 200 MTEEDRRIFSEILNAMYERFLCVIEENREGISMEKIRELADGRIYSAQQALENGLIDQIG 259 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPP--KNYWFCDLKNLSIS--SLLEDTIPLMKQTKV 284 ++ R I P KN + L S +L I + Sbjct: 260 YLDDAVSIAKKETNLTEARVILYHRPGSYKNNIYSQLTGASAGNINLFNIDIKTFIHSGA 319 Query: 285 QGLWAVWNP 293 +W P Sbjct: 320 PSFMYIWMP 328 >gi|167623955|ref|YP_001674249.1| signal peptide peptidase SppA [Shewanella halifaxensis HAW-EB4] gi|167353977|gb|ABZ76590.1| signal peptide peptidase SppA, 67K type [Shewanella halifaxensis HAW-EB4] Length = 613 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 16/269 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + V I +G I + + E + + DDS A+++ + SPGGSA+A E Sbjct: 324 NDKVGIIVAKGNILNGSQPAGQIGGKSTSELLRQARFDDSVKAVVLRVDSPGGSAFASEE 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KP+I + AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQEVLAIKAANKPIIVSMGSYAASGGYWISASADYIYATPTTLTGSIGIFGMVTTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV+ R++ D Sbjct: 444 LASIGVHTDGVGTSEWAGF-SVTKGLSPQIQAIIQRHIERGYQDFISLVASERDMSLDYV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+WTG +A ++GL+D +G ++ + + I+ P+ + + Sbjct: 503 DSIAQGRVWTGRKALELGLVDGLGELQDAVTKAAQMAKLEQYDTEVIERELSPQEQFIQE 562 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + S SS + + + + ++ + + W Sbjct: 563 ML-ASASSYMPQS--FAQSSVLETVLSQW 588 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 91/273 (33%), Gaps = 54/273 (19%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ------------- 51 L+K+ + ++ + +V + VE + + G I D + Sbjct: 22 LRKLFLNLIFFGVIAIIIVSLTTDDGVEVEDGSALVLNLSGVIVDQKRQVDPIEAAMKSG 81 Query: 52 ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA-----IFRAIQKVK 94 +++ IE + D +++ L G + I AI+ K Sbjct: 82 NEADGSGEILLADVLTVIENAATDTRINQMVLDL----GMLHGTGISKLQSIGNAIESFK 137 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVS 151 + Y ++ ++ + GS+ G+ Y K LDKL ++ Sbjct: 138 ATGKTVVANGNWYGQNQYFLASFADKVYLNPQ---GSVEIEGLARYRLYFKSALDKLKIN 194 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + K+ PF +++ A + +++ + + V+ +R I + + +D Sbjct: 195 AHVFRVGTFKSAVEPFIRDDMSDAAKEANLVLLNDLWQSYADTVAANRGIDSNNLSLSAD 254 Query: 210 ----------GRIWTGAEAKKVGLIDVVGGQEE 232 G+ + A + +D + +E Sbjct: 255 NYLAELDKANGK--SAEMALNMKWVDGLKTTDE 285 >gi|281419691|ref|ZP_06250690.1| signal peptide peptidase SppA [Prevotella copri DSM 18205] gi|281406220|gb|EFB36900.1| signal peptide peptidase SppA [Prevotella copri DSM 18205] Length = 594 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 11/276 (3%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 VY+ S V +P + QI S ++I+ ++ ++ + A+++ ++S GG A Sbjct: 304 IAVYYCQGSIVRMETPSIY--DSEQQIV-STKVIKDLQELADNSQVKAVVLRINSGGGDA 360 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+RA++++ +KPV+ + MAAS Y +S + I+A T+L GSIG+ P Sbjct: 361 YASEQIWRAVKELNKKKPVVVSMGGMAASGAYYMSMGAQYIMAQPTTLTGSIGIFGALPD 420 Query: 141 VKPFL-DKLGVSIKSVKSSPMKAEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + KLG VK++ S + + + MQ+ V+ Y F V+E R Sbjct: 421 FSDLMTKKLGFKYDEVKTNRNSTYASAGMSRPWSAEEIATMQNYVNRGYSLFRNRVAEGR 480 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + ++ ++ GR+W G +AKK+ LID GG + L S + ++ P Sbjct: 481 KMSTEQVEKIAQGRVWLGTDAKKIKLIDGFGGLSDAIDKAAELAHLSSYQAVEY--PALA 538 Query: 258 YWFCDLKNLSI---SSLLEDTIPLMKQTKVQGLWAV 290 W L +++ + L++ + L Q + Sbjct: 539 GWMEQLLDMAGGNKGTYLDEQLRLALGDLYQPFIMI 574 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 95/276 (34%), Gaps = 36/276 (13%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE------------ 52 L +L + + + S +S V + ++GQIED E Sbjct: 15 LFAFGLIMTILGFICIIGMVASSNSKPALKDNSVMVMKLQGQIEDRTEDNWLGELTGEQF 74 Query: 53 -------LIERIERISRDDSATAL-----IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 ++ I + +D + I+ + I A+ K I Sbjct: 75 NNIGMNRILSSIRKAKNEDKVKGIYLETGILETD-----YATLQEIRNALADFKKSGKWI 129 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + + GY ++ +N + V G+ Q Y+K K GV VK Sbjct: 130 IAYGDALSQGGYYLASVANKVYVNPEGNVDWHGIASQPQYIKDVAAKFGVHFTVVKVGKY 189 Query: 161 KAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAE 217 K+ ++E ++ + + + + + VS+SRNI D +DG ++ + Sbjct: 190 KSYTETYTEDKMSDANREQVSRYISGLWLQMLGDVSKSRNISKDSLNRYADGLMVFDDTK 249 Query: 218 AKK-VGLIDVVGGQE---EVWQSLYALGVDQSIRKI 249 K ++D + +V + L D +I ++ Sbjct: 250 LLKSRKMVDGFCYYDEIRDVVKKQLGLKADDTINQV 285 >gi|283955437|ref|ZP_06372935.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 414] gi|283793064|gb|EFC31835.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 414] Length = 298 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 2/275 (0%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + + +K I T + L+ + + S + N ++ RI ++G+I DS ++E+I Sbjct: 11 LGYGIKFINTYFKTFVLLLIVIWILMPSVNSSSNLANLERIDLKGEIFDSSAVLEKIINA 70 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D+S ++ + SPGG+ + AI+ +KN+KPV+ AS YL +N Sbjct: 71 KNDNSIKGVLFVIDSPGGAFAPSMELALAIKDLKNKKPVLVYASGTMASGSYLAGVGANK 130 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S +GSIGV+ Q + +KLG+ +++++ K+ + + +Q Sbjct: 131 ILANPASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWSEDERNFLQG 190 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++D SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 191 LIDQSYDLFTGFVAKERTLDLNKKNQWANARVFLAAKAKELGLIDGLSNYENAKKELEKL 250 Query: 241 G-VDQSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 V + K +D ++ N +L SL+E Sbjct: 251 ANVSNPVWKEEDKFDKFLNRLEGQASSLISKSLIE 285 >gi|328954249|ref|YP_004371583.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] gi|328454573|gb|AEB10402.1| signal peptide peptidase SppA, 36K type [Desulfobacca acetoxidans DSM 11109] Length = 338 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 6/246 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAAS 109 L E +++ + D AL+V L SPGG+ A + I+ +Q+ K + P++ V +AAS Sbjct: 90 RLKEELQKAAADRRLKALVVRLHSPGGTVAAADLIYHELQQFKQQHRLPLVVSVLGLAAS 149 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY ++ A+++IVA TSL+GSIGV+ +K L++ GV + VK+ +K SPF Sbjct: 150 GGYYLAQAADVIVAQPTSLIGSIGVIALKFNLKGLLNRFGVETELVKTGRLKDLWSPFRP 209 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++MQ ++D + FV +V+ RN L DGR++T +A + L+D +G Sbjct: 210 ATAEEARIMQALLDDFHRRFVAVVAAGRNFDPATAQRLGDGRLFTATQALDLNLVDQLGY 269 Query: 230 QEEVWQSLYALGVDQSIRKIKDWN--PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 ++ + L ++ R I + + +L D P+ + Sbjct: 270 LDDAFNRAKELAGIETARIIMYHTADSYRGNVYATPMPQQGLGVLPD--PVSPTLALPQF 327 Query: 288 WAVWNP 293 + +W P Sbjct: 328 YYLWWP 333 >gi|15827982|ref|NP_302245.1| protease IV, signal peptide peptidase [Mycobacterium leprae TN] gi|221230459|ref|YP_002503875.1| protease IV, signal peptide peptidase [Mycobacterium leprae Br4923] gi|2344854|emb|CAB11456.1| endopeptidase IV [Mycobacterium leprae] gi|13093535|emb|CAC30793.1| protease IV, signal peptide peptidase [Mycobacterium leprae] gi|219933566|emb|CAR71935.1| protease IV, signal peptide peptidase [Mycobacterium leprae Br4923] Length = 602 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 21/276 (7%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 + P V + + G I + + + ++ DDS +A+++ ++SPG Sbjct: 307 SKPTVVVVTLEGPIVNGRGGPQFLPFGISTGGGDTIAAALREVAADDSVSAIVLRVNSPG 366 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R +++ ++R KPV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 367 GSVTASETIWREVKRARDRGKPVVVSMGAVAASGGYYVSVGADEIVANPGTITGSIGVIT 426 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ +LGV +V+++ S P+ + D Y F+ V+E Sbjct: 427 GKLVIRDLKGRLGVGSDTVRTNANADAWSANVPFTPEQHTHREAEADLCYADFLERVAEG 486 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + D ++ GRIWTGA+A + GL+D +GG + L + ++ + P Sbjct: 487 RGMTTDAVDDVARGRIWTGADALERGLVDELGGLVTAVRRAKVLAGLDADVDVRIVSYPG 546 Query: 257 NYWFC----DLKNLSISSLLEDTIPLMKQTKVQGLW 288 + + ++ L D + + V G+ Sbjct: 547 SSLLDMVRPRASSQPGAASLPDAVATLLGRSVAGIL 582 Score = 96.4 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 8/212 (3%) Query: 63 DDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 D +I + SP A + + A+ KP + + Y ++ A Sbjct: 77 DPRVAGMIARVQLGASP---PAAVQELREAVATFSAVKPSLAWAETYPGTLSYYLASAFG 133 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQM 177 + + VG +G +++ L K+G+ + V K+ + F+E + Sbjct: 134 EVWMQPSGSVGLVGFASNATFLRDVLAKVGIEAQFVARGEYKSAANLFTEGGFTDAHREA 193 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + +++S + ++ESR I L+D +A GL+D +G ++E + + Sbjct: 194 VSRMLESLQGQVWQGIAESRRIDPAALNPLADRAPLLRDDAVASGLVDRIGFRDEAYARI 253 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 L +SI + L L +S Sbjct: 254 AELVGAESITPNSSEPQARTEANDGLPRLYLS 285 >gi|260753451|ref|YP_003226344.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552814|gb|ACV75760.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 637 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 11/272 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSA 66 S +++ F ++ + + + G+I D + + I Sbjct: 297 SFKAVSLASFIGANPPSSAGSAIGVVTVSGEIVDDETRSGQVSGSTISSLILDTLAKGDI 356 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAE 125 AL+V + SPGGS A E + AI K + PVI + +AAS GY IS ++ I A Sbjct: 357 KALVVRVDSPGGSVSAAEQMRSAILAAKAKGLPVIVSMGSVAASGGYWISTPADKIFADP 416 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +++ GSIGV P + L K+G+S VK++P+ +P F P+ Q+MQ VD+ Sbjct: 417 STITGSIGVFSLIPTFQQTLHKIGLSADGVKTTPLSGQPDVFRGTTPEFDQLMQFGVDTI 476 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQ 244 Y F +V+ SR++P +K +++GR+W+G +AKK+GL+D G ++ +D Sbjct: 477 YDRFTSIVASSRHLPLEKVREIAEGRVWSGVDAKKIGLVDQYGSLQDAVTEAAKRAHLDP 536 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 S ++ + ++ LKNL + I Sbjct: 537 SHTHMQFIDEEPSFVEMILKNLFQHQASDAKI 568 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 20/204 (9%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAY--AGEAIFRAIQKVKNRKPVITEVHEM 106 ++++ +E+ +R+ A+++ LS S GG A A + ++ KPV++ Sbjct: 91 RDVVYGLEQAARNPKIKAVVLDLSDFSGGGRAAISAVDNALDKVR--AAGKPVLSFAGFY 148 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A Y I+ I V +GV Y K LDKLGV K + K+ P Sbjct: 149 N-DARYRIAAHGTEIWLPNLGEVALLGVGGNQLYYKGLLDKLGVETKIYRVGRFKSFVEP 207 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--------DGRIWTGA 216 F +E +P A Q + +S + ++ ++ +R P + G + Sbjct: 208 FTRTEQSPDAKAANQALANSLWQTTLQDIAHAR--PKAHVAEWALNPTSFLKSGHSF-AE 264 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 A+ G+ID +G + + +L Sbjct: 265 LAQSAGIIDHIGNAIDFGTRVASL 288 >gi|68171775|ref|ZP_00545120.1| Peptidase S49, SppA [Ehrlichia chaffeensis str. Sapulpa] gi|88658399|ref|YP_507221.1| signal peptide peptidase SppA [Ehrlichia chaffeensis str. Arkansas] gi|67998800|gb|EAM85507.1| Peptidase S49, SppA [Ehrlichia chaffeensis str. Sapulpa] gi|88599856|gb|ABD45325.1| signal peptide peptidase SppA [Ehrlichia chaffeensis str. Arkansas] Length = 288 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 166/264 (62%), Gaps = 3/264 (1%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDSQELIERIERISRDDSATA 68 + M+ ++ + V Y S ++ ++A++ I G+IE ++E+ +++I+ D+ T Sbjct: 21 FAFFMIFVLLMLVNYIDISKISSFLDNEYIAKVNIEGKIETNEEMDALLKKIAEDNHVTG 80 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 LI++++SPGGS E +++ I+ V KPV+ +++ AAS GY+ + A++ I+A T++ Sbjct: 81 LILNINSPGGSVTGSEILYQNIRNVSKNKPVVALLNDFAASGGYMTAIAADYIIARHTTI 140 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGVL QY + P +K+G+S+KS+KSS +KAE SPF E+ + + ++ ++ +SY + Sbjct: 141 TGSIGVLMQYIGINPLAEKMGISLKSIKSSNLKAETSPFEELTEEKEESIRRIIKNSYDY 200 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV +V++ R + D+ L +++G I+TG+EA +GL+D +GGQ+E ++ + S +K Sbjct: 201 FVDIVADRRKMEKDQVLKIANGSIYTGSEALSIGLVDQIGGQDEAMNWFHSQNI--STQK 258 Query: 249 IKDWNPPKNYWFCDLKNLSISSLL 272 +K + K+ + + IS ++ Sbjct: 259 VKVLSKKKHKSIIENVSSFISQVV 282 >gi|188528198|ref|YP_001910885.1| protease IV (PspA) [Helicobacter pylori Shi470] gi|188144438|gb|ACD48855.1| protease IV (PspA) [Helicobacter pylori Shi470] Length = 292 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|297380616|gb|ADI35503.1| signal peptide peptidase SppA, 36K type [Helicobacter pylori v225d] Length = 292 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESTPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|254423024|ref|ZP_05036742.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7335] gi|196190513|gb|EDX85477.1| signal peptide peptidase SppA, 67K type [Synechococcus sp. PCC 7335] Length = 615 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 12/271 (4%) Query: 30 HVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + ++ +A + +G I S+ L + + DD A+++ ++SPGGS Sbjct: 320 NSSEDKDAIAVVYAQGNIIVGEGSVPGAITSEGLSATLRDMREDDDIKAVVLRVNSPGGS 379 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E I ++ + + KP++ + + AAS GY+I+ I+A+ T++ GSIGV Sbjct: 380 ATASEIIANEVRLLADEKPLVVSMGDYAASGGYMIAAPGAKILASPTTITGSIGVYGLLL 439 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + ++ G++ VK++ + + +++ QD VD+ Y F LV+E R+I Sbjct: 440 NFQEIANENGITWDDVKTAQLAGMGTVSRPKTASELKVQQDYVDTLYTRFTSLVAEGRDI 499 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + ++ GR+WTG EA L+D +GG + +L A K++++ P + Sbjct: 500 SMARVGQVAQGRVWTGEEAINADLVDELGGLNDAI-ALAAQTAKIEEFKVEEY-PRIPSF 557 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 L + + + +P K L + Sbjct: 558 EEQLLDSLFGAEMITRLPWNKDPLTDQLLKL 588 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 26/198 (13%) Query: 62 RDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNR-KPVITEVHEMAASAG----- 111 DD + + ++ G G + I A++ K KP++ S G Sbjct: 100 EDDRISGIYLT-----GMPAEGLATLKEIRAALKDFKTSGKPILAY------STGLKERD 148 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV- 170 Y ++ ++ ++ A L+ G + ++ L K GV ++ V++ K+ PF+ Sbjct: 149 YYMASVADDLLLAPVGLLEINGFRAETQFLGNALKKYGVGVQVVRAGRYKSAVEPFTRSQ 208 Query: 171 -NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVV 227 +P+ Q + +V S + F+ V++ R + + +D G I +A GL+D + Sbjct: 209 SSPEEKQQTEVLVTSLWQDFLNTVTDEREVTPTQMQTYADEVGLI-EPEQALASGLVDRL 267 Query: 228 GGQEEVWQSLYALGVDQS 245 G E+ L L + Sbjct: 268 GFYTEMLSELKKLAGEAD 285 >gi|157413729|ref|YP_001484595.1| signal peptide peptidase SppA [Prochlorococcus marinus str. MIT 9215] gi|157388304|gb|ABV51009.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9215] Length = 269 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 124/222 (55%), Gaps = 7/222 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +++ +++I D ALIV + SPGG+ + I+ AI Sbjct: 8 KSKKRMARIVIDEPITSSTRVSVLKALKQI-EDREFPALIVRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G Sbjct: 67 KRLKDKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + ++Q ++D SY F V+E RN+P + +D Sbjct: 127 IKFETVKSGVFKDILSPDKPLSDEGRDLLQGLIDESYKQFTEAVAEGRNLPVEDVRKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA--LGVDQSIRKI 249 GRI+TG +AK +GL+D +G E V + L A + +D I+ + Sbjct: 187 GRIFTGTQAKDLGLVDEIGD-EFVARELAAEMVNIDPKIQPL 227 >gi|189502064|ref|YP_001957781.1| hypothetical protein Aasi_0656 [Candidatus Amoebophilus asiaticus 5a2] gi|189497505|gb|ACE06052.1| hypothetical protein Aasi_0656 [Candidatus Amoebophilus asiaticus 5a2] Length = 513 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 17/238 (7%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPH-------VARIAIRGQIEDSQE---------LI 54 R + V + Y + ++ ++ PH +A + G I D + + Sbjct: 273 RAKLKLAVATKINYIDFDTYHKNKQPHTKQHNNRIAVLIASGAIVDKEIGPNYITTSIFV 332 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 + ++ D A+++ ++SPGGSA A + I++ + + KP++ + ++AAS GY + Sbjct: 333 RMLRKLREDPDVKAIVLRINSPGGSALASDTIWKELMLTRACKPIVASMSDIAASGGYYL 392 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPK 173 + + I+A T++ GSIG+ Y V L KLG+ VK+SP SP + Sbjct: 393 AAGCDYILAHPTTITGSIGIYGLYFDVHALLKNKLGIVGDVVKTSPSADIFSPVRPFSEH 452 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++Q ++S Y F+ V+ R + L++GR+W+G+ AK+ GL+D +GG E Sbjct: 453 EKNIIQQHIESGYDNFLDKVATGRQMKKVDVARLAEGRVWSGSLAKEHGLVDQLGGLE 510 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 14/208 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRKPVITEVHEMA 107 + I D + + + G AG + A+Q K I E Sbjct: 84 TIKNAIRSAQEDRYIAGIYLEV----GELVAGWATLAELRGALQAFKATGKFIVAYGENY 139 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S Y ++ ++ IV G+ + K LDKL ++ + + K+ PF Sbjct: 140 NSKSYYLASLADEIVLHPAGNFIFTGLKLTVLFYKQLLDKLDIAPQIFRVGRYKSAVEPF 199 Query: 168 S--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLI 224 ++ + + + ++++ Y ++ V+ +N+ +++ T EA K GL+ Sbjct: 200 MQCSMSEASKEQNRVLLNNIYDHLIQTVAIHKNLDPSVLKSMANTLAITQPQEAYKAGLV 259 Query: 225 DVVGGQEEV---WQSLYALGVDQSIRKI 249 VG ++ ++ L V I I Sbjct: 260 TQVGYFNDIEALIRAKLKLAVATKINYI 287 >gi|42522622|ref|NP_968002.1| signal peptide peptidase [Bdellovibrio bacteriovorus HD100] gi|39575154|emb|CAE78995.1| signal peptide peptidase [Bdellovibrio bacteriovorus HD100] Length = 322 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 132/294 (44%), Gaps = 13/294 (4%) Query: 5 LKKIKTRYVML----SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 KK+ +++ +L+ ++ +F + + + G I + ++ I+ +++ Sbjct: 6 FKKLIIIFLVFVGLGALLKMSGDFFGSEDKRVTAKNTILHLEMNGVILNGKKFIKNLKKY 65 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCAS 118 DD A+++S++SPGGS + +F I++V++ +KPV+ + AS Y + A Sbjct: 66 RDDDKVKAILISINSPGGSVGPSQELFAEIKRVRDEIKKPVVCVSTGVMASGAYYAAVAC 125 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + IV A +LVGSIGV+ ++ ++ D +S S+ S K + + + + Sbjct: 126 DKIVVAPGALVGSIGVIMEFANLEKLYDWAKISRYSITSGKFKDSGAEYRPMREDERSLF 185 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ--- 235 Q ++D Y F V+ R + + +DGR++TGA A KVG D G ++ + Sbjct: 186 QSMIDEVYAQFKGTVATERKLKEEVVAEYADGRVFTGATAVKVGFADQEGYFDDAVKLAA 245 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + LG + + ++ P K DL L K + A Sbjct: 246 EIAKLGDNYDVFEV----PKKKVSIFDLGGGDTEDDLNSMAEFADVLKGKSFGA 295 >gi|152979231|ref|YP_001344860.1| signal peptide peptidase SppA, 67K type [Actinobacillus succinogenes 130Z] gi|150840954|gb|ABR74925.1| signal peptide peptidase SppA, 67K type [Actinobacillus succinogenes 130Z] Length = 625 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 112/215 (52%), Gaps = 11/215 (5%) Query: 37 HVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++A + + G I D + +++ +++ D+ AL++ ++SPGGSA+A E I Sbjct: 329 NIAVVNVEGTIIDGESDDQNVGGDTVVKLLQQAQTDERIKALVLRVNSPGGSAFASEKIR 388 Query: 88 RAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + + K KPV+ + MAAS GY IS ++ IVA + +L GSIG+ +P + Sbjct: 389 QELTALQKQGKPVVVSMGGMAASGGYWISSTADYIVADKNTLTGSIGIFAMFPTFEKTAK 448 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 +GV+ + +SP+ S S + + Q ++ Y F+R+VSE R + ++ Sbjct: 449 NIGVTADGISTSPLADISSLESP-SKVVKDVYQLEIEHGYDEFLRVVSEGRRLDKEQVDQ 507 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G++W G +A K L+D +G + + L Sbjct: 508 VAQGQVWLGQDAAKYHLVDALGNFDAAVNKAFELA 542 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 89/234 (38%), Gaps = 31/234 (13%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQE-------- 52 + V+ +++L+L +V+ + + A + + G + D+++ Sbjct: 20 DVVMNLFFLAFILLALTVFGLVFSYKAGTTQLVGNQGALLLNLDGYLADNRDESLTWQKA 79 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ +E D+ L++ L+ G+ + + AIQ K Sbjct: 80 LQEVNSNKIPMQISTFDVVYAVENAKDDERIKGLVLDLNFFEGADLPALDYVGNAIQHFK 139 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPVI A Y ++ ++ I V G+ + Y K LDKL ++ Sbjct: 140 TSGKPVIVYADNY-TQAQYYLASFADEIYLNPAGAVDIRGMTAKNLYFKSMLDKLDITPH 198 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + K+ PF +++P+A V+ + + + V+++R I + L Sbjct: 199 VFRVGTYKSAVEPFLRDDMSPEAKANAALWVNGMWDNYKQQVAQNRTIQTSQIL 252 >gi|317178138|dbj|BAJ55927.1| protease IV [Helicobacter pylori F16] Length = 292 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + ++RI Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDRI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|254468276|ref|ZP_05081682.1| peptidase S49 [beta proteobacterium KB13] gi|207087086|gb|EDZ64369.1| peptidase S49 [beta proteobacterium KB13] Length = 316 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 16/283 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 K + + L + V + A + + G I ++++ I+ ++ Sbjct: 32 WSNFFKIVTFLYLFILLFIFLGKPGDQVSASGEFTALVKLNGIISSESEINAEDAIKSLQ 91 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLIS 115 + ++D LIVS++SPGGS I I+++K KP+ V ++ AS GY I+ Sbjct: 92 KAMKNDGTKGLIVSINSPGGSPVQSAMINDEIKRLKLIYPEKPIKVVVEDVCASGGYFIA 151 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A ++S+VGSIGVL ++KLG+ + + + K PF ++P Sbjct: 152 VAADDIYANKSSIVGSIGVLMNGFGFDQAIEKLGIERRLMTAGKNKGILDPFQPIDPTHR 211 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q ++D + F+ V E R + + G W G A K+GLID G + + Sbjct: 212 KHVQQLLDEVHQQFITAVKEGRGDRLSEDQSIFSGLFWNGESAYKLGLIDGFGTVSSIAK 271 Query: 236 SLYALGVDQSIRKIKDWNPPKNY--WFCDLKNLSISSLLEDTI 276 + K+ D+ + + F I S+L + Sbjct: 272 DVIG------YEKVIDFTTYETFADRFAKKLGAGIGSVLHSQV 308 >gi|15612393|ref|NP_224046.1| putative protease IV [Helicobacter pylori J99] gi|4155951|gb|AAD06917.1| putative PROTEASE IV [Helicobacter pylori J99] Length = 292 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 124/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVDDVAKARKLNAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|27228584|ref|NP_758634.1| putative peptidase [Pseudomonas resinovorans] gi|219857006|ref|YP_002474038.1| probable peptidase [Pseudomonas sp. CA10] Length = 349 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 22/291 (7%) Query: 9 KTRYVMLSLVTLTVVYFSWSS--HVEDNSPHVARIAIRGQIEDSQE-----LIERIERIS 61 R L +V V + V + P A+I +RG I D +E L + + Sbjct: 66 FFRLATLGIVVTAFVVGGRADLDGVGADVPVTAKIKVRGVIADGEEASAENLKRSLGKAF 125 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCAS 118 +++ A+I+ ++SPGGS ++ +++++ P V + ++ AS GY I+ A+ Sbjct: 126 ENENTKAVILEINSPGGSPVQAGHVYDEVRRLRALHPDTKVYAVITDLGASGGYYIASAA 185 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I A + SLVGSIGV + KLGV ++ S KA F NP+ + Sbjct: 186 DEIFADKASLVGSIGVTAASFGYVELMQKLGVERRAYTSGEHKAFLDQFQPQNPEERKFW 245 Query: 179 QDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + V+ ++++ F+R V R + + L G IWTG +A +GL+D +G + V + Sbjct: 246 EGVLKTTHNQFIRSVEAGRGDRLKAKENPDLYSGLIWTGEQAVGLGLVDRLGDSDYVARE 305 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + KI D+ +N D I + + D + L + GL Sbjct: 306 VVG------VSKIVDFTRKQNPL--DRFASKIGASVADQLSL--RLGFDGL 346 >gi|210135599|ref|YP_002302038.1| signal peptide protease IV [Helicobacter pylori P12] gi|210133567|gb|ACJ08558.1| signal peptide protease IV [Helicobacter pylori P12] Length = 292 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|56417009|ref|YP_154083.1| protease IV [Anaplasma marginale str. St. Maries] gi|222475377|ref|YP_002563794.1| protease IV (sppA) [Anaplasma marginale str. Florida] gi|56388241|gb|AAV86828.1| protease IV [Anaplasma marginale str. St. Maries] gi|222419515|gb|ACM49538.1| protease IV (sppA) [Anaplasma marginale str. Florida] Length = 293 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 133/210 (63%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + +VAR+ I G+I S+ + R++ DS AL++ + SPGG+ EA+++ Sbjct: 45 GTLRRTHDYVARVRISGEIGRSRAREAMLARLAESDSVKALVLRIDSPGGTVGDSEALYQ 104 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I+++ +KPV+ + +AAS GY+ + A++ +VA ++ GSIGV+ QY V KL Sbjct: 105 QIREIALKKPVVAVLGNVAASGGYMAAIAADHVVARHGTITGSIGVVSQYIGVAEAAGKL 164 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+++KS+K++P+K+ SP E++P+ ++Q VVD + +FV LV+E R DK +S Sbjct: 165 GIALKSIKTAPLKSNMSPLEELSPEGESIIQGVVDDFHVFFVGLVAERRGFTPDKVSAVS 224 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 DGRI+TGA+A + GLID +GG++E + L Sbjct: 225 DGRIYTGAQALQAGLIDAIGGEKEALEWLK 254 >gi|149176651|ref|ZP_01855263.1| Periplasmic serine protease [Planctomyces maris DSM 8797] gi|148844530|gb|EDL58881.1| Periplasmic serine protease [Planctomyces maris DSM 8797] Length = 603 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 17/244 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSATALIVS 72 SS + P +A I G I S I+ + + + DD A++V Sbjct: 300 SSQRIGSGPRIAVIYATGAIMSGSSAQGSLLGGNVLGSDTFIKAVHKAADDDQVKAIVVR 359 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGGSA A + ++RA+++ KP++ + ++AAS GY IS + I A +L GSI Sbjct: 360 VDSPGGSALASDLMWRALEE--AGKPIVVSMGDVAASGGYYISMGAERIFAEPGTLTGSI 417 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ ++ K+G++ + SP + + ++++ Y F Sbjct: 418 GVVGGKLAIEGLYKKIGITTSVISRGSNSGTFSPLNGFTESERVAVTGMLNAIYKQFTEK 477 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + R + Y+K L+ GR++TG A K+GL+D +G +E LG + K + Sbjct: 478 AAAGRKMDYNKLEALARGRVYTGEMALKLGLVDQLGTLDEAIDHARKLGKIKEGEKFEKL 537 Query: 253 NPPK 256 P+ Sbjct: 538 ILPR 541 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 105/219 (47%), Gaps = 11/219 (5%) Query: 45 GQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKN-RKPV 99 G + +S +++ R+E+ S D S T +++ G+ + +AIQKV+ K V Sbjct: 63 GDVTESLSKVVSRLEKASEDKSLTGVVLHF---KGTELGWAKLNELRQAIQKVRKSDKKV 119 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + YLI+ A + IV E++ + +G+ + + K D L + ++ Sbjct: 120 FAWIE-TGMTKDYLIASACDQIVMPESASLILLGLRAEVSFYKNLFDILDIKPDILRVGK 178 Query: 160 MKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K+ P++ E++ + M+ ++D+ + ++S SR + +K +G + AE Sbjct: 179 YKSAAEPYTRTEMSEAFREEMEALLDNYFGQITGMISASRGLSAEKVEAAINGGPYMAAE 238 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 AKK+GLID + ++++ + L ++ IK + + Sbjct: 239 AKKLGLIDHIAYEDQLPKLLTGEDSKNEVKLIKKYAKKR 277 >gi|116073506|ref|ZP_01470768.1| Periplasmic serine protease (ClpP class) [Synechococcus sp. RS9916] gi|116068811|gb|EAU74563.1| Periplasmic serine protease (ClpP class) [Synechococcus sp. RS9916] Length = 269 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 5/256 (1%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 IAI G I + +++ + + + AL++ + SPGG+ + I A+ +++ + Sbjct: 16 IAIEGAIASGTRKRVLKALREVEQ-REFPALLLRIDSPGGTVGDSQEIHAALLRLREKGC 74 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G I A+ IV+ + GSIGV+ + + L+++G+ ++VKS Sbjct: 75 HVVASFGNISASGGVYIGVAAEKIVSNPGCITGSIGVILRGNNLSKLLERVGIRFETVKS 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++ +++Q ++DSSY FV V+E R + D +DGR+++GA+ Sbjct: 135 GAYKDILSPDRALSADERELLQALIDSSYAQFVDAVAEGRGLSPDTVRKFADGRVFSGAQ 194 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 K++GL+D +G +E L K PK L S+ + L + + Sbjct: 195 GKELGLVDELGDEERARALAAELADLDEDCKPITLGKPKKKLLASLPGSSVVARLAEMLE 254 Query: 278 LMKQTKVQGLWAVWNP 293 Q LW ++ P Sbjct: 255 TELSHSGQALW-LYRP 269 >gi|148359293|ref|YP_001250500.1| signal peptide peptidase [Legionella pneumophila str. Corby] gi|296107340|ref|YP_003619040.1| signal peptide peptidase [Legionella pneumophila 2300/99 Alcoy] gi|148281066|gb|ABQ55154.1| signal peptide peptidase [Legionella pneumophila str. Corby] gi|295649241|gb|ADG25088.1| signal peptide peptidase [Legionella pneumophila 2300/99 Alcoy] gi|307610447|emb|CBX00018.1| hypothetical protein LPW_17741 [Legionella pneumophila 130b] Length = 318 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 23/293 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ + +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRAIILVVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + IE+ + ALIV ++SPGGS E I+ +Q K+ KP +M ASA Sbjct: 90 TKGIEKAYKSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ ++ I A+ S+VGSIGVL+ L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDALQKLGISRRLQTSGVNKAFLDPFSPT 209 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 210 TEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALANGLIDGYASS 269 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 ++ + + I I D+ +N + KNL + + D +P++ K Sbjct: 270 GQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVILGMK 314 >gi|242280848|ref|YP_002992977.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] gi|242123742|gb|ACS81438.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] Length = 293 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 135/259 (52%), Gaps = 1/259 (0%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 +++++ L + V+ ++ + + ++G I +S ++ + + RDDS Sbjct: 16 FGFSLLLMAVALLWGAAAFFHGKVDLFSAGKIGVVNVQGTITNSLPTVKFLRDLRRDDSV 75 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ ++SPGG+ + ++ A++++ KP++ +AAS GY + + I+A+ Sbjct: 76 KGVLLRVNSPGGTIAPSQELYHAVKRLAEVKPIVASFGTVAASGGYYAAAPATKIMASSG 135 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV +Y ++K+GV + S MKA SPF+E+ P+ + + ++ + Sbjct: 136 SITGSIGVKAEYANFHQLMEKIGVKPVIITSGKMKAAGSPFTELTPEQREYLTALIMDMH 195 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + FV V+ +R + ++ ++DGR TG EAK++GL+D +GG E+ L AL + Sbjct: 196 NQFVDDVASARKLDREQVEKIADGRAITGREAKELGLVDRIGGFEDSVTVLKALCNIEGD 255 Query: 247 RKIKDWNPPKNYWFCDLKN 265 K+ + + ++ Sbjct: 256 VKVIEGPEEEKPLLKEILG 274 >gi|15646044|ref|NP_208226.1| protease IV (PspA) [Helicobacter pylori 26695] gi|2314611|gb|AAD08477.1| protease IV (PspA) [Helicobacter pylori 26695] Length = 292 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|54294636|ref|YP_127051.1| hypothetical protein lpl1713 [Legionella pneumophila str. Lens] gi|53754468|emb|CAH15952.1| hypothetical protein lpl1713 [Legionella pneumophila str. Lens] Length = 318 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ + +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRAIILVVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + IE+ R ALIV ++SPGGS E I+ +Q K+ KP +M ASA Sbjct: 90 TKGIEKAYRSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ ++ I A+ S+VGSIGVL+ L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDALQKLGISRRLQTSGVNKAFLDPFSPT 209 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 210 TEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALANGLIDGYASS 269 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 ++ + + I I D+ +N + KNL + + D +P++ K Sbjct: 270 GQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVILGMK 314 >gi|328957466|ref|YP_004374852.1| putative signal peptide peptidase SppA [Carnobacterium sp. 17-4] gi|328673790|gb|AEB29836.1| putative signal peptide peptidase SppA [Carnobacterium sp. 17-4] Length = 345 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 121/241 (50%), Gaps = 16/241 (6%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSP 76 D S + +++ G I D Q ++++E++ DD+ A+++S+++P Sbjct: 58 EAGDTSKRIVLLSVDGTILDGQTSGFTGDSVYDHDLFLQQLEQVLVDDTIKAIVLSVNTP 117 Query: 77 GGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG Y I + +++ KP+ + MAAS GY IS ++ I A+E +L GSIGV Sbjct: 118 GGGTYESAQIKDKLVEIQETTEKPIYVSMGSMAASGGYYISASAEKIFASEETLTGSIGV 177 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +K+GV ++KS K S + + +++Q +V++SY FV ++ Sbjct: 178 IMSGTNFSELFEKIGVDDTTIKSGEFKDIGSSTRTMTEEDAEILQTMVNTSYDRFVDVIV 237 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + ++DGRI+ GA+A GL+D +G QE+ +++ D +I + Sbjct: 238 EGRGMDEAVVRTIADGRIYDGAQAVSNGLVDEIGYQEDALEAIKK-DYDLEDAEIFTYQG 296 Query: 255 P 255 P Sbjct: 297 P 297 >gi|188533707|ref|YP_001907504.1| protease 4 [Erwinia tasmaniensis Et1/99] gi|188028749|emb|CAO96611.1| Protease IV [Erwinia tasmaniensis Et1/99] Length = 618 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 22/281 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSL 73 +Y +VA I G I D +E I D A++ + Sbjct: 313 IYDYRMKDANTVDGNVAVILASGAIMDGEEAPGSVGADTTALEIRSARLDPKIKAIVFRV 372 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGGS A E I + K+ KPV+ + MAAS GY +S +N ++A+ +L GSI Sbjct: 373 NSPGGSVTASETIREELAAAKDAGKPVVVSMGGMAASGGYWVSTPANYVIASPATLTGSI 432 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ V+ LD +GV V +SP+ S + + QMMQ +D Y F+ L Sbjct: 433 GIFGVINTVENSLDAIGVHTDGVATSPLADVAS-TKALPSEVQQMMQLSIDKGYQNFIGL 491 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V++SRN + ++ G +WTG +AK GL+D +G ++ L Sbjct: 492 VAKSRNKTPVEIDRIAQGHVWTGNDAKANGLVDALGDFDDAVAKAAELAK---------L 542 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + P+ W+ D +L +L + + + + + P Sbjct: 543 SKPQLSWYQDDPSLL--DMLFNQMQVSVHAALPATLKAYFP 581 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 110/293 (37%), Gaps = 45/293 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSW--SSHVEDNSPHVARIAIRGQIEDS-------- 50 + FV + I +++L +V ++F + +S D + + G + D Sbjct: 19 LNFVRECILNLFLVLLIVVAAGIWFQFHSASTAADTQKGALIVDLSGVVVDKPTVSNKMS 78 Query: 51 -------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++++ I + DD+ T +++ L + GG+ + I + + Sbjct: 79 RISRQLLGAGNDPLKENSLFDIVDAIRQAKGDDNITGMVLDLRNFGGADQPSLQYIGKTL 138 Query: 91 QKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++ ++ KP+ + A Y ++ +N I + V G Y K +DKL Sbjct: 139 REFRDSGKPIFATGESY-SQAQYYLASFANKIYLSPQGNVDLHGFATNSLYYKTLIDKLK 197 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +S + K+ PF +++P A V + ++ ++ +R I ++ Sbjct: 198 ISSHVFRVGTYKSAVEPFLRDDMSPAARDADGRWVGELWENYLNTLAANRQITPNQVFPG 257 Query: 208 SDGRIW---------TGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIK 250 + G + T AK L+D + V + L G D+ + + Sbjct: 258 AQG-VLDSLKKLGGDTAQYAKDNKLVDQLASSSLVERDLVKTFGWDKEAKNYR 309 >gi|300112959|ref|YP_003759534.1| peptidase S49 [Nitrosococcus watsonii C-113] gi|299538896|gb|ADJ27213.1| peptidase S49 [Nitrosococcus watsonii C-113] Length = 325 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 16/250 (6%) Query: 34 NSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +PH A + I G I +++ + + ++ ++ LI+ ++SPGGS I Sbjct: 73 TAPHTALVNIEGIIGADSFANAENIKKGLKAAFENEHIAGLILHINSPGGSPVQASQIND 132 Query: 89 AIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ + P + + ++ AS GY I+ A++ I A + S+VGSIG L + Sbjct: 133 QVHQLRKKHPDIPIHAVITDICASGGYYIAVAADQIYADKASIVGSIGALINSFGFVEAM 192 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +KLG+ + + K PFS + Q +Q ++D+ F+++V ++R Sbjct: 193 EKLGIERRLFTAGDYKGFLDPFSPMKEFEAQHIQKMLDNIQKQFIQVVKDNRGDRLKNDS 252 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDL 263 L G +WTG +A +GLID +G V + + KI D+ P F Sbjct: 253 SLFTGLVWTGEQAIDLGLIDGLGNSSYVAREIIG------AEKIIDYTPKPKLLDRFSRQ 306 Query: 264 KNLSISSLLE 273 + +++L Sbjct: 307 LGATFANMLS 316 >gi|317014847|gb|ADU82283.1| putative protease IV [Helicobacter pylori Gambia94/24] Length = 292 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 134/277 (48%), Gaps = 7/277 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSSANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ +A + LID + ++ L L Sbjct: 193 LVNEQYQMFVDDVAKARKLNAKDYKDFAEGKVFSAQKALNLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 ++K F + S++S++ + Sbjct: 253 ---SKVKKAYWLEKSPMERFIEKATQSVTSIITQALG 286 >gi|54297662|ref|YP_124031.1| hypothetical protein lpp1713 [Legionella pneumophila str. Paris] gi|53751447|emb|CAH12865.1| hypothetical protein lpp1713 [Legionella pneumophila str. Paris] Length = 318 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ + +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRTIILVVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + IE+ R ALIV ++SPGGS E I+ +Q K+ KP +M ASA Sbjct: 90 TKGIEKAYRSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ ++ I A+ S+VGSIGVL+ L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDALQKLGISRRLQTSGVNKAFLDPFSPT 209 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 210 TEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALANGLIDGYASS 269 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 ++ + + I I D+ +N + KNL + + D +P++ K Sbjct: 270 GQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVILGMK 314 >gi|254527035|ref|ZP_05139087.1| signal peptide peptidase SppA, 36K type [Prochlorococcus marinus str. MIT 9202] gi|221538459|gb|EEE40912.1| signal peptide peptidase SppA, 36K type [Prochlorococcus marinus str. MIT 9202] Length = 269 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 74/222 (33%), Positives = 124/222 (55%), Gaps = 7/222 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +++ +++I D ALIV + SPGG+ + I+ AI Sbjct: 8 KSKKRMARIVIDEPITSSTRVSVLKALKQI-EDREFPALIVRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G Sbjct: 67 KRLKDKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + ++Q ++D SY F V+E RN+P + +D Sbjct: 127 IKFETVKSGVFKDILSPDKPLSEEGRDLLQGLIDESYKQFTEAVAEGRNLPVEDVRKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA--LGVDQSIRKI 249 GRI+TG +AK +GL+D +G E V + L A + +D I+ + Sbjct: 187 GRIFTGTQAKDLGLVDEIGD-EFVARELAAKIVNIDPKIQPL 227 >gi|222823269|ref|YP_002574842.1| protease IV [Campylobacter lari RM2100] gi|222538490|gb|ACM63591.1| protease IV [Campylobacter lari RM2100] Length = 297 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 129/243 (53%), Gaps = 1/243 (0%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 ++ I T + + + + S S + + ++ ++A+I ++G+I D+ L+E+I ++ Sbjct: 14 IISFINTYFKTFVFLFIVFLILSPSKDNTKLSNANLAQINLKGEINDASTLLEQIYKLKD 73 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D++ ++ + SPGG+ I AIQ +K +KPV+ AS YL + +N+I+ Sbjct: 74 DNAIKGVLFYIDSPGGAFAPSMEIALAIQDLKAKKPVVAYAGGTIASGSYLSAVGANMII 133 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A S VGSIGV+ Q K+G+S +++K+ K + + + + + +Q++ Sbjct: 134 ANPASFVGSIGVIMQGFNASELAQKIGISDQTIKAGTYKEAGTFMRKWSKEEKEFLQNLA 193 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + SY F V+++RN+ ++T +D +++ EA K+ LID VG E + + L Sbjct: 194 NQSYILFTNFVAKNRNLDLNQTKSWADAKVFLANEALKLKLIDKVGNYELAKKEVEKLAK 253 Query: 243 DQS 245 ++ Sbjct: 254 VKN 256 >gi|318040377|ref|ZP_07972333.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. CB0101] Length = 270 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 132/260 (50%), Gaps = 5/260 (1%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARIAI G I + +++ + + + AL++ + SPGG+ + I AI Sbjct: 8 KSRRKLARIAIEGAIASGTRERVLKALREVEQ-REFPALLLRIDSPGGTVGDSQEIHAAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q+++ + V+ ++AS G + A+ IVA S+ GSIGV+ + + L+++G Sbjct: 67 QRLRQKGCRVVASFGNISASGGVYVGVAAEKIVANAGSITGSIGVILRGNNLSRLLERIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V ++VKS K SP + Q++Q+++DSSY FV V+E R++ +D Sbjct: 127 VQFETVKSGLYKDILSPDRALTAGERQLLQELIDSSYGQFVTAVAEGRDLEEGTVRSFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GR+++GA+A +GL+D +G +E + L +D + ++ PK + ++ Sbjct: 187 GRVFSGAQALVLGLVDQLGDEESARRLACELAELDVEKTRPINFGQPKKGLAGMIPGRNL 246 Query: 269 SSLLEDTIPLMKQTKVQGLW 288 + L + + L Q LW Sbjct: 247 FARLSEALHLELAWSGQPLW 266 >gi|255532961|ref|YP_003093333.1| signal peptide peptidase SppA, 67K type [Pedobacter heparinus DSM 2366] gi|255345945|gb|ACU05271.1| signal peptide peptidase SppA, 67K type [Pedobacter heparinus DSM 2366] Length = 590 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 11/247 (4%) Query: 29 SHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGS 79 S VA I G I S+ + + I + D A+++ ++SPGGS Sbjct: 301 DQPTSASQKVAIIYANGDIMGGDGSDHQIGSERISKAIRKARLDTDIKAVVLRVNSPGGS 360 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A + I+R I K KPVI ++AAS GY I+CA++ I ++ GSIGV P Sbjct: 361 ALASDVIWREIVLTKKIKPVIASFGDVAASGGYYIACAADSIFVQPNTITGSIGVFGIIP 420 Query: 140 YVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + DKLG++ VK+ S + ++Q+ V+ Y F+ V++ R Sbjct: 421 NFQKLFNDKLGITFDGVKTGKYADIMSVDRPMTAGERLIVQNDVNRVYDSFITRVADGRK 480 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + GR+W G +A ++GL D G + + + I ++ ++ Sbjct: 481 RTKAYIDSIGGGRVWVGTDAVRIGLADRTGNFNDAIIAAAKKAKIKDYS-IVEYPEMRDP 539 Query: 259 WFCDLKN 265 + + N Sbjct: 540 FKSLMDN 546 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 104/272 (38%), Gaps = 26/272 (9%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSH-VEDNSPHVARIAIRGQIEDS---------------- 50 + V L+ + +V S V NS V + + I + Sbjct: 19 LALFLVFFVLLIIGIVKTSLKEQKVSVNSNSVLLLNLDQSITERTADDPLSRLPLVGSDE 78 Query: 51 ------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 ++I +++ DD+ + ++++SP I A+ K K I Sbjct: 79 DKSIGFNDVIRALQKAKTDDNIKCVYINVTSPQAGFATMREIRDALIDFKTSKKKIIAYS 138 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E+ Y ++ A++ I + G+ + + K LDKLG+ + V+ K+ Sbjct: 139 EVYTQGAYYLASAADKIYLNPEGALEFKGLKSETMFFKGALDKLGIEAQIVRVGNYKSAV 198 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKV 221 PF +++ K + + + Y F+ +++SRNI + ++D +I +A Sbjct: 199 EPFFAEKMSDKNREQVTAYLHGLYDTFLEGIAKSRNISTETLYQIADDYKIRQPQDAVAY 258 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++D + ++++ L L + + + Sbjct: 259 KMVDELKYKDQIIDELKTLSGKEKKNDLTTIS 290 >gi|294054568|ref|YP_003548226.1| signal peptide peptidase SppA, 67K type [Coraliomargarita akajimensis DSM 45221] gi|293613901|gb|ADE54056.1| signal peptide peptidase SppA, 67K type [Coraliomargarita akajimensis DSM 45221] Length = 603 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 10/235 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 + +A + G+I D + L + + R+ D A+++ ++SPGGSA A Sbjct: 313 KSGERIAVVYAEGEIIDGGKQYGSVAGDWLAQELRRLRNDSEVKAVVLRVNSPGGSAVAS 372 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R +++ KP+I + AAS GY IS ++ IVA ++ GSIGV ++ Sbjct: 373 EIIQRETRRLAAEKPLIVSMGSYAASGGYWISAYADSIVAQPYTITGSIGVFGLVFNIQE 432 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 KL + VK++P S + + ++Q D Y FV V++ R + K Sbjct: 433 AAAKLAIQFDGVKTAPFADIHSLSRPRTEEEMALIQQFTDEIYTAFVDRVADGRALETSK 492 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L++GR+W+G A+++ L+D +GG ++ + L + I+ P ++ Sbjct: 493 VRELAEGRVWSGLRAQQLALVDHIGGLKQAIANAQDLAQLDT-ESIEQIPSPSSF 546 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 121/317 (38%), Gaps = 45/317 (14%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSH--VEDNSPHVARIAIRGQIEDSQ-------------- 51 I + +++L L ++ S S VE V + + I+D+ Sbjct: 17 IFGVWGIIALFVLMGIFASLSEKPAVEVQDGSVLVLNLNTTIQDAPPSSSFEQAVQESLG 76 Query: 52 ----------ELIERIERISRDDSATALIVSLS---SPGGSAYA-GEAIFRAIQKVKNR- 96 ++I IE + DDS AL++ + GS A I ++++ + Sbjct: 77 GRPQSATYLLKVINTIEHAAGDDSIAALLLHGNLQQEGYGSGLALVSEIRQSLEAFQASG 136 Query: 97 KPVITEVHEMAASAG-YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 K V + + S Y ++ +N I L+ G+ P++ L+K G+ +++ Sbjct: 137 KQVHAYL--VNPSQKDYYLASIANEIWINPFGLISLQGLASNAPFLGDTLEKYGIGVQTT 194 Query: 156 KSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRI 212 + K+ F+ ++ + ++ + + S +R + ++ L + Sbjct: 195 RVGTYKSAVELFTRNRMSEADREQKTALLSDLWTSLLVETSRARELSVEQLETLSAQQAF 254 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 +T +A+ LID VG +E+ L + + ++ D ++ + + L Sbjct: 255 FTAEKAQSAHLIDRVGYLDELIDDLA--------TRYQASAKKHSFRQIDFEDYANAMAL 306 Query: 273 EDTIPLMKQTKVQGLWA 289 E + + ++ ++A Sbjct: 307 ESKLTIKSGERIAVVYA 323 >gi|308183529|ref|YP_003927656.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori PeCan4] gi|308065714|gb|ADO07606.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori PeCan4] Length = 292 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVDDVAKARKLNAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|284117617|ref|ZP_06386744.1| protease IV [Candidatus Poribacteria sp. WGA-A3] gi|283829490|gb|EFC33855.1| protease IV [Candidatus Poribacteria sp. WGA-A3] Length = 785 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 17/247 (6%) Query: 35 SPHVARIAIRG---------------QIEDSQELIERIERISRDDSATALIVSLSSPGGS 79 P VA I G Q+ + + ++ + DDS A+++ + S GG Sbjct: 459 QPKVAIIKAEGLMLTGDSFVDPFMGTQVMGADTITRIVKEVKDDDSVKAVVLRIDSGGGL 518 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I+R + ++K KP++ + ++AAS GY I+ ++ IVA ++ GSIGV+ Sbjct: 519 VVAADTIWRELVRLKEVKPLVVSMGDVAASGGYYIAAPADTIVAEPGTITGSIGVIGGKY 578 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN- 198 K +KLG+ + +K + + + ++Q + Y F V+ R Sbjct: 579 SFKGLYEKLGIHKEILKRGQHADFYTDYGDYPLAEKAIVQKQIKEIYDDFTEKVALGRTE 638 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + L GR+W+G +AK+ GL+D +GG + ++ PK Sbjct: 639 LTVEDVDRLGRGRVWSGRQAKENGLVDELGGLSLAIAIAREHAKLGE-KSVEIIEFPKKT 697 Query: 259 WFCDLKN 265 W +L + Sbjct: 698 WMSELLS 704 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 76/188 (40%), Gaps = 2/188 (1%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 DD ++V + G + + AI + V+ ++ Y+++ A + Sbjct: 250 AKWDDDVAGILVRIDGSGYGIAQLQEMSDAILDFRESGRVVFCYLSNCSTGDYMVASACD 309 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQM 177 I+ ++ V IG+ ++ + K LD LG+ K+ F +++ ++ Sbjct: 310 GILIQPSAEVRLIGIRTEHSFYKGALDLLGIRANLEHLGEYKSASDAFTRRDMSKAHREI 369 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++D Y VR ++E R + D +T +A V L+D + ++E+ + Sbjct: 370 QNIILDDLYDQLVRAIAEGRGWTRESVRKRIDEGPYTARQAFAVELVDRLVYEDELLDVV 429 Query: 238 YALGVDQS 245 L ++ Sbjct: 430 TELTDTRT 437 >gi|262274575|ref|ZP_06052386.1| protease IV [Grimontia hollisae CIP 101886] gi|262221138|gb|EEY72452.1| protease IV [Grimontia hollisae CIP 101886] Length = 618 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 11/237 (4%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALI 70 +++ ++ + +A + G I D + +D+ A++ Sbjct: 309 VSIYDYAPLDFDYPKANQIAVVVASGAIIDGFETEGTIGGDTTAALLRDARLNDAIKAVV 368 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + + SPGGSA+A E I + +K KPV+ + +AAS GY IS ++N I+A T++ Sbjct: 369 LRVDSPGGSAFASEVIRNEVDALKKAGKPVVVSMSSVAASGGYWISSSANRILAQPTTIT 428 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ + L K GV + ++P + + +MQ +++ Y F Sbjct: 429 GSIGIFGILTTFEDVLAKYGVYNDGIGTTPFAGVG-VTRALPDEISDIMQLGIENGYQRF 487 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + LV+ RN+ + ++ GR+WTG +A K GL+D +G ++ L + Sbjct: 488 IGLVASERNLSLEDVDQVAQGRVWTGYDAMKRGLVDQMGDFDDAIAVAAELAKVEEY 544 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 103/280 (36%), Gaps = 64/280 (22%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVA------RIAIRGQIEDSQ---------------- 51 +L + L +YF +++ E + + + I G I + + Sbjct: 29 ILFIAILVGIYFVFTTEHETQTKPIEQPEQALLVDIAGPIVEKRRRIDPYDFATRNLFGQ 88 Query: 52 ---------ELIERIERISRDDSATALIVSL----SSPGGSAYAGEAIFRAIQKVKNR-K 97 +++++I ++DD +++SL + S I +AI + K K Sbjct: 89 QMHVENVLYDIVDQIRAGAKDDKINGMVLSLSDMSET---SLTKLRYIAKAINEFKATGK 145 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLV-----GSIGVLFQYPYVKPFLDKLGVSI 152 PV+ S Y ++ ++ I A V GS Y K L+ L V+ Sbjct: 146 PVVAIGDHYNQS-QYYLASYADEIFMAPDGAVLLRGYGS-----YNLYFKELLENLDVTT 199 Query: 153 KSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----KTLV 206 + K+ P++ +++ +A + ++ + FV V+ +RNI Sbjct: 200 HVFRVGTYKSFVEPYTRTDMSEEAREANSVWLNQLWAAFVDDVATNRNIDPAVLTPDAPS 259 Query: 207 L------SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L + G A+ +GL+D + +++ L + Sbjct: 260 LIAKLKEAGGDF--AKLAQNMGLVDELLTRQQTRLRLADM 297 >gi|212635276|ref|YP_002311801.1| peptidase S49, SppA 67 kDa type:peptidase S49, SppA [Shewanella piezotolerans WP3] gi|212556760|gb|ACJ29214.1| Peptidase S49, SppA 67 kDa type:Peptidase S49, SppA [Shewanella piezotolerans WP3] Length = 613 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 13/241 (5%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 V I +G+I + + E + + DDS A+++ + SPGGSA+A E Sbjct: 324 DNKVGIIVAKGKILNGSQPAGEIGGESTSELLRKARFDDSIKAVVLRVDSPGGSAFASEQ 383 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +K KP++ + AAS GY IS +++ I A T+L GSIG+ + Sbjct: 384 IRQEVLALKAANKPIVVSMGSYAASGGYWISASADYIYATPTTLTGSIGIFGMVTTFEDS 443 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L +GV V +S S ++P+ ++Q ++ Y F+ LV+ R++ ++ Sbjct: 444 LASIGVHTDGVATSDWAGF-SVTKGISPQISAVIQRHIERGYKDFISLVATERDMTLEQV 502 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYWFCD 262 ++ GR+WTG +A ++GL+D +G + L I+ P++ + + Sbjct: 503 DNIAQGRVWTGRKALELGLVDGIGDLQNAVTHAAELAKIDHFDTEVIQQELSPQDQFIQE 562 Query: 263 L 263 + Sbjct: 563 M 563 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 53/310 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K+ + L+ +V S ++ + + G I D + ++ +E + Sbjct: 22 TRKLFLNLIFFGLIIALIVTLSSEETLKVEDGSALVLNLSGTIVDQKRRVDPLEAAMKSG 81 Query: 65 SAT----ALIVS--LS-----SP---------------GGSAYAGEAIFRAIQKVKNR-K 97 SA +++S + S G ++I A+ K K Sbjct: 82 SAKDGSGEILLSDVIDVVNNASSDARISQLVLDLGHLRGTGMSKLQSIGDALNNFKETGK 141 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKS 154 P++ + + Y ++ ++ I GS+ + Y K LDKL + Sbjct: 142 PIVAHANWFGQN-QYFLASFADRIYLNPQ---GSVEIEGLGRYRQYFKSALDKLKIKAHV 197 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-------- 204 + K+ PF +++ A + +++ + + V ++R+I + Sbjct: 198 FRVGTFKSAVEPFIRDDMSDAAKEANLALLNDLWESYSTTVGQNRDIAASQLSLSAKEYL 257 Query: 205 --LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 L +DG+ + A + +D + EE + L + ++ K D K F D Sbjct: 258 AELDKADGQ--SSQMALNLKWVDELKTAEE-----FRLSMVDAVGKSADGESFKQVDFYD 310 Query: 263 LKNLSISSLL 272 +++ S L Sbjct: 311 YLSVTASHPL 320 >gi|126696719|ref|YP_001091605.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9301] gi|126543762|gb|ABO18004.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. MIT 9301] Length = 269 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 127/222 (57%), Gaps = 7/222 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +++ +++I D ALIV + SPGG+ + I+ AI Sbjct: 8 KSKKRMARIVIDEPITSSTRVSVLKALKQI-EDREFPALIVRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++KN+ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G Sbjct: 67 KRLKNKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKVG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + +++Q ++D SY F V++ RN+P ++ +D Sbjct: 127 IKFETVKSGVFKDILSPDKPLSEEGRRLLQGLIDESYKQFTEAVADGRNLPVEEVRKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA--LGVDQSIRKI 249 GRI+TG +AK++GL+D VG E V + L A + +D I+ + Sbjct: 187 GRIFTGTQAKELGLVDEVGD-EFVARELAAEMVNIDPKIQPL 227 >gi|254995186|ref|ZP_05277376.1| protease IV (sppA) [Anaplasma marginale str. Mississippi] gi|255003361|ref|ZP_05278325.1| protease IV (sppA) [Anaplasma marginale str. Puerto Rico] gi|255004484|ref|ZP_05279285.1| protease IV (sppA) [Anaplasma marginale str. Virginia] Length = 291 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 133/210 (63%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + +VAR+ I G+I S+ + R++ DS AL++ + SPGG+ EA+++ Sbjct: 43 GTLRRTHDYVARVRISGEIGRSRAREAMLARLAESDSVKALVLRIDSPGGTVGDSEALYQ 102 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I+++ +KPV+ + +AAS GY+ + A++ +VA ++ GSIGV+ QY V KL Sbjct: 103 QIREIALKKPVVAVLGNVAASGGYMAAIAADHVVARHGTITGSIGVVSQYIGVAEAAGKL 162 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+++KS+K++P+K+ SP E++P+ ++Q VVD + +FV LV+E R DK +S Sbjct: 163 GIALKSIKTAPLKSNMSPLEELSPEGESIIQGVVDDFHVFFVGLVAERRGFTPDKVSAVS 222 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 DGRI+TGA+A + GLID +GG++E + L Sbjct: 223 DGRIYTGAQALQAGLIDAIGGEKEALEWLK 252 >gi|94677025|ref|YP_588883.1| protease 4 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220175|gb|ABF14334.1| signal peptide peptidase SppA, 67K type [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 618 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 21/249 (8%) Query: 34 NSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +S +A I + G I + QE + +I D + ALI+ ++SPGGS A E Sbjct: 332 HSAQIAVIFVDGTITNEQERPGLVNCDKIAFQIRNACLDPNVKALILRVNSPGGSVNASE 391 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I ++ +N KP++ + MAAS GY IS NII+A+ +++ GSIG+ ++ Sbjct: 392 IIRAELETTRNANKPIVISMGGMAASGGYWISTPGNIIIASPSTITGSIGIFGIVHTIEN 451 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD +G+ V +SP+ S ++ + MMQ V++ Y+ FV LV++SRN + Sbjct: 452 LLDYVGIHADGVATSPIAGT-SITKKLPAELSTMMQLNVENGYNNFVSLVAQSRNKTISE 510 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G IW G++A K GL+D +G ++ L +K + K W+ D Sbjct: 511 IEKIAQGHIWIGSDALKKGLVDKLGDFDDAVSQAAKLA------NLKQY---KLNWYIDD 561 Query: 264 KNLSISSLL 272 NL IS+LL Sbjct: 562 VNL-ISALL 569 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 95/269 (35%), Gaps = 45/269 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-AIRGQIEDSQ-------- 51 + F + I +++L +V + + ++ A + ++G I D Sbjct: 23 LIFFRELIANLFILLLIVVIVNICLHITNTTPSFMKKGALVMDLKGFIVDQSIEKKKLRL 82 Query: 52 -------------------ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQ 91 +++ + + ++ T L++ L + G+ + I +A+ Sbjct: 83 FNRNLHNGSNYTIPENSLFDIVNILRQAKNNNHITGLVLLLKNFYGADQPSLQYIGKALH 142 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + +N KP+ V + + A Y ++ +N I V G Y K LDKL + Sbjct: 143 EFRNSGKPIYA-VGDNYSQAQYFLASYANKIYLLPQGEVDLHGFATNNLYYKSLLDKLRI 201 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVL 207 + + K+ PF ++ A + ++ +V+ +RN+ + L Sbjct: 202 NSHVFRVGTYKSAAEPFLRDNMSKAARDADSRWTKQLWQNYLNIVATNRNLTPQQLFPNL 261 Query: 208 SD---------GRIWTGAEAKKVGLIDVV 227 S G T A K +D V Sbjct: 262 STILKKFSAVKGD--TAQYALKNKWVDEV 288 >gi|196231671|ref|ZP_03130528.1| signal peptide peptidase SppA, 36K type [Chthoniobacter flavus Ellin428] gi|196224143|gb|EDY18656.1| signal peptide peptidase SppA, 36K type [Chthoniobacter flavus Ellin428] Length = 345 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 16/269 (5%) Query: 34 NSPHVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I +RG I S+ +L ++E+ + D+ A+++ + SPGG A Sbjct: 65 TDSKIALIYLRGVISSSEPGALGESMVDDLKIQLEQAATDEKVKAVVLYVDSPGGEVTAS 124 Query: 84 EAIFRAIQKVKN-----RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 ++I+ A++KV+ +KPV+ + +AAS GY ISCA ++A ET+L GSIGV+ Q Sbjct: 125 DSIYDAVRKVREGGYGKKKPVVVYMGSLAASGGYYISCAGTWLMANETTLTGSIGVIMQS 184 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 K KLG+ + KS K S ++ + +Q +V +Y FV +V++ R Sbjct: 185 LNYKELFGKLGLQTVTFKSGQFKDMLSGSRDLTQEERDYIQKMVMDTYGKFVGIVAKERK 244 Query: 199 IPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + D+ L+DGR+ +G +A LI+ G E+ + LG + I+ +P K Sbjct: 245 LNEDELRHGLADGRVISGKDALAAKLINATGEVEDAYAKAMELGNARGATVIRYESPFKL 304 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 L S + +E + + K++ Sbjct: 305 GKLFRLLGQSEKTSVEVNLANTIRPKLEA 333 >gi|21674462|ref|NP_662527.1| protease IV [Chlorobium tepidum TLS] gi|21647650|gb|AAM72869.1| protease IV [Chlorobium tepidum TLS] Length = 597 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 14/273 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVS 72 + + +A I I G I D + E ++ D A+++ Sbjct: 288 TGGMRPQGGGDRIAVINITGMIVSDGAGGMSEGDGTDVATVKEALQTAIDDLKVKAIVLR 347 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG A A + + + K +KP++ + +AAS GY+++ A + I A ++ GSI Sbjct: 348 IDSPGGDALAASTMLELLNEAKAKKPIVASMSGLAASGGYMVALAGDKIFAEPLTITGSI 407 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV P + L+K G+ + + +PF + + + ++ + Y F+ Sbjct: 408 GVFSLKPDLSSLLEKTGIRREVLIRGRFADAETPFRAFDDASFRKFVELTGTVYEDFIAK 467 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKD 251 V++ R++ + ++ GR+W+G A +VGLID +GG + Q L GV + ++ Sbjct: 468 VAKGRHMTPAQVDAVAGGRVWSGKRALEVGLIDQIGGLGDAVQEAKKLAGVKKEVKPALL 527 Query: 252 WNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + P + W L S ++ M + + Sbjct: 528 YLPAQKTWLEYLLGSDTSDMVSALTAAMVRESL 560 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 85/193 (44%), Gaps = 11/193 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEV---HEM 106 +EL+ ++R D ++++ + G S + + +I ++ K V + + Sbjct: 77 EELLTILDRAKTDRRVDSVLLRIDGLGASPAKIQELRSSIAALRKSGKKVTAFLVTPEDK 136 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y ++ A + I+ + S + G+ + +V L KLGVS ++ + K+ Sbjct: 137 D----YQLAVACDSIIVQKGSWMTLDGLKAELFFVADPLKKLGVSFQAAQWKKYKSAVET 192 Query: 167 FSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGL 223 F+ +P+ ++ ++D ++ ++ VS R I D + D + T +A + L Sbjct: 193 FTRNSASPENLEETNALLDDAWSDYLDSVSRQRRIGKDAFRKVVDSLAVLTPEKALGLHL 252 Query: 224 IDVVGGQEEVWQS 236 ID V + E+ Q Sbjct: 253 IDRVATERELEQE 265 >gi|119472416|ref|ZP_01614534.1| protease IV, a signal peptide peptidase [Alteromonadales bacterium TW-7] gi|119444938|gb|EAW26236.1| protease IV, a signal peptide peptidase [Alteromonadales bacterium TW-7] Length = 621 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 21/282 (7%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELI 54 K + R LSLV VV+ + VA + RG I D + Sbjct: 298 TFKHVSFRQ-YLSLVKPPVVF------DNPITEKVAVVVARGTIVDGERRAGEIGGDSTA 350 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 + + DD A+++ + S GGS +A E I + +K KPVI + +AAS GY Sbjct: 351 ALLRKARLDDKVKAVVLRIDSGGGSMFASEVIRAEVLALKAAGKPVIASMSSVAASGGYW 410 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A+N I AA +++ GSIGV + + L K+GV V ++ M S +N K Sbjct: 411 IASAANEIWAAPSTITGSIGVFGTFMTFENTLSKIGVYSDGVATTEMAGF-SVTRPLNEK 469 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q++Q V+ +Y F+ +V+++R + ++ ++ GR+W ++A ++GLID +G +++ Sbjct: 470 MAQVIQMSVEEAYGRFLNVVAQARGMTPEEVDAIAQGRVWIASQALELGLIDKLGDKQDA 529 Query: 234 WQSLYALGVDQSIRK---IKDWNPPKNYWFCDLKNLSISSLL 272 + AL ++ +D +P + + S+ S+L Sbjct: 530 IDAAAALAKLENYDVKTITQDLSPQEKMLQDIFGSASLKSML 571 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 94/298 (31%), Gaps = 41/298 (13%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F + I +L ++ S + V R+ + G + + Sbjct: 13 INFSRRLIINFLFVLLVIVFIAGISSDDDKIIVEKGSVLRLNLNGPLVEEKLYVDPIEAA 72 Query: 51 ----------------QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKV 93 +++E I ++D + L++ L P + I AI+ Sbjct: 73 LNDATSGNDEPSEILLDDVVEVINEAAKDSRISVLLLDLQEMPKAHLNKLKQITNAIEGF 132 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K + A Y I+ ++ I V G Y K L+KL V+ Sbjct: 133 KQAGKKVIATGYYYTQAQYYIAAHADEIAMHPYGSVAIEGYGMYPLYFKDALEKLEVTQH 192 Query: 154 SVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + K+ PF ++++ A + + + + ++ + + VS R D Sbjct: 193 IFRVGTFKSAVEPFIRNDMSDAAKEANRVWLGALWNEYKQDVSAVRPFDESNFDETMD-- 250 Query: 212 IWT----------GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ G A +D + +++ Q L L Q K + Y Sbjct: 251 VYLEKMQAANGDAGKYALDNQWVDSLKTSQQIRQQLIDLVGAQEDGKTFKHVSFRQYL 308 >gi|109948135|ref|YP_665363.1| protease IV [Helicobacter acinonychis str. Sheeba] gi|109715356|emb|CAK00364.1| protease IV [Helicobacter acinonychis str. Sheeba] Length = 292 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 122/245 (49%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I ++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSTPPNLAKLYLNGAIFSTEYFNKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKIPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++RN+ ++G++++ +A + LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARNLNPKDYKNFAEGKVFSAQKALSLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|84393631|ref|ZP_00992383.1| protease IV [Vibrio splendidus 12B01] gi|84375772|gb|EAP92667.1| protease IV [Vibrio splendidus 12B01] Length = 616 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 11/205 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I G I D + + DD A+++ + SPGGSA+A E I Sbjct: 327 VAVIVASGAIMDGKQPRGTVGGDTTAALLRQARNDDKVKAVVLRVDSPGGSAFASEVIRN 386 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ +K KPV+ + +AAS GY IS ++ I+A T+L GSIG+ + L+ Sbjct: 387 EIEAIKQAGKPVVVSMSSLAASGGYWISMGADKILAQPTTLTGSIGIFSVITTFEKGLND 446 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV V +SP + ++ A Q +++ Y F+ LV E+R + D + Sbjct: 447 IGVYTDGVGTSPFSGLG-ITTGLSDGAKDAFQMGIENGYRRFISLVGENRGMEVDAVDKI 505 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEE 232 + GR+WTG +A + GL+D +G ++ Sbjct: 506 AQGRVWTGQDAIQKGLVDEIGDFDD 530 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 103/285 (36%), Gaps = 61/285 (21%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDSQ------ 51 FV + + +LS+ + VYF H + P V + + G I + Sbjct: 21 FVRLALVNLFFLLSIAIIYFVYF----HSDTTQPTVPQESALVLNLSGPIVEQSRYINPM 76 Query: 52 -------------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQ 91 +++E I DD+ T ++++L P + I +A+ Sbjct: 77 DSVTGSLLGKDLPKENVLFDIVETIRYAKDDDNVTGIVLALKELPETNLTKLRYIAKALN 136 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFL 145 + K KP+ S Y ++ + + + GVL + Y K L Sbjct: 137 EFKATGKPIYAVGDFYNQS-QYYLASYATKVFLSPDG-----GVLLKGYSAYSLYYKTLL 190 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 +KL V+ + K+ PF +++ A + + + +V VS +R I Sbjct: 191 EKLDVNTHVFRVGTYKSAIEPFIRDDMSDAAKESASRWLGQLWGAYVDDVSNNRQIDAKT 250 Query: 203 ---------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 K L DG I A+K+GL+D + +++V L Sbjct: 251 LNPSMDSFLKDLESVDGDI--AKLAEKLGLVDELATRQQVRLELA 293 >gi|33861736|ref|NP_893297.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640104|emb|CAE19639.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 269 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 123/222 (55%), Gaps = 7/222 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +++ +++I D ALI+ + SPGG+ + I+ AI Sbjct: 8 KSKKRMARIVIDEPITSSTRVSVLKALKQI-EDREFPALILRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K + V+ ++AS G I AS+ IVA ++ GSIGV+ + + L+K+G Sbjct: 67 KRLKEKGCKVVASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLNKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + +++Q +++ SY F VSE RN+ D +D Sbjct: 127 IKFETVKSGIYKDILSPDKPLSKEGRELLQGLINESYKQFTEAVSEGRNLLVDDVKKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA--LGVDQSIRKI 249 GRI+TG +AK +GL+D +G E V + L A + +D I+ + Sbjct: 187 GRIFTGTQAKDLGLVDKIGD-EFVARELAAEMVNIDPKIQPV 227 >gi|317179610|dbj|BAJ57398.1| protease IV [Helicobacter pylori F30] Length = 292 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 122/245 (49%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKDFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVDDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQNRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|116328102|ref|YP_797822.1| periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331445|ref|YP_801163.1| periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120846|gb|ABJ78889.1| Periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125134|gb|ABJ76405.1| Periplasmic serine protease (ClpP class) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 330 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 32/287 (11%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 N + I I G I D E + +++E D A+I+ ++SPG Sbjct: 46 GKNEDKILIIPIDGVISDEGEKTFFGGQEDSILAGVKKQLELAELDPEIKAVILKINSPG 105 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS A + +++ I + K +K PV++ + AAS Y IS A+++I+A TS+ GSIGV+ Sbjct: 106 GSVTASDILYKEILQFKAKKKIPVVSLFMDTAASGAYYISMATDLIIAHPTSVTGSIGVI 165 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 VK LDKLGV +S++S K SP +++P+ +++Q +VD + F +V Sbjct: 166 LSGINVKEGLDKLGVKDQSIRSGGNKTIGSPLEDLSPEQRKLLQSIVDDLFEKFFEVVKN 225 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + ++DGRI+T ++A GLID +G + Q AL + RK N Sbjct: 226 GRPGKNPAELRKIADGRIFTASQALGHGLIDKIGYFDNAVQETMAL---PNYRKTPGSNS 282 Query: 255 PK------------NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 P+ N++ L S + + + Q + +W+ Sbjct: 283 PRIIYYSQSTDKRANFYQVQSPELRQDSTISKILGIRSQVRFLYIWS 329 >gi|56552823|ref|YP_163662.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ZM4] gi|56544397|gb|AAV90551.1| signal peptide peptidase SppA, 67K type [Zymomonas mobilis subsp. mobilis ZM4] Length = 637 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 11/272 (4%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSA 66 S +++ F ++ + + + G+I D + + + Sbjct: 297 SFKAVSLASFIGANPPSSAGSAIGVVTVSGEIVDDETRSGQVSGSTISSLLLDTLAKGDI 356 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAE 125 AL+V + SPGGS A E + AI K + PVI + +AAS GY IS ++ I A Sbjct: 357 KALVVRVDSPGGSVSAAEQMRSAILAAKAKGLPVIVSMGSVAASGGYWISTPADKIFADP 416 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +++ GSIGV P + L K+G+S VK++P+ +P F P+ Q+MQ VD+ Sbjct: 417 STITGSIGVFSLIPTFQQTLHKIGLSADGVKTTPLSGQPDVFRGTTPEFDQLMQFGVDTV 476 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQ 244 Y F +V+ SR++P +K +++GR+W+G +AKK+GL+D G ++ +D Sbjct: 477 YDRFTSIVASSRHLPLEKVREIAEGRVWSGVDAKKIGLVDQYGFLQDAVTEAAKRAHLDP 536 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 S ++ + ++ LKNL + I Sbjct: 537 SHTHMQFIDEEPSFVEMILKNLFQHQASDAKI 568 Score = 87.9 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 20/204 (9%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAY--AGEAIFRAIQKVKNRKPVITEVHEM 106 +E++ +E+ +R+ A+++ LS S GG A A + ++ KPV++ Sbjct: 91 REVVYGLEQAARNPKIKAVVLDLSDFSGGGRAAISAVDNALDKVR--AAGKPVLSFAGFY 148 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A Y I+ I V +GV Y K LDKLGV K + K+ P Sbjct: 149 N-DARYRIAAHGTEIWLPNLGEVALLGVGGNQLYYKGLLDKLGVETKIYRVGRFKSFVEP 207 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--------DGRIWTGA 216 F +E +P A Q + +S + ++ ++ +R P + G + Sbjct: 208 FTRTEQSPDAKAANQALANSLWQTTLQDIAHAR--PKAHVAEWALNPTSFLKSGHSF-AE 264 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 A+ G+ID +G + + +L Sbjct: 265 LAQSAGMIDHIGNAIDFGNRVASL 288 >gi|224418348|ref|ZP_03656354.1| protease IV (PspA) [Helicobacter canadensis MIT 98-5491] gi|313141879|ref|ZP_07804072.1| protease IV [Helicobacter canadensis MIT 98-5491] gi|313130910|gb|EFR48527.1| protease IV [Helicobacter canadensis MIT 98-5491] Length = 291 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 125/245 (51%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F++K K L + + V+ F SS + +VARI ++G I S +E + ++ Sbjct: 11 LDFIMKYFKA----LVFLLIVVLIFMPSSSENSSLANVARIDLKGMIIQSDSFLEELSKL 66 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + + +++ + SPGG+ I A+++++++KP++ AS YL ++ Sbjct: 67 ENNPNIKGVLLVIDSPGGTIPPSVEISEAVKRMRSKKPIVAYAQGSMASGSYLAGVWADR 126 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A + +LVGSIGV+ V +KLG+ + +K+ K + N +M++ Sbjct: 127 IIANKGALVGSIGVILNGVDVSELAEKLGIKTQILKAGIYKEAGTFMRPWNQAEEEMLKG 186 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ Y FV V +RN+ K + GR+++ + A K+GL+D + E ++L+ L Sbjct: 187 LIKEQYEMFVSEVVAARNLEITKEGEFAQGRVFSASNALKLGLVDSISSIYEAQKTLFEL 246 Query: 241 GVDQS 245 Q+ Sbjct: 247 AKIQN 251 >gi|42525822|ref|NP_970920.1| signal peptide peptidase SppA [Treponema denticola ATCC 35405] gi|41815872|gb|AAS10801.1| signal peptide peptidase SppA [Treponema denticola ATCC 35405] Length = 609 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 16/267 (5%) Query: 15 LSLVTLTVVYFSWSSHVED--NSPHVARIAIRGQIED-----------SQELIERIERIS 61 S+ T+ Y S++++ + + + I I G I S ++++ + Sbjct: 300 FSVTVNTIGYDSYNANFAEMPSQNSIGVIHINGAISSTGTGRIDDSAVSYKIVDLFDIAQ 359 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNI 120 D + A++V ++S GG +A E I RAI + K PV+ + +AAS Y IS +++ Sbjct: 360 GDPTVKAIVVRVNSGGGEVFASEEIRRAIDRAKASGLPVVVSMGSVAASGAYWISSSADY 419 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ ++ GSIGVL P K + K LG++ V S K S E +P+ ++ Q Sbjct: 420 IFASPYTITGSIGVLATAPSFKEAVKKYLGITSDLVYSGQ-KPSYSVLEEPSPEEKEVRQ 478 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V Y F+ V+ RN+P L+ GR+++G +A + L+D +G +E + Sbjct: 479 MEVMHIYKTFIETVARGRNLPEKTVEELAGGRVYSGEQALNLKLVDALGSLDEAVKYAAE 538 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNL 266 L +K+ P + +K++ Sbjct: 539 LANISGQYSVKEIKKPLPFTEALIKSI 565 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 80/199 (40%), Gaps = 15/199 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG-SAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L++ I+ + D T+L + S GG S+ + A++ KN K + + S Sbjct: 96 DLVKAIKNAAFDRRITSLYLDFSELGGLSSGHLSELGDALKVFKNSGKKIYAYA--VGYS 153 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y ++ ++ I V G + + K +K G+ +++ K +S Sbjct: 154 IPSYFLASYADRIGIDPLGEVSFAGFASRPVFFKGLEEKFGIKWNVIQAGTYKGMAETYS 213 Query: 169 E--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRI--WTG---AEA 218 ++ ++ + D ++ + ++ +RN+P +K ++ I + G A Sbjct: 214 RDNLSQNVRTNLKSMFDDLWNKYTSDIAANRNMPPEKIRAFAENNNALIKKYEGNGAKAA 273 Query: 219 KKVGLIDVVGGQEEVWQSL 237 + G + + +E ++ Sbjct: 274 LEEGFVTDIASVDEFAANI 292 >gi|226326247|ref|ZP_03801765.1| hypothetical protein PROPEN_00089 [Proteus penneri ATCC 35198] gi|225205325|gb|EEG87679.1| hypothetical protein PROPEN_00089 [Proteus penneri ATCC 35198] Length = 404 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 14/269 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGG 78 SS ++ ++A + ++G I D + + +I + D + AL++ ++SPGG Sbjct: 107 SSLPANDEGNIAVVVVQGAIIDGESIPGSAGGTTIANQIRQARLDPNIKALVLRVNSPGG 166 Query: 79 SAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S A E I + K +K V+ + +AAS GY IS +N I+A+ ++L GSIG+ Sbjct: 167 SVSASEQIRSEVAAFKQQKKHVVVSMGGLAASGGYWISTPANKIIASPSTLTGSIGIFGV 226 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L+ +GV V +SP+ S +++ + +++Q ++S Y F+ LV+ESR Sbjct: 227 INTFENSLESIGVYTDGVTTSPLAG-LSVTNKLPEEFAELLQLNIESGYKTFIHLVAESR 285 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + ++ GR+W G +AK VGL+D G ++ + + + + DW P+ Sbjct: 286 KKTPAQIDRIAQGRVWVGIDAKNVGLVDEFGDFDDAIDAAAKMAKID--QPVVDWMKPEL 343 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + +S+SS + +P Q + Sbjct: 344 SLSEQII-MSLSSNAKALLPDPLQAYIPA 371 >gi|317010195|gb|ADU80775.1| Signal peptide protease IV (Protease IV) (Endopeptidase IV) [Helicobacter pylori India7] Length = 292 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSAPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGIMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|284102428|ref|ZP_06386046.1| signal peptide peptidase SppA (protease IV) [Candidatus Poribacteria sp. WGA-A3] gi|283830320|gb|EFC34553.1| signal peptide peptidase SppA (protease IV) [Candidatus Poribacteria sp. WGA-A3] Length = 322 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 127/287 (44%), Gaps = 25/287 (8%) Query: 32 EDNSPHVARIAIRGQIEDSQ----------------ELIERIERISRDDSATALIVSLSS 75 + V + I G + ++ E + + + D++ A+++ +S+ Sbjct: 36 GEGRDKVLLVEISGVLTSAKPGGVLDRFFHRPSLPARFKEELTKAADDEAVKAIVLRIST 95 Query: 76 PGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG+ A + ++ IQ++K + PVI + ++ S GY ++ A++ +VA +S+ GS+G Sbjct: 96 PGGTVTASDILYHEIQEMKKTRKVPVIASIMDLGTSGGYYVAMAADRVVAHPSSVTGSLG 155 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ ++K+GV +V S P K SPF + + + Q V+DS Y F+R++ Sbjct: 156 VIMLTLNASGLMEKIGVRADAVMSGPHKDMGSPFRTMTDQDRAIFQGVIDSLYARFLRVI 215 Query: 194 SESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + R ++ + L+DGRI++ +AK GLID +G ++ + + + + Sbjct: 216 EQGRPDLKPETIRQLADGRIYSATQAKDHGLIDGIGYLDDALELAKKEAGIEEAQVVMYR 275 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV------QGLWAVWNP 293 P + + P + + +W P Sbjct: 276 RPGGYQPNIYAQGPGAPGRTDWIFPKLDPVSLLLAGGTPAFMYLWLP 322 >gi|71892212|ref|YP_277945.1| protease IV [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796318|gb|AAZ41069.1| protease IV [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 625 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 13/242 (5%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 +A I I G I D + +I D A+++ ++SPGGS A Sbjct: 329 AKKDNQIAIICINGPIVDGPDIPGSIGGDTIAHKIRSARFDPKIKAIVLRVNSPGGSVNA 388 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + V++ KPV+ + +AAS GY IS +N+I+A+ +++ GSIG+ Sbjct: 389 SELIRLELIAVRDSGKPVVVSMGGIAASGGYWISTPANVIIASNSTITGSIGIFGIINTF 448 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + LD +G+ V +SP+ S + + + + MMQ V++SYH+F+ V+ESR Sbjct: 449 EKSLDTIGIHSDGVNTSPISNI-SITTPLPTEYINMMQLYVNTSYHYFINTVAESRCKTT 507 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + ++ G +W G +A K GLID +G ++ L + + +W K W Sbjct: 508 EDIHKIAQGHVWLGYDAIKNGLIDNIGDLDDAINKAIELAHLKEYQL--NWYENKINWID 565 Query: 262 DL 263 L Sbjct: 566 VL 567 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 80/206 (38%), Gaps = 22/206 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++I + + D T LI+SL + GS E I +A+++ K KP+ S Sbjct: 106 DIINILRQAKNDPHITGLILSLKNFCGSNQTSLEYIGKALREFKESGKPIYAISDYYNQS 165 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 YL++ +N I V G+ Y K L+ L ++ + K+ PF Sbjct: 166 -QYLLASYANKIYLTPHGFVDLRGISTSKLYYKSLLNNLKINTHIFRVGRYKSAVEPFIQ 224 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP-----------YDKTLVLSDGRIWTGA 216 +++ +V+ + +++++S +RN ++ + G T A Sbjct: 225 DQMSDHVRHEETKLVNRLWDQYLQIISINRNTTTRSIFPGINNILNELHRM-QGD--TAA 281 Query: 217 EAKKVGLIDVVGG---QEEVWQSLYA 239 A K ID + E + ++ Sbjct: 282 YALKNKWIDEIASHFVIENTMKEIFG 307 >gi|114563316|ref|YP_750829.1| signal peptide peptidase SppA, 67K type [Shewanella frigidimarina NCIMB 400] gi|114334609|gb|ABI71991.1| signal peptide peptidase SppA, 67K type [Shewanella frigidimarina NCIMB 400] Length = 614 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 11/204 (5%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I +G I + + + + DD A+++ + SPGGSA+A E I + Sbjct: 328 VAVIVAKGTILNGKQPAGQIGGESTSALLMKARFDDKVKAVVLRVDSPGGSAFASEQIRQ 387 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +K KPV+ + +AAS GY IS +++ IVA T+L GSIG+ + + L+ Sbjct: 388 EVLALKAAGKPVVVSMGSLAASGGYWISASADYIVATPTTLTGSIGIFGMFATFEQALNH 447 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 GV+ V +S SP E+NP+ ++Q ++ YH F+ LV++ R++ ++ + Sbjct: 448 FGVTSDGVATSDWAG-LSPARELNPQVAAVVQRHIERGYHEFISLVAKERHMTLEQVDNI 506 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQE 231 + GR+WTG A +GL+D +G + Sbjct: 507 AQGRVWTGKRALTLGLVDELGDMD 530 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 106/294 (36%), Gaps = 51/294 (17%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERIS 61 +F++ I + +L+++T+ ++ VED S + + G I D + ++ IE Sbjct: 24 KFIINVIF--FGLLAVITVVLLNSEDEIVVEDQSA--LVLNLSGSIVDQKHYVDPIEMAF 79 Query: 62 -------------------------RDDSATALIVSL----SSPGGSAYAGEAIFRAIQK 92 +D T++++ L + AI A+ + Sbjct: 80 SQGQANDPEGEILLADVLYTINNATQDARITSIVLDLADLRDAG---ISKMTAIGEALTQ 136 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K + + Y ++ ++ I +V G+ Y K L+KL ++ Sbjct: 137 FKAANKSVIAMANGYDQNQYFLASFADKIYLNNQGMVALDGLSRYRLYYKAALEKLKITT 196 Query: 153 KSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT------ 204 + K+ PF +++ +++++ + + +V+ +R I D+ Sbjct: 197 HVFRVGTFKSAVEPFIRDDMSDADKVASKELLNDIWQSYSTIVASNRQIAPDQLVLSTDE 256 Query: 205 ----LVLSDGRIWTGAEAKKVGLIDVVGGQEEV-WQSLYALGVDQSIRKIKDWN 253 L ++G + A + +D + + + +G D+ + K + Sbjct: 257 YLAQLDKAEGD--SAQMAVNMKWVDELVSADAFRVAMIERVGSDKEGKNFKQIS 308 >gi|217032126|ref|ZP_03437626.1| hypothetical protein HPB128_16g86 [Helicobacter pylori B128] gi|298735604|ref|YP_003728127.1| protease IV [Helicobacter pylori B8] gi|216946274|gb|EEC24882.1| hypothetical protein HPB128_16g86 [Helicobacter pylori B128] gi|298354791|emb|CBI65663.1| protease IV [Helicobacter pylori B8] Length = 292 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 122/245 (49%), Gaps = 4/245 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFVLLL----IVLVFFSAKESAPSEPPNLAKLYLNGAIFSTEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + ++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYVSKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ Y FV V+++R + ++G++++ A K+ LID + ++ L L Sbjct: 193 LVNEQYQMFVDDVAKARKLDAKDYKDFAEGKVFSAQNALKLKLIDKISTIKQAQDRLMEL 252 Query: 241 GVDQS 245 + Sbjct: 253 SKVKK 257 >gi|257093133|ref|YP_003166774.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045657|gb|ACV34845.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 316 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 10/283 (3%) Query: 8 IKTRYVMLS-LVTLTVVYFSWSSHVED-NSPHVARIAIRGQIE-----DSQELIERIERI 60 I + V++S LV + V+ W + + H A I + G IE +Q + + ++ Sbjct: 34 IFFKLVVVSYLVAVLVMVVDWGGPEQRADGRHTAVIHLHGTIEASGEASAQNINDALQAA 93 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCA 117 D +I+ ++SPGGS + I++++ P+ V ++ AS GY I+ A Sbjct: 94 FGDKGTAGVILRVNSPGGSPVQAGIVHDEIRRLRTTHPQIPLYVVVEDLCASGGYYIAVA 153 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + I + S+VGSIGVL +DKLG+ + + + K PFS + K + Sbjct: 154 GDKIFVDKASIVGSIGVLMDAFGFTGTMDKLGIERRLLTAGENKGFLDPFSPQDAKQKEH 213 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q ++ + F+ +V R +T + G +WTG+++ K+GL D G V + + Sbjct: 214 AQVLLREIHKQFIEVVRRGRGPRLKETPEMFSGLMWTGSQSVKLGLADGFGTVGSVARDV 273 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 ++ + SLLE P ++ Sbjct: 274 IKAERMVDFTIKENIAERFAKRLRADSTQGVGSLLEVIRPAVR 316 >gi|149181105|ref|ZP_01859605.1| protease IV (signal peptide peptidase) [Bacillus sp. SG-1] gi|148851192|gb|EDL65342.1| protease IV (signal peptide peptidase) [Bacillus sp. SG-1] Length = 354 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 19/269 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 + +A + + G I+D +E++ R+ DDS A+I+ ++SPG Sbjct: 74 GSAAKRIAVLEVEGVIQDVNTATSIFESPGYNHELFMEQLRRVQEDDSIRAVILKVNSPG 133 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I + +++ +KP+ + MAAS GY I+ + I A+ +L GS+GV+ Sbjct: 134 GGVVESAQIHEKLVEIQEEAKKPIYVSMGSMAASGGYYIAAPAEKIFASRETLTGSLGVI 193 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Q +K GV ++KS P K SP E+ + +++Q +V++SY FV ++++ Sbjct: 194 MQSINYSELAEKYGVDFVTIKSGPHKDIMSPTREMTEEEREILQSMVNNSYEGFVDVIAQ 253 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + D+ ++DGR++ G +AK++ LID G E+V + + + I+ N Sbjct: 254 GRGMSEDQVKKIADGRVYDGIQAKEINLIDDFGYIEDVIAQMKKDLKLEDAQVIEYTN-- 311 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + F L ++ L I K+ Sbjct: 312 -DGGFASLLDMGAKRLAGGDIEAAALMKI 339 >gi|298491184|ref|YP_003721361.1| signal peptide peptidase SppA ['Nostoc azollae' 0708] gi|298233102|gb|ADI64238.1| signal peptide peptidase SppA, 36K type ['Nostoc azollae' 0708] Length = 273 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 128/266 (48%), Gaps = 9/266 (3%) Query: 35 SPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +ARI I G I + ++E ++ + L++ + SPGG+ + I+ A+++ Sbjct: 10 RKQIARIEITGVIAGATRTRVLEALKTVEE-KKFPGLLLRIDSPGGTVGDSQEIYSALKR 68 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + + ++ ++AS G I + I++ ++ GSIGV+ + ++ L+K+GVS Sbjct: 69 LGKKTKIVASFGNISASGGVYIGMGAEHIMSNPGTITGSIGVILRGNNLERLLEKVGVSF 128 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +KS P K S E+ ++Q ++D SY FV+ ++E+R + + +DGRI Sbjct: 129 KVIKSGPYKDILSFDRELTEAEENILQQLIDVSYQQFVQTIAEARYLAVETVKGFADGRI 188 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNL-SISS 270 +TG +A ++G++D +G +E+ + L G+D K L S Sbjct: 189 FTGEQAVELGVVDRLGTEEDARRWTAELVGLDPEKTPCYTLEERKPLLSRVLPGSRQTKS 248 Query: 271 LLEDTIPLMK---QTKVQGLWAVWNP 293 + I ++ T LW ++ P Sbjct: 249 GIRAGIDWLEFEVSTSGLPLW-LYRP 273 >gi|294673079|ref|YP_003573695.1| signal peptide peptidase SppA, 67K type [Prevotella ruminicola 23] gi|294473747|gb|ADE83136.1| signal peptide peptidase SppA, 67K type [Prevotella ruminicola 23] Length = 626 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 20/255 (7%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------------ELIERIERISRDDSATALIVSL 73 S ++N +A G I DS+ + + + +++ DD A++ + Sbjct: 327 SKQKENGGKIAVYYAYGSIVDSEAMNMLEGGGHCIVGKTVADDLRKLADDDDVKAVVFRV 386 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +S GGSA A E I A++ +K +KPV+ + AAS GY IS +N I+A T++ GSIG Sbjct: 387 NSGGGSAVASEYIRHAVKLIKAKKPVVVSMGGAAASGGYWISSPANYIIAEPTTITGSIG 446 Query: 134 VLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFV 190 + P V + DKLG++ VK+ + + + ++ MQ+ ++ Y F+ Sbjct: 447 IFGLIPNVSGLVTDKLGITFDGVKTHQFAGYETELVAGKDTQEIMRQMQNYINRGYQNFL 506 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +V+E R + ++ + GR+W ++A + L+D +G ++ + L Q Sbjct: 507 NVVAEGRGLKPEQVNEIGQGRVWLASDALGIKLVDKLGSLDDAVKKAAELAKLQEYHTAA 566 Query: 251 DWNPPKNYWFCDLKN 265 P + WF L N Sbjct: 567 Y--PAEPGWFEKLMN 579 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 105/275 (38%), Gaps = 48/275 (17%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------QE 52 + +++L + S S+ + V + + G + + + Sbjct: 52 LFFVISLVGMVASDSAATKVKENSVFVLKLSGSVNERSEEGTPFDDFLGLGDTGSMGLDD 111 Query: 53 LIERIERISRDDSATALIVSLSSPGGS-----AYAGEAIFRAIQKVKNRKP-VITEVHEM 106 LI I + +D + + GGS + + A++ K ++ + Sbjct: 112 LIASIRKAKDNDDIKGIYIQ----GGSAGFDSPATAQQLRDALKDFKTSGKWIVAYANNY 167 Query: 107 A-ASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + AS Y ++ ++ I GS+ G+ + Y K DKLG+ + K K+ Sbjct: 168 SQAS--YYVATVADKIYLNGQ---GSVDLRGLGGKSEYYKGLYDKLGIKYQVAKVGKYKS 222 Query: 163 --EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WT-GAE 217 E + + ++ + Q + + ++++ ++E R + D+ L + + +T + Sbjct: 223 YVESNTLTGMSDYDREQRQAYLGGIWKYWLKEMAEGRKVKADELDKLVNDSLLAFTPAEQ 282 Query: 218 AKKVGLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 K L+D V EE+ ++ LG + I ++ Sbjct: 283 LIKSKLVDKVLFPEEIKAEIKNRLKLGKNDEINQL 317 >gi|319760562|ref|YP_004124500.1| signal peptide peptidase SppA [Candidatus Blochmannia vafer str. BVAF] gi|318039276|gb|ADV33826.1| signal peptide peptidase SppA [Candidatus Blochmannia vafer str. BVAF] Length = 619 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 12/224 (5%) Query: 29 SHVEDNSPHVARIAIRGQI----------EDSQELIERIERISRDDSATALIVSLSSPGG 78 ++N+ +A I I+G I ++ +I + A+I+ ++SPGG Sbjct: 319 PITKNNNNQIAIICIQGTIIHGNNDIAGSTGGDTIVRKIRNARFNPKIKAIILRVNSPGG 378 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S +A E I + I +N KP+I + +AAS GY IS +N I+A+ ++L GSIGV Sbjct: 379 SVHASELIRQEIIATRNSGKPIIVSMGNIAASGGYWISTPANFIIASNSTLTGSIGVFGI 438 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + LD +GV V +SP+ A S + + MMQ V++SY +F++ V++ R Sbjct: 439 INTFEDSLDTIGVHSDEVNTSPV-ANLSIAKALPNEFKNMMQLYVNTSYQYFIKTVAKFR 497 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G IW G +A K GLID +G ++ L Sbjct: 498 CKTITDIDRVAQGHIWLGYDAIKNGLIDKIGDFDDAINKAAELA 541 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 44/260 (16%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------------------QEL 53 +YF + SP + + G I D E+ Sbjct: 39 ISIYFHIKNTKNTTSPSALILNLTGIIVDKPTTYTKFQKFSKQLFNINQSHIQENSLFEI 98 Query: 54 IERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAG 111 I + + D + T LI+ L + GGS + E I +A+ + KN KP+ + + Sbjct: 99 IHILRQAKNDTNITGLILLLKNFSGGSQSSLEYIGKALYEFKNTGKPIYA-ISDHYDQIQ 157 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE-- 169 YL++ +N I V G+ Y + L L ++ + K+ PF+ Sbjct: 158 YLLASYANKIYITPQGEVNLRGISTHKLYYQSLLKNLKINTHVFRVGSYKSAIEPFTRDN 217 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK--------TLVLS--DGRIWTGAEAK 219 ++P+ + + +++++S +RNI + L G T A Sbjct: 218 MSPQVRDEENIWIHQLWDQYLKIISLNRNITTQQIFPGINKIIDELYEMQGD--TAYYAL 275 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 + +D + ++ ++ Sbjct: 276 QKKWVDEISSYSDIENTMKK 295 >gi|291288840|ref|YP_003505656.1| signal peptide peptidase SppA, 36K type [Denitrovibrio acetiphilus DSM 12809] gi|290886000|gb|ADD69700.1| signal peptide peptidase SppA, 36K type [Denitrovibrio acetiphilus DSM 12809] Length = 288 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 137/259 (52%), Gaps = 10/259 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 S +A + + G I D+++L ++++++ ++ +I+ ++SPGG + I+ I K+K Sbjct: 38 SNSIAVLRLEGVIIDTKDLDKKLKKLDANEKVKGIILEINSPGGVIAPTQVIYNRIMKMK 97 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV + +AAS GY I+ A++ + A E++ GSIGV+ QY V+ + K+G+ Sbjct: 98 --KPVYAVMESVAASGGYYIAVAADEVYALESTTTGSIGVIMQYSNVEELMSKIGIKSVV 155 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 KS +K PSP +++ + MQ ++ Y F+R V + R+I DK L+DGR+++ Sbjct: 156 FKSGKLKDVPSPTRDLSYSEKEYMQAMISEFYEQFLRDVLKRRSISEDKLRDLADGRVFS 215 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 G +A ++ LID +G +EE + Q + + ++ ++ ++ L + Sbjct: 216 GRQAVELKLIDKIGTREEAVVDMKNELGIQDLEVKELYDKDESLLSQLFTKAAV--LRSE 273 Query: 275 TIPLMKQTKVQGLWAVWNP 293 IP G + ++ P Sbjct: 274 LIP------NGGFYYIYKP 286 >gi|152992629|ref|YP_001358350.1| protease IV [Sulfurovum sp. NBC37-1] gi|151424490|dbj|BAF71993.1| protease IV [Sulfurovum sp. NBC37-1] Length = 284 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 2/231 (0%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 I + G I D+ ++++ I++ +DD ++ +++SPGG+ I AI+++K +KPVI Sbjct: 45 IKLTGPIMDADKVLKEIDKARKDDDIKGVLFNVNSPGGAVPPSIEICHAIKELKEKKPVI 104 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + AS Y S +N I+A S+VGSIGV+ + P + ++K+GV + VK Sbjct: 105 AYASGIMASGSYYASIYANKIIANPGSIVGSIGVIMEAPNLHELMEKVGVGTQIVKQGEY 164 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K +P E PK + ++ + +Y FV V+++R + + + +D I++ AKK Sbjct: 165 KEAGTPTREWTPKEREELERLTKDTYELFVSDVAKARGLDVNNSTAYADAHIFSSKRAKK 224 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 GLID + + + + AL + + +F DL SI L Sbjct: 225 AGLIDEIATKRSAKEQIAALAKVKE--PVWKEKDKLESFFEDLSTKSILKL 273 >gi|308390209|gb|ADO32529.1| putative protease [Neisseria meningitidis alpha710] Length = 328 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLTGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V Q + Sbjct: 234 GIHGEFIKAVKTGRGSRLKFQQYPDVFSGRVYTGADALKVGLVDGLGNIYSVAQDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|332535711|ref|ZP_08411463.1| protease IV [Pseudoalteromonas haloplanktis ANT/505] gi|332034886|gb|EGI71415.1| protease IV [Pseudoalteromonas haloplanktis ANT/505] Length = 588 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 128/251 (50%), Gaps = 14/251 (5%) Query: 35 SPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + VA + +G I D + + + DD A+++ + S GGS +A E Sbjct: 289 TEKVAVVVAKGTIVDGERKAGEIGGDSTAALLRKARLDDKVKAVVLRIDSGGGSMFASEV 348 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + +K KPVI + +AAS GY I+ A+N I AA +++ GSIGV + + Sbjct: 349 IRAEVLALKAAGKPVIASMSSVAASGGYWIASAANEIWAAPSTITGSIGVFGTFMTFEKT 408 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV V ++ M S +N K Q++Q V+ +Y F+ +V+++RN+ ++ Sbjct: 409 LSKIGVYSDGVATTEMAGF-SITRPLNEKMGQVIQMNVEEAYGRFLNVVADARNMTPEQV 467 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIK-DWNPPKNYWFC 261 ++ GR+W ++A ++GL+D +G +++ ++ AL ++ IK D + + Sbjct: 468 DKIAQGRVWIASQALELGLVDKLGDKQDAIEAAAALAKLNHYEVKTIKQDLSSQEKMIQN 527 Query: 262 DLKNLSISSLL 272 N SI S+L Sbjct: 528 IFGNASIKSML 538 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 23/207 (11%) Query: 51 QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 +++E I ++DD T +++ L P + I +AI K K VI Sbjct: 56 DDIVEVINEATKDDRITVILLDLQEMPKAHLNKLKQITKAIDAFKQAGKKVIAS-GYYYT 114 Query: 109 SAGYLISCASNIIVAAETSLVGSIGV--LFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPS 165 A Y I+ ++ I GS+G+ YP Y K L+KL V+ + K+ Sbjct: 115 QAQYYIASHADEIAMHPY---GSVGIEGYGMYPLYFKDALEKLEVTQHIFRVGTFKSAVE 171 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL----------SDGRIW 213 PF ++++ A + + + + + + + V+ R +DG Sbjct: 172 PFIRNDMSDAAKEANRVWLGALWSEYKQDVAAVRPFDESNFDETMDVYLEKMKAADGD-- 229 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G A +D + ++V + L L Sbjct: 230 AGKYALDHQWVDSLKTNQQVRKQLIDL 256 >gi|91069876|gb|ABE10807.1| signal peptide peptidase SppA [uncultured Prochlorococcus marinus clone ASNC1363] Length = 269 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 7/222 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +++ +++I D ALIV + SPGG+ + I+ AI Sbjct: 8 KSKKRIARIVIDEPITSSTRVSVLKALKQI-EDREFPALIVRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G Sbjct: 67 KRLKDKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + ++Q ++D SY F V++ RN+P ++ +D Sbjct: 127 IKFETVKSGVFKDILSPDKPLSEEGRGLLQGLIDESYKQFTEAVADGRNLPVEEVRKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA--LGVDQSIRKI 249 GRI+TG +A ++GL+D VG E V + L A + +D I+ + Sbjct: 187 GRIFTGTQALELGLVDKVGD-EFVARELAAEMVNIDPKIQPL 227 >gi|194324040|ref|ZP_03057815.1| peptidase [Francisella tularensis subsp. novicida FTE] gi|194321937|gb|EDX19420.1| peptidase [Francisella tularensis subsp. novicida FTE] gi|328676188|gb|AEB27058.1| Signal peptide peptidase SppA, 36K type [Francisella cf. novicida Fx1] Length = 270 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 120/262 (45%), Gaps = 16/262 (6%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVS 72 + L ++ S S ++ PH+A I + G I D ++ + + ++ + S +IV Sbjct: 1 MILLLIVPSLFSSSKELVPHIALIKVNGVIADDAEANAERINQSLDDAYANKSVKGVIVE 60 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++SPGGS + I+ +Q ++++ P + ++ AS GY I+ + I A + ++ Sbjct: 61 INSPGGSPVQSDEIYSHMQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTIT 120 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ +DKLG+ ++ S K PFS P+ + ++D ++ F Sbjct: 121 GSIGVIGSGFGFTGLMDKLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKKLLDQTHQVF 180 Query: 190 VRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + V +SR + G ++G +A+++GLID +++ + + Sbjct: 181 IAAVEKSRGDRLKDKNIDTTFSGEPFSGIQAQQMGLIDGFASVDQIRNEKF------NNI 234 Query: 248 KIKDWNPPKNYWFCDLKNLSIS 269 I D+ P ++ L S Sbjct: 235 DIVDYTRPLDFLTAVSHKLGNS 256 >gi|150399145|ref|YP_001322912.1| signal peptide peptidase SppA, 36K type [Methanococcus vannielii SB] gi|150011848|gb|ABR54300.1| signal peptide peptidase SppA, 36K type [Methanococcus vannielii SB] Length = 311 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 76/284 (26%), Positives = 146/284 (51%), Gaps = 17/284 (5%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI------------- 47 M+ V +V++ L+ + ++ + S S ++A I + G I Sbjct: 1 MKKVYTYSAAAFVIMGLLLIGIL--AVVSFDTSFSNNIAMINLDGAIFLKGSDSGLLSTG 58 Query: 48 -EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++ I+ ++ + +D+ A+I+ ++SPGG A E + R I++V +KPV+ + + Sbjct: 59 TTGVEDYIKWLDEVENNDNIKAVIIKINSPGGEVVASEKLSRKIKEVSEKKPVVAYIETI 118 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS Y+ + +SN IVA + SLVGSIGV + + ++KLGV+ S+ K +P Sbjct: 119 GASGAYMAASSSNYIVAEKQSLVGSIGVRMELLHYYGLMEKLGVNTTSITGGKYKNIGTP 178 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + + +M++ +VD Y F+ +V+E+RN+ ++TL+ +DG+I+ G +AK GLID Sbjct: 179 NRPMTEEEYKMLESIVDEMYFDFISMVAENRNMTINETLIAADGKIYNGLQAKNAGLIDQ 238 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 VG +++ R I ++ + F + +I++ Sbjct: 239 VGTEKDAIDMACKFAKISEPR-IYEYKKSSSIGFFGMTLNNIAT 281 >gi|78776884|ref|YP_393199.1| peptidase S49, SppA [Sulfurimonas denitrificans DSM 1251] gi|78497424|gb|ABB43964.1| Peptidase S49, SppA [Sulfurimonas denitrificans DSM 1251] Length = 289 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 120/238 (50%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F +K I+ + + V + + F+ S + ++ +I + G I + E++++I+ + Sbjct: 13 FTMKFIQEHFKAMIFVLILFLIFAPQSKEDLKPNNLEQINLVGPIMEVSEVLKQIDDAAA 72 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + +++++ SPGG+ I AI++ + KPVI AS Y S ++ I+ Sbjct: 73 NHFVKGILLNVDSPGGAVAPSIEIAYAIKRARESKPVIVYASGTIASGSYYASIWADEII 132 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A S+VGSIGV+ Q V + K+G+ +SV++ K + E + V+ Sbjct: 133 ANPGSMVGSIGVIMQGADVSELMSKIGIKSQSVQAGKYKKVGASDREWTEYEKNELNKVI 192 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +Y F + V+++R + +K ++ I+T ++AK+VGL+D +G + + L L Sbjct: 193 QGTYELFTKDVADARGLDINKRDFYANAHIFTASQAKEVGLVDTLGVSFDAKKRLIEL 250 >gi|158521750|ref|YP_001529620.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] gi|158510576|gb|ABW67543.1| signal peptide peptidase SppA, 36K type [Desulfococcus oleovorans Hxd3] Length = 319 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 23/286 (8%) Query: 31 VEDNSPH-VARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSS 75 +E + P +A +++ G I D E + ++ D S AL++ ++S Sbjct: 26 LEGSGPQKIAMVSVNGAITDKPTRDFMSRNHPGMLDEFVAQLALAKEDPSIKALVLKVNS 85 Query: 76 PGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGG+ A + +++ + K + KPV+ + ++AAS GY IS ++ I+A T+L GS+G Sbjct: 86 PGGTITASDIMYKELMDFKQQTGKPVVAALMDVAASGGYYISLPADHILAHPTTLTGSVG 145 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+F P V +DKLG+ +K KS K SPF + + + ++D F LV Sbjct: 146 VIFVTPRVSGLMDKLGLDMKIRKSGKHKDMGSPFRDTTAEEDALFDGIIDDMAGRFAGLV 205 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI---- 249 + R + RI+T +A GL+D VG E+ + + Sbjct: 206 EKHRADQKPDMEKIKTARIFTADDALSAGLVDQVGYLEDALAQAKKMAGLPDNAAVVTYR 265 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV--QGLWAVWNP 293 + + P + + S I L++ GL+ +W P Sbjct: 266 RTYYPNDTIYNTLVTQYGAHSGALVNIDLLESMPALKPGLYYLWWP 311 >gi|123968906|ref|YP_001009764.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. AS9601] gi|123199016|gb|ABM70657.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus marinus str. AS9601] Length = 269 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 126/222 (56%), Gaps = 7/222 (3%) Query: 33 DNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S + ++ ++++ D ALIV + SPGG+ + I+ AI Sbjct: 8 KSKKRMARIVIDEPITSSTRVSFLKALKQV-EDREFPALIVRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G Sbjct: 67 KRLKDKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + ++Q ++D SY F V+E RN+P ++ +D Sbjct: 127 IKFETVKSGVFKDILSPDKPLSEEGRGLLQGLIDESYKQFTEAVAEGRNLPVEEVRKFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA--LGVDQSIRKI 249 GRI+TG +AK++GL+D +G E V + L A + +D I+ + Sbjct: 187 GRIFTGTQAKELGLVDKIGD-EFVARELAAEMVNIDPKIQPL 227 >gi|33519890|ref|NP_878722.1| protease IV, a signal peptide peptidase [Candidatus Blochmannia floridanus] gi|33504235|emb|CAD83498.1| protease IV, a signal peptide peptidase [Candidatus Blochmannia floridanus] Length = 625 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 14/227 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSS 75 S+ + ++ +A I I+G I D + +I D ++I+ ++S Sbjct: 319 SNKQQHDNNQIAIICIQGTIIDGVNSNNISGSVGGDTIAYQIRNARFDPKIQSIILRINS 378 Query: 76 PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGGS +A E I + I +N KPVI + +AAS GY I+ +N I+A+ +++ GSIGV Sbjct: 379 PGGSVHASELIRQEIIATRNSGKPVIVSMGNIAASGGYWIATPANFIIASNSTITGSIGV 438 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 ++ LD +GV V +SP+ A S + + +MQ VD+SY +F++ V+ Sbjct: 439 FGIINTLEESLDAIGVHNDEVSTSPI-ANLSVAKALPVEFKNIMQLYVDTSYQYFIKTVA 497 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + R ++ G IWTG++A K GLID +G ++ L Sbjct: 498 KFRCKTIADLDQIAQGHIWTGSDAIKHGLIDKIGDFDDAISKAVELA 544 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 71/199 (35%), Gaps = 38/199 (19%) Query: 40 RIAIRGQIEDSQE---------------------------LIERIERISRDDSATALIVS 72 + I+G I D ++ + + D + T LI+S Sbjct: 58 VLNIKGIIVDKPTTCTKFQQISKHFLNINQSDIQENSLFYIVNILRQAKNDPNITGLILS 117 Query: 73 L-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 L + GG+ + E I + + + K K + S Y ++ +N I G Sbjct: 118 LKNFSGGNQSSLEYIGKTLLEFKKSGKLIYAISDNYNQS-QYFLASYANKIYLTPQ---G 173 Query: 131 SI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSS 185 S+ G+ Y + L L ++ + K+ PF + ++ + ++ Sbjct: 174 SVDLRGISTSKLYYQSLLKNLKINTHVFRVGAYKSAVEPFIRNNMSSQVRHEENIWINQL 233 Query: 186 YHWFVRLVSESRNIPYDKT 204 + ++ ++S +RNI + Sbjct: 234 WDQYLNIISCNRNITKQQI 252 >gi|325475502|gb|EGC78683.1| signal peptide peptidase SppA [Treponema denticola F0402] Length = 495 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 16/267 (5%) Query: 15 LSLVTLTVVYFSWSSHVED--NSPHVARIAIRGQIED-----------SQELIERIERIS 61 S+ T+ Y S++++ + + + I I G I S ++++ + Sbjct: 186 FSVTVNTIGYDSYNANFAEMPSQNSIGVIHINGAISSTGTGRIDDSAVSYKIVDLFDIAQ 245 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNI 120 D + A++V ++S GG +A E I RAI + K PV+ + +AAS Y IS +++ Sbjct: 246 GDPTVKAIVVRVNSGGGEVFASEEIRRAIDRAKASGLPVVVSMGSVAASGAYWISSSADY 305 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ ++ GSIGVL P K + K LG++ V S K S E +P+ ++ Q Sbjct: 306 IFASPYTITGSIGVLATAPSFKEAVKKYLGITSDLVYSGQ-KPSYSVLEEPSPEEKEVRQ 364 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V Y F+ V+ RN+P L+ GR+++G +A + L+D +G +E + Sbjct: 365 MEVMHIYKTFIETVARGRNLPEKTVEELAGGRVYSGEQALNLKLVDALGSLDEAVKYAAE 424 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNL 266 L +K+ P + +K++ Sbjct: 425 LANISGQYSVKEIKKPLPFTEALIKSI 451 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 63/165 (38%), Gaps = 14/165 (8%) Query: 85 AIFRAIQKVKNR-KPVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + A++ KN K + + S Y ++ ++ I V G + + K Sbjct: 16 ELGDALKVFKNSGKKIYAYA--VGYSIPSYFLASYADRIGIDPLGEVSFAGFASRPVFFK 73 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +K G+ +++ K +S ++ ++ + D ++ + ++ +RN+P Sbjct: 74 GLEEKFGIKWNVIQAGTYKGMAETYSRDNLSQNVRSNLKSMFDDLWNKYTSDIAANRNMP 133 Query: 201 YDKTLVLSD---GRI--WTG---AEAKKVGLIDVVGGQEEVWQSL 237 +K ++ I + G A + G + + +E ++ Sbjct: 134 PEKIRAFAENNNALIKKYEGNGAKAALEEGFVTDIASVDEFAANI 178 >gi|257865950|ref|ZP_05645603.1| protease/peptidase [Enterococcus casseliflavus EC30] gi|257872283|ref|ZP_05651936.1| protease/peptidase [Enterococcus casseliflavus EC10] gi|257799884|gb|EEV28936.1| protease/peptidase [Enterococcus casseliflavus EC30] gi|257806447|gb|EEV35269.1| protease/peptidase [Enterococcus casseliflavus EC10] Length = 343 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 15/230 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 D + R+++ G I D Q +E + I D + +++ +++PG Sbjct: 57 AGDQDNRIVRLSLEGTIASSSSGGLFTTESYDHQRFLEELRMIQEDPTIGGILMEVNTPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I R + K+K P+ + MAAS GY IS ++ I A + ++ GSIGV+ Sbjct: 117 GGVYESAEIARELAKIKELGIPMYVSMKNMAASGGYYISAGADKIFATDETITGSIGVIM 176 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +KLG+ + KS +K S E +++Q VD++Y FV++V+E Sbjct: 177 SGLNYAGLFEKLGIEDNTYKSGALKDVGSSTREPTEADKEVLQTYVDNAYGRFVKIVAEG 236 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQS 245 R + + ++DGRI+ G +A VGL+D +G E+ ++ A LG++ + Sbjct: 237 RGMTEEAVRKIADGRIYDGQQAVSVGLVDEIGFPEDTLAAMQADLGLEDA 286 >gi|56708744|ref|YP_170640.1| peptidase [Francisella tularensis subsp. tularensis SCHU S4] gi|110671216|ref|YP_667773.1| peptidase [Francisella tularensis subsp. tularensis FSC198] gi|134302771|ref|YP_001122739.1| signal peptidase [Francisella tularensis subsp. tularensis WY96-3418] gi|187932300|ref|YP_001892285.1| serine peptidase, S49 family [Francisella tularensis subsp. mediasiatica FSC147] gi|224457951|ref|ZP_03666424.1| serine peptidase, S49 family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371355|ref|ZP_04987356.1| S49 family protease [Francisella tularensis subsp. tularensis FSC033] gi|254875608|ref|ZP_05248318.1| signal peptidase [Francisella tularensis subsp. tularensis MA00-2987] gi|54112669|gb|AAV28968.1| NT02FT0343 [synthetic construct] gi|56605236|emb|CAG46379.1| Peptidase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321549|emb|CAL09762.1| Peptidase [Francisella tularensis subsp. tularensis FSC198] gi|134050548|gb|ABO47619.1| Signal peptidase, S49 family [Francisella tularensis subsp. tularensis WY96-3418] gi|151569594|gb|EDN35248.1| S49 family protease [Francisella tularensis subsp. tularensis FSC033] gi|187713209|gb|ACD31506.1| serine peptidase, S49 family [Francisella tularensis subsp. mediasiatica FSC147] gi|254841607|gb|EET20043.1| signal peptidase [Francisella tularensis subsp. tularensis MA00-2987] gi|282160065|gb|ADA79456.1| Signal peptidase, S49 family protein [Francisella tularensis subsp. tularensis NE061598] Length = 307 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 16/254 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSA 80 S S ++ PH+A I + G I D ++ + + ++ + S +IV ++SPGGS Sbjct: 46 SLFSSSKELVPHIALIKVNGVIADDAEANAERINQSLDDAYANKSVKGVIVEINSPGGSP 105 Query: 81 YAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I+ +Q ++++ P + ++ AS GY I+ + I A + ++ GSIGV+ Sbjct: 106 VQSDEIYSHMQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGS 165 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +DKLG+ ++ S K PFS P+ ++++D ++ F+ V +SR Sbjct: 166 GFGFTGLMDKLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKELLDQTHQVFIAAVEKSR 225 Query: 198 N--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + G ++G +A+++GLID +++ + + I D+ P Sbjct: 226 GDRLKDKNIDTTFSGEPFSGIQAQQMGLIDGFASVDQIRNEKF------NNIDIVDYTRP 279 Query: 256 KNYWFCDLKNLSIS 269 ++ L S Sbjct: 280 LDFLTAVSHKLGNS 293 >gi|331091470|ref|ZP_08340308.1| hypothetical protein HMPREF9477_00951 [Lachnospiraceae bacterium 2_1_46FAA] gi|330404026|gb|EGG83576.1| hypothetical protein HMPREF9477_00951 [Lachnospiraceae bacterium 2_1_46FAA] Length = 327 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 22/258 (8%) Query: 34 NSPHVARIAIRGQIEDSQ---------------ELIERIERISRDDSATALIVSLSSPGG 78 N +V + + G I++ + +E I+R+ D S +++ + SPGG Sbjct: 52 NREYVGVVNVVGTIQEQTTSDGIFDTSEGYQHLDTLEYIDRMKEDSSNKGILLRVDSPGG 111 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 + Y E ++ +++ + +PV T + AAS GY IS S+ I A + GSIGV+ Sbjct: 112 TVYESEELYLKLKEYQKETNRPVWTYMEHYAASGGYYISAPSDKIYANPNTTTGSIGVII 171 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + +KLG+ S+ S K S++N + + Q +VD SY FV +V++ Sbjct: 172 SGFDMTGLYEKLGIRSYSITSGKNKDM----SQMNEEQTAIYQSIVDESYGRFVEIVADG 227 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + ++ L+DGRI++ +AK GL+D +G +++ + + + I P Sbjct: 228 RKMSEEEVRKLADGRIYSAKQAKANGLVDEIGLYDDMKKDMSKEIGENVIFYEPSTEPSM 287 Query: 257 -NYWFCDLKNLSISSLLE 273 +F L++L S E Sbjct: 288 LASFFGKLESLKTKSEAE 305 >gi|110833924|ref|YP_692783.1| peptidase [Alcanivorax borkumensis SK2] gi|110647035|emb|CAL16511.1| peptidase [Alcanivorax borkumensis SK2] Length = 326 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIE 58 + K T +V L + + V+ S V HV + + G I QE ++ + Sbjct: 40 IFFKALT-FVYLFTLLVIVIPGKTGSAVTMAEAHVGIVDVNGVIAPDQEASADLIVTGLT 98 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 R ++ TA+++ ++SPGGS ++ AI++++ K + + ++ AS Y I+ Sbjct: 99 RAFEAENTTAVLLKINSPGGSPVQSNQVYNAIKRLRAEYPEKKLYAAITDVGASGAYFIA 158 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A S+VGSIGV+ ++ DKLGV + + K PFS V P Sbjct: 159 SAADEIYADPASIVGSIGVIMAGFGLEQAADKLGVERRVFTAGENKDLMDPFSPVKPAHR 218 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + +Q ++D + F+ V + R + D L G WTG A +GLID + Sbjct: 219 KHVQTMLDDIHQQFIAAVKKGRGNRLKVDGHPELFSGLFWTGERAMDLGLIDGLMS 274 >gi|332306361|ref|YP_004434212.1| signal peptide peptidase SppA, 67K type [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173690|gb|AEE22944.1| signal peptide peptidase SppA, 67K type [Glaciecola agarilytica 4H-3-7+YE-5] Length = 619 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 14/253 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 H++ N V + +G I + + + + DDS ++++ + SPGGS Sbjct: 322 PHLDTNVDKVGVVVAKGTILNGDQKPGTVGGDSTANLLRKARLDDSIKSVVLYVDSPGGS 381 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I + I+ +K KPV+ + AAS GY IS +++ I AA +++ GSIG+ + Sbjct: 382 AFASEIIRQEIENLKAAGKPVVALMSTYAASGGYWISASADEIWAAPSTITGSIGIFGMF 441 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + LD LGV V ++ ++PK Q++Q ++ Y F+ LV++ R+ Sbjct: 442 VSFENTLDYLGVHTDGVGTTDFAGMG-ITRGIDPKMGQVLQRSIEHGYDQFISLVADERH 500 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI---KDWNPP 255 + + ++ GR+W G A + L+D +G ++ + L + N Sbjct: 501 MSKEDVDSIAQGRVWIGETALSLNLVDHLGYIDDAVSAAAQLADLSEYDVTYVERSLNSS 560 Query: 256 KNYWFCDLKNLSI 268 + +W N S+ Sbjct: 561 ELFWKEFFSNASV 573 Score = 92.9 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 100/290 (34%), Gaps = 47/290 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F K ++ + + + F + + + +RG I Sbjct: 19 LNFSRKLFFNIIFLVIAIAIISLIFKDNGQIGVKQDSALVLNLRGDIVIQKHAIDPFEAF 78 Query: 51 ----------------QELIERIERISRDDSATALIVSL---SSPGGSAYAGEAIFRAIQ 91 Q+++ ++ +D AL++ L + G E I +AI Sbjct: 79 MQEALGQENEKPEVLLQDILLTLDNAKQDQRIKALVLDLQELN--GAGLDKLEQIAQAID 136 Query: 92 KVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 K + KPV + + Y I+ ++ + + G Y K LDK+ Sbjct: 137 DFKLSEKPVYA-IGDYYTQEQYYIASHADHVYMNPMGWMLFEGYGRFGMYYKSALDKIKA 195 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + K K+ P +++ A + + +++ + + V+E+R + D Sbjct: 196 TTHVFKVGTYKSAVEPLIRDDMSQAAKEANKAWLNAMWSQYKNNVAEARGLSADNFDEKV 255 Query: 209 D----------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 D G A + G +D + +E+V Q L ++ ++ ++ Sbjct: 256 DEFMVKFEDVNGDF--AQYALENGWVDGLKTREQVLQELASVVGEEDSKR 303 >gi|148926874|ref|ZP_01810552.1| protease [Campylobacter jejuni subsp. jejuni CG8486] gi|205356450|ref|ZP_03223214.1| protease [Campylobacter jejuni subsp. jejuni CG8421] gi|145844451|gb|EDK21559.1| protease [Campylobacter jejuni subsp. jejuni CG8486] gi|205345637|gb|EDZ32276.1| protease [Campylobacter jejuni subsp. jejuni CG8421] Length = 298 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VD 243 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L V Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 244 QSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 + K +D + N +L SL+E Sbjct: 255 NPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|237654702|ref|YP_002891016.1| signal peptide peptidase SppA, 67K type [Thauera sp. MZ1T] gi|237625949|gb|ACR02639.1| signal peptide peptidase SppA, 67K type [Thauera sp. MZ1T] Length = 613 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 10/205 (4%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I +G I D E I D+ AL++ + SPGGSA+A E I R Sbjct: 323 VAVIVAQGTIVDGAEPAGVVAGDTFARLIREAREDEDIKALVLRIDSPGGSAWASELIRR 382 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ + KPVI + +AAS GY I+ ++ I AA +++ GSIG+ +P L + Sbjct: 383 ELELTRQAGKPVIASMSSVAASGGYWIATGADEIWAAPSTVTGSIGIFGLFPEFSEPLRR 442 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+ + V ++P+ P ++P A + MQ ++ Y F+ +V+++R + + + Sbjct: 443 LGIGVDGVATAPLAGALDPRRPLDPAAAEAMQLGIEHGYRRFLEVVAQARKLTVAEVDAV 502 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEE 232 + GR+WTG A +GL+D +G ++ Sbjct: 503 ARGRVWTGEAASGLGLVDKLGSLDD 527 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 84/230 (36%), Gaps = 25/230 (10%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNS-----------------PHVARIAI 43 ++ V++ + ++ L L +F V+ S P +A + Sbjct: 20 LDLVVRGVFYALLIFGLGVLVSFFFHPEPEVQAGSALVLRPVGTIVEQAELEPPLALLRA 79 Query: 44 RGQIEDS---QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KP 98 G +L++ + + D AL++ GG + AI K KP Sbjct: 80 GGAPAGQLRLADLVDAVRKARDDARIAALVIETDELVGGGFSKLAELRAAIADFKASGKP 139 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ S Y ++ ++ + + V G+ Y + LDKLGV + + Sbjct: 140 VLARGERFTQS-QYYLASVADELHLSPDGFVLLRGLARYGTYFRDALDKLGVKVHVFRVG 198 Query: 159 PMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+ PF+ +++ + + +D++D + + ++ SR + Sbjct: 199 EYKSFSEPFTRSDMSDEDREATRDLLDGLWRFMRDDIAASRKLAPAAIDA 248 >gi|73667234|ref|YP_303250.1| signal peptide peptidase A [Ehrlichia canis str. Jake] gi|72394375|gb|AAZ68652.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Ehrlichia canis str. Jake] Length = 288 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 152/244 (62%), Gaps = 1/244 (0%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 + + V SL+ V S S+ DN ++A++ I G+IE S+E+ +++I++D Sbjct: 19 RFLVFLMVFASLILCNYVDISKVSNFLDNK-YIAKVNIEGKIETSEEMDSLLKKIAKDSH 77 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 LI++++SPGG+ E +++ I+ + KPV+ ++++AAS GY+ + A++ I+A Sbjct: 78 VIGLILNINSPGGTITGSEILYQNIRNIAKNKPVVAVLNDLAASGGYMTAIAADYIIARH 137 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T++ GSIGVL QY V +K+G+S+KS+KSS +KA SPF E + + ++ +V+ S Sbjct: 138 TTITGSIGVLMQYFGVSSLAEKMGISLKSIKSSNLKAATSPFEEFTKEKEESIRRIVNES 197 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y++F+ +V++ R + + L ++DG I+TG+EA +GL+D +GG++E + ++ Sbjct: 198 YNYFIDIVADRRKMEKSQVLKIADGSIYTGSEALSIGLVDQIGGEDEAISWFQSQNINTQ 257 Query: 246 IRKI 249 K+ Sbjct: 258 KVKV 261 >gi|77360352|ref|YP_339927.1| protease IV, a signal peptide peptidase [Pseudoalteromonas haloplanktis TAC125] gi|76875263|emb|CAI86484.1| protease IV, a signal peptide peptidase [Pseudoalteromonas haloplanktis TAC125] Length = 621 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELI 54 K++ R LSLV VV+ + VA + RG I D + Sbjct: 298 TFKQVSFRQ-YLSLVKPPVVF------DNPMTEKVAVVVARGTIVDGERKAGEIGGDSTA 350 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYL 113 + DD A+++ + S GGS +A E I + +K KPVI + +AAS GY Sbjct: 351 ALLRNARLDDKVKAVVLRIDSGGGSMFASEVIRAEVLALKAAGKPVIASMSSVAASGGYW 410 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A+N I AA +++ GSIGV + + L LGV V ++ M S ++ K Sbjct: 411 IASAANEIWAAPSTITGSIGVFGTFMTFENTLSNLGVYSDGVATTDMAGF-SITRPLDDK 469 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q++Q V+ +Y F+ +V+++RN+ ++ ++ GR+W A+A+++GLID +G +++ Sbjct: 470 MAQVIQMSVEEAYGRFLDVVADARNMTPEQVDNIAQGRVWIAAKAQELGLIDKLGDKQDA 529 Query: 234 WQSLYALGVDQ--SIRKIKDWNPPKNYWFCD-LKNLSISSLLED 274 ++ AL ++ IK P+ D L N S+ S+L Sbjct: 530 IKAAAALAKLNHYDVKTIKQSLSPQQKMIQDILGNASVKSMLGS 573 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 89/225 (39%), Gaps = 25/225 (11%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 G+I +++E I ++DD + +++ L P + I +A++ K K VI Sbjct: 84 GEIL-LDDIVEVINEAAKDDRISVILLDLQEMPKAHLNKLKQITKALEAFKQTGKKVIAS 142 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGV--LFQYP-YVKPFLDKLGVSIKSVKSSP 159 A Y I+ ++ + GS+ + YP Y K L+KL V+ + Sbjct: 143 -GYYYTQAQYYIAAHADEVAMHPY---GSVAIEGFGMYPLYFKEALEKLKVTQHIFRVGT 198 Query: 160 MKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--- 214 K+ PF ++++ A + + + + ++ + + V+ R D ++ Sbjct: 199 FKSAVEPFIRNDMSDAAKEANRVWLTALWNEYKQDVAAVRPFDESNFDETMD--VFLAKM 256 Query: 215 -------GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKD 251 G A +D + ++V Q L L G D+ + K Sbjct: 257 TAANGDAGQYALDNQWVDTLKTNQQVRQQLIDLVGADEKGKTFKQ 301 >gi|325207025|gb|ADZ02478.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M04-240196] Length = 328 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V Q + Sbjct: 234 GIHGEFIKAVKTGRGSRLKFQQYPDVFSGRVYTGADALKVGLVDGLGNIYSVAQDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|119897908|ref|YP_933121.1| peptidase [Azoarcus sp. BH72] gi|119670321|emb|CAL94234.1| conserved hypothetical peptidase [Azoarcus sp. BH72] Length = 303 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 122/277 (44%), Gaps = 8/277 (2%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 V ++ T + ++ + + + + A +++ G I+ ++ +I + Sbjct: 21 VFFRLLTFIYLGVILWKVADWGEPAEALAPAGGYTAMVSVEGVIDSGSEASAERVIGALR 80 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLIS 115 D + +++ ++SPGGS I I +++ + PV+ V +M AS GY ++ Sbjct: 81 SAYDDKAVRGVVLRINSPGGSPVQAGMINDEIYRLRGERPDLPVVAVVEDMCASGGYYVA 140 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I+ + SLVGSIGVL ++KLGV + + + K PFS Sbjct: 141 AAADKIMVDKASLVGSIGVLMDGFGFVGAMEKLGVERRLLAAGANKGFLDPFSPQRETQT 200 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + ++D + F+ +V + R + L G +WTGA + ++GL D G + V + Sbjct: 201 AHARGLLDDIHRQFIDVVRKGRGPRLKEGPELFSGLVWTGARSVELGLADGYGTVDSVAR 260 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 ++ + + + + F S+++ L Sbjct: 261 DVFQAEEVRDFTETRSFAERFAQRFGAGVTESLATAL 297 >gi|78779664|ref|YP_397776.1| signal peptide peptidase A [Prochlorococcus marinus str. MIT 9312] gi|78713163|gb|ABB50340.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Prochlorococcus marinus str. MIT 9312] Length = 269 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 124/221 (56%), Gaps = 5/221 (2%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + +ARI I I S +++ +++I D ALIV + SPGG+ + I+ AI Sbjct: 8 KSKKRMARILIDEPITSSTRVSVLKALKQI-EDREFPALIVRIDSPGGTVGDSQEIYSAI 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K++ VI ++AS G I AS+ IVA ++ GSIGV+ + + LDK+G Sbjct: 67 KRLKDKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKVG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++VKS K SP ++ + +++Q ++D SY F V+E RN+P ++ SD Sbjct: 127 IKFETVKSGVFKDILSPDKPLSEEGRRLLQGLIDESYKQFTEAVAEGRNLPVEEVRKFSD 186 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKI 249 GRI+TG +AK++GL+D +G + + + +D ++ + Sbjct: 187 GRIFTGTQAKELGLVDEIGDEFVAREVAAKMVNIDPKLQPL 227 >gi|108798015|ref|YP_638212.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. MCS] gi|119867110|ref|YP_937062.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. KMS] gi|108768434|gb|ABG07156.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. MCS] gi|119693199|gb|ABL90272.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. KMS] Length = 593 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 17/260 (6%) Query: 35 SPHVARIAIRGQI----------------EDSQELIERIERISRDDSATALIVSLSSPGG 78 P +A + + G I + + + D +A+++ + SPGG Sbjct: 299 KPTIAVVTLHGPIVSGRGGPGLSPLGNSSAGGDTITAALREAAADKDVSAIVLRVESPGG 358 Query: 79 SAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S E I+R + + + PV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 359 SVTGSETIWREVLRTREGGTPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVVTG 418 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + D+LGV SV+++ S S + ++ D Y FV V++ R Sbjct: 419 KLVARELKDRLGVGSDSVRTNANADAWSANSPFTDEQQAHVEAEADLFYTDFVERVADGR 478 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + D+ ++ GR+WTGA+AK GL+D +GG L + ++ P + Sbjct: 479 GLSVDEVAEVARGRVWTGADAKDRGLVDELGGLRTAIDRAKVLAGLEPDTDVRIVGYPAS 538 Query: 258 YWFCDLKNLSISSLLEDTIP 277 L+ S ++P Sbjct: 539 SLLDLLRPKQSSQPAAASLP 558 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 2/219 (0%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +A I+ G+ ++++ I R + DD LI + A + + AI +K Sbjct: 52 LAMISAGGRPMVLRQVVAAIHRAADDDRVAGLIARVQISAAPAAPVQELREAIAAFGAKK 111 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P + + Y ++ A + + VG +G +++ LDK G+ + Sbjct: 112 PSVAWAETYPGTLSYYLASAFREVWMQPSGTVGLVGFATSALFLRDALDKAGIQAQFTAR 171 Query: 158 SPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ + F+ + +++S + V+ESR + D L+D Sbjct: 172 GEYKSAANLFTQDSYTEPHREADSRLIESLNQQVLTAVAESRKLNPDDIDALADKAPLLR 231 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 A GL+D +G ++E + + L + + +P Sbjct: 232 DAAVGGGLVDRIGFRDEAYARVAELAGAEGVTPQNTDSP 270 >gi|114320584|ref|YP_742267.1| peptidase S49 [Alkalilimnicola ehrlichii MLHE-1] gi|114226978|gb|ABI56777.1| peptidase S49 [Alkalilimnicola ehrlichii MLHE-1] Length = 311 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 13/278 (4%) Query: 8 IKTRYVMLS-LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERIS 61 I + L+ LV L + + S PH+A++ + G I ++ + + ++ Sbjct: 31 IFFKLAFLAYLVALLIPFASGFLFERPTGPHLAKVNVTGLISADELASAELVNQGLQAAF 90 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCAS 118 A +++ ++SPGGS I+ I +++ + V + ++ AS Y I+ A+ Sbjct: 91 NAPRAEGVVLYINSPGGSPVQSNRIYSEINRLREQHQGMAVYAVIDDVGASGAYYIASAA 150 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I S+VGSIGV+ ++KLGV + + KA PF+ M Sbjct: 151 DEIFVNPASVVGSIGVISGGFGFTEAMEKLGVERRIYTAGENKAFLDPFAPEEEAHQAHM 210 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + +++ + F+ V R L G IWTG + ++GL D G V + + Sbjct: 211 ERLLEEVHSQFIADVRAGRGERLADDDRLFSGLIWTGESSVELGLADGFGDIAHVAREVA 270 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 GVDQ + + +P + D +SI + + Sbjct: 271 --GVDQVLDYSR--HPGLLRFITDRLGMSIGKAITRAL 304 >gi|325570031|ref|ZP_08145956.1| U7 family peptidase [Enterococcus casseliflavus ATCC 12755] gi|325156859|gb|EGC69030.1| U7 family peptidase [Enterococcus casseliflavus ATCC 12755] Length = 343 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 14/223 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 D + R+++ G I D Q +E + I D + +++ +++PG Sbjct: 57 AGDQDNRIVRLSLEGTIASSSSGGLFTTESYDHQRFLEELRMIQEDPTIGGILMEVNTPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I R + K+K P+ + MAAS GY IS ++ I A + ++ GSIGV+ Sbjct: 117 GGVYESAEIARELAKIKELGIPMYVSMKNMAASGGYYISAGADKIFATDETITGSIGVIM 176 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +KLG+ + KS +K S E +++Q VD++Y FV++V+E Sbjct: 177 SGLNYAGLFEKLGIEDNTYKSGALKDVGSATREPTEADKEVLQTYVDNAYGRFVKIVAEG 236 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + ++DGRI+ G +A VGL+D +G E+ ++ A Sbjct: 237 RGMTEEAVRKIADGRIYDGQQAVSVGLVDEIGFPEDTLAAMQA 279 >gi|167753823|ref|ZP_02425950.1| hypothetical protein ALIPUT_02108 [Alistipes putredinis DSM 17216] gi|167658448|gb|EDS02578.1| hypothetical protein ALIPUT_02108 [Alistipes putredinis DSM 17216] Length = 594 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 11/246 (4%) Query: 34 NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +S +A + G I D + L ++ ++ R+D A+++ ++SPGGSA A + Sbjct: 309 SSSQIAIVYADGAIVDGEGYGADIYGNTLAAKLAKVRRNDDVKAVVLRVNSPGGSALASD 368 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+R ++ ++ +KPVI + AAS GY ISC ++ IVA +T+L GSIGV + ++ Sbjct: 369 VIWREVELLREKKPVIVSMGSYAASGGYYISCGADAIVADKTTLTGSIGVFGMFLRLEDA 428 Query: 145 LD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L KLG++ +V+++ + + VD Y F V+E RN+P +K Sbjct: 429 LKNKLGITFDAVRTNTSADMG-VMRPLTGTERAAIMRSVDEVYETFTSYVAEGRNLPLEK 487 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L ++ GR+W+G +A +GL+D GG + +I + + Sbjct: 488 VLDIAGGRVWSGTDALALGLVDTNGGLKTAIAIAADKAELGDKFRIVEMTEAPTGFGAFF 547 Query: 264 KNLSIS 269 Sbjct: 548 SGFMAK 553 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 11/229 (4%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAG--EAIFRAIQKVKNRKPVITEVHEMAASAG 111 + IE D + + + GG A E + A+Q + I +E G Sbjct: 87 LRAIETAKNDPRIQGIYLRPN-GGGVATYAILEELREALQDFRQGGKFIIAYNETYGQGG 145 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV--KSSPMKAEPSPF-- 167 Y ++ ++ I + GV + K DKL + + + K+ P+ Sbjct: 146 YYLASVADKIYLEPHGGMQWTGVSSTLMFYKGLFDKLDIQAEIFRPTACRYKSAVEPYFL 205 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLIDV 226 S+++ + MQ +VDS ++ V+ESR I L+DG + EA G++D Sbjct: 206 SKMSNANREQMQLLVDSYWNVMAEAVAESRGIELSTLNRLADGLEVSLAQEALDHGMVDG 265 Query: 227 V---GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 + ++V++ A+ + + + DLKN+S S + Sbjct: 266 LLFEDQMDDVFREYGAVAKNDGQFEFVTLGQYVSQLNADLKNISSSQIA 314 >gi|118496733|ref|YP_897783.1| S49 family serine peptidase [Francisella tularensis subsp. novicida U112] gi|208779996|ref|ZP_03247339.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] gi|254372099|ref|ZP_04987592.1| S49 family protease [Francisella tularensis subsp. novicida GA99-3549] gi|254375246|ref|ZP_04990726.1| peptidase [Francisella novicida GA99-3548] gi|118422639|gb|ABK89029.1| serine peptidase, S49 family [Francisella novicida U112] gi|151569830|gb|EDN35484.1| S49 family protease [Francisella novicida GA99-3549] gi|151572964|gb|EDN38618.1| peptidase [Francisella novicida GA99-3548] gi|208744000|gb|EDZ90301.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] Length = 307 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 16/254 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSA 80 S S ++ PH+A I + G I D ++ + + ++ + S +IV ++SPGGS Sbjct: 46 SLFSSSKELVPHIALIKVNGVIADDAEANAERINQSLDDAYANKSVKGVIVEINSPGGSP 105 Query: 81 YAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I+ +Q ++++ P + ++ AS GY I+ + I A + ++ GSIGV+ Sbjct: 106 VQSDEIYSHMQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGS 165 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +DKLG+ ++ S K PFS P+ + ++D ++ F+ V +SR Sbjct: 166 GFGFTGLMDKLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKKLLDQTHQVFIAAVEKSR 225 Query: 198 N--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + G ++G +A+++GLID +++ + + I D+ P Sbjct: 226 GDRLKDKNIDTTFSGEPFSGIQAQQMGLIDGFASVDQIRNEKF------NNIDIVDYTRP 279 Query: 256 KNYWFCDLKNLSIS 269 ++ L S Sbjct: 280 LDFLTAVSHKLGNS 293 >gi|281424222|ref|ZP_06255135.1| signal peptide peptidase SppA [Prevotella oris F0302] gi|281401491|gb|EFB32322.1| signal peptide peptidase SppA [Prevotella oris F0302] Length = 588 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 17/254 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSATALIVS 72 + H+A G I D ++ + +E +++DD A+++ Sbjct: 290 ADDTPVTGEHIAVYYAYGDIVDKASPQSIFQDDRQIVGNDMCKDLEDLAKDDDVKAVVIR 349 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++S GGSAYA E I+ I ++K KPV+ + AAS GY +S +N IVA T++ GSI Sbjct: 350 VNSGGGSAYASEQIWHQISELKKIKPVVVSMSGAAASGGYYLSSNANWIVADPTTITGSI 409 Query: 133 GVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 G+ + KLG++ VK++ + P+ + ++Q+ V+ Y F + Sbjct: 410 GIFGLFLDRSELYTKKLGINYAEVKTNRNSVFGASGHPFTPEQLSLLQNNVNRGYMLFKK 469 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V+E R + ++ ++ GR+W G +A K+ L+D +GG ++ L + Sbjct: 470 RVAEGRKMTMEQVENIAQGRVWLGQDAIKLKLVDQLGGLDDAIAKAAKLAKMNDY-ETAS 528 Query: 252 WNPPKNYWFCDLKN 265 + P + W L + Sbjct: 529 YPSPLSTWEQLLGS 542 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 97/255 (38%), Gaps = 24/255 (9%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----------------LIER 56 + + L + S SS + V + + G + + +E ++ Sbjct: 24 FMGFMCLIGIIASSSSTTKIEDNSVLVLKLDGSMTEQEEENMMNSLQGISSLSFEGTMKA 83 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 I++ DD + + G E I +A+ + I E ++ GY ++ Sbjct: 84 IKKAKNDDKVAGIYLEAGQFGADLAQAEEIEKALLDFRKSGKWIIAYGENYSTLGYYLAS 143 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKA 174 +N I + ++ G+ + Y K L K+G+ + K K+ + ++ Sbjct: 144 TANKIYLNKDGMIEWSGIGGEKVYYKNLLAKVGIKFVTTKVGKYKSAVEQLTADNISDAD 203 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW---TGAEAKKVGLIDVVGGQE 231 + Q +D ++ + V+++R++ D +D R+ T +K L+D + + Sbjct: 204 REQTQRYLDGWWNTILATVAKNRSLNKDSLNAYAD-RVITLETPENMQKYKLVDGLIYND 262 Query: 232 EVWQ-SLYALGVDQS 245 ++ LG+D+ Sbjct: 263 QIADIVRKQLGIDKE 277 >gi|327404497|ref|YP_004345335.1| signal peptide peptidase SppA, 67K type [Fluviicola taffensis DSM 16823] gi|327320005|gb|AEA44497.1| signal peptide peptidase SppA, 67K type [Fluviicola taffensis DSM 16823] Length = 592 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 8/243 (3%) Query: 32 EDNSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + ++A I G I S E+ + + DD ++ ++SPGGSA A E Sbjct: 306 GSATANIAVIVGEGGITVDGDEMTSDEICKYFREVRNDDDIKVVVFRVNSPGGSALASEE 365 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+R + +K VI + ++AAS GY ++ ++ I A T++ GSIGV PY F+ Sbjct: 366 IWREVSLTTKKKKVIVSMGDVAASGGYYVATPASTIFAEPTTITGSIGVFGVIPYTGGFM 425 Query: 146 D-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + KLG++ V+++ + S +++P+ + ++Q VD Y F + V++ R + D+ Sbjct: 426 ENKLGLTFDRVQTNKH-SVLSTNRKLSPEELTLIQGEVDQIYLQFKKRVADGRGLKIDQV 484 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ GR+WTGA+A K+GL+D +GG + + + I ++ + Sbjct: 485 HRIARGRVWTGADALKIGLVDKLGGFNDALAFAIKEAKVKKAQVIYYPKVKEDPIEDLFE 544 Query: 265 NLS 267 LS Sbjct: 545 QLS 547 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 15/213 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEV--HE 105 +++ +E+ D + + L G+ I ++ K I E Sbjct: 81 DILMGLEKAKEDKRVKGIYLEL----GNVQCGYATAMEIRNGLKDFKKSGKFIVAYLNGE 136 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK--SSPMKAE 163 + Y IS SN + TS + IG+ + + K DKLG+ ++ ++ ++ K+ Sbjct: 137 VITQKQYYISSVSNEVYGFSTSAMEFIGLGGELMFFKNTFDKLGIEMQVIRGSNNDFKSA 196 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKK 220 P+ ++++ + Q + S + ++ R + + +++ +I +A K Sbjct: 197 VEPYFRTDMSDSSRVQTQRYMSSIWEDVRSQIAADRKVTAAQLNDIAENAKIQRVDDAVK 256 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + LID ++EV + + ++++ I + Sbjct: 257 LKLIDGAKYRDEVEEIVLKKSGLKNLKDIMAFE 289 >gi|121613641|ref|YP_999794.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81-176] gi|167004769|ref|ZP_02270527.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81-176] gi|1655731|gb|AAC44524.1| PspA [Campylobacter jejuni subsp. jejuni 81-176] gi|87249010|gb|EAQ71972.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81-176] Length = 298 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VD 243 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L V Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 244 QSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 + K +D + N +L SL+E Sbjct: 255 NPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|325523003|gb|EGD01426.1| protease IV [Burkholderia sp. TJI49] Length = 261 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 11/218 (5%) Query: 7 KIKTRYVMLS---LVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIE 58 KI R+ L+ L+ ++ FS + + H A + I G+I ++ ++ ++ Sbjct: 44 KIFFRFAFLAVLVLLAFALIDFSSDAKFSSSGRHTALVTIDGEIAAGTNANADDINTALD 103 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLIS 115 DD +++ ++SPGGS ++ I++++ + KP+ V +M AS GY I+ Sbjct: 104 AAFDDDGTAGVVLRINSPGGSPVQAGMVYDEIRRLRAKYPDKPLYVVVTDMCASGGYYIA 163 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + S+VGSIGVL +DKLGV + S K PFS PK Sbjct: 164 SAADKIFVDKASIVGSIGVLMDGFGFTGLMDKLGVQRRLHTSGENKGFYDPFSPETPKMD 223 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 Q+++D + F++ V + R +T + G W Sbjct: 224 AHAQELLDQVHAQFIKAVKDGRGKRLHETPDMFSGLFW 261 >gi|153801836|ref|ZP_01956422.1| protease IV [Vibrio cholerae MZO-3] gi|124122608|gb|EAY41351.1| protease IV [Vibrio cholerae MZO-3] Length = 556 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 15/235 (6%) Query: 21 TVVYFSWSSHVEDNS----PHVARIAIRGQIEDS---------QELIERIERISRDDSAT 67 + Y+ + + ++ + +A + G I D + + D + Sbjct: 306 AIGYYEYKTTIKPTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVK 365 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + SPGGSA+A E I I+ +K KPV+ + +AAS GY IS +++ IVA T Sbjct: 366 AVVLRVDSPGGSAFASEVIRNEIEALKTAGKPVVVSMSSLAASGGYWISMSADKIVAQPT 425 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +L GSIG+ + L LG+ V ++P + + + A +Q ++ Y Sbjct: 426 TLTGSIGIFSVITTFEKGLSNLGIYTDGVGTTPFSGQG-LTTGLTQGAKDAIQLGIEHGY 484 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 F+ LV+E R + L+ GR+WT +A+ +GL+D +G ++ L Sbjct: 485 QRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLA 539 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 39/275 (14%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ---------- 51 F+ + +LS+ + +Y + + A + + G I + Sbjct: 21 FIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPIDSFT 80 Query: 52 ---------------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN 95 +++E + D++ T L+++L P + I +AI + K Sbjct: 81 GSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKA 140 Query: 96 R-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV S Y ++ ++ I A V G Y K L+KL V+ Sbjct: 141 SGKPVFAVGDFYNQS-QYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHV 199 Query: 155 VKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-----NIPYDKTLVL 207 + K+ PF +++ A + + + +V V+ +R + + Sbjct: 200 FRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFV 259 Query: 208 SDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLYA 239 + + G A KKVGL+D + +++V Q+L Sbjct: 260 AQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAE 294 >gi|255322018|ref|ZP_05363168.1| signal peptide peptidase SppA, 36K type [Campylobacter showae RM3277] gi|255301122|gb|EET80389.1| signal peptide peptidase SppA, 36K type [Campylobacter showae RM3277] Length = 289 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 2/272 (0%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 + + I T + + + + + F N P++ +I + G I D+ E +E+IE +D Sbjct: 14 IFRFINTYFKAMLFLLIVFLIFFSGKGESVNPPNLTQINLSGAIMDAGEALEKIEAARKD 73 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + +++ + SPGG+ + A++ ++ KPV+ S Y +N I+A Sbjct: 74 GNIKGVLLYIDSPGGALAPSVELHLAVKNLRAAKPVVAYAGGSMTSGSYYAGAGANKILA 133 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +GSIGV+ Q K+GVS + VK+ K + + + +Q++V+ Sbjct: 134 NPGAFIGSIGVIMQGADASELAAKIGVSQQVVKAGEYKEAGTFLRPWSKIEREQLQELVN 193 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +SY FV V+ RN+ +K+ ++ R++ ++A K+GLID V L L Sbjct: 194 ASYEMFVSDVAADRNLDANKSKEWANARVFLASDAAKLGLIDEVSDYYSARAELEKLSGV 253 Query: 244 QSI--RKIKDWNPPKNYWFCDLKNLSISSLLE 273 K + + N IS+ E Sbjct: 254 AEPVWAKPSVYEKAMQKFINQGANSLISAFFE 285 >gi|89255457|ref|YP_512818.1| peptidase [Francisella tularensis subsp. holarctica LVS] gi|115313986|ref|YP_762709.1| protease [Francisella tularensis subsp. holarctica OSU18] gi|167009293|ref|ZP_02274224.1| S49 family protease [Francisella tularensis subsp. holarctica FSC200] gi|169656469|ref|YP_001427444.2| S49 family peptidase [Francisella tularensis subsp. holarctica FTNF002-00] gi|254366865|ref|ZP_04982903.1| peptidase, S49 family [Francisella tularensis subsp. holarctica 257] gi|254368438|ref|ZP_04984455.1| serine peptidase [Francisella tularensis subsp. holarctica FSC022] gi|290953102|ref|ZP_06557723.1| S49 family peptidase [Francisella tularensis subsp. holarctica URFT1] gi|295313688|ref|ZP_06804271.1| S49 family peptidase [Francisella tularensis subsp. holarctica URFT1] gi|89143288|emb|CAJ78449.1| Peptidase [Francisella tularensis subsp. holarctica LVS] gi|115128885|gb|ABI82072.1| S49 family protease [Francisella tularensis subsp. holarctica OSU18] gi|134252693|gb|EBA51787.1| peptidase, S49 family [Francisella tularensis subsp. holarctica 257] gi|157121332|gb|EDO65533.1| serine peptidase [Francisella tularensis subsp. holarctica FSC022] gi|164551537|gb|ABU60488.2| peptidase, S49 family [Francisella tularensis subsp. holarctica FTNF002-00] Length = 307 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 16/254 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSA 80 S S ++ PH+A I + G I D ++ + + ++ + S +IV ++SPGGS Sbjct: 46 SLFSSSKELVPHIALIKVNGVIADDAEANAERINQSLDDAYANKSVKGVIVEINSPGGSP 105 Query: 81 YAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I+ +Q ++++ P + + AS GY I+ + I A + ++ GSIGV+ Sbjct: 106 VQSDEIYSHMQYLQHKYPTIPMYAVCTNVCASGGYYIAAGAKDIYANKMTITGSIGVIGS 165 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +DKLG+ ++ S K PFS P+ ++++D ++ F+ V +SR Sbjct: 166 GFGFTGLMDKLGIERRTYTSGENKDFLDPFSPQKPEQTAQFKELLDQTHQVFIAAVEKSR 225 Query: 198 N--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + G ++G +A+++GLID +++ + + I D+ P Sbjct: 226 GDRLKDKNIDTTFSGEPFSGIQAQQMGLIDGFASVDQIRNEKF------NNIDIVDYTRP 279 Query: 256 KNYWFCDLKNLSIS 269 ++ L S Sbjct: 280 LDFLTAVSHKLGNS 293 >gi|323699137|ref|ZP_08111049.1| signal peptide peptidase SppA, 36K type [Desulfovibrio sp. ND132] gi|323459069|gb|EGB14934.1| signal peptide peptidase SppA, 36K type [Desulfovibrio desulfuricans ND132] Length = 335 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 21/280 (7%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 + +A I +RG + QEL+ ++ DD A++V++ SPGG Sbjct: 51 GEGPGKIALIHLRGFLSTEPAQGMLRSQPSAVQELVNNLKLAEADDQVGAVVVAIDSPGG 110 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 + A + ++ + K R KPV+ + ++AAS GY + ++ IVA T++ GS+GV+F Sbjct: 111 TTTASDVLYHELTAFKQRTGKPVVAAMFDVAASGGYYAALPADWIVAHPTTITGSVGVVF 170 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P + +DK+GV ++ KS K SPF P+ + Q ++D F LV E Sbjct: 171 MRPKLNGLMDKVGVDVEVSKSGRDKDMGSPFRPTTPEEEALFQGIIDDMAARFYALVQEH 230 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--- 253 R++ + R++T ++A +GLID +G ++ + L K+ + Sbjct: 231 RHLTPAHLETVKTARVFTASQALSIGLIDQIGYVQDAFAKARDLAGLDPECKVVTYRRDM 290 Query: 254 -PPKNYWFC-DLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 P N + D SLL + + G VW Sbjct: 291 YPDDNPYNTLDSAEPYKPSLLGVDAGFVLPPRA-GFCYVW 329 >gi|304382981|ref|ZP_07365462.1| signal peptide peptidase SppA [Prevotella marshii DSM 16973] gi|304335900|gb|EFM02149.1| signal peptide peptidase SppA [Prevotella marshii DSM 16973] Length = 591 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 68/285 (23%), Positives = 128/285 (44%), Gaps = 18/285 (6%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISRDDS 65 L++ + +A G I +Q++ + ++ + DD Sbjct: 285 LSIADMANVKEGSSEGEQIAVYYAEGGIVQTSLSGTFSGGQEIVAQDVCKDLKELMEDDD 344 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++S GGS+YA E ++ I ++K +KPV+ + AAS GY +SC ++ IVA Sbjct: 345 VKAVVIRVNSHGGSSYASEQLWHQITELKKKKPVVVSMGGYAASGGYYMSCGADWIVAQP 404 Query: 126 TSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEP--SPFSEVNPKAVQMMQDVV 182 T+L GSIG+ +P + L +KLGV VK++ A N + ++Q V Sbjct: 405 TTLTGSIGIFGAFPDMSGLLTEKLGVRFDEVKTNRNSAFSFIRTAHPFNAEETALLQAYV 464 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + Y F + V++ R + ++ G +WTG +A ++GL+D +GG +E L Sbjct: 465 NRGYTLFRKRVADGRKRSVEAIENMAQGHVWTGRDALRIGLVDQLGGLDEAIAKAAKLAK 524 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 +++ ++ ++ S L+D + Q Sbjct: 525 LDEYY-TENYPEEADFIDQLFASVGRRSYLDDQLRAALGEYYQPF 568 Score = 90.2 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 95/264 (35%), Gaps = 38/264 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-------------------EL 53 + + L+++ + S S + V + + G I+D ++ Sbjct: 23 IFIGLMSIVGMLASESQTKNVSENSVLVMNMAGVIQDKTQPNILGKLTGENIAQLGLSDI 82 Query: 54 IERIERISRDDSATAL-----IVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMA 107 + +++ +D + ++ + I A K VI + + Sbjct: 83 LSAVKKAKNNDDIKGIYIEAGLLQAD-----YATLQEIRNAFLDFKKSGKWVIAYADDYS 137 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ ++ I + G+ + + K K GV + VK K+ + Sbjct: 138 -QGAYYLASVADKIYINPQGTLDWHGLAARPVFYKDLYAKFGVKYQVVKVGRYKSFTEQY 196 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV---G 222 +E ++ + + ++ ++ + VSESR I D +D R +AK++ Sbjct: 197 TEEKMSDANREQVSAFLNGTWKDICQAVSESRKISVDSLNAYAD-RFMLLTDAKELLKYR 255 Query: 223 LIDVVGGQEEVWQSL-YALGVDQS 245 +ID + +++ + LG++ Sbjct: 256 MIDGLLYADQIKPEVCKRLGIEPD 279 >gi|194477179|ref|YP_002049358.1| signal peptide peptidase SppA (protease IV) [Paulinella chromatophora] gi|171192186|gb|ACB43148.1| signal peptide peptidase SppA (protease IV) [Paulinella chromatophora] Length = 276 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 134/261 (51%), Gaps = 6/261 (2%) Query: 37 HVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +ARI + G I +E + + R + + +++ + SPGG+ + I A+ +++N Sbjct: 12 KIARICLEGPITGVVREWMLSVLRNVEEQRMSGILLRIDSPGGTVGDSQEIHAALLRLRN 71 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V+ ++AS G I A++ IV+ ++ GSIGV+ + + L+++G+ ++ Sbjct: 72 KGCKVVASFGNISASGGVYIGVAADKIVSNPGTITGSIGVVLRGNNLAKLLERIGIRFET 131 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +KS K SP ++P ++QD++DSSY+ FV +++ R + DGRI++ Sbjct: 132 IKSGIYKDILSPDRALSPAERNVLQDLIDSSYNQFVAAIAQGRGLKESFVREFGDGRIFS 191 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 GA+A +GL+D +G +E Q L L VD + K ++ + + N +I S + Sbjct: 192 GAQALDLGLVDALGDEETALQLLSQLADVDLNQTKTLTFSRYGSKTKQSIMNENIFSKFQ 251 Query: 274 DTIPLMKQTKVQGLW---AVW 291 + + ++ W A+W Sbjct: 252 QAFKIQQALSLELDWSGQALW 272 >gi|86154048|ref|ZP_01072249.1| PspA [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842462|gb|EAQ59676.1| PspA [Campylobacter jejuni subsp. jejuni HB93-13] Length = 298 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VD 243 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L V Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 244 QSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 + K +D + N +L SL+E Sbjct: 255 NPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|86151511|ref|ZP_01069726.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 260.94] gi|157414382|ref|YP_001481638.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81116] gi|315123672|ref|YP_004065676.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841858|gb|EAQ59105.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 260.94] gi|157385346|gb|ABV51661.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 81116] gi|307747028|gb|ADN90298.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni M1] gi|315017394|gb|ADT65487.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315930942|gb|EFV09918.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 327] Length = 298 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVVDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VD 243 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L V Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 244 QSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 + K +D + N +L SL+E Sbjct: 255 NPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|125973935|ref|YP_001037845.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum ATCC 27405] gi|256005058|ref|ZP_05430029.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum DSM 2360] gi|125714160|gb|ABN52652.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Clostridium thermocellum ATCC 27405] gi|255991026|gb|EEU01137.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum DSM 2360] gi|316939864|gb|ADU73898.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum DSM 1313] Length = 326 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 20/252 (7%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIV 71 S S +P++ +++ G I DS +E ++ IE + S +++ Sbjct: 39 LSDSESSLPLTPYIGVVSVEGTIMDSNSTTSFLSNGYNHKETLKLIEDMKNSASNKGILL 98 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++SPGG Y + ++ +++ K +PV T + A S GY IS AS+ + + + Sbjct: 99 YVNSPGGGVYESDELYLKLKEYKEETGRPVWTYMSNQACSGGYYISMASDKVFSNRNAWT 158 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ +K D LG+ + S KA + E+ + ++Q +VD +Y F Sbjct: 159 GSIGVIISLTNLKGLYDNLGIKGIYITSGRNKAMGAADLELTDEQRDILQSLVDEAYEQF 218 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V +V+E R + ++ ++DGRI + +A ++ LID + +EV ++ A + + Sbjct: 219 VEIVAEGRKMTVEEVKRIADGRILSAKQALELNLIDEIATYDEVKEAFSA-----ELGNV 273 Query: 250 KDWNPPKNYWFC 261 K + P K F Sbjct: 274 KIYTPKKKDPFG 285 >gi|119493252|ref|ZP_01624092.1| protease IV [Lyngbya sp. PCC 8106] gi|119452725|gb|EAW33903.1| protease IV [Lyngbya sp. PCC 8106] Length = 607 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 127/255 (49%), Gaps = 9/255 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ + I G I D + L +++ ++ D A+++ ++SPGGSA A Sbjct: 316 NSKNKIGIIYAEGSIVDGEGVGDQIGGDSLAKKLRKLRMDKEVKAVVLRVNSPGGSATAS 375 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I R ++ ++ +KPVI + AAS GY IS A++ I A ++ GSIGV V+ Sbjct: 376 EIIGREVELLQAQKPVIVSMGNFAASGGYWISMAASQIFAESNTITGSIGVFGVLFNVQD 435 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++ GV+ V++ + P+ + +Q VVD+ Y F+ VSESR++P K Sbjct: 436 IANENGVTWDVVQTGRYANINTVSRPKTPEELARIQKVVDAIYERFLTKVSESRDLPKSK 495 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR+W+G +A+K+GL+D +GG + + + K++++ + + L Sbjct: 496 VAEIAQGRVWSGIQAEKIGLVDQIGGIQAAIAAAAEQAKLEDDWKLEEYPEGETFEQQIL 555 Query: 264 KNLSISSLLEDTIPL 278 + + + L Sbjct: 556 ETFIGGESTQASSTL 570 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 31/247 (12%) Query: 21 TVVYFSWSSHVEDNSPH--VARIAIRGQIEDS------QELIERIERISRDDSATALIVS 72 +V+ F S ++ D P + + + EDS + ++E +E S+DD L + Sbjct: 50 SVLVFDLSLNITDADPEYDTSELFQKALAEDSFNQIKLRTILEGLEEASQDDRIVGLYLK 109 Query: 73 LSSPGGSAYA-------GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAA 124 G++ + +A++K + KP+I + Y ++ +N IV Sbjct: 110 -----GTSNPTSTGLANSTEVRQALEKFRESGKPIIAYDLDWTEPE-YYLASVANTIVVN 163 Query: 125 ETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQ 179 +GS+ G+ + ++ +K G+ ++ + K+ PF +++ + + Q Sbjct: 164 P---LGSVEMNGLSSEIMFLAGAFEKFGIGVQVTRVGKYKSAVEPFLLKQMSSENREQTQ 220 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++D + ++ VS SR + + ++DG+ I EA K L+D V +EV L Sbjct: 221 KLLDDIWGKYITTVSPSRQLNASQLQQIADGQGILMAPEAVKSKLVDKVAHFDEVIVDLK 280 Query: 239 ALGVDQS 245 L + Sbjct: 281 KLTGEPE 287 >gi|281418096|ref|ZP_06249116.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum JW20] gi|281409498|gb|EFB39756.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum JW20] Length = 326 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 119/242 (49%), Gaps = 20/242 (8%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +P++ +++ G I DS +E ++ IE + S +++ ++SPGG Y Sbjct: 49 TPYIGVVSVEGTIMDSNSTTSFLSNGYNHKETLKLIEDMKNSASNKGILLYVNSPGGGVY 108 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + ++ +++ K +PV T + A S GY IS AS+ + + + GSIGV+ Sbjct: 109 ESDELYLKLKEYKEETGRPVWTYMSNQACSGGYYISMASDKVFSNRNAWTGSIGVIISLT 168 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K D LG+ + S KA + E+ + ++Q +VD +Y FV +V+E R + Sbjct: 169 NLKGLYDNLGIKGIYITSGRNKAMGAADLELTDEQRDILQSLVDEAYEQFVEIVAEGRKM 228 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ ++DGRI + +A ++ LID + +EV ++ A + +K + P K Sbjct: 229 TVEEVKRIADGRILSAKQALELNLIDEIATYDEVKEAFSA-----ELGNVKIYTPKKKDP 283 Query: 260 FC 261 F Sbjct: 284 FG 285 >gi|15678828|ref|NP_275945.1| protease IV [Methanothermobacter thermautotrophicus str. Delta H] gi|2621896|gb|AAB85306.1| protease IV [Methanothermobacter thermautotrophicus str. Delta H] Length = 287 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 132/261 (50%), Gaps = 13/261 (4%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE----------DSQELIERIE 58 K +++++++ + S + +E +A I + G I D ++ E I Sbjct: 6 KIVVGLVAVLSIAGLVLSLAGLLEGGEGTIAIIPVHGAIAYDTAGFSDGVDPDDIKELIA 65 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + D S A+++ ++SPGG+ A E + AI K+ KPV++ + + S YL + AS Sbjct: 66 EANSDPSVKAIVLDINSPGGTPVASEELMDAIN--KSEKPVVSWISDSGTSGAYLAASAS 123 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + IVA+ ++ VGSIGV+ + ++G++ ++K+ K + + + + QM+ Sbjct: 124 DRIVASPSAWVGSIGVILDLTDLSQMYRQMGINKYAIKAGEYKDMGADYRMITDEERQML 183 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q +V+ Y +F++ V+ +RN+ L++GRI+TG +A + L+D GG++ + Sbjct: 184 QSMVNEEYDYFIKTVAANRNLSVSYVKSLAEGRIFTGRQAVRNRLVDFTGGKDYAVEVAA 243 Query: 239 ALGVDQSIRKIKDWNPPKNYW 259 L ++ I PP + Sbjct: 244 KLAGVKNYNTI-TLEPPSGFL 263 >gi|256820055|ref|YP_003141334.1| signal peptide peptidase SppA, 67K type [Capnocytophaga ochracea DSM 7271] gi|256581638|gb|ACU92773.1| signal peptide peptidase SppA, 67K type [Capnocytophaga ochracea DSM 7271] Length = 590 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%) Query: 34 NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + +A I G+I + +I + + S + A+++ ++SPGG A A E Sbjct: 306 SKNKIAVIYADGEIMQGEGRAEIVGNETIIRALRKASDNKDIKAIVLRINSPGGDALASE 365 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + R I+ K +K V + AAS GY I+C +N I A ++ GSIGV P V Sbjct: 366 LMHREIEVTKKKKKVYVSMGNYAASGGYYIACNANRIFAEAGTITGSIGVFGVIPNVNAL 425 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 G++ ++V + P S F + + + M + ++ Y F+ V++ R + Sbjct: 426 ATNWGINAETVSTHPNAQFYSVFQKPTEQFKKEMTESIEQVYTVFLDRVAKGRGKTVAQI 485 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ GR+W+G EA GL+D +G + + R + Sbjct: 486 DSIAQGRVWSGKEALANGLVDEIGSLNDAIAYAAKDNGLKEYRTV 530 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 93/209 (44%), Gaps = 17/209 (8%) Query: 51 QELIERIERISRDDSATALIVSLSSPG--GSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ IE D + + S G G + + +A++ K + + + Sbjct: 84 NATLKAIENAKTDKRIKGIYLK--STGNIGGLAFAQELRKALEDFKTSGKFVLAYSDEIS 141 Query: 109 SAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y + ++ + ++ +GS+ G+ + + K +K GV ++ ++ K+ Sbjct: 142 QLDYYLQTVADKVYISQ---LGSVALRGLSSEVLFFKGLQEKSGVQMEVIRHGKYKSAVE 198 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKK 220 PF ++++ + + +++ + ++ V +++SRNIP +K ++ GR T AK Sbjct: 199 PFLDNKMSDNNRKQLTELLSAMWNVIVTDIAKSRNIPVEKLNEIATNVGGR--TAQLAKN 256 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GLID + ++E Q + +SI K+ Sbjct: 257 NGLIDGILFRDEFEQIICDKTGSKSIDKV 285 >gi|260435894|ref|ZP_05789864.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. WH 8109] gi|260413768|gb|EEX07064.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. WH 8109] Length = 275 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 6/257 (2%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 I + G I + +++ + + R AL++ + SPGG+ + I A+ +++ + Sbjct: 21 IVVDGPITGDTRKRVLKALREVKR-REFPALLLRIDSPGGTVGDSQEIHAALLRLREQGC 79 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G I A+ IVA ++ GSIGV+ + + +K+G+ +VKS Sbjct: 80 RVVASFGNISASGGVYIGVAAEKIVANPGTITGSIGVILRGNDLSRVFEKIGIRFDTVKS 139 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 P K SP ++ ++Q+++DSSY FV +V+ RN+ + +DGR+++G + Sbjct: 140 GPFKDILSPDRPLSDAERALLQELIDSSYGQFVGVVARGRNLELETVKCFADGRVFSGEQ 199 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 A+ +GL+D +G ++ + L +D + + L + L+ + Sbjct: 200 AQALGLVDELGDEDHARRLAAQLADLDADDIRPVTLGKQRRKLSGLLPGSQLLHQLQQRL 259 Query: 277 PLMKQTKVQGLWAVWNP 293 + Q LW ++ P Sbjct: 260 SIELMGSGQVLW-LYRP 275 >gi|307822687|ref|ZP_07652918.1| signal peptide peptidase SppA, 36K type [Methylobacter tundripaludum SV96] gi|307736291|gb|EFO07137.1| signal peptide peptidase SppA, 36K type [Methylobacter tundripaludum SV96] Length = 321 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 9/237 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDSQE-----LIERIERISRDDS 65 +V L V +Y + D+ H A I + G I + +E +IE + +D Sbjct: 46 FVYLIAVFGVAMYPKLKQDIGVDSKDHTAVIDVVGMIAEGKEANADSIIESLRNAVKDKH 105 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIV 122 +I+ +SPGGS ++ I+K+K P+ V ++ AS Y I AS+ I Sbjct: 106 TKGIILHANSPGGSPVQSSYVYEEIRKIKKEHPELPIYAVVSDICASGCYFIVSASDKIF 165 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 +SLVGSIGVL + KLGV + + KA PFS Q +Q ++ Sbjct: 166 VNPSSLVGSIGVLMDGFGFVDGMQKLGVERRLFTAGAHKAMLDPFSPSKEDETQYIQSLL 225 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + F+ V R + + G +WTG E K+G++D VG Q+ V + L Sbjct: 226 NQVHQQFIGAVKAGRGDRLKENPDMFSGLVWTGEEGVKLGIVDGVGNQDYVAKELIG 282 >gi|159905972|ref|YP_001549634.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C6] gi|159887465|gb|ABX02402.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C6] Length = 307 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 131/243 (53%), Gaps = 14/243 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------QELIERIE 58 V L ++ V + +S ++A I + G I + I+ I+ Sbjct: 11 VFLVIILFLVGFILLIPGDGISSKNIAMINLDGTISSQTSEAGLFSDFEPSVNDYIKWID 70 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +D + A+++ ++SPGG A A E + R I++ ++K VI + M SA Y + ++ Sbjct: 71 DAEKDSNIKAIVIKINSPGGEAIASEKLARKIKEASDKKVVIAYIETMGTSAAYQAASST 130 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + IVA + +LVG+IGV Q + ++KLG++I ++KS K SP + + +M Sbjct: 131 DYIVAEKQALVGNIGVRMQIIHYYGLMEKLGINISTIKSGEYKDMGSPTRPMTEEEQKMF 190 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + +VD SY+ FV V+E+RN+ ++TL ++DG+I++G +A+KVGL+D+ G + + Sbjct: 191 ESIVDESYYEFVSWVAENRNMTINETLEVADGKIYSGTQAQKVGLVDMTGTKADAIDIAS 250 Query: 239 ALG 241 + Sbjct: 251 KMA 253 >gi|304314958|ref|YP_003850105.1| protease [Methanothermobacter marburgensis str. Marburg] gi|302588417|gb|ADL58792.1| predicted protease [Methanothermobacter marburgensis str. Marburg] Length = 287 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 128/251 (50%), Gaps = 12/251 (4%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE----------DSQELIERIERISRD 63 ++ +++++ + S S + + VA I + G I ++ IE + D Sbjct: 11 LIVVLSISGLVMSISGFIGEAEGTVAIIPVHGAIAYDSAGFSDAVSPDDIKNLIEEANSD 70 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 S A+++ ++SPGG+ A E + AI+ K+ KPV++ + + S YL + AS+ IVA Sbjct: 71 PSVKAIVLDINSPGGTPVASEELMDAIK--KSEKPVVSWISDSGTSGAYLAASASDRIVA 128 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + ++ VGSIGV+ + ++G++ ++K+ K + + + + QM+Q +V+ Sbjct: 129 SPSAWVGSIGVILDLTDLSEMYRQMGINKYAIKAGEYKDMGADYRMITDEERQMLQSMVN 188 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y +F+R V+ +RN+ L++GRI+TG +A K L+D GG++ L Sbjct: 189 EEYDYFIRTVAANRNLSVSYVRGLAEGRIFTGRQALKNRLVDYTGGRDYAVDVAAKLAGL 248 Query: 244 QSIRKIKDWNP 254 ++ + P Sbjct: 249 KNYDTVTLEPP 259 >gi|254673921|emb|CBA09705.1| signal peptide peptidase SppA, 36K type [Neisseria meningitidis alpha275] Length = 328 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|57168750|ref|ZP_00367881.1| protease IV (PspA) [Campylobacter coli RM2228] gi|305432508|ref|ZP_07401670.1| signal peptide peptidase SppA [Campylobacter coli JV20] gi|57019797|gb|EAL56480.1| protease IV (PspA) [Campylobacter coli RM2228] gi|304444547|gb|EFM37198.1| signal peptide peptidase SppA [Campylobacter coli JV20] Length = 298 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 122/242 (50%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + V+K I T + L+ + + SS+ + ++ RI ++G+I DS EL+E+I Sbjct: 11 LGSVIKFINTYFKTFVLLLIVIWLLVPSSNSSSSYANLERIDLKGEILDSSELLEKIISA 70 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 +D+ ++ + SPGG+ + AI+ +K +KPVI AS YL +N Sbjct: 71 KNNDNIKGVLFVIDSPGGAFAPSMELALAIKDLKTKKPVIAYASGTMASGSYLAGVGANK 130 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S +GSIGV+ Q + K+G+ +++++ K+ + + + + +Q+ Sbjct: 131 ILANPASFIGSIGVIMQGADLSELAKKIGIKEQTIQAGEFKSAGTFTRAWSEEEREFLQN 190 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++D SY F V++ R++ DK ++ R++ AK +GLID + E + L L Sbjct: 191 LIDESYDLFSEFVAKERDLELDKRKDWANARVFLAQNAKDLGLIDELSNYENAKKELQEL 250 Query: 241 GV 242 Sbjct: 251 AK 252 >gi|78212133|ref|YP_380912.1| signal peptide peptidase A [Synechococcus sp. CC9605] gi|78196592|gb|ABB34357.1| signal peptide peptidase SppA, 36K type [Synechococcus sp. CC9605] Length = 273 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 125/257 (48%), Gaps = 6/257 (2%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 I + G I + + ++ + + + AL++ + SPGG+ + I A+ +++ + Sbjct: 19 IVVDGPITGATRKRVLNALREVKQ-REFPALLLRIDSPGGTVGDSQEIHAALLRLREQGC 77 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G I A+ IVA ++ GSIGV+ + + +K+G+ +VKS Sbjct: 78 RVVASFGNISASGGVYIGVAAEKIVANPGTITGSIGVILRGNDLSRVFEKIGIRFDTVKS 137 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 P K SP ++ ++Q+++DSSY FV +V++ RN+ + +DGR+++G + Sbjct: 138 GPFKDILSPDRPLSDAERALLQELIDSSYGQFVGVVAQGRNLELETVKRFADGRVFSGEQ 197 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 A+ +GL+D +G ++ + L +D + + L + L+ + Sbjct: 198 AQALGLVDELGDEDHARRLAAQLADLDTDDIRPVTLGKQRRKLSGLLPGSQLLHQLQQRL 257 Query: 277 PLMKQTKVQGLWAVWNP 293 + Q LW ++ P Sbjct: 258 SIELMGSGQVLW-LYRP 273 >gi|218767314|ref|YP_002341826.1| putative protease [Neisseria meningitidis Z2491] gi|121051322|emb|CAM07607.1| putative protease [Neisseria meningitidis Z2491] gi|319409577|emb|CBY89869.1| putative peptidase [Neisseria meningitidis WUE 2594] gi|325129241|gb|EGC52080.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis OX99.30304] Length = 328 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|257875577|ref|ZP_05655230.1| protease/peptidase [Enterococcus casseliflavus EC20] gi|257809743|gb|EEV38563.1| protease/peptidase [Enterococcus casseliflavus EC20] Length = 343 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 14/223 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 D + R+++ G I D Q +E + I D + +++ +++PG Sbjct: 57 AGDQDNRIVRLSLEGTIASSSSGGLFTTESYDHQRFLEELRMIQEDPTIGGILMEVNTPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 G Y I R + K+K P+ + MAAS GY IS ++ I A + ++ GSIGV+ Sbjct: 117 GGVYESAEIARELAKIKELGIPMYVSMKNMAASGGYYISAGADKIFATDETITGSIGVIM 176 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +KLG+ + KS +K S + +++Q VD++Y FV++V+E Sbjct: 177 SGLNYAGLFEKLGIEDNTYKSGALKDVGSATRKPTEADKEVLQTYVDNAYGRFVKIVAEG 236 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + ++DGRI+ G +A VGL+D +G E+ ++ A Sbjct: 237 RGMTEEAVRKIADGRIYDGQQAVSVGLVDEIGFPEDTLAAMQA 279 >gi|315638324|ref|ZP_07893504.1| signal peptide peptidase SppA [Campylobacter upsaliensis JV21] gi|315481591|gb|EFU72215.1| signal peptide peptidase SppA [Campylobacter upsaliensis JV21] Length = 293 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 133/277 (48%), Gaps = 7/277 (2%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 ++ I T + + L V FS SS V + ++ RI ++G+I D+ ++E+I D Sbjct: 14 IISYINTYFKTFLFLLLLVWLFSPSSSV--SVANLERIDLKGEILDTGAVLEKIINAKND 71 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + ++ + SPGG+ + AI+ +K +KPVI+ AS YL A++ I A Sbjct: 72 PNIKGVLFFIDSPGGAFAPSMELALAIKDLKAQKPVISYAAGTMASGSYLAGVAADKIYA 131 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +GSIGV+ Q + K+G+ +++K+ K + E + + +Q +++ Sbjct: 132 NPAAFIGSIGVIAQGMNISELAQKIGIKEQTIKAGTFKEAGTFTREWSEEERAYLQRLIN 191 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +SY FV V++ R + D+ +D R++ EAK +GLID + E+ + L L Sbjct: 192 NSYMLFVEFVAKERGLKVDEKEKWADARVFLANEAKNLGLIDSLSNYEQAKKELEILSKV 251 Query: 244 -----QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 + KI + N + +LL+++ Sbjct: 252 ANPVWKEADKIDQFLEKLNQQSVQFFSTLSKNLLQNS 288 >gi|52841976|ref|YP_095775.1| signal peptide peptidase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629087|gb|AAU27828.1| signal peptide peptidase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 318 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-------SSHVEDNSPHVARIAIRGQIEDS-----QEL 53 +K + ++++ +++ +VY S+ ++ + H+ I I G+I DS Sbjct: 30 RKRRWKWIIRAIILAVLVYSSYKIVSVAKTTEASKDKEHIGLIDINGEIADSSSASADNF 89 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASA 110 + IE+ R ALIV ++SPGGS E I+ +Q K+ KP +M ASA Sbjct: 90 TKGIEKAYRSKGLKALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASA 149 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y ++ ++ I A+ S+VGSIGVL+ L KLG+S + S KA PFS Sbjct: 150 AYYVAVGADEIYASPASMVGSIGVLYNGFGFVDALQKLGISRRLQTSGVNKAFLDPFSPT 209 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +Q ++D + F+ V E R G WTG +A GLID Sbjct: 210 TEFQKEKLQTMLDIVHKQFITRVKEGRGNRLHVDDETFSGLFWTGEQALASGLIDGYASS 269 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 ++ + + I I D+ +N + KNL + + D +P++ K Sbjct: 270 GQLAREVI------KITDIVDYTYKQNVFDRLTKNLGTA--MADELPVILGMK 314 >gi|302878040|ref|YP_003846604.1| peptidase S49 [Gallionella capsiferriformans ES-2] gi|302580829|gb|ADL54840.1| peptidase S49 [Gallionella capsiferriformans ES-2] Length = 313 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 16/289 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIE 58 + K+ T + ++ + + +F S H A + ++G I LI ++ Sbjct: 30 IFFKVLTFGYLFVILFVLMGWFDKSETALSTGKHTALVDMQGVIAADSAASADNLIPGLQ 89 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 +D +I+ ++SPGGS I I++++ + P + V ++ AS GY ++ Sbjct: 90 AAFKDKGTQGVILRINSPGGSPVQAGQINDEIRRLRVKYPAIPLYVVVEDICASGGYYVA 149 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I + SL+GSIGVL ++KLGV + V + K PFS V P Sbjct: 150 AAADKIFVDKASLIGSIGVLMDGFGFTGTMEKLGVERRLVTAGSNKGFMDPFSAVRPDQQ 209 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + + ++ + F+ +V + R +T G +W G ++GL D G E V + Sbjct: 210 EYAKQMLAQIHQQFIDVVKQGRGKRLKETPDTFSGLVWNGQAGIEMGLADGYGSVESVAR 269 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + ++ D+ + F D + + I Q+ V Sbjct: 270 DVI------KAEEVVDFTVKEG--FADRLAKRFGAGVASAISFSTQSGV 310 >gi|257452656|ref|ZP_05617955.1| protease IV [Fusobacterium sp. 3_1_5R] gi|317059195|ref|ZP_07923680.1| protease IV [Fusobacterium sp. 3_1_5R] gi|313684871|gb|EFS21706.1| protease IV [Fusobacterium sp. 3_1_5R] Length = 564 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 4/266 (1%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 YFS ++A + + G IED ++ ++ I +D + +I+ ++SPGGSA Sbjct: 290 YFSLVKMKTRPKNYLALLNLEGTIEDETLFLDEVKAIQKDQNVKGIILRINSPGGSALVA 349 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++ A++K++ + PV + AAS GY ++ A I A+ S+ GSIGV+ P Sbjct: 350 DTMYHAVKKLREKIPVYVSISGTAASGGYYVAAAGEKIFASPLSVTGSIGVVSMIPNFSN 409 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K V+ +S+ S ++ + +++ Y F+ +VS +RNI D Sbjct: 410 LEKKANVTTESISKGKYADLYSYLQPLSEENYNRIREGNLGVYQDFLEVVSSNRNIKKDF 469 Query: 204 TLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 L+ GR+W G EAK+ GLID +GG E YAL D+ + + KN F Sbjct: 470 LDKNLAQGRVWLGIEAKENGLIDELGGLEATI---YALEQDKKLGTLPILQVSKNDVFGQ 526 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLW 288 L + ++ LW Sbjct: 527 YLGKYRKFLSVLPSSMQQKVPKDRLW 552 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 120/320 (37%), Gaps = 50/320 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------ 50 F +K + + ++ +V + Y S + E + + + Sbjct: 22 FFIKLVLSLILLAIVVGTFISYISKENTTEIKQGSYVLLRASSPLSEHIPIPDPLSLQEK 81 Query: 51 ----QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEV 103 E++ ++ I +D +++ S + E I +QK++ K VIT + Sbjct: 82 HMTFFEVLYALDSIRQDQRIQGVLLDADFLSW--NKAQLEEIGNKLQKLEEEGKKVITTL 139 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGS-IGVL-FQYPYVKPFLDKLGVSIKSVKSSPMK 161 E+ + Y ++ + IV S I ++ Y K LD+ GVSI + K Sbjct: 140 QEVNRN-NYFLASYTKEIVMTPIHAASSNISPYHYEELYWKNLLDRFGVSINVIPIGDYK 198 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S+++ + + M ++D SY + + ++ +R + + + +G + G Sbjct: 199 SYMENYSHSQMSKEFRENMTRLLDKSYDYSIEAIANNRKLEKNTLKAWIENGE-FMGTSF 257 Query: 217 -EAKKVGLI----------DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + GLI D +G ++ + + + +K PKNY Sbjct: 258 PTLFEKGLITKGEYPNRIRDEIG--DDKI-----ISIQEYFSLVKMKTRPKNYLALLNLE 310 Query: 266 LSI--SSLLEDTIPLMKQTK 283 +I +L D + +++ + Sbjct: 311 GTIEDETLFLDEVKAIQKDQ 330 >gi|317503476|ref|ZP_07961513.1| signal peptide peptidase SppA [Prevotella salivae DSM 15606] gi|315665427|gb|EFV05057.1| signal peptide peptidase SppA [Prevotella salivae DSM 15606] Length = 588 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 17/258 (6%) Query: 34 NSPHVARIAIRGQIEDS---QELIERIERISRDD------------SATALIVSLSSPGG 78 + H+A G I D Q + + +I +D A+++ ++S GG Sbjct: 296 SGKHIAVYYAYGDIVDKASPQSIFQDARQIVGNDMCKDLKDLADDDDVEAVVIRVNSGGG 355 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SAYA E I+ I +++ KPV+ + AAS GY +SC ++ I+A T++ GSIG+ + Sbjct: 356 SAYASEQIWHQISELRKVKPVVVSMGGAAASGGYYLSCNADWIIADPTTITGSIGIFGLF 415 Query: 139 PYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P L KLG+ VK++ + P+ + ++Q ++ Y F + V+E R Sbjct: 416 PDWSELLTKKLGIKYAEVKTNRNAVFGASGHPFTPEQLSLLQQNINRGYMLFKKRVAEGR 475 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +P ++ GR+W G +A K+ LID +GG ++ + L K + + Sbjct: 476 QLPMYLVEKIAQGRVWLGQDAIKLKLIDQLGGLDDAIEKAAKLANLTDY-KTASYPSQLS 534 Query: 258 YWFCDLKNLSISSLLEDT 275 W + + + S L D+ Sbjct: 535 SWEQLIGSYTGSDDLLDS 552 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 98/263 (37%), Gaps = 30/263 (11%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----------------LIER 56 ++ + L + + S+ + + V + + G + + E + Sbjct: 24 IIGFLCLIGLIATSSTTTKIDKNSVLVLKLDGNMTEQNEENVMNSLQGVSTLSFEGTMNA 83 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAA-SAGYLI 114 I++ +D + + G E I +A+Q + +I + + S Y + Sbjct: 84 IKKAKENDKVAGIYLEAGQFGADLAQAEEIEKALQDFRKSGKWIIAYGEDYSTLS--YYL 141 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNP 172 + A+N I + V G+ + Y K L K G+ + K K+ + ++ Sbjct: 142 ASAANKIYMNKQGGVEWAGIGGEKVYYKNALAKFGIKFITTKVGKYKSAVEQMTADSISD 201 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA---KKVGLIDVVGG 229 + Q +D ++ + V+++R++ D +D R+ + A K ++D + Sbjct: 202 ADREQTQRYLDGWWNTILTTVAQNRHLNKDSLNAYAD-RVISLEPAENILKYKMVDGLIY 260 Query: 230 QEE---VWQSLYALGVDQSIRKI 249 ++ V + + D I KI Sbjct: 261 NDDISGVVKKQLGIDQDDDINKI 283 >gi|315225469|ref|ZP_07867282.1| signal peptide peptidase SppA [Capnocytophaga ochracea F0287] gi|314944567|gb|EFS96603.1| signal peptide peptidase SppA [Capnocytophaga ochracea F0287] Length = 590 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%) Query: 34 NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + +A I GQI + +I + + S + A+++ ++SPGG A A E Sbjct: 306 SKNKIAVIYADGQIMQGEGRAEIVGNETIIRALRKASDNKDIKAIVLRINSPGGDALASE 365 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + R I+ K +K V + AAS GY I+C +N I A ++ GSIGV P V Sbjct: 366 LMHREIEVTKKKKKVYVSMGNYAASGGYYIACNANRIFAEAGTITGSIGVFGVIPNVNAL 425 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 G++ ++V + P S F + + + M + ++ Y F+ V++ R + Sbjct: 426 ATNWGINAETVSTHPNAQFYSVFQKPTEQFKKEMTESIEQVYTVFLDRVAKGRGKTVAQI 485 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ GR+W+G EA GL+D +G + + R + Sbjct: 486 DSIAQGRVWSGKEALANGLVDEIGSLNDAIAYAAKDNGLKEYRTV 530 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 93/209 (44%), Gaps = 17/209 (8%) Query: 51 QELIERIERISRDDSATALIVSLSSPG--GSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ IE D + + S G G + + +A++ K + + + Sbjct: 84 NATLKAIENAKTDKRIKGIYLK--STGNIGGLAFAQELRKALEDFKTSGKFVLAYSDEIS 141 Query: 109 SAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y + ++ + ++ +GS+ G+ + + K +K GV ++ ++ K+ Sbjct: 142 QLDYYLQTVADKVYISQ---LGSVALRGLSSEVLFFKGLQEKSGVQMEVIRHGKYKSAVE 198 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKK 220 PF ++++ + + +++ + ++ V +++SRNIP +K ++ GR T AK Sbjct: 199 PFLDNKMSDNNRKQLTELLSAMWNVIVTDIAKSRNIPVEKLNEIATNVGGR--TAQLAKN 256 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GLID + ++E Q + +SI K+ Sbjct: 257 NGLIDGILFRDEFEQIICDKTGSKSIDKV 285 >gi|242310759|ref|ZP_04809914.1| protease IV [Helicobacter pullorum MIT 98-5489] gi|239523157|gb|EEQ63023.1| protease IV [Helicobacter pullorum MIT 98-5489] Length = 291 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 14/288 (4%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +F++K K ++L + + F S +N +VARI ++G I S +E I + Sbjct: 11 FDFIMKYFKALVLLLIVFLIFAPSFKES----ENPANVARIDLKGAILQSDSFLEEITEL 66 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + + +++ + SPGG+ I + I+++KN+KP++ AS Y+ +N Sbjct: 67 ENNPNIKGILLVIDSPGGAIAPSVEISQTIKRIKNKKPIVAYAQGSMASGSYMAGMWANK 126 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA S++GSIGV+ V +KLG+ + +K+ K + N + +M+++ Sbjct: 127 IVANSGSMIGSIGVILNGVDVSELAEKLGIKTQILKAGIYKEAGTFMRPWNKQEEEMLRN 186 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ Y FV+ V E+R + K + GRI + A K+GLID VGG E +L+ L Sbjct: 187 LINEQYWLFVKEVVEARKLDIKKEKDFAQGRILSANNALKLGLIDSVGGIYEAQNTLFEL 246 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + +K D +L + ++ + + L Q + GL+ Sbjct: 247 AKIEEPMWLKK----------DKMDLYLERIIGENVSLGIQRAIYGLY 284 >gi|15677940|ref|NP_275112.1| putative protease [Neisseria meningitidis MC58] gi|7227382|gb|AAF42435.1| putative protease [Neisseria meningitidis MC58] gi|261393443|emb|CAX51088.1| putative peptidase [Neisseria meningitidis 8013] gi|316984012|gb|EFV62991.1| peptidase family S49 family protein [Neisseria meningitidis H44/76] gi|325127273|gb|EGC50210.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis N1568] gi|325139441|gb|EGC61981.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis CU385] gi|325201167|gb|ADY96622.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis H44/76] Length = 328 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|169630869|ref|YP_001704518.1| protease IV SppA [Mycobacterium abscessus ATCC 19977] gi|169242836|emb|CAM63864.1| Possible protease IV SppA (endopeptidase IV) [Mycobacterium abscessus] Length = 583 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 16/241 (6%) Query: 34 NSPHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSPGG 78 + P + + + G I + + E + DDS A+++ + SPGG Sbjct: 289 SRPAIGVVTLAGPIVSGRSGPRLFPPGPASGGDVIAEALRDAVADDSVAAIVLRVDSPGG 348 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S E I+R + + + KPV+ + +A S GY ++ +++ I+A ++ GSIGVL Sbjct: 349 SVNGSETIWREVVRAREAGKPVVVSMGSVAGSGGYYVAMSADAIIANPGTVTGSIGVLTG 408 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 K +KLGV S++++ S + +++ +D Y FV+ V++ R Sbjct: 409 KFITKGLKEKLGVGSDSLRTNANADAWSSNEPFTDEQRDLVEAEIDMHYEDFVQRVADGR 468 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 N+ D ++ GRIW+G +A + GL+D +GG E L + ++ N P + Sbjct: 469 NLTVDAVKAVAQGRIWSGKDALEHGLVDELGGFREAVAKAKQLADIGADDNVRIANFPSS 528 Query: 258 Y 258 Sbjct: 529 P 529 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 2/198 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 I I R D LI + P +A A + + AI+ KP + ++ Y Sbjct: 64 TIAAIHRAIEDPRVAGLIARVQIPPAAAGAVQELRAAIEAFSAVKPSLAWSETYPSTLAY 123 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--V 170 ++ A + + VG IG + +++ LDK GV + + K+ + F+E Sbjct: 124 YLASAFGEVWMQPSGTVGLIGFAAKGTFLRGALDKAGVEAQFLTRGQYKSAANLFTEDGY 183 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + +++S V+ SR + + L+D +A GL+D +G + Sbjct: 184 TDAQREADGRLLESLSEQVRDSVAVSRKLDPAEVDALADRAPLRRTDAVAGGLVDRIGYR 243 Query: 231 EEVWQSLYALGVDQSIRK 248 +E + + L Q R Sbjct: 244 DEAYARIGELIGLQDDRD 261 >gi|283955512|ref|ZP_06373007.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 1336] gi|283792973|gb|EFC31747.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 1336] Length = 298 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINTKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 245 SI--RKIKDWNPPKNYWFCDLKNLSISSLLE 273 + ++ + N NL SL+E Sbjct: 255 NPVWKEENKIDKFLNRLEGQASNLISKSLIE 285 >gi|57237078|ref|YP_178090.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni RM1221] gi|57165882|gb|AAW34661.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni RM1221] gi|315057509|gb|ADT71838.1| protease IV (PspA) [Campylobacter jejuni subsp. jejuni S3] Length = 298 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILMPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VD 243 SY F V + R + +K ++ R++ A+AK++GLID + E + L L V Sbjct: 195 SYDLFTGFVVKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 244 QSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 + K +D + N +L SL+E Sbjct: 255 NPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|328797928|dbj|BAH10025.2| probable peptidase [Pseudomonas putida] gi|328797942|dbj|BAC41612.2| probable peptidase [Pseudomonas resinovorans] Length = 311 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 22/291 (7%) Query: 9 KTRYVMLSLVTLTVVYFSWSS--HVEDNSPHVARIAIRGQIEDSQE-----LIERIERIS 61 R L +V V + V + P A+I +RG I D +E L + + Sbjct: 28 FFRLATLGIVVTAFVVGGRADLDGVGADVPVTAKIKVRGVIADGEEASAENLKRSLGKAF 87 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCAS 118 +++ A+I+ ++SPGGS ++ +++++ P V + ++ AS GY I+ A+ Sbjct: 88 ENENTKAVILEINSPGGSPVQAGHVYDEVRRLRALHPDTKVYAVITDLGASGGYYIASAA 147 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I A + SLVGSIGV + KLGV ++ S KA F NP+ + Sbjct: 148 DEIFADKASLVGSIGVTAASFGYVELMQKLGVERRAYTSGEHKAFLDQFQPQNPEERKFW 207 Query: 179 QDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + V+ ++++ F+R V R + + L G IWTG +A +GL+D +G + V + Sbjct: 208 EGVLKTTHNQFIRSVEAGRGDRLKAKENPDLYSGLIWTGEQAVGLGLVDRLGDSDYVARE 267 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + KI D+ +N D I + + D + L + GL Sbjct: 268 VVG------VSKIVDFTRKQNPL--DRFASKIGASVADQLSL--RLGFDGL 308 >gi|304388757|ref|ZP_07370815.1| probable protease [Neisseria meningitidis ATCC 13091] gi|304337321|gb|EFM03497.1| probable protease [Neisseria meningitidis ATCC 13091] Length = 328 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|296122406|ref|YP_003630184.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] gi|296014746|gb|ADG67985.1| signal peptide peptidase SppA, 36K type [Planctomyces limnophilus DSM 3776] Length = 338 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 26/299 (8%) Query: 15 LSLVTLTVVYFSWSSHVED--------NSPHVARIAIRGQIED--SQELIERIERISRDD 64 + L YF+ S V + + +A + + G I ++ +I +IE + D+ Sbjct: 38 MGLYATFRDYFARSPEVSERFLSGNSSTTQRIAVLRVSGTIMPPLTERIIRQIEVAAEDE 97 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS---NII 121 +++++ SPGG I+ A++K++ +KP+ ++ +AAS GY I+ + I Sbjct: 98 RVKGVLLTIDSPGGFVADSHQIYHALEKLRAKKPISIQMKRLAASGGYYIAMGAGTKGQI 157 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A T+ GSIGV+ + ++K+GVS +K+ K SPF + ++ +++ Sbjct: 158 FAEPTTWTGSIGVIIPRYDMSELVEKIGVSSDPLKTGEFKDALSPFHPLTEAERKVWEEI 217 Query: 182 VDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ S+ F+ L+ +R+ + ++ L+ G+I+T +A+ G+ID +G +E+ +L Sbjct: 218 LNQSFEQFIELIDTNRDTLDREQARKLATGQIYTARDARANGMIDEIGFEEDALAALQKS 277 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG------LWAVWNP 293 +R ++ + P+ L +L + S E+ Q V W P Sbjct: 278 LKLDQVRVVEYRSQPQ------LVDLLLGSRTENVTAAQWQALVDATTPRAMFLFSWLP 330 >gi|296313748|ref|ZP_06863689.1| signal peptide peptidase SppA [Neisseria polysaccharea ATCC 43768] gi|296839673|gb|EFH23611.1| signal peptide peptidase SppA [Neisseria polysaccharea ATCC 43768] Length = 328 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 10/273 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALLAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V Q + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVAQDVVKAP 293 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 D+ F S+S L+ Sbjct: 294 DVVDYTPKDDFGRILGRRFGAELKASVSEALQS 326 >gi|317152403|ref|YP_004120451.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] gi|316942654|gb|ADU61705.1| signal peptide peptidase SppA, 36K type [Desulfovibrio aespoeensis Aspo-2] Length = 329 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 19/279 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGG 78 D +A I + G + QEL+ + D +++++ SPGG Sbjct: 45 GDGDGKLALIHLTGFLAAQPRQGMLRSTPSQVQELVSALALAEADTEVKGVVLAIDSPGG 104 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 + A + ++ I K R K V+ + ++AAS GY + ++ I+A T++ GS+GV+F Sbjct: 105 TTTASDILYHEIADFKQRTGKKVVVAMFDVAASGGYYAALPADWILAHPTTITGSVGVVF 164 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P + DK+GV ++ KS K SPF P+ + Q ++D F+ LV++ Sbjct: 165 MRPKLHGLFDKIGVDVEVSKSGEDKDMGSPFRPTTPEEAALFQAIIDDYAARFLALVAKH 224 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--- 253 R + ++ R++T +A GL+D VG ++ + AL ++ + Sbjct: 225 RALTPQNMALVRTARVFTANQALAAGLVDQVGYIQDAFARARALSGLADNARVVTYRRET 284 Query: 254 -PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 P N + + L G + VW Sbjct: 285 YPNDNPYNTMTSADPAKASLLGVDASFIMPPRAGFYYVW 323 >gi|325981472|ref|YP_004293874.1| peptidase S49 [Nitrosomonas sp. AL212] gi|325530991|gb|ADZ25712.1| peptidase S49 [Nitrosomonas sp. AL212] Length = 314 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 16/257 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 V H A I +RG I + ++ + +D + +I+ ++SPGGS Sbjct: 58 DGKVRLTDKHTALIDLRGTITADSMNSADKINSSLRSAFQDKNTKGVILRINSPGGSPVQ 117 Query: 83 GEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I I++++ + P + V ++ AS GY I+ A++ I + SL+GSIGVL Sbjct: 118 AGYINDEIRRLRAKYPDIPLYAIVGDICASGGYYIAVAADKIYVDKASLIGSIGVLMDSF 177 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L+KLG+ + + + K+ PFS ++P + ++ + F+++V + R Sbjct: 178 GFTGTLEKLGIERRLLTAGENKSFLDPFSPLDPVQIDHATKLLREVHEQFIQVVKQGRGE 237 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + G IWTG ++ +GL D +G E V + + + D+ P + Sbjct: 238 RLKNDPDIFSGIIWTGQKSIDLGLTDAIGNAEYVAREII------KAETLTDFTPREG-- 289 Query: 260 FCDLKNLSISSLLEDTI 276 D+ + S ++ + I Sbjct: 290 LSDVFSKRFSQIISNFI 306 >gi|256829567|ref|YP_003158295.1| signal peptide peptidase SppA, 67K type [Desulfomicrobium baculatum DSM 4028] gi|256578743|gb|ACU89879.1| signal peptide peptidase SppA, 67K type [Desulfomicrobium baculatum DSM 4028] Length = 611 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 11/260 (4%) Query: 24 YFSWSSHVEDNSPH-VARIAIRGQI---------EDSQELIERIERISRDDSATALIVSL 73 Y + S + S + I RG I S+ + E + +D + A+++ L Sbjct: 309 YLAMSPSGQTASKEVIGIIRARGAILPGKQPENMTGSESIAELFQMARQDPTVLAVVLRL 368 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGGSA A E I I + + KPV+ + +AAS Y I+ +N IVAA T+L GSI Sbjct: 369 DSPGGSAAASEEIHHEIARTQEAGKPVVVSMGSVAASGAYWIAAGANRIVAAPTTLTGSI 428 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G+ +P + LG++ + ++P+ +P ++ ++ + + ++ Y F+ Sbjct: 429 GIFAAFPTFEDTAMNLGITTDGIGTTPLADLGNPLRPLSAQSERAIGHLLRFGYDLFIDR 488 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+ R +P + GR++ G EA L+D +G ++ ++ +L + + Sbjct: 489 VASGRRLPAADVENSAQGRVFLGQEALSRKLVDQLGDLDDALKTAASLAGLTVVNSKELR 548 Query: 253 NPPKNYWFCDLKNLSISSLL 272 P ++ S + L Sbjct: 549 RAPSSHEKLLQTFFSTAQAL 568 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 98/286 (34%), Gaps = 56/286 (19%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------------------- 49 + +L ++ L V+F+ + V + G + + Sbjct: 29 FFLLVVIILFGVFFT-DTEETLRQNSVLVVNPAGALVEQRNAPKPAEALLRKMGRETAKA 87 Query: 50 ----SQELIERIERISRDDSATALIVSLSSP----GGSAYAGEAIFRAIQKVKNR-KPVI 100 +Q++I+ I + + D + A+++ P G I +AI K KPV+ Sbjct: 88 DETKTQDIIDAIRKAATDSNILAMVID---PRDLQGCDTTKLLDIGKAILDFKETGKPVL 144 Query: 101 T-EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + YL++ ++ I V G Y K LDK ++ + Sbjct: 145 AHSM--VYTQGQYLLASYADTISVNPLGGVMITGFGMYQTYFKGLLDKTRINFHVFRVGD 202 Query: 160 MKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-------- 209 K PF ++ +A + ++ + + ++ S++R + + Sbjct: 203 YKTAVEPFVRESMSEEAKEAGREWLGGLWQAYLDEASKNRGVSPSDITSYVENIDTRLAA 262 Query: 210 --GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 G A L+D + + Q L ++ +K++D N Sbjct: 263 VGGD--AARLAVTAKLVDEIKTSTQFDQLLAG----KTGKKVEDLN 302 >gi|85059328|ref|YP_455030.1| protease 4 [Sodalis glossinidius str. 'morsitans'] gi|84779848|dbj|BAE74625.1| protease IV [Sodalis glossinidius str. 'morsitans'] Length = 616 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 22/269 (8%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +A I G I D ++I D A++ ++SPGGS A E Sbjct: 322 GGQIAVIFANGAIIDGPETPGSVGGDTTADQIRDARMDPDIKAIVFRVNSPGGSVTASEV 381 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + KPV+ + +AAS GY +S +N I+A+ ++L GSIG+ V+ Sbjct: 382 IRSELAAARAAGKPVVISMGGIAASGGYWVSTPANYIIASASTLTGSIGIFGVVNTVENS 441 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD +GV V +SP+ S + + QMMQ V++ Y F+ LV++SR+ ++ Sbjct: 442 LDSIGVHTDGVATSPLADV-SLTKTLPAEFSQMMQLSVENGYRNFITLVAQSRHKTPEEI 500 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G +W G++A + GL+D VG ++ L ++K + + W+ D Sbjct: 501 DKIGQGHVWIGSDAVQNGLVDRVGDFDDAVSKAAELA------QLKQY---QLNWYLDDP 551 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L +LL + L W P Sbjct: 552 GLW--NLLFTQTSASVYALLPQLIQSWLP 578 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 79/200 (39%), Gaps = 13/200 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK-NRKPVITEVHEMAAS 109 ++++ + + D + T L++SL G+ A E I +A+++ + + KP+ V + + Sbjct: 96 DVVDTLRQAKGDANITGLVLSLKDFAGADQASLEYIGKALREFRDSSKPIYA-VGDSYSQ 154 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 A Y ++ +N I V G+ Y K LDKL V+ + K+ PF Sbjct: 155 AQYYLASYANKIYLTPQGAVDLHGIATNNLYYKTLLDKLKVNSHIFRVGTYKSAVEPFLR 214 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--------WTGAEAK 219 ++ A + V + ++ V+ +R + + + T A Sbjct: 215 DNMSDDAREADSRWVGQLWQHYLTTVATNRQTTPAQLFPGAQAMLDDLRAVEGNTAQFAL 274 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 +D V + + +L Sbjct: 275 NNKWVDEVASRSAIDAALTK 294 >gi|288801210|ref|ZP_06406665.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 299 str. F0039] gi|288331821|gb|EFC70304.1| signal peptide peptidase SppA, 67K type [Prevotella sp. oral taxon 299 str. F0039] Length = 590 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 18/262 (6%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISRDDS 65 + + + ++ +A +G I SQ + +E++ +DD+ Sbjct: 285 VGISDMQQIENSTSDNNEIAVYYAQGTIVQNQAVGLFAQGGDIVSQTVCTDLEKLMKDDN 344 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+++ ++S GG AYA E I+ + ++K +KPV+ + + AAS Y +SC +N I+A Sbjct: 345 IKAVVIRINSGGGDAYASEQIWHQVTELKAKKPVVISMGDYAASGAYYLSCNANWIIAQP 404 Query: 126 TSLVGSIGVLFQYPYVKPFLD-KLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVD 183 T+L GSIG+ P ++ KLGV ++++ + + F +N V+ + + Sbjct: 405 TTLTGSIGIFGVIPDFSGLVNGKLGVKFDEIQTNKNSSFGNVFARPLNQDEVKYLTAKIQ 464 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 Y F + V+E R++ ++ ++ G +W G++A + L+D +GG E L Sbjct: 465 RGYSLFRKRVAEGRHLTIEQVEKIAQGHVWLGSDALNIHLVDQLGGLNEAIAKAAQLAKL 524 Query: 244 QSIRKIKDWNPPKNYWFCDLKN 265 + + P + W K Sbjct: 525 TNYT--TNNYPAQASWLDMFKE 544 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 94/244 (38%), Gaps = 29/244 (11%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QELIER 56 +++ + S SS + + V + + G IE+ +L+ Sbjct: 26 LMISFVGMVASSSSKMAIKNNSVLVLNLSGTIEEQTKENILGQITGNTVNSLGLDQLLSA 85 Query: 57 IERISRDDSATALIVS---LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 I++ +D+ + + LSS G A + + A+ +N I + Y Sbjct: 86 IQKAKSNDNIKGIYIEAGLLSS--GYAT-LQEVRNALLDFRNSGKWIIAYGDEYTQGAYY 142 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VN 171 ++ +N ++ ++ G+ Q ++K + K+GV +K K+ ++E ++ Sbjct: 143 VASVANKVLINPEGMLDWHGLAAQPMFIKDAVAKVGVRYNVIKVGKYKSATEMYTEDQMS 202 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVGLIDVVGG 229 + + ++ ++ + V++SR + D +D I + L+D + Sbjct: 203 DANKEQVGRFLNGTWQVLCQSVAKSRGVEVDSLNAYADRLIALEAATQLLSYKLVDGLVY 262 Query: 230 QEEV 233 +++ Sbjct: 263 TDQI 266 >gi|332529429|ref|ZP_08405388.1| peptidase S49 [Hylemonella gracilis ATCC 19624] gi|332041075|gb|EGI77442.1| peptidase S49 [Hylemonella gracilis ATCC 19624] Length = 382 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 9/276 (3%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSP--HVARIAIRGQIEDSQE-----LIERIER 59 KI R + L L L + SH +P H A ++IRG+I E ++ Sbjct: 101 KIANRMIFLFLFLLMLWLLFRPSHPGTATPQKHTAVVSIRGEISSDSEAGADLVLAAARE 160 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCA 117 + A A+++ + SPGGS I I ++K +KPV V E ASA Y I+ + Sbjct: 161 AFENTDAQAVVLLIDSPGGSPVQAGIINDEILRLKALHKKPVYAVVEESCASAAYYIAVS 220 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL +DKLGV + + + K PFS + Sbjct: 221 ADRIFVDKASIVGSIGVLMDGFGFTGLMDKLGVERRLMTAGENKGFLDPFSPQTVSQREH 280 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q +++ + F+ +V R +T G WTG +A ++GL D +G V + + Sbjct: 281 AQAMLNQIHQQFIAVVKAGRGKRLQETPDTFSGLFWTGEQAVQMGLADQLGSLGYVAREV 340 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + + F L+ Sbjct: 341 VQAEALVDYTRTPNVAERLAKRFGAAVGAGAVRALQ 376 >gi|145631778|ref|ZP_01787538.1| protease IV [Haemophilus influenzae R3021] gi|144982568|gb|EDJ90118.1| protease IV [Haemophilus influenzae R3021] Length = 289 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 14/245 (5%) Query: 41 IAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + G I D + + + + D+S A+I+ ++SPGGSA+A E I + + Sbjct: 1 MNVEGTIIDGESDEENAGGDTIARILRKAHDDNSVKAVILRVNSPGGSAFASEIIRQETE 60 Query: 92 KVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++ KPVI + MAAS GY IS ++ I+A ++ GSIG+ +P + + K+GV Sbjct: 61 NLQKIGKPVIVSMGAMAASGGYWISSTADYIIADANTITGSIGIFTMFPTFENSIKKIGV 120 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + V ++ + S FS + + Q ++ Y F+ +VS+ R + + L+ G Sbjct: 121 NADGVSTTELAKT-SAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVDKLAQG 179 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 ++W G++A + GL+D +G E L + ++D++ WF D IS+ Sbjct: 180 QVWLGSDAFQNGLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNVSLIST 236 Query: 271 LLEDT 275 LL DT Sbjct: 237 LLRDT 241 >gi|262277441|ref|ZP_06055234.1| peptidase family S49 [alpha proteobacterium HIMB114] gi|262224544|gb|EEY75003.1| peptidase family S49 [alpha proteobacterium HIMB114] Length = 268 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 19/265 (7%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 P VA I + G I + + I++ +A+ +S++SPGGS Sbjct: 4 SKKPQVAHIRLSGVIGNVGRFQQGMSLSSHEKIIKKAFNQKKLSAVAISINSPGGSPVQS 63 Query: 84 EAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I+ I+++ K V IT ++AAS GY+++CA + I A +S+VGSIGV++ + Sbjct: 64 HLIYSLIRRLAEEKKVKVITFAEDVAASGGYMLACAGDEIYANPSSIVGSIGVIYSSFGL 123 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NI 199 K + K+G+ + + K+ PF + P+ ++ ++ + + F+ LV SR I Sbjct: 124 KELIKKIGIERRVHTAGKNKSTLDPFMDEKPEDIERLKKIQLDLHDQFISLVKNSRKDKI 183 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 DK L G W+G ++K++GL+D +G E+V Q + V IK ++ P++ W Sbjct: 184 SSDKDDQLFTGEFWSGIQSKELGLVDGLGNMEDVIQEKFGKKV-----VIKKFDKPES-W 237 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKV 284 + IS+ + ++ + Sbjct: 238 LKRKLSSQISNQFSNVADEIETRSL 262 >gi|258544038|ref|ZP_05704272.1| 36K family signal peptide peptidase SppA [Cardiobacterium hominis ATCC 15826] gi|258520666|gb|EEV89525.1| 36K family signal peptide peptidase SppA [Cardiobacterium hominis ATCC 15826] Length = 319 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 124/251 (49%), Gaps = 14/251 (5%) Query: 28 SSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 S H+A ++++G I ++ ++I +E+ ++ A A+I+ ++S GGS Sbjct: 55 SEGASYRGKHLAVVSVQGMIASDMEANADDIISGLEKAFKNPMAEAVILDINSGGGSPVQ 114 Query: 83 GEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A++RA++++K+ + PV + ++ AS Y I+ +++ I A S+VGSIGV+ Sbjct: 115 SGAVYRAVKRLKSERSDLPVYAVIADVGASGAYYIAASADEIYADPASIVGSIGVISYGL 174 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L KLG+ + + K + ++P V MQ ++D+ + F++ V + R Sbjct: 175 GYRDLLGKLGLDARVFTAGEHKNFLAGDKPLDPNEVAHMQALLDNMHAQFIKAVRDGRGE 234 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 +T + G WTG +A+ +GLID +G + + + Y ++ P + Sbjct: 235 RLKETPEMFSGLFWTGEQAQPLGLIDALGDKNTLRNAKY------KDLDFVEYKPDRTPL 288 Query: 260 FCDLKNLSISS 270 L+++ + Sbjct: 289 EKLLRDMGTEA 299 >gi|325133299|gb|EGC55965.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M13399] Length = 328 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 126/257 (49%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A+KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADAQKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|300776240|ref|ZP_07086098.1| signal peptide peptidase SppA [Chryseobacterium gleum ATCC 35910] gi|300501750|gb|EFK32890.1| signal peptide peptidase SppA [Chryseobacterium gleum ATCC 35910] Length = 585 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 10/260 (3%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVS 72 Y S + + + VA + G I + S++ ++ I+++ DD A++ Sbjct: 287 LASYISSYADDDKSGEKVAVLYASGSINNGDEYNDIHSEKYVKYIKKLQEDDKVKAVVFR 346 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGGSA A + I +Q++K +KP+I + AAS GY ++ A++ I + +L GSI Sbjct: 347 INSPGGSANASDEILFELQQLKKKKPLIVSFGDYAASGGYYVAMAADKIYSEPNTLTGSI 406 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV PY K K G+ V ++ S + V P V MM V+ +Y FV Sbjct: 407 GVFGVMPYYKDIAAKNGIRADIVATNANSMYYSGLNGVTPYGVNMMTRSVEGTYKRFVHF 466 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS--IRKIK 250 V+++R +++ + GR+W+G AK++GL+D +G + + +S + Sbjct: 467 VTQNRKKTFEQIDNVGGGRVWSGVRAKEIGLVDELGTLTDAVKFAAQKAGLKSYQVDAFP 526 Query: 251 DWNPPKNYWFCDLKNLSISS 270 P F DL +S+ Sbjct: 527 KRMSPFEQIFKDLNEEDVSA 546 Score = 90.2 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 105/289 (36%), Gaps = 32/289 (11%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------------Q 51 + + ++ L V V I ++ I DS Sbjct: 22 FFIFFIMMLVFSAMGNDKSVAVKKNSVLTINLKTNIIDSPTEEEMGLFGIGAQNKSILIY 81 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 + +E I + DD+ + + + + AI+ K K V + ++ SA Sbjct: 82 DAVEAINKAKTDDNIKGISIEADDLNAGLTQIDDLRNAIEDFKKSGKFVYAYGNGVSQSA 141 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--S 168 Y + ++ ++ G+ + + K F DK G+ I+ ++ K+ PF + Sbjct: 142 -YYLGSVADKYYLHPAGMIELKGLSTEVTFFKDFADKYGIGIEVIRHGKFKSAVEPFLRN 200 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKKVGLID 225 +++P+ + + +++ + ++ SR I + ++D G I ++ + L D Sbjct: 201 DISPENKEQLSTLLNDLWKNTSNKMAASRKIDTAQFRTITDSLYGMI--PEQSLQYKLAD 258 Query: 226 VVGG---QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + E + ++ + + + KI + +Y D ++ L Sbjct: 259 KLMQKSEYENLIRAKLNVKEKEKLNKISLASYISSYADDDKSGEKVAVL 307 >gi|319408201|emb|CBI81854.1| protease [Bartonella schoenbuchensis R1] Length = 283 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 18/268 (6%) Query: 38 VARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I DS + R +++ D A A+++ ++SPGGS IF Sbjct: 20 IPVVRLHGAIMDSNSFMARTLSLGRCAPLLDKAFADKKAPAVVLIINSPGGSPVQSRLIF 79 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + N K V+ + ++AAS GY+I+CA + I A +S+VGSIGV+ L Sbjct: 80 QRIRDLANEKNKQVLVFIEDVAASGGYMIACAGDEIFADPSSVVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF V+ ++ + + F+ LV E R Sbjct: 140 KKIGVERRVYTAGKNKVVLDPFQPEKKMGVEHLKSLQLEVHQTFIDLVKERRASKLSDDS 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + G W+G + ++GL+D +G V + + G D +R I +P K+++ + + Sbjct: 200 DIFTGMFWSGKKGVELGLVDQLGDVRSVIKDRF--GYDTKLRLI---SPSKSFFGPKMPS 254 Query: 266 LSISSLLEDTIPLM-KQTKVQGLWAVWN 292 + ++ + + + LW + Sbjct: 255 GVTADMVYTAVDSAWMAAEERALWQRYG 282 >gi|213962885|ref|ZP_03391145.1| signal peptide peptidase SppA, 67K type [Capnocytophaga sputigena Capno] gi|213954542|gb|EEB65864.1| signal peptide peptidase SppA, 67K type [Capnocytophaga sputigena Capno] Length = 590 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 9/226 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I G+I + +I + + + A+++ ++SPGG A A Sbjct: 305 KTKDKIAVIYADGEIMQGEGRAEVVGNETIIRALRKAADKKEVKAIVLRINSPGGDALAS 364 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E + R I+ K +K V + AAS GY I+C +N I A E ++ GSIGV P V Sbjct: 365 ELMHREIEITKKKKKVYVSMGNYAASGGYYIACNANRIFAEEGTITGSIGVFGVIPNVNA 424 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 G++ ++V + P S + + + + M + ++ Y F+ V++ R + Sbjct: 425 LATNWGITAETVSTHPNAQWYSLYQKPTEQFRKEMTESIEQVYTVFLDRVAQGRGKTVAQ 484 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ GR+W+G EA GL+D +G + + R I Sbjct: 485 IDSIAQGRVWSGKEALANGLVDELGSLNDAIAYAAKDNGLKEYRTI 530 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 86/209 (41%), Gaps = 17/209 (8%) Query: 51 QELIERIERISRDDSATALIVSLSSPG--GSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ I+ D + + S G G + + +A+ K + ++ + Sbjct: 84 NTTLKAIQNAKIDKRIKGIYLK--STGNIGGLAFAQELRKALIDFKTSGKFVLAYNDEIS 141 Query: 109 SAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y + ++ I ++ +GS+ G+ + + K +K GV ++ ++ K+ Sbjct: 142 QLDYYLQSVADKIYISQ---LGSVALRGLSSEVLFFKGLQEKTGVQMEVIRHGKYKSAVE 198 Query: 166 PFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSD---GRIWTGAEAKK 220 PF + +Q ++++ + +S+SRNI +K ++ GR AK Sbjct: 199 PFLDNKMSDNNRLQISQLLNAMWGVIAADISQSRNISVEKLNEIATNVNGR--NAQLAKN 256 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GL+D + ++E + + +SI K+ Sbjct: 257 NGLVDDILYRDEFEKIICDKTGSKSIDKV 285 >gi|325205076|gb|ADZ00530.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240355] Length = 328 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S++GSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|255594924|ref|XP_002536196.1| Protease, putative [Ricinus communis] gi|223520527|gb|EEF26187.1| Protease, putative [Ricinus communis] Length = 572 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 125/254 (49%), Gaps = 11/254 (4%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLS 74 Y + + + + I G I D ++ L + + + DD A+++ + Sbjct: 262 YLTATRSLPGGHDKIGVIVASGMILDGEQRAGLVGGDTLSDLLRQARDDDDVKAVVLRVD 321 Query: 75 SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 S GGSA+A E I + + +++ KPV+ + +AAS GY IS +++ + A ++ GSIG Sbjct: 322 SEGGSAFASEIIRQQLLELQAADKPVVVSMGSVAASGGYWISASADEVWATPATITGSIG 381 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + +P V L KLGV V ++ + V+P +Q +++ Y F+ +V Sbjct: 382 IFGAFPTVDKSLAKLGVHTDGVGTTAIADAFRVDRPVSPAVAGAIQSGIEAGYQRFLTVV 441 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +E R + + G++W G++A+++GL+D +GG E+ + L + ++ + Sbjct: 442 AEGREMDKAAVDKIGQGQVWAGSDAQRIGLVDHLGGLEDAVGAAAKLAELKDYQQ-ELIE 500 Query: 254 PPKNYWFCDLKNLS 267 PP++ ++ LS Sbjct: 501 PPRSPQELLIERLS 514 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 96/240 (40%), Gaps = 29/240 (12%) Query: 21 TVVYFSWSSHVEDNSPHV----ARIAIRGQIEDS--QELIERIERISRDDSATALIVSLS 74 + S + +V D + ++ + ++ +I ++ ++I+ I+ ++D L++ Sbjct: 9 AALILSPAGNVVDQASYIDPLSSLVSGDPEIRETLLADMIKAIDTAAKDARIKVLVIQTD 68 Query: 75 SPGGSAYAG----EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + YAG + + +AI + + KPVI Y ++ ++ +V V Sbjct: 69 A---MEYAGLSKLQELAQAIARFRETGKPVIATGDNFNQD-QYWLAAQADRVVMNPMGEV 124 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYH 187 G P+ K LDKL V + K+ PF +++ + Q +++ + Sbjct: 125 LLQGYGVYTPFFKQALDKLDVDFHVFRVGTYKSAVEPFLRDDMSAEVKQNHLVWLNTLWQ 184 Query: 188 WFVRLVSESRNIPYDKTLVL----------SDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + V+ R I ++ S+G G A L+D + +EE +++ Sbjct: 185 QYKDGVAARRKIGVERIDDYVNHIDRALAASNGD--AGKAAVDAKLVDTLQTREEFNRAM 242 >gi|325109492|ref|YP_004270560.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] gi|324969760|gb|ADY60538.1| signal peptide peptidase SppA, 36K type [Planctomyces brasiliensis DSM 5305] Length = 358 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 126/270 (46%), Gaps = 24/270 (8%) Query: 10 TRYVMLSLVTLTVVYFS------------------WSSHVEDNSPHVARIAIRGQIED-- 49 TR + ++ + ++ F+ + S + + +A I++ I Sbjct: 43 TRLLTIAFIFSLLLNFALFSAYGTYLGEFDGAQERYHSGSKTATDKLALISVEATIMPPF 102 Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 ++ +I+ I + + DD +V + SPGG I+ ++K+ +KPV ++ +AAS Sbjct: 103 TERIIDHIRKATEDDDVKGAVVVVDSPGGLVADSHQIYHELKKLAEKKPVFVQMKRIAAS 162 Query: 110 AGYLISCAS---NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 GY ++ + IVA T+ GSIGV+ + + ++GV + + + K S Sbjct: 163 GGYYVAMGAGKSGKIVAEPTTWTGSIGVIIPHYDLTELAGQIGVKSEPLTTGEFKDSLSS 222 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F ++ + + + ++D +Y F+ ++ + R ++ + ++ GRI+T +A GL+D Sbjct: 223 FKPLSDRERDVWKGILDDAYQRFLSVIEQGRPDMSRQQIEDVATGRIFTSQQALAEGLVD 282 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 +G +E L +S R I+ +PP Sbjct: 283 EIGFLDETIAGLAEQLNLKSYRVIEYQHPP 312 >gi|257882224|ref|ZP_05661877.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257885419|ref|ZP_05665072.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|293568402|ref|ZP_06679723.1| signal peptide peptidase [Enterococcus faecium E1071] gi|294623115|ref|ZP_06702001.1| signal peptide peptidase [Enterococcus faecium U0317] gi|14548273|sp|Q9X480|SPPA_ENTFC RecName: Full=Putative signal peptide peptidase sppA gi|4760912|gb|AAD29142.1|AF099088_11 protease IV homolog [Enterococcus faecium] gi|257817882|gb|EEV45210.1| protease/peptidase [Enterococcus faecium 1,231,502] gi|257821275|gb|EEV48405.1| protease/peptidase [Enterococcus faecium 1,231,501] gi|291588923|gb|EFF20750.1| signal peptide peptidase [Enterococcus faecium E1071] gi|291597484|gb|EFF28649.1| signal peptide peptidase [Enterococcus faecium U0317] Length = 344 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 14/246 (5%) Query: 34 NSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSA 80 ++ + ++++ G I D+ Q + ++++I D + +++ ++SPGG Sbjct: 61 SNKKIVKLSVNGVIADTGESNLFSREQYNHQNFLTQLKKIQEDKAVKGVLLEVNSPGGGI 120 Query: 81 YAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 Y I + + K+K P+ T AAS GY IS S+ I A E + GSIGV+ Sbjct: 121 YESAEIAKEMAKIKKLDIPIYTAFKNTAASGGYYISAGSDKIFATEETTTGSIGVIISGL 180 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L+KLGV+ + KS +K SP + + + +++Q+ V S+Y FV +V++ RN+ Sbjct: 181 NYSGLLEKLGVTDATYKSGALKDMMSPQHKPSEEENKVIQEFVMSAYDRFVNVVAKGRNM 240 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + L+DGRI+ G +A + GL+D +G E+ SL I+ N + Sbjct: 241 DTNAVKELADGRIYDGNQAVENGLVDQIGYSEDALDSLKKEKKLTDATVIEYKNDTTGFA 300 Query: 260 FCDLKN 265 L N Sbjct: 301 SSWLGN 306 >gi|332971034|gb|EGK10005.1| signal peptide peptidase SppA [Kingella kingae ATCC 23330] Length = 336 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 27/270 (10%) Query: 34 NSPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + PH A + + G+I S++ L E ++ R+ +A A+I+ +SPGGS F Sbjct: 82 HQPHTAVVKLTGEIGGSEQRNQVDILREGMQAAYRNPNAKAIIIHANSPGGSPVVSNIAF 141 Query: 88 RAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +++++ PV +M AS Y I+ A++ I A +SL+GSIGV+ Sbjct: 142 AEVRRMRAEHKNIPVYVVAQDMCASGCYYIAAAADKIFADPSSLMGSIGVIGSSFDATGL 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYD 202 ++KLG+ + + K PF+ +P+ + Q ++D + F++ V + R + Sbjct: 202 MEKLGIQRRVRIAGNNKGMGDPFTAESPEQQAIWQQMLDQIHGEFIQAVKQGRGNRLQEK 261 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + L GRI+TG EAKK GL+D +G V + + + D+ P ++ Sbjct: 262 QYPDLFSGRIFTGIEAKKAGLVDDLGNVYSVARDVV------KAPNLVDYTPEQD----- 310 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWA-VW 291 ++ LL + Q + Q + VW Sbjct: 311 ----DLARLLSRHLGAQVQNQAQEWLSKVW 336 >gi|261378542|ref|ZP_05983115.1| signal peptide peptidase SppA [Neisseria cinerea ATCC 14685] gi|269145092|gb|EEZ71510.1| signal peptide peptidase SppA [Neisseria cinerea ATCC 14685] Length = 328 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 13/283 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHV---EDNSPHVARIAIRGQIEDS-----QELIE 55 + K I L L+ L F E N+PH A + + G+I + ++L + Sbjct: 43 MWKNIWRAVGTLILIALLAGIFRKDETALRLEGNTPHTAVVNLYGEIGNGVEDQVKKLKD 102 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGY 112 +E ++ A A+I+ +SPGGS F I+++K + P V +M AS Y Sbjct: 103 GMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPNIPVYLVAEDMCASGCY 162 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A +S+VGSIGV+ ++K+GV + + K PFS P Sbjct: 163 YIAAAADKIYADPSSIVGSIGVIGSSFDATELMEKIGVKRRVKIAGSNKGMGDPFSPETP 222 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ ++++ + F++ V R + + + + GR++TGA+A+KVGLID +G Sbjct: 223 EQSKIWEEMLTGIHGEFIKAVKAGRGSRLKFQQYPDVFSGRVYTGADAQKVGLIDGLGNV 282 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 V +++ + D+ + +L+ Sbjct: 283 YSVARNVVKAPDLVDYTRQDDFGTLLGRRLGAELKAGVREVLQ 325 >gi|223041110|ref|ZP_03611365.1| signal peptide peptidase SppA, 36K type [Campylobacter rectus RM3267] gi|222877604|gb|EEF12730.1| signal peptide peptidase SppA, 36K type [Campylobacter rectus RM3267] Length = 288 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 4/278 (1%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 V K I T + + + L + F N P++A+I + G I D+ + +E I+ S+D Sbjct: 14 VFKFINTYFKTMIFLLLVFLIFFSDKEGGVNPPNLAQINLTGAIIDAHKALEEIDSASKD 73 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 ++ +++ + SPGG+ ++ A++ ++ +KPVI AS Y +++ I+A Sbjct: 74 EAIKGVLLYIDSPGGALAPSVELYTAVKNLRAKKPVIAYAGGSMASGSYYAGVSADKILA 133 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +GSIGV+ Q + K+GVS + VK+ K + + + +Q +V+ Sbjct: 134 NPGAFIGSIGVIMQGADLSELAAKIGVSQQIVKAGEYKEAGTFLRPWSEVEKRQLQSLVN 193 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GV 242 +SY FV V+ +R + K ++ R++ +A K+GLID V + L + GV Sbjct: 194 ASYAMFVSDVATARKLDVTKRDEWANARVFLARDAAKLGLIDEVSDYFSAKRELERMSGV 253 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + K K P + + S SL+ +P ++ Sbjct: 254 ANPVWKQK---PAFEKFLDKVAGESAKSLVNLFMPTVR 288 >gi|154174848|ref|YP_001408779.1| signal peptide peptidase SppA, 36K type [Campylobacter curvus 525.92] gi|112802242|gb|EAT99586.1| signal peptide peptidase SppA, 36K type [Campylobacter curvus 525.92] Length = 287 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 138/271 (50%), Gaps = 6/271 (2%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 +LK I T + L + + ++ F+ S ++ P++A+I I+G + D+ E++ ++E + D Sbjct: 14 ILKFINTNFKALVFLLILILLFAPSGDIK--QPNLAQIDIKGALFDTDEILNKLEELRND 71 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + +++ + SPGG+ I ++++K K V+ AS Y ++ I+A Sbjct: 72 QNIKGVLLYIDSPGGALSPSVEIATQVKRLKESKKVLAYAGGSMASGSYYAGVNADKILA 131 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 S +GSIGV+ Q P + K+GVS + VK+ +K + + + + +Q++VD Sbjct: 132 NPGSFIGSIGVIMQAPNIAELAHKIGVSEQVVKAGELKEAGTFTRQWSKEERASLQNLVD 191 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GV 242 +Y F + V+++RN+ DK ++ R++ +A K+GLID V G + L A+ GV Sbjct: 192 GAYELFTKDVAQARNLSLDKKDEWANARVFLADDALKMGLIDGVCGYFDAKSELEAMSGV 251 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 D+ + P + I+SL Sbjct: 252 DEPVW---QEKPQIEKLMEKFTHQGINSLFN 279 >gi|34557816|ref|NP_907631.1| protease IV (PspA) [Wolinella succinogenes DSM 1740] gi|34483534|emb|CAE10531.1| PROTEASE IV (PSPA) [Wolinella succinogenes] Length = 290 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 6/278 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +EFV + K +L LV + ++ + N ++A I+++G I + +E +ERI Sbjct: 16 LEFVTRYFKA---LLFLVIVVWIFGANEGSSAINETNLAEISLKGAILNPDSFLEELERI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 +++ + SPGG+ I I+++ + PV+ + AS GY S Sbjct: 73 ESLPRLAGVLLVVDSPGGAIAPSVEISEEIKRLSAKVPVVVYAQGVMASGGYYAGIWSKR 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A + SL+GSIGV+F V K+G+ +++K+ K + N ++ Sbjct: 133 IIANKGSLIGSIGVIFNGADVSELASKIGIKTQTIKAGKYKEAGTFMRPWNEDEEGEIKR 192 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V Y FV V+E+R + + + + ++GR+++ EA ++GLID +G + + ++L L Sbjct: 193 LVRKQYEMFVLDVAEARGLDQEVSPLYAEGRVFSATEALELGLIDQIGIKSDAKRALEEL 252 Query: 241 -GVDQSIRKIKD-WNPPKNYWFCDLKNLSISSLLEDTI 276 GV + + K+ W W L +S+LL I Sbjct: 253 SGVKEPLWLQKEPWEKYMERWMSQ-ATLQLSTLLASGI 289 >gi|325135353|gb|EGC57974.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M0579] gi|325203104|gb|ADY98558.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240149] gi|325208973|gb|ADZ04425.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis NZ-05/33] Length = 328 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S++GSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|59802274|ref|YP_208986.1| putative protease [Neisseria gonorrhoeae FA 1090] gi|194099771|ref|YP_002002906.1| putative protease [Neisseria gonorrhoeae NCCP11945] gi|239999952|ref|ZP_04719876.1| putative protease [Neisseria gonorrhoeae 35/02] gi|240017669|ref|ZP_04724209.1| putative protease [Neisseria gonorrhoeae FA6140] gi|240081852|ref|ZP_04726395.1| putative protease [Neisseria gonorrhoeae FA19] gi|240114129|ref|ZP_04728619.1| putative protease [Neisseria gonorrhoeae MS11] gi|240116769|ref|ZP_04730831.1| putative protease [Neisseria gonorrhoeae PID18] gi|240118995|ref|ZP_04733057.1| putative protease [Neisseria gonorrhoeae PID1] gi|240122467|ref|ZP_04735423.1| putative protease [Neisseria gonorrhoeae PID332] gi|240126684|ref|ZP_04739570.1| putative protease [Neisseria gonorrhoeae SK-92-679] gi|240127179|ref|ZP_04739840.1| putative protease [Neisseria gonorrhoeae SK-93-1035] gi|254493478|ref|ZP_05106649.1| protease [Neisseria gonorrhoeae 1291] gi|260441561|ref|ZP_05795377.1| putative protease [Neisseria gonorrhoeae DGI2] gi|268595758|ref|ZP_06129925.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268597949|ref|ZP_06132116.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268600201|ref|ZP_06134368.1| protease [Neisseria gonorrhoeae MS11] gi|268602442|ref|ZP_06136609.1| protease [Neisseria gonorrhoeae PID18] gi|268604710|ref|ZP_06138877.1| protease [Neisseria gonorrhoeae PID1] gi|268681058|ref|ZP_06147920.1| protease [Neisseria gonorrhoeae PID332] gi|268685263|ref|ZP_06152125.1| protease [Neisseria gonorrhoeae SK-92-679] gi|268685537|ref|ZP_06152399.1| protease [Neisseria gonorrhoeae SK-93-1035] gi|291044926|ref|ZP_06570635.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293398003|ref|ZP_06642209.1| protease IV [Neisseria gonorrhoeae F62] gi|59719169|gb|AAW90574.1| putative protease [Neisseria gonorrhoeae FA 1090] gi|193935061|gb|ACF30885.1| putative protease [Neisseria gonorrhoeae NCCP11945] gi|226512518|gb|EEH61863.1| protease [Neisseria gonorrhoeae 1291] gi|268549147|gb|EEZ44565.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268551737|gb|EEZ46756.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268584332|gb|EEZ49008.1| protease [Neisseria gonorrhoeae MS11] gi|268586573|gb|EEZ51249.1| protease [Neisseria gonorrhoeae PID18] gi|268588841|gb|EEZ53517.1| protease [Neisseria gonorrhoeae PID1] gi|268621342|gb|EEZ53742.1| protease [Neisseria gonorrhoeae PID332] gi|268625547|gb|EEZ57947.1| protease [Neisseria gonorrhoeae SK-92-679] gi|268625821|gb|EEZ58221.1| protease [Neisseria gonorrhoeae SK-93-1035] gi|291011820|gb|EFE03816.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611949|gb|EFF41018.1| protease IV [Neisseria gonorrhoeae F62] gi|317165248|gb|ADV08789.1| putative protease [Neisseria gonorrhoeae TCDC-NG08107] Length = 328 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 10/272 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGKIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVVKAP 293 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 D+ F S+S L+ Sbjct: 294 DVVDYTPKDDFGRILGRRFGAELKASVSEALQ 325 >gi|319943489|ref|ZP_08017771.1| signal peptide peptidase SppA [Lautropia mirabilis ATCC 51599] gi|319743304|gb|EFV95709.1| signal peptide peptidase SppA [Lautropia mirabilis ATCC 51599] Length = 329 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 15/271 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDN----SPHVARIAIRGQI--------EDSQELI 54 +I L+++ + + + V+++ + +VA I I G I + + Sbjct: 38 RIFQWLAFLAVLAFGIQRCTSVAQVDEDQRRPASYVASINIEGVIVGGSGEEGASADRIN 97 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAG 111 + + R D A +++ ++SPGGS I +++ + KP+ + E+ AS G Sbjct: 98 KALRRAFSDPRAVGVVLRINSPGGSPVQSGMIVDEMRRQRRLHPEKPLHAVIEEVGASGG 157 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I + S+VGSIGVL Y V+ L LG+ ++ + KA P + ++ Sbjct: 158 YYIAAAADNIYVDKASIVGSIGVLLSYYGVQDTLKMLGIERRTQTAGKNKAFLDPTAPMS 217 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + Q ++D + F+ +V + R +T G WTG + ++GL D +G + Sbjct: 218 AEQKAHAQAMLDEVHRQFIDVVKQGRGQRLKETPETFSGLFWTGERSIQLGLADGLGSVD 277 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 V + + + W + + Sbjct: 278 SVARDVLNTENVVDFSEYSRWQMLARQFGAE 308 >gi|254804075|ref|YP_003082296.1| putative ClpP class peptidase [Neisseria meningitidis alpha14] gi|254667617|emb|CBA03394.1| putative ClpP class peptidase [Neisseria meningitidis alpha14] Length = 328 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 126/257 (49%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A+KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADAQKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|57241950|ref|ZP_00369890.1| protease IV (PspA) [Campylobacter upsaliensis RM3195] gi|57017142|gb|EAL53923.1| protease IV (PspA) [Campylobacter upsaliensis RM3195] Length = 293 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 7/277 (2%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 ++ I T + + L + FS SS V + ++ RI ++G+I D+ ++E+I D Sbjct: 14 IISYINTYFKTFLFLLLLIWLFSPSSSV--SIANLERIDLKGEILDTGAVLEKIINAKND 71 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + ++ + SPGG+ + AI+ +K +KPVI+ V AS YL A + I A Sbjct: 72 PNIKGVLFFIDSPGGAFAPSMELALAIKDLKAQKPVISYVAGTMASGSYLAGVAVDKIYA 131 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +GSIGV+ Q + K+GV +++K+ K + E + + +Q +++ Sbjct: 132 NPAAFIGSIGVIAQGMNISELAQKIGVKEQTIKAGTFKEAGTFTREWSEEERAYLQRLIN 191 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +SY FV V++ R + D+ +D R++ EAK +GLID + E+ + L L Sbjct: 192 NSYMLFVEFVAKERGLKVDEKEKWADARVFLANEAKNLGLIDSLSNYEQAKKELEILSKV 251 Query: 244 -----QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 + KI + N + +LL+++ Sbjct: 252 VNPVWKEADKIDQFLEKLNQQSVQFFSTLSKNLLQNS 288 >gi|56476731|ref|YP_158320.1| protease IV [Aromatoleum aromaticum EbN1] gi|56312774|emb|CAI07419.1| Protease IV [Aromatoleum aromaticum EbN1] Length = 613 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 10/209 (4%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 + HVA + +G I D + L I D+ AL++ + SPGGSA+A Sbjct: 318 EQDDHVAVLVAQGAIIDGSDTQSAVGGDSLAHLIRMAREDERVKALVLRVDSPGGSAWAS 377 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R ++ + KPV+ + +AAS GY I+ + I A+ SL GSIG+ +P + Sbjct: 378 EVIRRELELTREAGKPVVASMSSVAASGGYWIATGAEEIFASPASLTGSIGIFALFPELA 437 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDKLGV+ V + P+ P + P A + +Q ++ Y F+ V+++R++ Sbjct: 438 GALDKLGVNTDGVATGPLAGAFDPRRPLEPAAAKTIQLGIEHGYRRFLETVAKARDMSAT 497 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + ++ GR+WTG A K+GL+D +GG E Sbjct: 498 EVDTVARGRVWTGEAATKLGLVDQLGGLE 526 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 17/202 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNR-KPVITEVHEMA 107 +L+E +E D AL++ G + AI + KPV E Sbjct: 91 DLLEAVEAARDDTRIKALVIETDRLG--PTGLSKLAELRAAIVAFRQSGKPVFAR-GERF 147 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ A++ + V G+ Y LDKLGV + + KA PF Sbjct: 148 TQGQYYLASAADEVHVGPDGFVLLQGLARYISYFAEALDKLGVKMHVFRVGEYKAFSEPF 207 Query: 168 S--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----GRIWTGAEAK-- 219 + +++ + +D+++ + + SR + +K + TG +A Sbjct: 208 TRNDMSEADREASRDLLEGLWTGVREDLIASRRLAPEKLDAYVNAYPAALAATGGDAVSA 267 Query: 220 --KVGLIDVVGGQEEVWQSLYA 239 GLID ++E + L A Sbjct: 268 ARDAGLIDRASTRDEWRELLKA 289 >gi|56964512|ref|YP_176243.1| signal peptidase SppA [Bacillus clausii KSM-K16] gi|56910755|dbj|BAD65282.1| signal peptidase SppA [Bacillus clausii KSM-K16] Length = 328 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 16/237 (6%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSP 76 D S +A + + G I ++ ++ + + +I+++ SP Sbjct: 48 QEGDPSGSIALLEVNGAIINTTSDSLFSAEGYNHSNFMDLFYQTMSSPNVEGIIIAVDSP 107 Query: 77 GGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG I A+ + + KPV + MAAS GY ++ + I A +L GSIGV Sbjct: 108 GGGVLESAEIHDAVIEAQENYGKPVYISMGSMAASGGYYLAAPAEQIFAYPQTLTGSIGV 167 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + LDK+GV KS P K S + +++Q +VD Y FV +++ Sbjct: 168 IMSSLNITELLDKIGVEETVYKSGPYKDMMSGTRPPTEEEDEILQSIVDEYYDEFVEVIA 227 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIK 250 R + ++ L DGRI+TG +A + GLID +G +V ++ LG + + I+ Sbjct: 228 NGRGMDEERVRELGDGRIYTGRQALEAGLIDELGSINDVIAAMQRDLGSNYQVIAIE 284 >gi|309379804|emb|CBX21580.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 328 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 126/272 (46%), Gaps = 10/272 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFQKDEGALQLTGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A+KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADAQKVGLVDGLGNIYSVARDVVKAP 293 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + D+ + L+ Sbjct: 294 DLVDYTRQDDFGTLLGRRLGAELKAGVREALQ 325 >gi|325141318|gb|EGC63806.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis 961-5945] gi|325199204|gb|ADY94660.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis G2136] Length = 328 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DSSSIVGSIGVIGSSFDATELMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|118616594|ref|YP_904926.1| protease IV, Ssp [Mycobacterium ulcerans Agy99] gi|118568704|gb|ABL03455.1| protease iv, Ssp [Mycobacterium ulcerans Agy99] Length = 600 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 17/261 (6%) Query: 34 NSPHVARIAIRGQIEDS----------------QELIERIERISRDDSATALIVSLSSPG 77 P +A +++ G I + + + + DD +A+++ + SPG Sbjct: 305 GKPTIAVVSVEGPIVNGRGGPQGLPLGPSSAGGDTIASALGETAADDEVSAIVLRVDSPG 364 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I+R +Q+ ++R K V+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 365 GSVTASETIWREVQRARDRGKSVVASMGSIAASGGYYVSMGADAIVANPGTITGSIGVIT 424 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 V+ D+LGV ++++++ S + + + D Y F V+ Sbjct: 425 GKLVVRDLKDRLGVGSETLRTNANADAWSIDAPFTDEQRARREAEADMFYTDFAERVARG 484 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RN+ + ++ GR+WTGA+A + GL+D +GG L +++ P Sbjct: 485 RNLRTEDVDAVARGRVWTGADALERGLVDELGGFRTAVPRAKVLAGLDEDTEVRPVGYPG 544 Query: 257 NYWFCDLKNLSISSLLEDTIP 277 + L S + ++P Sbjct: 545 SLLLDLLWPRGSSRPVAASVP 565 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 80/211 (37%), Gaps = 2/211 (0%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV 99 I+ G+ ++ + + R + D LI + P A +A+ AI KP Sbjct: 58 IISGGGRPMALRDAVAALHRGAEDPRVGGLIARVQLPPAPIGAVQALREAIAAFSAVKPS 117 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + Y ++ A I + G IG ++ LDK+G+ + V Sbjct: 118 VAWAETYPGTLSYYLATAFREIWMQPSGEAGLIGFASNAMFLCDALDKVGIEAQFVARGE 177 Query: 160 MKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K+ F+E + + +++S V++SR I L+D E Sbjct: 178 YKSAADLFTEDGYTDANREAVTRMLESLQDQAWHAVAQSRQIDAGVLDELADKAPLLRDE 237 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 A GLID +G ++E + + L + + Sbjct: 238 ALSSGLIDRIGFRDEAYARIAELARVEGVSP 268 >gi|331005266|ref|ZP_08328658.1| putative peptidase [gamma proteobacterium IMCC1989] gi|330420943|gb|EGG95217.1| putative peptidase [gamma proteobacterium IMCC1989] Length = 328 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 16/275 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K+ + + +V + V S +H HV + + G I ++ +L + Sbjct: 41 IFFKLFFC-IYIVVVFVGVARQSQVTHYASTEEHVGIVYLDGAIAADQTANANDLASALR 99 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN---RKPVITEVHEMAASAGYLIS 115 + S+ A+I++++SPGGS ++ I++++ K + + ++ AS GY I+ Sbjct: 100 AAFANTSSKAVILAINSPGGSPVQSGYVYDEIKRLRAIHTDKKLYAVISDLGASGGYYIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A ++SLVGSIGV ++KLGV +S S K PF+ Sbjct: 160 AAADEIYADKSSLVGSIGVTASSFGFVGLMEKLGVERRSYTSGEHKGFLDPFAPQRKDET 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + V+DS++ F+R V E R + G IW G +A + GLID +G V Sbjct: 220 IFWESVLDSTHEQFIRAVEEGRGDRLVAGDEDIYSGLIWNGEQALEKGLIDGLGSAGYVA 279 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + S+ ++ D+ + KN ++ Sbjct: 280 REVV------SVEQVVDYTVRPTPFEEFSKNFGVA 308 >gi|198283845|ref|YP_002220166.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665192|ref|YP_002426483.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248366|gb|ACH83959.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517405|gb|ACK77991.1| signal peptide peptidase SppA, 67K type [Acidithiobacillus ferrooxidans ATCC 23270] Length = 605 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 11/247 (4%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQ----------IEDSQELIERIERISRDDSATALIVS 72 Y + + S +A + I G + +Q I++++R+ + S A+++ Sbjct: 304 AYLAATKPSTTASAKIAVVPIDGMLVTGDAPLPGVVAAQATIKQLDRVGHEASVKAVVLQ 363 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGG A +AI AI +++ KPVI + + AS Y +S A++ I A T+L Sbjct: 364 VNSPGGDVNAAQAIRAAILRIRKAHKPVIVSMGTLGASGAYWLSTAADRIYAHPTTLTAD 423 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV +P L KLG+ + ++ SPFS + + +Q +VD++Y FV Sbjct: 424 IGVFALFPNYAGLLKKLGIHYSGIATTRNANAMSPFSPLGKNVQKALQAMVDNTYADFVN 483 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 LV+ +R+IP +K + GR W+G +A +GL++ +GG + Q L + Sbjct: 484 LVANARHIPTNKVEHDAQGRAWSGLDAYHLGLVNALGGMPQAIQEAAKLAKLSKGKYQVQ 543 Query: 252 WNPPKNY 258 + PP Sbjct: 544 YLPPPTP 550 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 22/216 (10%) Query: 51 QELIERIERISRDDSATALIVSLS-S--PGGSAYAGEAIFRAIQKVKN-RKPVITEVHEM 106 +++++ I+R S D ++ L+ S GGS + + RA+Q+ + KP+ + Sbjct: 89 RQMVQAIDRASTDARI--HLLELNLSDFGGGSITQLDTVARALQRFRAHGKPIYAYAPDY 146 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + A YL++ +N I V G + Y K LDKLG+++ S + K+ P Sbjct: 147 SQDA-YLLAAQANHIYMPRLGTVLITGFSTRGLYFKGLLDKLGITVYSFRQGKYKSAMEP 205 Query: 167 --FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----------GRIWT 214 + ++ A + + +++ V++ R + +D G Sbjct: 206 LTLTHMSKSAQVENAAWLKVWWDTYLQDVAKGRGLKATLVSRYADQLPELLENYQGN--A 263 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 A K GLI +G E ++ A + Q + IK Sbjct: 264 AELALKQGLITRIGD-EHAFRQAVAAALKQPPKHIK 298 >gi|257466515|ref|ZP_05630826.1| protease IV [Fusobacterium gonidiaformans ATCC 25563] gi|315917670|ref|ZP_07913910.1| protease IV [Fusobacterium gonidiaformans ATCC 25563] gi|313691545|gb|EFS28380.1| protease IV [Fusobacterium gonidiaformans ATCC 25563] Length = 564 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 4/266 (1%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 YFS ++A + + G IED ++ ++ I +D + +I+ ++SPGGSA Sbjct: 290 YFSLVKMKTRPKNYLALLNLEGTIEDETLFLDEVKAIQKDQNVKGVILRINSPGGSALVA 349 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++ A++K++ + PV + AAS GY ++ A I A+ S+ GSIGV+ P Sbjct: 350 DTMYHAVKKLREKIPVYVSISGTAASGGYYVAAAGEKIFASPLSVTGSIGVVSMIPNFSN 409 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K V +S+ S ++ + +++ Y F+ +VS +RNI D Sbjct: 410 LEKKANVVTESISKGKYADLYSYLQPLSEENYNRIREGNLGVYQDFLEVVSSNRNIKKDF 469 Query: 204 TLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 L+ GR+W G EAK+ GLID +GG E YAL D+ + + KN F Sbjct: 470 LDKNLAQGRVWLGIEAKENGLIDELGGLEATI---YALEQDKKLGTLPILQVSKNDVFGQ 526 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLW 288 L + ++ LW Sbjct: 527 YLGKYRKFLSVLPSSMQQKVPKDRLW 552 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 120/320 (37%), Gaps = 50/320 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------ 50 F +K + + ++ +V + Y S + E + + + Sbjct: 22 FFIKLVLSLILLAIVVGTFISYISKENTTEIKQGSYVLLRASSPLSEHIPIPDPLSLQEK 81 Query: 51 ----QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKV-KNRKPVITEV 103 E++ ++ I +D +++ S + E I +QK+ K K VIT + Sbjct: 82 HMTFFEVLYALDSIRQDQRIQGVLLDADFLSW--NKAQLEEIGNKLQKLEKEGKKVITTL 139 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGS-IGVL-FQYPYVKPFLDKLGVSIKSVKSSPMK 161 E+ + Y ++ + IV S I ++ Y K LD+ GVSI + K Sbjct: 140 QEVNRN-NYFLASYTKEIVMTPIHAASSNISPYHYEELYWKNLLDRFGVSINVIPIGDYK 198 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S+++ + + M ++D SY + + ++ +R + + + +G + G Sbjct: 199 SYMENYSHSQMSKEFRENMTRILDKSYDYSIEAIANNRKLEKNTLKAWIENGE-FMGTSF 257 Query: 217 -EAKKVGLI----------DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + GLI D +G ++ + + + +K PKNY Sbjct: 258 PTLFEKGLITKGEYPNRIRDEIG--DDKI-----ISIQEYFSLVKMKTRPKNYLALLNLE 310 Query: 266 LSI--SSLLEDTIPLMKQTK 283 +I +L D + +++ + Sbjct: 311 GTIEDETLFLDEVKAIQKDQ 330 >gi|14591350|ref|NP_143428.1| protease IV [Pyrococcus horikoshii OT3] gi|3257998|dbj|BAA30681.1| 334aa long hypothetical protease IV [Pyrococcus horikoshii OT3] Length = 334 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 3/229 (1%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 F S +V + VA + I G I+D + +IE I RI +D+ ++V + SPGG Sbjct: 77 FIASRNVTYTNVTVAILPIFGPIDDESALNVIEVIRRIRENDTIKGVLVWIESPGGFVGP 136 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ ++K+ KPVI V A S GY I+CA+ IVA + VGSIGV++ + + Sbjct: 137 VREIYIELKKLDYIKPVIAYVSGYAYSGGYYIACAAKEIVANPLADVGSIGVIYVHFNAE 196 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + + G+ ++ K+ P K + + ++ P+ +++Q + + ++ F+++VSE RN+ + Sbjct: 197 KYYEMNGIEVEVFKTGPYKDMGADWRKLTPEERKIVQTQIQTYFNDFLQVVSEGRNMTVE 256 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 + GR W + L+D +G + + L L + I Sbjct: 257 DVKKFATGRTWFAKD-VNGTLVDKLGDLDLALKELLKLIGAKKANVIVY 304 >gi|121635773|ref|YP_976018.1| putative protease [Neisseria meningitidis FAM18] gi|120867479|emb|CAM11256.1| putative protease [Neisseria meningitidis FAM18] gi|325131359|gb|EGC54070.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M6190] gi|325137388|gb|EGC59976.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis ES14902] Length = 328 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DSSSIVGSIGVIGSSFDATELMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|183219875|ref|YP_001837871.1| peptidase PfaP [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910003|ref|YP_001961558.1| periplasmic serine protease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774679|gb|ABZ92980.1| Periplasmic serine protease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778297|gb|ABZ96595.1| Peptidase PfaP (Periplasmic flagella-associated protein; PF-associated peptidase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 321 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 125/256 (48%), Gaps = 11/256 (4%) Query: 40 RIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + I G+I + ++ ++ + D + +++ ++SPGG+ A + IF + Sbjct: 53 VLPIVGEIHSGESTFDSTGADTVLRQLRELDEDTNVKGILIEINSPGGTVAASQEIFNEL 112 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++ K ++ + ++AAS GY I+ AS+ I A ++ GSIGV+ P VK LD+ GV Sbjct: 113 LHLRKSKKIVVSMKDVAASGGYYIAAASDYIFAENGTITGSIGVISFAPNVKGLLDRYGV 172 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ K+ K SPF + + M+ + +Y FV V++ RN L++G Sbjct: 173 GVRTYKAGKYKDMYSPFRDSTNEEDDMIGKQLQDTYRKFVEDVAKGRNKTVKSIEELAEG 232 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI--KDWNPPKNYWFCDLKNLSI 268 +I++G +A + L+D +GG+ E + L L + + + ++++P + Sbjct: 233 KIYSGEDAFRNKLVDDIGGRREAHKKLSELCQYEGLIPLFEQEYSPFERMIRSLGVKFLG 292 Query: 269 SSLLEDTIPLMKQTKV 284 I + Q++V Sbjct: 293 EGSQTSKIRALLQSQV 308 >gi|90420561|ref|ZP_01228468.1| putative peptidase, S49 family [Aurantimonas manganoxydans SI85-9A1] gi|90335289|gb|EAS49042.1| putative peptidase, S49 family [Aurantimonas manganoxydans SI85-9A1] Length = 325 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 93/277 (33%), Positives = 152/277 (54%), Gaps = 11/277 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + +AR++I G I Q+L++ ++R+ +D+ A+++ + SPGG+ GE+I+ Sbjct: 41 ADRMATSKDQIARVSIEGMILKDQKLLDLLDRLKDEDAVKAVVLRIDSPGGTTVGGESIY 100 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A++ + KPV EV +AASAGY+I+ ++ IVA TS+VGSIGV+FQY LD Sbjct: 101 EAVRAIAEVKPVAAEVGTLAASAGYMIASGADHIVARRTSIVGSIGVIFQYVDASQLLDT 160 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV I ++KS+P+KAEPSPF+ A +M+ +V +Y WFV LV+E R++ + L Sbjct: 161 VGVQINAIKSAPLKAEPSPFAPAPEAAKEMINRLVMDTYEWFVALVAERRDMSMAEAKAL 220 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL---- 263 +DG I++G + K L+D +GG+ EV + I D P + + + Sbjct: 221 ADGSIFSGQQGLKNRLVDALGGENEVRRWFEEDRGIARDLVIVDREPKDDGFDFSMFAGA 280 Query: 264 -------KNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L S L K + GL ++W P Sbjct: 281 RAAIYGVFGLDPRSGSLTAAVLRKAGHLDGLVSLWQP 317 >gi|87118926|ref|ZP_01074824.1| Peptidase S49, SppA [Marinomonas sp. MED121] gi|86165317|gb|EAQ66584.1| Peptidase S49, SppA [Marinomonas sp. MED121] Length = 359 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 17/274 (6%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHV---EDNSPHVARIAIRGQIE-----DSQELIERIE 58 KI R + +L+ + + + + +S +VA I + GQI D+ ++ I+ Sbjct: 80 KIFFRGLSFALIISVIALVMSDADIAEMDTSSNYVAVIPMEGQIGAGQPIDANVVLPLID 139 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 AL++ ++SPGGS I+ AI+ + + P V ++AAS GY I+ Sbjct: 140 DAYAKPGIQALVLKMNSPGGSPVHSGIIYDAIKLKRQQYPDVPTYVVVEDLAASGGYYIA 199 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I+ + SLVGSIGV+ L K+GV + + KA PF + P +V Sbjct: 200 SAADTILVDKASLVGSIGVISAGFEATELLKKIGVERRVFTAGENKAFLDPFMPMAPASV 259 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + Q V+D ++ F+ V E R + L G +++G++A ++GL+D + ++ Sbjct: 260 KKWQAVLDETHKQFISAVKEGRGERLTDSPDLFSGAVFSGSQAVELGLVDGLSSFYQLVN 319 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + + K W +K+ +S Sbjct: 320 ------GEYKGLDVLYFREDKQPWEEVVKSFGVS 347 >gi|254480343|ref|ZP_05093591.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2148] gi|214039905|gb|EEB80564.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2148] Length = 615 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 140/278 (50%), Gaps = 23/278 (8%) Query: 32 EDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 P VA I +G + + L I + + D+S A+++ +++PGGS +A Sbjct: 319 GTGEPKVAVIVAQGNMLPGDQSPGTIGADSLATMISKTAADESVKAIVLRVTTPGGSMFA 378 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + I +V+ PV+ + +AAS GY I+ A++ I A +T++ GSIGV+ +P Sbjct: 379 SEIIRQQILEVRANGTPVVVSMGSIAASGGYYIAAAADEIFATKTTITGSIGVIAVFPTF 438 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L + G+ V ++ + +NP+ + +Q V +SY F+++V++ R++ Sbjct: 439 ENLLQRGGIYTDGVGTTSLAGSLRLDRPLNPELTKALQAGVANSYQLFLQVVADGRSMEL 498 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SIRKIKDWNPPKNYW 259 D+ +++GR+W+ ++A +GL+D +G ++ + L I ++ P + Sbjct: 499 DEVAAVAEGRVWSASDALSLGLVDQLGDLDDAINAAAGLADLDAFQIDYVEQPLSPSELF 558 Query: 260 FCDL-----------KNLSISSLLEDTIPLMKQTKVQG 286 F L ++ S+SSLL + P ++ T V G Sbjct: 559 FQQLAERMGSVGLLPRSHSVSSLLNLSKPYLEATGVLG 596 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 46/268 (17%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIR--GQIEDS--------------------- 50 ++ L+ L V+YF + + + P A + I G I D Sbjct: 28 LVFLLMLGVIYFVYFAGSTEPLPEQAALLINPMGTIVDQKSPVDPLQTLVAAPSPADHEV 87 Query: 51 --QELIERIERISRDDSATALIVSLSSPGGS-----AYAGEAIFRAIQKVKNR-KPVITE 102 +++IE I DD +L++ L GS + I A+++ K KPV+ Sbjct: 88 LVRDVIEAIRLAKDDDRINSLVMEL----GSLMYVGISRTQEIVVALEEFKTSGKPVVA- 142 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V + + YL++ ++ ++A G + + LDKL VS+ ++ K+ Sbjct: 143 VGDYFSQDQYLLASYADELIAHPIGGAALEGFSMYHNFYAEALDKLSVSMHVFRAGEYKS 202 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTG-- 215 P+ S+++ + ++ + + V +R +P +G R+ G Sbjct: 203 AAEPYLRSDMSTAQKSNALEWLEDLWASYTSTVEANRELPSGAVDAYVNGYASRLVAGDG 262 Query: 216 ---AEAKKVGLIDVVGGQEEVWQSLYAL 240 +A GLID + + + + L + Sbjct: 263 DSAKDALDAGLIDQLLTRSQANEYLSDM 290 >gi|34497270|ref|NP_901485.1| serine protease [Chromobacterium violaceum ATCC 12472] gi|34103126|gb|AAQ59489.1| serine protease [Chromobacterium violaceum ATCC 12472] Length = 312 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 113/282 (40%), Gaps = 12/282 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDN-----SPHVARIAIRGQIEDSQE----LIERI 57 KI R L ++ L + H A I + G I E +I + Sbjct: 30 KIFFRLAWLLVIGLIAASVFMRGEEKSGASLTGGGHTAVIELDGAISSENETGKKMISAL 89 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLI 114 + RD +I+ +SPGGS ++ I+++K PV V E+ AS Y I Sbjct: 90 DHAFRDKGTKGVIIDANSPGGSPVLSGMVYDEIRRLKKLHADIPVYVVVSEVCASGCYYI 149 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I + S+VGSIGVL ++KLG+ + + KA PFS NPK Sbjct: 150 AAAADKIFVDKASIVGSIGVLSDGFGFTGAMEKLGIDRRLKTAGENKAMGDPFSPPNPKH 209 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + Q ++D +H F++ V R K G +W G +A +GL D G V Sbjct: 210 DAIRQQLLDDIHHQFIQAVETGRGQRLKKDAQTFSGMVWLGEKAIPLGLADGYGTVASVA 269 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + + + D++ + SL + + Sbjct: 270 RDVVKAQKTVDFTQQDDFSSRVARRIGVEFAGGVKSLFDAKL 311 >gi|291514799|emb|CBK64009.1| signal peptide peptidase SppA, 67K type [Alistipes shahii WAL 8301] Length = 588 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 11/246 (4%) Query: 34 NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++ VA + GQI D + L +I + ++ A+++ ++SPGGSA A + Sbjct: 304 SADQVAVVYADGQIVDGEGYGKEIYGNTLAAKIAGVRDNEKVKAVVLRVNSPGGSALASD 363 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+R I+ ++ KPVI + AAS GY ISC ++ IVA + +L GSIGV + + Sbjct: 364 VIWREIELLRAEKPVIVSMGSYAASGGYYISCPADAIVADKMTLTGSIGVFGMFLDTRDA 423 Query: 145 LD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L KLG+++ VKS+ + S + P M+ VD Y F V+E RN+P K Sbjct: 424 LKNKLGITVDGVKSNASADFAA-TSPLTPLQRAMIMRGVDRVYTTFTNHVAEGRNLPIGK 482 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L ++ GR+W G +A +VGLID GG + ++ + + + Sbjct: 483 VLDIAGGRVWLGKDALEVGLIDTYGGLKTAIALAVDKAELGDGYRVVEVKEEPTGFAAII 542 Query: 264 KNLSIS 269 +L++S Sbjct: 543 ASLNVS 548 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 81/204 (39%), Gaps = 9/204 (4%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAASA 110 + +E DD + + ++ GG E + A+ + K I +E + Sbjct: 85 LRALEAARDDDRIKGIYLRMNGTGG-VTGSAILEELREALVEFKQSGKFIVAYNETYSQG 143 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV--KSSPMKAEPSP-- 166 GY ++ ++ I ++ G+ + K LDKL + + + K+ P Sbjct: 144 GYYLASVADKIYMQPEGMMEWAGLSMNLMFYKGLLDKLDLKAEVFRPTACKYKSAVEPYI 203 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGLID 225 + +++ + MQ +V S + V+E+R I ++D + EA + GL+D Sbjct: 204 YDKMSDANREQMQQLVSSMWGVIAESVAEARGIELKTLNEMADRLEVALPDEALEKGLVD 263 Query: 226 VVGGQEEVWQSLYALGVDQSIRKI 249 + ++++ LGV + Sbjct: 264 SLIYEDQMEDVFAELGVSDDYDFV 287 >gi|78356487|ref|YP_387936.1| signal peptide peptidase A [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218892|gb|ABB38241.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 320 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 19/280 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGG 78 + + + G I++ Q ++ R+ D + A+I+++ SPGG Sbjct: 38 GSGDAKIVVLPVAGVIDNKPERGIFADKPGLVQSVVARLRMAEMDPAVRAVILTVDSPGG 97 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S + + ++ I + K R V+ +MA S GY +S A++ I+A +++ GSIG +F Sbjct: 98 SVTSSDVLYNEIMRFKQRTGTRVVALQMDMATSGGYYVSIAADRIIAHPSTITGSIGTIF 157 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P V ++K+GV + KS K SPF E P+ ++Q++V + F++LVSE Sbjct: 158 MRPNVTGLMEKIGVQAVTTKSGAHKDIGSPFRENTPEEQAILQNMVTTLNSRFIKLVSER 217 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPP 255 R + + SD RI T EA ++GL+D +G + + + L G+D++ + P Sbjct: 218 REL-QGRESSYSDARIMTAQEALELGLVDSIGYFDNAVAAAHELAGLDEASVVVYRREPF 276 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQ--GLWAVWNP 293 N + S +PL + V G + +W P Sbjct: 277 PNDTPYNTITAQAGSAPLVEMPLARPLNVPSTGFYYLWAP 316 >gi|261400468|ref|ZP_05986593.1| signal peptide peptidase SppA [Neisseria lactamica ATCC 23970] gi|269209727|gb|EEZ76182.1| signal peptide peptidase SppA [Neisseria lactamica ATCC 23970] Length = 328 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 13/283 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS---HVEDNSPHVARIAIRGQIEDS-----QELIE 55 + K I L LV L F + N+PH A + + G+I + ++L + Sbjct: 43 MWKNIWRAVSTLILVALIAGIFQKDESALQLTGNTPHTAVVNLYGEIGNGVEDQVKKLKD 102 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGY 112 +E ++ A A+++ +SPGGS F I+++K + P V +M AS Y Sbjct: 103 GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCY 162 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A +S+VGSIGV+ ++K+GV + + K PFS P Sbjct: 163 YIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETP 222 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ ++++ + F++ V R + + + + GR++TGA+A+KVGL+D +G Sbjct: 223 EQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADAQKVGLVDGLGNI 282 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 V + + + D+ + L+ Sbjct: 283 YSVARDVVKAPDLVDYTRQDDFGTLLGRRLGAELKAGVREALQ 325 >gi|223936754|ref|ZP_03628664.1| signal peptide peptidase SppA, 36K type [bacterium Ellin514] gi|223894605|gb|EEF61056.1| signal peptide peptidase SppA, 36K type [bacterium Ellin514] Length = 354 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 25/248 (10%) Query: 32 EDNSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAY 81 D +A I + G I + E++ R DD A+I+ ++SPGG Sbjct: 61 NDAENKIAVIDVEGVIAGGASEQGSIGMVSSIKEQLRRAKADDLVKAVILRVNSPGGEVL 120 Query: 82 AGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I AI K + ++KPV+ + +AAS GY +S + IVA E ++ GSIGV+ Sbjct: 121 ASDEIANAITKFRTESKKPVVVSMGSLAASGGYYVSAPCDWIVANELTITGSIGVIMHGF 180 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFS---EVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + LDK+GV + KS K S EV P+ +M+Q ++D +++ F +V Sbjct: 181 NYRSLLDKVGVRPEVYKSGKFKDMLSGTKSPEEVLPEERKMVQALIDETFNKFKDVVRSG 240 Query: 197 RNIPYD---------KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSI 246 RN Y +DGRI +G EA+K+G +D VG E LG V + Sbjct: 241 RNAAYKAHQGRKLSSDWEDYADGRILSGKEAEKLGFVDQVGDLEVAVTKAEELGHVSKDQ 300 Query: 247 RKIKDWNP 254 + + P Sbjct: 301 ANLIQYQP 308 >gi|320354585|ref|YP_004195924.1| signal peptide peptidase SppA, 67K type [Desulfobulbus propionicus DSM 2032] gi|320123087|gb|ADW18633.1| signal peptide peptidase SppA, 67K type [Desulfobulbus propionicus DSM 2032] Length = 621 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 22/283 (7%) Query: 28 SSHVEDNSPH--VARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSP 76 SS+V+ + IA G I + +LI+RI + +D A+++ +++ Sbjct: 317 SSYVDTKGKKELIGIIAASGNILPGEGAVGQIGADDLIKRIRKARQDQRIKAIVLRITTG 376 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA A E I + + + K K V+ + MAAS GY ++ +++IVAA T+L GSIG+ Sbjct: 377 GGSALASELIRQELAQAKKEGKIVVVSMGAMAASGGYWLAADADLIVAAPTTLTGSIGIF 436 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 P V+ L LG+ V ++ + +P + ++P+ + V Y F+ +V++ Sbjct: 437 GAVPTVEKTLANLGIHGDGVGTTDIAHFGNPATTMSPEEETALHMEVMQGYRRFIDIVAQ 496 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + ++ +++GR+W G A K+GL+D +G EE L + P Sbjct: 497 GRKMRPEQVEKIAEGRVWDGTTALKLGLVDKLGNLEEAIAEAAKLAKVPEENGLFIELTP 556 Query: 256 KNYW----------FCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 NY L L+ S+ L ++ Q + L Sbjct: 557 DNYLERFKRVEQPIEALLARLTGSAALPVSLRRTAQEQFDFLL 599 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 39/276 (14%) Query: 12 YVMLSLVTLTVVYFS---------------WSSHVEDNSPHVARIAIRGQIEDS------ 50 ++ L L LTV +++ VE+ SP I G + + Sbjct: 31 FLALVLAILTVAFYTPKIDVPAACALVVSPAGDIVEERSPMDPMTRILGHLSGTPLEKDT 90 Query: 51 --QELIERIERISRDDSATALIVSLSSPGG-SAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 Q++++ + S D L+++ + GG S AI A++ K + + + Sbjct: 91 FLQDILDGVNAASGDARIKMLVINTNRMGGASLDQLRAIGTAVEAFKKTGKEVIALGDSF 150 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 A Y ++ ++ I V G Y++ LDKL +++ + K+ PF Sbjct: 151 NQAQYYLASWADKIYLHPMGAVDIRGFSVFRLYLREMLDKLAINMHVFRVGTFKSAVEPF 210 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK--------TLVLSD--GRIWTG 215 ++++P+ + + + + + + R + + L+ G G Sbjct: 211 LRNDMSPEDREANSLWLGNLWQVYRDDIVRHRKLDAEVFVDNVNQMVTQLASVGGD--RG 268 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIK 250 A GL+D + +E+ Q L +GV + + Sbjct: 269 RLAVATGLVDGLKSHQELEQLLKEHIGVSADAKSFR 304 >gi|265983331|ref|ZP_06096066.1| signal peptide peptidase SppA [Brucella sp. 83/13] gi|264661923|gb|EEZ32184.1| signal peptide peptidase SppA [Brucella sp. 83/13] Length = 239 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 86/187 (45%), Positives = 137/187 (73%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R++RI+ +D+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 51 NQPHIAKVRIEGTIFENEELLKRLDRIAGNDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 110 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 111 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 170 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 171 TIKSSPLKAEPNYFSPASEEAKNMIRGMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 230 Query: 214 TGAEAKK 220 TG +A Sbjct: 231 TGRQALD 237 >gi|254448114|ref|ZP_05061577.1| peptidase S49 [gamma proteobacterium HTCC5015] gi|198262240|gb|EDY86522.1| peptidase S49 [gamma proteobacterium HTCC5015] Length = 318 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 128/278 (46%), Gaps = 16/278 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIE-----DSQELIERI 57 + + T + L+ ++ + +S HVA + + G I + L+ + Sbjct: 33 IFMWMLTLLYLTVLILVSSGAWQFSGKSNPIKGEHVAVVQVNGIIAPDSDASADMLVPAM 92 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLI 114 +++A AL++ ++SPGGS E ++ I ++++ KPV + ++ AS Y I Sbjct: 93 RDAMENENAKALLLRINSPGGSPVQSELVYSEILRLRSEYPEKPVYAVIEDIGASGAYYI 152 Query: 115 SCASNIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 + A+ I A E+S+VGSIGV L+KLGV + S KA PF + Sbjct: 153 ASAAENIYAIESSIVGSIGVTSGGSFGFVKALEKLGVERRIYTSGENKAFLDPFLPEKQQ 212 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++ + +++S + F++ V++ R L G +WTG E+ ++GLID G + Sbjct: 213 DIERYESMLNSVHQQFIKAVTDERGERLKDDGELFSGYVWTGEESLELGLIDGFGDMRGI 272 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 + ++ +I D+ ++ +NL S+ Sbjct: 273 AREMF------ETDEIVDYTRQADFLTRFAENLGASAA 304 >gi|257076483|ref|ZP_05570844.1| putative signal peptide peptidase SppA [Ferroplasma acidarmanus fer1] Length = 239 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 6/237 (2%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +++ + +G I S + + I + + AL++ ++S GG A A E ++ + K+ Sbjct: 2 YISVLNFKGTITGSSPGTYMPALRYIEKKNKVKALLLIINSGGGDANATEILYNQLMKIS 61 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 ++KPV + + AS Y ++C++ I A TSLVGSIGV+ P FLD LG+ ++ Sbjct: 62 SKKPVYALIEGIGASGAYWLACSAEKIFAMRTSLVGSIGVISMSPDFSEFLDTLGIKMRI 121 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K K SPF + + + +++ Y F V + RN+ D ++ G +++ Sbjct: 122 NKVGKYKDINSPFRPMTEEENAIYNNIMKDVYSVFREEVKKRRNLGEDIMEEIATGLVFS 181 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 +AKK GLID + E V L A SI+ + PK + L ++S ++ Sbjct: 182 AEQAKKNGLIDGIANLETVVDELKAKTGTNSIKNL----TPKRPFISRLMSMSFEAI 234 >gi|325143533|gb|EGC65854.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240013] Length = 328 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DSSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 290 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 291 ---KAPDVVDYTPKDDF 304 >gi|117618146|ref|YP_857847.1| signal peptide peptidase SppA, 67K type [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559553|gb|ABK36501.1| signal peptide peptidase SppA, 67K type [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 614 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 16/262 (6%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + V I G I D L + + RDD AL++ + SPGGSA+A Sbjct: 320 QSGKDEVGLIVASGAIMDGVQPAGTIGGDSLADLLADARRDDKVKALVLRVDSPGGSAFA 379 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + +K KPV+ + AAS GY IS ++ I A+ T+L GSIGV + + Sbjct: 380 AEQIRAELLALKQAGKPVVISMGSYAASGGYWISADADKIFASPTTLTGSIGVFGMFATI 439 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + GV V ++ + Q +Q V+ +Y FV LVS+ R + Sbjct: 440 DKALSQYGVHTDGVGTTDYVGVG-LTRALPEHVGQAIQLNVEDTYQRFVGLVSKGRGLSP 498 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS--IRKIKDWNPPKNYW 259 ++T ++GR+WTG +AK +GL+D G QE ++ L + + I+ K+ + Sbjct: 499 EETEKAAEGRVWTGQDAKALGLVDEFGDQEAAIKAAAELANLKEWQVTPIEQEESAKDKF 558 Query: 260 FCDLKNLS---ISSLLEDTIPL 278 L + S ++S L++ +P Sbjct: 559 LRQLFDSSAQVLASHLQNWLPA 580 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 29/206 (14%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGE----AIFRAIQKVKNR-KPVITEVHEM 106 +L+ I+ DD AL++ P G + AI K KPVI + + Sbjct: 94 DLLWAIKSAKDDDRIKALVIK---PQGLQGTSFSKLQEVASAIDAFKESGKPVIA-MADF 149 Query: 107 AASAGYLISCASNIIVAAETSLV---GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 YL++ ++ ++ ++ V G +GV Y K L+KL ++ K K+ Sbjct: 150 YTQGQYLLAAHADHVLLNQSGAVVIEG-LGVYQTY--YKSALEKLNITPHVFKVGTYKSF 206 Query: 164 PSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----------KTLVLSDGR 211 P++ E++P++ + Q +D + +V V+E R I D + L + G Sbjct: 207 VEPYTRDEMSPESKEANQRWLDQLWQSYVADVAEQREIEPDAVAPGKDRFLELLRKAGGN 266 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 A GL+D + ++E+ Q++ Sbjct: 267 --AANYALDNGLVDQLATRDEMTQAV 290 >gi|254718370|ref|ZP_05180181.1| signal peptide peptidase SppA, 36K type [Brucella sp. 83/13] gi|306839601|ref|ZP_07472405.1| signal peptide peptidase SppA, 36K type [Brucella sp. NF 2653] gi|306405299|gb|EFM61574.1| signal peptide peptidase SppA, 36K type [Brucella sp. NF 2653] Length = 235 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 86/187 (45%), Positives = 137/187 (73%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 N PH+A++ I G I +++EL++R++RI+ +D+ +I+ L SPGG+ GEAI+ A++K+ Sbjct: 47 NQPHIAKVRIEGTIFENEELLKRLDRIAGNDAVKGVILLLDSPGGTTVGGEAIYDAVRKI 106 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LGV ++ Sbjct: 107 AKKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLGVKVE 166 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++G ++ Sbjct: 167 TIKSSPLKAEPNYFSPASEEAKNMIRGMIMDSYDWFVGIVQERRAFTHEQALALANGAVF 226 Query: 214 TGAEAKK 220 TG +A Sbjct: 227 TGRQALD 233 >gi|313157546|gb|EFR56964.1| signal peptide peptidase SppA, 67K type [Alistipes sp. HGB5] Length = 619 Score = 231 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 14/261 (5%) Query: 34 NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++ VA + G I D + L + + D+ A+++ ++SPGGSA A + Sbjct: 335 SADQVAVVYADGAIVDGEGFGKEIYGNTLAATLAGVRDDEKVKAVVLRVNSPGGSALASD 394 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-VKP 143 I+R ++ +K KPV+ + AAS GY ISC +++IVA + +L GSIGV Y + Sbjct: 395 VIWREMELLKAEKPVVVSMGSYAASGGYYISCPADVIVADKLTLTGSIGVFGMYLNTIDA 454 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 F +KLG++ +VKS+ + S + + VD Y F V+E RN+P +K Sbjct: 455 FKNKLGITFDAVKSNTSAGMGA-TSPLTAAERASIMRGVDKVYTTFTTHVAEGRNLPVEK 513 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ---SLYALGVDQSIRKIKDWNPPKNYWF 260 L ++ GR+W+G +A +GLID GG + LG + ++ + + Sbjct: 514 VLDIAGGRVWSGEDALGIGLIDTYGGLKTAIAIAVDKAGLGDSYRVTEVIEEPTGFAAFI 573 Query: 261 CDLKNLSISSLLEDTIPLMKQ 281 L ++ + L+ + Sbjct: 574 ASLNVSVREAMTRSELGLLMK 594 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 100/285 (35%), Gaps = 42/285 (14%) Query: 3 FVLKKIKTR------YVMLSLVTLTVVYFSWSSHVEDNSPHVAR-------IAIRGQIED 49 +V+ IKT +V+ S + + F VA I + D Sbjct: 26 YVMNFIKTFLAAILAFVVGSFLVFFLWIFILLGIAGSMEKTVAVHAESILKIDFSDVLTD 85 Query: 50 S----------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG--EA 85 + + + +E D + + ++ GG A E Sbjct: 86 APSSDPFAGIDFATLRSTRQLPLMKALRALEAAKDDSRIKGIYLRMNGNGGVMGAALLEE 145 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + A+ K + E + Y ++ A++ I + G+ F + K L Sbjct: 146 LREAVVDFKQSGKFVVAYDETYSQGKYYLASAADKIYMQPEGAMDWSGLAFNLMFYKGLL 205 Query: 146 DKLGVSIKSV--KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 DKL + + + K+ P+ +++ + MQ +V+S ++ V+E+R I Sbjct: 206 DKLDIKAEVFRPTACKYKSAVEPYILPKMSDANREQMQALVNSMWNTIAGSVAEARGIDL 265 Query: 202 DKTLVLSDG-RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + ++D + +A + G +D + ++++ LGV Sbjct: 266 KELNRITDKLEVSLPEDALEHGFVDSLIYEDQMKDIFAELGVASD 310 >gi|87123710|ref|ZP_01079560.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. RS9917] gi|86168279|gb|EAQ69536.1| signal peptide peptidase SppA (protease IV) [Synechococcus sp. RS9917] Length = 272 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 5/256 (1%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 IAI G I S + +++ + + + AL++ + SPGG+ + I A+ +++++ Sbjct: 19 IAIEGAIGASTRRRVLKALREVEK-REFPALLLRIDSPGGTVGDSQEIHAALLRLRDKGC 77 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G + AS +IV+ ++ GSIGV+ + + L+++G+ ++VKS Sbjct: 78 RVVASFGNISASGGVYVGVASEMIVSNPGTITGSIGVILRGNNLSKLLERVGIRFETVKS 137 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++ + ++Q ++DSSY FV+ V++ R + D +DGR+++GA+ Sbjct: 138 GAYKDILSPDRALSAEERDLLQSLIDSSYEQFVQAVAQGRQLEPDVVRQFADGRVFSGAQ 197 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 AK++GL+D +G +E + L + + P+ L + L + Sbjct: 198 AKELGLVDALGDEETARRKAAELAGLEVDSQPVTLGKPRKQLMGLLPGSGLLQQLGQLLE 257 Query: 278 LMKQTKVQGLWAVWNP 293 Q LW ++ P Sbjct: 258 SEVLLSHQPLW-LFRP 272 >gi|254432478|ref|ZP_05046181.1| signal peptide peptidase SppA, 36K type [Cyanobium sp. PCC 7001] gi|197626931|gb|EDY39490.1| signal peptide peptidase SppA, 36K type [Cyanobium sp. PCC 7001] Length = 270 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 6/265 (2%) Query: 33 DNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 +ARIAI G I +++ + ++ + AL++ + SPGG+ + I A+ Sbjct: 8 KTRRTMARIAIEGPIGGGTRTRVLKALRQVEQ-RECPALLLRIDSPGGTVGDSQEIHAAL 66 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + V+ ++AS G I A+ IVA S+ GSIGV+ + + L+++G Sbjct: 67 MRLRQKGCRVVASFGNISASGGVYIGVAAEKIVANPGSITGSIGVILRGNNLSKLLERIG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 VS ++VKS K SP + ++Q ++DSSY FV V+E R + + +D Sbjct: 127 VSFETVKSGLYKDILSPDRALTEAERGLLQSLIDSSYGQFVAAVAEGRGLEEEAVRSFAD 186 Query: 210 GRIWTGAEAKKVGLIDVVGG-QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GR+++GA+A ++GL+D +G + + G+D + + P + + S Sbjct: 187 GRVFSGAQALELGLVDSLGDEEAARRLAAELAGLDVEKTRPITFGAPPRRFAGLIPGRSQ 246 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWNP 293 + L Q LW ++ P Sbjct: 247 LRAVLQLFSLELGWGGQPLW-LYRP 270 >gi|94499597|ref|ZP_01306134.1| Periplasmic serine protease (ClpP class) [Oceanobacter sp. RED65] gi|94428351|gb|EAT13324.1| Periplasmic serine protease (ClpP class) [Oceanobacter sp. RED65] Length = 322 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 7/222 (3%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIE 58 + K+ T + + + + + SS + + A + +RG I D +E ++ + Sbjct: 37 IFFKLLTFVYLFAAILIFMPSDVDSSKLAASGKFTALVEVRGVIADGEEASADIIVTGLR 96 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISC 116 + A A+I+ ++SPGGS ++ I ++K +KPV + ++ AS Y ++ Sbjct: 97 NAFEAEGAQAVILRINSPGGSPVQSGYVYDEIMRLKELHQKPVYAVISDLGASGAYYMAA 156 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV+ +DKLGV + + KA PFS ++ K Q Sbjct: 157 AADEIYADKASLVGSIGVVGSGFGFVDAMDKLGVERRLFTAGEHKAFLDPFSPLDKKEEQ 216 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + V+ +++ F+ V + R L G +WTG +A Sbjct: 217 FWEQVLSTTHDQFIEQVKKGRGDRLVDNDKLFSGLVWTGEQA 258 >gi|72160983|ref|YP_288640.1| signal peptide peptidase A [Thermobifida fusca YX] gi|71914715|gb|AAZ54617.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Thermobifida fusca YX] Length = 569 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 11/250 (4%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV 103 G + S + +D + A++ ++SPGGS A + I+R + PV+ + Sbjct: 305 GAVMGSDTVAAAFRAARKDPNVRAVVFRVNSPGGSYTASDVIWREVVLTSQAGTPVVVSM 364 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++A S GY I+ +++I+A ++ GSIGV+ + L KLGV+ + S Sbjct: 365 GDVAGSGGYFIAAGADVIIAQPGTITGSIGVVVGKAVLSTMLAKLGVTSDWIDSGNHAGM 424 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 SP + + + ++D Y FV V+E R + D+ ++ GRIWTG +A + GL Sbjct: 425 FSPNRPFSESEWERVNTMLDHIYDDFVGKVAEGRKMTRDQVHEVAKGRIWTGQDACERGL 484 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 +D VGG E + G ++ + L+ L + ED + + Sbjct: 485 VDEVGGLETAIRIARDRGGLPPSAPVRHF-----PQLGPLERLIPAESSED-----RTAQ 534 Query: 284 VQGLWAVWNP 293 Q + W P Sbjct: 535 AQLRLSGWGP 544 Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 98/250 (39%), Gaps = 27/250 (10%) Query: 52 ELIERIERISRDDSATALIVSLSSPG-GSAYAGEAIFRAIQKVKNR-KPVITEVHEMA-- 107 +++E I R + D ALIV + S G A + + +A+ + K + Sbjct: 53 DIVEGIRRGAHDPRVKALIVKIGSQSLGMAL-VQELRQAVAMFRRAGKHTVAWSESFGEF 111 Query: 108 --ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 S Y ++ A + I + VG G+ + + L+KLGV + K + Sbjct: 112 GPGSLPYYLATAFDEIALLPSGSVGLTGLRVENLFFAEALEKLGVDYQGGARHEYKTALN 171 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 F+E + +V+S V +S R++ ++ L D + EA + GL Sbjct: 172 MFTERGFTDAHREASGRIVESLTEQLVAGISSGRDLSEERVRELIDQGPFLATEAVEAGL 231 Query: 224 IDVVGGQEEVWQSL----YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 +D V ++E++ L A G ++ + + ++ L D +P+ Sbjct: 232 VDKVAYRDEIYSDLLDRYSADGTPAHLQYVSRYQRTRS--------------LADRVPVA 277 Query: 280 KQTKVQGLWA 289 +++ L + Sbjct: 278 QRSGYVALIS 287 >gi|161870990|ref|YP_001600170.1| protease IV [Neisseria meningitidis 053442] gi|161596543|gb|ABX74203.1| protease IV [Neisseria meningitidis 053442] Length = 303 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 29 LILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 88 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 89 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPDIPVYLVAEDMCASGCYYIAAAADKIYA 148 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 149 DSSSIVGSIGVIGSSFDATELMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 208 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 209 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVV--- 265 Query: 242 VDQSIRKIKDWNPPKNY 258 + D+ P ++ Sbjct: 266 ---KAPDVVDYTPKDDF 279 >gi|313669287|ref|YP_004049571.1| protease [Neisseria lactamica ST-640] gi|313006749|emb|CBN88219.1| putative protease [Neisseria lactamica 020-06] Length = 328 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 13/283 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS---HVEDNSPHVARIAIRGQIEDS-----QELIE 55 + K I L LV L F + N+PH A + + G+I + ++L + Sbjct: 43 MWKNIWRAVSTLILVALIAGIFQKDESALQLVGNTPHTAVVNLYGEIGNGVEDQVKKLKD 102 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGY 112 +E ++ A A+++ +SPGGS F I+++K + P V +M AS Y Sbjct: 103 GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCY 162 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A +S+VGSIGV+ ++K+GV + + K PFS P Sbjct: 163 YIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETP 222 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ ++++ + F++ V R + + + + GR++TGA+A+KVGL+D +G Sbjct: 223 EQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADAQKVGLVDGLGNI 282 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 V + + + D+ + L+ Sbjct: 283 YSVARDVVKAPDLVDYTRQDDFGTLLGRRLGAELKAGVREALQ 325 >gi|240013099|ref|ZP_04720012.1| putative protease [Neisseria gonorrhoeae DGI18] gi|240122291|ref|ZP_04735253.1| putative protease [Neisseria gonorrhoeae PID24-1] Length = 328 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 10/272 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E + A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGKIGNGVEDQVKKLKDGMEAAYKKPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ ++K+GV + + K PFS P+ ++ ++++ Sbjct: 174 DPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFSPETPEQSKIWEEMLT 233 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + + GR++TGA+A KVGL+D +G V + + Sbjct: 234 GIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLVDGLGNIYSVARDVVKAP 293 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 D+ F S+S L+ Sbjct: 294 DVVDYTPKDDFGRILGRRFGAELKASVSEALQ 325 >gi|114776783|ref|ZP_01451826.1| protease IV [Mariprofundus ferrooxydans PV-1] gi|114552869|gb|EAU55300.1| protease IV [Mariprofundus ferrooxydans PV-1] Length = 609 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 116/217 (53%), Gaps = 10/217 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSP 76 + S ++ V I G I D S ++E +++ D++ A+++ + SP Sbjct: 302 AVSEKEHKHAGRVGIIVASGMILDGEQPPGSIGSDTMVEMLQQAREDNAIKAVVLRIDSP 361 Query: 77 GGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA A E I AI ++ K KPV+ + +AAS GY ++ +N I A+ T++ GSIG Sbjct: 362 GGSAQASEEIRTAIMRLQKAGKPVVVSMGGVAASGGYWMAAPANEIWASPTTITGSIGAF 421 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++ L++LG+ + ++ + P + P+ ++MQ + Y F+ +V+ Sbjct: 422 GVMLNLQQGLEQLGIHSDGLGTTTIAGGMRPDRAMPPELSRVMQLTISDVYQHFLSVVAS 481 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 R + + +++GR+W+G +A+++GL+D +GG ++ Sbjct: 482 GRKMDKSRVAAIAEGRVWSGLDAQRLGLVDHLGGFDD 518 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 77/208 (37%), Gaps = 24/208 (11%) Query: 52 ELIERIERISRDDSATALIVSLS----SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +L I + D +++ L S S + + RAI+ + ++ Sbjct: 83 DLTAAIRDAAGDKRIRLMVLKLDDMSRS---SLPVLQELRRAIEAFRATGKMVIAEGPNY 139 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ A+N + V G Y++ LDKL ++ + ++ K+ P Sbjct: 140 TQSQYYLAAAANTVFLHPMGYVAIEGFSIYRNYIRDALDKLHITAEVFRAGKYKSAIEPL 199 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----------GRIWTG 215 ++++ + ++ + + +++ ++ RN+ + + D G Sbjct: 200 LRNDMSDADREANGALLKTLWGSYLKDIARMRNLRPQRLQQVLDTPSRYLNDYHGN--LA 257 Query: 216 AEAKKVGLIDVV---GGQEEVWQSLYAL 240 AK GL+D + G ++ + Sbjct: 258 ELAKGEGLVDELADQGTIDDYIAGAMDI 285 >gi|254513823|ref|ZP_05125884.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR5-3] gi|219676066|gb|EED32431.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR5-3] Length = 587 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 9/251 (3%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV 103 G I L + ++ A+++ +++ GGS +A E I I +++ PV+ + Sbjct: 317 GTI-GGDTLSRLLRNTAQRADTKAIVLRVNTGGGSVFASEIIRAEIARIRQAGTPVVVSM 375 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AAS GY I+ A++ I+A T++ GSIGV +P V+ L K G+ V ++ + Sbjct: 376 GSVAASGGYYIATAADRIIATPTTITGSIGVFAAFPTVERLLAKGGIHTDGVGTTGLAGG 435 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 P ++P ++Q VD Y F++LVS+ R+I + ++ GR+ + +A + GL Sbjct: 436 LRPDRALDPAVSDVLQQSVDDLYAQFLQLVSQGRSIDMETLDSIAQGRVLSARDALEAGL 495 Query: 224 IDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 +D +G + Q L G Q + P + L+ LS + + + + Sbjct: 496 VDGLGSLDYAVQEAATLAGFSQDDYNVISIMPEFSSRDLLLQQLS------ERMGVSRLL 549 Query: 283 KVQGLWAVWNP 293 V GL +W P Sbjct: 550 AVPGLALLWGP 560 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 94/254 (37%), Gaps = 46/254 (18%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVA-RIAIRGQIEDSQ--------------------- 51 ++ L L V++ ++S E A + + G++ D + Sbjct: 6 VVFLAILVVLWVTFSGKPEPLPERAALVLDLAGRVVDERSQIEAASLIFAQEPSSREILL 65 Query: 52 -ELIERIERISRDDSATALIVSLSSPGG--SAYAGE--AIFRAIQKVKNR-KPVITEVHE 105 +LI+ ++ S D+ +AL++ L G S + + AI + + KPV+ + + Sbjct: 66 MDLIDSVDIASSDERISALVLQLD---GLVSIGQSKTTELGEAIARFRETGKPVVA-IGD 121 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + Y ++ ++ ++ V G Y L+KL V++ ++ K+ Sbjct: 122 YYSQDQYRLAVEADAVLMHPFGAVALEGYSVYSNYFADALEKLSVTMHVFRAGEYKSIAE 181 Query: 166 PFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL----------SDGRIW 213 P +++ + ++ + + + V E R + L G Sbjct: 182 PLQRNDMSDGERAITKEWLQDLWSAYAAAVEERRGLETGALDALLNNFPQRLRDEGGN-- 239 Query: 214 TGAEAKKVGLIDVV 227 G A + GL+D + Sbjct: 240 AGRLALQAGLVDEL 253 >gi|90417463|ref|ZP_01225386.1| signal peptide peptidase SppA [marine gamma proteobacterium HTCC2207] gi|90330704|gb|EAS45983.1| signal peptide peptidase SppA [marine gamma proteobacterium HTCC2207] Length = 616 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 11/253 (4%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSS 75 S +V P +A + G I D L E I +D A+++ + S Sbjct: 313 LSSLKNVNKGRPEIAVVVASGSIIDGNQPEGTIGGDTLAEMFSAIEDEDQVKAVVLRVDS 372 Query: 76 PGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGGSA+A + I +I ++ + PV+ + AAS GY I+ S+ I+A T++ GSIGV Sbjct: 373 PGGSAFASDVIRDSIASLRKKNIPVVISMGSYAASGGYWIATESDKILALSTTITGSIGV 432 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 P + L +G+ V ++ + + P+A +MQ V+ Y F+ LV+ Sbjct: 433 FGVIPTFEDSLSAMGIYSDGVGTTNIAGMMQLSRAMTPEAEMIMQSGVEHVYGRFLTLVA 492 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 ++R ++ GR+WTG +A ++GLID +G + L K+ Sbjct: 493 DARESTPSAIHKIAQGRVWTGKKALELGLIDELGDLNDAIAIAATLAGVGDY-KVNYRRK 551 Query: 255 PKNYWFCDLKNLS 267 P ++ + +S Sbjct: 552 PLSFMEQVMMEIS 564 Score = 99.9 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 25/208 (12%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 +++++ ++ D+ T +++ S GGS E I A+Q+ K KP+I + Sbjct: 91 RDMVQALDHAQYDERITHVLLDTDYIS-GGSIAKLEEISAALQRFKQSGKPIIAIGDNFS 149 Query: 108 ASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 S Y ++ ++ I+ +GS+ G Y K LDKL +++ + K+ Sbjct: 150 QS-QYFLAAHADEIIMNP---LGSVMLTGFGSYSSYYKEALDKLKINVHIFRVGKYKSAV 205 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----------DGRI 212 PF + ++ +A +D++DS + ++ V + R +P L+ +G I Sbjct: 206 EPFLGTGMSEEARADRRDLLDSLWQFYTSRVEQLRGLPKGALNDLANNMHLKLAEENGDI 265 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 A A + GL+D + + E L + Sbjct: 266 --AALALQQGLVDRIATRSETKAHLLQI 291 >gi|253827669|ref|ZP_04870554.1| protease IV [Helicobacter canadensis MIT 98-5491] gi|253511075|gb|EES89734.1| protease IV [Helicobacter canadensis MIT 98-5491] Length = 277 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 119/235 (50%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI 70 + L + + V+ F SS + +VARI ++G I S +E + ++ + + ++ Sbjct: 3 YFKALVFLLIVVLIFMPSSSENSSLANVARIDLKGMIIQSDSFLEELSKLENNPNIKGVL 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + + SPGG+ I A+++++++KP++ AS YL ++ I+A + +LVG Sbjct: 63 LVIDSPGGTIPPSVEISEAVKRMRSKKPIVAYAQGSMASGSYLAGVWADRIIANKGALVG 122 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ V +KLG+ + +K+ K + N +M++ ++ Y FV Sbjct: 123 SIGVILNGVDVSELAEKLGIKTQILKAGIYKEAGTFMRPWNQAEEEMLKGLIKEQYEMFV 182 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 V +RN+ K + GR+++ + A K+GL+D + E ++L+ L Q+ Sbjct: 183 SEVVAARNLEITKEGEFAQGRVFSASNALKLGLVDSISSIYEAQKTLFELAKIQN 237 >gi|109898682|ref|YP_661937.1| signal peptide peptidase SppA, 67K type [Pseudoalteromonas atlantica T6c] gi|109700963|gb|ABG40883.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pseudoalteromonas atlantica T6c] Length = 620 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 11/214 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 H+ V + +G I + ++ E + + DDS ++++ + SPGGS Sbjct: 323 PHLNTGIDKVGVVVAKGTILNGEQKPGTVGGDSTAELLRKARLDDSIKSVVLYVDSPGGS 382 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A+A E I + I+ +K KPV+ + AAS GY IS +++ I AA +++ GSIG+ + Sbjct: 383 AFASEIIRQEIENLKAAGKPVVALMSTYAASGGYWISASADEIWAAPSTITGSIGIFGMF 442 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + LD LGV V ++ ++PK Q++Q ++ Y F+ LV+E R+ Sbjct: 443 VSFENTLDYLGVHTDGVGTTDFAGMG-ITRGIDPKMGQVLQRSIEHGYDQFISLVAEERH 501 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + ++ GR+W G A K+ L+D +G ++ Sbjct: 502 MSKESVDNIAQGRVWIGETALKLNLVDHLGYIDD 535 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 99/290 (34%), Gaps = 45/290 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F K ++ + + ++F + + + I+G I Sbjct: 19 LNFSRKLFFNLIFLVIAIGIISLFFRDNGQIGVKQDSALVLNIKGDIVIQKHAIDPFEAF 78 Query: 51 ----------------QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQK 92 Q+++ ++ +D AL++ L S G E + +AI Sbjct: 79 MQEALGQANEKPEVLLQDILLTLDNAKQDRRIKALVLDLHELSGAG-LDKLEQVAQAIDD 137 Query: 93 VK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K + KPV + + Y I+ ++ + + G Y K L+K+ + Sbjct: 138 FKLSEKPVYA-IGDYYTQEQYYIASHADHVYMNPMGWMLFEGYGRFGMYYKSALEKIKAT 196 Query: 152 IKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----KTL 205 K K+ P +++ A + + ++ + + V+E+R + D K Sbjct: 197 THVFKVGTYKSAVEPLLRDDMSQPAKEANKAWLNGMWSQYKNSVAEARGLSTDNFDEKVD 256 Query: 206 VL------SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++G A G +D + +E+V Q L ++ K+ Sbjct: 257 EFMVKFEDANGDF--AQYALDNGWVDGLKTREQVLQELVSVVGKDEDAKL 304 >gi|298676111|ref|YP_003727861.1| signal peptide peptidase SppA [Methanohalobium evestigatum Z-7303] gi|298289099|gb|ADI75065.1| signal peptide peptidase SppA, 36K type [Methanohalobium evestigatum Z-7303] Length = 366 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 133/264 (50%), Gaps = 14/264 (5%) Query: 6 KKIKTRYVMLSLVT--LTVVYFSWSSHVEDNSPHVARIAIRGQI-----------EDSQE 52 + + +++++++ + +++ + + VA I ++G + S++ Sbjct: 65 QYLTIFFLLITIIAASFAAIVYTFDGDLYSTNDKVAVIHVQGTMITGSIPGGIGYSTSED 124 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 + I + S A+++ ++SPGGS A E I R I++ K++ PV+ + ++AASA Sbjct: 125 VASSIRKASDRSDVKAIVMRVNSPGGSPSAAEEISREIERAKDKGIPVVVSMGDVAASAA 184 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y +S +++I+A +++ GSIGV++ + F D+ G+ + +KS +K +P+ + Sbjct: 185 YYVSAPADVIMANPSTMTGSIGVIWTFQNRSEFYDEEGIEHEVIKSGELKDMGAPWRGLT 244 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + +V Y FV V+E+R++ +SDGRI+TG AK++GL+D G Sbjct: 245 EEERNYANKIVQEIYKNFVDHVAENRDLNRSFVNEISDGRIYTGMRAKELGLVDKFGNLY 304 Query: 232 EVWQSLYALGVDQSIRKIKDWNPP 255 E LG + + N P Sbjct: 305 ESINLAAELGDIRGEPDVIYLNKP 328 >gi|116626894|ref|YP_829050.1| signal peptide peptidase SppA, 67K type [Candidatus Solibacter usitatus Ellin6076] gi|116230056|gb|ABJ88765.1| signal peptide peptidase SppA, 67K type [Candidatus Solibacter usitatus Ellin6076] Length = 573 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 15/263 (5%) Query: 34 NSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPGGS 79 VA + G I S + + R+ D A+IV + SPGG Sbjct: 288 GKSQVALVVGAGDIVRGDANDDGSGESNLTSYGFNKILRRVGSDSQIKAVIVRIDSPGGE 347 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I+R + + +KP++ + + AAS GY ++ + IVA + GSIGV+F P Sbjct: 348 VTASDEIWREMNLLAKKKPMVISMSDTAASGGYYMAMTGDPIVAYPATFTGSIGVVFGKP 407 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 ++ +KLG+S +++ S ++ + P+ ++ +D SY FV V+ +R+ Sbjct: 408 NIRGLYEKLGISKDAIQRGKNADIDSDYTPLTPEQRAKLRAGIDESYQDFVTKVANARHR 467 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-PPKNY 258 +D+ ++ GR+W G++AK GL+D GG ++ + + + ++ P + Sbjct: 468 TFDQIDQVAQGRVWLGSQAKPRGLVDETGGLDKAIELVKQKAKIPASERVTLMVFPGRRN 527 Query: 259 WFCDLKNLSISSLLEDTIPLMKQ 281 L S ++E + + Sbjct: 528 ILDILMKKSQEDMMEMKLAQVLG 550 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 107/263 (40%), Gaps = 29/263 (11%) Query: 12 YVMLSLVTLTVVYFSWSSHVED-NSPHVARIAIRGQIEDSQELI---------------- 54 V LS++ L VV + S V + + G++ + + Sbjct: 13 LVFLSIILLFVVALRFREKPPVIASDSVLVMRLEGELPEKTPVEIPAILGGDHTPATVVG 72 Query: 55 --ERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNR-KPVITEVHEMAA 108 +++ + D A+++ P G + + + I K K KPV + + A Sbjct: 73 VWSALDKAAADPHIRAVVLQ---PEGISAGWAKLQELRLDIDKFKKSGKPVFAYLRQPGA 129 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y I+ ++ + + V G+ + Y K LDKLGV+++ + K F+ Sbjct: 130 RE-YFIASDADRVYLGPSDPVMLKGLRAEMMYFKKTLDKLGVNVEIEHAGKYKDFGDMFT 188 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +++P+ ++M VVD Y V ++ +R ++ + D +T ++A K GL+D Sbjct: 189 RSDMSPETREVMTSVVDDLYSDLVSGIATARKKTPEEVRAIIDQGPFTASQALKAGLVDE 248 Query: 227 VGGQEEVWQSLYALGVDQSIRKI 249 + ++++W L K+ Sbjct: 249 LRFEDQMWGELKERLKSGEPSKV 271 >gi|328948927|ref|YP_004366264.1| signal peptide peptidase SppA, 36K type [Treponema succinifaciens DSM 2489] gi|328449251|gb|AEB14967.1| signal peptide peptidase SppA, 36K type [Treponema succinifaciens DSM 2489] Length = 343 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 127/232 (54%), Gaps = 9/232 (3%) Query: 35 SPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + ++A++ I+G I +S + ++ IE + D + +++ ++SPGG Y + +F Sbjct: 71 NEYIAKLFIKGVISESNDSYNQEWILSTIENLQEDTNNRGIVLVINSPGGGVYQADEVFL 130 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFL 145 A++K K + +PV +AAS GY + CA++ I+A SL GSIGV+ Q+ + + Sbjct: 131 ALEKYKKKTERPVYAYFTSLAASGGYYVGCAADYIMANRNSLTGSIGVIAGQFTDLTGLM 190 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +K G+ ++ S K + + + ++MQ + D Y F +V+ESR + ++ Sbjct: 191 EKWGIKSTTIHSGRNKLMGNFNEPMTQEQQEIMQSIADECYEQFTDIVAESRGLSKEEVY 250 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L+DGRI+T ++AK+ LI+ +G +E+ +++ D + + D++ K Sbjct: 251 KLADGRIYTASQAKEASLINSIGTLDELIETMQRKEFDFAEYETADFSYQKE 302 >gi|313681597|ref|YP_004059335.1| signal peptide peptidase sppa, 36k type [Sulfuricurvum kujiense DSM 16994] gi|313154457|gb|ADR33135.1| signal peptide peptidase SppA, 36K type [Sulfuricurvum kujiense DSM 16994] Length = 290 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 115/241 (47%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 LK I+ + LV + + SS ++ +IA+ G I D+ ++ +I+ +D Sbjct: 16 LKFIQEHFKATVLVLIVLWLIIPSSENGITPHNLQKIALSGPILDATPIVAQIDEAREND 75 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 ++ S+ SPGG+ I AI+++ KP + + AS GY N I+A Sbjct: 76 GIKGVLFSIDSPGGAVAPSVEIAYAIKRLSETKPTVVYAAGIMASGGYYSGIWGNEIIAN 135 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S++GSIGV+ + + ++K+GV + V + K + E + + V+D Sbjct: 136 PGSMIGSIGVIMEGADISGLMEKVGVKTQVVHAGTYKQVGTFDREWSAAERAELNKVIDG 195 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 +Y FV V+ +R + ++ +D I+T +AKK GL+D +G + + + + L + Sbjct: 196 TYSMFVVDVARARKLDPLRSGEYADAHIFTALQAKKAGLVDSIGVEYDAKKRVEELSKVK 255 Query: 245 S 245 Sbjct: 256 D 256 >gi|302828750|ref|XP_002945942.1| signal peptide peptidase [Volvox carteri f. nagariensis] gi|300268757|gb|EFJ52937.1| signal peptide peptidase [Volvox carteri f. nagariensis] Length = 683 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 20/252 (7%) Query: 32 EDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPG 77 VA + G I D+ +L ++ + D + TA++V ++SPG Sbjct: 331 GKRRSKVAVVTASGPIVQGPVPPGQSQGQVIDATKLCRQLAALLEDSTVTAVVVRVNSPG 390 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA A +++ + +++ V+ S GY ++ A++ IVA SL GSIGVLF Sbjct: 391 GSALASDSLHHELVRLRAAGKVVVV------SGGYYLAAAADHIVAQPGSLTGSIGVLFG 444 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 YV L++ G+ + V SPF+ P M+ ++D Y F+ VS R Sbjct: 445 KVYVGKTLEEAGIRSEGVTVGRNADALSPFTGFTPDQEAQMEALIDHVYQDFLEKVSRGR 504 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 P ++ L+ G+++TG +A +VGL+D +GG E Q L ++ + P + Sbjct: 505 GRPVEEVRQLAKGKVYTGRQAHEVGLVDELGGLETAVQRAKQLAGLPEDAEVVSYPPRRI 564 Query: 258 YWFCDLKNLSIS 269 L S + Sbjct: 565 PLLLQLLRRSGA 576 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 14/110 (12%) Query: 52 ELIERIERISRDDSATALIVSL---SSPGGSAYAGEAIFRAIQKVKNRK-----PVITEV 103 +L+ + ++D+ ++ L GG A A + + A+ ++ PV Sbjct: 60 QLVSALRSAAQDERCRGVVTYLGAREHLGGLATA-QELRDALLAFRSATSGRSAPVAAFA 118 Query: 104 ---HEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 E +S YL++ A + + + L+G G+ + + + LD+L Sbjct: 119 ASFGEAGSSGMVPYLVASACDEVYMQPSGLLGLTGLESRAFFARGLLDRL 168 >gi|254818384|ref|ZP_05223385.1| hypothetical protein MintA_00577 [Mycobacterium intracellulare ATCC 13950] Length = 595 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 21/275 (7%) Query: 35 SPHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSPGG 78 P VA I + G I D S + + + DDS +A++V ++SPGG Sbjct: 301 KPTVAVINVDGTIVDGRGGPQFLPFGTSTVGSDTIAPALREAAADDSVSAIVVRVNSPGG 360 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S A E ++R ++K + R KPV+ + +AAS GY I+ A++ +VA+ ++ GSIGVL Sbjct: 361 SVTASETLWREVKKARKRGKPVVASMGSVAASGGYYIAVAADAVVASPATITGSIGVLTG 420 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 ++ L +LGV +V+++ + + P+ + D Y FV V++ R Sbjct: 421 KLVIRDLLGRLGVGSDTVRTNANADAWAIDTPFTPEQRAHREAEADLLYADFVARVADGR 480 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 N+ D ++ GR+WTGA+A + GL+D +GG + L ++ P Sbjct: 481 NLTKDAVDRVARGRVWTGADALERGLVDELGGFRTALRRAKILAGLDEDADVRIVTYPGG 540 Query: 258 YWFCDLK----NLSISSLLEDTIPLMKQTKVQGLW 288 L+ + ++ L D + + + G+ Sbjct: 541 SLLDMLRPRASSQPAAASLPDALGALLGRTIGGIV 575 Score = 99.1 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 84/228 (36%), Gaps = 11/228 (4%) Query: 51 QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ + I R + D LI + SP + A + + AI KP + Sbjct: 69 RDTVSAIYRAAEDPRVAGLIARVQLTASP---SAAVQELREAIVAFTAAKPSLAWAETYP 125 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y ++ A + VG IG +++ DK G+ + V K+ + F Sbjct: 126 GTLSYYLASAFGEVWMQPAGSVGLIGFASNATFLRDAFDKAGIEAEVVARGEYKSAANRF 185 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 +E + + +++S V SR + L+D EA GL+D Sbjct: 186 TEHGFTEAHREAVTRMLESIREQVWEAVGTSRKLDAAALDALADRAPLLREEAVSSGLVD 245 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +G ++E + + L ++ + + N P + + S L+ Sbjct: 246 RIGFRDEAYDRIAEL---VGVKDVSEENAPPRLYLSRYAGAARSRLIP 290 >gi|315453141|ref|YP_004073411.1| protease IV [Helicobacter felis ATCC 49179] gi|315132193|emb|CBY82821.1| protease IV (PspA) [Helicobacter felis ATCC 49179] Length = 285 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 136/281 (48%), Gaps = 7/281 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K KT +V LSL+ FS + P++A+I + G I +S+ ++++R+ Sbjct: 12 LDFITKYFKT-FVFLSLLFFA---FSLNKDEGHAQPNLAKIYLHGPIFESESFRDQVDRV 67 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGGS A + + ++ PV+ V + AS Y +N+ Sbjct: 68 LKIPSIKGVLLLIDSPGGSISASVELSDIVATLRKTMPVVAYVQGVMASGSYYTGMQANL 127 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +LVGSIGV+F + +DKLG+ + + K + K Q + D Sbjct: 128 IYANRGALVGSIGVIFSGANIAALMDKLGIKSQGMAKGEYKEVGTFTRAWTDKEKQFLGD 187 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ Y+ FV V+++R + K+ + ++G+I++ +A + LID VG ++ +L L Sbjct: 188 LLSEQYNMFVSDVAKARGLDPKKSNIFAEGKIFSATQAANLHLIDHVGTYDQAVYALQKL 247 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 ++ +K + F D S S +L + + Sbjct: 248 TQVKNPIWLK---KDRLEMFMDKFLQSSSQVLSQVLGYQLR 285 >gi|296270823|ref|YP_003653455.1| signal peptide peptidase SppA, 36K type [Thermobispora bispora DSM 43833] gi|296093610|gb|ADG89562.1| signal peptide peptidase SppA, 36K type [Thermobispora bispora DSM 43833] Length = 563 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 10/247 (4%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 S + +DD A++ + SPGGS A +AI+R + + KPVI + ++ Sbjct: 301 MGSDTICAAFRAARKDDKIKAVVFRVDSPGGSYVASDAIWREVLLTRQAGKPVIVSMGDV 360 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY +S A+N+I A +L GSIGV P + L KLGV+ ++V S Sbjct: 361 AASGGYFVSMAANVIFAHPGTLTGSIGVYGGKPVISELLGKLGVTSEAVSMGENAEMFST 420 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E + + + +D Y FV V+++R + D L+ GR+WTGA+A + GL+D Sbjct: 421 SREFSAAQWERLNTWLDRVYEDFVTKVADARGLSKDHAHELAKGRVWTGADAVRNGLVDE 480 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 +GG E+ + + ++ + L+ + ED M + +V+ Sbjct: 481 LGGLEDALALARSRAGLPATAPVRIY-----PHLNPLERIRPPESSEDRSAAMARLRVEA 535 Query: 287 LWAVWNP 293 W P Sbjct: 536 ----WGP 538 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 15/212 (7%) Query: 51 QELIERIERISRDDSATALIVSL-SSP-G-GSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 +++ + R RD AL+V + ++P G G + + AI K++ K I Sbjct: 53 DDVLAGLNRARRDPRVKALLVKIGNAPLGLGMV---QELRTAIIKLRAAGKRTIAFAESF 109 Query: 107 A-ASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 S G Y ++ A + I + VG G+ + +++ L K GV + + K Sbjct: 110 GEVSTGTVPYYLATACDRIYLQPSGDVGLTGLSVETRFLRDALAKAGVEFQLGQRHEYKT 169 Query: 163 EPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 + F++ + + +V+S+ + +++ R + + L D + GAEA + Sbjct: 170 AANVFTQNHMTEPHRESTARIVESAMEQVIEGIAQGRRLDPARVRELVDRGPFLGAEAVE 229 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 GL+D + ++EV+ +G D +R + + Sbjct: 230 AGLVDGLKYRDEVYAE--TVGEDGRLRYVTRY 259 >gi|257126290|ref|YP_003164404.1| signal peptide peptidase SppA, 36K type [Leptotrichia buccalis C-1013-b] gi|257050229|gb|ACV39413.1| signal peptide peptidase SppA, 36K type [Leptotrichia buccalis C-1013-b] Length = 549 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 125/270 (46%), Gaps = 11/270 (4%) Query: 29 SHVEDNSPHVARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 E +A I + G I+ + E++E + + L++ ++SPGGSA Sbjct: 276 DKKEKAKDTIAVINLEGVIDMKNPNKNITYDNVCEKLEELKEIKNLKGLVLRINSPGGSA 335 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ YP Sbjct: 336 LVSEKIYKKLKKL--TVPIYVSMGDLCASGGYYIATTGKKLFANNFTLTGSIGVVMMYPE 393 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V + KL V+++ +PF E+ + + + ++ Y F V +R + Sbjct: 394 VVGTMKKLDVNLEGFGKGAGFDMLNPFEELGEDSKEKLIHNMNEVYGEFKEHVMVARGMN 453 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYW 259 ++ ++ GR+W G+EAK + L+D +G E+ +++ L +D+ +I + Sbjct: 454 DEELEKIAQGRVWLGSEAKNINLVDEIGTLEDCIKAMANDLKLDKYKVQIVELTQTLKET 513 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 D+K +S + + + ++ Q L+ Sbjct: 514 LSDIKMPFVSEEIREKVEFLQGNINQVLYY 543 Score = 80.6 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 111/262 (42%), Gaps = 35/262 (13%) Query: 1 MEFVLKKIKTRYVMLSL-VTLTVVYF------------------SWSSHVEDNSPHVARI 41 M F+LK + +ML L V L++++ + V+ VA Sbjct: 1 MMFILKMLLEIVIMLILCVILSLIFVKKILRVKNKKKLPLKKVKTVVFDVKKLKEDVAMP 60 Query: 42 AIRG-QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 A++G + ++++ + ++ D + +I+ + + E I + K+K K V+ Sbjct: 61 ALKGKEKLSYYQILQGLNNLAEDKNIKKVIIDVDKLNLTLSQLEEISKIFDKIKKNKEVV 120 Query: 101 TEVHEMAASAGYLISCASNIIVA---AETSLVGSI--GVLFQYPYVKPFLDKLGVSIKSV 155 + + + Y + +N I +++L I G L + Y+K FL+K G+ + + Sbjct: 121 A-IGTLFEESRYRQAMLANKIFMFDTRQSTL---IFRGYLHKEFYLKSFLEKFGIRMNVL 176 Query: 156 KSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RI 212 K FS +++ + + ++++ D + FV LV R + + G I Sbjct: 177 HIGDYKVAGEKFSHNQMSEEKKESIKNIKDKVFEDFVELVKSKRGTDIEN--EILSGNLI 234 Query: 213 WTG-AEAKKVGLIDVVGGQEEV 233 + G +A + LID V +E+ Sbjct: 235 FAGKKKALEYKLIDGVADYDEI 256 >gi|39995926|ref|NP_951877.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] gi|39982690|gb|AAR34150.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens PCA] gi|298504941|gb|ADI83664.1| signal peptide peptidase SppA, 36K type [Geobacter sulfurreducens KN400] Length = 321 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 20/281 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSP 76 + + + + I G I D + + E + + RD LI+ ++SP Sbjct: 41 GEGTKKILIVDISGAIGDQAKGGGLLSRGTPSTVSLVREVLLKAERDPKVAGLILRINSP 100 Query: 77 GGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GG+ A + I + K R+ PV + + AS GY ++ A++ I A T+L GSIGV Sbjct: 101 GGTVTASDIIRHDLLAFKERRNLPVSACIMGIGASGGYYVATAADGITAHPTALTGSIGV 160 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 L V+ L K+GV K++KS K SPF P+ +++Q V+D + FV +V Sbjct: 161 LLMTFNVEGLLGKVGVEEKTIKSGGKKDLLSPFRRATPEEERLVQGVIDQFHGRFVDVVQ 220 Query: 195 ESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + L L+DGRI++ A+A GLID +G ++V SL D R + + Sbjct: 221 ARPGNRLSRHDLLTLADGRIFSAADALAAGLIDRIGYLDDVIASLRDRIGDPDARVVTYF 280 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P +Y + + D + T +W P Sbjct: 281 RPG-SYQGSIYAESAAEPSMADLLGGFDMTGGGQFMYLWRP 320 >gi|183220418|ref|YP_001838414.1| signal peptide peptidase SppA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910532|ref|YP_001962087.1| periplasmic serine protease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775208|gb|ABZ93509.1| Periplasmic serine protease (ClpP class) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778840|gb|ABZ97138.1| Signal peptide peptidase SppA, S49 family [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 332 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 28/293 (9%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALI 70 F + + I+I G I D + + E ++R RD +I Sbjct: 40 FEEKLIAGKDQEKIVIISIEGMISDEGKEAFFGPSSDSMVVRVKESLKRAERDPDVKGVI 99 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSL 128 + ++SPGG+ A + I++ I+K K RK PV + AAS Y I+ A++ I A T++ Sbjct: 100 LKINSPGGTVTASDIIYQEIKKFKERKGIPVFAGFMDTAASGAYYIAMATDSIGAHPTTV 159 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GS+GV+ VK LDK+G+ +S S P KA SP +E+ + +++Q ++DS Y Sbjct: 160 TGSVGVIMSGINVKEGLDKIGIKDQSFTSGPNKALGSPTTEMTAEQRKILQSIIDSLYSR 219 Query: 189 FVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA----LGVD 243 F +V + R + + + DGRI+T +A+K G+ID +G + L G Sbjct: 220 FFEVVKKGRPKVSEARLKEICDGRIFTAEQAQKEGMIDFIGYFDNFVIELMKHPKYEGNP 279 Query: 244 QSIRKIKDWN----PPKNYWFC-DLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 Q +I + P +N + D+K IS + D L+ +W Sbjct: 280 QGSPRIVTYQRGKVPVENIYQATDVKGNPISFGIADK--LLGTGTNAKFLYLW 330 >gi|15022428|dbj|BAB62249.1| proteinase IV [Treponema medium] Length = 606 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 23/287 (8%) Query: 22 VVYFSWSSHVE--DNSPHVARIAIRGQI----------EDSQELIERIERISRDDSATAL 69 + Y+S++ + + + I + G I DS L++ + + DDS A+ Sbjct: 308 INYYSYNKSFKKKETDNQIGVIYLTGSITGTSDNTSDNADSPTLVDLFDEAADDDSIKAV 367 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++ + S GG A E I R+++++ + KPV+ + ++AAS Y I+ +++ I + + Sbjct: 368 VLRIDSGGGEVNASEDIRRSLERLSKKIGKPVVVSMGDIAASGAYWIASSADYIFCSPYT 427 Query: 128 LVGSIGVLFQYPYVKPF-LDKLGVSIKSVK-SSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + GSIGV P ++ + G+ + V S M S F + V + Sbjct: 428 ITGSIGVFAVSPSIQKAVQEYFGIHVDGVSVSGRM--PYSIFRNPTDAEKTQSELEVMHT 485 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ V++ RN+P L+ G+I++G +AK++ L D +GG + + Sbjct: 486 YSIFLDTVAQGRNLPRATVEELAQGKIYSGTQAKELQLADELGGFTDAVNYAATKAGIKE 545 Query: 246 IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +K + + + +LL D + K +Q L+ ++ Sbjct: 546 TYSLKVLYKEP-----PVTDEILKTLLADNVRFYKTADLQVLYELFR 587 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 19/216 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSP--GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 ++ + + + D TA++ L S G S + A+ + K+ KP+ Sbjct: 96 DITDALRHAAHDRRITAVLFDL-SGLYGISTGHFTELKTALLEYKDANKPLYAFSTNYGL 154 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y I+ ++ I V G + + KLGV + K+ + Sbjct: 155 -GRYYIASFADHIYLDPMGEVDLSGFYTESLFYGEMEHKLGVQWNVAHAGAFKSMAETYS 213 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----------DGRIWTGA 216 +E++ V+ +H +++ ++ +R ++ + +G + Sbjct: 214 RTEMSAGVRNNNLSVLKDLWHMYLQDIAANRADDANRFETYTVNYNDALRKVNGN--SAQ 271 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 A LI +G EE L L + +D+ Sbjct: 272 AALDANLITDIGTYEECGVELGVLDEETYNLSSRDY 307 >gi|251771849|gb|EES52423.1| signal peptide peptidase SppA, 36K type [Leptospirillum ferrodiazotrophum] Length = 334 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 3/275 (1%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 VV+ + D + G+ + + L +E+ RD A+++ + SPGGS Sbjct: 54 VVFLPIHGFIGDQEKKGGTPLLGGKTDQVRLLDRELEKARRDPHVRAIVLDIDSPGGSVT 113 Query: 82 AGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + ++ I + + + PVI ++ AS Y + ++ + A TS+VGSIGV+ Sbjct: 114 ASDRLYHKILLFRQRTKIPVIAFFGDLGASGAYYTAMGADEVWARPTSVVGSIGVMIANV 173 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V+ + K+GV+ ++V S K SPF E+ P+ ++ + +V Y F+ +V R + Sbjct: 174 GVEGLMKKVGVTDRTVASGAEKEMGSPFREMTPEDRRIFEGLVADFYATFLEVVERGRRM 233 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSIRKIKDWNPPKNY 258 + L+DGR++T +A GL+D VG + ++ L LG+++ + + + Sbjct: 234 EANHLRPLADGRVFTARQALADGLLDRVGYRSDLIDHLKKKLGMNKLMLVTYRESDEGSP 293 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + S+ + + ++ W+P Sbjct: 294 SLLGMDAGGFRSVSAQALAGLIRSLGPTPLYFWSP 328 >gi|116749395|ref|YP_846082.1| signal peptide peptidase SppA, 36K type [Syntrophobacter fumaroxidans MPOB] gi|116698459|gb|ABK17647.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Syntrophobacter fumaroxidans MPOB] Length = 329 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 23/284 (8%) Query: 32 EDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGG 78 + V I ++G I D+ QE++ ++++ +D + A+++ + S GG Sbjct: 42 GEGKDKVLLIPVKGFISDTSRGFVLRQKPAMVQEIVSQLKKAEKDKTVKAVLLKVDSSGG 101 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S A + ++ I + K R ++ + AAS GY I+ ++ IVA +++ GS+GV+F Sbjct: 102 SVSASDILYHEIMEFKRRSGAKLVAVLMGTAASGGYYIALPADSIVAHPSTITGSVGVIF 161 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P V +DK+G+ ++ KS K SPF + + Q++Q ++D F+ L Sbjct: 162 IRPKVTGLMDKIGLEVEVDKSGRNKDMGSPFRKTTAEEQQILQHLIDELARKFIDLTVAH 221 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + +S R++ EA ++GL+D VG ++ + L ++ + Sbjct: 222 RRLEPAALADVSTARVYLAEEALRLGLVDKVGYVDDALREAQTLAGLPPNARVVVYR-RA 280 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQ-------GLWAVWNP 293 Y +L N+S S I L+ G + +W P Sbjct: 281 EYPDDNLYNVSTSKSDGGRISLIDLGPADSFSSLHSGFYYLWLP 324 >gi|99082363|ref|YP_614517.1| peptidase S49 [Ruegeria sp. TM1040] gi|99038643|gb|ABF65255.1| peptidase S49 [Ruegeria sp. TM1040] Length = 265 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 11/260 (4%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPG 77 S+ P VA + + G I + L +ER A+ + ++SPG Sbjct: 1 MSFRLPFTKRPPQVAVVRLSGAIGMAGRGSLNDSTLAPVLERAFTKGKPKAVALEINSPG 60 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS I I+++ + PVI V ++AAS GY ++ A++ I A +S+VGSIGV+ Sbjct: 61 GSPVQSALIGARIRRLAEERDVPVIAFVEDVAASGGYWLAAAADEIYADASSVVGSIGVI 120 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 FL + G+ + + K+ PF N + V ++ +++ + F+ V++ Sbjct: 121 SAGFGAHVFLARQGLERRVHTAGESKSMLDPFRPENEEDVARLKGLLNDIHANFIDHVTD 180 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R L G IW AK++GLID +G V Q + V IK P Sbjct: 181 RRGEKLSTEEKLFTGEIWLARRAKELGLIDGIGHLRPVLQERFGDKVRLRRHGIK--KPF 238 Query: 256 KNYWFCDLKNLSISSLLEDT 275 + + + +++++ E Sbjct: 239 LSRFGLSMAEDALAAVEERA 258 >gi|269121370|ref|YP_003309547.1| signal peptide peptidase SppA, 36K type [Sebaldella termitidis ATCC 33386] gi|268615248|gb|ACZ09616.1| signal peptide peptidase SppA, 36K type [Sebaldella termitidis ATCC 33386] Length = 584 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 136/292 (46%), Gaps = 23/292 (7%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----------ELIERIERISRDDSAT 67 + + ++ V + +A I G I + + E+I+++ + ++ Sbjct: 287 IIDIYDYAAKMRVPEKKDKIAVIYAEGPIMYDENTGNNIAITPVSIAEKIKQLKKVNNLK 346 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGGSA + E I++ ++ PV + AAS GY I+ A + I A +++ Sbjct: 347 GVVLRINSPGGSALSAELIYQMFSEM--PVPVYVSMGSTAASGGYYIAMAGDKIFADKST 404 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GS+GV+ P +K LG+ S+ PF +++ ++ + ++ + +Y Sbjct: 405 ITGSVGVVSTIPKIKKAAGNLGIDSSSITKGKYSDLYDPFVDLSEESTERLRTSMQDTYK 464 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--- 244 F V ++R I DK + G++W G EAK++GL+D +G ++ Q++ Q Sbjct: 465 EFKSRVEKNRGISADKLEEYAQGKVWLGDEAKEIGLVDQIGSLDDTIQAMAKDLKLQNYS 524 Query: 245 --SIRKIKDWNPP----KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 I +D+N Y + + I ++ + I +KQ + L+ + Sbjct: 525 VEEIFVKEDYNKVLQRLSGYITAQVTLMDIPKVMNE-IEFLKQNSAKPLYYL 575 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 112/292 (38%), Gaps = 53/292 (18%) Query: 3 FVLKKIKTRYV--MLSLVTLTVVYFSWSSHVED--------NSPHVARI-----AIRGQI 47 F +K+I + ++ +L++V T+V+ +++ + N + + ++ Sbjct: 13 FTIKEIYSFFLKLLLAIVVFTIVFLIFAASMGKILEQKNTVNKNYEYVVFNPYDPTEDKL 72 Query: 48 EDS-----------QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKV- 93 + +++ ++ I++D +I++L S I I K Sbjct: 73 NNKLFVNSKYNVNFYKIVNSVDYIAQDPKVKGVIINLDQIS-----LNSSQIEELIPKFE 127 Query: 94 ---KNRKPVITEVHEMAASAGYLISCASNIIVAAET-----SLVGSIGVLFQYPYVKPFL 145 K+ K + + Y ++ ++ I + S+ G + Y K Sbjct: 128 KIKKSGKKIYAY-GSYIDNNKYSLAVNASEISMVPSASADLSITG---YHYSSLYYKNLF 183 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 DKLG+ IK + K+ + + ++ + + + D F +S++R I +K Sbjct: 184 DKLGIDIKVIHIGDFKSYGENYTRTSISDELKGELTRIFDRRLDIFTENISKARKIDKNK 243 Query: 204 T-LVLSDGR--IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + +G T A+ G ID + +++Q L D++I I D+ Sbjct: 244 LSADVMNGDSSFLTPFNARDRGFIDKLEYSGQLFQRLGI--TDENIIDIYDY 293 >gi|257463195|ref|ZP_05627594.1| protease IV [Fusobacterium sp. D12] gi|317060783|ref|ZP_07925268.1| protease IV [Fusobacterium sp. D12] gi|313686459|gb|EFS23294.1| protease IV [Fusobacterium sp. D12] Length = 564 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 7/270 (2%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 YFS ++A + + G IED ++ +E I RD++ +I+ ++SPGGSA Sbjct: 290 YFSLVKIKNRPKQYLALLTLEGTIEDETLFLDEVEAIQRDNNVKGVILRINSPGGSALVA 349 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++ A++K++ + PV + AAS GY ++ A I A+ S+ GSIGV+ P Sbjct: 350 DMMYHAVKKLREKVPVYVSISGTAASGGYYVAVAGEKIFASPLSITGSIGVVSMIPNFSH 409 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +K VS++S+ S ++ + ++ Y F+ +VS +R I + Sbjct: 410 LREKAEVSVESISKGKYADLYSYLKPLSEENYNRIRQGNLGVYKDFLEVVSSNRKIETNF 469 Query: 204 TLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 L+ GR+W GAEAK+ LID +GG E YAL D+++ + KN F Sbjct: 470 LDQHLAQGRVWLGAEAKEHKLIDELGGLEATI---YALEQDKNLGALPILQVSKNDVFGQ 526 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 L +P+ Q K+ +WN Sbjct: 527 YLGKYRKFLT--FLPMTLQNKIPKD-RLWN 553 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 70/162 (43%), Gaps = 8/162 (4%) Query: 52 ELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 E++ ++ I +D ++++ S + E I +QK++ + + A Sbjct: 87 EVLYALDSIRQDPRIKGVLLNADFLSW--NKAQVEEIGTKLQKLQEEGKDLIVTLQEANR 144 Query: 110 AGYLISCASNIIVAAETSLVGS-IGVL-FQYPYVKPFLDKLGVSIKSVKSSPMKAEPS-- 165 A Y ++ + IV S I ++ Y K LD+ G+++ + K+ Sbjct: 145 ANYFLASYAQKIVMPPIHAASSNISPYHYEELYWKSLLDRFGITMNVIPIGDYKSYMENY 204 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 S ++P+ + M+ +++ +Y + + L++E+R I + Sbjct: 205 SHSHMSPEFRENMKRLLEHTYQYSLHLMAENRKINKNDLESW 246 >gi|296447328|ref|ZP_06889256.1| signal peptide peptidase SppA, 36K type [Methylosinus trichosporium OB3b] gi|296255193|gb|EFH02292.1| signal peptide peptidase SppA, 36K type [Methylosinus trichosporium OB3b] Length = 325 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 149/269 (55%), Gaps = 11/269 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 SPH+AR+++ G I +E ++ ++ I D A+A+++++ SPGG+ E + ++++ Sbjct: 52 SPHIARLSVSGIITGDKETLDLVKSIGEDAKASAVLLAIDSPGGTTTGAERLHDELRRLA 111 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV+ V +AAS GY+ + A++ IVA SLVGSIGVLFQ+P V LD +GV +++ Sbjct: 112 AKKPVVAVVGTLAASGGYIAAIAADEIVAHGNSLVGSIGVLFQFPNVGKLLDNVGVQMET 171 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 VKSSP+KA P+ F + +A + +V SY WF LV E R + + ++DGR++T Sbjct: 172 VKSSPLKAAPNGFEPTSEEARAAIAALVADSYDWFKGLVKERRKLDDSELAKVTDGRVFT 231 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP---KNYWFCD--------L 263 + + L+D++GG+ E + L + DW + + D L Sbjct: 232 ARQGLPLKLVDLIGGEREAIEWLETEKGVAKRLPVVDWKKKNAIERFGLVDSAAGVAAAL 291 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +++ L+ + ++ + G+ A+W Sbjct: 292 GLDALAQALQRVGTVAERGLLDGVVAIWQ 320 >gi|15602536|ref|NP_245608.1| hypothetical protein PM0671 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720949|gb|AAK02755.1| SppA [Pasteurella multocida subsp. multocida str. Pm70] Length = 627 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 16/260 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYA 82 E+ +A + + G I D + + + + DD+ A+I+ ++SPGGSA+A Sbjct: 324 EEGQYKIAVVNVEGAIIDGESDEHEVGGDTIARLLRQAHDDDNVKAVILRVNSPGGSAFA 383 Query: 83 GEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + ++ KPV+ + MAAS GY IS ++ I+A + ++ GSIG+ +P Sbjct: 384 SEIIRQEVDNLQALGKPVVVSMGAMAASGGYWISSTADYIIADKNTITGSIGIFALFPTF 443 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L K+G+S V + + S FS ++ + ++Q ++S Y F+ +VS R + Sbjct: 444 EKTLKKVGISADGVST-SALSSSSRFSGLSSEMSDILQLEIESGYDKFLSVVSRGRGMTV 502 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ ++ G+IW G EA K L+D +G + L ++ D +Y+ Sbjct: 503 EEVDKVAQGKIWLGEEAVKHNLVDELGHFNLAVEKASELAN-----QLLDEKEKVDYFAL 557 Query: 262 DLKNLSISSLLEDTIPLMKQ 281 + L D +P +K+ Sbjct: 558 QWMVEDEQNFLSDLLPTLKR 577 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 37/238 (15%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVE-----DNSPHVARIAIRGQIEDSQE---- 52 E V+ + +V+L V V F S+ ++ +N + + + G + D++E Sbjct: 20 ELVMNIVFLFFVLL--VAAVVGIFFHSNKIQHPMMLENEKYALLLNLDGYLADNREESMS 77 Query: 53 ---------------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAI 90 ++ I+ +DD + L++ L+ G+ E + + I Sbjct: 78 WQKALKELDNQHVPRQISTFDIVYMIDHAKKDDRISGLVLDLNFFEGADLPALEYVGQTI 137 Query: 91 QKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 K +KPVI + S YL++ ++ I V G+ + Y K L+ L Sbjct: 138 NAFKESQKPVIAFADNLGQS-QYLLASYADEIYINPIGQVDITGLRQENLYFKSMLENLD 196 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 V+ + K+ PF ++P+A + + + + +H + ++V+++R I D L Sbjct: 197 VTAHIFRVGTYKSAVEPFLRDNMSPEAKTDLSEWLGAMWHNYKQIVAKNRQIDPDDVL 254 >gi|328949857|ref|YP_004367192.1| signal peptide peptidase SppA, 36K type [Marinithermus hydrothermalis DSM 14884] gi|328450181|gb|AEB11082.1| signal peptide peptidase SppA, 36K type [Marinithermus hydrothermalis DSM 14884] Length = 544 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 21/270 (7%) Query: 34 NSPHVARIAIRGQI-------------------EDSQELIERIERISRDDSATALIVSLS 74 ++ VA + + G I S+ L+ + D A+++ + Sbjct: 267 SARRVAVVPLVGAIVTGPSRRVPLPLPILGGDQAGSESLLRALRLAEADPKTAAIVLYVD 326 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA A + I R + ++K KPV+ + +AAS GY ++C + IVAA T+L GSIGV Sbjct: 327 SPGGSALASDLILREVARIKKTKPVVAVLGPVAASGGYYVACQATRIVAAPTTLTGSIGV 386 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + ++ F + G++ +++ + + ++Q ++ Y FV V Sbjct: 387 VTLFGILEEFNHRYGLNPEAITLGRFAELGTSRRAPTEEERALIQRYIEEVYARFVARVV 446 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + + GR+W G +A ++GL+D +G E L WN Sbjct: 447 EGRGLEPARVDEIGRGRVWAGQDALELGLVDELGDVERGLALARELADLPPDAP--AWNV 504 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 P + S+ L+ PL+ + + Sbjct: 505 PMPKPLILPRPDQPSAFLKVLAPLLAERAL 534 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 96/217 (44%), Gaps = 15/217 (6%) Query: 51 QELIERIERISRDDSATALIVSLSS---PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 ++L E+++ +++ +++ + P G+ +A + A+Q++++ K + + + Sbjct: 60 EQLTEKLQALAQAPWVEGVVLRIEGLRAPYGTVFA---LREAVQRLRDAGKQTLAYLTRV 116 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS- 165 S Y ++ A+ I E++ +G+ +VK FLD+ G+ + K+ Sbjct: 117 DFS-SYYLASAAQTIAVPESAEFSLLGLKLSVTFVKDFLDRYGIRFEKQAIREYKSAGDN 175 Query: 166 -PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S ++ + +++ + F + V+E+R + D I + EA+ GL+ Sbjct: 176 LVHSRMSEANREQYTTLLERFFEVFAQAVAEARGVDPQTVRDWIDAGITSAKEAQARGLV 235 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 D V ++E+ Q + Q R + PPK F Sbjct: 236 DRVAYEDELIQKHH-----QPYRAAARFLPPKLRVFS 267 >gi|14520806|ref|NP_126281.1| putative protease [Pyrococcus abyssi GE5] gi|5458022|emb|CAB49512.1| Putative protease [Pyrococcus abyssi GE5] Length = 335 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 111/224 (49%), Gaps = 3/224 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 S +V + +A + I G I+ S +I+ I I +D+ +++ + SPGG Sbjct: 81 SENVTTANATIAVLPIIGPIDSSSALGIIKAIREIRGNDTIKGVLLWIESPGGYVGPVRE 140 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++K+ KP++ V A S Y I+CA+ I+A S VGSIGV++ + + + Sbjct: 141 IYNELKKLGYLKPIVAYVSGYAYSGAYYIACAAREIIAEPLSEVGSIGVIYVHFNAEEYY 200 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G+ ++ K+ P K + + + P+ ++++ + + ++ F+ +VSE RN+ ++T Sbjct: 201 KMNGIEVEVFKTGPYKDMGADWRGLTPEERDIIKNEIQTYFNDFLEVVSEGRNMTINETK 260 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + GR W + L+D +G + + L L + I Sbjct: 261 KFATGRAWFAKD-VNGTLVDKLGDFDVALKELLKLIGAKKANVI 303 >gi|298708810|emb|CBJ30769.1| signal peptide peptidase [Ectocarpus siliculosus] Length = 625 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 16/242 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALI 70 S +VA + G I S L +R++ + D S A++ Sbjct: 297 SAKGAKNPAPKNVALVNANGAITRFADPGVGPGSTEQATSSALCKRLQEVIDDPSIGAVV 356 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + + SPGGSA A ++I A+++V+ KPV+ + ++AAS GY+I+ A + IVA T++ Sbjct: 357 LRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTIT 416 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ V+ L G+ + S++ S SP E +P+ +M+ V Y F Sbjct: 417 GSIGVIAAKLSVQRLLKAWGIQVDSIELSENHLAFSPLQEFSPQQRSLMEKRVGEIYEDF 476 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V V+ RN+ D+ L ++ GR+WTG +A GL+D +GG G ++ Sbjct: 477 VGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARV 536 Query: 250 KD 251 + Sbjct: 537 VE 538 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 30/216 (13%) Query: 48 EDSQELIERIERISRDDSATALIVSLS--SPGGSAYAG-EAIFRAIQKVKN--------- 95 +++++++ +E ++D+ ++ S S GG A + + A+ + + Sbjct: 1 METRDVVDALEMAAKDNKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATA 60 Query: 96 ----------RKPVITEVHEMAASAG-----YLISCASNIIVAAETSLVGSIGVLFQYPY 140 RK V + G Y ++ A ++ +T VG G Q + Sbjct: 61 GEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLF 120 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + FLDK G+ + K+ +P + M ++ S V+ SR Sbjct: 121 FRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRG 180 Query: 199 -IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + A LID + +++V Sbjct: 181 FKDRKDVYAIMHDCPLPATLALSANLIDGIMYEDDV 216 >gi|283778612|ref|YP_003369367.1| signal peptide peptidase SppA, 36K type [Pirellula staleyi DSM 6068] gi|283437065|gb|ADB15507.1| signal peptide peptidase SppA, 36K type [Pirellula staleyi DSM 6068] Length = 352 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 134/286 (46%), Gaps = 25/286 (8%) Query: 10 TRYVMLSLVTLT-----VVYFSWSSHVED--------NSPHVARIAIRGQIEDSQELIE- 55 + + +L+ +T YF S + + +A I+I G I + ++ Sbjct: 30 AAFFLCALILMTQWSTMAEYFDTSGGITEKFVSGDKFGDDKIAIISIEGVIAEGDGFVKR 89 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGY 112 +I+R+++D++ A++V + SPGG+ + I ++K++ K P++ + MAAS GY Sbjct: 90 QIDRVAKDENVKAIVVRVDSPGGTVTGSDYILHHLKKLRKEKSDIPLVVSMGSMAASGGY 149 Query: 113 LISCAS----NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 +S A N+I A T+ GSIGV+ + + + K + S+ S K + Sbjct: 150 YVSMAVGDQENVIYAEPTTTTGSIGVIIPHYDISGLMAKFDIKDDSIASHERKQMLTMTK 209 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESR---NIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + +++Q V+ S+ F ++ E R K L+ G I++ +A K GL+D Sbjct: 210 PIPQEHREIIQGYVNESFGRFKSIIKEGRPGFKADESKLDQLATGEIFSADQALKHGLVD 269 Query: 226 VVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +G E+ L +D++ ++ ++ P + + +S ++ Sbjct: 270 KIGFIEDAIDRALELAKLDKAKTRVVEFEKPASLFDVGAIAMSRAA 315 >gi|323345102|ref|ZP_08085326.1| signal peptide peptidase SppA [Prevotella oralis ATCC 33269] gi|323094372|gb|EFZ36949.1| signal peptide peptidase SppA [Prevotella oralis ATCC 33269] Length = 589 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 17/272 (6%) Query: 32 EDNSPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPG 77 ++ +A +G I S + + +E++ DD A+++ ++S G Sbjct: 296 KETGDEIAVYFAQGTIVQNAAAGLFSQSAQIVSTTVCKDLEQLMNDDDVKAVVIRVNSGG 355 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G AYA E I+ + K+K +KPV+ + + AAS Y +SC ++ IVA T+L GSIG+ Sbjct: 356 GDAYASEQIWHQVAKLKTKKPVVISMGDYAASGAYYMSCVADWIVAQPTTLTGSIGIFGV 415 Query: 138 YPYVKPFL-DKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 P + KLGV VK++ + +N + + V+ Y F + V++ Sbjct: 416 IPDYSGLVTQKLGVKFDEVKTNKNSGFGNILARPLNADEIGYLTAYVNRGYQLFRKRVAD 475 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + + ++ G +W G +A L+D +GG L + ++ Sbjct: 476 GRRMSVPQVEKIAQGHVWLGQDALINRLVDQLGGLSTAVTKAAQLAKVKEYH-TTEYPAA 534 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + S L++ + + Sbjct: 535 PSILDQLFSSATRGSYLDEQLRTTLGDFYEPF 566 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 102/275 (37%), Gaps = 34/275 (12%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------- 50 L +L +++L + + SS + V + + G I++ Sbjct: 15 LFVFSIVVTILCVMSLVGMVAADSSTKSVSENSVFVLNLAGTIQEQGENNVLGQLTGNTL 74 Query: 51 -----QELIERIERISRDDSATALIVS---LSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 +++ I + +D + + L + S + I A+ K I Sbjct: 75 NNLGLDQILSGIRKARDNDRIKGIYIEAGLLET---SYATLQEIRNALLDFKKHGKWIVT 131 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + Y +S ++ I ++ G+ Q ++K K G+ + VK K+ Sbjct: 132 YADTYTQGTYYVSSVADKIFINPQGMLDWHGLSAQPMFIKDVAAKFGIRYQVVKVGAYKS 191 Query: 163 EPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEA 218 ++E ++ + + +D ++ + V++SR + D +D R I+ G E Sbjct: 192 ATEYYTEERMSDANRRQVTAFIDGTWRNVCKEVAQSRKVSVDSLNAYAD-RLLIFEGTEN 250 Query: 219 -KKVGLIDVVGGQEEV---WQSLYALGVDQSIRKI 249 KK L+D + + V + + + D +I ++ Sbjct: 251 LKKYKLVDGLIYADNVKTEVKKMLKIDDDDAIAQL 285 >gi|119505648|ref|ZP_01627718.1| protease IV [marine gamma proteobacterium HTCC2080] gi|119458460|gb|EAW39565.1| protease IV [marine gamma proteobacterium HTCC2080] Length = 611 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 120/248 (48%), Gaps = 12/248 (4%) Query: 30 HVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSA 80 +E+ P +A I I G++ S ++ ++ER A+++ ++SPGGS Sbjct: 318 EIEETKPRIAVIPIEGELIPGESGRGFAGSDTVVSQLERALEQPDLRAVVLRINSPGGSV 377 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 +A E I + I ++K PV+ + +AAS GY I+ ++ I+A +++ GSIGV +P Sbjct: 378 FASEVIRQKILEIKAADLPVVASMGAVAASGGYYIAADADEILAQPSTITGSIGVFAAFP 437 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V+ GV+ V +S + + V+ +++ ++ Y FV LV+ R Sbjct: 438 TVEKLYQWAGVTSDGVSTSSLATAARVDTGVSDTGRRIINSMISKVYDDFVTLVALGRGK 497 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP--PKN 257 +++ ++ GR+W+G +A VGL+D +GG + S L + P P+ Sbjct: 498 TWEEINSVAGGRVWSGEDALSVGLVDNLGGLQAALDSAAGLAEIEDFDTFYIGTPISPEQ 557 Query: 258 YWFCDLKN 265 +F + Sbjct: 558 RFFEQIGK 565 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 76/191 (39%), Gaps = 19/191 (9%) Query: 52 ELIERIERISRDDSATALIVS---LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 + + I+ + DD TALI+ L+ P S + + AI+ K+ KPVI + Sbjct: 92 RVKKAIKEAAADDRITALILDLEALNGP--SISHVQELKAAIEIFKSAGKPVIATGDYYS 149 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S YL++ + ++ + G YV+ LD + +++ + K+ P+ Sbjct: 150 QS-QYLLASQATQVLLHPEGGIEVSGFAVYRNYVRKLLDNVYLTMNVFRVGESKSAVEPY 208 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTGAEA-- 218 +++ +++ + + + +LV R + + +G +A Sbjct: 209 LRDDMSGLEREVVGQWLGDVWRSYTQLVEAPRQMDAGFVDQFIN-EFPDRLEISGGDAAA 267 Query: 219 --KKVGLIDVV 227 + G +D + Sbjct: 268 LMLEAGFVDEL 278 >gi|153004053|ref|YP_001378378.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] gi|152027626|gb|ABS25394.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. Fw109-5] Length = 831 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 97/196 (49%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I ++ + ++ R + D + A+++ + SPGG A + I+R +Q+ + RKPVI + + Sbjct: 565 AIAGAETISAQLRRAADDSAVKAIVLRVDSPGGDGVASDRIWREVQRARRRKPVIASMGD 624 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 +AAS GYL + ++ I+A ++L GSIGV P + L KLGV + S Sbjct: 625 LAASGGYLAAVGADEILAEPSTLTGSIGVFALKPDLSGLLSKLGVGRDATARGENAQLTS 684 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ +D Y FV V+E R + ++ GR+WTG +A++ L+D Sbjct: 685 VAKPWAGPERAAVEREIDRFYAHFVARVAEGRKLDPAVVETVAAGRVWTGRQAQERHLVD 744 Query: 226 VVGGQEEVWQSLYALG 241 +G E+ Q Sbjct: 745 RLGSLEDALQLARERA 760 Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 L+ R+ D A+ V + G A E + A+ +++ RKPV+ + A G Sbjct: 325 RLLRRLGEARDDPEVAAIAVRIEGLGLGAGRAEELRGALARIRERKPVLAYL----AGGG 380 Query: 112 ---YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y I+ A+ + A S + G+ +VK L +LGV+ + VK K P P Sbjct: 381 TTEYWIASAATALAAQPGSTLFVNGLSTSTLFVKDTLARLGVAFEVVKRGAYKTAPEPLV 440 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 S+ +P+A ++ V+D Y V V+ +R +P ++ L D ++ +A++ GL+D Sbjct: 441 RSDASPEAREVTASVLDDLYARIVADVAAARRLPEERVRALVDRGLFGAEDAQREGLLDA 500 Query: 227 VGGQEEVWQSLYAL 240 V +E+ + Sbjct: 501 VLWPDELEGWARRV 514 >gi|240850068|ref|YP_002971461.1| protease SohB [Bartonella grahamii as4aup] gi|240267191|gb|ACS50779.1| protease SohB [Bartonella grahamii as4aup] Length = 282 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 117/268 (43%), Gaps = 18/268 (6%) Query: 38 VARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + ++G I DS I R +E+ + A+ + ++SPGGS IF Sbjct: 19 IPVVRLQGAIMDSSASISRTLSLSRCANLLEKAFAHKKSPAVALIINSPGGSPVQSRFIF 78 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + K V+ + ++AAS GY+I+CA + I A +S+VGSIGV+ L Sbjct: 79 KRIRDLAEEKNKKVLVFIEDIAASGGYMIACAGDEIFADPSSIVGSIGVVSASFGFPELL 138 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+G+ + + K PF ++ ++ + + F+ LV E R Sbjct: 139 KKIGIERRVYTAGKNKVTLDPFQPEKKADIEHLKSLQLEVHQTFIDLVKERRAEKLSDDS 198 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G W+G ++ ++GL+D + V + + + K++ PPK++ + Sbjct: 199 NLFTGMFWSGKQSVELGLVDGLNDVRSVIKERFG-----NDAKLRLIMPPKSFLGPKTPS 253 Query: 266 LSISSLLEDTI-PLMKQTKVQGLWAVWN 292 + + + + + + LW + Sbjct: 254 GVTAHTVYTVVDSALMAAEERALWQRYG 281 >gi|315927751|gb|EFV07078.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 298 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 2/275 (0%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + + +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I Sbjct: 11 LGYGIKFINTYFKTFVLLLIVIWILIPSANSSSNLANLERIDLKGEIFDSSAVLEKIINA 70 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N Sbjct: 71 KNDSNIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANK 130 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q Sbjct: 131 ILANPASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQG 190 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++D SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 191 LIDQSYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKL 250 Query: 241 G-VDQSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 V + K +D + N +L SL+E Sbjct: 251 ANVSNPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|242277502|ref|YP_002989631.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] gi|242120396|gb|ACS78092.1| signal peptide peptidase SppA, 36K type [Desulfovibrio salexigens DSM 2638] Length = 322 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 32/320 (10%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSP------------HVARIAIRGQIEDS-- 50 +KKI +L+ + L + + P V ++I G I D Sbjct: 1 MKKILLTIFILTSIALCGCQPKMNIFPDGTDPLLEKKLQGEGDYKVLVVSIDGTISDEGK 60 Query: 51 -----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-- 97 QE+ R++ + DD AL++ ++SPGGS A + ++ I + K + Sbjct: 61 RGLLGSSPSLVQEVSSRLKLAAEDDKIKALVLKINSPGGSVTASDILYNEIVRFKEKTGA 120 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 VI + ++AAS GY +S ++ I+A T+L GSIGV+F P V+ +DK+GVS++ KS Sbjct: 121 KVIVNMMDVAASGGYYVSLPADHIMAHPTTLTGSIGVIFIRPKVEGLMDKIGVSVEVSKS 180 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K PF P+ +++ D++ F LV + R+I D+ + ++++ Sbjct: 181 GRNKDMGFPFKPDTPEQKKIIDDIIKDYADRFQGLVKKHRSISDDQLNTIFTAQVFSAQG 240 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 AKK GL+D +G + ++ L ++ + K+Y L N + S + Sbjct: 241 AKKAGLVDSLGYLPDAVKTACKLAGISEDSQVVTYK-RKSYPNDTLYNSASSQAFSPALI 299 Query: 278 LMKQTKV----QGLWAVWNP 293 + + G +W P Sbjct: 300 NIDAGNLMPPKAGFHYLWLP 319 >gi|218962159|ref|YP_001741934.1| putative protease IV (signal peptide peptidase) [Candidatus Cloacamonas acidaminovorans] gi|167730816|emb|CAO81728.1| putative protease IV (signal peptide peptidase) [Candidatus Cloacamonas acidaminovorans] Length = 571 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 14/248 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-------DSQELIER------IERISRDDSATALIVSL 73 +S + +A + + G I SQ +I I++I + A+++ + Sbjct: 280 YSPTAKKKGDKIAVVYLNGNIAPVSGSNFGSQGIISEAKVKKIIKQIHQHKDIKAVVLRI 339 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +SPGGSA E I++ + K+K P++ + AAS GY ISCA + ++A +L GSIG Sbjct: 340 NSPGGSALESELIYQQLLKLKREYPLVVSMGGTAASGGYYISCAGDYLIADPGTLTGSIG 399 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ P + K+GV +++K SP +P ++ ++ ++Y+ F + V Sbjct: 400 VIGLIPEMAGLGKKIGVRSQTLKYGKFAGALSPLEHYDPALIESLKRSSTATYNEFKQRV 459 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +R I + +++GRI++ +A LID +G ++ L S + ++ Sbjct: 460 MTARKISPENIEAVAEGRIFSAEDALTHKLIDEIGTLDKAIAKAAGLAKVTSYSSV-NFP 518 Query: 254 PPKNYWFC 261 ++YW Sbjct: 519 KKESYWEA 526 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 21/217 (9%) Query: 51 QELIERIERISRDDSATALIVS-----LSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVH 104 QE+ +I+ ++D+ +++ + P A E + AI K+ KPV+ Sbjct: 74 QEICAKIKLAAKDERIKGILLQPQMIMTNYP-----ALEEMSLAIGTFQKSGKPVLAFGE 128 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSI--GVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 YL++ ++ I ++ G GV + K LDKLG+ + ++S K Sbjct: 129 NF-TQGDYLLASCADKIYMEPSASAGLALQGVSANMLFYKEMLDKLGIKMHILQSGEYKG 187 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAE 217 PF +E++ + + + Y+ + LV+++R + + + + R + + Sbjct: 188 AGEPFSQTELSKGTRENIDAALYDIYNHLLSLVAQNRKLETTQVKDIFEKRDDFFLSAEK 247 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 AK++ LID ++E+ +SL + + KI +++P Sbjct: 248 AKELKLIDYAMSRDEMLKSLGL--EEDNFMKIANYSP 282 >gi|237738354|ref|ZP_04568835.1| protease IV [Fusobacterium mortiferum ATCC 9817] gi|229420234|gb|EEO35281.1| protease IV [Fusobacterium mortiferum ATCC 9817] Length = 572 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 24/257 (9%) Query: 27 WSSHVEDNSPHVARIAIRGQI------------EDSQELIERIERISRDDSATALIVSLS 74 + + + +A I G I +++ I++ ++ + +++ L+ Sbjct: 292 YQESILHSQNKIAIIYAEGNILLDGERGGIGNSITPEKINSEIDKALKNPNIKGIVLRLN 351 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA A I +Q+ KP+ + +AAS GY ++ A I A S+ GSIGV Sbjct: 352 SPGGSALASNLIHHKLQEANKIKPIYVSIGGVAASGGYYMASAGQKIFADNESITGSIGV 411 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + P + K+ V+++SVK S + N K + + Y+ F+ +V+ Sbjct: 412 VSLIPNFNELMKKIDVNVESVKKGEYSDLFSLTKDFNGKDREKIYASSVKVYNEFLDVVA 471 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI----- 249 + RN+ + ++ G++W G E K++ L+D +GG E SL S + Sbjct: 472 QGRNLNREYVHSIAQGKVWLGEEGKEIDLVDEIGGIENAISSLAKELKIDSYEVVEIVEK 531 Query: 250 -------KDWNPPKNYW 259 K + P K +W Sbjct: 532 EKLDVMLKQYIPFKTFW 548 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 29/223 (13%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIA----------------IR 44 F++K +++ ++ + Y S + V + I Sbjct: 23 FSFIIKFSLFLILIVGVIGAILKYSSKDETIVLKENSVVVVDLGKEYKEKLEGLPKFLIE 82 Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSA---YAGEAIFRAIQKVKN-RKPVI 100 G+I + L+ ++ I D+ +++ L + E + +++++ K V+ Sbjct: 83 GEI-NFYSLLTKLNSIKNDNKVKGVLLKLDN---MTLDRGQIEELSGKLEELRKNNKMVL 138 Query: 101 TEVHEMAASAGYLISCASNIIVAAET--SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 + M + Y ++ AS+ I+ T + V G + Y K DKLG+ + Sbjct: 139 AYANNMN-NRNYSLALASDKIIMPPTMSANVNITGYYNELAYYKGLADKLGIKFNVIHVG 197 Query: 159 PMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 K+ F++ ++ + + + + D Y+ F+ + E R I Sbjct: 198 DYKSYGENFTKNQMSQEYRENIIRLQDRIYNNFLNKIVEKRKI 240 >gi|271969371|ref|YP_003343567.1| signal peptide peptidase SppA, 67K type [Streptosporangium roseum DSM 43021] gi|270512546|gb|ACZ90824.1| signal peptide peptidase SppA, 67K type [Streptosporangium roseum DSM 43021] Length = 566 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 25/276 (9%) Query: 34 NSPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPGG 78 VA + G I S + + RD+ A++ + SPGG Sbjct: 275 GEETVALVHGNGAIRLGRSGRSPLGGGSAMGSDTVCAALRAARRDEHVKAVVFRVDSPGG 334 Query: 79 SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S A +AI+R + + KP++ + ++AAS GY++S A++ IVA +L GSIGV Sbjct: 335 SYVASDAIWREVVLTRKAGKPIVVSMGDLAASGGYMVSMAADAIVAQPGTLTGSIGVFGG 394 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L+K+GVS ++V S + + + +D Y FV V+E R Sbjct: 395 KAVIGGLLEKIGVSSETVGEGANAGMFSSTNAFSEAQWARVNAWLDRVYEDFVNKVAEGR 454 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + ++ L+ GR+WTGA+A GL+D +GG ++ + ++ + Sbjct: 455 GLSRERAHELAKGRVWTGADAHAHGLVDELGGLQDALALARRKAGLAADAPVRAY----- 509 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L+ L + ED + +++ W P Sbjct: 510 PRLSPLERLRPADSSEDRTAATARIRLEA----WGP 541 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 11/237 (4%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS-P 76 + L + S + P A +A+R +++ ++R +D ALIV + + P Sbjct: 22 LVLELDLTDGLSDGPPSDPLSALLAMRKT--SLTDVLSGLKRARKDSRVKALIVKIGTQP 79 Query: 77 GGSAYAGEAIFRAIQKVKNRKPV-ITEVHEMAASAG----YLISCASNIIVAAETSLVGS 131 G A + + +A+ + + + + Y + A + + VG Sbjct: 80 LGLAM-VQDLRQAVIEFRAAGKLTVAFAETFGEFGAGTVPYYLGSAFERVYLQPSGDVGL 138 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWF 189 GV + +++ L KLGV + + K + F++ + + M + +S Sbjct: 139 TGVAMEQRFLRGALGKLGVEYQMGQRHEYKTAANTFTQDHMTDPHRESMGRITESVTEQI 198 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 V V+E R + K L D + GAEA + GL+D + ++EV+ + D ++ Sbjct: 199 VAGVAEGRGLEPTKVRKLIDEGPFIGAEAVEAGLVDRMAYRDEVYDEVKQAVGDDAL 255 >gi|197106190|ref|YP_002131567.1| signal peptide peptidase SppA [Phenylobacterium zucineum HLK1] gi|196479610|gb|ACG79138.1| signal peptide peptidase SppA [Phenylobacterium zucineum HLK1] Length = 590 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 18/263 (6%) Query: 34 NSPHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSPG 77 S +A I G I S +L + I+R +R S A+++ ++SPG Sbjct: 292 GSDSIALIEAEGPILTGRDEGASPFVSNAAIYSDDLADAIQRATRAKSVKAIVLRVNSPG 351 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A E I A++ K + KPV+ + AAS GY I+ ++ IVA T+L GSIGV Sbjct: 352 GSDTASEQILDAVRAAKAKGKPVVVSMSSYAASGGYWIASEASAIVAQPTTLTGSIGVFG 411 Query: 137 QYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + L + GV ++ P + +D Y F+ V+ Sbjct: 412 GKFALGDALARFGVDVRQTDVGGPYTGAFNLAEPFTAPQRAAFSRWMDRIYANFLERVAR 471 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 RN+P ++ ++ GR+WTGA+A+++GL+D +GG + + AL + +I+ P Sbjct: 472 GRNLPPERVAEIARGRVWTGAQARELGLVDELGGFYQAVERAKALAGLEGEVQIRRMTPM 531 Query: 256 KNYWFCDLKNLSISSLLEDTIPL 278 ++ + + +S+ T+ Sbjct: 532 ESPLEALERAMGVSAASVRTLAA 554 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 10/210 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVIT-----EVHE 105 ++E + R D L+V L G + I +A+++ + KPVI Sbjct: 73 TIVETLRRAETDSHVKGLLVRLPEGGMEPGMADEIRQALKRFRASGKPVIAHSQGLYPGG 132 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + S Y++ AS + + + G+ + ++K F DK GV+ + + K + Sbjct: 133 VVTS-TYMVGAASGELWMQPGASLQVTGLATEDLFLKRFFDKYGVTPQYEQRQEYKNAVN 191 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 F S+ P+ + + S Y + + R + + +A ++ L Sbjct: 192 TFLYSDYTPEHREATLSWMTSVYGAGLAAAAADRKTDAAALQRTLEAGPYVAEDALRLKL 251 Query: 224 IDVVGGQEEVWQS-LYALGVDQSIRKIKDW 252 ID VG E Q+ L G + + + +D+ Sbjct: 252 IDRVGQVREAEQALLAKAGDNAEMVEFRDY 281 >gi|319406065|emb|CBI79695.1| protease [Bartonella sp. AR 15-3] Length = 275 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 18/273 (6%) Query: 33 DNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYA 82 N+ + + ++G I S L+ R +++ A A+ + ++SPGGS Sbjct: 7 SNTVQIPVVRLQGAIISSNSLMSRTLSLARSASLLDKAFSYKKAPAVALIINSPGGSPVQ 66 Query: 83 GEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 IF+ I+ + N K V T V ++AAS GY+I+CA + I A +S+VGSIGV+ Sbjct: 67 SRLIFQRIRDLANEKNKQVFTFVEDVAASGGYMIACAGDEIFADPSSIVGSIGVVSASFG 126 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K+GV + + K PF V ++ + + F+ LV E R Sbjct: 127 FPELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKSLQLEVHQTFIDLVKERRMSK 186 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + G W+G + ++GLID +G V + + + K++ +PPK+ Sbjct: 187 LSDDPNIFTGMFWSGKKGVELGLIDELGDVRSVIKKRFG-----NNAKLRLISPPKSLLS 241 Query: 261 CDL-KNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + +S ++ +M + + LW + Sbjct: 242 SKVHLGISTDTIYTAVDGVMMAAEERVLWQRYG 274 >gi|296109597|ref|YP_003616546.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus infernus ME] gi|295434411|gb|ADG13582.1| signal peptide peptidase SppA, 36K type [Methanocaldococcus infernus ME] Length = 300 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 127/215 (59%), Gaps = 1/215 (0%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+ I ++++ +D S +++ ++SPGG A E + + +++V +KPV+ + + A Sbjct: 57 DANYYINLLDKLEKDKSVKGVLLIINSPGGEVVASEELAKKVKEVSEKKPVVAYIQTIGA 116 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S Y+++ +SN IVA S+VGSIGV + + KLG+++ ++K+ K SP+ Sbjct: 117 SGAYMVASSSNYIVAQRHSVVGSIGVRMDIIHFYGLMKKLGINVTTIKAGKYKDIGSPYR 176 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + P+ ++++ +++ +Y++F+ V+++RN+ + T +++G+I+ G +AKKVGL+D VG Sbjct: 177 PMTPEEKKILEKMINETYNYFIMWVAKNRNLSINYTKKIAEGKIYLGEDAKKVGLVDEVG 236 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 +E + L L + I+++ + F L Sbjct: 237 DEEVALKKLEELANVTN-PTIEEYGLSETSGFFGL 270 >gi|157164394|ref|YP_001467221.1| signal peptide peptidase SppA, 36K type [Campylobacter concisus 13826] gi|157101431|gb|EAT99328.2| signal peptide peptidase SppA, 36K type [Campylobacter concisus 13826] Length = 287 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 4/270 (1%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 + K I + L + + F+ S +++ P++ARI I G I D+ E+++ +E+ D Sbjct: 14 IFKFINNYFKALIFLLILFFIFAPDSKIKE--PNLARIDITGTIVDTSEILDELEKARLD 71 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 + +++ + SPGG+ + A++++K K V+ AS Y ++ I+A Sbjct: 72 SNIKGVLLYIDSPGGALSPSVELAMAVKRLKESKKVLAYAAGNMASGSYYAGVNADAIIA 131 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +GSIGV+ Q ++ LGVS + VK+ K + + + + +Q +V+ Sbjct: 132 NPGAFIGSIGVIMQGANIENLAKNLGVSEQVVKAGEFKEAGTFMRSWSKQERESLQGLVN 191 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +Y FV V+E+RN+ K ++ R++ A K+GLID +G + L + + Sbjct: 192 DAYMLFVSDVAEARNLDIKKKDEWANARVFLAHNALKMGLIDSLGSYIDAQNELAKMSLV 251 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 + P I+SL Sbjct: 252 DE--PVWQEKPQLEKIMEKFTKQGINSLFN 279 >gi|118594938|ref|ZP_01552285.1| Peptidase family U7 [Methylophilales bacterium HTCC2181] gi|118440716|gb|EAV47343.1| Peptidase family U7 [Methylophilales bacterium HTCC2181] Length = 318 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 16/272 (5%) Query: 8 IKTRYVMLS-LVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDSQ-----ELIERIERI 60 I +++ L L+ L +++ S A I +RG+I Q + ++ + Sbjct: 33 IFFKFLTLGYLIALLLIFVSGGDRGAVSTGEFTALINLRGEIGADQPVNGSDFRISLKEV 92 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCA 117 + ALI+S++SPGGS I IQ+ K + PV V ++ AS Y I+ A Sbjct: 93 YANPGTKALILSINSPGGSPVQSGMINDEIQRYKKKFPEIPVYAVVEDVCASGAYYIAVA 152 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL + + LG+ + + + KA PF ++PK Sbjct: 153 ADKIFVDKASIVGSIGVLIDGFGFEKAIATLGIERRLITAGENKAIMDPFLPIDPKQKLH 212 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++ + F+ +V R + G W+G +A ++GL D +G V + Sbjct: 213 IDAMLAEVHQQFINVVKRGRGDRLANNDDIFSGLFWSGEKAIQLGLADDMGDIYSVANEI 272 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 KI D+ +++ K L + Sbjct: 273 IG------YEKIVDFTSYESFADRFAKQLGMG 298 >gi|325660920|ref|ZP_08149547.1| hypothetical protein HMPREF0490_00279 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472427|gb|EGC75638.1| hypothetical protein HMPREF0490_00279 [Lachnospiraceae bacterium 4_1_37FAA] Length = 339 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 21/222 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSAT 67 ++ P++ +A+ G I++ ++ I+R+ D+ Sbjct: 54 ALLGGNTTTLPGEPYIGIVAVEGTIQEQTSSNGIFDTVAGYQHDTTLDYIDRMMEDEKNQ 113 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 +++ + SPGG+ Y E ++R + K +PV T + AAS GY IS S+ I A Sbjct: 114 GILLRVDSPGGTVYESEELYRKLVAYKEETGRPVWTYMEHYAASGGYYISAPSDKIYANP 173 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + GSIGV+ + +KLG+ S+ S K S++ + + + Q VD S Sbjct: 174 NTTTGSIGVIMSGYDMSGLYEKLGIRSVSITSGKNKDM----SKLTEEQIAIYQSSVDES 229 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + FV +V++ R + + ++DGR +T +AK GLID + Sbjct: 230 FDRFVEIVADGRKMTEETVREIADGRTYTAKQAKANGLIDEI 271 >gi|319892761|ref|YP_004149636.1| Protease IV [Staphylococcus pseudintermedius HKU10-03] gi|317162457|gb|ADV06000.1| Protease IV [Staphylococcus pseudintermedius HKU10-03] gi|323464206|gb|ADX76359.1| exfoliative toxin [Staphylococcus pseudintermedius ED99] Length = 330 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 17/266 (6%) Query: 32 EDNSPHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSP 76 D++ +A I + G+I D+ Q ++++E I DDS +++S++SP Sbjct: 50 GDSNKKIAEIVVEGEIIDTGASGGLFGGGAGYNHQAALKQLETIKNDDSIKGVLLSVNSP 109 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GG Y + ++ I++VK+ K + ++ +AAS GY IS ++ I A SL GSIGV+ Sbjct: 110 GGGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISAPADKIYAGPQSLTGSIGVI 169 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + LD LG+ ++KS K S ++ + +++Q + S+ FV +V E Sbjct: 170 SESKDYSELLDNLGIKTNTIKSGAHKDILSSSRKMTDEEREILQSINKDSFDQFVNVVKE 229 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + K L+DGRI++ +AK GLID +G + + + +I ++P Sbjct: 230 GRQMSESKVRELADGRIYSAQQAKSNGLIDAIGYK-DKTLKDLKKAIKVENPEIITFDPE 288 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQ 281 ++ L S + L + +K Sbjct: 289 ESNLTSFLGMKSFINGLRAELKDVKS 314 >gi|224825741|ref|ZP_03698845.1| peptidase S49 [Lutiella nitroferrum 2002] gi|224601965|gb|EEG08144.1| peptidase S49 [Lutiella nitroferrum 2002] Length = 312 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 18/275 (6%) Query: 7 KIKTRYVMLSLV--TLTVVYFSWSSHVED---NSPHVARIAIRGQIED----SQELIERI 57 KI R L ++ + ++++ + H A + ++G I+ +++LI + Sbjct: 30 KIFFRLAWLVIIGAAVFGLFYTKDEVPGERLIGDGHTATLQLKGVIDSDNDTAEKLITGL 89 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLI 114 RD + +I+ +SPGGS ++ I++ K P + V E+ AS Y I Sbjct: 90 NDAYRDKNTRGIIIQANSPGGSPVLSGMVYDEIRRQKKLHPAIPLYVVVEEVCASGCYYI 149 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I + S++GSIGVL ++KLGV + S KA PFS +NPK Sbjct: 150 AAAADKIFVDKASIIGSIGVLSDGFGFTGVMEKLGVERRLKTSGENKAMGDPFSPLNPKQ 209 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + Q ++D + F+ V + R L G IW G ++ +GL D G V Sbjct: 210 EAIRQQLLDDIHQQFISAVKDGRGARLHNDPELFSGLIWLGTKSIPLGLADGYGTVHSVA 269 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + + K D+ P + + L + Sbjct: 270 RDVI------KSEKTVDYTPEDTFPSRFARRLGVE 298 >gi|86149662|ref|ZP_01067892.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597632|ref|ZP_01100865.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 84-25] gi|218561753|ref|YP_002343532.1| protease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839930|gb|EAQ57189.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni CF93-6] gi|88189936|gb|EAQ93912.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 84-25] gi|112359459|emb|CAL34242.1| protease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925364|gb|ADC27716.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni IA3902] Length = 298 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 2/271 (0%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILIPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VD 243 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L V Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLANVS 254 Query: 244 QSIRKIKD-WNPPKNYWFCDLKNLSISSLLE 273 + K +D + N +L SL+E Sbjct: 255 NPVWKEEDKIDKFLNRLEGQTSSLISKSLIE 285 >gi|149920473|ref|ZP_01908941.1| SppA [Plesiocystis pacifica SIR-1] gi|149818654|gb|EDM78099.1| SppA [Plesiocystis pacifica SIR-1] Length = 683 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 20/283 (7%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIED--------------SQELIERIERISRDDSATAL 69 + + PHVA + G I D S +L+ ++RI+ DD+ A+ Sbjct: 360 FIGLAPPKRPTEPHVAIVYAVGNIIDGKGQGALGATSEIASGQLVPVLDRIAADDAVAAV 419 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++ + S GGSA A E I+ A++++K KPV+ + +AAS GY IS +N IVA ++ Sbjct: 420 VLRVDSGGGSALASEQIWHAVERLKANKPVVVSMAGVAASGGYYISAGANHIVAEPNTIT 479 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ + L + GV +VK SP + + ++ +Y F Sbjct: 480 GSIGVVGGKLAMGEALSRWGVETFTVKKGARANLWSPMDTWTEEERAAIYATMEETYEVF 539 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + V+ R++ D ++ GR+WTGA+AK+ GL+D +GG E LG + Sbjct: 540 LSRVAAGRSMDRDGVHAIAQGRVWTGADAKERGLVDELGGIEVALAKAAELGEVEGEPGY 599 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDT-----IPLMKQTKVQGL 287 + + P + L + ++ + +P+ Q + L Sbjct: 600 EVY-PGEPTLKDLLGSFGGAAGMAQASAGTRLPMSAQLMLDEL 641 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 109/274 (39%), Gaps = 27/274 (9%) Query: 28 SSHVEDNSPHVARIAIRGQIED-------------------SQELIERIERISRDDSATA 68 S + + PH+ + ++G + + ++ L++ ++ ++ +D Sbjct: 92 SDGFDADEPHLRVLTLKGSVAEVEGVDPLAMVLGGGGSTLQTRALLDELDELAAEDEVRG 151 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 LI+ + + G E + + + K + I E +A Y + A + + A Sbjct: 152 LILRVGNLGMDMARAEELRAGLLEFKATERSIYCHAETLDNASYYLLSACDELSMAPVGT 211 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSY 186 V G + ++K LDKLGV + K P + +P+ ++ ++ V+D ++ Sbjct: 212 VAIPGPIATPIHLKGLLDKLGVQPDFLHVGAFKGAAEPLTRDAPSPEMIETLEAVIDKAH 271 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 V ++ R ++ D ++T +AK+ GLID V +VW+ A D + Sbjct: 272 GTMVEGIASGRKRSPEEVSAWIDEALYTTEKAKQAGLIDRV----DVWERYLADATDAAG 327 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 P W S +L+D + L + Sbjct: 328 TDAGLETPL--GWKKASVGAEASDMLDDPMALQR 359 >gi|103487702|ref|YP_617263.1| signal peptide peptidase SppA, 67K type [Sphingopyxis alaskensis RB2256] gi|98977779|gb|ABF53930.1| signal peptide peptidase SppA, 67K type [Sphingopyxis alaskensis RB2256] Length = 661 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 10/248 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + +A + + G I D + + E I + D S A+++ + SPGGS A Sbjct: 340 AEKGSAIAVVPVVGDIVDGEAPTGLAGGTTIAEHILDAATDSSVKAIVLRVDSPGGSVLA 399 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I +A+ K RK PV+ + +AAS GY IS ++ I A ++ GSIGV P Sbjct: 400 SEEIRQALLAAKARKLPVVVSMANVAASGGYWISTPADRIFAEPETITGSIGVFGILPSF 459 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K+GV+ + ++P+ +P F VN + + Q V+ Y F LV++SR P Sbjct: 460 DRALAKIGVNADGIATTPLSGQPDIFGGVNEEFNALAQASVEDVYTRFTGLVAKSRKQPL 519 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 DK L +++GR+W G A+++GL+D GG E + L + + + + Sbjct: 520 DKILPIAEGRVWAGGTARQLGLVDQFGGLPEALAAAAKLAKVEGDFHARYFEEEPSELSR 579 Query: 262 DLKNLSIS 269 L N S + Sbjct: 580 LLANWSGA 587 Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 85/216 (39%), Gaps = 15/216 (6%) Query: 50 SQELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEM 106 +++++ +E + D T++++ L GG I AI KV+ +KPV+ Sbjct: 114 TRDVVHALETAASDKRITSVVLDLDRFLGGGQVS-LAEIGGAIDKVRAKKKPVLAFATAY 172 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 Y I+ ++ I A V G Y K +D+LG++ + K+ P Sbjct: 173 TTD-SYQIAAHASEIWADSIGGVAIAGPGGSRLYYKGLMDRLGITANIYRVGTFKSAVEP 231 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTG-----AE 217 + S+ +P+A + + ++ V ++R ++D G + Sbjct: 232 YLRSDQSPEAKEANLAYASVLWDNWLADVKKARPAAKLDAY-IADTVGAVRAAGNDLSKA 290 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + GL+D +G + + + + K ++N Sbjct: 291 SLDAGLVDRLGSRMAFSRRVAEISGATDEGKPWEFN 326 >gi|315929657|gb|EFV08835.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. jejuni 305] Length = 281 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 118/237 (49%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ N ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILIPSANSSSNLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +KPV+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKPVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERALDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLA 251 >gi|260890698|ref|ZP_05901961.1| protease IV [Leptotrichia hofstadii F0254] gi|260859576|gb|EEX74076.1| protease IV [Leptotrichia hofstadii F0254] Length = 510 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 20/279 (7%) Query: 32 EDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSA 80 + +A I G I +++++E+ + + +++ ++S GGSA Sbjct: 219 NPRNGTIAVIYAEGSILYDPNGVTEGVITPDNILQKVEKAMQTKNLKGIVLRVNSGGGSA 278 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A E I++ + K+ P+ + + AAS GY IS A N + A ++ GSIGV+ P Sbjct: 279 LASEIIYQELTKL--NIPIYVSMSDTAASGGYYISMAGNKVFANNATITGSIGVVSMIPK 336 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + DK GV SV F+ ++ ++ + ++ +Y F VS++R I Sbjct: 337 LYNAQDKYGVHSNSVSKGKYSDINDSFAPLSEESRAKITQSMEETYKEFKSRVSKNRKID 396 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY---ALGVDQSIRKIKDWN---- 253 + + G+IW G EAK + L+D + +EV + + L D ++ I Sbjct: 397 ENTLENYAQGKIWLGDEAKNINLVDGIASLDEVIKIMAKDLGLRKDYAVESIYLEEDFSQ 456 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 K++ + S+S+ L+ IP +K+ + +AV N Sbjct: 457 KLKSFTNMVTEKFSLSTQLQKNIPQVKKVFNEYDFAVQN 495 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 95/221 (42%), Gaps = 27/221 (12%) Query: 52 ELIERIERISRDDSATALIVSLSS---PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 ++++ ++ I + +I++L + P + E + + +++K K V Sbjct: 2 DILQSLDDIKNNSQVKGVIIALDTIDLP---SSKIEELSKKFEELKANNKKVYAF-GAYI 57 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEP 164 +A Y ++ +N +V ++ S+ + + Y K DKLG+S++ V+ K+ Sbjct: 58 TNANYKLAAIANEVVMVPSTSA-SLDLTGYHYSDIYYKGLFDKLGISMEVVRIGNYKSYG 116 Query: 165 SPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE----- 217 ++ E+ P+ + ++++ Y+ F+ +S++R I + I G + Sbjct: 117 ENYTGNEMTPELRSELTRILENRYNKFITDISKNRKIDKNTLNS----DIINGNDTSLTP 172 Query: 218 --AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 A+ L+D + + + L + ++ I D+ + Sbjct: 173 FAARDKNLVDKLEHFSDFTKRLNI--REDNVADITDYYEKR 211 >gi|116515107|ref|YP_802736.1| hypothetical protein BCc_171 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256961|gb|ABJ90643.1| protease IV, a signal peptide peptidase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 621 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 11/234 (4%) Query: 34 NSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 NS + I G IE++ + L+ I+ D S A+I+ ++SPGG+ E Sbjct: 327 NSNKIKVIISNGIIENNCKRSANLNIENLLNEIDEAKNDSSVKAVILRINSPGGTVKYSE 386 Query: 85 AIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + + ++ K KP+I + ++ AS GY IS A + I+A +T+L GSIG+ P ++ Sbjct: 387 IIRKKLLELHKCNKPLIISMGDVCASGGYWISTAGDYIIAHDTTLTGSIGIFAVIPTIEK 446 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L +G+ +K+ + S F E++ ++ + + D + Y F+ +V++SR + Y K Sbjct: 447 ILSTIGIKQYQIKT-KYYEDFSIFHELSEQSKKSIGDNIIREYKKFITIVAQSRKLSYKK 505 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 T +S GR+WTG +A+K+GL+D +G + + L ++ I K+ Sbjct: 506 THSISQGRVWTGYQAQKIGLVDEIGDLDHAIKKAAQLANIKNYCVIWSKLEKKS 559 Score = 53.6 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 68/279 (24%) Query: 4 VLKKIK-TRYVMLSLVTLTVVYFSWSSH----VEDNSPHVARIAIRGQI----------- 47 ++KKI +++L L ++ + ++N + I + + Sbjct: 21 LIKKIFLNIFILLFLSIFVLLIYEIKKKNIFFSKNNKSGILVIDLNQTLKEEPIRNISLY 80 Query: 48 ---------------EDSQELIERIERISRDDSATALIVSL-SSPGGSAYAG-----EAI 86 E+ ++IE+ D + ++ S + E Sbjct: 81 KHHNYFLNFFNWSNNSSVYEITKKIEQAKEDPKIKGIQLNFSDS-----FTSNQVILEYF 135 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVK 142 + + + K KP+I+ + S Y ++ SN I GS+ G+ ++K Sbjct: 136 GKKLYEFKQSNKPIISIGKNYSQSG-YYLASFSNKIFLLPD---GSVHINGIANTKIFLK 191 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV-----RLVSESR 197 +D L + + + K +P + +D F + ++ +R Sbjct: 192 KIIDTLKIHLHVFRIGKYKNAVESVLRNSP---SKINKKIDQLIIRFKWKKYLQKIASNR 248 Query: 198 NIPYDKT---LVLSDGRIW------TGAEAKKVGLIDVV 227 N + + + + A L+D + Sbjct: 249 NTVLTEICPNPNIFT-KFFKKKNNNYTKYALYHNLVDKI 286 >gi|325959637|ref|YP_004291103.1| signal peptide peptidase SppA, 36K type [Methanobacterium sp. AL-21] gi|325331069|gb|ADZ10131.1| signal peptide peptidase SppA, 36K type [Methanobacterium sp. AL-21] Length = 312 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVED--NSPHVARIAIRGQIEDS------------QELIERI 57 ++++L+ TV S+ + N VA I ++G+I + + + + Sbjct: 17 LLVIALLVATVSLLGGSNFLNSAPNGDTVAVIPLQGEIGYGSSGVSGETIVTPENVKDAL 76 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + D + +++++ ++SPGGS A E I AI + ++KPV+ + + AS YL + + Sbjct: 77 NQAESDGTVSSILIKINSPGGSPVASEEIMNAINE--SKKPVVVWIGDTGASGAYLAASS 134 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I+A+ +S+VGSIGV+ + + + G++ S+K+ K S + + M Sbjct: 135 ADDIIASPSSMVGSIGVIMGLTDLSKYYENNGINKYSIKAGEYKDMGSDYRNLTTNETNM 194 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q +V+ Y F+ +V+ +RN+ + T +++G+I+TG +AK + L++ GG+++ + Sbjct: 195 LQGMVNEDYAHFIDIVAVNRNLTVNYTQSIAEGKIYTGTQAKNLKLVNDTGGEKQALDAA 254 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 LG D NP + D+ N S+SS + +I L ++ Sbjct: 255 AKLGGITGSYNTIDINP--SSGLLDILN-SMSSRIAYSIGLGIGNNLK 299 >gi|115380005|ref|ZP_01467055.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|310820408|ref|YP_003952766.1| Signal peptide peptidase SppA, 36K type [Stigmatella aurantiaca DW4/3-1] gi|115362984|gb|EAU62169.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|309393480|gb|ADO70939.1| Signal peptide peptidase SppA, 36K type [Stigmatella aurantiaca DW4/3-1] Length = 828 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 126/270 (46%), Gaps = 18/270 (6%) Query: 37 HVARIAIRGQIED---------------SQELIERIERISRDDSATALIVSLSSPGGSAY 81 +A + + G I ++ + + R D + A+++ + S GG Sbjct: 534 RIAIVPVLGTIAGGKSREDPLGATRIAGAETVALALYRAQMDPAVVAIVLRVDSGGGDVL 593 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A + ++RA+ + K KPVI + ++AAS GY + A++ I A T+L GSIGV + P + Sbjct: 594 ASDLMYRAVLEAKKVKPVIASMGDVAASGGYYAAMAADEIFANPTTLTGSIGVFYLKPAL 653 Query: 142 KPFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 K L+ KLG++ +++ +P+ + P+ + +Q VD++Y F+ +E+R + Sbjct: 654 KGLLEDKLGITQQTLPRAPLADLLGLWRPWTPEEQRAVQAWVDATYDTFITYAAEARKLE 713 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR--KIKDWNPPKNY 258 + L+ GR+W+G +A GL+D +GG E + + G + ++ + + + Sbjct: 714 KAQVDTLARGRVWSGKDAHARGLVDRLGGLAEAVAAARSRGGASASEDVEVVVYGEARGF 773 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + + L +QGL Sbjct: 774 LSSLGGEPGVLARLLPEPSSPLPPGLQGLL 803 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 17/216 (7%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKV 93 SP +A + I G + L+ +E ++D+ +++ + GG + E + +A+ ++ Sbjct: 301 SPSLALLGISGP-DPYLRLMRFLELATQDERLRGVVLKVEGLGGVDWGRAEELRQAVLRL 359 Query: 94 KNR-KPVITEVHEMAASAGYLISCASNIIVAAETS---LVG-SIGVLFQYPYVKPFLDKL 148 + K V+ V GY ++ A++ + A S + G S GV V ++KL Sbjct: 360 RAAGKKVLALVLS-CDDKGYFVASAADRLYALPASSFLINGLSAGV----TSVGGTMEKL 414 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 GVS + K P +++ + + +D+ W+ + V R +P ++ Sbjct: 415 GVSWDVARVGEYKTAPEQLTRRDMSEAERETLNAWLDTQVDWYEQAVVSERKLPVERLRE 474 Query: 207 -LSDGRIWTGAEAKKVGLIDVV-GGQEEVWQSLYAL 240 G I A+ +GLID + GQ+E+ Q L L Sbjct: 475 AWKVGLI-PPPVAQSLGLIDGILQGQKELEQRLEQL 509 >gi|241667507|ref|ZP_04755085.1| S49 family peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876053|ref|ZP_05248763.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842074|gb|EET20488.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 307 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 113/254 (44%), Gaps = 16/254 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSA 80 S S ++ + H+ + + G I +++ + + ++ + + +I+ ++SPGGS Sbjct: 46 SLFSSSKELTSHIGLVKVDGVIVEDAEANAERINKSLDDAYSNKAVKGIIIEINSPGGSP 105 Query: 81 YAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I+ ++ ++ + P + + AS GY I+ + I A + ++VGSIGV+ Sbjct: 106 VQSDEIYSHMRYLQQKYPNIPMYAVCTNVCASGGYYIAAGAKEIYANKMTIVGSIGVIGS 165 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +DKLG+ ++ S K PFS P+ ++D ++ F+ V +SR Sbjct: 166 GFGFTGLMDKLGIERRTYTSGSNKDFLDPFSPERPEQTAQFNKLLDETHQVFITAVEQSR 225 Query: 198 N--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + G ++G +A+++GLID ++ + + + I D+ P Sbjct: 226 GDRLKDKAMDTTFSGEPFSGIQAQRMGLIDGFASVNQLKRDKF------NNLDIVDYTQP 279 Query: 256 KNYWFCDLKNLSIS 269 ++ L S Sbjct: 280 LDFLTAVSNKLGNS 293 >gi|290980063|ref|XP_002672752.1| predicted protein [Naegleria gruberi] gi|284086331|gb|EFC40008.1| predicted protein [Naegleria gruberi] Length = 660 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 16/271 (5%) Query: 38 VARIAIRGQI------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 VA I G I +S +++ I + +D +++ + SPGG A E Sbjct: 344 VAVIYASGAIVRGRPSNPRDTNMNSNVIVDAIYKARKDKEVKVILIRVDSPGGEVSASEV 403 Query: 86 IFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I R I+ + ++K V+ + +AAS GY IS + IV ++ GSIGV+ Y+ Sbjct: 404 IRREIELARTEDKKKVVISMGGLAASGGYWISLPGDKIVCNPFTITGSIGVIMGKLYLGD 463 Query: 144 FL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 F KLGV+ SV +S S F N + +++ ++ D Y F+ VSE RNI D Sbjct: 464 FFSKKLGVTNDSVSTSKNAGLLSQFERANDQQMEIFNNLADDFYDSFLEKVSERRNISKD 523 Query: 203 KTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ G+++ G AK + L+D VG + Q L ++ I ++P K Sbjct: 524 DLKNNIAKGKVYLGNSAKALNLVDSVGDFYDALQVAKELAGMKNEPHIVVFHPKKKSVIE 583 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 L N S ++ + + +++ Sbjct: 584 SLLNTQSPSNSKERALKSNVSIFEPFTSLYQ 614 Score = 93.3 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 84/199 (42%), Gaps = 18/199 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPG-------GSAYA-GEAIFRAIQKVKNRKPVITEV 103 I+ ++ +++ + LI+ L PG G A A + +A+ + K +K I Sbjct: 111 TFIQTLKAANQNPKISGLILYL--PGSSHNPFEGLALAHIYEMRKALFEFKGQK--IAHA 166 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSI--GVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 +S Y + A + I + L+ I G + + K LDK+ V VK + K Sbjct: 167 DMFNSSISYYFATACDKIFMTDNGLL--ILNGFQLRNFFFKQLLDKIEVEPFVVKRAEYK 224 Query: 162 AEPSPFSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 + +PF+E + ++ + + FV ++++R + D I+ ++ Sbjct: 225 SAMNPFTEEKYTEHHREQVETLAKELFDTFVSDIAQTREKNAESVREWFDIGIFGPKDSV 284 Query: 220 KVGLIDVVGGQEEVWQSLY 238 + +ID V ++E+ + Sbjct: 285 EHKVIDGVKYRDELLGVMA 303 >gi|332703631|ref|ZP_08423719.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] gi|332553780|gb|EGJ50824.1| signal peptide peptidase SppA, 36K type [Desulfovibrio africanus str. Walvis Bay] Length = 322 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 24/281 (8%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 P V I +RG +E QE + ++++ + D S AL++++ SPGG+A Sbjct: 42 EPKVVLITVRGTLETGPDEETFREAPGIVQETVSQLDKAAADPSVKALVLAVDSPGGTAT 101 Query: 82 AGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + ++ + K + ++ + E+AAS GY IS +++IVA T++ GS+G +F P Sbjct: 102 ASDILYGELLAWKEKTKAKLVVCMLEVAASGGYYISLPADVIVAHPTTITGSVGTIFIRP 161 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V +DK+GV + KS K SPF + + + V+M +V F+ LV++ RN+ Sbjct: 162 KVVGLMDKIGVDVDVTKSGVNKDMGSPFRQPSREEVEMFDGIVGDMNSRFLSLVAKHRNL 221 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP----- 254 + +S R++T +A+KVGL+D +G + + ++ + Sbjct: 222 SDENMRQVSTARVFTANQARKVGLVDEIGNIDFAVATARKQAGLPENARLVVYRRTEYAD 281 Query: 255 --PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P N + + L L+++ G + +W P Sbjct: 282 DNPYNSLLTRMASQPTLVDLGAAGDLLRRR--TGFYYLWEP 320 >gi|308231619|ref|ZP_07663897.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu001] gi|308369979|ref|ZP_07666834.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu002] gi|308216725|gb|EFO76124.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu001] gi|308325733|gb|EFP14584.1| signal peptide peptidase SppA, 36K type [Mycobacterium tuberculosis SUMu002] Length = 289 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 5/246 (2%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 + + ++ DDS +A+++ + SPGGS A E I+R + + ++R KPV+ + + Sbjct: 24 AGGDTIAAALREVAADDSVSAIVLRVDSPGGSVTASETIWREVARARDRGKPVVASMGAV 83 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY +S ++ IVA ++ GSIGV+ V+ D+LGV +V+++ S Sbjct: 84 AASGGYYVSMGADAIVANPGTITGSIGVITGKLVVRDLKDRLGVGSDAVRTNANADAWSI 143 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + P + D Y FV V+E R + D V++ GR+WTGA+A GL+D Sbjct: 144 DAPFTPDQQAHREAEADLFYSDFVERVAEGRKMTTDAVDVVARGRVWTGADALDRGLVDE 203 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK----NLSISSLLEDTIPLMKQT 282 +GG + L +++ + P + + ++ + ++ L D + + Sbjct: 204 LGGLRTAVRRAKVLAGLDEDTEVRIVSYPGSSLWDMVRPRPSSRPAAASLPDAMGALLAR 263 Query: 283 KVQGLW 288 + G+ Sbjct: 264 SIVGIV 269 >gi|153951329|ref|YP_001397333.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. doylei 269.97] gi|152938775|gb|ABS43516.1| signal peptide peptidase SppA, 36K type [Campylobacter jejuni subsp. doylei 269.97] Length = 298 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 116/237 (48%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 +K I T + L+ + + S++ ++ RI ++G+I DS ++E+I D Sbjct: 15 IKFINTYFKTFVLLLIVIWILVPSANSSSKLANLERIDLKGEIFDSSAVLEKIINAKNDS 74 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + ++ + SPGG+ + AI+ +K +K V+ AS YL +N I+A Sbjct: 75 NIKGVLFVIDSPGGAFAPSMELALAIKDLKIKKSVLVYASGTMASGSYLAGVGANKILAN 134 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 S +GSIGV+ Q + +KLG+ +++++ K+ + N +Q ++D Sbjct: 135 PASFIGSIGVIMQGADLSGLANKLGIKEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQ 194 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 SY F V++ R + +K ++ R++ A+AK++GLID + E + L L Sbjct: 195 SYDLFTGFVAKERVLDLNKKDQWANARVFLAAKAKELGLIDELSNYENAKKELEKLA 251 >gi|159043193|ref|YP_001531987.1| peptidase S49 [Dinoroseobacter shibae DFL 12] gi|157910953|gb|ABV92386.1| peptidase S49 [Dinoroseobacter shibae DFL 12] Length = 265 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 22/269 (8%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P VA + ++G I + Q + +ER A+ + ++SPGGS Sbjct: 9 KSDPTVAVVRLQGAIAATGRGMLNDQSVGPLLERAFTKGKPDAVALVINSPGGSPAQSSL 68 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ K PV V ++AAS GY I+ A++ I TS+VGSIGV+ Sbjct: 69 IGARIRRLAEEKEVPVYAFVEDVAASGGYWIAAAADEIWLDATSIVGSIGVISASFGFHE 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +++ G+ + + K+ PF P+ V+ ++ + + F ++ R + Sbjct: 129 LMERQGIERRVYTAGKDKSLLDPFRPERPEDVERLKGLQAQLHETFKGHITARRGAKLPE 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G +W G + VGL D +G V + + + + + P + L Sbjct: 189 DRDLYTGEVWIGQQGIDVGLADGIGHVAPVMKEKFG-----DKTRFRTYGPRR-----PL 238 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + S+++DT+ ++ +GLWA + Sbjct: 239 ISRFGFSVVDDTLHALEA---RGLWARYG 264 >gi|32490457|dbj|BAC79152.1| exfoliative toxin [Staphylococcus intermedius] gi|195972574|emb|CAR57917.1| exfoliative toxin [Staphylococcus pseudintermedius] Length = 330 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 17/266 (6%) Query: 32 EDNSPHVARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSP 76 D++ +A I + G+I D+ Q ++++E I DDS +++S++SP Sbjct: 50 GDSNKKIAEIVVEGEIIDTGASGGLFGGGAGYNHQAALKQLETIKNDDSIKGVLLSVNSP 109 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GG Y + ++ I++VK+ K + ++ +AAS GY IS ++ I A SL GSIGV+ Sbjct: 110 GGGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISAPADKIYAGPQSLTGSIGVI 169 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + LD LG+ ++KS K S ++ + +++Q + S+ FV +V E Sbjct: 170 SESKDYSELLDNLGIRTNTIKSGAHKDILSSSRKMTDEEREILQSINKDSFDQFVNVVKE 229 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + K L+DGRI++ +AK GLID +G + + + +I ++P Sbjct: 230 GRQMSESKVRELADGRIYSAQQAKSNGLIDAIGYK-DKTLKDLKKAIKVENPEIITFDPE 288 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQ 281 ++ L S + L + +K Sbjct: 289 ESNLTSFLGMKSFINGLRAELKDVKS 314 >gi|194335792|ref|YP_002017586.1| signal peptide peptidase SppA, 36K type [Pelodictyon phaeoclathratiforme BU-1] gi|194308269|gb|ACF42969.1| signal peptide peptidase SppA, 36K type [Pelodictyon phaeoclathratiforme BU-1] Length = 597 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 11/271 (4%) Query: 29 SHVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGG 78 ++ +A I + G I D + L ++ D + AL+V + SPGG Sbjct: 293 PQKGESDERIAVITMSGMIVHSAGEMGEGIDIEMLKNSLDAALEDKAVKALVVRIDSPGG 352 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A A + + + +KP++ + +AAS GY+ + A I A ++ GSIGV Sbjct: 353 DALASADMLQMLDSAAVKKPLVVSMSGVAASGGYMAALAGKTIFAQPLTITGSIGVYALK 412 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + +K+G+ V +PF + +A Y FV V+ SR Sbjct: 413 PNISGLAEKIGLGRDVVTRGQYADASTPFKPLEGQAYNKFVGASGEIYDDFVGKVAASRK 472 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK-DWNPPKN 257 + ++ GR+WTG+ A K GL+D +GG + + L +K++ P + Sbjct: 473 MSIAAVDSVAGGRVWTGSRAMKAGLVDRMGGLFDAIHAAQQLAKMDMGKKLQIILYPEQK 532 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 WF L +SL + +KQ + L Sbjct: 533 SWFESLLQGRSASLSDRFAAAVKQQVLHELL 563 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 37/248 (14%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------QELIERIERI 60 ++++ S V + + G I++ QEL+ + Sbjct: 25 IFAGLFWAHRSSQALPDRFVLVVPLSGGIDEVRNESSSLPFLPSHESLSLQELLFVLNHA 84 Query: 61 SRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISC 116 D+ +++ + G S + A++KV+ K V + A A YL++ Sbjct: 85 VADERVREVLLDIR---GIHTSPAKIAELRDAVEKVRKGGKKVTAFLRS-AEDADYLLAT 140 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKA 174 A N I+A + G+ + + L KLGV +++ + K+ PF + + + Sbjct: 141 ACNSIIAERGGFLLLDGLKVESLFYTSPLGKLGVQVQAAQWKKYKSGIEPFVRTGASKEY 200 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTGAEAKKVGLIDVVGG 229 ++ + ++D Y ++ VS+ R + + I + +A+ +GL+D + Sbjct: 201 LEQINALLDEFYDDYLGYVSKRRGMS----RSSFEALINNDPLVSAKKAQTLGLVDGIAS 256 Query: 230 QEEVWQSL 237 E+ + L Sbjct: 257 FWELQRQL 264 >gi|49473968|ref|YP_032010.1| protease sohB [Bartonella quintana str. Toulouse] gi|49239471|emb|CAF25822.1| Protease sohB [Bartonella quintana str. Toulouse] Length = 283 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 18/268 (6%) Query: 38 VARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I DS ++ R +++ A A+ + ++SPGGS +F Sbjct: 20 IPVVRLHGAIMDSNSMLARTLSLGRCASLLDKAFAYKKAPAVALIINSPGGSPVQSRLLF 79 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + K V + ++AAS GY+I+CA + I A +S++GSIGV+ FL Sbjct: 80 KRIRDLAEEKNKKVFVFIEDIAASGGYMIACAGDEIFADPSSIIGSIGVVSASFGFPEFL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF ++ ++ + + F+ LV E R Sbjct: 140 KKIGVERRVYTAGKNKVTLDPFQPEKKADIEHLKSLQLEVHQTFIDLVKERRATKLSNDS 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G W+G ++ ++GLID + V + + G K++ PPK+ + Sbjct: 200 DLFTGMFWSGRKSVELGLIDGLNDIRSVIKERFGSG-----TKLRLITPPKSLLGPKTPS 254 Query: 266 LSISSLLEDTI-PLMKQTKVQGLWAVWN 292 ++ + + + + + LW + Sbjct: 255 GVTANAVYTAVDSALIAAQERTLWQRYG 282 >gi|167645285|ref|YP_001682948.1| signal peptide peptidase SppA, 67K type [Caulobacter sp. K31] gi|167347715|gb|ABZ70450.1| signal peptide peptidase SppA, 67K type [Caulobacter sp. K31] Length = 595 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 18/264 (6%) Query: 33 DNSPHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSP 76 P +A ++ G I S ++ + + D A++ +SSP Sbjct: 294 KTGPTIAVVSAEGAIMTGSGSGGSPFGGDSTIYSDQVSKALYDAIDDKDVKAIVFRVSSP 353 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS A E I A++ + KPV+ + AAS GY IS ++ IVA T+L GSIGV Sbjct: 354 GGSDTASEQILAAVKAARKAGKPVVVSMGTYAASGGYWISSGASAIVAEPTTLTGSIGVF 413 Query: 136 FQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L + GV + V P +D Y FV V+ Sbjct: 414 GGKFALGEALARFGVDTRQVHVGGDYAGAFGTGEGFTPDQRAKFSAWMDRIYAGFVGRVA 473 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R++P ++ ++ GR+WTG +AK++GL+D +GG E + +L + K+K Sbjct: 474 EGRHLPPERVREIAKGRVWTGVQAKQLGLVDELGGFYEAVEKAKSLAGLKGEVKLKKIGA 533 Query: 255 PKNYWFCDLKNLSISSLLEDTIPL 278 + + K L +SS T+ Sbjct: 534 SNSPFDALEKVLGVSSASMRTLAA 557 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 36/275 (13%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSP------HVARIAIRGQIEDSQE------------- 52 +V L L + V + P V ++ +RG + D + Sbjct: 12 FVGLVLFLVGVPFLLIVMAASATRPAPVPAHTVLQLDLRGGLSDQESQNPFAAFSGGGGQ 71 Query: 53 ----LIERIERISRDDSATALIVSLSSP-GGSAYAG-EAIFRAIQKVKN--RKPVITEVH 104 ++E + R D+ A++V L P GG A A + + A + + +KP+ Sbjct: 72 SVMSIVETLRRAETDEKVKAVLVRL--PEGGMAPASADELRLAFKHFRAVGKKPIFAHSQ 129 Query: 105 EMAASA----GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + S Y++ A++ S + ++G + + K F DK GV + + Sbjct: 130 GLYPSGLVTSTYMLGAAASEFWMQPDSSLQAVGAASEEMFFKRFFDKYGVKAEYEQRYEY 189 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K +P+ S+ P + + S Y + ++ R + + + ++ EA Sbjct: 190 KNAVNPYLYSDYTPAHRESTLSWMGSVYTSALTTAAQDRKVDPAALVKTIEAGPYSAEEA 249 Query: 219 KKVGLIDVVGGQEEVWQS-LYALGVDQSIRKIKDW 252 K GLID VG +EV + L G + D+ Sbjct: 250 KAKGLIDRVGQVKEVQDAMLSRAGKGAKLIDFDDY 284 >gi|121602669|ref|YP_988704.1| S49 family peptidase [Bartonella bacilliformis KC583] gi|120614846|gb|ABM45447.1| peptidase, S49 family [Bartonella bacilliformis KC583] Length = 283 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 18/269 (6%) Query: 37 HVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ + + G I DS L+ R +++ D A A+ + ++SPGGS I Sbjct: 19 NIPVVRLHGAIMDSTSLMARTLSLSRCADLLDKAFSDKRAPAVALVINSPGGSPVQSRLI 78 Query: 87 FRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F+ I+ + + K V+ V ++AAS GY+I+CA + I A TS+VGSIGV+ Sbjct: 79 FQRIRDLADEKKKQVLVFVEDVAASGGYMIACAGDEIFADATSIVGSIGVVSASFGFPEL 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV + + K PF + ++ + + F+ LV E R Sbjct: 139 LKKIGVERRIYTAGKNKVILDPFQPEKKTGIDHLKSLQLEVHQTFIDLVKERRESKLSDD 198 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G WTG +GLID +G V + + K++ +P K+ Sbjct: 199 PDIFTGMFWTGKRGIGLGLIDGLGDVRSVVKERFG-----DKTKLRLISPSKSLLGPKTP 253 Query: 265 NLSISSLLEDTI-PLMKQTKVQGLWAVWN 292 + + ++ + L+ + + LW + Sbjct: 254 SGISADVVNMAVDSLLTVAEERALWQRYG 282 >gi|297583628|ref|YP_003699408.1| signal peptide peptidase SppA, 36K type [Bacillus selenitireducens MLS10] gi|297142085|gb|ADH98842.1| signal peptide peptidase SppA, 36K type [Bacillus selenitireducens MLS10] Length = 328 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 15/218 (6%) Query: 37 HVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I + G I+D ++ + ++E + +I+ +++PGG + Sbjct: 56 RIAVIQVEGMIQDGGAGGLFSVGYDHRQTLRQLEYAAESTDIYGVILQVNTPGGGVVESD 115 Query: 85 AIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I ++ KPV + AAS GY IS ++ I A + GSIGV+ Q V Sbjct: 116 ELHNRIVAIQEEFDKPVYAVMGGQAASGGYYISAPADKIYANAQTFTGSIGVIIQSLNVA 175 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPY 201 ++ GVS+++ S K SP EV +++ ++V SY FV +V R N+ Sbjct: 176 GLAEEWGVSLETFTSGEFKDILSPTKEVTDDERELLNEIVMDSYEQFVDVVDNGRENLSR 235 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D+ L+DGRI+TG +A + GL+D +G ++ + + Sbjct: 236 DEVYELADGRIFTGNQAVENGLVDEIGNRDAAIEDMIE 273 >gi|304322140|ref|YP_003855783.1| protease IV, a signal peptide peptidase [Parvularcula bermudensis HTCC2503] gi|303301042|gb|ADM10641.1| protease IV, a signal peptide peptidase [Parvularcula bermudensis HTCC2503] Length = 643 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 13/250 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGS 79 S D +A + + G I D E + ++R A+++ + SPGGS Sbjct: 337 SDPHDKDDKIAVVTVAGAIVDGDERSGAAGGDAVALELKRARTRKDVKAVVLRVDSPGGS 396 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A E I + VK KPVI + +AAS GY IS ++ I ++ ++ GSIGV + Sbjct: 397 VFASEVIRDEVLAVKAAGKPVIVSMGSLAASGGYWISANADEIWSSPVTITGSIGVFSFF 456 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P + ++G+S V ++P+ + + +++Q V+ Y F+ LV+E R Sbjct: 457 PTFEESFAEIGISTDGVGTTPLTGIYATGVGPLPEAYGEIIQASVEEIYGRFLGLVAEGR 516 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPP 255 + D ++ GR+W+G +A+++GL+D +G ++ S D ++ + P Sbjct: 517 EMTPDGVDSIAQGRVWSGLDAQRLGLVDRLGTLDDALASAAEKAGLEDYAVIGLTRERTP 576 Query: 256 KNYWFCDLKN 265 + L Sbjct: 577 FERFLEGLAG 586 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 81/216 (37%), Gaps = 14/216 (6%) Query: 52 ELIERIERISRDDSATALIVSLSS---PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +L+ + + DD +++ L P GSA + ++KV+ + + + Sbjct: 108 DLVAVLRSAAEDDRINVVVLDLQGLFIPSGSASKAHYLADEVEKVRAAGKQVIAIGDYYT 167 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 YL++ A++ I+ + +V G Y+ L+KL V+ + KA PF Sbjct: 168 QEQYLVAAAADEILLHDFGMVAIEGYGAYNTYLAEALEKLKVTAHVFRVGTFKAAVEPFL 227 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI---------WTGAE 217 ++++ +A + + + + V R++ + + Sbjct: 228 RNDMSAEAKEANIAYLSDLWSAYADKVDARRDVTVSGGVKEYAAQFPALMRAAGNNAAKA 287 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 A + GL+D + + + ++ ++K + Sbjct: 288 ALEAGLVDQLMDRPSQIAHIASIVGRDEKSELKGFR 323 >gi|302531492|ref|ZP_07283834.1| signal peptide peptidase SppA [Streptomyces sp. AA4] gi|302440387|gb|EFL12203.1| signal peptide peptidase SppA [Streptomyces sp. AA4] Length = 281 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%) Query: 32 EDNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 D VA + + G I + + + R D A+ + ++SPGG+ Sbjct: 18 GDRKDVVAVVKLHGVITPTPSPLARGAINLGAVESALTRAFAHDRLKAVALQINSPGGAP 77 Query: 81 YAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + I+++ + K PV+ ++AAS GY ++CA++ I A TS+VGSIGV+ Sbjct: 78 TQSGLVAERIRQLADEKGVPVLAFAEDVAASGGYWLACAADEIYAHRTSMVGSIGVISGG 137 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 L++ G+ + + K+ PFS P+ V+ ++++ + FV V E R Sbjct: 138 FGFTGLLERFGIERRLHTAGANKSRLDPFSPEKPEDVEWLKNMHGQLHELFVEWVKERRG 197 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + L G +W G +A +GL+D +G E+ + Y Sbjct: 198 DRLTDSADLFTGDVWLGQKAVDLGLVDGLGSLREIVRERY 237 >gi|91784726|ref|YP_559932.1| family S49 unassigned peptidase [Burkholderia xenovorans LB400] gi|91688680|gb|ABE31880.1| Family S49 unassigned peptidase [Burkholderia xenovorans LB400] Length = 334 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 10/243 (4%) Query: 7 KIKTRYVMLSLVTLTV--VYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIER 59 +I R+V L ++ L + V H A + + G+I +++++ +E Sbjct: 50 RIFFRFVFLVILLLAIWAAIDFSGDKVAATGRHTAMVTLDGEISADTNANAEDINTALES 109 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D +I+ +SPGGS I+ I++++ + P + V +M AS GY + Sbjct: 110 AFDDAGTAGVILRCNSPGGSPVQAGIIYDEIRRLRAKYPSVPLYAVVGDMCASGGYYAAA 169 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLG+ + S K PFS PK + Sbjct: 170 AADKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFFDPFSPETPKMDE 229 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 QD++D + F+ V + R +T + G WTG ++ ++GL D G + V + Sbjct: 230 HAQDMLDQIHAQFIDAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGFGDTDYVARD 289 Query: 237 LYA 239 L+ Sbjct: 290 LFK 292 >gi|328545804|ref|YP_004305913.1| Clp protease:peptidase U7:Signal peptide peptidase, SppA 36 kDa type [polymorphum gilvum SL003B-26A1] gi|326415544|gb|ADZ72607.1| Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Polymorphum gilvum SL003B-26A1] Length = 334 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 92/273 (33%), Positives = 149/273 (54%), Gaps = 12/273 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 S H+ARI I G I D ++ I I + + +IVS++SPGGS GEA++ A++ Sbjct: 47 TKRSAHIARIEIEGVILDDRDQRRMIAGIGKSRAVQGVIVSINSPGGSTTGGEALYEALR 106 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + +KP++ E+ + SAGY+++ A++ +VA S+ GSIGVLFQ+ ++ LD LGV+ Sbjct: 107 DLAGKKPMVAEIRTLGTSAGYMVALAADHVVARHNSITGSIGVLFQFGNIERLLDTLGVA 166 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +VKS P+KAEP +S+ +P A M++ +V SY WFVRLV+E R + ++DG Sbjct: 167 MDAVKSGPLKAEPDFYSQASPDARAMLEALVGESYDWFVRLVAERRGLDETAARRVADGS 226 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN----YWFCDLKNLS 267 I TG AK+ GL+D +GG++ L ++ + W + L Sbjct: 227 IVTGFRAKESGLVDELGGEQAAIAWLAREKGLKADLPVITWKAKTETGSVPFASKLFGSI 286 Query: 268 ISSLLEDTIPLMKQTK--------VQGLWAVWN 292 + L E + + K + GL +VW+ Sbjct: 287 GAGLAEGALDALSGAKGLISPSLTLDGLVSVWH 319 >gi|126740611|ref|ZP_01756298.1| peptidase, family S49 [Roseobacter sp. SK209-2-6] gi|126718412|gb|EBA15127.1| peptidase, family S49 [Roseobacter sp. SK209-2-6] Length = 265 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 14/233 (6%) Query: 36 PHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P V+ + + G I L +ER A+ + ++SPGGS I Sbjct: 12 PLVSVVRLNGAIGMPGRGSLSDAALAPVLERAFSKGKPAAVALEINSPGGSPVQSSLIGA 71 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 IQ++ K PVI V ++AAS GY ++ +++ I A +S+VGSIGV+ L+ Sbjct: 72 RIQRLAKEKNVPVIAFVEDVAASGGYWLAASADEIWADASSVVGSIGVISAGFGAHELLN 131 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + G+ + + K+ PF NP+ V ++ +++ + F+ V+E R D + Sbjct: 132 RHGIERRVYTAGESKSMLDPFRAENPEDVTRLKGLLEDIHQNFIDHVTERRGDKLDGSHK 191 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G +W A +GLID +G + + + V +I+ + K + Sbjct: 192 LFTGEVWLARRAVDLGLIDGIGHLQPALKQRFGDKV-----QIRRYGMKKPFL 239 >gi|326789880|ref|YP_004307701.1| signal peptide peptidase SppA, 36K type [Clostridium lentocellum DSM 5427] gi|326540644|gb|ADZ82503.1| signal peptide peptidase SppA, 36K type [Clostridium lentocellum DSM 5427] Length = 315 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 15/228 (6%) Query: 22 VVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE------LIERIERISRDDSATALIV 71 S + E P V I ++G I + + I RI + D + + Sbjct: 31 GAVISGLTGTESKMPRVGNVIDTIYVQGTIAEGEMNYNHAWTINRINELMYDKQNKGIFL 90 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++SPGG Y + ++ +++ K +PV + + AAS G + A++ I A ++ Sbjct: 91 YVNSPGGGIYESDELYLKLKEYKEVTERPVYAYMAQTAASGGLYVCMAADKIYANRMTMT 150 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ + LG+ +++ S KA +P + + Q++Q ++D SY+ F Sbjct: 151 GSIGVIMSMTDTTGLQELLGIKTENIVSGENKAMGNP---LTDEQRQILQTMIDESYNIF 207 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V +V+E+R++ K L+DGR+++ +AK +GLID VG E+ ++ Sbjct: 208 VDVVAENRSLTEAKVKELADGRVYSALQAKDLGLIDEVGSVEDAMHAM 255 >gi|322378926|ref|ZP_08053342.1| protease IV (PspA) [Helicobacter suis HS1] gi|321148668|gb|EFX43152.1| protease IV (PspA) [Helicobacter suis HS1] Length = 292 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 7/281 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +EF+ + K ++ + V + P++A++ + G I +S+ ++I +I Sbjct: 19 LEFITRYFKALVLL----LIVAVLLISTKGTTTQKPNLAKLYLYGPIFESESFQDQINKI 74 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 ++ S ++ + SPGG+ A + + + + PV+ V + AS Y ++ Sbjct: 75 LQNPSIKGALLMIDSPGGTISASVELSDMVASLAKKMPVVAYVRGVMASGSYYAGMMASK 134 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +L+GSIGV+F + P +DKLG+ + V K + E P+ Q + Sbjct: 135 IYANRGALIGSIGVIFSGVNIAPLMDKLGIKTQGVAKGAYKEVGTFMREWTPQEKQYLNG 194 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ Y FV V+++R++ T ++G+I++ +A + LID V +E ++L L Sbjct: 195 LLNEQYGMFVSDVAKARHLDPKDTPAFAEGKIFSAKQALFLKLIDRVSTYDEAIKALEHL 254 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 +++ K F D S S L + + Sbjct: 255 ---SAVKNPIWLQKDKLEIFMDKFFKSSSQALAQVLSYQMR 292 >gi|299141026|ref|ZP_07034164.1| signal peptide peptidase SppA, 67K type [Prevotella oris C735] gi|298577992|gb|EFI49860.1| signal peptide peptidase SppA, 67K type [Prevotella oris C735] Length = 588 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 17/254 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSATALIVS 72 + H+A G I D ++ +E +++DD A+++ Sbjct: 290 ADDTPVTGEHIAVYYAYGDIVDKASPQSIFQDDRQIVGNDMCRDLEDLAKDDDVKAVVIR 349 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++S GGSAYA E I+ I ++K KPV+ + AAS GY +S +N IVA T++ GSI Sbjct: 350 VNSGGGSAYASEQIWHQISELKKVKPVVVSMSGAAASGGYYLSSNANWIVADPTTITGSI 409 Query: 133 GVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 G+ + KL ++ VK++ + P+ + ++Q+ V+ Y F + Sbjct: 410 GIFGLFLDRSELYTKKLSINYAEVKTNRNSVFGASGHPFTPEQLSLLQNNVNRGYMLFKK 469 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V+E R + ++ ++ GR+W G + K+ L+D +GG ++ L + Sbjct: 470 RVAEGRKMTMEQVENIAQGRVWLGQDVIKLKLVDQLGGLDDAIAKAAKLAKMNDY-ETAS 528 Query: 252 WNPPKNYWFCDLKN 265 + P + W L + Sbjct: 529 YPSPLSTWEQLLGS 542 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 99/256 (38%), Gaps = 26/256 (10%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----------------LIER 56 + + L + S SS + V + + G + + +E ++ Sbjct: 24 FMGFMCLIGIIASSSSTTKIEDNSVLVLKLDGSMTEQEEENMMNSLQGISSLSFEGTMKA 83 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 I++ +D + + G E I +A+ + I E ++ GY ++ Sbjct: 84 IKKAKDNDKVAGIYLETGQFGADLAQAEEIEKALLDFRKSGKWIIAYGENYSTLGYYLAS 143 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKA 174 +N I + ++ G+ + Y K L K+G+ + K K+ + ++ Sbjct: 144 TANKIYLNKDGMIEWSGIGGEKVYYKNLLAKVGIKFVTTKVGKYKSAVEQLTADNISDAD 203 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA----KKVGLIDVVGGQ 230 + Q +D ++ + V+++R++ D +D R+ T EA +K L+D + Sbjct: 204 REQTQRYLDGWWNTILATVAKNRSLNKDSLNAYAD-RVIT-LEAPENMQKYKLVDGLIYN 261 Query: 231 EEVWQ-SLYALGVDQS 245 +++ LG+D+ Sbjct: 262 DQIADIVRKQLGIDKE 277 >gi|260890123|ref|ZP_05901386.1| hypothetical protein GCWU000323_01285 [Leptotrichia hofstadii F0254] gi|260860146|gb|EEX74646.1| signal peptide peptidase SppA, 36K type [Leptotrichia hofstadii F0254] Length = 262 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 123/258 (47%), Gaps = 11/258 (4%) Query: 41 IAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + + G I+ + + E++E + + L++ ++SPGGSA E I++ ++K Sbjct: 1 MNLEGVIDVKNPNKNITYENVCEKLEELKEIKNLKGLVLRINSPGGSALVSEKIYKKLKK 60 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + P+ + ++ AS GY I+ + A +L GSIGV+ YP V + KL +++ Sbjct: 61 L--TVPIYVSMGDVCASGGYYIATTGKKLFANNFTLTGSIGVVMMYPEVTGTMKKLDINL 118 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + +PF ++ + + + ++ Y F V +R + ++ ++ GR+ Sbjct: 119 EGFGKGAGFDMLNPFEKLGEDSKEKLIHNMNEVYGEFKEHVMVARGMNDEELEKIAQGRV 178 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 W G+EAK + L+D +G E+ +S+ L +D+ +I + D+K +S Sbjct: 179 WLGSEAKNINLVDEIGTLEDCIKSMANDLKLDKYKVQIVELTQTLKETLSDIKMPFVSEE 238 Query: 272 LEDTIPLMKQTKVQGLWA 289 + + + ++ Q L+ Sbjct: 239 IREKVEFLQGNINQVLYY 256 >gi|110681212|ref|YP_684219.1| S49 family peptidase putative [Roseobacter denitrificans OCh 114] gi|109457328|gb|ABG33533.1| peptidase, family S49, putative [Roseobacter denitrificans OCh 114] Length = 265 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%) Query: 35 SPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 P VA I + G I + + L IE+ A+ + ++SPGGS I Sbjct: 11 DPTVAVIRLSGVISAAGRGTLNDESLAPVIEKAFARGKPAAVALEVNSPGGSPVQSSLIG 70 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ K PVI V ++AAS GY ++ A++ I E+SLVGSIGV+ L Sbjct: 71 ARIRRLAEEKDIPVIAFVEDVAASGGYWLAAAADEIYGDESSLVGSIGVISASFGAHDLL 130 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + G+ + + K+ PF NP+ V ++ +++ + F V+ R Sbjct: 131 ARQGIERRVYTAGKSKSMLDPFRPENPEDVARLKGLLEDIHGNFKDHVAARRKGKLTDDR 190 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G +W A ++GLID +G + + + V K +++ K L Sbjct: 191 DLFTGEVWLARRAAELGLIDGIGHLKPMMTERFGEKV-----KFRNYGMRK-----PLLT 240 Query: 266 LSISSLLEDTIPLMKQTK 283 S +L+DT+ +++ Sbjct: 241 RFGSRILDDTLHSIEERS 258 >gi|163732838|ref|ZP_02140283.1| peptidase, family S49, putative [Roseobacter litoralis Och 149] gi|161394198|gb|EDQ18522.1| peptidase, family S49, putative [Roseobacter litoralis Och 149] Length = 265 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 19/260 (7%) Query: 33 DNSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P +A I + G I + + L IE+ A+ + ++SPGGS Sbjct: 9 KSDPTIAVIRLAGVISAAGRGTLNDESLAPAIEKAFSRGKPAAVALEVNSPGGSPVQSSL 68 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ K PVI V ++AAS GY ++ A++ I + E+S+VGSIGV+ Sbjct: 69 IGARIRRLAEEKGIPVIAFVEDVAASGGYWLAAAADEIYSDESSVVGSIGVISASFGAHE 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L + G+ + + K+ PF NP+ V ++ +++ + F VS R+ + Sbjct: 129 LLARQGIERRVYTAGKSKSMLDPFRPENPEDVARLKGLLEDIHGNFKDHVSARRSGKLPE 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G +W G A ++GLID +G + + + V K + + K L Sbjct: 189 DRDLFTGEVWLGRRAAELGLIDGIGHLKPMMIERFGDKV-----KFRSYGVRK-----PL 238 Query: 264 KNLSISSLLEDTIPLMKQTK 283 + S +L+DT+ +++ Sbjct: 239 LSRFGSRILDDTLHSIEERS 258 >gi|332297292|ref|YP_004439214.1| signal peptide peptidase SppA, 36K type [Treponema brennaborense DSM 12168] gi|332180395|gb|AEE16083.1| signal peptide peptidase SppA, 36K type [Treponema brennaborense DSM 12168] Length = 370 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 10/246 (4%) Query: 35 SPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++A ++I G IE D Q L++ I ++ D +++ + SPGG Y + ++ Sbjct: 88 KEYLAVVSIEGVIEEKNDTYDQQWLLDTIGALAADSKNVGILLYIDSPGGGVYQSDEVYL 147 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFL 145 + K K PV+ + +AAS GY I+CA++ ++A +L GSIGV+ Q + + Sbjct: 148 ELVKYKETTGNPVLAYLGPLAASGGYYIACAADYLIANRNTLTGSIGVISGQSVDLSALM 207 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DK G+ + + + K S + + +MQ + D Y F +V+ESR + ++ Sbjct: 208 DKYGIKMNTFTAGRNKDMLSINRPLTEEQRSIMQSIADECYDQFTGIVAESRGLDIEQVT 267 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP-KNYWFCDLK 264 L+DGR++T A+A + GLID + + L + + + P K + L Sbjct: 268 ALADGRVYTAAQALEHGLIDEIARYGDAVDILLNDVFENPALETVWFAPESKTSLYRYLM 327 Query: 265 NLSISS 270 N ++ Sbjct: 328 NARAAA 333 >gi|331085365|ref|ZP_08334451.1| hypothetical protein HMPREF0987_00754 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408148|gb|EGG87638.1| hypothetical protein HMPREF0987_00754 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 329 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 21/222 (9%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQE---------------LIERIERISRDDSAT 67 ++ P++ +A+ G I++ ++ I+R+ D+ Sbjct: 44 ALLGGNTTTLPGEPYIGIVAVEGTIQEQTSSDSIFDTVAGYQHDITLDYIDRMMEDEKNQ 103 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAE 125 +++ + SPGG+ Y E ++R + K +PV T + AAS GY IS S+ I A Sbjct: 104 GILLRVDSPGGTVYESEELYRKLVAYKEETGRPVWTYMEHYAASGGYYISAPSDKIYANP 163 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + GSIGV+ + +KLG+ S+ S K S++ + + + Q VD S Sbjct: 164 NTTTGSIGVIMSGYDMSGLYEKLGIRSVSITSGKNKDM----SKLTEEQIAIYQSSVDES 219 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + FV +V++ R + + ++DGR +T +AK GLID + Sbjct: 220 FDRFVEIVADGRKMTEETVREIADGRTYTAKQAKANGLIDEI 261 >gi|322380240|ref|ZP_08054461.1| protease IV (PspA) [Helicobacter suis HS5] gi|321147318|gb|EFX41997.1| protease IV (PspA) [Helicobacter suis HS5] Length = 292 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 127/281 (45%), Gaps = 7/281 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +EF+ + K ++ + V + P++A++ + G I +S+ ++I +I Sbjct: 19 LEFITRYFKALVLL----LIVAVLLISTKGTTTQKPNLAKLYLYGPIFESESFQDQINKI 74 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 ++ S ++ + SPGG+ A + + + + PV+ V + AS Y ++ Sbjct: 75 LQNPSIKGALLMIDSPGGTISASVELSDMVASLAKKMPVVAYVRGVMASGSYYAGMMASK 134 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +L+GSIGV+F + P +DKLG+ + V K + E P+ Q + Sbjct: 135 IYANRGALIGSIGVIFSGVNIAPLMDKLGIKTQGVAKGAYKEVGTFMREWTPQEKQYLNG 194 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ Y FV V+++R++ ++G+I++ +A + LID V +E ++L L Sbjct: 195 LLNEQYGMFVSDVAKARHLDPKDAPAFAEGKIFSAKQALFLKLIDRVSTYDEAIKALEHL 254 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 +++ K F D S S L + + Sbjct: 255 ---SAVKNPIWLQKDKLEIFMDKFFKSSSQALAQVLSYQMR 292 >gi|108757755|ref|YP_631990.1| signal peptide peptidase SppA [Myxococcus xanthus DK 1622] gi|108461635|gb|ABF86820.1| signal peptide peptidase SppA [Myxococcus xanthus DK 1622] Length = 605 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 10/246 (4%) Query: 35 SPHVARIAIRGQI----------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +P VA + + G I S+ +++ + RD + A++V +SSPGG+ A E Sbjct: 311 NPRVAVVPVSGIIIPGKGASGKMATSETVVKALRAAGRDKRSKAVVVYISSPGGTPLASE 370 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + A+Q+V +KPVI + + ASAGY+++ + I +A ++VGSIGV + Sbjct: 371 QMLEAVQRVARKKPVIAYMDRVCASAGYMVAVGAKEIWSAPHAMVGSIGVFAGKFDMSGL 430 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 ++KLGV + A S P+ ++ V+ Y F+ +V++ R ++ Sbjct: 431 MEKLGVHKTVLVRGQNAAMLSFSRGFTPQEEATLEAEVEEMYQAFLDIVAKGRGRTKEEI 490 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L++GR+++G K VGL+D V G EE + +L + + + +L Sbjct: 491 HQLAEGRVYSGVRGKAVGLVDQVAGFEEACRHALSLAKVPAAERFEIMTYGAPKQRVNLL 550 Query: 265 NLSISS 270 L + + Sbjct: 551 KLLMGA 556 Score = 79.4 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 74/186 (39%), Gaps = 8/186 (4%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEV 103 + + L E +E +++D +++ + A +A+ ++ + + + Sbjct: 82 VTSVERLRESLELLAKDGRVKGILLEVED---LAVPAAKRDALVAVLRAFRAQGKRVVGW 138 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 + GY + C+++ ++ V +G + + L ++G+ + ++ K Sbjct: 139 AVHVDNEGYALLCSADEVLLPPMGRVELVGYAAESTALGVGLSRVGIRPQFIRRGDYKTA 198 Query: 164 PSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 P F+ V+ + ++ +D Y + +V+ R ++ L D ++ A Sbjct: 199 PELFTRPVVSDIQTRTVESFLDERYADLLDVVARGRRKTPEEVRALIDQGPFSARRAVDA 258 Query: 222 GLIDVV 227 GL D + Sbjct: 259 GLADAL 264 >gi|319899201|ref|YP_004159294.1| protease [Bartonella clarridgeiae 73] gi|319403165|emb|CBI76724.1| protease [Bartonella clarridgeiae 73] Length = 282 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 20/274 (7%) Query: 33 DNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYA 82 N+ + + ++G I S L+ R +++ A + + ++SPGGS Sbjct: 14 SNTIQIPVVRLQGAIISSNSLMSRTLSLARCASLLDKAFSYKKAPVVALIINSPGGSPVQ 73 Query: 83 GEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 IF+ I+ + N K V T V ++AAS GY+I+CA + I A +S+VGSIGV+ Sbjct: 74 SHLIFQRIRDLANEKNKQVFTFVEDVAASGGYMIACAGDEIFADPSSIVGSIGVVSASFG 133 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K+GV + + K PF V ++ + + F+ LV E R Sbjct: 134 FPELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKSLQLEVHQTFIDLVKERRTSK 193 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + G W+G + ++GLID +G V + + + K++ +PPK+ Sbjct: 194 LSDDSNIFTGMFWSGQKGVELGLIDELGDVRSVIKKRFG-----NNAKLRLISPPKSLLS 248 Query: 261 CDLKNLSISSLLEDTI--PLMKQTKVQGLWAVWN 292 + L IS+ + T +M + Q LW + Sbjct: 249 SKVP-LGISADIAYTAVDGVMMAAEEQALWQRYG 281 >gi|332157800|ref|YP_004423079.1| protease IV [Pyrococcus sp. NA2] gi|331033263|gb|AEC51075.1| protease IV [Pyrococcus sp. NA2] Length = 329 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 128/260 (49%), Gaps = 13/260 (5%) Query: 1 MEFVLKKIKTRYVML-SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERI 57 ++ L+K+K+ L L+ S + + +A + I G I++ + ++I+RI Sbjct: 55 LKLQLQKLKSEVEFLRGLIA--------SMNESKGNISIAILPIFGPIDEELALKIIKRI 106 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 I + + +++ + SPGG I+ ++K+ + KP++ A S Y I+CA Sbjct: 107 REIRSNRTIGGVLLWIESPGGYVGPVREIYEELKKLSHLKPIVAYTGGYAYSGAYYIACA 166 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + I+A + VGSIGV++ + + + + G+ ++ K+ P K + + + P+ ++ Sbjct: 167 AQKIIADPLADVGSIGVIYVHFNAEKYYENNGIEVEVFKTGPYKDMGADWRGLTPEEREI 226 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +++ + + + F+ +VSE RN+ ++ + GR W + L+D +G + + L Sbjct: 227 IKNQIQTYFDDFISVVSEGRNMTIEEVKKFATGRTWFAKD-VNGTLVDELGDMDLAIREL 285 Query: 238 YA-LGVDQSIRKIKDWNPPK 256 +GV ++ + D K Sbjct: 286 LKIMGVKKANILVYDIEREK 305 >gi|20092840|ref|NP_618915.1| proteinase IV [Methanosarcina acetivorans C2A] gi|19918143|gb|AAM07395.1| proteinase IV [Methanosarcina acetivorans C2A] Length = 394 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 18/261 (6%) Query: 11 RYVMLSLVTLTVVYFS------WSSHVEDNSPHVARIAIRGQI-----------EDSQEL 53 V+L+L+ + V + S +A I ++G + S+E+ Sbjct: 94 FLVLLALIAVIAVSMAAIFYGLGFGGDFGTSEKIAVIYVQGSMLTGNVPSGLGYATSEEI 153 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGY 112 E I D++ A+++ ++SPGGS A + I I+K + + PV+ + ++AASA Y Sbjct: 154 SENIHSAVADENVKAIVLRINSPGGSPAAAQEISIEIEKAQEKGIPVVVSMGDLAASAAY 213 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 IS ++ I A ++ GSIGV++ + + + ++ GV KS K S + + Sbjct: 214 YISAPADYIYANPSTSTGSIGVIWTFENMSSYYEREGVEYYISKSGEFKDMGSSWRGLTD 273 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + VV SY FV V+E RN+ + L+DGRI+TG +AK++GL+D G + Sbjct: 274 EEKEYADSVVMESYDDFVGQVAEGRNMSRSEVKELADGRIYTGTKAKELGLVDGFGNLYD 333 Query: 233 VWQSLYALGVDQSIRKIKDWN 253 LG Q K+ N Sbjct: 334 AIDKAAELGSIQGEPKVVYMN 354 >gi|163867860|ref|YP_001609064.1| protease [Bartonella tribocorum CIP 105476] gi|161017511|emb|CAK01069.1| protease [Bartonella tribocorum CIP 105476] Length = 282 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 17/274 (6%) Query: 31 VEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAY 81 N + + ++G I DS + +E+ + + + ++SPGGS Sbjct: 13 FSSNKFEIPVVRLKGAIMDSSSISRTLSLSRCANLLEKAFAHKKSPVVALIINSPGGSPV 72 Query: 82 AGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 IF+ I+ + K V+ + ++AAS GY+I+CA + I A +S+VGSIGV+ Sbjct: 73 QSRFIFKRIRDLAEEKNKKVLVFIEDIAASGGYMIACAGDEIFADPSSIVGSIGVVSASF 132 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L K+GV + + K PF ++ ++ + + F+ LV E R Sbjct: 133 GFPELLKKIGVERRVYTAGKNKVTLDPFQPEKKADIEHLKSLQLEVHQTFIDLVKERRAT 192 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G W+G ++ ++GLID + V + + S K++ PPK++ Sbjct: 193 KLSDDSNLFTGMFWSGKKSVELGLIDGLNDVRSVIKERFG-----SDAKLRLITPPKSFL 247 Query: 260 FCDLKNLSISSLLEDTI-PLMKQTKVQGLWAVWN 292 + + + + + + + LW + Sbjct: 248 GFKAPSGVTAHTVYTAVDSALMAAEERALWQRYG 281 >gi|126433677|ref|YP_001069368.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. JLS] gi|126233477|gb|ABN96877.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. JLS] Length = 593 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 17/260 (6%) Query: 35 SPHVARIAIRGQI----------------EDSQELIERIERISRDDSATALIVSLSSPGG 78 P +A + + G I + + + D +A+++ + SPGG Sbjct: 299 KPTIAVVTLHGPIVSGRGGPGLSPLGNSSAGGDTIAAALREAAADKDVSAIVLRVESPGG 358 Query: 79 SAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S E I+R + + + PV+ + +AAS GY +S ++ IVA ++ GSIGV+ Sbjct: 359 SVTGSETIWREVLRTREGGTPVVASMGAVAASGGYYVSMGADAIVANPGTITGSIGVVTG 418 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + D+LGV SV+++ S S + ++ D Y FV V++ R Sbjct: 419 KLVARELKDRLGVGSDSVRTNANADAWSANSPFTDEQQAHVEAEADLFYTDFVERVADGR 478 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + D+ ++ GR+WTGA+AK GL+D +GG L + ++ P + Sbjct: 479 GLSVDEVAEVARGRVWTGADAKDRGLVDELGGLRTAIDRAKVLAGLEPDTDVRIVGYPAS 538 Query: 258 YWFCDLKNLSISSLLEDTIP 277 L+ S ++P Sbjct: 539 SLLDLLRPKQSSQPAAASLP 558 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 85/219 (38%), Gaps = 2/219 (0%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +A I+ G+ ++++ I R + DD LI + A + + AI +K Sbjct: 52 LAMISAGGRPMVLRQVVAAIHRAADDDRVAGLIARVQISAAPAAPVQELREAIAAFSAKK 111 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P + + Y ++ A + + VG +G +++ LDK G+ + Sbjct: 112 PSVAWAETYPGTLSYYLASAFREVWMQPSGTVGLVGFATSALFLRDALDKAGIQAQFTAR 171 Query: 158 SPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ + F+ + +++S + V+ESR + D L+D Sbjct: 172 GEYKSAANLFTQDSYTEPHREADSRLIESLNQQVLTAVAESRKLNPDDIDALADKAPLLR 231 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 A GL+D +G ++E + + L + + +P Sbjct: 232 DAAVDGGLVDRIGFRDEAYARVAELAGAEGVTPQNTDSP 270 >gi|167624533|ref|YP_001674827.1| putative periplasmic protease [Shewanella halifaxensis HAW-EB4] gi|167354555|gb|ABZ77168.1| Peptidase S49 domain protein [Shewanella halifaxensis HAW-EB4] Length = 342 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 10/216 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +VE+N P V + +G I+ S+ E I I I+ D +IV++ S GG + Sbjct: 88 DNVEENEPKVFVVDFKGSIDASEVASLREEISAILAIA--DKGDEVIVNVESGGGMVHGY 145 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ P+ V ++AAS GY+++C +N I +A ++VGSIGV+ Q P Sbjct: 146 GLASSQLDRLRQAEIPLSICVDKVAASGGYMMACVANKIYSAPFAIVGSIGVVAQVPNFN 205 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + K + F E + + Q ++ ++ F +++ R P Sbjct: 206 RLLKKHDIDYEQHTAGDFKRTLTIFGENTDEGREKFQKELEETHVLFKEFIAKYR--PDL 263 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ G W G +A ++GL+D + ++V L Sbjct: 264 DLDKVATGEHWYGQQAIELGLVDEISTSDDVIMKLA 299 >gi|170740974|ref|YP_001769629.1| peptidase S49 [Methylobacterium sp. 4-46] gi|168195248|gb|ACA17195.1| peptidase S49 [Methylobacterium sp. 4-46] Length = 287 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 11/256 (4%) Query: 36 PHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P VA + + G I L +ER A+ + ++SPGGSA I Sbjct: 22 PLVAVVRLSGPIGAVSPLRQGLSLGTCAPALERAFGLPGLKAVALVINSPGGSAAQSHLI 81 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ + K PV+ V ++AAS GY+I+CA++ IVA +SLVGSIGV+ + Sbjct: 82 HHRIRALAEEKKLPVLAFVEDVAASGGYMIACAADEIVADPSSLVGSIGVVSAGFGFQGL 141 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L++LGV + + P KA PF +P V ++ + F LV R + Sbjct: 142 LERLGVERRVHTTGPSKAMLDPFRPEDPADVARLKGIQADIQALFTDLVRARRPSLSGEP 201 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G +W+G +A +GL+D +G V ++ Y V+ + + Sbjct: 202 ADLFSGAVWSGRQALALGLVDALGDLRGVLRARYGDKVEIRVVEQVRGGLLARLLRRREP 261 Query: 265 NLSISSLLEDTIPLMK 280 +L+E + +++ Sbjct: 262 GAEGLALVEGALAVLE 277 >gi|159476306|ref|XP_001696252.1| signal peptide peptidase [Chlamydomonas reinhardtii] gi|158282477|gb|EDP08229.1| signal peptide peptidase [Chlamydomonas reinhardtii] Length = 744 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 17/238 (7%) Query: 31 VEDNSPHVARIAIRGQIE----------------DSQELIERIERISRDDSATALIVSLS 74 P VA + G I D+ +L ++ ++ D A++V ++ Sbjct: 400 ARKGQPKVAVVTAAGTIVQGPVPPTGPGANQQVIDATKLSAQLNQLLEDPDVRAVVVRVN 459 Query: 75 SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGGSA A ++I+ +Q+++ KPV+ + ++AAS GY I+ A++ +VA ++ GSIG Sbjct: 460 SPGGSALASDSIYHELQRLRAAGKPVVVSMGDVAASGGYYIAAAADAVVAQPGTVTGSIG 519 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ V L+ +GV + V SPF+ + P+ ++ +VD Y F+ V Sbjct: 520 VVAGKINVGRTLEDVGVRSEGVTVGRNADMLSPFTGLAPEQAAQVEALVDHVYDDFLDKV 579 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++SR P + L+ GR++TG +A +GL+D +GG E AL + + Sbjct: 580 AKSRGRPVSEVRQLAKGRVYTGQQAYDIGLVDQLGGLEAAVSRAKALAKLPEDVAVVE 637 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 67/215 (31%), Gaps = 42/215 (19%) Query: 52 ELIERIERISRDDSATALIVSL---SSPGGSAYAGEAIFRAIQKVK-------------- 94 +++ ++R + D L+ + + GG A + + AI + Sbjct: 102 KVVAALKRAAGDSRCRGLVTYVGARENLGGLAT-VQEVRDAISNFRLHLAAAAAGRGAGG 160 Query: 95 ------------NRKPVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPY 140 E S YL++ A + + + + + Sbjct: 161 GGGGGSSGSSFPAAVAFAASFGEAGGSGMVPYLLASACDRVYVQPSG--------GRAFF 212 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +P LD+L K+ + F E + + MQ ++ + ++ +R Sbjct: 213 ARPLLDRLRAEPYFFAREEFKSAANTFRESGLTEPQRENMQALLGDLAGQMMSAMAAARG 272 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 + + A A + GL+D ++EV Sbjct: 273 VDGAAVREAVEAAPLLPAAALRRGLLDGTKYKDEV 307 >gi|170748571|ref|YP_001754831.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] gi|170655093|gb|ACB24148.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] Length = 285 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 12/217 (5%) Query: 38 VARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA + + G I + +ER A+ + ++SPGGS I R Sbjct: 24 VAVVRLSGTIGAVSPIRPGLSIGSVAGSLERAFGMPGVKAVALVINSPGGSPAQSHLIHR 83 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ + + K PVI V ++AAS GY+I+CA++ IVA TS+VGSIGV+ L+ Sbjct: 84 RIRALADEKGVPVIAFVEDVAASGGYMIACAADEIVADPTSIVGSIGVVSAGFGFHGLLE 143 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLGV + K+ PF +P V+ ++ + F LV+ R + Sbjct: 144 KLGVERRVHTQGEAKSMLDPFRPEDPADVERLKRIQADVQDLFTGLVTARRP-TLSRAEN 202 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 L G +WTG +A +GL+D +G ++ + VD Sbjct: 203 LFTGAVWTGRQALPLGLVDALGDVRTAMRARFGDKVD 239 >gi|268678929|ref|YP_003303360.1| signal peptide peptidase SppA, 36K type [Sulfurospirillum deleyianum DSM 6946] gi|268616960|gb|ACZ11325.1| signal peptide peptidase SppA, 36K type [Sulfurospirillum deleyianum DSM 6946] Length = 286 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 119/238 (50%), Gaps = 2/238 (0%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 + I+ + + + L V+ F S E +P++A + + G+I + +E++E I++ D Sbjct: 15 IFTYIQNHFKAMLFLLLLVLIF--GSQDELKTPNLAIVKLEGEILNVEEILENIDKAQND 72 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 ++ +++ + SPGG+ + A++++ +KPV+ S Y S SN I+A Sbjct: 73 ENIKGVLLHVDSPGGALAPSIELSMAVKRLAEKKPVVAYAGGSMTSGSYYASIWSNYIIA 132 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + +GSIGVLFQ P V KLG+S + + + K + E K +++++D Sbjct: 133 NPGAFIGSIGVLFQAPNVAELAKKLGISEQVLSAGEYKQMGTFTREWTQKERGALKNLID 192 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +Y FV+ V+ +R + K ++ +++ ++A V LID +G + L Sbjct: 193 DAYDLFVKDVATARGLNLAKPDEFANAQVFIASKALNVHLIDEIGSLSSAKTKVEELA 250 >gi|240139855|ref|YP_002964332.1| protease SohB, belong to MEROPS peptidase family S49 (protease IV family, clan S-) [Methylobacterium extorquens AM1] gi|240009829|gb|ACS41055.1| protease SohB, belong to MEROPS peptidase family S49 (protease IV family, clan S-) [Methylobacterium extorquens AM1] Length = 286 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 19/271 (7%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + P VA + + G I + +ER +A+ + ++SPGGS Sbjct: 19 ETPPRVAVVRLSGAIGAVSPIRPGLSIGTVAPSLERAFTMPGLSAVALVINSPGGSPVQS 78 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I+R I+ + K V V + AAS GY+I+CA++ IVA SLVGSIGV+ Sbjct: 79 HLIYRRIRALAAEKEIKVFAFVEDAAASGGYMIACAADEIVADPASLVGSIGVVSAGFGF 138 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 ++++G+ + KA PF NP+ + ++++ F LV E R Sbjct: 139 DRLIERIGIERRVHTQGEAKAMLDPFRPENPQDIARLKEIQADVQALFSGLVRERRP-TL 197 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 D + L G +WTG +A +GL+D +G ++ Y VD ++ + W Sbjct: 198 DASRDLFTGAVWTGRQALDLGLVDALGDLRGTLRARYGEKVD-----LRLVAENRGSWLA 252 Query: 262 DLKNLSISSLLEDTIP--LMKQTKVQGLWAV 290 L + +P L+ + + WA Sbjct: 253 RLLRRAGPGQTAACLPDALIAAVEERAAWAR 283 >gi|254562274|ref|YP_003069369.1| protease SohB, belong to MEROPS peptidase family S49 [Methylobacterium extorquens DM4] gi|254269552|emb|CAX25518.1| protease SohB, belong to MEROPS peptidase family S49 (protease IV family, clan S-) [Methylobacterium extorquens DM4] Length = 286 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 19/271 (7%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + P VA + + G I + +ER +A+ + ++SPGGS Sbjct: 19 ETPPRVAVVRLSGAIGAVSPIRPGLSIGTVAPSLERAFTMPGLSAVALVINSPGGSPVQS 78 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I+R I+ + K V V + AAS GY+I+CA++ IVA SLVGSIGV+ Sbjct: 79 HLIYRRIRALAAEKEIKVFAFVEDAAASGGYMIACAADEIVADPASLVGSIGVVSAGFGF 138 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 ++++G+ + KA PF NP+ + ++++ F LV E R Sbjct: 139 DRLIERIGIDRRVHTQGEAKAMLDPFRPENPQDIARLKEIQADVQALFSGLVRERRP-TL 197 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 D + L G +WTG +A +GL+D +G ++ Y VD ++ + W Sbjct: 198 DASRDLFTGAVWTGRQALDLGLVDALGDLRGTLRARYGEKVD-----LRLVAENRGSWLA 252 Query: 262 DLKNLSISSLLEDTIP--LMKQTKVQGLWAV 290 L + +P L+ + + WA Sbjct: 253 RLLRRAGPGQTTAGLPDALIAAVEERAAWAR 283 >gi|260494226|ref|ZP_05814357.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] gi|260198372|gb|EEW95888.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] Length = 589 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + ++E ++ V I + G I +S+ E +E++ +D A+++ Sbjct: 303 YYKEENLESSNNVVYVIPLEGDIVESETEVFAGEENINVAETLEKLNIAKENDKIKAVVL 362 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I I+++ + KPV + +AAS GY IS ++ I ++ GS Sbjct: 363 RINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGGYYISANADKIFVDRNTITGS 422 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S + K + + Y F+ Sbjct: 423 IGVVSILPDFSKLITDNGVNIEKISEGEYSDLYSSDT-FTEKKYNKIYNSNLKVYDDFLN 481 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS++R I +K +++GRIWTG EA K+GL D +GG E + Sbjct: 482 VVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIGGLNEAIYGIAE 529 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 30/242 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ +E S DD +I+ ++ G S E + + + K +I + Sbjct: 95 TLLQSVENASYDDRVEGIILKMN---GDSLSYAQSEELAHELSMARAADKKIIAYFENVG 151 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV------KPFLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY K DK GV + K Sbjct: 152 RK-NYYLASYANEIYMPSANSTN----VNIYPYFREEFYIKKLADKFGVKFNIIHVGDYK 206 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S ++ +A + ++D +Y+ F+ +VS +R + D + DG + + Sbjct: 207 SYMENLASSTMSKEAREDTVRILDKNYNNFLDIVSLNRKLNRDDLDKIIKDGDLVAASSV 266 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + LID + + +G I I+D+ KNY+ + NL S+ + I Sbjct: 267 DLMNNKLIDKYAYWDNIISM---VGGKDKIITIQDYT--KNYYKEE--NLESSNNVVYVI 319 Query: 277 PL 278 PL Sbjct: 320 PL 321 >gi|256027690|ref|ZP_05441524.1| protease IV [Fusobacterium sp. D11] Length = 589 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + ++E ++ V I + G I +S+ E +E++ +D A+++ Sbjct: 303 YYKEENLESSNNVVYVIPLEGDIVESETEVFAGEENINVAETLEKLNIAKENDKIKAVVL 362 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I I+++ + KPV + +AAS GY IS ++ I ++ GS Sbjct: 363 RINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGGYYISANADKIFVDRNTITGS 422 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S + K + + Y F+ Sbjct: 423 IGVVSILPDFSKLITDNGVNIEKISEGEYSDLYSSDT-FTEKKYNKIYNSNLKVYDDFLN 481 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS++R I +K +++GRIWTG EA K+GL D +GG E + Sbjct: 482 VVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIGGLNEAIYGIAE 529 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 30/242 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ +E S DD +I+ ++ G S E + + + K +I + Sbjct: 95 TLLQSVENASYDDRVEGIILKMN---GDSLSYAQSEELAHELSMARAADKKIIAYFENVG 151 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV------KPFLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY K DK GV + K Sbjct: 152 RK-NYYLASYANEIYMPSANSTN----VNIYPYFREEFYIKKLADKFGVKFNIIHVGDYK 206 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S ++ +A + ++D +Y+ F+ +VS +R + D + DG + + Sbjct: 207 SYMENLASSTMSKEAREDTVRILDKNYNNFLDIVSLNRKLNRDDLDKIIKDGDLVAASSV 266 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + LID + + +G I I+D+ KNY+ + NL S+ + I Sbjct: 267 DLMNNKLIDKYAYWDNIISM---VGGKDKIITIQDYT--KNYYKEE--NLESSNNVVYVI 319 Query: 277 PL 278 PL Sbjct: 320 PL 321 >gi|197119483|ref|YP_002139910.1| peptidase S49 family peptidase [Geobacter bemidjiensis Bem] gi|197088843|gb|ACH40114.1| peptidase, S49 family [Geobacter bemidjiensis Bem] Length = 293 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 132/263 (50%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F ++L L + VV + V + ++G I D QE + ++ + + Sbjct: 7 FYGSLFIAGVLLLFLFCVGVVKVLLNDGDSLKGDGVGLVELKGLIVDGQETVRQLRELKK 66 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 D+ A+++ + SPGG + I+ A++ V K V+ + +AAS GY + + +I Sbjct: 67 DERVKAVVLRIDSPGGVVGPSQEIYAAVKGVAKVKKVVVSMGSVAASGGYYAAAPATLIY 126 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ GSIGVL ++ ++ +DK+G+ ++K+ K SP ++ + M+Q V+ Sbjct: 127 ANPGTITGSIGVLMKFSNIEGLMDKVGLKAFTIKTGKFKDVGSPVRTMSDEERGMLQGVI 186 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 DS++ F++ V+E R +P ++ ++DGRI++G +A L+D +G ++ + LG Sbjct: 187 DSTHQQFIKAVAEGRKLPVEQVRAIADGRIFSGEQALAAKLVDRIGTLQDAVEEAGRLGG 246 Query: 243 DQSIRKIKDWNPPKNYWFCDLKN 265 + ++ K+ F L Sbjct: 247 IKGEPELISPPRKKSRIFGALSE 269 >gi|23015704|ref|ZP_00055473.1| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 560 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 17/272 (6%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSAT 67 + ++ +A I+ G I +Q + E DD Sbjct: 282 LADYAGHLDKARGGAKIALISGIGAIHRGESRHGLDGDGDFGAQTVAEAFRDAVDDDKVK 341 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A++ + SPGGS A + + + + + KPV+ + AAS GY ++ ++ I+AA Sbjct: 342 AILFRVDSPGGSYTASDTVHHEVARARAAGKPVVVSMGNYAASGGYFVAMGADRIIAAPG 401 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV ++ F KLG+S ++ S P+A + ++D Y Sbjct: 402 TITGSIGVFTGKVVLEDFWKKLGISWDQMQRGDNAGIWSANQPFTPQAKARIDALLDHIY 461 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F S++RN+ + L+ GR+WTGA+AK+ GL+D +GG E L + ++ Sbjct: 462 ADFTGKASQARNLDAARMDKLARGRVWTGADAKESGLVDGLGGWTEALAQLRQVAGLKAD 521 Query: 247 RK--IKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + ++ P+ W ++L + E I Sbjct: 522 EPLSLVEFPRPRKPWEVLAESLGGGGVAERRI 553 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 11/204 (5%) Query: 51 QELIERIERISRDDSATALIVSL--SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ +E ++R + D T L ++ SS G + + A+ + + E Sbjct: 76 RQTVEALDRAALDSRVTGLFATMGHSSLG--LAGRQDLRDAVIRFRASGKSAVLFAETMG 133 Query: 109 SAG-----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G Y ++ A + + + VG G+ + P++K LD LG+ + K+ Sbjct: 134 EGGSGTLDYYLAAAFSQVWLQPSGDVGLTGLWVESPFIKGTLDLLGMKAQFSGRHEYKSA 193 Query: 164 PSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 F+E P + + ++DS + ++ +R +P D+ L + +EA Sbjct: 194 IDMFTETGFTPAHRENLGRLLDSWSEQIISGIAANRGLPEDRVRDLMGKGPFLASEALNA 253 Query: 222 GLIDVVGGQEEVWQSLYALGVDQS 245 L+D VG +++ W+ + +G D++ Sbjct: 254 KLVDKVGYRDQAWEIVAGIGTDKA 277 >gi|328873642|gb|EGG22009.1| hypothetical protein DFA_01898 [Dictyostelium fasciculatum] Length = 650 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 23/259 (8%) Query: 32 EDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPG 77 + + A I + G I S+ + + + D + A+++ ++SPG Sbjct: 306 QKSKHQFALINLEGAIYRGQSTDPMHGGPSIGSETVSLALRAATLDKNIKAIVLVVNSPG 365 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A + I I+ K K V+ + + AAS GY I+C ++ IVA ++ GSIGVL Sbjct: 366 GSYIASDLIHHEIELAKKAGKKVVVHMGQFAASGGYFIACNADRIVALPGTITGSIGVLA 425 Query: 137 QYPYVKPFLDKLGVSIKSV------KSSPM--KAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 KP +K+GV+ + K S N M D +D Y Sbjct: 426 GKFNTKPMWEKIGVTYDMINLNNNDKHGDNDNSTFYSALHPYNKVQRDAMNDFLDYIYGD 485 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F V+ R + + ++ GR+WTG +A L+D +G + L + K Sbjct: 486 FTSKVAAGRTLTAAQVEDVARGRVWTGNQALDRKLVDKIGSLNDAINEAKTLCGLKETDK 545 Query: 249 IKDWNPPKNYWFCDLKNLS 267 ++ PK L + Sbjct: 546 LQIVEFPKESLLKKLLSSG 564 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 92/230 (40%), Gaps = 24/230 (10%) Query: 52 ELIERIERISRDDSATALIVSLS-----SPGGSAYAGEAIFRAIQKVKNR-KPVITE--- 102 ++I I S D ALI LS S + + +AI + + K + Sbjct: 83 DIINYINHASGDAKVKALICRLSDKAHLS----LAMIQELRQAILNFRAKGKHTVVYSES 138 Query: 103 VHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 E++ S Y ++ A N I + VG + ++K LDKLG++ + K K Sbjct: 139 FGELSNSIGSYYLATAFNEIYIPQCGAVGLVSFSSDQSFIKKTLDKLGITAEFFKRKEYK 198 Query: 162 AEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 + P +E + + + ++ + + +++ RN+ D+ L + ++ +A Sbjct: 199 SAADPLTEEKLTDSNRESLTALLGDILNQMYQGIAKERNLGMDQLLNIISNGPYSSNKAV 258 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 ++ L++ E ++ L +K+++ + K K +S Sbjct: 259 ELNLVNGTKYLNETYEHLK--------KKMEEDHKKKPTLLYLTKYMSTK 300 >gi|253699780|ref|YP_003020969.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M21] gi|251774630|gb|ACT17211.1| signal peptide peptidase SppA, 36K type [Geobacter sp. M21] Length = 293 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 128/253 (50%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVS 72 ++L L + +V + V + ++G I D QE + ++ + +D A+++ Sbjct: 17 LLLFLACVGIVKALLNDGDSLKGDGVGLVELKGPIIDGQETVRQLRELKKDKRVKAVVLR 76 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I A++ V K V+ + +AAS GY + + +I A ++ GSI Sbjct: 77 IDSPGGVVGPSQEIHAAVKGVAKVKKVVVSMGSVAASGGYYAAAPATLIYANPGTITGSI 136 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL ++ ++ +DK+G+ ++K+ K SP ++ + M+Q V+DS++ F+R Sbjct: 137 GVLMKFSNIEGLMDKVGLKAFTIKTGKFKDVGSPARTMSDEERGMLQGVIDSTHQQFIRA 196 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R +P ++ ++DGRI++G +A L+D +G ++ + LG + ++ Sbjct: 197 VAEGRKLPVEQVRAIADGRIFSGEQALAAKLVDRIGTLQDAVEEAGRLGGVKGEPELIRP 256 Query: 253 NPPKNYWFCDLKN 265 K F L Sbjct: 257 PRKKTRIFGVLSE 269 >gi|182419438|ref|ZP_02950690.1| periplasmic serine protease [Clostridium butyricum 5521] gi|237666922|ref|ZP_04526907.1| signal peptide peptidase SppA, 36K type [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376769|gb|EDT74341.1| periplasmic serine protease [Clostridium butyricum 5521] gi|237658121|gb|EEP55676.1| signal peptide peptidase SppA, 36K type [Clostridium butyricum E4 str. BoNT E BL5262] Length = 331 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 18/274 (6%) Query: 34 NSPHVARIAIRGQIE---------------DSQELIERIERISRDDSATALIVSLSSPGG 78 + V + + G I+ + ++ + I+ + + +S +I+ ++SPGG Sbjct: 54 SEEFVGVVKVEGTIQSSSGSDSIFSTPQGYNHKKTLSYIDSMIKSNSNKGIILYVNSPGG 113 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 Y + ++ +++ K + +PV T + A S GY IS AS+ I A GSIGV+ Sbjct: 114 GVYESDELYLKLKEYKEKTGRPVWTYMSSRACSGGYYISMASDKIYANRNCWTGSIGVIT 173 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 VK DKLG+ + S P KA S E+ + ++Q +VD +Y F +V+E Sbjct: 174 SLVNVKGLYDKLGIEEIDITSGPNKAMGSSGREMTDEQRAILQSLVDEAYDQFAGIVAEG 233 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPP 255 R++ + ++DGR+++ +A ++GLID V + + + + +G D ++ + Sbjct: 234 RHMDIETVKPIADGRVYSANQALQLGLIDNVDTYDNMQKDMLDYIGSDVTVYTPEVQENV 293 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + F ++ + S + +++ GL Sbjct: 294 FSSLFSKVEGIKSKSDAQVISDYLEKAGNGGLMY 327 >gi|289765650|ref|ZP_06525028.1| protease IV [Fusobacterium sp. D11] gi|289717205|gb|EFD81217.1| protease IV [Fusobacterium sp. D11] Length = 578 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + ++E ++ V I + G I +S+ E +E++ +D A+++ Sbjct: 292 YYKEENLESSNNVVYVIPLEGDIVESETEVFAGEENINVAETLEKLNIAKENDKIKAVVL 351 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I I+++ + KPV + +AAS GY IS ++ I ++ GS Sbjct: 352 RINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGGYYISANADKIFVDRNTITGS 411 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S + K + + Y F+ Sbjct: 412 IGVVSILPDFSKLITDNGVNIEKISEGEYSDLYSSDT-FTEKKYNKIYNSNLKVYDDFLN 470 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS++R I +K +++GRIWTG EA K+GL D +GG E + Sbjct: 471 VVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIGGLNEAIYGIAE 518 Score = 82.1 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 30/242 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ +E S DD +I+ ++ G S E + + + K +I + Sbjct: 84 TLLQSVENASYDDRVEGIILKMN---GDSLSYAQSEELAHELSMARAADKKIIAYFENVG 140 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV------KPFLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY K DK GV + K Sbjct: 141 RK-NYYLASYANEIYMPSANSTN----VNIYPYFREEFYIKKLADKFGVKFNIIHVGDYK 195 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S ++ +A + ++D +Y+ F+ +VS +R + D + DG + + Sbjct: 196 SYMENLASSTMSKEAREDTVRILDKNYNNFLDIVSLNRKLNRDDLDKIIKDGDLVAASSV 255 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + LID + + +G I I+D+ KNY+ + NL S+ + I Sbjct: 256 DLMNNKLIDKYAYWDNIISM---VGGKDKIITIQDYT--KNYYKEE--NLESSNNVVYVI 308 Query: 277 PL 278 PL Sbjct: 309 PL 310 >gi|108762546|ref|YP_635601.1| signal peptide peptidase SppA, 67K type [Myxococcus xanthus DK 1622] gi|108466426|gb|ABF91611.1| signal peptide peptidase SppA, 67K type [Myxococcus xanthus DK 1622] Length = 680 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 17/260 (6%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIE---------------DSQELIERIERISRDDSATA 68 Y + + +A + G++ ++ + + + + D A Sbjct: 364 YLERAGKPNVSGNTIALVYGVGEVMRGKNQSNPLSGGQSMGAESVAAALRKATEDSRVKA 423 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 ++ + SPGGS A + + R +Q+ K KPVI + AAS GY ++ ++ IVA + Sbjct: 424 IVFRVDSPGGSYVASDTVRREVQRAKEAGKPVIVTMGSYAASGGYFVAMEADRIVAHPGT 483 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 L GSIGV F +KLGV+ SV + ++ P+ M +D Y Sbjct: 484 LTGSIGVYAGKFVTAGFWEKLGVNFDSVAAGKNAEMFGSDADYTPEQQARMDASLDRIYA 543 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F + SR +P +K L+ GR+WTG +A GL+D +GG + + + Sbjct: 544 DFTTRAAASRKLPLEKLQSLAKGRVWTGEDALAHGLVDALGGYPKALELAKEAAKLPADA 603 Query: 248 KI-KDWNPPKNYWFCDLKNL 266 ++ + P K L L Sbjct: 604 RVNVEVYPRKKPASALLSEL 623 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 81/200 (40%), Gaps = 8/200 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 ++++E +E+ D +L+V + P G+ A + + A++ + + K + Sbjct: 156 RDVVEALEKAGDDARVKSLLVRIGHP-GTPAATQELRDAVKAFRAKGKKAVAYSDSFGEL 214 Query: 110 A----GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 GY ++ A + I + V G+ F+ P+ + +LGV+ + K + Sbjct: 215 GNSTLGYYLASAFDEIYIQPSGDVNINGLAFELPFAREAFTRLGVTPRYFARYEYKNAIN 274 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 ++E + + +S + VR ++E R + D L D EA + L Sbjct: 275 SYTEQDFTAPHREATEGFTNSLFGQIVRGIAEDRGLTEDVVRGLIDKAPLMAQEAMEAKL 334 Query: 224 IDVVGGQEEVWQSLYALGVD 243 + + ++EV L + Sbjct: 335 VTGLRYRDEVLGGLKEQAGE 354 >gi|154148512|ref|YP_001406767.1| signal peptide peptidase SppA, 36K type [Campylobacter hominis ATCC BAA-381] gi|153804521|gb|ABS51528.1| signal peptide peptidase SppA, 36K type [Campylobacter hominis ATCC BAA-381] Length = 291 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 4/240 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F+ K K M+ L+ + +++F+ S E ++A I + I D+ +++E+I Sbjct: 15 LGFINKYFKA---MIFLLLVYLIFFTGQSD-EIEQANLAEIRLNDAIMDANDVLEKIYAS 70 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 S +++ A++ ++ SPGG+ I +AI+++ +KPVI AS YL + Sbjct: 71 SDNENIKAVLFNIDSPGGALSPSVEISKAIKELNEKKPVIVYASGTMASGSYLSGVWARK 130 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A E S +GSIGV+ Q ++ +K+G+S ++VK+ K + N + +Q+ Sbjct: 131 ILANEGSFIGSIGVIMQGANIENLANKIGISEQTVKAGEYKEAGTFMRAWNENERESLQN 190 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +VD SY +FV V+ +R++ D ++ R++ +A K+GL+D + + + Sbjct: 191 LVDKSYSFFVNEVANARHLNIDNNETWANARVFLADDALKLGLVDEISTYKRAKNETEKI 250 >gi|295698349|ref|YP_003603004.1| signal peptide peptidase SppA, 67K type [Candidatus Riesia pediculicola USDA] gi|291157055|gb|ADD79500.1| signal peptide peptidase SppA, 67K type [Candidatus Riesia pediculicola USDA] Length = 634 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 132/270 (48%), Gaps = 28/270 (10%) Query: 27 WSSHVEDNSPHVARIAIRG-------------QIEDSQELIERIERISRDDSATALIVSL 73 + D ++A I ++G I +S+ ++++I + D + +LI+ + Sbjct: 329 FLGKRNDFPSNIAVIFVQGMISGGNEENYENSSIANSENIVKKIRQAESDPNIRSLILRI 388 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +SPGG+ E I A++ + K V+ + MA S GY IS S+ I+A +T++ GSI Sbjct: 389 NSPGGTVSDSEKIRNALKSFRKNKKFVVVSMGGMATSGGYWISTESDRIIADQTTITGSI 448 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV + L+ +G+ + ++P+ P ++ +NP ++++ VD +Y F++ Sbjct: 449 GVFGVVNTFESSLEDIGIRCDGISTTPLSQGPIEYTGINPYLSEILKISVDHNYEKFLKY 508 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 VS SR +++GRIW G+EA KVGLID +G ++ ++ KI + Sbjct: 509 VSLSRKKNIQDVRTIANGRIWIGSEAFKVGLIDQLGDFDDAIEAAM---------KISNI 559 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 P W S +SL+E+ I L Sbjct: 560 EHPSLEWM-----FSDTSLMENLIDLFSSN 584 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 42/202 (20%) Query: 40 RIAIRGQIEDS-----------------------------QELIERIERISRDDSATALI 70 + + G I D E+I I ++D ++ Sbjct: 60 LLDLNGVILDHVPSESFLTSNNFNQKLFFSQDEIIRKNSLFEIIHSIREAAKDRKIKGMV 119 Query: 71 VSLSSPGGSAYAGEA-----IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAA 124 + L + I + +++ K KP+ + E + Y +S ++ I + Sbjct: 120 LKLD----HLIDADQPSLRYIGKCLKEFKKAGKPIF-SIGENYSQLQYYLSSFADKIYIS 174 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVV 182 + G+ Y K FL+KL + ++ K+ PF ++ ++ + + Sbjct: 175 NYGKIDIHGISNYRMYYKDFLEKLKIKSHIFRAGKYKSAVEPFMRNNMSHESKENHFSCL 234 Query: 183 DSSYHWFVRLVSESRNIPYDKT 204 + ++R VSE+RNI + Sbjct: 235 RKLWKDYLRTVSENRNIKINDV 256 >gi|194333353|ref|YP_002015213.1| signal peptide peptidase SppA, 36K type [Prosthecochloris aestuarii DSM 271] gi|194311171|gb|ACF45566.1| signal peptide peptidase SppA, 36K type [Prosthecochloris aestuarii DSM 271] Length = 596 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 31/283 (10%) Query: 34 NSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGS 79 +A I I G I D Q L E ++ ++S A+++ + SPGG Sbjct: 297 TKDGIAVITISGVIVQSAGDMPGGTEPGSDEQSLREALDAALDEESVKAIVLRIDSPGGD 356 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A + + + +KP++ + +AAS GY+ + A++ I A ++ GSIGV P Sbjct: 357 ALASANMLQMLDSANVQKPIVASMSGVAASGGYMAALAADSIFADPLTVTGSIGVYALKP 416 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 ++ +K+G+ + V + F ++ + Y F+ V+E R++ Sbjct: 417 NIQGLQEKIGLRREVVTRGKNADAYTLFKPLDEDGFAKFMETTGWIYDDFINKVAEHRDM 476 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWN----- 253 ++ ++ GRIW+G A GL+D GG E ++ + G+D S+ + Sbjct: 477 KPEEVDAVAGGRIWSGKAAVTAGLVDRTGGLREAVEAAQRMAGIDSSLAPTLKFYQGRKG 536 Query: 254 -----------PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 P + L SI++ DTI L+ + Q Sbjct: 537 MMDYILEGGVLTPGTLFGKKLPESSITARSLDTIDLLMHLERQ 579 Score = 72.1 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 109/268 (40%), Gaps = 35/268 (13%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------QEL 53 +++L L ++ ++ + + G+++++ Q+L Sbjct: 16 FIILFLAAGVGIFRMITARQSLPEKFALVVTLSGELKETADPQPPLPLLPDMRSLSLQDL 75 Query: 54 IERIERISRDDSATALIVSLS-----SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 I +E +D+ T +++ + S + AIQ+ +T A Sbjct: 76 IFLLEDAGKDERVTQVVLDIDAIRFAS-----AQIRQLQEAIQRTSASGTPVTGFLHAAG 130 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 ++ A + ++A + G+ + + L+K+GVS ++ + K+ P++ Sbjct: 131 DQDLWLASACDTLIAERGNQFLLDGLRAEMLFYAGTLEKIGVSFQAAQWKAWKSGIEPYT 190 Query: 169 EV--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLID 225 +P+ ++ + ++D Y + VS+ R I + + D + + + +A+++ L+D Sbjct: 191 RENASPEYLEQIGTMLDGIYDDYTAYVSQQRGISQEAYKNIIDEKTVVSAEQARQLRLVD 250 Query: 226 VVGGQ----EEVWQSLYALGVDQSIRKI 249 V G E + + L G++ S ++ Sbjct: 251 RVSGFWEYTENLKRELAPDGLEDSGDEL 278 >gi|167761166|ref|ZP_02433293.1| hypothetical protein CLOSCI_03571 [Clostridium scindens ATCC 35704] gi|167660832|gb|EDS04962.1| hypothetical protein CLOSCI_03571 [Clostridium scindens ATCC 35704] Length = 325 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 20/252 (7%) Query: 35 SPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 S ++A + + G I++ Q +E I+ + D + +++ + SPGG+ Sbjct: 53 SDYIAIVRVEGTIQEQASTGIFDIPEGYQHQTTMEYIDDLMEDSNNKGILLYVDSPGGTV 112 Query: 81 YAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y E ++ ++ K +PV + AAS GY++S AS+ I A ++ GSIGV+ Sbjct: 113 YESEELYLKLKDYKEATGRPVWDYMAHYAASGGYMVSMASDKIYANSNTVTGSIGVIMSG 172 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +KLG+ S+ S K S++ + + + Q+ VD Y+ FV +V+E R Sbjct: 173 FDMTGLYEKLGIRYFSITSGEYKDS----SQMTDEQMAIYQEQVDEYYNKFVSIVAEGRG 228 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + L+DGR +T +A GLID + E++ ++ + +++ + Sbjct: 229 MSEEAVRGLADGRTYTAEQAIDNGLIDSISSFEDMQAAMSEELGVNNYYELEGPSGVFAS 288 Query: 259 WFCDLKNLSISS 270 F +K+L S Sbjct: 289 LFAQVKDLIPKS 300 >gi|328675284|gb|AEB27959.1| Signal peptide peptidase SppA, 36K type [Francisella cf. novicida 3523] Length = 264 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 16/251 (6%) Query: 29 SHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 S ++ PH+A + + G I +++ + + ++ + + +IV ++SPGGS Sbjct: 6 SSSKELVPHIALVKVNGIIAEDAEANAERINKSLDDAYANKAVKGVIVEINSPGGSPVQS 65 Query: 84 EAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I+ +Q ++++ P + ++ AS GY I+ + I A + ++ GSIGV+ Sbjct: 66 DEIYSHMQYLQHKYPTIPMYAVCTDVCASGGYYIAAGAKDIYANKMTITGSIGVIGSRFG 125 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +DKLG+ + S K PFS + + ++D ++ F+ V +SR Sbjct: 126 FTGLMDKLGIERRIYTSGKNKDFLDPFSPQKSEQTAQFKKLLDETHQVFIAAVEKSRGDR 185 Query: 201 YDK--TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 G ++G +A+++GLID +++ + + I D+ P ++ Sbjct: 186 LKDKSMDTTFSGEPFSGIQAQQMGLIDGFASVDQIRNEKF------NNIDIVDYTRPLDF 239 Query: 259 WFCDLKNLSIS 269 L S Sbjct: 240 LTAVSHKLGNS 250 >gi|88811815|ref|ZP_01127068.1| protease IV [Nitrococcus mobilis Nb-231] gi|88790699|gb|EAR21813.1| protease IV [Nitrococcus mobilis Nb-231] Length = 614 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 10/212 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 S +D V I + G I D + + ++I RD ALI+ ++SP Sbjct: 309 SGGLQADDQPGKVGLITMEGPIADGESRPGIVGGDTIAQQIRDARRDHGIAALILRVNSP 368 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGSA A E + R + + KPV+ + +AAS GY + +N I A ++L GSIG+ Sbjct: 369 GGSATASEVVRREVAATRQAGKPVVVSMSAVAASGGYWAAMNANQIWAQASTLTGSIGIF 428 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 P V+ L+KLG+ V + + ++P+ +++Q V++ Y F+ V++ Sbjct: 429 GLLPNVQTTLEKLGIHPDGVGTHALTGALRADRPLSPEGARLVQLVIEQGYQRFIHRVAQ 488 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +R + + ++ GR+W+G +AK++GL+D + Sbjct: 489 ARGMSVEAVDRIAQGRVWSGRDAKRLGLVDHL 520 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 29/210 (13%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 ++L+ + R + D T ++ L G A + + AI+ + K VI Sbjct: 87 RDLLVALRRGASDSRITLAVLQLDELQQAGMA-QLQELGGAIRDFRASGKKVIAYAQSY- 144 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSVKSSPMKA 162 Y ++ ++ + VL Q Y + LD+LGV + + KA Sbjct: 145 TQLQYYLAALADKVYLDPLGA-----VLLQGFGVYQHYFRDALDELGVKVHVFRVGQYKA 199 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL--------VLS--DG 210 PF ++++P+A + + + + + V+ SR +P L+ DG Sbjct: 200 AVEPFMRNDMSPQARRENLIWLHTLWDVYKSDVAHSRGLPPSAIDRYIDNLPVELAAHDG 259 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 T A A+ GL+D + E+ L ++ Sbjct: 260 D--TAALARSAGLVDKLVTPAELRAELASI 287 >gi|163761019|ref|ZP_02168097.1| proteinase sohB [Hoeflea phototrophica DFL-43] gi|162281800|gb|EDQ32093.1| proteinase sohB [Hoeflea phototrophica DFL-43] Length = 285 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 21/271 (7%) Query: 38 VARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I + + R D A A+ + ++SPGGS I+ Sbjct: 19 IPVVRLSGAIMAGGNQFRQNLNLATAAPLLARAFADKQAPAVAIMINSPGGSPVQSRLIY 78 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + K V+ V ++AAS GY+I+CA + I+A +S+VGSIGV+ + Sbjct: 79 KRIRDLAEEKDKKVLMFVEDVAASGGYMIACAGDEIIADPSSVVGSIGVISAGFGFTGLI 138 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DK+GV + + K+ PF NP+ + ++++ + F+ LV +SR Sbjct: 139 DKIGVERRVYTAGENKSLLDPFKPENPEDIAYLKELQLDIHKVFIDLVKDSRGARLKDDP 198 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK- 264 + GR WTG K++GL+D +G ++ Y V K++ P + + + Sbjct: 199 DMFTGRFWTGQRGKELGLVDDLGDLRATLRARYGDKV-----KMRLIAPQRGLFGRKVPG 253 Query: 265 ---NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + ++L + + LW+ + Sbjct: 254 VATGFAANALAGVAEAGLNAIDERALWSRYG 284 >gi|148241743|ref|YP_001226900.1| periplasmic serine proteases (ClpP class) [Synechococcus sp. RCC307] gi|147850053|emb|CAK27547.1| Periplasmic serine proteases (ClpP class) [Synechococcus sp. RCC307] Length = 261 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 124/256 (48%), Gaps = 13/256 (5%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 I++ G I + + +++ + ++ L++ + SPGG+ + I +A+ +++ Sbjct: 16 ISLTGPIAGAARKRVVKALRQVEE-RKFPVLLLRIDSPGGTVGDSQEIHQALLRLRESGC 74 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+ ++AS G + CA++ IVA ++ GSIGV+ + ++ L+++G+ ++VKS Sbjct: 75 QVVASYGNISASGGVYVGCAADRIVANAGTITGSIGVILRGNNLEKLLERVGIRFETVKS 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K SP ++ ++Q ++DSSY FV V++ R + + +DGR+++GA+ Sbjct: 135 GLYKDILSPDKPLSEGERSILQALIDSSYSQFVAAVAQGRKLSEETVRTFADGRVFSGAQ 194 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 A ++G++D++G ++ + L + + L + Sbjct: 195 ALELGMVDLLGDEDTARREAARLAGLDE--------EKSQPVELGKERAGLVQKLRQELQ 246 Query: 278 LMKQTKVQGLWAVWNP 293 L Q LW ++ P Sbjct: 247 LQLAWGGQPLW-LFRP 261 >gi|21226968|ref|NP_632890.1| periplasmic serine protease [Methanosarcina mazei Go1] gi|20905282|gb|AAM30562.1| Periplasmic serine protease [Methanosarcina mazei Go1] Length = 410 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 15/262 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDN---SPHVARIAIRGQI-----------EDSQE 52 + +++++ +++ + N S +A I ++G + S+E Sbjct: 108 YLIVLLALIAVIAVSIAAIFYGLGFGGNIGSSDKIAVIYVQGTMLTGNVPAGLGYATSEE 167 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 + + I D++ A+++ ++S GGS A + I I+K + + PVI + ++AASA Sbjct: 168 ICQNIHSAVEDNNVRAIVLRVNSGGGSPSAAQEIAIEIEKAQKQGVPVIVSMGDLAASAA 227 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS ++ I A ++ GSIGV++ + + F G++ KS K + + Sbjct: 228 YYISAPADYIFANPSTNTGSIGVIWTFENMSGFYQNEGINYYVSKSGEFKDMGGTWRGLT 287 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + +VV SY FV V+E RNI + L+DGRI+TG+ AK +GL+D G Sbjct: 288 DEEKEYADEVVMESYEEFVTQVAEGRNISRSEVKKLADGRIYTGSRAKDLGLVDDFGNLY 347 Query: 232 EVWQSLYALGVDQSIRKIKDWN 253 + LG Q K+ N Sbjct: 348 DAIDKAAELGGVQGKPKVVYMN 369 >gi|331694042|ref|YP_004330281.1| peptidase S49 [Pseudonocardia dioxanivorans CB1190] gi|326948731|gb|AEA22428.1| peptidase S49 [Pseudonocardia dioxanivorans CB1190] Length = 293 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 17/269 (6%) Query: 38 VARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 V+ + + G I ++ + + +ER D A+ + ++SPGG+ I Sbjct: 27 VSLVRLHGVITPSSGPVPRAVLNAASVEKVLERAFSADGLVAVALQINSPGGAPTQSALI 86 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ + K PV+ ++AAS GY ++CA + I A TS+VGSIGV+ ++ Sbjct: 87 ADRIRGLAEEKEVPVLAFCEDVAASGGYWLACAGDEIYAHATSIVGSIGVISAGFGLQGL 146 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +++ GV + + K+ PF P+ V+ ++ + D + F V+E R + Sbjct: 147 IERFGVERRLYTAGRAKSRLDPFLPEKPEDVEWLRGLQDQLHEMFTMWVTERRGDRLNTE 206 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G +WTGA A + GLID +G V + D I ++ P Sbjct: 207 RDLFTGEVWTGARAVETGLIDGLGTPRSVLADRF---PDAEIVPVESRRPLLARLGIGAP 263 Query: 265 NLSIS-SLLEDTIPLMKQTKVQGLWAVWN 292 + + S + + + + +V+ LWA + Sbjct: 264 AAAATFSPVNSLLGIAEAAEVRALWARYG 292 >gi|237744193|ref|ZP_04574674.1| protease IV [Fusobacterium sp. 7_1] gi|229431422|gb|EEO41634.1| protease IV [Fusobacterium sp. 7_1] Length = 578 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + ++E ++ V I + G I +S+ E +E++ ++ A+++ Sbjct: 292 YYKEENLESSNNVVYVIPLEGDIVESETEVFAGEENINVAETLEKLNIAKENNKIKAVVL 351 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I I+++ + KPV + +AAS GY IS ++ I ++ GS Sbjct: 352 RINSPGGSALTSDIIAEKIKELASEKPVYVSMSSVAASGGYYISANADKIFVDRNTITGS 411 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S + K + + Y F+ Sbjct: 412 IGVVSILPDFSKLITDNGVNIEKISEGEYSDLYSSDT-FTEKKYNKIYNSNLKVYDDFLN 470 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS++R I +K +++GRIWTG EA K+GL D +GG E + Sbjct: 471 VVSKARKIDKEKLKTIAEGRIWTGEEAVKIGLADEIGGLNEAIYGIAE 518 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 30/242 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ +E S DD +I+ ++ G S E + + + K +I + Sbjct: 84 TLLQSVENASYDDRVEGIILKMN---GDSLSYAQSEELAHELSMARAADKKIIAYFENVG 140 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV------KPFLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY K DK GV + K Sbjct: 141 RK-NYYLASYANEIYMPSANSTN----VNIYPYFREEFYIKKLADKFGVKFNIIHVGDYK 195 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S ++ +A + ++D +Y+ F+ +VS +R + D + DG + + Sbjct: 196 SYMENLASSTMSKEAREDTVRILDKNYNNFLDIVSLNRKLNRDDLDKIIKDGDLVAASSV 255 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + LID + + +G I I+D+ KNY+ + NL S+ + I Sbjct: 256 DLMNNKLIDKYAYWDNIISM---VGGKDKIITIQDYT--KNYYKEE--NLESSNNVVYVI 308 Query: 277 PL 278 PL Sbjct: 309 PL 310 >gi|49475218|ref|YP_033259.1| protease sohB [Bartonella henselae str. Houston-1] gi|49238023|emb|CAF27229.1| Protease sohB [Bartonella henselae str. Houston-1] Length = 283 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 23/292 (7%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIER----------IERISRD 63 M++ + + + +SS E + + + G I DS I R +++ Sbjct: 1 MVNFIKNFIPHRFYSSKTE-----IPVVRLHGAIIDSSSSIARTLSLGRCANLLDKAFAY 55 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNII 121 A A+ V ++SPGGS IF+ I+ + K V+ + ++AAS GY+I+CA + I Sbjct: 56 KKAPAVAVIINSPGGSPVQSRLIFKRIRDLAEEKKKQVLMFIEDIAASGGYMIACAGDEI 115 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A +S+VGSIGV+ L K+G+ + + K PF ++ ++ + Sbjct: 116 FADPSSIVGSIGVVSASFGFPELLKKIGIERRVYTAGKNKVTLDPFQPEKKTDIEHLKSL 175 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F+ LV E R + G W+G ++ ++GLID + V + + Sbjct: 176 QLEVHKTFIDLVKERRAEKLSNDPNIFTGMFWSGKKSVELGLIDGLNDVRSVIKERFG-- 233 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI-PLMKQTKVQGLWAVWN 292 K++ PPK+ + + + + I + + + LW + Sbjct: 234 ---DDTKLRLIIPPKSLFGPKTPSGVTAHAVHTAIDSALMVAQERALWQYYG 282 >gi|261886139|ref|ZP_06010178.1| signal peptide peptidase SppA, 36K type [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 287 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 5/250 (2%) Query: 1 MEFVLKKIKTRYVML-----SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIE 55 ++F+ KI + + S V L +V + + ++ I+++G I D E++ Sbjct: 4 LKFIFSKIAAIFKFVNEYFKSFVFLLIVILIIVNSGKSEIANLTEISLKGAIIDESEILS 63 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +I D +++++ SPGGS I AI+ + + KPVI AS Y S Sbjct: 64 QIYEAKNDSFIKGVLLNIDSPGGSMAPSVQISDAIKDLASIKPVIAYASGTMASGSYYSS 123 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +N I A S +GSIGV+ Q P V+ KLGVS +++K+ K + N Sbjct: 124 IWANKIYANRGSFIGSIGVIVQSPNVEELAKKLGVSTQTIKAGKYKEAGTFIRGWNEDEK 183 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q +V+ SY F V+ +RN+ DK + ++ R++ +AK VGLID V EV Sbjct: 184 NELQSLVNRSYEMFYTDVAMARNLDIDKKDIWANARVFLAPDAKSVGLIDDVKSYFEVKS 243 Query: 236 SLYALGVDQS 245 L L S Sbjct: 244 ELELLSGVAS 253 >gi|223995779|ref|XP_002287563.1| hypothetical protein THAPSDRAFT_261589 [Thalassiosira pseudonana CCMP1335] gi|220976679|gb|EED95006.1| hypothetical protein THAPSDRAFT_261589 [Thalassiosira pseudonana CCMP1335] Length = 457 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 11/246 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSP 76 +L + + VA + + G I S E+I + +I +D L++ ++SP Sbjct: 216 SLVLSGLGIYPNDVSQGDKVAVVTVDGGIGRSLAYEIISSLRKIRKDKDVKCLVLRVNSP 275 Query: 77 GGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS + EAI ++ ++ PV+ + AAS GY IS + I A T+L GSIGV Sbjct: 276 GGSVVSSEAILEEVKALEIVSLPVVCSMANYAASGGYYISTNAERIFAQPTTLTGSIGVY 335 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS----YHWFVR 191 + G+ A P + + Q M+ +D + Y +F Sbjct: 336 GIKFDASQWAKSYGIRSDYYPHGSHGATVHPLTPLT----QSMKLNLDRTTLGYYDYFKS 391 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 +V++ R++ + ++ GR+WTG +AK+VGL+D +GG E + + +++ Sbjct: 392 IVAKGRSLSPQQVESIAQGRVWTGEQAKEVGLVDAIGGLERAISYVKSAHTTTEKVQVEY 451 Query: 252 WNPPKN 257 W + Sbjct: 452 WPKKSS 457 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 85/217 (39%), Gaps = 19/217 (8%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGS--AYAG---EAIFRAIQKVKNRK-PVIT 101 +++EL++ I++ + D + +A + G E I A++ P Sbjct: 1 MEAKELVDIIQKAADDKNISA--LYADFGEGMRYPVGYAHIEDIRNAVRIFNESHRPSYA 58 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY---VKPFLDKLGVSIKSVKSS 158 + S Y ++ A + + GS+ + ++ LDK GV K Sbjct: 59 FGYSFHWSE-YFLASAFSHVHLQSR---GSLDLFGATVNNLFLRSALDKYGVKAHVFKHG 114 Query: 159 PMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL--VLSDGRIWT 214 K P+ F+E + ++ ++ + S + + SR + +D + +SD T Sbjct: 115 DYKTAPNVFTEKVYSKPHLETVKSMTASLNNTIRTCIRNSRALNFDDVMWQSISDYGSLT 174 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 A+++GL+D + + L A D + K++ Sbjct: 175 AVNAEEIGLVDSTPSVDPLPSLLEANKSDDAKAKLEQ 211 >gi|146329644|ref|YP_001209888.1| SspA family peptidase [Dichelobacter nodosus VCS1703A] gi|146233114|gb|ABQ14092.1| peptidase SspA family [Dichelobacter nodosus VCS1703A] Length = 323 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 19/271 (7%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVED----NSPHVARIAIRGQI-----EDSQELIERI 57 KI R++ + L L + + + PHVA I I G I +++++ E + Sbjct: 33 KIIFRFIFIGLAVLYLAVMTQIEQKNKVKTVHEPHVALIHISGVIGAQEQSNARDINEVL 92 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLIS 115 + +D A++++++SPGGS I+R I ++K + PV + +M AS Y I+ Sbjct: 93 KNAFTNDQTQAVVLNINSPGGSPVQSGKIYREIMRLKKENKIPVYAFIEDMGASGAYYIA 152 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I S+VGSIGV+ V L KLG+ + + KA +P + + + Sbjct: 153 AAADQIYTDPASIVGSIGVISGGVGVGDLLKKLGLESRIFTAGAHKAFLNPAEPLKKEEL 212 Query: 176 QMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 MQ ++D + F+ V E R I +K L G WTG +A +GL+D + +V Sbjct: 213 AHMQTLLDDLHQQFIAAVKEGRGERINAEKNPELFSGLFWTGTQALPLGLVDSLDDFSQV 272 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L D + D+ P K+ W L+ Sbjct: 273 ------LARDFKDIAVIDYTPEKSPWEAFLR 297 >gi|260494495|ref|ZP_05814625.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] gi|260197657|gb|EEW95174.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33] Length = 551 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 130/275 (47%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 391 LYPEFTETINKLKVNMEGFSKGKGFDIFDIFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK+ GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGSLNDCIDSLAK-DLELKDFKLIYIRGRK 509 Query: 257 NYWFCD--LKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 510 SMMEVVSAMKPQFIKSDIIEKIEMIKSYSNKILYY 544 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 101/243 (41%), Gaps = 25/243 (10%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+L K K + +SL + V F+ + VED ++ I+I + + L++ +E + Sbjct: 27 FILGKFKNKDK-ISLKGVKTVVFNLNELVEDY--MISTISINKTL-SHEVLLKALENLVN 82 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQ----KVKNRKPVITEVHEMAASAGYLISCAS 118 D +I+ + ++ K+ K +I + Y +S + Sbjct: 83 DKKIKKIIIDVD----EVDLSRVHIEELKGIFEKLSVNKEIIA-IGTTFDEYSYQVSLLA 137 Query: 119 NIIVAAETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNP 172 N I T S G ++ PY K L GV++ ++ K FS +++ Sbjct: 138 NKIYMLNTKQ--SCLYFRGYEYKEPYFKNILATFGVTVNTLHIGDYKVAGESFSNNKMSE 195 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQ 230 + + + ++ ++ + F+ LV E R + T + G + +A ++GLID + Sbjct: 196 EKKESLINIKETLFQNFINLVKEKRKVDI--TKEILSGDLIFANSEKAIQLGLIDGLSTY 253 Query: 231 EEV 233 EE+ Sbjct: 254 EEI 256 >gi|119477001|ref|ZP_01617282.1| protease IV [marine gamma proteobacterium HTCC2143] gi|119449808|gb|EAW31045.1| protease IV [marine gamma proteobacterium HTCC2143] Length = 621 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 10/206 (4%) Query: 37 HVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +A I G I D L + I ++ RD+S AL++ + S GGSA+A E I Sbjct: 326 KIAVIVASGMILDGDWPPGYIGGDSLAQLIRQVRRDESVDALVLRVDSGGGSAFASEVIR 385 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R + +K + P++ + AAS GY IS ++ I A T+L GSIG+ +P ++ L Sbjct: 386 RELALLKQQGRPLVVSMGSTAASGGYWISALADEIWATPTTLTGSIGIFSAFPTIEKTLG 445 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+S V ++ M +N + MQ +++ Y F+ +V+ R++ D+ Sbjct: 446 KLGISNDGVGTTAMADAGRIDRPLNSVFGRAMQSSLENGYARFLTIVASGRDMTTDQVDD 505 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ GR+W+GA+A GL+D +GG ++ Sbjct: 506 VAQGRVWSGADAFDKGLVDQLGGLDQ 531 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 95/256 (37%), Gaps = 24/256 (9%) Query: 51 QELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 Q++I+ + S D T L++ L + GG + + +++ + I + + + Sbjct: 92 QDVIDAVRYASEDQRITTLVLKLDDLAFGG-ISKIQEVSLVLEEFRRSGKKIIAIGDNYS 150 Query: 109 SAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 YL++ ++ I V SI GV Y K L+K+ ++ + K+ Sbjct: 151 QDQYLLASHADEIYLHPMGGV-SIKGYGVYRSY--YKKALEKMAINFHVFRVGNYKSAME 207 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----------DGRIW 213 P ++ + + + S + +V ++ RN+ D + G Sbjct: 208 PMMRESMSDDSRESNLAWLSSLWGEYVDTIAARRNVSADSVNHYANKFDQVLAEHQGD-- 265 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 + A G +D + ++E+ Q L +G + + W +++ S + Sbjct: 266 SARAAAATGFVDAIVDRDEINQQLINEIGATDEKGFYQRIGFERYLWIRNIELPSSVADG 325 Query: 273 EDTIPLMKQTKVQGLW 288 + + + + G W Sbjct: 326 KIAVIVASGMILDGDW 341 >gi|237742266|ref|ZP_04572747.1| protease IV [Fusobacterium sp. 4_1_13] gi|256845537|ref|ZP_05550995.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] gi|229429914|gb|EEO40126.1| protease IV [Fusobacterium sp. 4_1_13] gi|256719096|gb|EEU32651.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] Length = 578 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + + D++ + I + G I +S+ E +E++ +D A+++ Sbjct: 292 YYKEGSMTDSNNIIYVIPLEGDIVESETEVFSGEENINVSETLEKLNIAKENDKIKAVVL 351 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I ++++ KPV + +AAS GY IS +N I ++ GS Sbjct: 352 RVNSPGGSALTSDIIAEKVKELAEEKPVYVSMSSVAASGGYYISANANKIFVDRNTITGS 411 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S S K + + Y F+ Sbjct: 412 IGVVSILPDFSKLITDNGVNIEKISDGEYSDLYSVDS-FTEKKYNKIYNSNLKVYEDFLN 470 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS+ R I +K +++GRIWTG EA K+GL D +GG E +L Sbjct: 471 VVSKGRKIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNETIYALAE 518 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 26/218 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ IE +S DD +I+ ++ G S E + + + K +I + Sbjct: 84 TLLQSIENVSYDDRVEGIILKIN---GDSLSYAQSEELAHELSMARAANKKIIAYFENVG 140 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP------FLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY + DK GV + K Sbjct: 141 RK-NYYLASYANEIYMPSANSTN----VNIYPYFREEFYIKQLADKFGVKFNIIHVGDYK 195 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S ++ +A + V+D +Y+ F+ +VS +R I D + DG + + Sbjct: 196 SYMENLASSTMSKEAREDTVRVLDKNYNNFLDVVSLNRKINRDDLDKIIKDGELVAASSV 255 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + LID + V +G I ++++ Sbjct: 256 DLMNNNLIDKYAYWDNVISM---VGGKDKIITVQEYTK 290 >gi|310778441|ref|YP_003966774.1| signal peptide peptidase SppA, 67K type [Ilyobacter polytropus DSM 2926] gi|309747764|gb|ADO82426.1| signal peptide peptidase SppA, 67K type [Ilyobacter polytropus DSM 2926] Length = 578 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 16/243 (6%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 + + +A I G+I S +I + RD + +++ + SPGGS Sbjct: 295 QSSGKKIAVIYGDGEILYSNSGRGAQQSITPDTIISELNMAVRDKNVVGIVLRIDSPGGS 354 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A E I I+ + KPV + +AS GY IS + + I A ++ GSIGV+ P Sbjct: 355 ALASEVINAKIRSI--EKPVYVSMGGTSASGGYYISASGDRIFAERDTITGSIGVVSLVP 412 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V KLG+ I+SV+ + S + + + + Y F VS RNI Sbjct: 413 DVSELAGKLGIKIESVQKGKLSGIYSITDGMTKGERERIYESSSKIYSEFKERVSSGRNI 472 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPKN 257 P + L+ GR+W G EA + GL+D +GG ++ + + + ++ +I+ NP + Sbjct: 473 PMSQMESLAGGRVWLGEEALEKGLVDGIGGLQDTIKIMAKDLQLSEYNVVEIRRENPFEK 532 Query: 258 YWF 260 + Sbjct: 533 LFM 535 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 107/278 (38%), Gaps = 51/278 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVV----YFSWSSHVEDN------------------SPHV 38 + F++K+I + + + +V + ++ F + VE + Sbjct: 11 LLFIMKEIASFLIKIVMVMVILIILLTVFVPKTPVEKAPIRKNTYIELDLSNPVGERGSL 70 Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAY----AGEAIFRAIQKVK 94 + I G+ + ++ +++ D LI+ + S E + R I++ + Sbjct: 71 SIFTIEGEKVNFYNMLNYLDKGKNDQRIDGLILKVDS----VALNRAQVEELGRKIKEYR 126 Query: 95 N-RKPVITEVHEMAASAG-----YLISCASNIIVAAETSLVGS-I-GVLFQYPYVKPFLD 146 K V S G Y ++ ++ I+ + GS I G + PY+K D Sbjct: 127 EVGKKVYAF------SRGFQNRNYSLAVNADEIIMPPSRGAGSNISGYFMELPYMKRLSD 180 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+G+ + K+ + E++P+ + + ++D Y+ FV+ VS SRNI Sbjct: 181 KIGIKYDVIHVGDYKSYGENYVREEMSPEFRENITRLLDRIYYNFVQDVSVSRNIDERTL 240 Query: 205 -LVLSDGRIWTGAEA---KKVGLIDVVGGQEEVWQSLY 238 + +G +A K+ L+D + E + Sbjct: 241 SRKILNGDFVLA-DAFKMKEEKLVDSLMYYHEFLKERK 277 >gi|308049662|ref|YP_003913228.1| signal peptide peptidase SppA, 67K type [Ferrimonas balearica DSM 9799] gi|307631852|gb|ADN76154.1| signal peptide peptidase SppA, 67K type [Ferrimonas balearica DSM 9799] Length = 611 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 11/208 (5%) Query: 34 NSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + +G I + + + +D+ A+++ + S GGSAYA E Sbjct: 321 GDNQIAVVVAKGTILNGDQPAGTIGGVSTSRLLREARQDEKVKAVVLRVDSGGGSAYASE 380 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + + ++ KPVI + +AAS GY IS ++ I A T++ GSIG++ + Sbjct: 381 QIRQEVLALQAAGKPVIASMGSVAASGGYWISANADRIFAQPTTITGSIGIIGLITTFED 440 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +GV V ++ M S + +++Q +D Y F++LVS +R++P ++ Sbjct: 441 SAAAVGVYADGVGTTEMAG-LSVLRPLPDGFKRIVQQGLDKGYQDFIQLVSSARDLPLEQ 499 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++ GRIW+G A +GL+D +G E Sbjct: 500 VDNIAQGRIWSGKAALDLGLVDEMGDLE 527 Score = 85.2 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 101/277 (36%), Gaps = 49/277 (17%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ------------ 51 +K+ V +++ + +V + I + G + + + Sbjct: 21 TTRKVIVNLVFFAVLAVVIVAMTGDELEPVPDGGALVIKLDGILVEQKRPLDPIELITGQ 80 Query: 52 -----------ELIERIERISRDDSATALIVSLSSPG---GSAYAGEAIFRAIQKVKNR- 96 +L+ IE + DD T +++ PG G + I +A+Q + Sbjct: 81 SSDEPKEILMADLLLAIEEAAADDRITGIVLK---PGQLSGGLSKLQEIGKALQAFQQTG 137 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY-PYVKPFLDKLGVSIKSV 155 KPVI + + YL++ ++ I +V SI Y Y K L KL ++ Sbjct: 138 KPVIAQAGWLD-QGNYLVASFADEIQLNPGGVV-SIDGFGIYQVYFKEALAKLKINTHLF 195 Query: 156 KSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-----------D 202 + K+ P++ ++ +A + V+D + +V V+++R+I Sbjct: 196 RVGKYKSFAEPYTRDSMSDEAKEANIAVLDDLWGAYVTTVAQNRDIDPALLAPSLDSLNA 255 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + G + A GL+D + E+ L Sbjct: 256 QLEAVG-GDM--AKLALNTGLVDALMTDIEMRDRLME 289 >gi|225619707|ref|YP_002720964.1| periplasmic serine protease SppA [Brachyspira hyodysenteriae WA1] gi|225214526|gb|ACN83260.1| SppA, Periplasmic serine proteases (ClpP class) [Brachyspira hyodysenteriae WA1] Length = 268 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 6/231 (2%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMA 107 +++LI E + A+++ + SPGGS + E + ++ +K + KP++ MA Sbjct: 9 TEKLISDFEYYFKHPKVKAIVLQVDSPGGSLTSCEEALKYLKDLKKKYPKPIVASFRSMA 68 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS ++ I A E++L GSIGV+ Q+ V +DK G+ + ++KS K SPF Sbjct: 69 ASGGYYISMIADKIYANESTLTGSIGVISQFFNVSELMDKYGIKMYTIKSGRNKDSLSPF 128 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDV 226 E + QD+ D F +V +SR + DGR+++G +A +VGLID Sbjct: 129 REPREDELAYWQDMTDEFVGQFTNVVEQSRGDKIKGNREDIFDGRVFSGKKALEVGLIDS 188 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 +G + + +G + P + D+ NL +++ E P Sbjct: 189 IGTLNDAVKDAAEMGGIEDEEPYIIKKPKEKN---DVFNLLFANISESIKP 236 >gi|170695403|ref|ZP_02886548.1| peptidase S49 [Burkholderia graminis C4D1M] gi|170139594|gb|EDT07777.1| peptidase S49 [Burkholderia graminis C4D1M] Length = 331 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 10/243 (4%) Query: 7 KIKTRYVMLSLVTLTV--VYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIER 59 KI R + L+LV V V+ + + H A IA+ G+I +++++ +E Sbjct: 47 KIFFRLLFLALVAFVVWTVFDFSGDKLAASGRHTALIALEGEISANTRANAEDISAALES 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D +I+ SPGGS I+ +++++ + P + V +M AS GY + Sbjct: 107 AFEDSGTAGVILRCDSPGGSPVQAGIIYDQMRRLRAKHPSIPLYVVVGDMCASGGYYAAA 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A + I + S+VGSIGVL +DKLG+ + S K PFS PK Q Sbjct: 167 AGDKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFYDPFSPETPKMDQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q+++D + F+ V + R +T + G WTG ++ ++GL D G V + Sbjct: 227 HAQEMLDQIHAQFIEAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGFGDANYVARE 286 Query: 237 LYA 239 + Sbjct: 287 IIK 289 >gi|148553446|ref|YP_001261028.1| signal peptide peptidase SppA, 67K type [Sphingomonas wittichii RW1] gi|148498636|gb|ABQ66890.1| signal peptide peptidase SppA, 67K type [Sphingomonas wittichii RW1] Length = 626 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 11/240 (4%) Query: 38 VARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + + G I D + + + AL+V + SPGGS E I Sbjct: 313 IGVLTVAGDIVDGDAPPGAAGGTTISDLLLDELGRKRTKALVVRVDSPGGSVTGAETIRS 372 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI + K PV+ + +AAS GY IS ++ I+A ++ GSIGV P + L K Sbjct: 373 AILQAKGLGLPVVVSMGGLAASGGYWISTPADRIIADPATITGSIGVFGILPTFQGSLAK 432 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG+S VK++P+ EP F +P+ MMQ ++ Y F LV++SR +P ++ + Sbjct: 433 LGLSADGVKTTPLSGEPDVFRGTSPQFDAMMQGSIEDVYRRFTGLVAQSRKLPIERVREI 492 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNL 266 ++GR+W GA A+++GL+D G ++ L +D + + P N W +++L Sbjct: 493 AEGRVWAGATARQIGLVDGFGSVDDAIAEAAKLAKLDPAKVRPLYIEKPLNPWKEMIRSL 552 Score = 92.2 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 100/280 (35%), Gaps = 50/280 (17%) Query: 8 IKTRYVMLS-LVTLTVVYFSWSSHVEDNSPHVA--RIAIRGQIEDS-------------- 50 IK V+++ L+ ++ + S P I + G + + Sbjct: 14 IKDGLVLIAMLIFFGTLFLALSIKPNSTLPSSGALVIDLDGTLVEQPAETDPLTLLAGNG 73 Query: 51 --------QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNR-KPVI 100 ++L ++ + + A+++ L S GG A RA+ K + KP++ Sbjct: 74 GIARETRLRDLERALQAAAESNGVKAIVLDLDSFAGGEQATIAAAGRALDKARAAGKPIL 133 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-----YVKPFLDKLGVSIKSV 155 Y ++ + + GV+ P Y K +D+LG++ K Sbjct: 134 AYATGYGDDG-YQLASHATEVWLNPLG-----GVILTGPGGSRLYYKGLMDRLGITAKIY 187 Query: 156 KSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI--------PYDKTL 205 + K+ P+ S+ +P+A + Q + ++ + + V ++R + Sbjct: 188 RVGAFKSAVEPYMRSDQSPEAREANQALANALWSTWTAEVGKARPKAKLAAYVERPTAII 247 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + GR+ A GL+D +G + + A+ Sbjct: 248 GEAGGRM--SQAALNAGLVDRLGDRNAFDSRVAAIAGSAG 285 >gi|294494857|ref|YP_003541350.1| signal peptide peptidase A [Methanohalophilus mahii DSM 5219] gi|292665856|gb|ADE35705.1| signal peptide peptidase A [Methanohalophilus mahii DSM 5219] Length = 372 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 143/298 (47%), Gaps = 14/298 (4%) Query: 6 KKIKTRYVMLSLV--TLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------EDSQE 52 K V+L ++ + ++Y++ ++ VA I I+G + S++ Sbjct: 75 KYAALIAVLLLVIGSSFAIIYYAAGGDFYPDNDRVAVIYIQGTMLTGSVPSGLGYATSED 134 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 + I + DDS A+++ ++S GGS A E I I+K + PV+T + ++AASA Sbjct: 135 ISSSIRKAVDDDSVKAIVLRVNSGGGSGSASEEINTEIRKAQQAGVPVVTSMGDVAASAA 194 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y +S ++++IVA ++ GSIGV++ + + + ++ G+ KS K + ++ Sbjct: 195 YHVSSSTDLIVANRNTMTGSIGVIWTFRNMSAYYEEEGIDFHVAKSGEFKDMGGTWRGLS 254 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + V+ SY+ FV+ V++ RN+ + ++DGRI+TG AK++GLID G Sbjct: 255 DEEKEYADRVIMESYNLFVQDVAQGRNMTVSEVKDIADGRIYTGVSAKRIGLIDEYGNFY 314 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +G + I N P + +++E+ + +++ L Sbjct: 315 DAIDRAAGMGGIEGEPSIYYVNKPSITNLLFGSEVQNDNMVENFVNYYEKSPFGKLAY 372 >gi|108758821|ref|YP_630700.1| signal peptide peptidase SppA, 36K type [Myxococcus xanthus DK 1622] gi|108462701|gb|ABF87886.1| signal peptide peptidase SppA, 36K type [Myxococcus xanthus DK 1622] Length = 832 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 17/270 (6%) Query: 38 VARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +A + + G I ++ +I +E+ D S A++V + S GG A Sbjct: 537 IAVVPVLGDIIGGRSREDPLGFSRLAGAETVIRALEQAQSDPSVAAIVVRVDSGGGEVLA 596 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 ++ A+ + KPV+ + +MAAS GY + ++ + A T+L GSIGV + P V+ Sbjct: 597 SHLMYEAVMEAAKHKPVVASMGDMAASGGYYAAIGAHEVFALPTTLTGSIGVFYIKPAVE 656 Query: 143 PFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L LGV +S+ +P+ + P+ + Q D+SY F+ V+ R + Sbjct: 657 GLLSGLLGVHQESLTRAPLADILDVWRPWTPEEQEAAQAWADASYDSFITEVALRRRMDK 716 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKDWNPPKNYWF 260 K ++ GR+W+G +A GL+D +GG E + G+ +F Sbjct: 717 AKVDEVARGRVWSGQDALARGLVDKLGGLLEAVDSARMRAGIPPDEELDLVVMGEARGFF 776 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 L +P + + L A+ Sbjct: 777 SALGGEPGVRAALSLLPAQEPALPESLRAL 806 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 85/201 (42%), Gaps = 21/201 (10%) Query: 52 ELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKP----VITEVHEM 106 L ++ ++DD ++V + S PG S E + +A+ +++ V+ ++ Sbjct: 320 RLTRWLDLATQDDRLAGVVVKMESLPGVSWGKAEELRQALLRLRASGKRVMAVVLSTDDL 379 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 GY ++ A++ I A + S++ G+ ++KLGV + K P Sbjct: 380 ----GYFVASAADRIYALQESILYINGLAVHLQTYGGTMEKLGVHWDVARVGRFKTAPEQ 435 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG----AEAK 219 +E + +++ +D+ + + V E R +P ++ L W G A Sbjct: 436 LSRTEPSDASLESTNAYLDTEVAVYEKAVQEGRKVPVERLHAL-----WALGLPHPKRAV 490 Query: 220 KVGLIDVVGGQEEVWQSLYAL 240 ++GL+D + E+ + + L Sbjct: 491 ELGLMDGIISSTELDKKVAEL 511 >gi|83644957|ref|YP_433392.1| periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] gi|83633000|gb|ABC28967.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 329 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 15/267 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSA 66 ++ L + + + + PH A I + G I S+E ++ + ++SA Sbjct: 52 FLYLFFIVIALSPGVGKNVAARTEPHTAVIEVNGVIAASEEANADAIVSALRDAFEEESA 111 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVA 123 A+I+ ++SPGGS ++ I ++K K V + ++ AS Y I+ A++ I A Sbjct: 112 KAVILRINSPGGSPVQAGYVYDEIGRLKGEYPDKKVYAVIMDIGASGAYYIAAAADEIYA 171 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 + SLVGSIGV +DKLGV + + K+ PF V ++ Q V++ Sbjct: 172 DKASLVGSIGVTASGFGFVDAMDKLGVERRIFTAGEHKSFLDPFVPVKEDERELWQGVLN 231 Query: 184 SSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 +++ F+ V + R +L G IW+G +A + G + + S + Sbjct: 232 TTHKQFIEQVEKGRGDRIHKDNPLLYSGMIWSGEQALGL------GLIDGLGSSGFVARE 285 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + K+ ++ P +N + L L +S Sbjct: 286 VVKVEKLINYTPKRNPFDELLGKLGVS 312 >gi|259418110|ref|ZP_05742029.1| peptidase S49 [Silicibacter sp. TrichCH4B] gi|259347016|gb|EEW58830.1| peptidase S49 [Silicibacter sp. TrichCH4B] Length = 298 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 19/279 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRD 63 RY++ + S + P VA + + G I + L +ER + Sbjct: 20 RYLVSGGWAFYIGAMSVRLPFKKRPPLVAVVRLSGAIGMAGRGSLNDTTLAPVLERAFKK 79 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNII 121 A+ + ++SPGGS I I+++ PV V ++AAS GY ++ A++ I Sbjct: 80 GKPQAVALEINSPGGSPVQSALIGARIRRLAEEHDVPVFAFVEDVAASGGYWLAAAADEI 139 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A +S+VGSIGV+ FL + G+ + + K+ PF N V ++ + Sbjct: 140 FADASSVVGSIGVISSGFGAHIFLARQGLERRVHTAGESKSMLDPFRPENEGDVARLKVL 199 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ + F+ V+E R L G +W A +GLID +G + V Q + Sbjct: 200 LNDIHANFIEHVTERRGTKLTSDEKLFTGEVWLARRAIGLGLIDGIGHLKPVLQERFGKK 259 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 V +++ + K + + S+ ED + ++ Sbjct: 260 V-----RLRRYGVKKPFL-----SRFGLSMAEDALAAVE 288 >gi|294785166|ref|ZP_06750454.1| protease IV [Fusobacterium sp. 3_1_27] gi|294486880|gb|EFG34242.1| protease IV [Fusobacterium sp. 3_1_27] Length = 578 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + + D++ + I + G I +S+ E +E++ +D A+++ Sbjct: 292 YYKEGSMTDSNNIIYVIPLEGDIVESEIEVFSGEENINVSETLEKLNIAKENDKIKAVVL 351 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I ++++ KPV + +AAS GY IS +N I ++ GS Sbjct: 352 RVNSPGGSALTSDIIAEKVKELAEEKPVYVSMSSVAASGGYYISANANKIFVDRNTITGS 411 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S S K + + Y F+ Sbjct: 412 IGVVSILPDFSKLITDNGVNIEKISDGEYSDLYSVDS-FTEKKYNKIYNSNLKVYEDFLN 470 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS+ R I +K +++GRIWTG EA K+GL D +GG E +L Sbjct: 471 VVSKGRKIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNETIYALAE 518 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 26/218 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ IE +S DD +I+ ++ G S E + + + K +I + Sbjct: 84 TLLQSIENVSYDDRVEGIILKIN---GDSLSYAQSEELAHELSMARAANKKIIAYFENVG 140 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP------FLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY + DK GV + K Sbjct: 141 RK-NYYLASYANEIYMPSANSTN----VNIYPYFREEFYIKQLADKFGVKFNIIHVGDYK 195 Query: 162 AEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA-- 216 + S ++ +A + V+D +Y+ F+ +VS +R I D + DG + + Sbjct: 196 SYMENLASSTMSKEAREDTVRVLDKNYNNFLDVVSLNRKINRDDLDKIIKDGELVAASSV 255 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + LID + V +G I ++++ Sbjct: 256 DLMNNNLIDKYAYWDNVISM---VGGKDKIITVQEYTK 290 >gi|23009603|ref|ZP_00050591.1| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 320 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 17/256 (6%) Query: 35 SPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +P VA + + G I + +ER A+ + ++SPGGS Sbjct: 21 APRVAVVRLSGAIGAVSPIRPGLSIATVAPSLERAFAVPDVAAVALIINSPGGSPVQSHL 80 Query: 86 IFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 IFR I+ + K V V + AAS GY+I+CA++ IVA SLVGSIGV+ Sbjct: 81 IFRRIRALAAEKKVKVFAFVEDAAASGGYMIACAADEIVADPASLVGSIGVVSAGFGFDR 140 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++++G+ + KA PF NP+ + ++++ F LV E R Sbjct: 141 LIERIGIERRVHTQGEAKAMLDPFRPENPQDIARLKEIQADVQALFTGLVRERRP-TLTA 199 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G +WTG +A +GL+D +G + Y G D +R I + + W L Sbjct: 200 DRDLFTGAVWTGRQALDLGLVDALGDLRGTLRERY--GEDVELRLIAET---RGSWLARL 254 Query: 264 KNLSISSLLEDTIPLM 279 + + + Sbjct: 255 LRRAGPGQTAELADAL 270 >gi|118474707|ref|YP_892637.1| signal peptide peptidase SppA, 36K type [Campylobacter fetus subsp. fetus 82-40] gi|118413933|gb|ABK82353.1| signal peptide peptidase SppA, 36K type [Campylobacter fetus subsp. fetus 82-40] Length = 287 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 5/250 (2%) Query: 1 MEFVLKKIKTRYVML-----SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIE 55 ++F+ KI + + S V L +V + + ++ I+++G I D E++ Sbjct: 4 LKFIFSKIGAIFKFVNEYFKSFVFLLIVILIIVNSGKSEIANLTEISLKGAIIDESEILS 63 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +I D +++++ SPGGS I AI+ + + KPVI AS Y S Sbjct: 64 QIYEAKNDSFIKGVLLNIDSPGGSMAPSVQISDAIKDLASIKPVIAYASGTMASGSYYSS 123 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +N I A S +GSIGV+ Q P V+ KLGVS +++K+ K + N Sbjct: 124 IWANKIYANRGSFIGSIGVIVQSPNVEELAKKLGVSTQTIKAGKYKEAGTFIRGWNEDEK 183 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q +V+ SY F V+ +RN+ DK + ++ R++ +AK VGLID V EV Sbjct: 184 NELQSLVNRSYEMFYTDVAMARNLDIDKKDIWANARVFLAPDAKSVGLIDDVKSYFEVKS 243 Query: 236 SLYALGVDQS 245 L L S Sbjct: 244 ELELLSGVAS 253 >gi|297559382|ref|YP_003678356.1| signal peptide peptidase SppA, 36K type [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843830|gb|ADH65850.1| signal peptide peptidase SppA, 36K type [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 562 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 16/231 (6%) Query: 33 DNSPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPG 77 + H+A I+ G I S + +D A++ + S G Sbjct: 271 NTGGHIALISATGTISLGRTRRSPLGGGTVMGSDTVAAAFRAARKDPQVKAVVFRVDSRG 330 Query: 78 GSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A +AI R + PV+ + ++AAS GY ++ S+ +VA +L GSIGV+ Sbjct: 331 GSPTASDAIRRETELTSKAGIPVVAVMGDVAASGGYYVTLGSDAVVAQPGTLTGSIGVIT 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P + ++ GV+ SV++ + + ++D Y F V+ + Sbjct: 391 GKPVLGALKEQYGVTSDSVRTGEHAGMFDTDRPFTESEWERVNALLDEIYEDFTGKVAAA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 R + ++ ++ GR+WTG +A + GL+D +GG E + + Sbjct: 451 RGMTREQVHEVARGRVWTGRDAHERGLVDELGGLETAVRLAREKAGAGPLP 501 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 12/231 (5%) Query: 52 ELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 +++E I R +RD AL+V + S G + + + + KP + Sbjct: 50 DVLEGIRRGARDPRVAALLVRVDARSLG--FAKVQELRDTVADFRAAGKPAVAWADSFGE 107 Query: 109 SAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + Y ++CA + +V A T ++G G++ + +VK LDKL VS + K Sbjct: 108 TGEGNLPYYLACAFSRVVMAPTGVLGLTGLMMRTTFVKGALDKLDVSYEVGARHEYKNAM 167 Query: 165 SPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + +E + +V S V VS +R +P ++ L + EA + Sbjct: 168 NSVTETGYTAAQREASDRIVTSLGDQIVEAVSLARGLPREEVRALVSKGPFLAREAVEHK 227 Query: 223 LIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 L+D + ++EV+ L+ L + ++ + ++ +N L Sbjct: 228 LVDGLAHRDEVYAQLFGELSGEPQLQFVTRYHRKHTAPQQLSRNTGGHIAL 278 >gi|152990177|ref|YP_001355899.1| protease IV [Nitratiruptor sp. SB155-2] gi|151422038|dbj|BAF69542.1| protease IV [Nitratiruptor sp. SB155-2] Length = 296 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 8/276 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K ++L L+ L + P++ I + G I D++ ++++IE + Sbjct: 23 LDFLQKYFKGILLLLVLILLLGAF----QKTTLQKPNLMEIRLDGPIIDAKNILKKIE-L 77 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + + ++ +SSPGG+ I RAI+++ +KPVIT AS Y S S Sbjct: 78 AEQPNIKGILFVVSSPGGAVAPSIEISRAIKRISAKKPVITYAAGTLASGSYYASIWSKK 137 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A S VGSIGV+ + P +K LDKLGV+ + VK+ K +PF + +Q Sbjct: 138 IIANPGSAVGSIGVILEAPNLKGLLDKLGVAPQVVKAGKYKEAGTPFRPWKTYEKEELQK 197 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V++ +Y FV V+++R + ++ I+T +A+KVGLID VG + L + Sbjct: 198 VINDTYDMFVHDVAKARRLDPKNKDQFAEAHIFTARQAQKVGLIDEVGDYFSAKKELEKI 257 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 +RK F D S+++ D + Sbjct: 258 ---SGVRKAIWAKEDPWEKFMDQVAQKSSTMIVDML 290 >gi|32267191|ref|NP_861223.1| hypothetical protein HH1692 [Helicobacter hepaticus ATCC 51449] gi|32263244|gb|AAP78289.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 294 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 135/279 (48%), Gaps = 12/279 (4%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN---SPHVARIAIRGQIEDSQELIERI 57 ++F+ K K +V L + + + ++ + SP++A++ + I +S+ +I Sbjct: 15 LDFINKYFK------VIVFLFIAFLILAPDIDKSDSVSPNLAKLYLTTPIYESESFAAQI 68 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 E+I+++ + +++ + SPGG+ A I I+ + + PVI AS Y Sbjct: 69 EKITKNKNIKGVLLIIDSPGGTVGASIEIADMIKSLAQKMPVIAYTQGSMASGSYYAGMY 128 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 +N I A +L+GSIGV+F +K LDK+G+ + +K+ K + + + + Sbjct: 129 ANEIYANRGALIGSIGVIFNGLNIKEMLDKIGIKEQGIKAGSYKEVGTSMRQWSEEEKLF 188 Query: 178 MQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +++++ Y F + V ++R + ++G++++ +A ++GLID VG +E Sbjct: 189 LENLLQEQYELFRKDVIKARGSRLKVVDYREFAEGKVFSAHKALQLGLIDKVGSMQEAVA 248 Query: 236 SLYA-LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 +L GV ++I KD F D + I SL Sbjct: 249 TLQQHTGVKEAIWLKKDKFEVYMDKFLDSASSKILSLSA 287 >gi|237741816|ref|ZP_04572297.1| protease IV [Fusobacterium sp. 4_1_13] gi|229429464|gb|EEO39676.1| protease IV [Fusobacterium sp. 4_1_13] Length = 551 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 129/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAVINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EVPIYISMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 391 LYPEFTETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G +AK+ GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGNQAKENGLVDELGSLNDCIDSLAK-DLELKDFKLTYIRGRK 509 Query: 257 NYWF--CDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 510 SIMEIVSAMKPQFIKSDIIEKIEMLKSYSNKILYY 544 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 14/182 (7%) Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI----GVLFQYP 139 E I +K+ K +I + Y ++ +N I T S G ++ P Sbjct: 104 EEIKEIFEKLSVDKEIIA-IGTTFDEYSYQVALLANKIYMLNTKQ--SCLYFRGYEYKEP 160 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 Y K L LGV++ ++ K FS +++ + + + ++ ++ + F+ LV E R Sbjct: 161 YFKNILATLGVTVNTLHIGDYKVSGESFSNDKMSEEKKESLINIKETLFQNFINLVKEKR 220 Query: 198 NIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + T + G + +A ++GLID + EE+ VD + + + Sbjct: 221 KVDI--TNEILSGDLIFANSEKAIQLGLIDGLSTYEEIGIDYNEDTVDI-LEYVSAYKRK 277 Query: 256 KN 257 KN Sbjct: 278 KN 279 >gi|262039550|ref|ZP_06012849.1| protease IV [Leptotrichia goodfellowii F0264] gi|261746428|gb|EEY33968.1| protease IV [Leptotrichia goodfellowii F0264] Length = 549 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 130/273 (47%), Gaps = 12/273 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPG 77 + + +A I + G IE + + E+++++ + L++ ++SPG Sbjct: 273 YKEKKNKSKDTIAIINLEGIIEPKKSNKVNITYKNVCEKLDKLEDIKNLKGLVLRINSPG 332 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA E I + ++K+ P+ + ++ AS GY I+ A I A +L GSIGV+ Sbjct: 333 GSALESEKIHQKLKKL--DVPIYISMGDVCASGGYYIASAGKKIFADSMTLTGSIGVVLM 390 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 YP + L+K+ V+I+ + + F ++ ++ + + ++ Y F V +R Sbjct: 391 YPELSETLNKIDVNIEGFEKGKGFDIFNIFETLSEESKEKIIHTMNEVYSEFKSHVIAAR 450 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPPK 256 + ++ ++ GR+W G+EA + LID +G E+ +++ L +++ +I + Sbjct: 451 EMSEEELEKIAGGRVWLGSEAVNINLIDEIGSLEKSVETMVKDLKLEKYKVEIIELKKSL 510 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 D+K IS LED I M+ + L+ Sbjct: 511 KETLTDIKAPLISEELEDKIRFMQNNVNRILYY 543 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 36/229 (15%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS-------- 74 V F S ED + I I +I ++++ ++ ++ D + +I+ + Sbjct: 45 VVFDVSDVKEDEIG--SAIEINSKI-SFYDVLQGLKNLTTDKNIEKIIIDVDKLNLPLAK 101 Query: 75 ----SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA--AETSL 128 S IF I K K + T E Y + ++ + S Sbjct: 102 WEELS---------EIFDEIGKNKELVAIGTFFDERK----YRYAIIASKVFMLNTRQST 148 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSY 186 V G ++ PY K FL K G+ + + K +S +++P+ Q + ++ +S + Sbjct: 149 VCFRGYEYKEPYWKSFLAKFGIKMNILHIGDYKVAGENYSHDKMSPEKKQSILNIKESLF 208 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGR-IWTGAE-AKKVGLIDVVGGQEEV 233 F++ V R + + + +G I+ G + A + LID V EE+ Sbjct: 209 RNFIKSVENKRGVNIEN--EILNGDFIFVGTDKALESKLIDGVADYEEI 255 >gi|218531356|ref|YP_002422172.1| peptidase S49 [Methylobacterium chloromethanicum CM4] gi|218523659|gb|ACK84244.1| peptidase S49 [Methylobacterium chloromethanicum CM4] Length = 286 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 19/271 (7%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + P VA + + G I + +ER +A+ + ++SPGGS Sbjct: 19 ETPPRVAVVRLSGAIGAVSPIRAGLSIGTVAPSLERAFTMPGLSAVALVINSPGGSPVQS 78 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I+R I+ + K V V + AAS GY+I+CA++ IVA SLVGSIGV+ Sbjct: 79 HLIYRRIRALAAEKEIRVFAFVEDAAASGGYMIACAADEIVADPASLVGSIGVVSAGFGF 138 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 ++++G+ + KA PF NP+ + ++++ F LV E R Sbjct: 139 DRLIERIGIERRVHTQGEAKAMLDPFRPENPQDIARLKEIQADVQALFSGLVRERRP-TL 197 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 D + L G +WTG +A +GL+D +G ++ Y VD ++ + W Sbjct: 198 DASRDLFTGAVWTGRQALDLGLVDALGDLRGTLRARYGEKVD-----LRLVAENRGSWLA 252 Query: 262 DLKNLSISSLLEDTIP--LMKQTKVQGLWAV 290 L + +P L+ + + WA Sbjct: 253 RLLRRAGPGQTTTGLPDALIAAVEERAAWAR 283 >gi|37523775|ref|NP_927152.1| protease IV [Gloeobacter violaceus PCC 7421] gi|35214780|dbj|BAC92147.1| protease IV [Gloeobacter violaceus PCC 7421] Length = 632 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 110/239 (46%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G ++ S+ LI+ + R + A+++ ++SPGG+ + + R +++++ +KPV+ + Sbjct: 368 GPVQGSEPLIKALREAGRREDIKAVVMRVNSPGGAGLGCDLVRREVERLRAKKPVVVSMG 427 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + AAS GY I+ ++ IVA ++ GSIG+ P V+ L ++ + K Sbjct: 428 DSAASGGYWIAMDASAIVAQPSTQTGSIGIFAVIPNVEQLNRDLTLTPEVFKRGARADVL 487 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S +NP+ ++ + SSY FV L ++ RN + L+ GR W G +A ++GL+ Sbjct: 488 SGNRPLNPEEAKIFDQELLSSYRRFVALAAKGRNKTVPQMEALAQGRTWLGRKALELGLV 547 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 D +GG + + + L + + ++ + + Sbjct: 548 DRLGGIDTAIALAAEKAKVAPDTVALERLEGEQSTLASLLGAEATRMALRSLGIERTVS 606 Score = 92.9 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 80/208 (38%), Gaps = 12/208 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPVITEVHEMA 107 ++ ++ +++ + D +++ L G++ E + A+ + + E Sbjct: 119 KDALDNLKKAAIDTRIKGVVLRLD---GTSLGWARVEELREALMQFRQTGKFAVGYAEGI 175 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSP 166 + GY ++ A + T G++ ++ L K+G+ ++ + K+ Sbjct: 176 SERGYYLALALDRFYLPPTGGFEMNGLVSSNSHLPGLLAKIGIGVQYFRYGKYKSVSGET 235 Query: 167 FS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 F + +M+ + Y FV V+ +R +P + L D T A LI Sbjct: 236 FGQPAFSEPVKEMINFNLTEQYETFVGAVATARKLPASEVRRLIDTNRPTAEWALANKLI 295 Query: 225 DVVGGQEEV---WQSLYALGVDQSIRKI 249 D + +EV + + D+ + K+ Sbjct: 296 DGIAYWDEVEAGLKKQAGIAADKDLPKV 323 >gi|300871688|ref|YP_003786561.1| periplasmic serine proteases ClpP class [Brachyspira pilosicoli 95/1000] gi|300689389|gb|ADK32060.1| periplasmic serine proteases ClpP class [Brachyspira pilosicoli 95/1000] Length = 277 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 11/241 (4%) Query: 37 HVARIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 HVAR G IE+ +++LI+ E +DD+ A+++ + SPGG+ + E + +Q++ Sbjct: 7 HVARKNSLG-IEEKSVTEKLIDDFEYYMKDDNVKAIVLQVDSPGGALTSCEEALKYLQEL 65 Query: 94 KNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K + KP++ MAAS GY IS ++ I A E++L GSIGV+ Q+ V +DK G+ Sbjct: 66 KKKYPKPIVASFRSMAASGGYYISMIADKIYANESTLTGSIGVISQFVNVSSLMDKYGIK 125 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDG 210 + ++KS K SPF E + QD+ F +V +R L DG Sbjct: 126 MYTIKSGRNKDSLSPFREPREDELAYWQDMTYEFVAQFTNVVETARGDKIKGNREDLFDG 185 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R+++G A +VGLID +G ++ + + + P + NL +SS Sbjct: 186 RVFSGKRALEVGLIDNIGTLKDAIKDAAEMAEIKDEEPYIIKRPENKNFI----NLILSS 241 Query: 271 L 271 + Sbjct: 242 M 242 >gi|294012283|ref|YP_003545743.1| protease IV [Sphingobium japonicum UT26S] gi|292675613|dbj|BAI97131.1| protease IV [Sphingobium japonicum UT26S] Length = 632 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 12/242 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGS 79 +H N + + I G I D + + + + + AL+V + SPGGS Sbjct: 304 AHKPANGGEIGVLTIAGDIVDGEAGPGTAAGDTIAALLRKALAEKDLKALVVRVDSPGGS 363 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E I AI + K+ P++ + +AAS GY +S +++I A ++ GSIGV Sbjct: 364 VMASEKIRSAIMEAKSEGLPIVASMGNVAASGGYWVSTPADVIFAEPDTITGSIGVFGIL 423 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K+GV+ VK++P+ +P P+ ++MQ V+ Y FV LV++SR Sbjct: 424 PSFEGTLAKIGVTTDGVKTTPLSGQPDIAGGTTPEFDRIMQMGVEDIYGRFVGLVAQSRR 483 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPK 256 + ++ GR+W G A+++GL+D GG EE L R + P Sbjct: 484 KTPQQIDAIAQGRVWDGGTARQIGLVDRFGGLEEAVAEAAKLAKIDPAKARPYRIAREPD 543 Query: 257 NY 258 + Sbjct: 544 KF 545 Score = 95.6 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 15/213 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAAS 109 +++ ++ D A++++L GG A + +A+ V+ +KPV + + Sbjct: 84 DIVAALDAARDDRKVKAVVLNLDGFMGGGQVALARVGKALDAVRAAKKPVFAYA-TIYSD 142 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ V G Y K +DKLGV+ + K+ PF Sbjct: 143 DSYQLAAHASESWVNPLGGVAITGRGGSGLYYKGLIDKLGVNTHVYRVGTYKSFVEPFTR 202 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--------IPYDKTLVLSDGRIWTGAEAK 219 +E +P+A Q Q + D+ + + + V+++R + G A Sbjct: 203 TEQSPEARQANQALADALWEDWRQEVAKARPRARLAAYVRDPAGLAEAAGGN--LAKAAV 260 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 GL+D +G + + + D K D+ Sbjct: 261 SAGLVDRMGDEAAFGARVAEVAGDAPDDKAGDF 293 >gi|237744633|ref|ZP_04575114.1| protease IV [Fusobacterium sp. 7_1] gi|229431862|gb|EEO42074.1| protease IV [Fusobacterium sp. 7_1] Length = 551 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 130/275 (47%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 391 LYPEFTETINKLKVNMEGFSKGKGFDIFDIFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK+ GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGSLNDCIDSLAK-DLELKDFKLTYIRGRK 509 Query: 257 NYWFCD--LKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 510 SMMEVVSAMKPQFIKSDIIEKIEMIKSYSNKILYY 544 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 25/243 (10%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+L K K + +SL + V F+ + VED ++ I+I + + L++ +E + Sbjct: 27 FILGKFKNKDK-VSLKGVKTVVFNLNELVEDY--MISTISINKTL-SHEALLKALENLVN 82 Query: 63 DDSATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D +I+ + E I +K+ K +I + Y ++ + Sbjct: 83 DKKIEKIIIDVD----EVDLSRVHIEEIKEIFEKLSVNKEIIA-IGTTFDEYSYQVALLA 137 Query: 119 NIIVAAETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNP 172 N I T S G ++ PY K L GV++ ++ K FS +++ Sbjct: 138 NKIYMLNTKQ--SCLYFRGYEYKEPYFKNILATFGVTVNTLHIGDYKVAGESFSNNKMSE 195 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQ 230 + + + ++ ++ + F+ LV E R + T + G + +A ++GLID + Sbjct: 196 EKKESLINIKETLFQNFINLVKEKRKVDI--TKEILSGDLIFANSEKAIQLGLIDGLSTY 253 Query: 231 EEV 233 EE+ Sbjct: 254 EEI 256 >gi|227501017|ref|ZP_03931066.1| S49 family peptidase [Anaerococcus tetradius ATCC 35098] gi|227216790|gb|EEI82188.1| S49 family peptidase [Anaerococcus tetradius ATCC 35098] Length = 327 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 121/226 (53%), Gaps = 4/226 (1%) Query: 32 EDNSPHVARIAIRGQI--EDSQE-LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + + + G I +D+ + ++ ++ D +I++++SPGGS YA E I Sbjct: 57 SNPKEKIKVVDVDGVIKADDANDFVVSELKDAKDDPLVKGVILNVNSPGGSVYASERIAN 116 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+ +K K PV T + +MAAS GY IS +N I A+ + GSIGV+ Q ++ DK Sbjct: 117 AIKALKKAKKPVYTVMGQMAASGGYYISAPTNRIYASNETWTGSIGVIIQSYSLQGLFDK 176 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ +++ + MK S ++N + + Q +V+S++ FV++V E R + + + Sbjct: 177 YGIKEQNITTGKMKDAGSQGRDMNKEEKEYFQGLVNSAFDRFVKIVVEGRGLSEKEVRKI 236 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +DGR++ G++A +GL+D +G + + + I++ N Sbjct: 237 ADGRVYDGSQALSLGLVDKIGDIDSAISDMISDNKLGDPMVIRNDN 282 >gi|206601560|gb|EDZ38043.1| Signal peptide peptidase, SppA [Leptospirillum sp. Group II '5-way CG'] Length = 349 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 19/278 (6%) Query: 35 SPHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSPGGS 79 + + I G I D + + + + D +++ + S GGS Sbjct: 65 RDKLLLVPINGFIGDQTSRGLPFLGGRDDTVTRIRATLRKAAEDPRVRGIVLLIDSAGGS 124 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 A + ++ +++ K + PV+ + +M AS Y +S A++ + TS+VGSIGV+ Sbjct: 125 VTASDRVYHLVREFKQKSGIPVMAMIGDMGASGAYYVSVAADEVWTHPTSVVGSIGVVIF 184 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 V + K+GV +++ S K SP + K + Q ++ Y F +VS +R Sbjct: 185 NVGVTGLMKKIGVEDRTLSSGAEKEMGSPLKPMTDKDRSLFQGLISDLYTQFFDIVSRNR 244 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP--P 255 I D L+DGRI+T +A K L+D +G ++++ + L L + I+ P Sbjct: 245 QIAPDILKPLADGRIFTARQALKNHLVDRIGYRDDLIRHLKRLMHVKEFEVIRYREPFLA 304 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 F + M + +W+P Sbjct: 305 ATGIFGSESPADSPMASAGRLAGMLTKSGPTMLYLWDP 342 >gi|148244822|ref|YP_001219516.1| peptidase S49 [Candidatus Vesicomyosocius okutanii HA] gi|146326649|dbj|BAF61792.1| peptidase S49 [Candidatus Vesicomyosocius okutanii HA] Length = 319 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 27/309 (8%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSW------------SSHVEDNSPHVARIAIRGQIE- 48 EFV + + L V YF + ++ ++ SP VA + + G I+ Sbjct: 15 EFVRQNKSKYRWRIIFSILFVGYFIFIYYIGISENGVLNTALKKESPFVAEVVLSGTIQS 74 Query: 49 ----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITE 102 D+ E IE + + ++A A+I+ ++SPGGS I++AI ++K + K Sbjct: 75 SGSIDADETIELLYSAFKLENAKAIILRINSPGGSPVQSSRIYKAIIRLKKQFDKKFYVV 134 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 V ++ AS Y I+ A++ I A E+S++GSIGV+ + KLG+ + + K Sbjct: 135 VEDVCASGCYYIASAADEIYADESSIIGSIGVIMSSFGAVDAIKKLGIKRRLYTAGKYKG 194 Query: 163 EPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 FS N K + +Q V+D + F+ V R K L G IW G +A K+ Sbjct: 195 LLDSFSPENEKILAHIQIHVLDKLHQNFINAVKAGRGNRLSKHKDLFTGLIWLGQDANKL 254 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 GLID + V + + +G+D + + L SI+ + + Sbjct: 255 GLIDGIADTNYVAKHI--IGIDSRV-----LFEKEKTLLEQLTEASINGIALAISDKLIS 307 Query: 282 TKVQGLWAV 290 + G V Sbjct: 308 KNLIGFLQV 316 >gi|307109116|gb|EFN57354.1| hypothetical protein CHLNCDRAFT_57181 [Chlorella variabilis] Length = 707 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 13/226 (5%) Query: 38 VARIAIRGQIED----------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 VA I G I S E+I ++ + ++ + A+++ + SPGG A A + ++ Sbjct: 365 VAVIRASGAITGTSNGTGGRITSGEVIAQLRSVKKNKNVAAVVLRIDSPGGEALASDLMW 424 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 R ++++ KPV+ + ++AAS GY ++ A + IVA ++ GSIGV+ +K +K Sbjct: 425 REVRELAKTKPVVASMADVAASGGYYMAMACSKIVAEPLTITGSIGVVTGKFNLKSLYEK 484 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LG + +++ + + P+ + +Y F + SR + + + Sbjct: 485 LGYAKENISKGKYAQLLAENKKFTPEEEALFDASATHAYESFRDKAALSRGMSVEAMQEV 544 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQ---SLYALGVDQSIRKIK 250 + GR+W+G A +GL+D VGG Q L D+ +R ++ Sbjct: 545 AQGRVWSGQRAATLGLVDAVGGISRALQLAKQAAGLAADEGVRVLE 590 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 95/253 (37%), Gaps = 29/253 (11%) Query: 40 RIAIRGQIEDSQE-----------LIERIERISRDDSATALIVSLSSPGGSAYAG----- 83 + + GQI + + L + +++ + D ++V + A Sbjct: 120 VLKVSGQIAEQPQGRFSQTVSLPALCDCLKKAALDPRVAGVVVKIE-----PLACGWGKL 174 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + + R ++ + E A Y ++ A + A ++ + G+ +++ Sbjct: 175 QELRRHVEFFRKSGKFSMAYMERAGEKEYYLASAFEEVYAPPSASLSLRGMSVSGTFLRG 234 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L+K+G+ + + K+ ++++ + + ++D + FV V+ SR Sbjct: 235 ALEKVGIEPEVRRIGVYKSAGDQLLRTDMSEAQREQLSALLDDIFGGFVADVAASRGKTV 294 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGG---QEEVWQSLYALGVDQSIRKI--KDWNPPK 256 ++ D ++ E K+ G + + EEV ++ G + + K+ + + + Sbjct: 295 EEVEEFLDSGVYDMEEFKRRGFVTDLLYECELEEVLKARTG-GKEDELPKVGYRKYKSVR 353 Query: 257 NYWFCDLKNLSIS 269 F +++ Sbjct: 354 PSTFGFTGKKAVA 366 >gi|87201072|ref|YP_498329.1| signal peptide peptidase SppA, 67K type [Novosphingobium aromaticivorans DSM 12444] gi|87136753|gb|ABD27495.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Novosphingobium aromaticivorans DSM 12444] Length = 625 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 12/281 (4%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVS 72 + + + +A + + G+I D + + I+ +++ D L++ Sbjct: 296 LPVYLADKPAAKDGSAIAVVTVAGEIVDGDAGPGVAGGDRIADLIDGVTQADDYAGLVLR 355 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGGS A E I A+++V+ + PV + +AAS GY +S + I A +++ GS Sbjct: 356 VDSPGGSVMASERIRAAVERVRAKGLPVAVSMGSVAASGGYWVSTPAQRIFAEPSTITGS 415 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV P + L + GV+ + V+++P+ +P +NP+ +MQ V+ +Y F+ Sbjct: 416 IGVFAVLPTFEQTLPQYGVTTEQVRTTPLSGQPDLLGGLNPQVSALMQGQVEQTYTRFLG 475 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS--IRKI 249 LV+++R ++ GRIW G A+++GL+D GG ++ + + Sbjct: 476 LVAKARGKSPADIDRIAQGRIWDGGTARQLGLVDQFGGLDDAVAWVAKQAKADKWHAEYV 535 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 +D P + ++ + + QGL A Sbjct: 536 EDEPSPVAQFLRQMETGEAPEARAHDLAGALAAQQQGLVAR 576 Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 23/195 (11%) Query: 51 QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVK-NRKPVIT----EVH 104 ++L IE + D A+++ L S GGSA +I A+ +V+ RKPV Sbjct: 81 RDLTRAIEAAATDKRIKAVVLDLESFGGGSAVHLSSIGAAMDRVRAARKPVFVRSLIYTD 140 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + ++ ++ V G + K +DKL ++ K K+ Sbjct: 141 D-----AMQLAAHASEAWVDPMGGVAITGPGGTMLFYKGLIDKLKANVHIFKVGTYKSAV 195 Query: 165 SPFSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRNI------PYDKTLVLSD--GRIWT 214 P+ +P+A + MQ V + + + V ++R D ++D G Sbjct: 196 EPYMRAQSSPEAREAMQAVYGAIWQNWQDEVRKARPKADLALATTDPAKWVADNGGD--A 253 Query: 215 GAEAKKVGLIDVVGG 229 A K GLID VG Sbjct: 254 AQAALKSGLIDRVGD 268 >gi|307293218|ref|ZP_07573064.1| signal peptide peptidase SppA, 67K type [Sphingobium chlorophenolicum L-1] gi|306881284|gb|EFN12500.1| signal peptide peptidase SppA, 67K type [Sphingobium chlorophenolicum L-1] Length = 633 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 10/270 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGS 79 +H N + + I G I D + + + + + + AL+V + SPGGS Sbjct: 304 AHKPANDGEIGVLTIAGDIVDGEAGPGTAAGDTIAKLLRKALAEKDLKALVVRVDSPGGS 363 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E I AI + K++ PV+ + +AAS GY +S +N+I A ++ GSIGV Sbjct: 364 VMASEKIRGAIMEAKSQGLPVVVSMGNVAASGGYWVSTPANMIFAEPDTITGSIGVFGIL 423 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K+GV+ VK++P+ +P P+ ++MQ V+ Y FV LV++SR Sbjct: 424 PSFEGTLAKIGVTTDGVKTTPLSGQPDVAGGTTPEFDRIMQMGVEDIYGRFVGLVAQSRR 483 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + ++ GR+W G A+++GL+D GG E+ L + + Sbjct: 484 KTPQQIDAIAQGRVWDGGTARQIGLVDRFGGLEDAIAEAAKLAKIDPAKAKPYRIAKEPD 543 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 F + ED + L Sbjct: 544 PFTQFVQSIVDREEEDDAGAPDGAMGRDLL 573 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 79/210 (37%), Gaps = 17/210 (8%) Query: 52 ELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAA 108 +++ ++ D A++++L + GG A + +A+ V+ +KPV + + Sbjct: 84 DIVAALDAAKDDKKVKAVVLNLDGFTGGGQV-ALGRVGKALDAVRAAKKPVFAYA-TIYS 141 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y ++ + V G Y K +D+LGV+ + K+ PF Sbjct: 142 DDSYQLAAHATESWVNPLGGVAITGRGGSGLYYKGLIDRLGVNTHVYRVGTYKSFVEPFT 201 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI--------PYDKTLVLSDGRIWTGAEA 218 + +P+A Q Q + D+ + + + V+ +R + G A Sbjct: 202 RTGQSPEAKQANQALADALWEDWRQEVATARPKAKLAAYVNDPAGLAQAAGGN--LAKAA 259 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 GLID +G + + + + K Sbjct: 260 LGAGLIDKMGDEAAFGARVAEVAGNAPDDK 289 >gi|257125230|ref|YP_003163344.1| signal peptide peptidase SppA, 67K type [Leptotrichia buccalis C-1013-b] gi|257049169|gb|ACV38353.1| signal peptide peptidase SppA, 67K type [Leptotrichia buccalis C-1013-b] Length = 594 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 20/286 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSL 73 + + +A I G I ++++IE+ ++ + +++ + Sbjct: 296 VQYEKTGNSRNGTIAVIYAEGSILYDANGVTEGTITPDNILQKIEKATQTKNLKGIVLRV 355 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +S GGSA A E I++ + K+K PV + + AAS GY IS A + A ++ GSIG Sbjct: 356 NSGGGSALASEVIYQELSKLK--IPVYVSMADTAASGGYYISTAGKKVFANSATITGSIG 413 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ P + DK GV S+ F+ ++ ++ + ++ +Y F V Sbjct: 414 VVSMLPKLYNAQDKYGVRSNSISKGRYSDINDSFAPLSEESRAKISQSMEETYKEFKSRV 473 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW- 252 S++R I + + G+IW G EAK + L+D + +EV + + + +++ Sbjct: 474 SKNRKIDENTLENYAQGKIWLGDEAKDIKLVDGIASLDEVIKIMAKDLNLRKNYAVENIY 533 Query: 253 ------NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 K+ ++S+ LE +IP K+ + +A+ N Sbjct: 534 LEEDFSQKLKSLSNMITAKFNLSAQLEKSIPQAKKAFNEYDFAMQN 579 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 97/214 (45%), Gaps = 13/214 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 +++ ++ I ++ ++++L + S+ E + + +++K K V + S Sbjct: 86 DILNSLDDIKNNNQVKGVVIALDTINLSSAKIEELIKKFEELKANNKKVYAFGAYITNS- 144 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ ++ +V ++ S+ + + Y K DK+GV+++ V+ K+ + Sbjct: 145 NYKLASIADEVVMVPSASA-SLDLTGYHYSDLYYKGLFDKIGVNMEVVRIGNYKSYGEEY 203 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRI--WTGAEAKKVG 222 +++ P+ + ++++ Y+ F+ V+++R + + + +G I T A+ G Sbjct: 204 IGNDMTPELRSELTRILENRYNKFITDVAKNRKVDKNALNNDIVNGNITNLTPFSARDKG 263 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 L+D + + L + +I I D+ + Sbjct: 264 LVDKLEQFSTFTERLNI--REDNIADITDYYQKR 295 >gi|284032927|ref|YP_003382858.1| signal peptide peptidase SppA, 36K type [Kribbella flavida DSM 17836] gi|283812220|gb|ADB34059.1| signal peptide peptidase SppA, 36K type [Kribbella flavida DSM 17836] Length = 552 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 16/271 (5%) Query: 35 SPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPGGS 79 P VA I + G I S + + ++ DD A+++ + SPGGS Sbjct: 263 KPTVAVIRVNGGITVGRSSGGGPLGSPRSGSDTITAALRAVAADDKVKAVVLRIDSPGGS 322 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A +AI + ++++ KPVI + +AAS GY ++ ++++VA ++ GSIGVL Sbjct: 323 YVASDAIRHEVLRLRSTGKPVIASMGSVAASGGYFVAMPADVVVAQPGTITGSIGVLSGK 382 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 V+ L ++G++ ++V S E +P+ + +++ +D Y FV +E R Sbjct: 383 GVVRDALGRIGITQQAVSEGTNARMYSAQEEFSPQQWERLEETLDRIYADFVAKAAEDRG 442 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + D+ L+ GR+WTGA+A + L+D +GG E Q A P + + Sbjct: 443 LGVDELEALARGRVWTGADAHRHQLVDELGGFEHALQLACARAGLDRDHIAVTAAPHRTF 502 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 S L T PL L+A Sbjct: 503 LDRLRPPTSTDDLAATTQPLTVDGLTTSLYA 533 Score = 99.5 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 7/222 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +EL+ + + + D+ L+ + P S + + A+ + K + + Sbjct: 35 RELVVGLRKAAEDEQVVGLVAHVGGPALSLAQVQELRTAVVGFRAAGKRAVAWSESFGEA 94 Query: 110 AG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G Y ++ A + I + +G GV Q +V+ LDK GV + K K Sbjct: 95 GGGTVPYYLATAFDEIWVQPSGELGITGVSVQATFVRGALDKAGVIPQFGKRREYKTAVD 154 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 F+E + A +M + +S+Y V ++ R + ++ L D ++ GL Sbjct: 155 TFTEKEMTGPAREMAARLAESAYEQLVEGIAGERELSVERVRELVDNAPLAAEAGREAGL 214 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 +D +G + +V+ L + ++ ++ D + Sbjct: 215 VDRLGYRSDVYDELEKRFGPTTALLVERYHRRGPRTLHDALD 256 >gi|332187455|ref|ZP_08389193.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. S17] gi|332012616|gb|EGI54683.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. S17] Length = 620 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 10/246 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGG 78 ++ + + + I G I D + + + AL+V + SPGG Sbjct: 299 ANPLPSKGDAIGVLTIAGNIVDGDAGPGTAAGDTISKALLDGLAKKKLKALVVRVDSPGG 358 Query: 79 SAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 S A E I +AI + K +K PV+ + +AAS GY +S ++II A ++ GSIG+ Sbjct: 359 SVLASEQIRQAILEAKRQKLPVVVSMGGLAASGGYWVSTPADIIFAEPGTITGSIGIFGL 418 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P + L K+GV+ VK++P+ +P P ++Q +++ Y F+ V++SR Sbjct: 419 IPSFENTLAKIGVTTDGVKTTPLTGQPDVLGGFTPMLDTILQAGIENGYRQFLTRVAQSR 478 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ +K ++ GR+W G A+++GLID G + ++ K Sbjct: 479 HMTPEKVDTIAQGRVWDGGTARQIGLIDRFGNLSDAVAEAARRAKLDPANIHAEYLEKKP 538 Query: 258 YWFCDL 263 + +L Sbjct: 539 GFAAEL 544 Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 86/210 (40%), Gaps = 15/210 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGS-AYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 ++++ I+ D L++ L + GG+ A + + A+ + + KPV+T Sbjct: 78 RDVVRAIDAARDDARVKVLVLDLDAFGGAYPAAIQEMGDALARFRKGGKPVLTYATAY-T 136 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y ++ ++ I +G Y K +DKLGV+ + K+ P+ Sbjct: 137 DGAYRLAAHASEIWVNPLGGTLFMGPGGNQLYYKGLIDKLGVTAHVYRVGKFKSFVEPYI 196 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP--------YDKTLVLSDGRIWTGAEA 218 ++ +P A Q + + + + V+++R D+ ++ ++G I Sbjct: 197 RTDQSPDARAASQALYGTLFAQWRESVAKARPKAQIDGFLTQPDRAVLAANGNI--AEAN 254 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 K GL+D +G + + + + ++ + Sbjct: 255 LKAGLVDRLGDRMAFGKRVAEIAGVENGKP 284 >gi|87306471|ref|ZP_01088618.1| endopeptidase IV; signal peptide peptidase [Blastopirellula marina DSM 3645] gi|87290650|gb|EAQ82537.1| endopeptidase IV; signal peptide peptidase [Blastopirellula marina DSM 3645] Length = 349 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 133/306 (43%), Gaps = 21/306 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN--------SPHVARIAIRGQIEDSQELIE 55 L + +++ + T YF+ V + + +A I + G I + + I Sbjct: 31 WLGLMFAGLIIIVQLAATAQYFNEEDGVSEKYYSGDKMATDKIALIRVEGLIMEGEGYIR 90 Query: 56 -RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGY 112 +I+ +D + A+++ + SPGGS A + I+ + +++ + P++ + A S GY Sbjct: 91 NQIDLARKDKNVKAIVLRVDSPGGSVSASDYIYHHLNELREDREIPLVVSMGSSATSGGY 150 Query: 113 LISCA----SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 ++ A ++I A T++ GSIGV+ + V L + + S+ S K S Sbjct: 151 YVAMAVGDEKDVIFAEPTTITGSIGVIIPHYDVSGLLAEYHIKDDSIASHERKQMLSMTR 210 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLID 225 + +++Q +V+ + F+ +V R DK L+ G ++ +A ++GL+D Sbjct: 211 TMPEDQRELVQGLVNDMFERFLDVVKTGRPAYVEDPDKLKELATGEVYLTDQAIELGLVD 270 Query: 226 VVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 VG E + L +D ++ + P + + + + S ++ E + + Sbjct: 271 KVGFVEAAIERAAELAKLDAKKTRVVAYKKPVSLF--GIGSASAANPTESLMNAVLNVTS 328 Query: 285 QGLWAV 290 + + Sbjct: 329 PKAYYL 334 >gi|257468386|ref|ZP_05632480.1| protease IV [Fusobacterium ulcerans ATCC 49185] gi|317062659|ref|ZP_07927144.1| protease IV [Fusobacterium ulcerans ATCC 49185] gi|313688335|gb|EFS25170.1| protease IV [Fusobacterium ulcerans ATCC 49185] Length = 584 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 12/241 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQI-EDSQE-----------LIERIERISRDDSATALIVSLS 74 S +A I G + DS LIE I + +DD +++ ++ Sbjct: 302 LGSSTNKRKDKIALIYAEGTMYMDSPSGGISGNTTPNVLIEEINKALKDDGVKGIVLRIN 361 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA + I I + KP+ + +AAS GY ++ + I A + SL GSIGV Sbjct: 362 SPGGSALSANIISNKIIEANKIKPIYVSIGGVAASGGYYLAASGEKIYADKESLTGSIGV 421 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + P +K L + +++ VK S + + + Y+ F+ VS Sbjct: 422 VSIIPNIKKMLGNVSINVDEVKKGEYSDIYSMVKDFDADKRDKLYASNLKVYNEFIDTVS 481 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + ++ G++W G EA ++GL+D +GG E+ + L ++ N Sbjct: 482 FGRKLNRQHVEKIAQGKVWLGEEALELGLVDEIGGLEDTVKGLADDLKLVEYDTVEIINA 541 Query: 255 P 255 P Sbjct: 542 P 542 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 107/268 (39%), Gaps = 40/268 (14%) Query: 3 FVLKKIKTRYV---MLSLVTLTVVYFSWSSHVEDNSPHV---ARIAI------------- 43 FV+K+I + ++ + +V ++V F + +E + + + I + Sbjct: 17 FVIKEIFSFFIKAFLFLVVIFSIVAFFAKTTLEKDKVVIEKGSYIEVDLSKEYKEKGKNL 76 Query: 44 ----RGQIEDSQELIERIERISRDDSATALIVSL-----SSPGGSAYAGEAIFRAIQKVK 94 RGQ + +++ + + RD + +++ L +S E + + + +K Sbjct: 77 PGFLRGQDTNFFSMLKTFDYLERDSNIKGVVLKLDNLSLNS-----AQVEELGKKLDSLK 131 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAE--TSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K + MA + Y ++ S+ I ++ V G + Y K D++G+ Sbjct: 132 KNKKEVYSYMTMADNRNYSLAIKSDHIFMPPAMSAPVNITGYYGELMYYKLLADRMGIEF 191 Query: 153 KSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSD 209 + KA ++ ++ + + ++ + + Y FV ++ R + +D + + Sbjct: 192 NVIHVGDYKAYGENLTKEHISKEYKENIERMYNKKYANFVNNITVERKVNHDFINEKILN 251 Query: 210 GRIWTGA--EAKKVGLIDVVGGQEEVWQ 235 G + + KK+ LID E + Q Sbjct: 252 GDLMASEPNQMKKLNLIDEFMYYENLKQ 279 >gi|320103655|ref|YP_004179246.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] gi|319750937|gb|ADV62697.1| signal peptide peptidase SppA, 36K type [Isosphaera pallida ATCC 43644] Length = 369 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 19/290 (6%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATA 68 VV + V VA I + G I ++ + E++ +RD + A Sbjct: 69 VVAVAVEPGVPVECAKVALIDLDGLIANAPMAGFFSLGDNPVATVSEKLAAAARDPTIMA 128 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 ++V ++SPGG A +A++R +Q + + RKP + + ++ A GY ++ + IVAA Sbjct: 129 VVVRINSPGGGVAATDALWREVQSFRSRTRKPTVAAIIDVGAGGGYYLAAGCDRIVAAPG 188 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 +++G IGV+ VK + + V +S+K+ S ++ ++ Q++Q++ D + Sbjct: 189 AIIGGIGVVLNLYNVKDLMAQFNVFSQSIKAGDKIDLGSSVEPLDDESRQLLQEMADEYH 248 Query: 187 HWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 F ++V R + + DGRI + A ++GLID +G E+ + L Sbjct: 249 ERFKQVVRRGRPGLTPQAEPLAFDGRIMSARRALELGLIDEIGHLEDALATARTLAGVPD 308 Query: 246 IRKI--KDWNPPKNYWFCDLKNLSI-SSLLEDTIPLMKQTKVQGLWAVWN 292 + + + N I + LL +IP +++ K+ G +W Sbjct: 309 AVPVLFRRRGDAAYSLYAVTPNTPIQNQLLPFSIPGVERAKLPGFLYLWQ 358 >gi|325262473|ref|ZP_08129210.1| peptidase, U7 family [Clostridium sp. D5] gi|324032305|gb|EGB93583.1| peptidase, U7 family [Clostridium sp. D5] Length = 335 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 20/264 (7%) Query: 34 NSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPGGS 79 P+V +++ G IE L++ I+ + D + + +++ + SPGG+ Sbjct: 60 TEPYVGIVSVYGTIEPQTRTGTFDQPQSYQHLALMDYIDAMMYDPNNSGILLDVDSPGGT 119 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y G ++ I + ++ +PV T ++ ASA Y I+ S+ I A ++++ GSIGV+ Sbjct: 120 TYEGVELYDKIVEYRDATGRPVWTYMNHYGASAAYYIAAPSDRIGANKSTMTGSIGVIMS 179 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + +KLG+ SV + K SP N + +++ QD++ Y FV V+E R Sbjct: 180 GYDLSGLYEKLGIKYYSVTTGDNKDMSSP----NEEQLEIYQDIIAEEYDRFVGAVAEGR 235 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +P L+DGR ++ +A GLID + E++ + + + + PP Sbjct: 236 GMPDKAVRELADGRPYSAQQAVDNGLIDEITTFEDLAVEMQYEVGNTTFYQPDIIEPPLA 295 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQ 281 F + + S ++ L ++ Sbjct: 296 SLFGKAEEILPKSDMQVLSELTEK 319 >gi|154251181|ref|YP_001412005.1| peptidase S49 [Parvibaculum lavamentivorans DS-1] gi|154155131|gb|ABS62348.1| peptidase S49 [Parvibaculum lavamentivorans DS-1] Length = 300 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 22/278 (7%) Query: 35 SPHVARIAIRGQIEDSQELIERIE---------RISRDDSATALIVSLSSPGGSAYAGEA 85 P VA + + G I SQ L + + A+ + ++SPGGS Sbjct: 24 KPVVAVVRLSGTIGPSQPLRGGLNLAAVAAPLEAAFSMRNVKAVALLINSPGGSPVQSSL 83 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I++ I+ + K PV ++AAS GY+I+CA++ I A E+S+VGSIGV+ Sbjct: 84 IYKRIRALAEEKSVPVYAFAEDVAASGGYMIACAADEIYADESSIVGSIGVVSAGFGFTG 143 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-D 202 ++KLGV + + KA PF + V+ ++ + + F +LV +R Sbjct: 144 LIEKLGVERRVHTAGESKAMLDPFQPEREEDVRRLEALQLDVHENFKKLVRGARGERLKA 203 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP-------- 254 + G W G A + GLID +G +SL+ G + +R + P Sbjct: 204 DDPAIFSGEFWAGQGAVERGLIDGLGDVRSKMRSLF--GENVKLRLVSPRTPWWRPGGGI 261 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + + + + L+ + + LW+ + Sbjct: 262 ASSRFGGLSEGFGAGFASQIGEGLIAAAERRSLWSRFG 299 >gi|163852521|ref|YP_001640564.1| peptidase S49 [Methylobacterium extorquens PA1] gi|163664126|gb|ABY31493.1| peptidase S49 [Methylobacterium extorquens PA1] Length = 286 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 19/271 (7%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + P VA + + G I + +ER +A+ + ++SPGGS Sbjct: 19 ETPPRVAVVRLSGAIGAVSPIRAGLSIGTVAPSLERAFTMPGLSAVALVINSPGGSPVQS 78 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I+R I+ + K V V + AAS GY+I+CA++ IVA SLVGSIGV+ Sbjct: 79 HLIYRRIRALAAEKEIKVFAFVEDAAASGGYMIACAADEIVADPASLVGSIGVVSAGFGF 138 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 ++++G+ + KA PF NP + ++++ F LV E R Sbjct: 139 DRLIERIGIERRVHTQGEAKAMLDPFRPENPLDIARLKEIQADVQALFSGLVRERRP-TL 197 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 D + L G +WTG +A ++GL+D +G ++ Y VD ++ + W Sbjct: 198 DASRDLFTGAVWTGRQALELGLVDAIGDLRGTLRARYGEKVD-----LRLVAENRGSWLA 252 Query: 262 DLKNLSISSLLEDTIP--LMKQTKVQGLWAV 290 L + +P L+ + + WA Sbjct: 253 RLLRRAGPGQTAAGLPDALIAAVEERAAWAR 283 >gi|52548335|gb|AAU82184.1| periplasmic serine protease [uncultured archaeon GZfos11A10] Length = 381 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 14/265 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQI-----------EDS 50 I +M++++ +++ S + +A + ++G + S Sbjct: 88 FSYIILVLLMITIIGVSLALILGGSDLPGLYSTGDQIAVVYVQGVMITGGLPDGFGFATS 147 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + + + I + D S A+++ ++SPGGS A + I I+K K+ KPV+ + ++AASA Sbjct: 148 ESICKNIRLAADDTSVKAIVLRVNSPGGSPAAAQEIAHEIKKAKSEKPVVVSMGDVAASA 207 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y IS ++ I+A ++ GSIGV++ + + D+ G+ KS K + + Sbjct: 208 AYYISAPTDRIIANPDTITGSIGVIWIFENKSGYYDEEGIEHWVAKSGEFKDMGGDWRNL 267 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 K ++VV ++ FV V+ RN+ ++ L LSDGR++TGA+A +GL+D G Sbjct: 268 TEKEKIYAEEVVMDAFSRFVDEVAVGRNMSREQVLNLSDGRVYTGADAIDLGLVDETGNI 327 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPP 255 + LG +IK N P Sbjct: 328 YDAIDIAAELGNCTGEPEIKYMNKP 352 >gi|120598431|ref|YP_963005.1| putative periplasmic protease [Shewanella sp. W3-18-1] gi|120558524|gb|ABM24451.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. W3-18-1] Length = 338 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 13/234 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + + + V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 85 TEGDTSKGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGY 142 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P Sbjct: 143 GLASSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFN 202 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + K + F E + Q Q+ ++ ++ F VS+ R P Sbjct: 203 RLLKKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQEELEETHVLFKAFVSKYR--PEL 260 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G W G +A ++GL+D + ++V SL D+ + K++ K Sbjct: 261 NLEKVATGEHWYGQQAIELGLVDEILTSDDVVMSLAK---DRKVYKLRYQVKKK 311 >gi|307110504|gb|EFN58740.1| hypothetical protein CHLNCDRAFT_34059 [Chlorella variabilis] Length = 610 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 4/218 (1%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHEMAASAG 111 +I+ + +D + A ++ + SPGGSA A EAI R + V KPV+ + +AAS G Sbjct: 323 VIKALRAARQDPAVKACVLRVDSPGGSAAASEAIHREVSLVVGAGKPVVVSMGNVAASGG 382 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ IVA +L GSIGVL L + GVS++ V A SP + Sbjct: 383 YYIATAASKIVAQPGTLTGSIGVLAGKLVCDAALREYGVSVEVVTVGRSAAAMSPLTPFT 442 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + +++ +D++Y F + V+E R + + L+ GR+WTG +A + GL+D +GG + Sbjct: 443 RHQRRRVEEFMDATYALFKQRVAEGRGLKPEAVAKLAKGRVWTGEQAVEAGLVDQLGGLQ 502 Query: 232 EVWQSL---YALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 + L +++ +++ P K L Sbjct: 503 AAVELAKREAGLPLEEGAVELRQAYPEKKSRLAAALKL 540 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 18/175 (10%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKVKN----RKPVITE 102 QE + D L+ L GG + + A+ + R P + Sbjct: 69 QEATGALRAAGGDPRVKGLLALL---GGQTGMGLAQVQELRDAVADFRQAAAGRAPTVAY 125 Query: 103 VHEMAASAG-----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + ++ A +++ LV G+ P+ + LD+ + Sbjct: 126 ADAFGEGGAGGTAAFYLASAFDVVAVQPGGLVSVTGLAAATPFARGLLDRWRIVPVFFAR 185 Query: 158 SPMKAEPSP--FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 K+ + + + + D + S VR ++ R + ++ DG Sbjct: 186 EEYKSAANFLRYRGSTRAEREALGDRLASLGAQVVRGIAAGRGLSEEQVRRAIDG 240 >gi|78189660|ref|YP_379998.1| peptidase S49, protease IV [Chlorobium chlorochromatii CaD3] gi|78171859|gb|ABB28955.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium chlorochromatii CaD3] Length = 601 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 11/273 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAY 81 S +A I + G I S + ++ +E + S A+++ + SPGG A Sbjct: 299 SSTSDAIAVITMSGPIMRSVDNLDDGIDVATMQHSLEAALENKSVKAIVLRIDSPGGEAI 358 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A I + I +K ++ + +AAS GY+++ IVA ++ GSIGV P + Sbjct: 359 ASADILQMINAAATKKTLVVSMSGVAASGGYMVALGGKTIVAHPLTITGSIGVYALKPTI 418 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + +K+G+ + + SPF+ + +A Y+ F+ V+ SR + Sbjct: 419 QGLAEKVGLQREVITRGRFADATSPFTPLEGEAYNKFVASAGDVYNDFISKVATSRRMKV 478 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKDWNPPKNYWF 260 ++ GR+WTG+ AK+VGL+D +GG + + G+ + P + W Sbjct: 479 TAVDSVAGGRVWTGSRAKQVGLVDRMGGLFDALALAKERAGISKDKEPTILLYPLQQGWL 538 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L + + + I V + P Sbjct: 539 QSLLGGATLNSVTKAIATALLGNVLPINVEQQP 571 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 111/254 (43%), Gaps = 31/254 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------QEL 53 ++++ L + +++++ S + V + + G++ + QE+ Sbjct: 21 FLVVPLFIVVALFWAFRSSHDMPDRFVLVVPLSGKLAEVNNERSSLPFMPSQGDLSLQEV 80 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAG--EAIFRAIQKVKNRKPVITEVHEMAASAG 111 + + ++D+ + +++ L G A + A+ V+ + ++ A + Sbjct: 81 LFVLHEAAKDEQVSEVLLQLD--GVEAAPAKIAEVRAAVADVRRKGKKVSAFLYRAEDSD 138 Query: 112 YLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 YL++ A++ I+ + S+ G+ + + L+KLG+++++ + K+ PF+ Sbjct: 139 YLLATAADTIIMQRGA---SLLLDGLKAESLFYTGTLNKLGITVQAAQWKEYKSGIEPFT 195 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLID 225 + + + + ++D Y+ ++ VSE R I + + + + AK +GL+D Sbjct: 196 RTSASKEYREQINMLLDDVYNNYLSAVSERRKISRSAFEAIINNEALLSAERAKALGLVD 255 Query: 226 VVGGQEEVWQSLYA 239 + +V +S+ Sbjct: 256 RIATFWDVERSMTK 269 >gi|294785545|ref|ZP_06750833.1| protease IV [Fusobacterium sp. 3_1_27] gi|294487259|gb|EFG34621.1| protease IV [Fusobacterium sp. 3_1_27] Length = 551 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 128/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAVINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EVPIYISMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 391 LYPEFTETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G +AK+ GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGNQAKENGLVDELGSLNDCIDSLAK-DLELKDFKLTYIRGRK 509 Query: 257 NYWF--CDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + I ++K + L+ Sbjct: 510 SIMEIVSAMKPQFIKSDIIGKIEMLKSYSNKILYY 544 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 13/158 (8%) Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI----GVLFQYP 139 E I +K+ K +I + Y ++ +N I T S G ++ P Sbjct: 104 EEIKEIFEKLSVDKEIIA-IGTTFDEYSYQVALLANKIYMLNTKQ--SCLYFRGYEYKEP 160 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 Y K L LGV++ ++ K FS +++ + + + ++ ++ + F+ LV E R Sbjct: 161 YFKNILATLGVTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFINLVKEKR 220 Query: 198 NIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQEEV 233 + T + G + +A ++GLID + EE+ Sbjct: 221 KVDI--TNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|73668088|ref|YP_304103.1| signal peptide peptidase A [Methanosarcina barkeri str. Fusaro] gi|72395250|gb|AAZ69523.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Methanosarcina barkeri str. Fusaro] Length = 394 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 15/266 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN---SPHVARIAIRGQI-----------ED 49 + + +++++ +++V S + V N S VA I I+G I Sbjct: 93 WMPYLLVLLALITIILVSLVLISSNFGVGGNLGSSEKVAVIYIQGTIFSGNVAEGLGYAT 152 Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAA 108 S+ + I R + DD A+++ + S GGS A + I I+K + + PV+ + ++AA Sbjct: 153 SEAIAGDIRRAAADDGVKAIVLRIDSSGGSPAAAQEIVEEIKKAQAKGIPVVVSMGDLAA 212 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y IS ++ I+A ++ GSIGV++ + ++ GV KS MK S + Sbjct: 213 SAAYYISAPTDYIIANPSTNTGSIGVIWVFQNNSLSNEETGVDYYVAKSGEMKDMGSTWR 272 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 + + + VV SY FV VSE RN+ + L+DGRI+TG AK++GL+D G Sbjct: 273 GLTDQEKEYADSVVMDSYENFVTEVSEGRNMSRGEVKALADGRIYTGTRAKELGLVDGFG 332 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNP 254 + LG K++ N Sbjct: 333 NIYDAIDKAAELGGISGEPKVEYMNK 358 >gi|254172566|ref|ZP_04879241.1| protease IV [Thermococcus sp. AM4] gi|214033495|gb|EEB74322.1| protease IV [Thermococcus sp. AM4] Length = 329 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 116/242 (47%), Gaps = 7/242 (2%) Query: 31 VEDNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + +A + I G I+ L + +E++ +DDS +++ + SPGG A I+ Sbjct: 80 INATNSTIAVVPIFGVIDGQTALNTVTTLEKLMKDDSVGGVLLWIESPGGDVGAVREIYH 139 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++ +K +KPV+ +AAS GY I+ ++ I+A + VGSIGV++ + + Sbjct: 140 EVEVLKAKKPVVAYTGGIAASGGYYIAVGTDRIIADPLAEVGSIGVIYVHFNLADNYASN 199 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + K+ P K + + + + + ++D+ + F++ VS R++ ++T + Sbjct: 200 GIKVDVFKTGPHKDMGAEWRALTEYERKKIWGMIDAYFQSFLQAVSMGRDMTLNETRKYA 259 Query: 209 DGRIWTGAEAKKVG--LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 G W A +V L+D G + Q L L +S +P ++Y L + Sbjct: 260 TGETWL---AVEVNGTLVDETGNFQTAVQELEKLMGVESAEVKVYGSPTQSYSLGVLGDE 316 Query: 267 SI 268 ++ Sbjct: 317 AL 318 >gi|51473588|ref|YP_067345.1| protease [Rickettsia typhi str. Wilmington] gi|51459900|gb|AAU03863.1| probable protease [Rickettsia typhi str. Wilmington] Length = 304 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S D+ VA + + G I + L E IE+ + AL + ++SPG Sbjct: 30 FASVFGDSKEVVAVLRLSGVIGKVSTVQSGLTLESLNELIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + KN+ V + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAKKNKIKVYSFIEDMAASGGYWLACSGDKIYALPSSVIGSIGVI 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + KA PF +N +++++D+ Y F+ V E Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKAVLDPFKPINKDDLKIIKDLQKQVYEHFIEYVKE 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + +L +G W G A GLID +G V + + + + Sbjct: 210 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVMKEKFGDNIKF------QYLC 263 Query: 255 PKNYWFCDLKNLSISSLLEDTI 276 K W + L+ED + Sbjct: 264 AKQPWLKKKLGMGSKVLIEDLV 285 >gi|300782067|ref|YP_003762358.1| serine protease [Amycolatopsis mediterranei U32] gi|299791581|gb|ADJ41956.1| serine protease [Amycolatopsis mediterranei U32] Length = 281 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 13/219 (5%) Query: 33 DNSPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAY 81 + VA + + G I S + + R D A+ + ++SPGG+ Sbjct: 19 ERKDVVAVVKLHGVITPSPSPLARGAINLAAVETALTRAFGHDRLKAVALLVNSPGGAPT 78 Query: 82 AGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + I+++ + K PV+ ++AAS GY ++CA++ I A TS+VGSIGV+ Sbjct: 79 QSGLVAERIRQLADEKGVPVLAFCEDVAASGGYWLACAADEIYAHRTSMVGSIGVISGGF 138 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L++ G+ + + K+ PFS P+ V+ ++ + + FV V E R Sbjct: 139 GFTGLLERFGIERRLHTAGANKSRLDPFSPEKPEDVEWLKKMHTQLHELFVNWVKERRGD 198 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 T L G +W GA+A +GLID +G ++ Y Sbjct: 199 RLTDTEDLFTGDVWLGAKALDLGLIDGLGSLRQIITERY 237 >gi|18977955|ref|NP_579312.1| protease IV [Pyrococcus furiosus DSM 3638] gi|18893729|gb|AAL81707.1| protease iv [Pyrococcus furiosus DSM 3638] Length = 329 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 116/229 (50%), Gaps = 3/229 (1%) Query: 32 EDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 E + +A + I G I++ + E+++++E I D S +++ + SPGG AI++ Sbjct: 81 ETANGSLAIVPIFGLIDENMALEVVKKLEVIKSDPSIRGVLLWIDSPGGYIGPVRAIYKE 140 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++++ KP++ + A S GY I+C ++ I+A + VGSIGV++ + + + + G Sbjct: 141 VKELAYIKPIVAYISGYATSGGYYIACGADKIIADPYAQVGSIGVIYVHFNAQKYYEMNG 200 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++ K+ P K + + + P+ +++Q +D + F+ +V E RN+ K +D Sbjct: 201 IEVEVFKTGPYKDMGADWRGLKPEEREIIQKQIDVYFKTFLDVVMEGRNLNETKVKEYAD 260 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 GR W E LID +G + + L +S + P N+ Sbjct: 261 GRAWFAYE-VNGTLIDDIGDLQYAIEETKKLANLKSANIVIFDVKPSNF 308 >gi|282879549|ref|ZP_06288280.1| signal peptide peptidase SppA, 67K type [Prevotella timonensis CRIS 5C-B1] gi|281306497|gb|EFA98526.1| signal peptide peptidase SppA, 67K type [Prevotella timonensis CRIS 5C-B1] Length = 589 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 15/216 (6%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLS 74 VY+++ + V++ I G I Q ++ + +E ++ DD +++ ++ Sbjct: 302 IAVYYAYGNIVDN--------PITGGIFGGQHAIVGPDVCKDLEALADDDDVKGVVLRIN 353 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSAYA E ++ I ++K +KPV+ + MAAS GY +SC +N IVA T+L GSIG+ Sbjct: 354 SGGGSAYASEQMWHQIAELKKKKPVVVSMGGMAASGGYYMSCNANWIVAQPTTLTGSIGI 413 Query: 135 LFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 P L KLG+ VK++ S +N + + + +D Y+ F + V Sbjct: 414 FGMIPDRSQLLTQKLGIKFDEVKTNRNALMGSNARPMNEEEIGYLTRYIDRGYNLFRKRV 473 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ R + ++ ++ G ++ G +A K+ L+D +GG Sbjct: 474 ADGRKMSINQVEEIAQGHVFLGQDALKIKLVDELGG 509 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 93/254 (36%), Gaps = 33/254 (12%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QELI 54 +L ++++ + S + + V + + G +++ E++ Sbjct: 24 ILGVMSIIGMITSTQATQNVSKNSVLVLNLSGTLQEQSDDNVFGLFAQDSFGSLGLDEIL 83 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNR-KPVITEVHEMAAS 109 I++ D + + S G A + I A+ K K ++ + Sbjct: 84 SAIKKAKETDKIKGI--YIES--GMFVADYASRQEIRNALLDFKKSGKKIVAYADSYS-Q 138 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS- 168 Y I+ ++ + ++ G+ + ++K L K G+ + +K K+ F+ Sbjct: 139 GNYYIASVADKVFLNPQGMIDWHGIGAEPMFLKDLLAKFGIRFQVIKVGKYKSATESFTA 198 Query: 169 -EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVGLID 225 +++ + Q ++ + + VS+SR I DK +D I + L+D Sbjct: 199 DKMSEPNREQTQAYINGLWANVCQAVSQSRKISVDKLNEYADSLIAFNNPKDYVSAKLVD 258 Query: 226 VVGGQEEVWQSLYA 239 + +EV + + Sbjct: 259 GLLYTDEVKKEVKK 272 >gi|153853725|ref|ZP_01995081.1| hypothetical protein DORLON_01072 [Dorea longicatena DSM 13814] gi|149753475|gb|EDM63406.1| hypothetical protein DORLON_01072 [Dorea longicatena DSM 13814] Length = 327 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 117/253 (46%), Gaps = 20/253 (7%) Query: 34 NSPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + ++A + + G I++ + I+ + D + +++ + SPGG+ Sbjct: 54 SEDYIAIVRVEGTIQEQSGSSILEASSGYQHDSTMNYIDELMDDSNNKGILLYVDSPGGT 113 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y E +++ +++ K ++P+ + AAS GY++S AS+ I A + GSIGV+ Sbjct: 114 VYESEELYQKLKEYKETTKRPIWDYMAHYAASGGYMVSMASDKIYANSNTTTGSIGVIMS 173 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + KLG+ S+ S K S+ + + + QD ++ +Y FV +V++ R Sbjct: 174 GYDMSGLYKKLGIRYVSITSGKNKDS----SKFTDEQIAIYQDQINEAYEEFVNIVADGR 229 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ + L+DGR +T +AK GLID + ++ ++ + +++ Sbjct: 230 DMSVEDVKKLADGRTYTAKQAKNNGLIDEISLYPDMKDAMSKKLGTSTFYEMESDEGLLQ 289 Query: 258 YWFCDLKNLSISS 270 F ++L S Sbjct: 290 SLFSKAESLVPKS 302 >gi|157961477|ref|YP_001501511.1| putative periplasmic protease [Shewanella pealeana ATCC 700345] gi|157846477|gb|ABV86976.1| Peptidase S49 domain protein [Shewanella pealeana ATCC 700345] Length = 342 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 10/216 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 VE+ P V + +G I+ + E I I I+ D +IV++ S GG + Sbjct: 88 DQVEEAEPKVFVVDFKGSIDAGEVASLREEISAILAIA--DKGDEVIVNVESGGGMVHGY 145 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ P+ V ++AAS GY+++C +N I +A ++VGSIGV+ Q P Sbjct: 146 GLASSQLDRLRQAEIPLTICVDKVAASGGYMMACVANKIYSAPFAIVGSIGVVAQVPNFN 205 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + K + F E + + Q ++ ++ F +++ R P Sbjct: 206 RLLKKHDIDYEQHTAGDFKRTLTIFGENTDEGREKFQKELEETHVLFKAFIAKYR--PDL 263 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ G W G +A ++GL+D + ++V L Sbjct: 264 DLDKVATGEHWYGQQAIELGLVDEIATSDDVIMKLA 299 >gi|84499786|ref|ZP_00998074.1| peptidase, family S49 [Oceanicola batsensis HTCC2597] gi|84392930|gb|EAQ05141.1| peptidase, family S49 [Oceanicola batsensis HTCC2597] Length = 285 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 14/240 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAY 81 V P VA I ++G I + + IER R A+ ++++SPGGS Sbjct: 25 DRVMKRPPLVAVIRLQGMISSGPRGPLSDEAMAPVIERAFRRGKPAAVALAINSPGGSPV 84 Query: 82 AGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I I+++ K PV V + AAS GY ++CA+ I A +S+VGSIGV+ Sbjct: 85 QSSLIAARIRRLSEEKSVPVYAFVEDAAASGGYWLACAAEEIHADRSSVVGSIGVIAASF 144 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L + GV + S K+ PF + V ++ ++ + F+ V R Sbjct: 145 GAHVLLARQGVERRVHTSGKSKSMLDPFQPEKEEDVARLKSLLTDIHAAFIDHVKTHRGG 204 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ L G W +AK++GLID VG V + + V + + + P + + Sbjct: 205 KLKESEDLFTGEFWLAEKAKELGLIDHVGHLVPVMKEKFGDKV-----RFRKYGPRRGWL 259 >gi|224437564|ref|ZP_03658522.1| hypothetical protein HcinC1_06345 [Helicobacter cinaedi CCUG 18818] gi|313144017|ref|ZP_07806210.1| protease IV [Helicobacter cinaedi CCUG 18818] gi|313129048|gb|EFR46665.1| protease IV [Helicobacter cinaedi CCUG 18818] Length = 267 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 130/269 (48%), Gaps = 7/269 (2%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSP 76 + L V+ E++ P+VA++ + I +S+ + +++I +++ +++ + SP Sbjct: 2 FIVLFVIVV-GGDESENDPPNVAKLHLTMPIYESESFAQAVKKIKENENIKGVLLVIDSP 60 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GG A I I+ + + PVI V AS Y +N I A +L+GS+GV+F Sbjct: 61 GGLVGASIEIADMIKDLAQKMPVIAYVQGSMASGSYYAGMYANEIYANRGALIGSVGVIF 120 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ + K+GV + +K+ K + + + + Q +++++ Y F V ++ Sbjct: 121 SGVNIEELMQKVGVKEQGIKAGAFKEIGTMTRKWSDEERQFLENLLQEQYAMFYNDVLQA 180 Query: 197 RN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSIRKIKDWN 253 R + ++G++++ +A ++GLID V + ++L +G+D+ I KD Sbjct: 181 RGEKLKSKDYHDFAEGKVFSANKALELGLIDKVESMQGAMEALRQKVGLDKLIWLEKD-- 238 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 + L + S +L ++P +K + Sbjct: 239 -KFETYMDKLFDTMNSKILSLSLPSLKAS 266 >gi|124515256|gb|EAY56766.1| Signal peptide peptidase, SppA [Leptospirillum rubarum] Length = 331 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 19/278 (6%) Query: 35 SPHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSPGGS 79 + + I G I D + + + + D +++ + S GGS Sbjct: 47 RDKLLLVPINGFIGDQTSRGIPFLGGRDDTVTRIRATLRKAAEDPRVRGIVLLIDSAGGS 106 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 A + ++ +++ K + PV+ + +M AS Y +S A++ + TS+VGSIGV+ Sbjct: 107 VTASDRVYHLVREFKRKSGIPVMAMIGDMGASGAYYVSVAADEVWTHPTSVVGSIGVVIF 166 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + K+GV +++ S K SP + K + Q ++ Y F +VS +R Sbjct: 167 NVGITGLMKKIGVEDRTLSSGAEKEMGSPLKPMTDKDRSLFQGLISDLYTQFFDIVSRNR 226 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 I D L+DGRI+T +A K L+D +G ++++ + L L + I+ P Sbjct: 227 QIAPDILKPLADGRIFTARQALKNHLVDRIGYRDDLIRHLKRLMHVKEFEVIRYREPFLA 286 Query: 258 YWFCDLKNLSISSLLEDT--IPLMKQTKVQGLWAVWNP 293 S L + M + +W+P Sbjct: 287 ATGIFGSESPADSPLASAGRLAGMMTKSGPTMLYLWDP 324 >gi|157374833|ref|YP_001473433.1| putative periplasmic protease [Shewanella sediminis HAW-EB3] gi|157317207|gb|ABV36305.1| peptidase S49, N-terminal domain protein [Shewanella sediminis HAW-EB3] Length = 343 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 113/241 (46%), Gaps = 14/241 (5%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P V + +G I+ S+ E I I I+ S +IV++ S GG + Sbjct: 95 EPRVFVVDFKGSIDASEVASLREEISAIIAIAE--SGDEVIVNVESGGGMVHGYGLASSQ 152 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ K P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P + K Sbjct: 153 LDRLRQAKLPLTICVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQVPNFNRLMKKH 212 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + K + F E + Q+ ++ ++ F +++ R P ++ Sbjct: 213 DIDYEQHTAGDFKRTLTLFGENTDEGRAKFQEELEETHKLFKSFIAQYR--PELDLGKVA 270 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G W G +A +GLID + ++V L +++++ K++ + KN+ S+ Sbjct: 271 TGEHWYGQQAIDLGLIDEIATSDDVV---MKLALERTVIKVR-YQLKKNFADKIAHGASL 326 Query: 269 S 269 S Sbjct: 327 S 327 >gi|91773876|ref|YP_566568.1| signal peptide peptidase A [Methanococcoides burtonii DSM 6242] gi|91712891|gb|ABE52818.1| signal peptide peptidase, peptidase family S49 [Methanococcoides burtonii DSM 6242] Length = 410 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 137/285 (48%), Gaps = 14/285 (4%) Query: 6 KKIKTRYVMLSLV--TLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------EDSQE 52 + I V++ ++ + V+Y S+ + VA I ++G + S++ Sbjct: 112 QYIAVISVLMLIIGGSFAVIYMSFGGDIYTTDDKVAVIYVQGFMLTGNLPSGFGYATSED 171 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 + + + + DDS A+++ ++S GGS A E I I++V++ PV+ + ++AASA Sbjct: 172 VCNSLRKATDDDSVKAIVLRVNSGGGSPVAAEEIVTEIKRVQDMGVPVVISMGDVAASAA 231 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y IS +++IVA ++ GSIGV+ Y F D+ G+ K K + + Sbjct: 232 YYISAPADLIVANPSTTTGSIGVISVYTNRSEFYDEEGIEFYVSKLGSFKDVGGDWRGLT 291 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 + + + +VV Y F+ V+E+RN+ + ++DGRI+ G EA+K+GL+D +G Sbjct: 292 SEEKEYVDNVVLDVYDLFITSVAENRNMTKSEVKDIADGRIYIGKEAQKIGLVDELGNFY 351 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + + LG + + N P ++SS + + Sbjct: 352 DAIDAAAELGGIEGEHLVYYINKPSLSSILFGSEETMSSQAAEQL 396 >gi|170768111|ref|ZP_02902564.1| peptidase, S49 family [Escherichia albertii TW07627] gi|170122877|gb|EDS91808.1| peptidase, S49 family [Escherichia albertii TW07627] Length = 349 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 + + P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVLTEGKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGVVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKKIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKNKDIDIELHTAGQYKRTLTFLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + ++V +L Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDDVILNLME 306 >gi|119356392|ref|YP_911036.1| signal peptide peptidase A [Chlorobium phaeobacteroides DSM 266] gi|119353741|gb|ABL64612.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium phaeobacteroides DSM 266] Length = 601 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 15/272 (5%) Query: 32 EDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPG 77 D +A I + G I D + L +E + AL++ + SPG Sbjct: 296 ADGRDAIALITLSGPIYRSGGASGMGVAEGFDEKLLQRSLEVALDNRDVKALVLRIDSPG 355 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + + +KP++ + +AAS GY+ + A N I A ++ GSIGV Sbjct: 356 GDALASADMLEMLYFAAKKKPIVVSMSGVAASGGYMAALAGNKIFAEPLTITGSIGVYAL 415 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P + ++K G+ + V S F ++ A YH FV V+ SR Sbjct: 416 KPEISGLVEKTGLQREVVTRGRYADATSLFKPLDKDAYDKFVAASGDVYHDFVSKVATSR 475 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPK 256 + + ++ GR+W+G A + GLID +GG + + LG +D++ + + P + Sbjct: 476 KMRWAAADSVAGGRVWSGKRALQAGLIDSLGGLHDAIREAQILGKIDKTKKPRILFYPER 535 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 W L S +KQ + L Sbjct: 536 KSWMESLAEGDFSGFSRSVTIALKQRLIHELV 567 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 107/256 (41%), Gaps = 31/256 (12%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------Q 51 +V++ ++ +F + S V + I+G +++ Q Sbjct: 16 FSFVVVPILIAVSAFFYFRSSYVLPDKFVLSVPIQGNLDEVHSLSSSLPLLSSAEPLSFQ 75 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYA----GEAIFRAIQKVKNR-KPVITEVHEM 106 +L+ + + D ++++ + G +A + +I+K+K K V+ + Sbjct: 76 DLLFLFDHAAGDKRIGSILLEI----GGVHANPAKLTELRYSIEKMKASGKKVVAFLRSA 131 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S YL++ A + IV E + G+ + + L+K+G++ ++ + K+ P Sbjct: 132 EDS-DYLLATACDSIVVEEGGFLMLDGLKAETLFYTKSLNKIGITFQASQWKTYKSGIEP 190 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGL 223 F + + + ++ + +++D Y ++ S+ R I D + D + + +A ++GL Sbjct: 191 FVRTGASSEYLEQIGELLDDVYDDYLGYASKRRGISRDSLQAVIDNMALLSAKKAVQLGL 250 Query: 224 IDVVGGQEEVWQSLYA 239 D + + +SL Sbjct: 251 ADGIASSWALNRSLAG 266 >gi|237752037|ref|ZP_04582517.1| protease IV [Helicobacter winghamensis ATCC BAA-430] gi|229376604|gb|EEO26695.1| protease IV [Helicobacter winghamensis ATCC BAA-430] Length = 293 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 133/276 (48%), Gaps = 4/276 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 +EFV K +K ++ L+ + +++ S V +++ +VARI + G I S ++ +E + Sbjct: 11 LEFVGKHLKA---LIFLLVVVLIFMSKQEKVLEDA-NVARIDLYGAILQSDTFLQELESL 66 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 ++ +++ + SPGG+ I AI++V + PV+ AS YL ++ Sbjct: 67 EKNPHLKGILLVIDSPGGAIAPSVEISEAIKRVNFKIPVVAYAQGAMASGSYLAGVWADS 126 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +++GSIGV+ + K+G++ +++K+ K +P N + +M++D Sbjct: 127 IVANRGAMLGSIGVIINGMDLSELAKKVGIAPQTIKAGIYKEAGTPMRSWNKEEERMLKD 186 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V Y FV V +R + + + GRI + A ++GL+D VG + L+ Sbjct: 187 LVQEQYWMFVEEVVNARKLDIAQEPNFAQGRILSAKNAFELGLVDKVGSIYDAQMLLFKK 246 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + +K + + IS+ +++ I Sbjct: 247 ANILEPKWLKKEKDKIEVYLEKIFGEQISNGIQNGI 282 >gi|94496302|ref|ZP_01302879.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. SKA58] gi|94424048|gb|EAT09072.1| signal peptide peptidase SppA, 67K type [Sphingomonas sp. SKA58] Length = 617 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 14/276 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGS 79 + N+ + + + G I D + + + + + AL+V + SPGGS Sbjct: 294 ARAPANNGQIGVLTVAGDIVDGEAGPGTAAGDTISDLLLSALDKGNLKALVVRVDSPGGS 353 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A E I AI + K PV+ + +AAS GY +S ++I A ++ GSIGV Sbjct: 354 VMASEKIRSAIMQAKEDGLPVVVSMANVAASGGYWVSTPGDVIFAEPDTITGSIGVFGIL 413 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K+G++ V+++P+ +P P+ Q+MQ V+ Y FV LV++SR Sbjct: 414 PSFEGTLAKMGITTDGVRTTPLSGQPDLAGGTTPEFDQIMQLGVEDIYRRFVGLVAQSRK 473 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKN 257 ++ ++ GR+W G A+++GL+D GG E+ +D + + + Sbjct: 474 KKPEQIDRIAQGRVWDGGTARQLGLVDRFGGLEDAIAEAARRAKIDPAKARAFRIEKQPD 533 Query: 258 YWFCDLKNLSISSLLEDTIP---LMKQTKVQGLWAV 290 W L+ + + T P L +Q +Q WA+ Sbjct: 534 KWAEWLQEFAERESDDATAPRDMLARQAWLQRGWAL 569 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 83/206 (40%), Gaps = 15/206 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAAS 109 +++ +E D A++++L GG A I A+ V+ +KPV+ + + Sbjct: 74 DIVTALEAAKGDAKVKAVVLNLDGFLGGGQVALGRIGAALDAVRAAKKPVLAYA-TLYSD 132 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ + V +G Y K +DKLGV+ + K+ PF Sbjct: 133 DSYQLAAHASEVWTDPLGGVAIMGRGGSNLYYKGLIDKLGVNTHVYRVGTYKSFVEPFIR 192 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESR--------NIPYDKTLVLSDGRIWTGAEAK 219 +E +P+A Q Q + ++ + + V+++R ++G I A Sbjct: 193 TEQSPEARQANQALAEALWQQWQDDVAKARPRARIAAYAGDPAAAARAANGDI--AKAAL 250 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQS 245 GL+D +G + + D + Sbjct: 251 SAGLVDKLGDATTFADHVADIAGDSA 276 >gi|284921153|emb|CBG34219.1| probable protease [Escherichia coli 042] Length = 349 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I I + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAILAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|119944686|ref|YP_942366.1| peptidase S49 [Psychromonas ingrahamii 37] gi|119863290|gb|ABM02767.1| peptidase S49 [Psychromonas ingrahamii 37] Length = 321 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 17/277 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + K T + + + + PH A + I+G I ++ ++ + Sbjct: 31 IFFKSLTFLYLFGAIFFFFNTQTNLLSDQQKEPHTAMVQIKGVIAADKEANANTIVTGLR 90 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK---NRKPVITEVHEMAASAGYLIS 115 +++ + A+++ ++SPGGS +F IQ+++ K + + E+ AS GY I+ Sbjct: 91 AAFKNEFSQAVMLVINSPGGSPVQAGYVFDEIQRLRLLYPDKKLYAVIAELGASGGYYIA 150 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ I A + SLVGSIGV ++K+GV + S K PFS Sbjct: 151 AAADQIYADKASLVGSIGVTASSFGFVDLMNKVGVERRHYTSGKHKTFLDPFSPSKEAER 210 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTL---VLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q+V+D ++ F+ +V R + L G IW G +A +GLID +G Sbjct: 211 DFWQEVLDVTHRQFINVVKTGRGDRINSDKNSTDLFSGLIWNGEQALALGLIDGLGSPGF 270 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 V + + I +++ + K L IS Sbjct: 271 VAREIVR------AENIVNYSVQPSTIEKLTKRLGIS 301 >gi|115375108|ref|ZP_01462376.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|115367854|gb|EAU66821.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] Length = 587 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 35/311 (11%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIE---------------DSQELIERIERISR 62 + Y + + VA + G I ++ + + + S Sbjct: 263 LLFLDKYLDRTGGAREEGETVALVYGVGGIVRGKSESNPFGGEATFGAESVALALRKASE 322 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A++ + SPGGS A + + R +Q+ + + KPVI + AAS GY +S ++ I Sbjct: 323 DKEVKAILFRVDSPGGSYVASDTVRREVQRAREKGKPVIVSMATYAASGGYFVSMGADKI 382 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA +L GSIGV F KLG++ +++ S S+ P+ Sbjct: 383 VAQPGTLTGSIGVYGGKMVTADFWAKLGINFETISLGKDATLYSTDSDFTPEQQAKNDAS 442 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D Y F + +E R++P +K ++ GR+WTG +AK++GL+D +GG + + + Sbjct: 443 LDRVYTDFTQKAAEGRHLPLEKLQAVARGRVWTGEDAKELGLVDELGGFPKALELVREAA 502 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSIS---------------SLLEDTIPLMKQT---- 282 K+ P+ ++ + + L IP ++QT Sbjct: 503 KLPKDAKVHLQVFPRKKQPAEVIADILGGGEGDNSEDEGGAQVAALSPLIPALEQTRQMY 562 Query: 283 KVQGLWAVWNP 293 ++ +W P Sbjct: 563 RLGARLGLWGP 573 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 8/198 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA-- 107 ++++E +E+ ++D +L+V + PGG A A + + A++ + K + Sbjct: 61 RDVVEALEKAAQDKRVKSLLVHIDQPGGVAVA-QELRDAVKAFRASGKKAVAFTDTFGEG 119 Query: 108 --ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A+ Y ++ A + I + V G+ + P+ + KLGV + + K + Sbjct: 120 GSATGAYYLATAFDEIYIQPSGDVTLTGIAMETPFARDAFAKLGVQPRIGQRYEYKNAVN 179 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 ++E + + + S + VR ++E R + D+ L D G A + L Sbjct: 180 TYTEQGYTAAHREATEKFLGSLFGQLVRGIAEGRKLSEDEVKGLIDRAPLLGQAALEAKL 239 Query: 224 IDVVGGQEEVWQSLYALG 241 +D + ++EV + Sbjct: 240 VDGLLYRDEVLAKVKEEA 257 >gi|89056413|ref|YP_511864.1| peptidase S49 [Jannaschia sp. CCS1] gi|88865962|gb|ABD56839.1| peptidase S49 [Jannaschia sp. CCS1] Length = 278 Score = 221 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 9/233 (3%) Query: 33 DNSPHVARIAIRGQIEDSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P V+ I ++G I IE+ A+ + ++SPGGS Sbjct: 21 SSDPRVSVIRLQGAIASGTRGGINDATFAPVIEKAFAKGKPKAVALVMNSPGGSPVQSAL 80 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+++ K PV V ++AAS GY ++CA++ I +S+VGSIGV+ Sbjct: 81 VAARIRRLAEEKDIPVHAFVEDVAASGGYWLACAADDIWVDPSSIVGSIGVVSAGFGFVE 140 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L KLGV + + K+ PFS + V+ ++ + + F+ V R Sbjct: 141 ALGKLGVERRVHTAGENKSILDPFSPEKDEDVERLKSLQTDIHASFIDHVKTRRGDRLKD 200 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + G WTG ++GL D + + +Y V ++ K P+ Sbjct: 201 HPEMFTGAFWTGTRGVELGLADGIAHLVPKMKEVYGDKVTFTVHGPKKPLIPR 253 >gi|160900710|ref|YP_001566292.1| peptidase S49 [Delftia acidovorans SPH-1] gi|160366294|gb|ABX37907.1| peptidase S49 [Delftia acidovorans SPH-1] Length = 348 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 7/276 (2%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSA 66 + L LV L V++ ++ +SPH A + ++G+I ++ ++ + D + Sbjct: 73 WTALILVVLWVLFAKDTATTTSSSPHTAVVEVKGEIAAGADASAEFVVAAMRSAFEDSGS 132 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAA 124 A+++ ++SPGGS I I ++K + KP+ V E ASA Y I+ A++ I Sbjct: 133 RAVVLLINSPGGSPVQAGIINDEIVRLKGKYDKPLYAVVEETCASAAYYIAAAADEIFVD 192 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + S+VGSIGVL ++KLGV + + + K PFS ++ + ++ Sbjct: 193 KASIVGSIGVLMDGFGFTGAMEKLGVERRLLTAGENKGFLDPFSPMSEGQREHAHKMLGQ 252 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 + F+ +V R +T G WTG +A ++GL D +G + V + + Sbjct: 253 IHSQFINVVKAGRGDRLHETPETFSGLFWTGQQAVEMGLADKLGSLDYVAREVVKAEEVV 312 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + + F L ++P ++ Sbjct: 313 DYTRRDNVAERLAKRFGAAFGGGAVQALRSSLPALR 348 >gi|34762510|ref|ZP_00143508.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887843|gb|EAA24913.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 502 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 129/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 224 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 283 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 284 GGSALESEKIYQKLKKL--EIPIYISMGDLCASGGYYIATIGKKLFANPVTLTGSIGVVI 341 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V E+ Sbjct: 342 LYPEFTETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVMEA 401 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK GL+D +G + SL ++ K+ K Sbjct: 402 RNISEEDLEKIAGGRVWLGSQAKANGLVDELGSLNDCIDSLAK-DLELKDFKLTYIRGRK 460 Query: 257 NYWFCD--LKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I +++ + L+ Sbjct: 461 SIMEVVSAMKPQFIKSNIIEKIEMIRSYSNKILYY 495 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 87/208 (41%), Gaps = 22/208 (10%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA----YAGEAIFRAIQKV 93 ++ I+I + + L++ +E + D +I+ + E I +K+ Sbjct: 10 ISTISINKTL-SHETLLKALENLVNDKKIEKIIIDVD----EVDLSRVHIEEIKEIFEKL 64 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI----GVLFQYPYVKPFLDKLG 149 K +I + + Y ++ +N I T S G ++ PY K L LG Sbjct: 65 SVNKEIIA-IGTIFDEYSYQVALLANKIYMLNTKQ--SCLYFRGYEYKEPYFKNILATLG 121 Query: 150 VSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V++ ++ K FS +++ + + + ++ ++ + F+ L+ E R + T + Sbjct: 122 VTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFINLIKEKRKVDI--TNEI 179 Query: 208 SDGRIWTG--AEAKKVGLIDVVGGQEEV 233 G + +A ++GLID + EE+ Sbjct: 180 LSGDLIFANSEKAIQLGLIDGLSTYEEI 207 >gi|212697414|ref|ZP_03305542.1| hypothetical protein ANHYDRO_01984 [Anaerococcus hydrogenalis DSM 7454] gi|212675606|gb|EEB35213.1| hypothetical protein ANHYDRO_01984 [Anaerococcus hydrogenalis DSM 7454] Length = 333 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 D+ +A ++ G I D Q + +++++ + DDS LI+ ++SPGG+ Y E I Sbjct: 63 GDSKNKIAVLSYEGAIGDGQVYDDFMDQLDDVYDDDSVKGLIMQVNSPGGAVYNSEQIAN 122 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+K++ K PV T + MAAS GY IS ++ I A+ +L GSIGV+ + + Sbjct: 123 KIKKIQKDKKIPVFTVMKTMAASGGYYISAPTDRIYASNETLTGSIGVIMSSTSFQGLFE 182 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K G+ +++ + MK S ++ + + QD+++SS+ FV++VS+ R++ D+ Sbjct: 183 KYGIKQQNITTGKMKDAGSVGKDMTDEQKKYFQDLINSSFDRFVKIVSQGRSMKEDEVRK 242 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+DGR++ GA+AK GL+D +G + + + Sbjct: 243 LADGRVYDGAQAKNNGLVDKIGDLDLAIEDMKK 275 >gi|126726020|ref|ZP_01741862.1| peptidase S49 [Rhodobacterales bacterium HTCC2150] gi|126705224|gb|EBA04315.1| peptidase S49 [Rhodobacterales bacterium HTCC2150] Length = 264 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 13/248 (5%) Query: 33 DNSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++P VA I + G I + Q L IER A+ + ++SPGGS I Sbjct: 9 KSTPLVAVIRLSGVISTGRGGLNDQTLAPMIERAFAKGKPKAVALVINSPGGSPVQSSLI 68 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ K PV V ++AAS GY ++CA++ I TS++GSIGV+ Sbjct: 69 SARIRRLSEEKEIPVYAFVEDVAASGGYWLACAADQIFVDATSIIGSIGVISASFGFDKV 128 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV + + K+ PFS V+ ++ + + + F+ V R D+ Sbjct: 129 MANYGVERRIHTAGKSKSFMDPFSPQKAADVKRIKSLQEPIHQAFINHVQTRRGTRLDEN 188 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G IW G +A VG+ D + + L+ + + + P K+ Sbjct: 189 AEMFGGEIWVGQQALDVGIADGIAHVSPKMKELFG-----DKTRFRTYGPKKSALSRFGL 243 Query: 265 NLSISSLL 272 +L +LL Sbjct: 244 SLVDETLL 251 >gi|289764414|ref|ZP_06523792.1| protease IV [Fusobacterium sp. D11] gi|289715969|gb|EFD79981.1| protease IV [Fusobacterium sp. D11] Length = 306 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 130/275 (47%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 28 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 87 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 88 GGSALESEKIYQKLKKL--EIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 145 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 146 LYPEFTETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 205 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK+ GL+D +G + SL ++ K+ K Sbjct: 206 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGSLNDCIDSLVK-DLELKDFKLTYIRGRK 264 Query: 257 NYW--FCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 265 SMMEIISAMKPQFIKSDIIEKIEMIKSYSNKILYY 299 >gi|45358632|ref|NP_988189.1| basic helix-loop-helix dimerization domain-containing protein [Methanococcus maripaludis S2] gi|45047498|emb|CAF30625.1| Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type [Methanococcus maripaludis S2] Length = 308 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 142/268 (52%), Gaps = 16/268 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE--------------DSQELIERI 57 +++++++ + ++ F S + +S ++A I I G I + +E + Sbjct: 12 FLIIAILMVGLLVFVSSDGI--SSKNIALINIDGTITLESSDSGLFSSIQPGVNDYVEWL 69 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + +D+ A+I+ ++SPGG A A E + R I++V +KPV+ + M ASA Y + + Sbjct: 70 DDAENNDNIKAVIIKINSPGGGAVASEKLSRKIKEVSEKKPVVAYIENMGASAAYQAASS 129 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 +N IVA ++VGSIGV + + ++KLG++ S+ K +P + + M Sbjct: 130 TNYIVAERQAVVGSIGVRMELIHYYGLMEKLGINTTSITGGKYKDIGTPTRSMTEEEYAM 189 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ +V+ SY+ FV V+E+RN+ ++TL ++DG+I++G +A++VGL+D+ G +++ Sbjct: 190 LESMVNESYYEFVSWVAENRNMTINETLEVADGKIYSGTQAQRVGLVDITGTEDDAVDMA 249 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKN 265 LG + + F N Sbjct: 250 VKLGNITNPDIYEYGKTSSANLFGMTFN 277 >gi|325846372|ref|ZP_08169341.1| signal peptide peptidase SppA, 36K type [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481556|gb|EGC84596.1| signal peptide peptidase SppA, 36K type [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 333 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 D+ +A ++ G I D Q + +++++ + DDS +I+ ++SPGG+ Y E I Sbjct: 63 GDSKNKIAVLSYEGAIGDGQVYDDFMDQLDDVYDDDSVKGVIMQVNSPGGAVYNSEQIAN 122 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+K++ K PV T + MAAS GY IS ++ I A+ +L GSIGV+ + + Sbjct: 123 KIKKIQKDKKIPVFTVMKTMAASGGYYISAPTDRIYASNETLTGSIGVIMSSTSFQGLFE 182 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K G+ +++ + MK S ++ + + QD+++SS+ FV++VS+ R++ D+ Sbjct: 183 KYGIKQQNITTGKMKDAGSAGKDMTDEQKKYFQDLINSSFDRFVKIVSQGRSMKEDEVRK 242 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+DGR++ GA+AK GL+D +G + + + Sbjct: 243 LADGRVYDGAQAKSNGLVDKIGDLDLAIEDMKK 275 >gi|189499532|ref|YP_001959002.1| signal peptide peptidase SppA, 67K type [Chlorobium phaeobacteroides BS1] gi|189494973|gb|ACE03521.1| signal peptide peptidase SppA, 67K type [Chlorobium phaeobacteroides BS1] Length = 596 Score = 221 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 18/264 (6%) Query: 33 DNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPGG 78 + H+A I G I D + L ++ D+S A+++ + SPGG Sbjct: 296 ETKEHIAVITASGPIVRSSDDMAAGTEQGFDEETLRSSVQAALDDESVKAIVLRIDSPGG 355 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A A + + + + +KP++T + +AAS GY+I+ A++ I A ++ GSIGV Sbjct: 356 DALASANMLQVLDSARVKKPIVTSMSSVAASGGYMIALAADSIFAEPLTVTGSIGVYALK 415 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + +K+ ++ + + F ++ + + Y F+ V SR Sbjct: 416 PEISKLQEKIALNREVFTRGKNADAYTVFKPLDEAGMAKFMETTGWIYDDFLDKVVRSRK 475 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV--DQSIRKIKDWNPPK 256 + ++ ++ GR+W G A K GL+D +GG E ++ L ++ +K + P+ Sbjct: 476 MTREEVDAVAGGRVWMGEAAVKNGLVDRIGGLPEALRAAQVLAGIDSAAVPGLKFYPEPQ 535 Query: 257 NYWFCDLKNLSI--SSLLEDTIPL 278 S L IP Sbjct: 536 GLMDYLFGGGPGIESHLFSSKIPA 559 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 108/243 (44%), Gaps = 27/243 (11%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------QELIERIERISR 62 VY +++ V +I I G I ++ Q++I ++R S Sbjct: 25 IGVYRLFTAQKSLPEEFVLKIDISGDIRETVDTGFALPFERESQELSLQDIIFLLDRASE 84 Query: 63 DDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 D +++ + G + I RAI++ +N ++ A ++ A + Sbjct: 85 DTRIKGILLDID---GVRTGSAKIQQIQRAIERTRNSGKLVNAFLRNAGDQDVWLASACD 141 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV--NPKAVQM 177 ++A + + G+ + + L+KLGVS ++V+ + K+ PF+ + +P+ + Sbjct: 142 AMIAERGNFLLLDGLRAELLFYTGTLEKLGVSFQAVQWTDWKSGVEPFTRLAASPEFRER 201 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ +DS Y + V++ R+IP + ++ + + + + +AK++ ++D V G E + Sbjct: 202 IEMSLDSVYAAYTGYVTKQRDIPLETYEIIINEKTVLSADQAKELKVVDEVNGHWEYLER 261 Query: 237 LYA 239 L Sbjct: 262 LKK 264 >gi|292488385|ref|YP_003531267.1| putative protease [Erwinia amylovora CFBP1430] gi|292899581|ref|YP_003538950.1| peptidase [Erwinia amylovora ATCC 49946] gi|291199429|emb|CBJ46546.1| putative peptidase [Erwinia amylovora ATCC 49946] gi|291553814|emb|CBA20859.1| putative protease [Erwinia amylovora CFBP1430] gi|312172528|emb|CBX80784.1| putative protease [Erwinia amylovora ATCC BAA-2158] Length = 349 Score = 221 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 102/209 (48%), Gaps = 8/209 (3%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAI 86 V P + I +G D+ E+ E +S + +++ L SPGG + Sbjct: 96 VNGGKPTLYVIDFKGS-MDAGEVSSLREEVSAVMAVAEKGDEVLLRLESPGGVVHGYGLA 154 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q+++++ P+ V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P L Sbjct: 155 ASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPNFNRLL 214 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 215 KRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREELNETHQLFKQFVHQMR--PTLDID 272 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A + GL+D +G +++ Sbjct: 273 SIATGEHWYGQQALEKGLVDAIGTSDDLI 301 >gi|310825614|ref|YP_003957972.1| Signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] gi|309398686|gb|ADO76145.1| Signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca DW4/3-1] Length = 598 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 35/311 (11%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIE---------------DSQELIERIERISR 62 + Y + + VA + G I ++ + + + S Sbjct: 274 LLFLDKYLDRTGGAREEGETVALVYGVGGIVRGKSESNPFGGEATFGAESVALALRKASE 333 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D A++ + SPGGS A + + R +Q+ + + KPVI + AAS GY +S ++ I Sbjct: 334 DKEVKAILFRVDSPGGSYVASDTVRREVQRAREKGKPVIVSMATYAASGGYFVSMGADKI 393 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 VA +L GSIGV F KLG++ +++ S S+ P+ Sbjct: 394 VAQPGTLTGSIGVYGGKMVTADFWAKLGINFETISLGKDATLYSTDSDFTPEQQAKNDAS 453 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D Y F + +E R++P +K ++ GR+WTG +AK++GL+D +GG + + + Sbjct: 454 LDRVYTDFTQKAAEGRHLPLEKLQAVARGRVWTGEDAKELGLVDELGGFPKALELVREAA 513 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSIS---------------SLLEDTIPLMKQT---- 282 K+ P+ ++ + + L IP ++QT Sbjct: 514 KLPKDAKVHLQVFPRKKQPAEVIADILGGGEGDNSEDEGGAQVAALSPLIPALEQTRQMY 573 Query: 283 KVQGLWAVWNP 293 ++ +W P Sbjct: 574 RLGARLGLWGP 584 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 8/198 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA-- 107 ++++E +E+ ++D +L+V + PGG A A + + A++ + K + Sbjct: 72 RDVVEALEKAAQDKRVKSLLVHIDQPGGVAVA-QELRDAVKAFRASGKKAVAFTDTFGEG 130 Query: 108 --ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A+ Y ++ A + I + V G+ + P+ + KLGV + + K + Sbjct: 131 GSATGAYYLATAFDEIYIQPSGDVTLTGIAMETPFARDAFAKLGVQPRIGQRYEYKNAVN 190 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 ++E + + + S + VR ++E R + D+ L D G A + L Sbjct: 191 TYTEQGYTAAHREATEKFLGSLFGQLVRGIAEGRKLSEDEVKGLIDRAPLLGQAALEAKL 250 Query: 224 IDVVGGQEEVWQSLYALG 241 +D + ++EV + Sbjct: 251 VDGLLYRDEVLAKVKEEA 268 >gi|262039165|ref|ZP_06012485.1| signal peptide peptidase SppA, 67K type [Leptotrichia goodfellowii F0264] gi|261746781|gb|EEY34300.1| signal peptide peptidase SppA, 67K type [Leptotrichia goodfellowii F0264] Length = 595 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 29/286 (10%) Query: 32 EDNSPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGSAY 81 + +A I G I ++E + E+++ +S+ +++ ++SPGGSA Sbjct: 306 NQDKGTIAVIFAEGPIVYNEEAQGIYISPDNMAEKLKELSKIKDLKGVVLRVNSPGGSAL 365 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A E I++ + K+ PV + E+AAS GY IS + + A + ++ GSIGV+ +P Sbjct: 366 ASEMIYQMLSKI--NVPVYVSMSEVAASGGYYISMSGKKVFANDATITGSIGVVSMFPKF 423 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 +K GV+ S+ PF ++ ++ + + ++++Y F VS++RN+ Sbjct: 424 YNAQNKYGVTSNSISKGKYTDTFDPFVPLSAESRNKIIESMNATYDEFKSRVSKNRNMAP 483 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA---LGVDQSIRKI---KDWNPP 255 + G+IW G+EAKK+ L+D + +E ++L LG + + I KD+ Sbjct: 484 QVLENYAQGKIWLGSEAKKINLVDGIATLDETVKTLARDLNLGDNYRVENIYAKKDFKET 543 Query: 256 ----KNYWFCDLK-------NLSISSLLEDTIPLMKQTKVQGLWAV 290 +Y F + L SS + D L++Q K + ++ + Sbjct: 544 LKLLSSYIFEKFQLTSQLETKLPGSSKIMDEYKLIEQNKNKPMYYL 589 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 88/206 (42%), Gaps = 31/206 (15%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASA 110 +++ +E I +D+ +I++L S+ E I + +Q++KN+ K V Sbjct: 89 DVLNSLEDIKNNDNIKGVIINLDQTNISSVKSEEISKKLQEIKNKNKKVYAF-------G 141 Query: 111 GYL------ISCASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMK 161 Y+ ++ +N I+ ++ GS+ + + Y K L +GV ++ V+ K Sbjct: 142 AYMDNNNYPLASVANEIIMVPSA-SGSVSLAGYHYSDLYYKKLLSNVGVDMEVVRIGDFK 200 Query: 162 AEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG---- 215 + ++ ++ + +++S ++ F+ VS++R + +K + I G Sbjct: 201 SYGENYTSDTMSSGLRNELTRILESRFNSFLDKVSKARRLDKNKL----NADILNGDNTN 256 Query: 216 ---AEAKKVGLIDVVGGQEEVWQSLY 238 + A+ +D + ++ L Sbjct: 257 LTPSAARDKNFVDTLEYFNDLMTKLQ 282 >gi|237740732|ref|ZP_04571213.1| protease IV [Fusobacterium sp. 2_1_31] gi|229422749|gb|EEO37796.1| protease IV [Fusobacterium sp. 2_1_31] Length = 294 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 11/223 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E++E + + L++ ++SP Sbjct: 16 AYKRKKNKSKNTIAVINLEGEIDTRESREAVINYDNVVEKLETLEDIKNLKGLVLRINSP 75 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + + AS GY I+ + A +L GSIGV+ Sbjct: 76 GGSALESEKIYQKLKKL--EIPIYISMGDFCASGGYYIATVGKKLFATPVTLTGSIGVVI 133 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V E+ Sbjct: 134 LYPEFSETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIVYSMNEVYSEFKAHVMEA 193 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 RNI + ++ GR+W G++AK+ GL+D +G + SL Sbjct: 194 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGTLNDCIDSLAK 236 >gi|254302877|ref|ZP_04970235.1| possible S49 family peptidase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323069|gb|EDK88319.1| possible S49 family peptidase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 589 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + ++D++ + I + G I +SQ E +E++ D A+++ Sbjct: 303 YYKEGSMDDSNNIIYVIPLEGDIVESQTEVFAGEENINVSETLEKLNIAKESDKVKAVVL 362 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I ++++ KPV + +AAS GY IS +N I ++ GS Sbjct: 363 RVNSPGGSALTSDIIAEKVKELAEEKPVYVSMSSVAASGGYYISANANKIFVDRNTITGS 422 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S S K + + Y F+ Sbjct: 423 IGVVSILPDFSKLITDNGVNIEKISEGEYSDLYSSDS-FTEKKYNKIYNSNLKVYEDFLN 481 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS+ R I +K +++GRIWTG EA K+GL D +GG +L Sbjct: 482 VVSKGRKIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNATIYALAE 529 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 20/213 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ IE IS DD +I+ L+ G S E + + + + K +I + Sbjct: 95 TLLQSIETISYDDRVEGIILKLN---GDSLSYAQSEELAQELSMARAANKKIIAYFENVG 151 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEP 164 Y ++ +N I + S+ + + Y+K DK GV + K+ Sbjct: 152 RK-NYYLASYANEIYMPSANST-SVNIYPYFREEFYIKKLADKFGVKFNIIHVGDYKSYM 209 Query: 165 S--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA--EAK 219 S ++ +A + V+D +Y+ F+ +VS +R I D + DG + + + Sbjct: 210 ENLANSTMSKEAKEDTVRVLDKNYNNFLDVVSLNRKISRDDLDKIIKDGELVAASSIDLM 269 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 LID + V +G I I+++ Sbjct: 270 NNNLIDKYAYWDNVISM---VGGKDKIITIQEY 299 >gi|209517241|ref|ZP_03266086.1| peptidase S49 [Burkholderia sp. H160] gi|209502377|gb|EEA02388.1| peptidase S49 [Burkholderia sp. H160] Length = 333 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 12/284 (4%) Query: 7 KIKTRYVMLSLVTLTV--VYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R+V L+++ L V V V H A +++ G+I +++++ ++ Sbjct: 49 RIFFRFVFLAVLALAVWGVLNFSGERVATTGRHTAMVSLNGEIATDTSANAEDINTALDS 108 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D +I+ +SPGGS I I++++ + P + V +M AS GY + Sbjct: 109 AFEDSDTAGVILYCNSPGGSPVQAGIINSEIRRLRGKYPSIPLYVVVGDMCASGGYYAAA 168 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A+ I + S+VGSIGVL +DKLG+ + + K PFS PK Sbjct: 169 AAEKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTAGENKGFFDPFSPETPKMDT 228 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + QD++D + F+ V + R +T + G WTG ++ ++GL D +G + V + Sbjct: 229 IAQDMLDQIHAQFIDAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGLGDADYVARE 288 Query: 237 LYALG--VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 ++ VD ++++ + + + L + + L Sbjct: 289 IFKAPDIVDYTVKESITDRVARKFGAAVGAGAVRAMALGEKLNL 332 >gi|91210563|ref|YP_540549.1| putative periplasmic protease [Escherichia coli UTI89] gi|110641504|ref|YP_669234.1| putative periplasmic protease [Escherichia coli 536] gi|117623532|ref|YP_852445.1| putative periplasmic protease [Escherichia coli APEC O1] gi|191170896|ref|ZP_03032447.1| peptidase, S49 (protease IV) family [Escherichia coli F11] gi|218558258|ref|YP_002391171.1| periplasmic protease [Escherichia coli S88] gi|237705296|ref|ZP_04535777.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300971798|ref|ZP_07171632.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|306813705|ref|ZP_07447886.1| putative periplasmic protease [Escherichia coli NC101] gi|91072137|gb|ABE07018.1| possible protease SohB [Escherichia coli UTI89] gi|110343096|gb|ABG69333.1| possible protease SohB [Escherichia coli 536] gi|115512656|gb|ABJ00731.1| possible protease SohB [Escherichia coli APEC O1] gi|190908628|gb|EDV68216.1| peptidase, S49 (protease IV) family [Escherichia coli F11] gi|218365027|emb|CAR02730.1| putative inner membrane peptidase [Escherichia coli S88] gi|222033076|emb|CAP75816.1| protease sohB [Escherichia coli LF82] gi|226900053|gb|EEH86312.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294493202|gb|ADE91958.1| peptidase, S49 (protease IV) family [Escherichia coli IHE3034] gi|300309304|gb|EFJ63824.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|305852979|gb|EFM53424.1| putative periplasmic protease [Escherichia coli NC101] gi|307627154|gb|ADN71458.1| putative periplasmic protease [Escherichia coli UM146] gi|312945906|gb|ADR26733.1| putative periplasmic protease [Escherichia coli O83:H1 str. NRG 857C] gi|315289110|gb|EFU48508.1| putative signal peptide peptidase SppA [Escherichia coli MS 110-3] gi|323949125|gb|EGB45017.1| peptidase S49 [Escherichia coli H252] gi|323953857|gb|EGB49658.1| peptidase S49 [Escherichia coli H263] gi|324006118|gb|EGB75337.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2] gi|324011315|gb|EGB80534.1| putative signal peptide peptidase SppA [Escherichia coli MS 60-1] Length = 349 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 V D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVVTDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|256845156|ref|ZP_05550614.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] gi|256718715|gb|EEU32270.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_36A2] Length = 551 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 128/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAVINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EVPIYISMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 391 LYPEFTETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G +AK+ GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGNKAKENGLVDELGSLNDCIDSLAK-DLELKDFKLTYIRGRK 509 Query: 257 NYWF--CDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + I ++K + L+ Sbjct: 510 SIMEIVSAMKPQFIKSDIIGKIEMLKSYSNKILYY 544 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 13/158 (8%) Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI----GVLFQYP 139 E I +K+ K +I + Y ++ +N I T S G ++ P Sbjct: 104 EEIKEIFEKLSVDKEIIA-IGTTFDEYSYQVALLANKIYMLNTKQ--SCLYFRGYEYKEP 160 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 Y K L LGV++ ++ K FS +++ + + + ++ ++ + F+ LV E R Sbjct: 161 YFKNILATLGVTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFINLVKEKR 220 Query: 198 NIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQEEV 233 + T + G + +A ++GLID + EE+ Sbjct: 221 KVDI--TNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|218699982|ref|YP_002407611.1| putative periplasmic protease [Escherichia coli IAI39] gi|218369968|emb|CAR17742.1| putative inner membrane peptidase [Escherichia coli IAI39] Length = 349 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKSQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|260427805|ref|ZP_05781784.1| peptidase, family S49 [Citreicella sp. SE45] gi|260422297|gb|EEX15548.1| peptidase, family S49 [Citreicella sp. SE45] Length = 326 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 19/257 (7%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P VA + ++G I Q L +E+ R A+ + ++SPGGS Sbjct: 70 KTKPTVAVVRMQGAIGTGGRMALSDQSLRPLLEKAFRKGKPAAVALEINSPGGSPVQSSL 129 Query: 86 IFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ + PV ++AAS GY I+ A++ I A +S++GSIGV+ Sbjct: 130 IGARIRRLSEETKVPVFAFTEDVAASGGYWIASAADEIWADPSSILGSIGVISAGFGAHV 189 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + G+ + + K+ PF + + V + ++ + F++ + R Sbjct: 190 FLQRQGIERRVHTAGKSKSMLDPFRPESEEDVARLDRLLGQLHETFIQQIRSRRGDKLAD 249 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G +W G A VGL D VG V + + V + + + + + Sbjct: 250 DPDLFTGEVWIGKAACDVGLADGVGHLVPVMKQRFGDKV-----RFRRYEQKRRLFPRL- 303 Query: 264 KNLSISSLLEDTIPLMK 280 ++L +D + ++ Sbjct: 304 ----GATLAQDALGAVE 316 >gi|218689262|ref|YP_002397474.1| putative periplasmic protease [Escherichia coli ED1a] gi|218426826|emb|CAR07676.2| putative inner membrane peptidase [Escherichia coli ED1a] Length = 349 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 V D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVVTDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|304396079|ref|ZP_07377961.1| Peptidase S49 domain protein [Pantoea sp. aB] gi|304356448|gb|EFM20813.1| Peptidase S49 domain protein [Pantoea sp. aB] Length = 348 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 8/211 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT----ALIVSLSSPGGSAYAGE 84 + P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 93 GQTDSVKPTLYVLDFKGS-MDAGEVTSLREEISAVLAVKQPGDEVLLRLESPGGVVHGYG 151 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q+++++ + V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 152 LAASQLQRLRDQGLRITAAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPNFNR 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L + + ++ + K + F E + + Q+ +D ++ F + V + R P Sbjct: 212 LLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQEDLDETHLLFKQFVHQMR--PSLD 269 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A +GLID +G +++ Sbjct: 270 INKVATGEHWYGRQALNLGLIDEIGTSDDLI 300 >gi|220934529|ref|YP_002513428.1| peptidase S49 [Thioalkalivibrio sp. HL-EbGR7] gi|219995839|gb|ACL72441.1| peptidase S49 [Thioalkalivibrio sp. HL-EbGR7] Length = 311 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 16/272 (5%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLS 74 + + + PH A + I+G I +S + + + + + RD + A+++ ++ Sbjct: 45 IIFMSGPMGPGAKKPGPHTALVDIQGVISESSQASADLVTQGLRQAFRDKNTVAVMLRVN 104 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 SPGGS I ++++K P V + ++ AS GY +++ I A +S+VGS Sbjct: 105 SPGGSPVQSAYINNELRRLKAEHPDTPVYAVISDVGASGGYYAVVSADYIYADASSVVGS 164 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV + +DKLG+ + + + K PF V+P+ +Q ++D+ + FV Sbjct: 165 IGVRMDGFGLVEAIDKLGIERRLMTAGENKGLLDPFLPVDPREQAHVQRLLDNIHAQFVD 224 Query: 192 LVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 V R L +G IWTG EA +G+ID +G V + + I Sbjct: 225 AVKTGRGDRLKGSDEELFNGLIWTGDEALALGIIDGLGSPGYVAREVIG------QENIV 278 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 D+ P ++ F L + +++ + L + T Sbjct: 279 DFTPRQDI-FRRLADSFGAAMGRAIVNLSEPT 309 >gi|256026400|ref|ZP_05440234.1| protease IV [Fusobacterium sp. D11] Length = 334 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 130/275 (47%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 56 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 115 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 116 GGSALESEKIYQKLKKL--EIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVV 173 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 174 LYPEFTETINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVIQA 233 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK+ GL+D +G + SL ++ K+ K Sbjct: 234 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGSLNDCIDSLVK-DLELKDFKLTYIRGRK 292 Query: 257 NYW--FCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 293 SMMEIISAMKPQFIKSDIIEKIEMIKSYSNKILYY 327 >gi|117919978|ref|YP_869170.1| putative periplasmic protease [Shewanella sp. ANA-3] gi|117612310|gb|ABK47764.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. ANA-3] Length = 338 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ED+ V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 88 EDSKGKVFVIDFKGSIDAAEVASLREEISAILTIAE--KGDEVVVNVESGGGMVHGYGLA 145 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 146 SSQLDRLRQAEIPLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLL 205 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + Q Q ++ ++ F VS+ R P Sbjct: 206 KKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLA 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++GLID + ++V L +R Sbjct: 264 KVATGEHWYGQQAIELGLIDAISTSDDVLMQLAGERTVYKLR 305 >gi|257054169|ref|YP_003132001.1| ClpP class periplasmic serine protease [Saccharomonospora viridis DSM 43017] gi|256584041|gb|ACU95174.1| ClpP class periplasmic serine protease [Saccharomonospora viridis DSM 43017] Length = 300 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 10/244 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +P + +A RG I + + ++R + A+ + ++SPGG+ + I+++ Sbjct: 54 TPQASPLAARGVI-NLASVESALKRAFGHERLKAVALQINSPGGAPTQSGLVAERIRQLA 112 Query: 95 NRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + K PVI ++AAS GY ++CA++ I A TSLVGSIGV+ L++ G+ Sbjct: 113 DDKGVPVIAFAEDVAASGGYWLACAADEIYAHRTSLVGSIGVVTNSFGFARLLERFGIER 172 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S K+ PFS P+ V+ + + + FV V + R ++ L +G + Sbjct: 173 RLYTSGEAKSRLDPFSPEKPEDVEWLNKLHTQLHDLFVEWVKQRRGSRLAESEELFNGDV 232 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 W G +A ++GL+D +G ++ + Y PK L S ++ + Sbjct: 233 WLGPKALELGLVDGLGNLRDIVKQRYPEAE-------IVVAEPKKPLLAKLGVGSPAAAV 285 Query: 273 EDTI 276 D + Sbjct: 286 LDAV 289 >gi|134096734|ref|YP_001102395.1| signal peptide peptidase [Saccharopolyspora erythraea NRRL 2338] gi|291008456|ref|ZP_06566429.1| signal peptide peptidase [Saccharopolyspora erythraea NRRL 2338] gi|133909357|emb|CAL99469.1| possible signal peptide peptidase [Saccharopolyspora erythraea NRRL 2338] Length = 298 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 118/278 (42%), Gaps = 20/278 (7%) Query: 29 SHVEDNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPG 77 + P VA + + G I +Q + R D +A+++S++SPG Sbjct: 26 GEKAERGPVVAVVKLHGVITPTPSPVSRSTISAQTTESALTRAFGHDRLSAVVLSINSPG 85 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G+ + I+++ + K PV+ ++AAS GY ++CA++ I A +TS+VGS+GV+ Sbjct: 86 GAPTQSALVADRIRELADEKKVPVLAFCEDVAASGGYWLACAADEIHAHQTSMVGSVGVV 145 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 LD+ GV + + K PFS V+ + + + F + V + Sbjct: 146 SATFGFNGLLDRFGVERRVYTAGDHKVRLDPFSPEKEDDVRWLHGLQAELHDQFQQWVRD 205 Query: 196 SRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R L G +++GA+A ++GL+D VG + + + + P Sbjct: 206 RRGERLKGTDEELFSGEVYSGAKALELGLVDGVGSLRGIVRRKF------PDAHLVTVEP 259 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 K S+ L +++ + + +W+ + Sbjct: 260 RKPLLAKLGVGSPASARLGGVGAVVEALEHRAMWSRFG 297 >gi|120402354|ref|YP_952183.1| signal peptide peptidase SppA, 67K type [Mycobacterium vanbaalenii PYR-1] gi|119955172|gb|ABM12177.1| signal peptide peptidase SppA, 67K type [Mycobacterium vanbaalenii PYR-1] Length = 594 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 32/288 (11%) Query: 36 PHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSPGGS 79 P +A + + G I + + + R + DD A+++ + SPGGS Sbjct: 301 PKIAVVTVAGPIVSGRGGRQMSPMGGSSSGADTIAAALRRAAADDDIAAIVLRVDSPGGS 360 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 E I+R + + + R KPV+ + +AAS GY +S A++ IVA ++ GSIGVL Sbjct: 361 VTGSETIWREVVRTRERGKPVVASMGAVAASGGYYVSMAADAIVANPGTITGSIGVLTGK 420 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + D+LGV +V+++ S + + ++ D Y FV+ V+E R+ Sbjct: 421 LVARELKDRLGVGSDTVRTNANADAWSINAPFTDEQQAHVEAEADLFYRDFVQRVAEGRH 480 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++ GR+WTGA+A + GL+D +GG + L +++ N P + Sbjct: 481 LSVEAVEQVARGRVWTGADALERGLVDELGGLRTAIRRAKVLAGIDEDTRVEVENLPSSS 540 Query: 259 WFCDLK----NLSISSLLEDTIPLM-----------KQTKVQGLWAVW 291 L+ +L ++ L++ + Q + G+ +W Sbjct: 541 LLDVLRPKPSSLPAAASLQEVFGALAIQSVLGIADRTQRSLTGVNVLW 588 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 82/222 (36%), Gaps = 17/222 (7%) Query: 38 VARIAIRGQIEDSQ-----ELIERIERISRDDSATALI--VSLSS--PGGSAYAGEAIFR 88 +A I G I + E + I R + D LI V + + PG + + Sbjct: 52 IAVI--SGVIGPGRPLLLREAVAAIHRAAEDPRVAGLIARVQIDAAPPG----PVQELRD 105 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 AI +KP + + Y ++ A + + VG +G +++ LDKL Sbjct: 106 AIVAFTGKKPSLAWAETYPGTLSYYLASAFGEVWMQPSGTVGLVGFATSALFLRDALDKL 165 Query: 149 GVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 GV + V K+ + F+ + +V+ V+ SR I Sbjct: 166 GVQAQFVTRGEYKSAANLFTQDSYTDAHREADTALVNGLRTQVWDAVAASRGIDRAALDA 225 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 L+D +A GL+D +G ++E + + + + + Sbjct: 226 LADRAPLLRDDAVTAGLVDRIGFRDEAYARIAEMSGAEGVSP 267 >gi|239831270|ref|ZP_04679599.1| Na(+)/H(+) antiporter nhaA [Ochrobactrum intermedium LMG 3301] gi|239823537|gb|EEQ95105.1| Na(+)/H(+) antiporter nhaA [Ochrobactrum intermedium LMG 3301] Length = 290 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 19/272 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +SL+SPGGS I+ Sbjct: 20 IPVVRLHGAIMSGGSAFRPSLSIASTAAILEKAFTDKEAPAVAISLNSPGGSPVQSRLIY 79 Query: 88 RAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + +K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 RRIRDLAAEHQKKVFIFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF ++ ++ + + F+ +V E R + Sbjct: 140 KKIGVERRVYTAGSNKVTLDPFQPEKKADIERLKSLQLEIHETFIDMVKERRGAKLAEDQ 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN-----PPKNYWF 260 L G WTG +A+++GLID +G + Y V + + K P + Sbjct: 200 DLFTGLFWTGIKAQQLGLIDGLGDMRSFLRKTYGDKVKLKLVEQKRSLLGRKVPGVDMAL 259 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +L+ SI++ L D L+ + + LWA + Sbjct: 260 ANLEPASIAAHLGD--GLLSVAEEKALWARYG 289 >gi|300935368|ref|ZP_07150367.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300459398|gb|EFK22891.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] Length = 349 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEMATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|32490856|ref|NP_871110.1| protease 4 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166062|dbj|BAC24253.1| sppA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 615 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 13/234 (5%) Query: 33 DNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 N +A I G I + + + +I++ D + +L+V ++SPGGS A Sbjct: 321 SNKGEIAVIFANGVIINGPDKPGFSSGDFIAYQIKQARLDPNIKSLVVRINSPGGSVNAS 380 Query: 84 EAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I + KN KPV+ + +AAS GY IS +N I++ +L GSIG+ ++ Sbjct: 381 EIIRSELDATKNMGKPVVVSMGGIAASGGYWISTPANYIISNPDTLTGSIGIFGIINTIE 440 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+ +G+ V +SP+ + ++ + ++ M+ ++++ Y+ F+ LVS+SRN Sbjct: 441 STLESIGIYSDGVSTSPLANI-NIAKKLPSEFLEKMKLIIENGYYNFLSLVSKSRNKTIK 499 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + + G +W G +A K GL+D +G ++ L WN P+ Sbjct: 500 EVDKIGQGHVWIGTDALKKGLVDKLGDFDDAIIKAAELSNLSDYD--IKWNDPE 551 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 123/313 (39%), Gaps = 48/313 (15%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------- 50 + F + + ++L + + ++YF ++ + +N I I G I D Sbjct: 19 LNFTRRLVLNLLLILIIFCILILYFQTNNPINENKKGALFIDIIGIIVDKPSSSSKFKQL 78 Query: 51 -----------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQK 92 +++ I + D++ T L++ L GS + I +A+++ Sbjct: 79 SRELIGSSSNKLQENSLFDIVYAIRKAKDDNNITGLVLYLKDFAGSDQTSLQYIGKALKE 138 Query: 93 VKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 K KP+ + + + A Y ++ SNII +V G+ Y K FL KL ++ Sbjct: 139 FKKTGKPIY-SIGDNYSQAQYFLASYSNIIYLNPQGMVDLHGISTNNFYYKTFLKKLKIN 197 Query: 152 IKSVKSSPMKAEPSP-FSE-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT----- 204 + K+ P + ++ +A + + + + ++ ++S +RNI ++ Sbjct: 198 THVFRVGNYKSAVEPVLRDNMSDEAKEDDKRWIQKLWRSYLNVISINRNIKIEEIFPNVK 257 Query: 205 -----LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPP 255 L + G T A K L+D + E+ + + + ++S KI +N Sbjct: 258 EILEKLKIVKGN--TAEFALKNNLVDKIESNPEIEKEMIKIFGWNKNEKSFNKISIYNYQ 315 Query: 256 KNYWFCDLKNLSI 268 F + +++ Sbjct: 316 DKLKFSNKGEIAV 328 >gi|242398488|ref|YP_002993912.1| Putative protease [Thermococcus sibiricus MM 739] gi|242264881|gb|ACS89563.1| Putative protease [Thermococcus sibiricus MM 739] Length = 335 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 126/243 (51%), Gaps = 3/243 (1%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ E + +A + + G I+++ ++I +I I DD+ +++ + SPGG Sbjct: 83 TNRTEKANVTIAILPVVGPIDETAAFDVISKIREIRNDDNIGGVVLWIESPGGYVGPVIT 142 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I++ ++K+ KP++ MAAS GYLI+CA++ I+A + VGSIGVL+ + ++ Sbjct: 143 IYKELKKLSYEKPIVAYTGGMAASGGYLIACAADKIIADPLAEVGSIGVLYVHYDLEQNY 202 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + GV + K+ K + + ++ + +M+++ V++ + +F+++V E RN+ + T Sbjct: 203 AQNGVKVNVFKTGKYKDTGAEWRDLTEEEREMIKNEVNTYFEYFLQVVGEGRNLDLNTTR 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 DGR+W +E K L+D G + +L + +S + ++ + Sbjct: 263 KYGDGRVWFASE-VKGTLVDDTGDLDFTISALEEILNVKSANVVLYSTQKVDFGIYQSSS 321 Query: 266 LSI 268 L + Sbjct: 322 LYM 324 >gi|114799830|ref|YP_761326.1| signal peptide peptidase SppA, 67K type [Hyphomonas neptunium ATCC 15444] gi|114740004|gb|ABI78129.1| signal peptide peptidase SppA, 67K type [Hyphomonas neptunium ATCC 15444] Length = 592 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 18/271 (6%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIE----------------DSQELIERIERISR 62 + + ++ + +P +A + G I S + I + Sbjct: 276 MIDLAVYAAPTKYNSKAPLIAVVGGEGPIVTGGADGGSPFSDAPAFASDTVARAILDAAE 335 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNII 121 D+ A++ + SPGGS A + I+RA+++ K KPV+ + AAS GY +S ++ I Sbjct: 336 DEDVKAIVFRVDSPGGSPTASDQIWRAVERAKEAGKPVVVSMGAYAASGGYYVSTGADAI 395 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A +L GSIG+ + +K+GV+ SV A S ++ Sbjct: 396 LANRATLTGSIGIFGGKLALDGTFNKIGVTFDSVTVGGDFASAWGTSPFTETQEAEVKAS 455 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL- 240 + Y F+ V R++ YD+ ++ GR+WTG A + GL+D +G + + L Sbjct: 456 LKRGYDRFLNHVGAGRDMTYDEVHEVARGRVWTGEAALQQGLVDEIGTFMDAIEKAKELA 515 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 G++ ++ + P + L++L S Sbjct: 516 GIEADVKPRLAFYPYRKTGLEALEDLFGVSA 546 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 93/261 (35%), Gaps = 15/261 (5%) Query: 3 FVLKKIKTRYVMLSLVTL--------TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELI 54 F++ + ++ + ++ ++ D +P A+ G +L+ Sbjct: 18 FIIVGFFFLFTLIGVAASSKPPHPDDIILTLDLNAAYPDQAPAGGLAALSGT-PGFIDLL 76 Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEM-AASA-- 110 +++ DDS L + + G E + AIQ K K VI M +S Sbjct: 77 LKLKEAESDDSVKGLFIRGADYGFGTTRAEELREAIQSFKASGKFVIAHSQGMFGSSGPS 136 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 + A++ I + + GV+F+ + K + + + + K P+ ++E Sbjct: 137 AFHSISAADEIWMQPGTDLMVTGVVFETEFYKGLFENIDLQPQVYPFYEYKNAPNSYNET 196 Query: 170 -VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 M+ + S + + ++E R + + A ++ L+D +G Sbjct: 197 SYTEPHRMAMEALATSIWTTALEEIAEDRGTSAGQLRAALESGPKPAETALELKLVDKLG 256 Query: 229 GQEEVWQSLYALGVDQSIRKI 249 E+ ++ A + I Sbjct: 257 WPEDAEEAAIARAGNDDAEMI 277 >gi|121998030|ref|YP_001002817.1| peptidase S49 [Halorhodospira halophila SL1] gi|121589435|gb|ABM62015.1| peptidase S49 [Halorhodospira halophila SL1] Length = 316 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 18/250 (7%) Query: 32 EDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E+ PH A + I G I ++++I +ER D A +++ ++SPGGSA I Sbjct: 56 EEIGPHTAEVRIDGPIMSDSAASAEQVIRGLERAFEADDAAGVVLRINSPGGSAVHARQI 115 Query: 87 FRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 ++ I++++ PV + ++ S Y ++ A++ I E+S+VGSIGV+ + Sbjct: 116 YQEIRRLREEYEDIPVHAVIEDIGTSGAYYVAAAADQIHVNESSIVGSIGVIMGSFGIGE 175 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 L+KLG+ + + KA PF+ + V+ ++ ++D + F+ V + R D Sbjct: 176 ALEKLGIERRVYTAGDDKAFLDPFAPEDEAHVEHVRTMLDDIHGQFIAAVRDGRGEQIDA 235 Query: 203 ---KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G IWTG ++ GL D +G V + + ++ D+ +++ Sbjct: 236 AGADEDRLFSGLIWTGQQSLDKGLADEIGSVRSVARDVIG------EEELVDYTARRDFL 289 Query: 260 FCDLKNLSIS 269 + + Sbjct: 290 SQLAERFGTA 299 >gi|26247601|ref|NP_753641.1| putative periplasmic protease [Escherichia coli CFT073] gi|227886299|ref|ZP_04004104.1| S49 family SohB endopeptidase [Escherichia coli 83972] gi|300982409|ref|ZP_07176106.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|301046935|ref|ZP_07194049.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|331646595|ref|ZP_08347698.1| putative protease SohB [Escherichia coli M605] gi|331657319|ref|ZP_08358281.1| putative protease SohB [Escherichia coli TA206] gi|26108003|gb|AAN80203.1|AE016760_62 Possible protease sohB [Escherichia coli CFT073] gi|227836503|gb|EEJ46969.1| S49 family SohB endopeptidase [Escherichia coli 83972] gi|281178462|dbj|BAI54792.1| putative protease [Escherichia coli SE15] gi|300301161|gb|EFJ57546.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|300408747|gb|EFJ92285.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|307553330|gb|ADN46105.1| possible protease sohB [Escherichia coli ABU 83972] gi|315294752|gb|EFU54095.1| putative signal peptide peptidase SppA [Escherichia coli MS 153-1] gi|330911137|gb|EGH39647.1| putative protease sohB [Escherichia coli AA86] gi|331045347|gb|EGI17474.1| putative protease SohB [Escherichia coli M605] gi|331055567|gb|EGI27576.1| putative protease SohB [Escherichia coli TA206] Length = 349 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|188587314|ref|YP_001918859.1| signal peptide peptidase SppA, 36K type [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352001|gb|ACB86271.1| signal peptide peptidase SppA, 36K type [Natranaerobius thermophilus JW/NM-WN-LF] Length = 325 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 28/302 (9%) Query: 3 FVLKKIK--TRYVMLSLVTLTVVYFSWSSHVE-------DNSPHVARIAIRGQIEDSQE- 52 FVLK + ++ L+ + + + + V I + G+I ++ Sbjct: 12 FVLKALIVVGGIAAFFIIALSSFFLLGGAFISLLDADPVEEDDLVYVIDLEGEISEAAGP 71 Query: 53 -----------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 + E +++ D +A A+++ ++SPGG+ A + I I P + Sbjct: 72 GPGGLGISPRIVQESLDKAKAD-NAEAVVLRVNSPGGTVAASQEIASIIDDF--ELPTVV 128 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + + A S GY IS A++ I A +TS GSIGV+ + D LG+ ++ +K+ K Sbjct: 129 SMADSATSGGYYISAAADRIKAQDTSTTGSIGVISVMYNFQELYDNLGIEVEVIKTGEYK 188 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 F + + Q++QD+ D Y FV VS+ R++ + ++ G I TG A + Sbjct: 189 DMG--FETMTEEERQIIQDLSDEMYEHFVAEVSDYRDMDKEDVYEVATGEIMTGTAAYEQ 246 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 GL+D +GG + L + W P+ + + S L + L ++ Sbjct: 247 GLVDGLGGIDRAVDKAGELAGIEDPN--TRWLEPEGLFDQLFFPMVQESDLLELDSLSEE 304 Query: 282 TK 283 T+ Sbjct: 305 TE 306 >gi|114569418|ref|YP_756098.1| signal peptide peptidase SppA, 36K type [Maricaulis maris MCS10] gi|114339880|gb|ABI65160.1| signal peptide peptidase SppA, 36K type [Maricaulis maris MCS10] Length = 595 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 17/249 (6%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIE---------DSQELI------ERIERISRDDSATA 68 Y + ++ +N P +A I +G I +E+I E I + D+S A Sbjct: 287 YHAQAAPTWNNGPIIALIEGQGAIVTGTPTGSPFGGEEMIGGDFMSEAILAAADDNSVRA 346 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGGSA A + ++ AI + + KPVI + MAAS GY I+ ++ ++A ET+ Sbjct: 347 IVIRVDSPGGSAIASDQVWHAITRAREAGKPVIVSMASMAASGGYYIAAPADYVLAHETT 406 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 L GSIGVL ++ D +G++ +++ S E + + Y Sbjct: 407 LTGSIGVLGGKIVLEGTFDLVGLNAETIAVGGEYATAFSAQQEWTDSQRAAYRSQMSDIY 466 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F + V++ R++P ++ L ++ GRIWTGA+A +GL+D +GG + + + Sbjct: 467 DDFTQRVADGRDLPLERVLEIARGRIWTGAQALDLGLVDEIGGLRDAIGAARQFAGIDAE 526 Query: 247 RKIKDWNPP 255 +I+ P Sbjct: 527 ARIRLRRYP 535 Score = 80.6 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 96/273 (35%), Gaps = 31/273 (11%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIA----IRGQIEDSQ------------ 51 + T + + L+ + + E P A + G+++ Sbjct: 20 LLTLVLGVFLIFAMIGALVEGAQTETALPQTAMVLELDLRDGRLDSPSRSPFGFSDPLST 79 Query: 52 -ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 EL+ +ER DD L + + G S A E + AI+ + + A Sbjct: 80 VELVRTLERAESDDRVAGLFIRANEFGMSPGAAEELRGAIEDFRAAGKFVV----THAQG 135 Query: 111 -------GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 GY S+ I +T+ + G+ + ++ + + K Sbjct: 136 FEGTSVTGYFAVSGSDQIWLQDTTSFTAAGLASETMFLGGLFAHFDAVPQFEQFHEYKGA 195 Query: 164 PSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + ++ + + + + S Y V ++E R + D + + T EA+ + Sbjct: 196 ANTYTQSDFTEAHREATESFLGSIYDTAVLRIAEDRGLQADALRAMFESAPHTAEEAQSL 255 Query: 222 GLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWN 253 GLID +G E +++ A L + S +I ++ Sbjct: 256 GLIDQLGQVVEAREAVRARLDGEASFVEIAQYH 288 >gi|149920043|ref|ZP_01908517.1| signal peptide peptidase SppA, 36K type [Plesiocystis pacifica SIR-1] gi|149819140|gb|EDM78576.1| signal peptide peptidase SppA, 36K type [Plesiocystis pacifica SIR-1] Length = 884 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 16/242 (6%) Query: 37 HVARIAIRGQIED---------------SQELIERIERISRDDSATALIVSLSSPGGSAY 81 HVA + I G I+D + L + I + D A++V + SPGGS Sbjct: 569 HVAVLHIDGTIDDGISLHVPILDIDVSGAASLTKTIAALRDDPDVRAIVVRVDSPGGSVK 628 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I A+ + KPV+ + AAS GY ++ A I A T+L GSIG+ + Sbjct: 629 GAQDIAHALDLAREVKPVVISMGNQAASGGYWVATAGQYIYADATTLTGSIGIFYPKFDF 688 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FLD+ GV + SV A S + + + + +SY F+ V+E+R + Sbjct: 689 SEFLDRYGVGVDSVAIGDRAAMRSMWLANSDADREAAMRGIRASYDRFIVRVAEARAMTP 748 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-VDQSIRKIKDWNPPKNYWF 260 ++ ++ GR+W+G A +VGL+D GG E +G + S ++ + P++ Sbjct: 749 EQADAVARGRVWSGVRALEVGLVDRYGGLYEAVGRAAVMGELADSGDALEIRHYPEDPTL 808 Query: 261 CD 262 D Sbjct: 809 VD 810 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 23/231 (9%) Query: 37 HVARIAIRGQIEDSQELIERIER----ISRDDSATALIVSLSSPGGS---AYAGEAIFRA 89 V RI++ G+ D ++L E + R +++ + GS E + A Sbjct: 338 QVTRISLAGK-SDDRDLAEVVWTFDGLARRGPGV--ILLEVD---GSDFGLAQLEEVREA 391 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + + + + V+ + A++ Y ++ + + I A + GVL Y L +L Sbjct: 392 VLRYRAQGGKVVAYLEG-ASTFEYFLAASCDRIYAHPQQGLELRGVLRNTFYFGELLGRL 450 Query: 149 GVSIKSVKSSPMKAEP--SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 GV + V+ + K P + E + + + V +++ VRL+ SR Sbjct: 451 GVRAEFVRVAEYKGTPERASRGEPSAPVARANRAYVTDTWNHVVRLIGHSRARDPAVVSE 510 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPPK 256 D +WT +A+++GLI+ + EE+ L LG R ++ PPK Sbjct: 511 WIDRAVWTPEDARRMGLIEGLAWPEELDARLEGWLG-----RAVRIDAPPK 556 >gi|323187503|gb|EFZ72812.1| peptidase family S49 family protein [Escherichia coli RN587/1] Length = 349 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|215486567|ref|YP_002328998.1| putative periplasmic protease [Escherichia coli O127:H6 str. E2348/69] gi|312966800|ref|ZP_07781018.1| peptidase family S49 family protein [Escherichia coli 2362-75] gi|215264639|emb|CAS09010.1| predicted inner membrane peptidase [Escherichia coli O127:H6 str. E2348/69] gi|312288264|gb|EFR16166.1| peptidase family S49 family protein [Escherichia coli 2362-75] gi|320195715|gb|EFW70340.1| putative protease sohB [Escherichia coli WV_060327] gi|323964610|gb|EGB60083.1| peptidase S49 [Escherichia coli M863] gi|323977096|gb|EGB72183.1| peptidase S49 [Escherichia coli TW10509] gi|327253963|gb|EGE65592.1| peptidase family S49 family protein [Escherichia coli STEC_7v] Length = 349 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|194435042|ref|ZP_03067281.1| peptidase, S49 (protease IV) family [Shigella dysenteriae 1012] gi|194416699|gb|EDX32829.1| peptidase, S49 (protease IV) family [Shigella dysenteriae 1012] gi|320181714|gb|EFW56625.1| putative protease sohB [Shigella boydii ATCC 9905] gi|332098384|gb|EGJ03357.1| peptidase family S49 family protein [Shigella dysenteriae 155-74] Length = 349 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|333004586|gb|EGK24110.1| peptidase family S49 family protein [Shigella flexneri VA-6] Length = 349 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|57641099|ref|YP_183577.1| endopeptidase IV [Thermococcus kodakarensis KOD1] gi|57159423|dbj|BAD85353.1| predicted endopeptidase IV, S49 family [Thermococcus kodakarensis KOD1] Length = 334 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 114/251 (45%), Gaps = 5/251 (1%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A + I G I+D + ++I + ++ ++S +++ + SPGG Sbjct: 73 IAFLQRLVSSNQGGTTIAVVPIFGIIDDYTALQVIPLLRNLAMNESVGGVLLWIESPGGV 132 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I I+K+ KPV+ ++ AS GY I+ + IVA+ + VGSIGV++ + Sbjct: 133 VGPVINIHSEIKKLSLVKPVVAYSGDIIASGGYYIAVGAQKIVASPLAEVGSIGVIYVHY 192 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 ++ + G+ + K+ K + + ++ P+ + + ++V++ + F+ VSE RN+ Sbjct: 193 DLEKNYEMNGIKVNVFKTGKHKDMGAEWRDLTPEEREKITEMVNTYFQAFISAVSEGRNM 252 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI--KDWNPPKN 257 D+ S G W L+D +GG + L L + + KD P+ Sbjct: 253 TIDEVKNFSTGETWFAEN-VTGALVDELGGMDTAIDVLEKLMNVSGAKVVVYKDLETPEE 311 Query: 258 YWFCDLKNLSI 268 + L I Sbjct: 312 FGVYGSTALYI 322 >gi|309793256|ref|ZP_07687683.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308122843|gb|EFO60105.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 354 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 97 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 154 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 214 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 215 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 272 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 273 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 311 >gi|16129233|ref|NP_415788.1| predicted inner membrane peptidase; multicopy suppressor of htrA(degP) [Escherichia coli str. K-12 substr. MG1655] gi|24112669|ref|NP_707179.1| putative periplasmic protease [Shigella flexneri 2a str. 301] gi|30062794|ref|NP_836965.1| putative periplasmic protease [Shigella flexneri 2a str. 2457T] gi|74312359|ref|YP_310778.1| putative periplasmic protease [Shigella sonnei Ss046] gi|89108118|ref|AP_001898.1| predicted inner membrane peptidase [Escherichia coli str. K-12 substr. W3110] gi|170080949|ref|YP_001730269.1| inner membrane peptidase [Escherichia coli str. K-12 substr. DH10B] gi|170682481|ref|YP_001743913.1| putative periplasmic protease [Escherichia coli SMS-3-5] gi|191166672|ref|ZP_03028500.1| peptidase, S49 (protease IV) family [Escherichia coli B7A] gi|193062652|ref|ZP_03043746.1| peptidase, S49 (protease IV) family [Escherichia coli E22] gi|193069952|ref|ZP_03050900.1| peptidase, S49 (protease IV) family [Escherichia coli E110019] gi|194426078|ref|ZP_03058634.1| peptidase, S49 (protease IV) family [Escherichia coli B171] gi|194436931|ref|ZP_03069030.1| peptidase, S49 (protease IV) family [Escherichia coli 101-1] gi|209918511|ref|YP_002292595.1| putative periplasmic protease [Escherichia coli SE11] gi|218553824|ref|YP_002386737.1| putative periplasmic protease [Escherichia coli IAI1] gi|218694843|ref|YP_002402510.1| putative periplasmic protease [Escherichia coli 55989] gi|238900505|ref|YP_002926301.1| putative inner membrane peptidase [Escherichia coli BW2952] gi|253773731|ref|YP_003036562.1| periplasmic protease [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161352|ref|YP_003044460.1| putative periplasmic protease [Escherichia coli B str. REL606] gi|256023020|ref|ZP_05436885.1| putative periplasmic protease [Escherichia sp. 4_1_40B] gi|260843619|ref|YP_003221397.1| putative inner membrane peptidase [Escherichia coli O103:H2 str. 12009] gi|260854969|ref|YP_003228860.1| putative inner membrane peptidase [Escherichia coli O26:H11 str. 11368] gi|260867720|ref|YP_003234122.1| putative inner membrane peptidase [Escherichia coli O111:H- str. 11128] gi|293414604|ref|ZP_06657253.1| protease sohB [Escherichia coli B185] gi|293433631|ref|ZP_06662059.1| protease sohB [Escherichia coli B088] gi|300820143|ref|ZP_07100312.1| putative signal peptide peptidase SppA [Escherichia coli MS 107-1] gi|300822566|ref|ZP_07102705.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|300919452|ref|ZP_07135953.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300927778|ref|ZP_07143342.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300951917|ref|ZP_07165721.1| putative signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|300955862|ref|ZP_07168201.1| putative signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|301022792|ref|ZP_07186634.1| putative signal peptide peptidase SppA [Escherichia coli MS 196-1] gi|301647234|ref|ZP_07247053.1| putative signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|307137909|ref|ZP_07497265.1| putative periplasmic protease [Escherichia coli H736] gi|307309975|ref|ZP_07589625.1| Peptidase S49 domain protein [Escherichia coli W] gi|331641830|ref|ZP_08342965.1| putative protease SohB [Escherichia coli H736] gi|331667656|ref|ZP_08368520.1| putative protease SohB [Escherichia coli TA271] gi|331672799|ref|ZP_08373585.1| putative protease SohB [Escherichia coli TA280] gi|331677049|ref|ZP_08377745.1| putative protease SohB [Escherichia coli H591] gi|84028736|sp|P0AG14|SOHB_ECOLI RecName: Full=Probable protease sohB gi|84028737|sp|P0AG15|SOHB_SHIFL RecName: Full=Probable protease sohB gi|1742067|dbj|BAA14809.1| predicted inner membrane peptidase [Escherichia coli str. K12 substr. W3110] gi|1787527|gb|AAC74354.1| predicted inner membrane peptidase; multicopy suppressor of htrA(degP) [Escherichia coli str. K-12 substr. MG1655] gi|24051584|gb|AAN42886.1| putative protease [Shigella flexneri 2a str. 301] gi|30041042|gb|AAP16772.1| putative protease [Shigella flexneri 2a str. 2457T] gi|73855836|gb|AAZ88543.1| putative protease [Shigella sonnei Ss046] gi|169888784|gb|ACB02491.1| predicted inner membrane peptidase [Escherichia coli str. K-12 substr. DH10B] gi|170520199|gb|ACB18377.1| peptidase, S49 (protease IV) family [Escherichia coli SMS-3-5] gi|190903321|gb|EDV63042.1| peptidase, S49 (protease IV) family [Escherichia coli B7A] gi|192931774|gb|EDV84374.1| peptidase, S49 (protease IV) family [Escherichia coli E22] gi|192956705|gb|EDV87160.1| peptidase, S49 (protease IV) family [Escherichia coli E110019] gi|194416133|gb|EDX32399.1| peptidase, S49 (protease IV) family [Escherichia coli B171] gi|194423914|gb|EDX39902.1| peptidase, S49 (protease IV) family [Escherichia coli 101-1] gi|209911770|dbj|BAG76844.1| putative protease [Escherichia coli SE11] gi|218351575|emb|CAU97287.1| putative inner membrane peptidase [Escherichia coli 55989] gi|218360592|emb|CAQ98150.1| putative inner membrane peptidase [Escherichia coli IAI1] gi|238862494|gb|ACR64492.1| predicted inner membrane peptidase [Escherichia coli BW2952] gi|253324775|gb|ACT29377.1| Peptidase S49 domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973253|gb|ACT38924.1| predicted inner membrane peptidase [Escherichia coli B str. REL606] gi|253977467|gb|ACT43137.1| predicted inner membrane peptidase [Escherichia coli BL21(DE3)] gi|257753618|dbj|BAI25120.1| predicted inner membrane peptidase [Escherichia coli O26:H11 str. 11368] gi|257758766|dbj|BAI30263.1| predicted inner membrane peptidase [Escherichia coli O103:H2 str. 12009] gi|257764076|dbj|BAI35571.1| predicted inner membrane peptidase [Escherichia coli O111:H- str. 11128] gi|260449598|gb|ACX40020.1| Peptidase S49 domain protein [Escherichia coli DH1] gi|281600693|gb|ADA73677.1| putative protease sohB [Shigella flexneri 2002017] gi|291324450|gb|EFE63872.1| protease sohB [Escherichia coli B088] gi|291434662|gb|EFF07635.1| protease sohB [Escherichia coli B185] gi|299881093|gb|EFI89304.1| putative signal peptide peptidase SppA [Escherichia coli MS 196-1] gi|300317264|gb|EFJ67048.1| putative signal peptide peptidase SppA [Escherichia coli MS 175-1] gi|300413474|gb|EFJ96784.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300448861|gb|EFK12481.1| putative signal peptide peptidase SppA [Escherichia coli MS 116-1] gi|300464171|gb|EFK27664.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300524982|gb|EFK46051.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|300527298|gb|EFK48360.1| putative signal peptide peptidase SppA [Escherichia coli MS 107-1] gi|301074596|gb|EFK89402.1| putative signal peptide peptidase SppA [Escherichia coli MS 146-1] gi|306909693|gb|EFN40187.1| Peptidase S49 domain protein [Escherichia coli W] gi|309701570|emb|CBJ00877.1| probable protease [Escherichia coli ETEC H10407] gi|313649460|gb|EFS13891.1| peptidase family S49 family protein [Shigella flexneri 2a str. 2457T] gi|313848613|emb|CAQ31775.2| predicted inner membrane peptidase [Escherichia coli BL21(DE3)] gi|315060522|gb|ADT74849.1| predicted inner membrane peptidase [Escherichia coli W] gi|315135908|dbj|BAJ43067.1| putative periplasmic protease [Escherichia coli DH1] gi|315619350|gb|EFU99894.1| peptidase family S49 family protein [Escherichia coli 3431] gi|320199306|gb|EFW73897.1| putative protease sohB [Escherichia coli EC4100B] gi|323153297|gb|EFZ39555.1| peptidase family S49 family protein [Escherichia coli EPECa14] gi|323162368|gb|EFZ48223.1| peptidase family S49 family protein [Escherichia coli E128010] gi|323168246|gb|EFZ53931.1| peptidase family S49 family protein [Shigella sonnei 53G] gi|323172373|gb|EFZ58010.1| peptidase family S49 family protein [Escherichia coli LT-68] gi|323179777|gb|EFZ65338.1| peptidase family S49 family protein [Escherichia coli 1180] gi|323185570|gb|EFZ70931.1| peptidase family S49 family protein [Escherichia coli 1357] gi|323378915|gb|ADX51183.1| Peptidase S49 domain protein [Escherichia coli KO11] gi|323937593|gb|EGB33861.1| peptidase S49 [Escherichia coli E1520] gi|323942386|gb|EGB38556.1| peptidase S49 [Escherichia coli E482] gi|323947448|gb|EGB43452.1| peptidase S49 [Escherichia coli H120] gi|323962572|gb|EGB58152.1| peptidase S49 [Escherichia coli H489] gi|323973488|gb|EGB68674.1| peptidase S49 [Escherichia coli TA007] gi|324018879|gb|EGB88098.1| putative signal peptide peptidase SppA [Escherichia coli MS 117-3] gi|331038628|gb|EGI10848.1| putative protease SohB [Escherichia coli H736] gi|331065241|gb|EGI37136.1| putative protease SohB [Escherichia coli TA271] gi|331070020|gb|EGI41389.1| putative protease SohB [Escherichia coli TA280] gi|331075738|gb|EGI47036.1| putative protease SohB [Escherichia coli H591] gi|332342864|gb|AEE56198.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332757924|gb|EGJ88251.1| peptidase family S49 family protein [Shigella flexneri 4343-70] gi|332759393|gb|EGJ89701.1| peptidase family S49 family protein [Shigella flexneri 2747-71] gi|332760366|gb|EGJ90656.1| peptidase family S49 family protein [Shigella flexneri K-671] gi|333005723|gb|EGK25241.1| peptidase family S49 family protein [Shigella flexneri K-218] gi|333007608|gb|EGK27086.1| peptidase family S49 family protein [Shigella flexneri K-272] gi|333019108|gb|EGK38398.1| peptidase family S49 family protein [Shigella flexneri K-304] gi|333019542|gb|EGK38822.1| peptidase family S49 family protein [Shigella flexneri K-227] Length = 349 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|332767506|gb|EGJ97700.1| peptidase S49 family protein [Shigella flexneri 2930-71] Length = 339 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 82 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 139 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 140 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 199 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 200 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 257 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 258 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 296 >gi|157160777|ref|YP_001458095.1| putative periplasmic protease [Escherichia coli HS] gi|170020364|ref|YP_001725318.1| putative periplasmic protease [Escherichia coli ATCC 8739] gi|188492727|ref|ZP_02999997.1| peptidase, S49 (protease IV) family [Escherichia coli 53638] gi|312971461|ref|ZP_07785636.1| peptidase family S49 family protein [Escherichia coli 1827-70] gi|157066457|gb|ABV05712.1| peptidase, S49 (protease IV) family [Escherichia coli HS] gi|169755292|gb|ACA77991.1| Peptidase S49 domain protein [Escherichia coli ATCC 8739] gi|188487926|gb|EDU63029.1| peptidase, S49 (protease IV) family [Escherichia coli 53638] gi|310336058|gb|EFQ01258.1| peptidase family S49 family protein [Escherichia coli 1827-70] Length = 349 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|239814389|ref|YP_002943299.1| peptidase S49 [Variovorax paradoxus S110] gi|239800966|gb|ACS18033.1| peptidase S49 [Variovorax paradoxus S110] Length = 347 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 10/284 (3%) Query: 7 KIKTRYVMLSL-VTLTVVYFSWSS-HVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K TR L+ + L + S S+ + H A + I+G+I + ++ ++ ++ Sbjct: 64 KTFTRLSWLAFFIFLVWLAMSRSTPSTAKTTAHTAVVEIKGEIANGGDASAEFVVAAMKT 123 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCA 117 D+ A +++ ++SPGGS I I+++K +KP+ V E ASA Y I+ A Sbjct: 124 AFEDEGAKGIVLLINSPGGSPVQAGIISDEIKRLKAKHKKPIYAVVEETCASAAYYIAAA 183 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL ++K+GV + + + K PFS ++ Sbjct: 184 TDKIFVDKASIVGSIGVLMDGFGFTGVMEKVGVERRLLTAGENKGFLDPFSPMSDAQRAH 243 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q +++ + F+ +V R T L G W+G +A + GL D +G + V + Sbjct: 244 AQAMLNQIHTQFINVVKNGRGDRLKLDTPGLFSGLFWSGEQAVEFGLADQLGNVDFVARE 303 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + + + F + L+ P ++ Sbjct: 304 VIKAEEVTDYTRRDNVAEKLAKKFGAAMGAATVRSLQSATPALR 347 >gi|300904131|ref|ZP_07122004.1| putative signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|301304778|ref|ZP_07210884.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|300403896|gb|EFJ87434.1| putative signal peptide peptidase SppA [Escherichia coli MS 84-1] gi|300839899|gb|EFK67659.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|315252503|gb|EFU32471.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 349 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|84515710|ref|ZP_01003071.1| peptidase, family S49 [Loktanella vestfoldensis SKA53] gi|84510152|gb|EAQ06608.1| peptidase, family S49 [Loktanella vestfoldensis SKA53] Length = 263 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 10/247 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++P VA I ++G I +S L IE+ A+ + ++ PGGS Sbjct: 6 FTKSAPFVAVIRLQGAISNSGRGLDDPGLAPVIEKAFSKGKPAAVALEINCPGGSPVQSS 65 Query: 85 AIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I I+++ + K PV V ++AAS GY ++CA++ I S+ GSIGV+ Sbjct: 66 LIASRIRRLADEKKIPVFAFVEDVAASGGYWLACAADEIFIDACSITGSIGVISAGFGAH 125 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +D+ G+ + + K+ PF NP V+ ++ +D + F+ V R + Sbjct: 126 EAIDRYGIERRVHTAGKSKSLLDPFKPQNPADVKKLKGWLDDLHATFIAYVKSRRGLKLS 185 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 L G ++ G + GL+D +G V ++ + V R+ P + Sbjct: 186 DDPDLFTGEVYIGQKGIDAGLVDGIGHLAPVMKARFGDKV--KFRRYGQRKPLLARFGAQ 243 Query: 263 LKNLSIS 269 + + SI+ Sbjct: 244 IVDDSIA 250 >gi|110633065|ref|YP_673273.1| peptidase S49 [Mesorhizobium sp. BNC1] gi|110284049|gb|ABG62108.1| peptidase S49 [Chelativorans sp. BNC1] Length = 286 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 23/280 (8%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGS 79 + +S + + + G I + + +E+ SA A+ +S++SPGGS Sbjct: 12 SLRSDSVTIPVVRLHGTIMAGGSPMRQSLSLASTAGLLEKAFS-FSAPAVAISINSPGGS 70 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I+R I+ + +K V V ++AAS GY+I+ A + I++ +S+VGSIGV+ Sbjct: 71 PVQSRLIYRRIRDLAEERKKNVFVFVEDIAASGGYMIALAGDEIISDPSSIVGSIGVVSA 130 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + K+GV + S KA PF + V+ ++ + + + F+ LV E R Sbjct: 131 GFGFQDLIKKIGVERRVHTSGRNKAILDPFQPEKEEDVERLKALQEEVHQTFISLVRERR 190 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L G WTG +GL+D VG + Y ++K +PP+ Sbjct: 191 GAKLANDDDLFTGLFWTGERGLSLGLVDAVGDMRSFLKHRYG-----EKTRLKLVSPPRG 245 Query: 258 YW-----FCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + F L L++ + Q LW + Sbjct: 246 LFGRRLGFFGLDMKETDIAAAAASGLVQALEEQALWRRYG 285 >gi|24349038|gb|AAN55947.1|AE015732_5 sohB protein, peptidase U7 family [Shewanella oneidensis MR-1] Length = 342 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 92 GESKGKVFVVDFKGSIDAAEVASLREEISAILTIAE--KGDEVVVNVESGGGMVHGYGLA 149 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 150 SSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLL 209 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + Q Q ++ ++ F VS+ R P Sbjct: 210 KKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLA 267 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++GLID + ++V L +R Sbjct: 268 KVATGEHWYGQQAIELGLIDAISTSDDVLMHLAGERTVYKLR 309 >gi|320659187|gb|EFX26776.1| putative inner membrane peptidase [Escherichia coli O55:H7 str. USDA 5905] Length = 349 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVSTDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|15801907|ref|NP_287927.1| putative periplasmic protease [Escherichia coli O157:H7 EDL933] gi|15831098|ref|NP_309871.1| periplasmic protease [Escherichia coli O157:H7 str. Sakai] gi|168751161|ref|ZP_02776183.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4113] gi|168758357|ref|ZP_02783364.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4401] gi|168763580|ref|ZP_02788587.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4501] gi|168771271|ref|ZP_02796278.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4486] gi|168775081|ref|ZP_02800088.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4196] gi|168783775|ref|ZP_02808782.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4076] gi|168790072|ref|ZP_02815079.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC869] gi|168801619|ref|ZP_02826626.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC508] gi|195939206|ref|ZP_03084588.1| putative periplasmic protease [Escherichia coli O157:H7 str. EC4024] gi|208811051|ref|ZP_03252884.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4206] gi|208815761|ref|ZP_03256940.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4045] gi|208819606|ref|ZP_03259926.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4042] gi|209397450|ref|YP_002270326.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4115] gi|217329117|ref|ZP_03445197.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. TW14588] gi|254792860|ref|YP_003077697.1| putative periplasmic protease [Escherichia coli O157:H7 str. TW14359] gi|261224254|ref|ZP_05938535.1| predicted inner membrane peptidase [Escherichia coli O157:H7 str. FRIK2000] gi|261257490|ref|ZP_05950023.1| predicted inner membrane peptidase [Escherichia coli O157:H7 str. FRIK966] gi|291282359|ref|YP_003499177.1| Peptidase, S49 (Protease IV) family [Escherichia coli O55:H7 str. CB9615] gi|331652312|ref|ZP_08353331.1| putative protease SohB [Escherichia coli M718] gi|12515525|gb|AAG56543.1|AE005380_2 putative protease [Escherichia coli O157:H7 str. EDL933] gi|13361309|dbj|BAB35267.1| putative protease [Escherichia coli O157:H7 str. Sakai] gi|187769295|gb|EDU33139.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4196] gi|188014793|gb|EDU52915.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4113] gi|188998931|gb|EDU67917.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4076] gi|189354830|gb|EDU73249.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4401] gi|189359971|gb|EDU78390.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4486] gi|189366260|gb|EDU84676.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4501] gi|189370448|gb|EDU88864.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC869] gi|189376289|gb|EDU94705.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC508] gi|208724557|gb|EDZ74265.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4206] gi|208732409|gb|EDZ81097.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4045] gi|208739729|gb|EDZ87411.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4042] gi|209158850|gb|ACI36283.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. EC4115] gi|209771988|gb|ACI84306.1| putative protease [Escherichia coli] gi|209771990|gb|ACI84307.1| putative protease [Escherichia coli] gi|209771992|gb|ACI84308.1| putative protease [Escherichia coli] gi|209771994|gb|ACI84309.1| putative protease [Escherichia coli] gi|209771996|gb|ACI84310.1| putative protease [Escherichia coli] gi|217317556|gb|EEC25984.1| peptidase, S49 (protease IV) family [Escherichia coli O157:H7 str. TW14588] gi|254592260|gb|ACT71621.1| predicted inner membrane peptidase [Escherichia coli O157:H7 str. TW14359] gi|290762232|gb|ADD56193.1| Peptidase, S49 (Protease IV) family [Escherichia coli O55:H7 str. CB9615] gi|320189977|gb|EFW64629.1| putative protease sohB [Escherichia coli O157:H7 str. EC1212] gi|320637166|gb|EFX06992.1| putative inner membrane peptidase [Escherichia coli O157:H7 str. G5101] gi|320642532|gb|EFX11780.1| putative inner membrane peptidase [Escherichia coli O157:H- str. 493-89] gi|320647885|gb|EFX16593.1| putative inner membrane peptidase [Escherichia coli O157:H- str. H 2687] gi|320653487|gb|EFX21592.1| putative inner membrane peptidase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663980|gb|EFX31167.1| putative inner membrane peptidase [Escherichia coli O157:H7 str. LSU-61] gi|326341068|gb|EGD64861.1| putative protease sohB [Escherichia coli O157:H7 str. 1125] gi|326343309|gb|EGD67076.1| putative protease sohB [Escherichia coli O157:H7 str. 1044] gi|331050590|gb|EGI22648.1| putative protease SohB [Escherichia coli M718] Length = 349 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVSTDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|262068058|ref|ZP_06027670.1| protease IV [Fusobacterium periodonticum ATCC 33693] gi|291378237|gb|EFE85755.1| protease IV [Fusobacterium periodonticum ATCC 33693] Length = 551 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 112/223 (50%), Gaps = 11/223 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAVINLEGEIDIRESRETVINYDNVVEKLDALEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A+ +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EIPIYISMGDLCASGGYYIATVGKKLFASPVTLTGSIGVVI 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP +DKL V+++ FS+++ ++ + + ++ Y F V E+ Sbjct: 391 LYPEFSEAIDKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIVYSMNEVYSEFKAHVMEA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 RNI + ++ GR+W G++AK+ GL+D +G + SL Sbjct: 451 RNINEEDLEKIAGGRVWLGSQAKENGLVDELGTLNDCIDSLAK 493 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 26/264 (9%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 +K K + V +SL + V F+ VED V+ I+I + +++ +E + D Sbjct: 30 RKFKNKDV-ISLKGVKTVVFNIGDLVEDY--MVSAISINKAL-SHDIVLKALENLVDDKK 85 Query: 66 ATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 +I+ + E I +K+ K +I + Y I+ ++ I Sbjct: 86 IEKIIIDVD----EVDLSRVHIEEIKEIFKKLSVDKEIIA-IGTTFDEYSYQIALLADKI 140 Query: 122 VAAETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAV 175 T S G ++ PY K L LGV++ ++ K FS ++ + Sbjct: 141 YMLNTKQ--SCLYFRGYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFSHDKMTEEKK 198 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQEEV 233 + + ++ ++ + F+ LV E R + T + G + +AK++GLID V EE+ Sbjct: 199 ESLMNIKETLFQNFINLVKEKRKVDI--TNEILSGDLIFANSEKAKELGLIDGVSTYEEI 256 Query: 234 WQSLYALGVDQSIRKIKDWNPPKN 257 VD + I + KN Sbjct: 257 GVDYDEDTVDF-VEYISAYKRKKN 279 >gi|229220628|ref|NP_718503.2| putative periplasmic protease [Shewanella oneidensis MR-1] Length = 338 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 88 GESKGKVFVVDFKGSIDAAEVASLREEISAILTIAE--KGDEVVVNVESGGGMVHGYGLA 145 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 146 SSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLL 205 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + Q Q ++ ++ F VS+ R P Sbjct: 206 KKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLA 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++GLID + ++V L +R Sbjct: 264 KVATGEHWYGQQAIELGLIDAISTSDDVLMHLAGERTVYKLR 305 >gi|331682759|ref|ZP_08383378.1| putative protease SohB [Escherichia coli H299] gi|331080390|gb|EGI51569.1| putative protease SohB [Escherichia coli H299] Length = 349 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLNIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|254464567|ref|ZP_05077978.1| peptidase S49 [Rhodobacterales bacterium Y4I] gi|206685475|gb|EDZ45957.1| peptidase S49 [Rhodobacterales bacterium Y4I] Length = 279 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 14/236 (5%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P VA + + G I L +ER R A+ + ++SPGGS Sbjct: 23 KRQPLVAVVRLNGAIGMPGRGSLSDAALAPILERAFRKGKPAAVALEINSPGGSPVQSSL 82 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ PV V ++AAS GY ++ A++ I A +S++GS+GV+ Sbjct: 83 IGARIRRLAKELGIPVYAFVEDVAASGGYWLAAAADEIWADASSVLGSVGVISAGFGAHV 142 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L + GV + + K+ PF NP+ VQ ++ +++ + F+ V+E R Sbjct: 143 LLARQGVERRVYTAGESKSMLDPFRPENPEDVQRLKVILNDIHANFIDHVTERRGAKLKN 202 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G IW A+++GLID +G + Q + V + + + K +W Sbjct: 203 DENLFTGEIWLARRAEELGLIDGIGHLKPKMQERFGEKV-----RFRRYGLKKPFW 253 >gi|83859154|ref|ZP_00952675.1| putative protease IV [Oceanicaulis alexandrii HTCC2633] gi|83852601|gb|EAP90454.1| putative protease IV [Oceanicaulis alexandrii HTCC2633] Length = 623 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 11/250 (4%) Query: 35 SPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEA 85 S + I G I D E I R DD A+++ + S GGSA+A E Sbjct: 325 SDKIVVIKAVGGIVDGNGDGGVIGGDQHAELIRRARLDDDVRAIVLRIDSGGGSAFASEL 384 Query: 86 IFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++ + K VI + +AAS GY I+ ++ I A T++ GSIG+ P + Sbjct: 385 IREELEMARLEGKIVIASMGGVAASGGYWIATPAHEIWAEPTTITGSIGIFGFIPTFEDS 444 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L ++GV + + +PS F V + ++Q +++ Y F+ +V+ESRN+ D+ Sbjct: 445 LAEIGVYEDGIALTETARQPSQFGGVTEEWDTILQSSIEAGYERFLSIVAESRNMTRDEV 504 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEE-VWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GRIWTG +A GL+D +GG +E + + G+++ ++ ++ + + L Sbjct: 505 DAVAQGRIWTGQQAFDRGLVDQLGGYDEAIAAAAARAGLEEGDYRVIEFRDEVDPFHQFL 564 Query: 264 KNLSISSLLE 273 + S+ + Sbjct: 565 QMFGQSAGVA 574 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 95/280 (33%), Gaps = 43/280 (15%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS---------------- 50 +I +V+L L+ + + + E V A G + + Sbjct: 24 RIFGIFVILFLLIVFIGGLLSNDEFELADSGVLIFAPEGPVVEEPTTISPNDAFTASLLG 83 Query: 51 ---------QELIERIERISRDDSATALIVSLSS-PGGSAYAGEAIFRAIQKVKNRKPVI 100 +++E R + DD T ++++L GG A I + ++ I Sbjct: 84 GGPGSEVLLSDVVEGFRRATEDDDVTTIVMNLERFGGGYPAALHQIAHEMDAFRDAGKEI 143 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + + GY ++ ++ I + G + + L++L V++ + Sbjct: 144 IVYGDNYSMTGYFLASHASQIYLHDMGGANVNGYAVYRTFFRSLLERLNVTVNVYRVGTF 203 Query: 161 KAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--------- 209 K+ P+ E++ A + + V ++ + V +R + +D Sbjct: 204 KSALEPYLGDEMSEPAAEANRYVFGDLWNAYQDSVEAARGLSDGALQTYADQFPELLVAQ 263 Query: 210 -GRIWTGAEAKKVGLIDVV---GGQEEVWQSLYALGVDQS 245 G T A + GL+D V G ++ + + + Sbjct: 264 GGD--TAAVSLNEGLVDEVIGRGHYRDLLEERFGRDESED 301 >gi|84685232|ref|ZP_01013131.1| peptidase, family S49 [Maritimibacter alkaliphilus HTCC2654] gi|84666964|gb|EAQ13435.1| peptidase, family S49 [Rhodobacterales bacterium HTCC2654] Length = 264 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 15/234 (6%) Query: 35 SPHVARIAIRGQIEDSQE-------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 P VA I + G I + IER R A+ +S++SPGGS I Sbjct: 11 DPTVAVIRLHGSISTGTRGQLNDVAMAGPIERAFR-RKPKAVALSINSPGGSPVQSSLIA 69 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K PV V + AAS GY ++CA++ I A +S++GSIGV+ F+ Sbjct: 70 ARIRRLADEKEVPVYAFVEDAAASGGYWLACAADEIYADRSSILGSIGVIMASFGAHEFI 129 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K G+ + S K++ PF +PK V+ ++ V + F+ V +R Sbjct: 130 AKHGIERRVYTSGESKSQLDPFKPEDPKDVERIKAVGSEIHEAFIEHVKAARKDKLADDP 189 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G W G +A +GL D +G + + V K P K+ + Sbjct: 190 SLFTGEFWVGQKAVDLGLADGIGHLVPFMKEKFGKDV-----KFAVLGPKKSLF 238 >gi|119775254|ref|YP_927994.1| putative periplasmic protease [Shewanella amazonensis SB2B] gi|119767754|gb|ABM00325.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella amazonensis SB2B] Length = 337 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 12/235 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAG 83 + + P + +G I D+ E+ E IS + +++++ S GG + Sbjct: 82 AEKQDKPKPRTFVLDFKGSI-DAHEVASLREEISAILTIAEKGDEVLLNVESGGGMVHGY 140 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ P+ + ++AAS GY+++C +N I AA ++VGSIGV+ Q P Sbjct: 141 GLAASQLDRLRQADIPLTACIDKVAASGGYMMACVANRIYAAPFAIVGSIGVVAQLPNFN 200 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + K + F E + Q ++ ++ ++ F VS+ R P Sbjct: 201 RLLKKHDIDYEQHTAGDFKRTLTLFGENTEEGRQKFREELEETHQLFKAFVSKYR--PEL 258 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ G W G +A +GL+D + +++ + D+++ K++ + P K Sbjct: 259 DLDKVATGEHWYGQQALDLGLVDSISTSDDLMLTAAK---DRTLIKLR-YQPRKK 309 >gi|166032602|ref|ZP_02235431.1| hypothetical protein DORFOR_02317 [Dorea formicigenerans ATCC 27755] gi|166026959|gb|EDR45716.1| hypothetical protein DORFOR_02317 [Dorea formicigenerans ATCC 27755] Length = 325 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 21/227 (9%) Query: 35 SPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGSA 80 ++ + + G I++ ++ I+ + D +++ + SPGG+ Sbjct: 53 DDYIGVVNVVGTIQEQTQSSVLDTSSGYQHNTTMDYIDNLMDDSDNKGILLYVDSPGGAV 112 Query: 81 YAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 Y E + + + K +P+ T + AAS GY+ S + I A + ++ GSIGV+ Sbjct: 113 YESEELHDKLIEYKETTGRPIWTYMAHYAASGGYMTSVTGDKIYANKNTVTGSIGVIMSG 172 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +KLG+ S+ S K S++ + V + Q VD Y FV +V++ R+ Sbjct: 173 YDMSGLYEKLGIRYVSITSGVNKDS----SKLTDEQVAIYQSQVDECYQEFVNIVADGRD 228 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQ 244 + D+ L+DGR +T +AK GLID + ++V + LGVD+ Sbjct: 229 MSADQVKALADGRTYTAKQAKANGLIDEIATYQDVMNQMASELGVDE 275 >gi|119720728|ref|YP_921223.1| signal peptide peptidase SppA, 36K type [Thermofilum pendens Hrk 5] gi|119525848|gb|ABL79220.1| signal peptide peptidase SppA, 36K type [Thermofilum pendens Hrk 5] Length = 307 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 136/293 (46%), Gaps = 20/293 (6%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----------QELIERIERI 60 V + ++ +V + +P++A+I I+G I+ + +E I+ +++ Sbjct: 17 IVAVVILGAVLVLLRQGATQTRLTPYIAQITIKGTIDYASSSIFGATPGVEEYIKLVKQA 76 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D A A+++ SPGG+ A + +++A++++ +K V++ + AS Y+ + S Sbjct: 77 EEDPMAKAVLLVFDSPGGTVTASDELYQAVKELSQKKVVVSYAKGLLASGAYMAALPSRA 136 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+A+ TS VGS+GV+ V L K+GV++ + KS +K SP+ + + +++++ Sbjct: 137 ILASPTSEVGSVGVIVTVLNVGNLLGKIGVTVYTFKSGELKDVGSPYRPMTEEDAKVLEE 196 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +V+ + F V E R + + + GR +T +A + GLID V +E AL Sbjct: 197 MVNYYFGLFKGRVLEHRG---NVSSEVFSGRPFTPDKALQAGLIDKVCTYQEAVNYTRAL 253 Query: 241 GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 ++ + P L + IP + + +W P Sbjct: 254 ANLPETAEVVELKPRTPTLLDLLLGTYSGAGNRLVIPSI------VVLYMWPP 300 >gi|13476173|ref|NP_107743.1| proteinase [Mesorhizobium loti MAFF303099] gi|14026933|dbj|BAB53529.1| probable proteinase [Mesorhizobium loti MAFF303099] Length = 286 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 13/268 (4%) Query: 37 HVARIAIRGQIEDSQELIER---------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I + G I + + IE+ D A A+ +S++SPGGS IF Sbjct: 19 TIPVIRLHGTIMAGGQFRQNLSLASTAGLIEKAFSFD-APAVAISINSPGGSPVQSRLIF 77 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + K V+ V ++AAS GY+I+ A + I A +S+VGSIGV+ + Sbjct: 78 RRIRDLAAEKNKKVLVFVEDVAASGGYMIAVAGDEIFADPSSIVGSIGVVSASFGFPELM 137 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + KA PF + V+ ++ + + F+ LV E R Sbjct: 138 KKIGVERRVHTAGQNKAVLDPFKPEKKEDVERLKALQLEVHETFIDLVKERRGTKLKDDP 197 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG + ++GL+D +G V ++ + + + F K Sbjct: 198 DLFTGLFWTGKKGLELGLVDALGDMRTVLKTRFGAKTQLRLITAPRGFLGRFGLFGSSKG 257 Query: 266 LSISSL-LEDTIPLMKQTKVQGLWAVWN 292 S + ++ + + LWA + Sbjct: 258 FSAPDIAAAAASGVIDAAEERALWARFG 285 >gi|188582538|ref|YP_001925983.1| peptidase S49 [Methylobacterium populi BJ001] gi|179346036|gb|ACB81448.1| peptidase S49 [Methylobacterium populi BJ001] Length = 286 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 19/267 (7%) Query: 37 HVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 VA + + G I + +ER +A+ + ++SPGGS I+ Sbjct: 23 RVAVVRLSGAIGAVSPIRPGLSIATVAPSLERAFSMPGLSAVALVVNSPGGSPVQSHLIY 82 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + K V V + AAS GY+I+CA++ IVA SLVGSIGV+ + Sbjct: 83 RRIRALAAEKEVRVFAFVEDAAASGGYMIACAADEIVADPASLVGSIGVVSAGFGFDRLI 142 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +++G+ + KA PF NP+ + ++++ F LV E R D + Sbjct: 143 ERIGIERRVHTQGEAKAMLDPFRPENPEDIVRLKEIQADVQALFTGLVRERRP-GLDASR 201 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G +WTG +A ++GL+D +G ++ Y VD ++ + W L Sbjct: 202 DLFTGAVWTGRQALELGLVDALGDLRTTLRARYGEKVD-----LRLVAENRGSWLARLLR 256 Query: 266 LSISSLLEDTIP--LMKQTKVQGLWAV 290 + +P L+ + + WA Sbjct: 257 RAGPGQTAAGLPDALIAAVEERAAWAR 283 >gi|301019499|ref|ZP_07183668.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] gi|300399240|gb|EFJ82778.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] Length = 349 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLNIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|296328845|ref|ZP_06871356.1| S49 family protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153966|gb|EFG94773.1| S49 family protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 551 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 129/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--DIPIYISMGDLCASGGYYIATVGKRLFANPVTLTGSIGVVI 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ S+++ ++ + + ++ Y F V E+ Sbjct: 391 LYPEFTETINKLKVNMEGFSKGKGFDIFDVSSKLSEESKEKIIYSMNEVYSEFKEHVMEA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK+ GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGSLNDCINSLVK-DLELKDFKLTYIRGRK 509 Query: 257 NYWFCD--LKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 510 SIMEVVSAMKPQFIKSDIIEKIEMLKSYSNKILYY 544 Score = 79.8 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 104/243 (42%), Gaps = 25/243 (10%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+L K+K + +SL + V F+ + VED ++ ++I + + +++ +E + Sbjct: 27 FILGKLKNKDK-VSLKGVKTVVFNLNELVEDY--MISTVSINKTL-SHEAVLKALENLVN 82 Query: 63 DDSATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D +I+ + E + +K+ K +I + Y ++ + Sbjct: 83 DKKIEKIIIDVD----EVDLSRVHIEELKEIFEKLSVNKEIIA-IGTTFDEYSYQVALLA 137 Query: 119 NIIVAAETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNP 172 N I T S G ++ PY K L LG+++ ++ K FS +++ Sbjct: 138 NKIYMLNTKQ--SCLYFRGYEYKEPYFKNILANLGITVNTLHIGDYKVAGESFSNDKMSE 195 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQ 230 + + + ++ ++ + F+ LV E R + T + G + +A ++GLID + Sbjct: 196 EKKESLINIKETLFQNFINLVKEKRKVDI--TNEIFSGDLIFANSEKAIQLGLIDGLSTY 253 Query: 231 EEV 233 EE+ Sbjct: 254 EEI 256 >gi|258652617|ref|YP_003201773.1| signal peptide peptidase SppA, 36K type [Nakamurella multipartita DSM 44233] gi|258555842|gb|ACV78784.1| signal peptide peptidase SppA, 36K type [Nakamurella multipartita DSM 44233] Length = 561 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 16/238 (6%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSA-------------TALIVSLSSPGGSAYAG 83 HVA + I+G I+ + + R + D+ A+++ + SPGGSA A Sbjct: 273 HVALVTIQGTIDSGRSRRGLMGRTAGSDTVGAALRAAAADERARAVVLRVDSPGGSAVAS 332 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I+R + ++ KPVI + +AAS GY ++C ++ IVA +L GSIGV V+ Sbjct: 333 ETIWREVCLLQRAKPVIVAMGAVAASGGYYVACPADRIVALPATLTGSIGVFGGKVVVQE 392 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + +LG+S SV+ S + + +D+ Y FV V++ R + Sbjct: 393 LMTRLGLSAGSVQRGAHARMFSSRRPFDEDEKTNLAAGLDAIYDDFVGKVAQGRGRSTGQ 452 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKDWNPPKNY 258 ++ GR+WTG +A GL+D +GG + ++ L D +R P + Sbjct: 453 IEAVARGRVWTGRDAVAAGLVDELGGLRDAVRLARARGGLAPDAPVRPAIRLGPLARF 510 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 17/211 (8%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKV 93 +AR+ RG+ D + + + + D L+ + GG S + ++ Sbjct: 31 LARLRQRGR-RDLRATLRALHEAADDPRVVGLVARV---GGPLPWSVMQ--ELRAGVRAF 84 Query: 94 KNR-KPVITEVHEMA----ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 KP + A A AGY+++ A + + VG +GV + +++ LDKL Sbjct: 85 AAGGKPTLAWAQTFAEQPGAMAGYVLATAFDELWLQPGGEVGLLGVALETTFLRGSLDKL 144 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 G+ + + K +E + + VV S + V +++ R + + Sbjct: 145 GLQPQLDQRHEYKNAADTIMRTEYTRAHREALDRVVGSVFDDAVEAIAQGRRLDPAQVRT 204 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 L DG A+ GL+D +G ++E ++ Sbjct: 205 LVDGGPTLAPAARDAGLVDRLGYRDEALAAM 235 >gi|218704795|ref|YP_002412314.1| putative periplasmic protease [Escherichia coli UMN026] gi|293404813|ref|ZP_06648805.1| periplasmic protease [Escherichia coli FVEC1412] gi|298380454|ref|ZP_06990053.1| protease sohB [Escherichia coli FVEC1302] gi|300897325|ref|ZP_07115756.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|331662684|ref|ZP_08363607.1| putative protease SohB [Escherichia coli TA143] gi|218431892|emb|CAR12777.1| putative inner membrane peptidase [Escherichia coli UMN026] gi|291427021|gb|EFF00048.1| periplasmic protease [Escherichia coli FVEC1412] gi|298277896|gb|EFI19410.1| protease sohB [Escherichia coli FVEC1302] gi|300358904|gb|EFJ74774.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|331061106|gb|EGI33070.1| putative protease SohB [Escherichia coli TA143] Length = 349 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITSVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLNIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|257458110|ref|ZP_05623264.1| signal peptide peptidase SppA, 67K type [Treponema vincentii ATCC 35580] gi|257444404|gb|EEV19493.1| signal peptide peptidase SppA, 67K type [Treponema vincentii ATCC 35580] Length = 606 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 19/274 (6%) Query: 32 EDNSPHVARIAIRGQI----------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 ++ + I + G I DS L + ++ + DDS A+++ + S GG Sbjct: 320 KETDNQIGVIYLTGSITGTADNTADNADSPTLTDLFDQAADDDSIKAVVLRIDSGGGEVN 379 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A E I R++ ++ + KPV+ + +AAS Y I+ +++ + + ++ GSIGV P Sbjct: 380 ASEDIRRSVDRLSKKIGKPVVVSMGSIAASGAYWIASSADYVFCSPYTITGSIGVFAVSP 439 Query: 140 YVKPFLDKL-GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 ++ + + G+ + + ++ S F + + V +Y F+ V++ RN Sbjct: 440 TIQNAVKEYFGIHVDGISATGRM-PYSLFRNPTDEEKTQSELEVMHTYSVFLDKVAQGRN 498 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +P L+ G+I++G AK++ L D +GG + + +K Sbjct: 499 LPRATVEELAQGKIYSGTRAKELQLADELGGFTDAVNYAATKAGIKETYSLKVLYKEP-- 556 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + + + +LL + K +Q L ++ Sbjct: 557 ---PVADEILKTLLAENARFYKTADLQVLHELFG 587 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 19/196 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSP--GGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAA 108 ++ + + R + D TA+++ L S G S+ + A+ + K + KP+ Sbjct: 96 DITDALRRAAHDRRITAVLLDL-SGLYGISSGHFTELKTALLEYKDSNKPLYAFSTGYGL 154 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y I+ ++ I + V G + + K G+ +V + K+ + Sbjct: 155 -GRYYIASFADHIYLDQMGEVNLSGFYTESLFYGEMEKKFGIQWNAVHAGAFKSMAETYT 213 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL----------SDGRIWTGA 216 + ++ V + +++ ++ +R D + G + Sbjct: 214 RTGMSAGVHSNHLSVFTDLWQTYLQDIAANRASDADTLEAYAVHYNDALQKAKGD--SAQ 271 Query: 217 EAKKVGLIDVVGGQEE 232 A LI +G EE Sbjct: 272 AALDANLITDIGTYEE 287 >gi|114764456|ref|ZP_01443681.1| peptidase, family S49 [Pelagibaca bermudensis HTCC2601] gi|114543023|gb|EAU46042.1| peptidase, family S49 [Roseovarius sp. HTCC2601] Length = 265 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 9/233 (3%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P VA + ++G I Q L +ER R A+ + ++SPGGS Sbjct: 9 KKKPTVAVVRLQGAIGTGGRMALSDQSLRPLLERAFRKGKPVAVALEINSPGGSPVQSSL 68 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ PV ++AAS GY I+ A++ I A +S++GSIGV+ Sbjct: 69 IGARIRRLSQECEVPVFAFTEDVAASGGYWIASAADEIHADPSSILGSIGVISAGFGAHV 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + G+ + + K+ PF N + V + ++ + F+ + + R Sbjct: 129 FLQRQGIERRVHTAGRSKSMLDPFRPENEEDVARLNRLLGQLHETFIAQIKDRRGAKLAD 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 L G +W G A +VGL D +G V + + V + K P+ Sbjct: 189 NPDLFTGEVWIGKAACEVGLADGIGHLVPVMKDKFGDKVRFRRYEQKRRLLPR 241 >gi|126734017|ref|ZP_01749764.1| peptidase, family S49, putative [Roseobacter sp. CCS2] gi|126716883|gb|EBA13747.1| peptidase, family S49, putative [Roseobacter sp. CCS2] Length = 264 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 8/218 (3%) Query: 33 DNSPHVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + P VA I ++G I +S L IE+ A+ + ++ PGGS I Sbjct: 9 KSEPFVAVIRLQGAIANSGRGLDNPGLAPVIEKAFSKGKPAAVALEINCPGGSPVQSSLI 68 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ + K PV V ++AAS GY ++CA++ I S+ GSIGV+ Sbjct: 69 ASRIRRLADEKKIPVFAFVEDVAASGGYWLACAADEIFIDSCSITGSIGVISAGFGATEA 128 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +DK+GV + + K+ PF P V+ ++ ++ + F+ V R Sbjct: 129 IDKIGVERRVHTAGKSKSMMDPFKPEKPADVKKLKGWLEDLHATFIDYVKSRRGTKLSDN 188 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G ++ G + GL D +G V + + V Sbjct: 189 PDLFTGEVYIGQKGIDEGLADGIGHLAPVMKERFGDKV 226 >gi|23501300|ref|NP_697427.1| protease IV [Brucella suis 1330] gi|148560700|ref|YP_001258420.1| putative protease IV [Brucella ovis ATCC 25840] gi|161618370|ref|YP_001592257.1| peptidase S49 [Brucella canis ATCC 23365] gi|163842678|ref|YP_001627082.1| peptidase S49 [Brucella suis ATCC 23445] gi|256368852|ref|YP_003106358.1| protease IV, putative [Brucella microti CCM 4915] gi|23347188|gb|AAN29342.1| protease IV, putative [Brucella suis 1330] gi|148371957|gb|ABQ61936.1| putative protease IV [Brucella ovis ATCC 25840] gi|161335181|gb|ABX61486.1| peptidase S49 [Brucella canis ATCC 23365] gi|163673401|gb|ABY37512.1| peptidase S49 [Brucella suis ATCC 23445] gi|255999010|gb|ACU47409.1| protease IV, putative [Brucella microti CCM 4915] Length = 368 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 98 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 157 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 158 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 217 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 218 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 277 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 278 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 332 Query: 266 LSISS 270 + + S Sbjct: 333 IGMDS 337 >gi|19704208|ref|NP_603770.1| protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714432|gb|AAL95069.1| Protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 494 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 129/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E+++ + + L++ ++SP Sbjct: 216 AYKRKKNKSKNTIAIINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSP 275 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 276 GGSALESEKIYQKLKKL--DIPIYISMGDLCASGGYYIATVGKRLFANPVTLTGSIGVVI 333 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ S+++ ++ + + ++ Y F V E+ Sbjct: 334 LYPEFTETINKLKVNMEGFSKGKGFDIFDVSSKLSEESKEKIIYSMNEVYSEFKEHVMEA 393 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK+ GL+D +G + SL ++ K+ K Sbjct: 394 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGSLNDCINSLVK-DLELKDFKLTYIRGRK 452 Query: 257 NYWFCD--LKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + I ++K + L+ Sbjct: 453 SIMEVVSAMKPQFIKSDIIEKIKMLKSYSNKILYY 487 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 86/208 (41%), Gaps = 22/208 (10%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA----YAGEAIFRAIQKV 93 ++ ++I + + +++ +E + D +I+ + E + +K+ Sbjct: 2 ISTVSINKTL-SHEAVLKALENLVNDKKIEKIIIDVD----EVDLSRVHIEELKEIFEKL 56 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI----GVLFQYPYVKPFLDKLG 149 K +I + Y ++ +N I T S G ++ PY K L LG Sbjct: 57 SVNKEIIA-IGTTFDEYSYQVALLANKIYMLNTKQ--SCLYFRGYEYKEPYFKNILANLG 113 Query: 150 VSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +++ ++ K FS +++ + + + ++ ++ + F+ LV E R + T + Sbjct: 114 ITVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETLFQNFINLVKEKRKVDI--TNEI 171 Query: 208 SDGRIWTG--AEAKKVGLIDVVGGQEEV 233 G + +A ++GLID + EE+ Sbjct: 172 FSGDLIFANSEKAIQLGLIDGLSTYEEI 199 >gi|157157433|ref|YP_001462568.1| putative periplasmic protease [Escherichia coli E24377A] gi|300926654|ref|ZP_07142430.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|301327003|ref|ZP_07220292.1| putative signal peptide peptidase SppA [Escherichia coli MS 78-1] gi|157079463|gb|ABV19171.1| peptidase, S49 (protease IV) family [Escherichia coli E24377A] gi|300417320|gb|EFK00631.1| putative signal peptide peptidase SppA [Escherichia coli MS 182-1] gi|300846386|gb|EFK74146.1| putative signal peptide peptidase SppA [Escherichia coli MS 78-1] Length = 349 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + + + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGDNTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|256018482|ref|ZP_05432347.1| putative periplasmic protease [Shigella sp. D9] gi|332279537|ref|ZP_08391950.1| conserved hypothetical protein [Shigella sp. D9] gi|324117536|gb|EGC11442.1| peptidase S49 [Escherichia coli E1167] gi|332101889|gb|EGJ05235.1| conserved hypothetical protein [Shigella sp. D9] Length = 349 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + + ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFCEELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|269123729|ref|YP_003306306.1| signal peptide peptidase SppA, 36K type [Streptobacillus moniliformis DSM 12112] gi|268315055|gb|ACZ01429.1| signal peptide peptidase SppA, 36K type [Streptobacillus moniliformis DSM 12112] Length = 547 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 26/284 (9%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGS 79 + +S +A I + G+I + ++ E+ + +++ ++SPGGS Sbjct: 258 EINTSSNKIAVIYLDGEITEKSNSTVPYISYSNFEQKFEKAEKTKGIKGIVIRINSPGGS 317 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I+ I+ K+ PV + +AAS GY IS A N I +SL GSIGV+ P Sbjct: 318 AIEAKQIYNRIR--KSEVPVYISIGNIAASGGYYISSAGNKIFINPSSLTGSIGVVSIMP 375 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV-SESRN 198 L+KLG++I V+ SP+ ++ + + Q ++S Y F + ++ Sbjct: 376 KYSAALNKLGINIDGVEKGKYSNLLSPYKDLTDEERNIYQRKLESIYSEFKNDILKNNKK 435 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + ++ G+IW G+EA K+ L++ GG ++ +L + I + KNY Sbjct: 436 LTSESLEEVAQGKIWLGSEAIKLNLVNEFGGLQDTINALQEDLKLDNNYNIVNIYSEKNY 495 Query: 259 -------------WFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + KN+ + + LE+ I + K + ++ Sbjct: 496 EDVFSIFDRLLIKFKLKNKNILVINELEEKIQFIINQKGKAMYY 539 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 109/288 (37%), Gaps = 32/288 (11%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG 77 + ++ ++ ++ ++ G+ E+ + I+ DD + + L + Sbjct: 17 ILISDIFIPSDDKFTNSIKYI-----EGKNITFSEVYTSLNMIASDDKIQKIFIDLDTTA 71 Query: 78 GSAYAGEAIFRAIQKVK-NRKPVITE---VHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +A E + + K+K + K + ++ Y I+ ++ I+ + +I Sbjct: 72 FTASQLEELEPVLNKIKLSNKKIYAYGSEINNTN----YGIATYADEIIV-PETQNANI- 125 Query: 134 VLFQYPY----VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN--PKAVQMMQDVVDSSYH 187 VL Y K DK G ++ + K+ ++ + + + + ++D Sbjct: 126 VLTGYSNKSMYYKDLFDKYGFKMEVIHVGSHKSFGQNYTRNSISAEEKETLTRILDKRLE 185 Query: 188 WFVRLVSESRNIPYDK-TLVLSDGR--IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 F+ + +R I + L G + +A+ + L+D + +++ + + L D Sbjct: 186 QFIEKNANARKIKPEIFKEKLLKGEYAYISPEKARDLDLVDQIIFYDDLAKKI-DLKDDN 244 Query: 245 SI-------RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 +I +KIK+ N N + I+ T+P + + + Sbjct: 245 TISLQNYSEKKIKEINTSSNKIAVIYLDGEITEKSNSTVPYISYSNFE 292 >gi|118602719|ref|YP_903934.1| peptidase S49 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567658|gb|ABL02463.1| peptidase S49 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 315 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 20/259 (7%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDN------------SPHVARIAIRGQIE- 48 EFV + R + L V YF + S++ + SP VA + + G I+ Sbjct: 15 EFVRQNKSKRRWRIIFSLLFVGYFYFVSYIGVSGSGILETVLKKESPFVAEVVLSGTIQS 74 Query: 49 ----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITE 102 D+ E IE + ++A A+I+ ++SPGGS I++AI + K + K + Sbjct: 75 SGSIDADEAIELLHSAFESENAKAVILRINSPGGSPVQSSRIYKAIVRFKKQFDKKIYVV 134 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++ AS Y I A++ I A E+S++GSIGV+ + KLG+ + + K Sbjct: 135 IEDICASGCYYIVSAADEIYADESSIIGSIGVVMSSFGAVDAIKKLGIKRRLYTAGKYKG 194 Query: 163 EPSPFSEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 FS + K + +Q + D S+ F+ V R K L G IW G E+ K+ Sbjct: 195 LLDSFSPEDEKTLMHIQTSILDKSHQNFINAVKAGRGNKLSKHKDLFTGLIWLGQESNKL 254 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID + + + + + Sbjct: 255 GLIDGIADANYIAKHIIGI 273 >gi|317051685|ref|YP_004112801.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] gi|316946769|gb|ADU66245.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] Length = 326 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 19/281 (6%) Query: 32 EDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGG 78 + + I I+G I + QE++ ++ RD A+I+++ +PGG Sbjct: 43 GTHQDKILVIPIQGFISSTPREGMLTTKPSLVQEVVAHLDMARRDPLIRAVILTVDTPGG 102 Query: 79 SAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 + + ++ I++ + PV+ + MA S GY IS AS++I A ++ GS+G +F Sbjct: 103 TTVDSDILYHEIERFRLETGTPVVVSLMGMATSGGYYISLASDLITAHPATITGSVGTIF 162 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 P V ++KLG+ + +S +K SPF P +++Q +VD +F+ LV + Sbjct: 163 IRPKVHGLMEKLGLEAQVTRSGSLKDMGSPFRPELPAEQELIQQMVDDVNGFFLELVQQR 222 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + + ++ RI+T ++A +VGLID V V + ++ + Sbjct: 223 RRLSAEHMADVASARIYTASQALEVGLIDEVLHFPRVLTRAAEISGASPDARVVVYRRSA 282 Query: 257 ----NYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 N + + +L++ + G + +W P Sbjct: 283 YANDNVYNTMTNSAPGPALVDFGFVGHMASLKSGFYYLWAP 323 >gi|224135361|ref|XP_002322054.1| predicted protein [Populus trichocarpa] gi|222869050|gb|EEF06181.1| predicted protein [Populus trichocarpa] Length = 691 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I ++LIE+I + A I+ + Sbjct: 380 WTLGLTGGRDLIAIIRASGSISRVKSPLSLSGSGIIGEQLIEKIRQARESKKYKAAIIRI 439 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A++ IVA +L GSIG Sbjct: 440 DSPGGDALASDLMWREIRLLAESKPVIASMSDVAASGGYYMAMAADTIVAENLTLTGSIG 499 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + + + + + P ++ ++Y F Sbjct: 500 VVTGKFSLGKLYEKIGFNKEIISRGKYAELLAADQRPLRPDEAELFAKSAQNAYEQFRDK 559 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + SR++P DK ++ GR+WTG +A GL+D +GG R++ Sbjct: 560 AAFSRSMPVDKMEEVAQGRVWTGQDAASRGLVDAIGGFSRAVAIAKQKANIPQDRQV 616 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 23/254 (9%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------- 50 EF ++I L + + + + V + +RGQI D Sbjct: 110 EFDFQEIGAWNRFLVKLKMLIAF----PWERVRKGSVLTMKLRGQISDQLKSRFSSGLSL 165 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRKPVITEVHEMA 107 ++ E + + D + + + + G E + R I K + Sbjct: 166 PQICENFIKAAYDPRISGIYLHID---GLNCGWAKVEELRRHIFNFKKSGKFVVAYLPAC 222 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ A + + T+ G Q ++ + +G+ + K+ Sbjct: 223 REKEYYLASACDDLYLPPTAYFSFYGFTVQAAFLAGVFENVGIQPDVQRIGKYKSAGDQL 282 Query: 168 S--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ + +M+ ++D+ Y ++ VS ++ + + ++ K+ GLI Sbjct: 283 TRKSMSKENCEMLTAILDNIYGNWLDKVSSTKGKKIEDMKNFINEGVYKVERLKEEGLIT 342 Query: 226 VVGGQEEVWQSLYA 239 + +EV L Sbjct: 343 NMHYDDEVISMLKE 356 >gi|262200199|ref|YP_003271407.1| peptidase S49 [Gordonia bronchialis DSM 43247] gi|262083546|gb|ACY19514.1| peptidase S49 [Gordonia bronchialis DSM 43247] Length = 297 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 15/271 (5%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 + HVA + + G I S + ++R + A++V ++SPGGS Sbjct: 14 ARSRADHVAVVRLDGPIGASPVGRPGLTTDAVEPILKRAFETERLKAVVVVVNSPGGSPA 73 Query: 82 AGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 E I I+++ + K PV+ ++AAS GY I+CA++ I AA TS+VGSIGV+ Sbjct: 74 QSEYIAERIRQLASEKGVPVLAFCEDVAASGGYWIACAADEIFAAHTSIVGSIGVVSSGF 133 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L + GV + S KA FS P+ V+ ++ + + F+ V + R Sbjct: 134 GLADVLSRFGVERRLYTSGDNKARLDTFSPAVPEDVEWLKGLQHQLHEAFITWVRQRRGR 193 Query: 200 PYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + L G +W G+ A +VGL+D +G V Y D I ++ P Sbjct: 194 KLNAPDDQLFSGDVWVGSNAAEVGLVDGIGVMRSVIAERY---PDAEITVVQAPKPLLAR 250 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + + + + + + ++ G+ + Sbjct: 251 VVGAQMSTAGAGVAGGWLTAVAESLTTGILS 281 >gi|304411918|ref|ZP_07393529.1| Peptidase S49 domain protein [Shewanella baltica OS183] gi|307303314|ref|ZP_07583069.1| Peptidase S49 domain protein [Shewanella baltica BA175] gi|304349778|gb|EFM14185.1| Peptidase S49 domain protein [Shewanella baltica OS183] gi|306913674|gb|EFN44096.1| Peptidase S49 domain protein [Shewanella baltica BA175] Length = 338 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + ++ V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 88 DTSTGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGYGLA 145 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L Sbjct: 146 SSQLDRLRQAEIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLL 205 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + + Q Q+ ++ ++ F V + R P + Sbjct: 206 KKHEIDYEQHTAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLV 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++GL+D + ++V SL A +R Sbjct: 264 KVATGEHWYGQQAIELGLVDAISTSDDVIMSLAAERTVYKMR 305 >gi|328544962|ref|YP_004305071.1| peptidase, S49 (Protease IV) family [polymorphum gilvum SL003B-26A1] gi|326414704|gb|ADZ71767.1| Peptidase, S49 (Protease IV) family [Polymorphum gilvum SL003B-26A1] Length = 285 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 14/267 (5%) Query: 38 VARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + ++G I + +ER A A+ + ++SPGGS IFR Sbjct: 20 VPVVRLQGPIGLVTPLRPGLSLASVALPLERAFSVRKAPAVALIINSPGGSPVQSRLIFR 79 Query: 89 AIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ + K++K V+ + ++AAS GY+++ A + IVA S+VGSIGV+ +D Sbjct: 80 RIRDLAEKHKKDVLVFIEDVAASGGYMLALAGDEIVADPASIVGSIGVVSAGFGFTGLID 139 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+GV + + KA PF NP+ V ++ + + F+ +V E R Sbjct: 140 KIGVERRVYTAGEKKAILDPFRPENPEDVAHLKALQHEIHEIFIDMVRERRGDILADNPD 199 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI-KDWNPPKNYWFCDLKN 265 L G+ WTG A+ +GL+D +G V + Y V+ + + + + Sbjct: 200 LFSGQFWTGRTARDLGLVDSLGDLSAVLRRRYGEAVEPRLISLPRGLFGRRTGVGVGAAA 259 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 + + L D L+ + + LWA + Sbjct: 260 QPLPAGLGD--DLLSAVEARALWARFG 284 >gi|255021332|ref|ZP_05293380.1| Protease IV [Acidithiobacillus caldus ATCC 51756] gi|254969195|gb|EET26709.1| Protease IV [Acidithiobacillus caldus ATCC 51756] Length = 611 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 18/268 (6%) Query: 37 HVARIAIRGQ----------IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +A + I G + ++ + +++ + +D + A+++ +SSPGG EAI Sbjct: 318 QIAVVPIDGMLVPGDVEKAGVVATEPTVAQLDALRKDKAVKAVVLQVSSPGGDVTTAEAI 377 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +AI +++ KPV+ + + AS Y +S ++ I A T++ IGV +P L Sbjct: 378 RKAILRLRKAGKPVVVSMGSLGASGAYWLSTGADEIFAEPTTITADIGVFMLFPDYSGTL 437 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 KLG+++ V A PSP + + Q VVD YH FV LV+ +R++P+ + Sbjct: 438 HKLGITVSGVSMPAGGAHPSPMMPLTDSEQKAYQAVVDYLYHHFVSLVATARHLPFAQAE 497 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKNYWFCDL 263 + GR W+G A +GL++ +GG +E L + + P K L Sbjct: 498 KDAQGRAWSGIAAYHMGLVNQLGGLQEAIAEAAKLAKLEPHHYDVRYLPIPEKISVQNLL 557 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVW 291 NL++ L + + L A+W Sbjct: 558 GNLALGILPQGMLDLGLGGS-----ALW 580 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 85/205 (41%), Gaps = 23/205 (11%) Query: 52 ELIERIERISRDDSATALIVSLS-S--PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L+ I+ ++D ++ L+ S GGS + + +A+Q + KP+ + Sbjct: 89 RLVRAIDAAAKDPHIR--LLELNLSDFGGGSITQLQTVAKALQTFRASGKPIYAFAPNYS 146 Query: 108 -ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS Y ++ +N I +V G + Y K F DK+GV + S + K+ P Sbjct: 147 QAS--YFLAAQANQIFLPHLGVVLFTGFTTKGLYFKDFFDKIGVRVYSFRQGKYKSAMEP 204 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----------GRIWT 214 ++++ A + ++ + +H + +++ R+IP + + G Sbjct: 205 LIRNDMSAAAREENEEWLRVWWHSYAEGIAQGRHIPVTQVDRYATQLPELIQTSKGN--A 262 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA 239 A GLI +G +++ ++ Sbjct: 263 AQLALSEGLITRLGDKQDFEAAMAK 287 >gi|310767745|gb|ADP12695.1| putative periplasmic protease [Erwinia sp. Ejp617] Length = 349 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 101/210 (48%), Gaps = 10/210 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEA 85 V P + I +G + + + + ++ + +++ L SPGG + Sbjct: 96 VSKGKPTLYVIDFKGSMGAGE--VSSLREEVSAVMAVAEKGDEVLLRLESPGGVVHGYGL 153 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q+++++ P+ V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 154 AASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPNFNRL 213 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 214 LKRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREDLNETHQLFKQFVHQMR--PTLDI 271 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A + GL+D +G +++ Sbjct: 272 DSVATGEHWYGQQALEKGLVDAIGTSDDLI 301 >gi|110805274|ref|YP_688794.1| putative periplasmic protease [Shigella flexneri 5 str. 8401] gi|110614822|gb|ABF03489.1| putative protease [Shigella flexneri 5 str. 8401] Length = 296 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 39 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 96 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 97 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 156 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 157 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 214 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 215 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 253 >gi|330945618|gb|EGH47112.1| peptidase S49, SppA [Pseudomonas syringae pv. pisi str. 1704B] Length = 262 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 13/216 (6%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIER 59 K + ++ ++++ V + S H A I ++G I D ++ ++ +++ Sbjct: 50 FKLLTFAFLFVAVI---VPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQK 106 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 107 AFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIAS 166 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I A + SLVGSIGV +DKLGV ++ S KA PF Q Sbjct: 167 AADQIYADKASLVGSIGVTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQ 226 Query: 177 MMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDG 210 Q V+D+++ F+ V + R + + L G Sbjct: 227 FWQGVLDTTHRQFIASVKQGRGDRLKDKEHPELFSG 262 >gi|56698460|ref|YP_168834.1| S49 family peptidase [Ruegeria pomeroyi DSS-3] gi|56680197|gb|AAV96863.1| peptidase, family S49 [Ruegeria pomeroyi DSS-3] Length = 281 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 14/258 (5%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------DSQELIERIERISRD 63 R + + T + + + P VA + + G I + L +ER R Sbjct: 3 RVLFVGRARSTSAAMTLALPFKKKPPLVAVVRLSGAIGLAGRGALNDTTLAPMLERAFRK 62 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNII 121 A+ + ++SPGGS I I+++ PV V ++AAS GY ++CA++ I Sbjct: 63 GKPAAVALEINSPGGSPVQSSLIGARIRRLAAEHKVPVYAFVEDVAASGGYWLACAADEI 122 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++S++GSIGV+ FL + G + + K+ PFS + V ++ + Sbjct: 123 WADDSSVLGSIGVISASFGAHVFLARQGFERRVHTAGKSKSMLDPFSPEKKEDVTRLKGL 182 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + + F+ V E R D T L G +W GA A+ +GLID + + Q + Sbjct: 183 LGDIHQNFISHVKERRGDRLDATEDLFTGEVWLGARARDLGLIDGIAHLKPKMQERFGDK 242 Query: 242 VDQSIRKIKDWNPPKNYW 259 V + + + + +W Sbjct: 243 V-----RFRRYGVRRPFW 255 >gi|153001229|ref|YP_001366910.1| putative periplasmic protease [Shewanella baltica OS185] gi|151365847|gb|ABS08847.1| Peptidase S49 domain protein [Shewanella baltica OS185] Length = 338 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 10/220 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 90 STGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGYGLASS 147 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K Sbjct: 148 QLDRLRQADIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKK 207 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + K + F E + + Q Q+ ++ ++ F V + R P + + Sbjct: 208 HEIDYEQHTAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLVKV 265 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + G W G +A ++GL+D + ++V SL A +R Sbjct: 266 ATGEHWYGQQAIELGLVDAISTSDDVIMSLAAERTVYKMR 305 >gi|38638590|ref|NP_943176.1| peptidase [Pseudomonas sp. ND6] gi|34335378|gb|AAP44276.1| probable peptidase [Pseudomonas sp. ND6] Length = 258 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 14/248 (5%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 VAR+ G+ ++ L + + ++ A+I+ ++SPGGS ++ +++++ Sbjct: 12 VARLG-DGEEASAENLKRSLGKAFESENTKAVILEINSPGGSPVQAGHVYDEVRRLRALH 70 Query: 98 P---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P V + ++ AS GY I+ A++ I A + SLVGSIGV + KLGV +S Sbjct: 71 PDTKVYAVITDLGASGGYYIASAADEIFADKASLVGSIGVTAASFGYVELMQKLGVERRS 130 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRI 212 S KA F N + + + V+ ++++ F+R V R + + L G I Sbjct: 131 YTSGEHKAFLDQFQPQNQEETKFWEGVLKTTHNQFIRSVEAGRGERLKAKENPDLYSGLI 190 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISS 270 WTG +A +GL+D +G + V + + + KI D+ +N F S++ Sbjct: 191 WTGEQAVGLGLVDRLGDSDYVAREVVG------VSKIVDFTRKQNPLDRFASKIGASVAE 244 Query: 271 LLEDTIPL 278 L + Sbjct: 245 HLSLRLGF 252 >gi|160875901|ref|YP_001555217.1| putative periplasmic protease [Shewanella baltica OS195] gi|160861423|gb|ABX49957.1| Peptidase S49 domain protein [Shewanella baltica OS195] gi|315268092|gb|ADT94945.1| Peptidase S49 domain protein [Shewanella baltica OS678] Length = 338 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 10/220 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 90 STGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGYGLASS 147 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K Sbjct: 148 QLDRLRQADIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLLKK 207 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + K + F E + + Q Q+ ++ ++ F V + R P + + Sbjct: 208 HEIDYEQHTAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLVKV 265 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + G W G +A ++GL+D + ++V SL A +R Sbjct: 266 ATGEHWYGQQAIELGLVDAISTSDDVIMSLAAERTVYKMR 305 >gi|315230248|ref|YP_004070684.1| protease IV [Thermococcus barophilus MP] gi|315183276|gb|ADT83461.1| protease IV [Thermococcus barophilus MP] Length = 338 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 124/234 (52%), Gaps = 3/234 (1%) Query: 37 HVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 +A + I G I++ + +++ +I +I ++S +++ + SPGG I++ ++K+ Sbjct: 95 TIAILPIMGPIDENMALDVVSKIRQIKENESIGGVLLWIESPGGYVGPVRVIYKELKKLS 154 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV+ A S GY I+CA++ I+A + VGSIGVL+ + ++ + + G+ + Sbjct: 155 YSKPVVAYTGGYADSGGYFIACAADKIIADPLAEVGSIGVLYVHYDLEQYYAQNGIKVNV 214 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ K + + ++ P+ +M+++++D+ + F+++VSE R++ + T + G+ W Sbjct: 215 FKTGKYKDMGAEWRDLTPEEREMIKNIIDTYFQDFLQVVSEGRHLDMNTTKKYATGQTWF 274 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 + K + L+D G + + L L +S + + ++ + +L + Sbjct: 275 ATDVKGI-LVDDTGDLDYAIKVLEQLMNVKSAKVVLYSAQKTDFGIYESSSLYM 327 >gi|126174900|ref|YP_001051049.1| putative periplasmic protease [Shewanella baltica OS155] gi|125998105|gb|ABN62180.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella baltica OS155] Length = 338 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + ++ V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 88 DTSTGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGYGLA 145 Query: 87 FRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L Sbjct: 146 SSQLDRLRQAEIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLL 205 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + + Q Q+ ++ ++ F V + R P + Sbjct: 206 KKHEIDYEQHTAGNFKRTLTVFGENSDEGRQKFQEELEETHILFKAFVGKYR--PELDLV 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++GL+D + ++V SL A +R Sbjct: 264 KVATGEHWYGQQAIELGLVDAISTSDDVIMSLAAERTVYKMR 305 >gi|85707607|ref|ZP_01038673.1| periplasmic serine protease [Erythrobacter sp. NAP1] gi|85689141|gb|EAQ29144.1| periplasmic serine protease [Erythrobacter sp. NAP1] Length = 629 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 10/224 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQELIER---------IERISRDDSATALIVSLSSPGGSAYA 82 D+S +A + + G I D + D L+V ++SPGGS A Sbjct: 308 GDSSGEIAVVTVAGTIVDGDAGPGAAGGARIAGLLNDALATDDIKGLVVRVNSPGGSVLA 367 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I RA+Q+ +++ PV +AAS GY ++ +S+ I A ++ GSIGV P Sbjct: 368 SEEIRRAVQRFRDKDIPVAVSFANVAASGGYWVATSSDRIFAQPETITGSIGVFAVIPTF 427 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + ++GV+ + +++P+ +P + ++P+ ++Q V +Y F+ V+E+R + Sbjct: 428 EDAAAEIGVNAEGFRTTPLSGQPDLIAGLSPEVDAILQAGVSDTYSDFLTRVAEARGLTV 487 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 ++ ++ GR+W G A+++GL+D GG ++ + + Sbjct: 488 EQVDTMAQGRVWDGGTARQLGLVDQFGGLQDAINWVAEKAELEE 531 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 19/235 (8%) Query: 50 SQELIERIERISRDDSATALIVSLSS--PGGSAY--AGEAIFRAIQKVKNRKPVITEVHE 105 +++L+ ++ + DD A+++ +S+ GG + A ++ K KPV+T Sbjct: 81 ARDLVRALDAAAGDDRIKAVVMDMSAFVGGGQVHMQAIGEAMDRVR--KADKPVLTYAVA 138 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 ++ ++ + A G Y LDKL ++ + + K+ Sbjct: 139 YGDD-HMHLAAHASEVWADPLGGAIIAGPGGANLYYAELLDKLNINTRVYRVGEFKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-------TGA 216 P+ + + A + + + + + + V ++R D V+ D W Sbjct: 198 PYILNGPSDAARENREALYGALWEEWQANVKKARP-SLDLDRVIGDPVAWVEASSGDLAE 256 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPK-NYWFCDLKNLSIS 269 A + GL+D +G E + + G D S +K + + D+ N S Sbjct: 257 AALEAGLVDNLGDSVEFGTRVAEIVGEDTSTKKPGTYAKSDLRPFLADIGNGDSS 311 >gi|241763832|ref|ZP_04761877.1| peptidase S49 [Acidovorax delafieldii 2AN] gi|241366876|gb|EER61290.1| peptidase S49 [Acidovorax delafieldii 2AN] Length = 353 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 11/285 (3%) Query: 7 KIKTR--YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIER 59 +I R +++++L+ + +S ++PH A + I+G+I E ++ + Sbjct: 69 RIFFRLTWLLVALLVAWAALYQSTSGTSKSAPHTAVVDIKGEIASGAEASAELVVAAMRS 128 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCA 117 D+ + AL++ ++SPGGS I I ++K + KPV V E ASA Y I+ A Sbjct: 129 ALEDEGSQALVLLINSPGGSPVQAGIINDEIVRLKAKYNKPVYAVVEETCASAAYYIAAA 188 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 ++ I + S+VGSIGVL ++KLGV + + + K PFS K Sbjct: 189 ADEIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPQTEKQRAY 248 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++D + F+ +V R T G WTG +A ++GL D +G + V + + Sbjct: 249 ALTMLDQIHQQFIGVVKAGRGDRLKPTPETFSGLFWTGQQAIEMGLADKLGSLDYVAREV 308 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL--EDTIPLMK 280 + ++ F L + +PL++ Sbjct: 309 VKAEDIIDYTRRENVAERLVKRFGAAMGAGALKALSASNAVPLLR 353 >gi|281209653|gb|EFA83821.1| hypothetical protein PPL_02889 [Polysphondylium pallidum PN500] Length = 848 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 22/259 (8%) Query: 32 EDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPG 77 +A I G I ++ L I D + A+I+ + SPG Sbjct: 514 NSKKNRIAYINAEGAISCGKSLTKMNGGPTIGAESLSLAIRAAVLDKTIKAIIIRVDSPG 573 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A + I++ K K VI + +AAS GY ISC ++ IVA ++ GSIGVL Sbjct: 574 GSYQASCIVHFEIERAKKAGKKVIALMGSVAASGGYFISCNADKIVAQHGTITGSIGVLL 633 Query: 137 QYPYVKPFLDKLGVSIKSVK-------SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 ++ L+K+GVS ++K S + + + +D Y F Sbjct: 634 GKLNIRKPLEKIGVSFDNLKINERDDTVGDNSNLFSSLYNYSEAQLNTLNHELDEIYGDF 693 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V++ RN+ ++ ++ GR+W+G +A + L+D +GG E + L K+ Sbjct: 694 KSKVAQGRNLSMEQVEEVARGRVWSGQQAFERKLVDRIGGLNEAIEETKELLKLGKDDKV 753 Query: 250 KDWNPPKNYWFCDLKNLSI 268 + P++ L + S Sbjct: 754 ELIPFPRDNLIKQLLSSSA 772 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 101/240 (42%), Gaps = 24/240 (10%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG-----SAYAGEAIFRAIQKVKNR-KPVITEVH 104 +++++ I + + D T LI + G S + I A++ ++++ K + Sbjct: 278 RDIVDGIRKAADDPKVTGLIFRI----GTHFAMSFAHIQEIRDAVRYMRSKGKKTLFYAD 333 Query: 105 EMA-ASAG---YLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKS 157 S Y ++ A I + VGS+ ++ P++K L+KL + + ++ Sbjct: 334 SFGEFSNANITYYLASAFETIYMSP---VGSLCIVNWGIDAPFIKKTLEKLEIVPEFLRR 390 Query: 158 SPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ + F+E + P + MQ ++DS ++ +++ RN+ D +T Sbjct: 391 REFKSAANMFTEEKMTPSERESMQSILDSLFNQMTEGIAQDRNLLVDDVSRYFASGPFTA 450 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL--GVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 A+A+ + LID + + + + + + + K PK K LS++ L Sbjct: 451 AKAESLKLIDKLAYLPDAYDEIKGVQPAAAAAEKTAKQRKSPKVNTIFLTKYLSLTGRLN 510 >gi|308187005|ref|YP_003931136.1| protease [Pantoea vagans C9-1] gi|308057515|gb|ADO09687.1| putative protease [Pantoea vagans C9-1] Length = 348 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 8/211 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSAT----ALIVSLSSPGGSAYAGE 84 + P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 93 GQTKSVKPTLYVLDFKGS-MDAGEVSSLREEISAVLAVKQPGDEVLLRLESPGGVVHGYG 151 Query: 85 AIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q+++ + V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 152 LAASQLQRLRDADLRITAAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPNFNR 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L + + ++ + K + F E + + Q+ +D ++ F + V + R P Sbjct: 212 LLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQEDLDETHLLFKQFVHQMR--PTLD 269 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A +GLID +G +++ Sbjct: 270 IDRVATGEHWYGRQALDLGLIDEIGTSDDLI 300 >gi|82544274|ref|YP_408221.1| periplasmic protease [Shigella boydii Sb227] gi|187730620|ref|YP_001880101.1| putative periplasmic protease [Shigella boydii CDC 3083-94] gi|81245685|gb|ABB66393.1| putative protease [Shigella boydii Sb227] gi|187427612|gb|ACD06886.1| peptidase, S49 (protease IV) family [Shigella boydii CDC 3083-94] gi|320187510|gb|EFW62196.1| putative protease sohB [Shigella flexneri CDC 796-83] gi|332094825|gb|EGI99869.1| peptidase family S49 family protein [Shigella boydii 3594-74] Length = 349 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKYIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|161831390|ref|YP_001595988.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 331] gi|161763257|gb|ABX78899.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 331] Length = 313 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 21/295 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHV----EDNSPHVARIAIRGQIEDSQ-----ELIER 56 + ++ M L+ ++ F+ SS + +V+ + + G I + ++ Sbjct: 25 RNVRFAGWMFILLLFAILIFAPSSSELEARRSDGAYVSLVRMNGTIMSNTTFSALRVVPE 84 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLI 114 + + D ++ +++ ++SPGGS I I ++K + K V+ + AS YL+ Sbjct: 85 LRKAFADKNSKGVVLLINSPGGSPVQASIIRDKIIELKKQYHKKVVVVGEDELASGAYLV 144 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S ++ I +L GSIGV+ L K+GV+ + + K PF V P+ Sbjct: 145 STGADKIYVNNDTLTGSIGVIMGGFGFVDTLKKVGVTRRLFVAGDHKDRLDPFQPVKPED 204 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+ + V+ + F+ V + R + G WTG EA ++G++D V Sbjct: 205 VEKINKVLAQVHQNFIDQVIQGRGNRLHGDRQEIFSGDFWTGKEAAQLGVVDGTANLWTV 264 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS---SLLEDTIPLMKQTKVQ 285 + + ++ KD+ ++ N + L +T PL +Q +V Sbjct: 265 LEREFG------VKDYKDYTTRVSFLQALFHNTATELYFHLTNETSPLREQMQVD 313 >gi|296102097|ref|YP_003612243.1| putative periplasmic protease [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056556|gb|ADF61294.1| putative periplasmic protease [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 348 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 12/215 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 E + P V + +G ++ + E+ + D ++V L SPGG + Sbjct: 96 ETSIPRVYVLDFKGSMDAHEVSSLREEVTAVLAVAKPQDQ---VVVRLESPGGVVHGYGL 152 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q+++ ++ P+ V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P F Sbjct: 153 AASQLQRLREKQIPLTVAVDKVAASGGYMMACVADKIVAAPFSIIGSIGVVAQIPNFNRF 212 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 213 LKSKEIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVHRMR--PALDI 270 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D VG +++ +L Sbjct: 271 DQVATGEHWYGTQALEKGLVDEVGTSDDLLLNLME 305 >gi|188586361|ref|YP_001917906.1| Acid phosphatase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351048|gb|ACB85318.1| Acid phosphatase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 566 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 3/241 (1%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 + LV + + S N P + I G+ + E++ ++ + +IV + Sbjct: 288 VGLVKIEGMIIDGRSKAPQNYPPIPIPLIAGERAGDLTITEQLRKLGANPKIKGIIVFID 347 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA A E+I I+ + +KPVI + E AAS GY ++ ++ IV+ T+L GSIGV Sbjct: 348 SGGGSALASESIAYTIRSITRQKPVIALLGEKAASGGYYVASQADYIVSYPTTLTGSIGV 407 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L+KL ++ + + N + + MQ+ + +Y+ F+ V Sbjct: 408 VAGKAVNTNLLNKLLINREINVRGNSREMFYSHRVFNDREREKMQEGLMRTYNLFLERVC 467 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R + + ++ G++WTG +A GL+D +GG EE + L + K + P Sbjct: 468 EGRKMTKAQLDPIAKGKVWTGEQALAKGLVDELGGFEETKVKMKELT---GLSKFSIYEP 524 Query: 255 P 255 Sbjct: 525 K 525 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 10/202 (4%) Query: 52 ELIERIERISRDDSATALIV---SLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L ++++ IS D T +++ + + P + + A++ +KN K + + + Sbjct: 62 NLKKQLKTISNDPRLTGVVLKQTNFNIP---YTYLDEVIDALKILKNNNKKLYSWAKNYS 118 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S Y ++ + I + +G L + ++K L++LG+ K SP K Sbjct: 119 TSG-YFLASYCDEIFLQPGGKIDELGFLNESFFLKDALNQLGIEFDIFKISPYKTASDFL 177 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 S + +A +M Q +++S Y F+ +S R + L + +T E+ ++GLID Sbjct: 178 IRSNSSKEAREMNQWIMNSIYDNFINNISWGRKKTKQEMEELVNNAPYTDNESLELGLID 237 Query: 226 VVGGQEEVWQSLYALGVDQSIR 247 + G+E++ + L L +S + Sbjct: 238 KILGEEDLVKFLKPLDKKESKK 259 >gi|240103706|ref|YP_002960015.1| Signal peptide peptidase SppA (sppA) [Thermococcus gammatolerans EJ3] gi|239911260|gb|ACS34151.1| Signal peptide peptidase SppA (sppA) [Thermococcus gammatolerans EJ3] Length = 329 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 7/244 (2%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + +A + I G IE L + +E++ +DDS +++ + SPGG A I Sbjct: 78 GGTNVTNATIALVPIFGVIEGQTALNTVTTLEKLMKDDSVGGVLLWIESPGGDVGAVREI 137 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + +Q ++ +KPV+ +AAS GY I+ + I+A + VGSIGV++ + + Sbjct: 138 YHEVQVLRAKKPVVAYTGGIAASGGYYIAVGAERIIADPLAEVGSIGVIYVHFNLADNYA 197 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 G+ + K+ P K + + + + + ++D+ + F++ VS RN+ ++T Sbjct: 198 SNGIKVDVFKTGPHKDMGAEWRALTEYERKKIWGMIDAYFQSFLQAVSMGRNMTLNETRE 257 Query: 207 LSDGRIWTGAEAKKVG--LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G W A KV L+D G + + L L +S +P ++Y Sbjct: 258 YATGETWL---AIKVNGTLVDETGNFQTAVEELEKLMGVESAEIKVYGSPTQSYSLGVFG 314 Query: 265 NLSI 268 ++ Sbjct: 315 EGAL 318 >gi|127513335|ref|YP_001094532.1| putative periplasmic protease [Shewanella loihica PV-4] gi|126638630|gb|ABO24273.1| Peptidase S49, N-terminal domain protein [Shewanella loihica PV-4] Length = 343 Score = 218 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 13/228 (5%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 +P V I +G I+ + E I I I+ ++V++ S GG + Sbjct: 95 TPRVFVIDFKGSIDAHEVASLREEISAILAIAEPGD--EVVVNVESGGGMVHGYGLAASQ 152 Query: 90 IQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K Sbjct: 153 LDRLRSAEIPLTICVDKVAASGGYMMACVANTIYAAPFAIVGSIGVVAQIPNFNRLLKKH 212 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + K + F E + Q Q+ ++ ++ F +S+ R P ++ Sbjct: 213 DIDYEQHTAGDFKRTLTLFGENTDEGRQKFQEELEETHVLFKAFISKYR--PTLDIAKVA 270 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G W G +A +GL+D + ++V L ++++ K++ K Sbjct: 271 TGEHWYGQQALDLGLVDGLSTSDDVVMKLAE---EKTVIKVRYQLKKK 315 >gi|220924243|ref|YP_002499545.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219948850|gb|ACL59242.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 287 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 11/263 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGS 79 + + + P V + + G I L +ER A+ + ++SPGGS Sbjct: 15 ASLRRDRPVVPVVRLSGPIGAVSPLRQGLSLGACAPALERAFGLPDIKAVAIVVNSPGGS 74 Query: 80 AYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 A I R I+ + + PV+ V ++AAS GY+I+CA++ I+A +SLVGSIGV+ Sbjct: 75 AAQSHLIHRRIRVLAAEAKVPVLAFVEDVAASGGYMIACAADEIIADPSSLVGSIGVVSA 134 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + L++LGV + + P KA PF +P V ++ + F LV R Sbjct: 135 GFGFQGLLERLGVERRVHTTGPSKAMLDPFRPEDPADVARLKGIQADIQAMFTELVRSRR 194 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L G +W+G + +GL+D +G V + Y V + + Sbjct: 195 PRLSGDPDELFSGAVWSGRQGLALGLVDALGDVRTVLRERYGETVQIRLVEQVRGGLLGR 254 Query: 258 YWFCDLKNLSISSLLEDTIPLMK 280 + E + L++ Sbjct: 255 LLRRREPGTEALAAFEGALALLE 277 >gi|114705272|ref|ZP_01438180.1| Clp protease:Peptidase U7:Na+/H+ antiporter NhaA [Fulvimarina pelagi HTCC2506] gi|114540057|gb|EAU43177.1| Clp protease:Peptidase U7:Na+/H+ antiporter NhaA [Fulvimarina pelagi HTCC2506] Length = 298 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 18/249 (7%) Query: 38 VARIAIRGQIEDSQELIER-----------IERISRDDSATALIVSLSSPGGSAYAGEAI 86 + + + G I + IER +E+ + A+ V ++SPGGS I Sbjct: 21 IPTVRLSGAIMATGGGIERQVLSMAGVAPMLEKAFSQKGSPAVAVIVNSPGGSPVQSRLI 80 Query: 87 FRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ I+ + K V+ V ++AAS GY+I+CA + I+A +S+VGSIGV+ Sbjct: 81 YKRIRDLAEDKKKRVLVFVEDVAASGGYMIACAGDEIIADPSSIVGSIGVVSGSFGFVEA 140 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + KLG+ + + K PF P+ V+ ++ + + F+ LV SR + Sbjct: 141 ISKLGIERRVHTAGKNKVTLDPFQPEKPEDVERLKALQLDVHDTFIDLVKASRKNKLAEN 200 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G W+G +A +GLID +G V + LY + + + P + Sbjct: 201 DDLFTGLFWSGRQALDLGLIDRLGDLHSVVRELYGEKAEPKL-----YTPKTGFLGRTKP 255 Query: 265 NLSISSLLE 273 + + +E Sbjct: 256 GVGVGVGIE 264 >gi|217972851|ref|YP_002357602.1| putative periplasmic protease [Shewanella baltica OS223] gi|217497986|gb|ACK46179.1| Peptidase S49 domain protein [Shewanella baltica OS223] Length = 330 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + ++ V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 80 DTSTGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGYGLA 137 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L Sbjct: 138 SSQLDRLRQADIPLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFNRLL 197 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + + Q Q+ ++ ++ F V + R P + Sbjct: 198 KKHEIDYEQHTAGNFKRTLTVFGENSDEGRQKFQEELEETHVLFKAFVGKYR--PELDLV 255 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++GL+D + ++V SL A +R Sbjct: 256 KVATGEHWYGQQAIELGLVDAISTSDDVIMSLAAERTVYKMR 297 >gi|313127075|ref|YP_004037345.1| signal peptide peptidase a [Halogeometricum borinquense DSM 11551] gi|312293440|gb|ADQ67900.1| signal peptide peptidase A [Halogeometricum borinquense DSM 11551] Length = 330 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 19/235 (8%) Query: 38 VARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VA IA+ G I S +++E+I+ + D + L+V L++PGG+ Sbjct: 65 VAEIAVEGPISRDGGSGRLPTRPGGASSDDVVEQIQTAADDGAVDGLLVRLNTPGGAVLP 124 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I RA+ + P I + AS GY I+ + I A + S+VGSIGV+ V Sbjct: 125 SDDIRRAVAEF--DGPTIAYATDTCASGGYWIASGCDEIWAHDVSIVGSIGVIGSSVNVH 182 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 D+LGVS + + K + E + + +Q +VD Y FV V+E R + D Sbjct: 183 ELADRLGVSYERFAAGKYKDAGTALKEPSADEREYLQGLVDDYYDDFVERVAEGREMDPD 242 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ R++ G+ A ++GL+D +G +++V L A +D ++++ P +N Sbjct: 243 AIRD-TEARVYLGSRAHELGLVDELGTRDDVLDRLAAR-LDVESVSVREFTPSEN 295 >gi|320176687|gb|EFW51725.1| putative protease sohB [Shigella dysenteriae CDC 74-1112] Length = 344 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 87 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 144 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 145 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 204 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 205 FNRFLKSKYIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 262 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 263 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 301 >gi|320538294|ref|ZP_08038179.1| signal peptide peptidase SppA [Treponema phagedenis F0421] gi|320144870|gb|EFW36601.1| signal peptide peptidase SppA [Treponema phagedenis F0421] Length = 603 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 130/294 (44%), Gaps = 20/294 (6%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIED----------SQELIERIERISRDDSATA 68 +++ +++ +++ + I ++G I S +++ + D A Sbjct: 300 FISLDDYNFYYSHSESTNKIGIIYLKGAISSYGTRQNDAVTSGYMLDLFDLAVNDPDVKA 359 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ + S GG +A E I RA+++ V+ +KPV+ + +AAS Y I+ +++ I A+ Sbjct: 360 IVLRIDSGGGEVFASEEIRRAVERCIVRAKKPVVVSMGAVAASGAYWIASSADYIFASPY 419 Query: 127 SLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ GSIGVL P + L K LG+++ V + ++ ++Q + S Sbjct: 420 TITGSIGVLAVMPTFEAALQKYLGITVDGVYLHKF-RPYTGVKNMSETDKSLLQFEIMSI 478 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y F+ VS R + +DK ++ G++++GA AK +GL+D +G + L Sbjct: 479 YKNFITKVSTGRKLSFDKVSDIAGGKVYSGATAKNLGLVDELGNLSDAIAYAAKLADCDG 538 Query: 246 I------RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 R + Y ++ISS + + + + V+ P Sbjct: 539 YSTKVIKRPLSYKEELLKYLMEAKAEMNISSNDFRILYELLSLRSKRGVYVYTP 592 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 79/215 (36%), Gaps = 23/215 (10%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 QI +I +++ + D + LS S S Y + + K+ K + Sbjct: 84 QIVSVSSIIRALKQAAYDRRIDCVFFDLSGLSGWSSGYFSDFAAALQEYKKSGKKLYVFS 143 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + + A Y ++ ++ I+ +GS+ G + + +K + V++ Sbjct: 144 NSYSL-AKYYLASFADEIILDP---LGSVDLSGFYNESLFFGGMEEKFDIHWNVVQAGAY 199 Query: 161 KAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD----------KTLVLS 208 K+ +S E++ + + + + + +++ V+ +RN+P D L Sbjct: 200 KSMAETYSQKEMSEGVKENHRALFTNIWENYIKEVATNRNLPTDVILHYVDNYLDLLKTH 259 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 +G A L+ + E+ L + D Sbjct: 260 NGD--PAETALSAKLVTKIASYEDAEVDLGLVDKD 292 >gi|29655269|ref|NP_820961.1| U7 family peptidase [Coxiella burnetii RSA 493] gi|153206991|ref|ZP_01945809.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii 'MSU Goat Q177'] gi|154705950|ref|YP_001425390.1| signal peptide peptidase [Coxiella burnetii Dugway 5J108-111] gi|165918732|ref|ZP_02218818.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 334] gi|212213444|ref|YP_002304380.1| signal peptide peptidase [Coxiella burnetii CbuG_Q212] gi|212219494|ref|YP_002306281.1| signal peptide peptidase [Coxiella burnetii CbuK_Q154] gi|29542541|gb|AAO91475.1| signal peptide peptidase [Coxiella burnetii RSA 493] gi|120577064|gb|EAX33688.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii 'MSU Goat Q177'] gi|154355236|gb|ABS76698.1| signal peptide peptidase [Coxiella burnetii Dugway 5J108-111] gi|165917560|gb|EDR36164.1| signal peptide peptidase SppA, 36K type [Coxiella burnetii RSA 334] gi|212011854|gb|ACJ19235.1| signal peptide peptidase [Coxiella burnetii CbuG_Q212] gi|212013756|gb|ACJ21136.1| signal peptide peptidase [Coxiella burnetii CbuK_Q154] Length = 313 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 21/295 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHV----EDNSPHVARIAIRGQIEDSQ-----ELIER 56 + ++ M L+ ++ F+ SS + +V+ + + G I + ++ Sbjct: 25 RNVRFAGWMFILLLFAILIFAPSSSELEARRGDGAYVSLVRMNGTIMSNTTFSALRVVPE 84 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLI 114 + + D ++ +++ ++SPGGS I I ++K + K V+ + AS YL+ Sbjct: 85 LRKAFADKNSKGVVLLINSPGGSPVQASIIRDKIIELKKQYHKKVVVVGEDELASGAYLV 144 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 S ++ I +L GSIGV+ L K+GV+ + + K PF V P+ Sbjct: 145 STGADKIYVNNDTLTGSIGVIMGGFGFVDTLKKVGVTRRLFVAGDHKDRLDPFQPVKPED 204 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 V+ + V+ + F+ V + R + G WTG EA ++G++D V Sbjct: 205 VEKINKVLAQVHQNFIDQVIQGRGNRLHGDRQEIFSGDFWTGKEAAQLGVVDGTANLWTV 264 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS---SLLEDTIPLMKQTKVQ 285 + + ++ KD+ ++ N + L +T PL +Q +V Sbjct: 265 LEREFG------VKDYKDYTTRVSFLQALFHNTATELYFHLTNETSPLREQMQVD 313 >gi|146293490|ref|YP_001183914.1| putative periplasmic protease [Shewanella putrefaciens CN-32] gi|145565180|gb|ABP76115.1| Peptidase S49, N-terminal domain protein [Shewanella putrefaciens CN-32] gi|319426794|gb|ADV54868.1| Peptidase S49 domain protein [Shewanella putrefaciens 200] Length = 338 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 13/234 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + + + V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 85 TEGDTSKGKVFVIDFKGSIDAAEVASLREEISAILAIAE--KGDEVVVNVESGGGMVHGY 142 Query: 84 EAIFRAIQKVKNRKPV-ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ + V ++AAS GY+++C +N I AA ++VGSIGV+ Q P Sbjct: 143 GLASSQLDRLRQADILLTVCVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFN 202 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + K + F E + Q Q+ ++ ++ F VS+ R P Sbjct: 203 RLLKKHEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQEELEETHVLFKAFVSKYR--PEL 260 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G W G +A ++GL+D + ++V SL D+ + K++ K Sbjct: 261 NLEKVATGEHWYGQQAIELGLVDEILTSDDVVMSLAK---DRKVYKLRYQVKKK 311 >gi|113969812|ref|YP_733605.1| putative periplasmic protease [Shewanella sp. MR-4] gi|113884496|gb|ABI38548.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. MR-4] Length = 338 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 10/220 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + V I +G I+ ++ E I I I+ ++V++ S GG + Sbjct: 90 SKGKVFVIDFKGSIDAAEVASLREEISAILTIAE--KGDEVVVNVESGGGMVHGYGLASS 147 Query: 89 AIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K Sbjct: 148 QLDRLRQAEIPLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLLKK 207 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + K + F E + Q Q ++ ++ F VS+ R P + Sbjct: 208 HEIDYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLAKV 265 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + G W G +A ++GLID + ++V L +R Sbjct: 266 ATGEHWYGQQAIELGLIDAISTSDDVLMQLAGERTVYKLR 305 >gi|256374226|ref|YP_003097886.1| peptidase S49 [Actinosynnema mirum DSM 43827] gi|255918529|gb|ACU34040.1| peptidase S49 [Actinosynnema mirum DSM 43827] Length = 290 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 22/276 (7%) Query: 33 DNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 D P VA + + G I ++Q + + R + A+ + ++SPGG+ Sbjct: 20 DRGPVVAAVRLHGVITPNPGPVAARGSLNAQSVESALTRAFEHERLVAVALLVNSPGGAP 79 Query: 81 YAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I ++++ ++ PV+ ++AAS GY ++CA++ I A TSLVGSIGV+ Sbjct: 80 TQSALIADRVRELAAKRRVPVLAFCEDVAASGGYWLACAADEIHAHPTSLVGSIGVVSSG 139 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +++ GV + + K PF + V ++ + + F V+E R Sbjct: 140 FGLTGLMERFGVERRVHSAGESKVRLDPFQPEKAEDVAWLEGLQSELHEQFKAWVTERRG 199 Query: 199 IPY-DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 L G +WTGA+A ++GL+D +G V G +I P +N Sbjct: 200 RRLAADAPDLFAGEVWTGAKALELGLVDGLGTLRGVI------GKRYPDAEIAIAEPRRN 253 Query: 258 YWFCDLKNLSISSLLEDTI-PLMKQTKVQGLWAVWN 292 + S+ D + + + + W+ + Sbjct: 254 LLSRLGLGNAASTRSGDFVTQALASLEERARWSRFG 289 >gi|310821606|ref|YP_003953964.1| Signal peptide peptidase SppA [Stigmatella aurantiaca DW4/3-1] gi|309394678|gb|ADO72137.1| Signal peptide peptidase SppA [Stigmatella aurantiaca DW4/3-1] Length = 578 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 9/233 (3%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 L L++L+ + P A S +++ + RD A A+++ ++ Sbjct: 305 LGLISLSGMIVPGRGSSGPIGPKTA---------GSDAVVKAVRAAGRDKRAKAVVLYIN 355 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA A E I AIQ+V +KPVI V ++AAS GY+ + + I ++ ++VGSIGV Sbjct: 356 SPGGSALASELILEAIQRVARKKPVIAYVDQVAASGGYMAALGAQEIWSSPHAVVGSIGV 415 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + LG+ + S P ++ V+ +Y F+ V+ Sbjct: 416 FAGKFEASGLMAHLGIHRTLLTRGENAGIFSVSRGFTPHERASLEAEVEETYQAFLAHVA 475 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++R ++ +GR+++G GL+D VG EE + ++ R Sbjct: 476 KARRRTTEEIHARGEGRVYSGTRGLAAGLVDRVGSFEEACRYALERAGVKTER 528 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 80/201 (39%), Gaps = 16/201 (7%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNR-KPVI- 100 + + E + +++D +++ L G A + + + + + ++ K V+ Sbjct: 67 TVSSLESFREALGLLAKDPRVQGILLELE---GLAVSSAKKDELVKQLMAFRSAGKRVVG 123 Query: 101 --TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V + G+ + CA++ ++ A V +G + + L ++G+ V+ Sbjct: 124 WAVSVDNL----GFQVLCAADEVLLAPAGRVDLVGYAAEATALGEGLARVGIQAHFVRRG 179 Query: 159 PMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K P F+ V+ Q ++ +D Y V ++ R ++ L D ++ Sbjct: 180 AYKTAPELFTHERVSDIQQQTLEAFLDERYAELVNAIAGGRKRSPEEARALIDAGPYSAQ 239 Query: 217 EAKKVGLIDVVGGQEEVWQSL 237 A GL+D + + E+ L Sbjct: 240 RAVAAGLVDALCSEAELPARL 260 >gi|296329047|ref|ZP_06871553.1| signal peptide peptidase SppA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153851|gb|EFG94663.1| signal peptide peptidase SppA [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 589 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + + D++ V I + G I +SQ E +E++ ++ A+++ Sbjct: 303 YYKEGSMVDSNNIVYVIPLEGDIVESQTEVFSGEENINVSETLEKLNIAKENNKVKAVVL 362 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I + ++++ KPV + +AAS GY IS ++ I ++ GS Sbjct: 363 RVNSPGGSALTSDIIAKKVKELAEEKPVYVSMSSVAASGGYYISTNAHKIFVDRNTITGS 422 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S S K + + Y F+ Sbjct: 423 IGVVSILPDFSKLITDNGVNIEKISDGEYSDLYSADS-FTEKKYNKIYNSNLKVYEDFLS 481 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS+ R I +K +++GRIWTG EA K+GL D +GG E ++ Sbjct: 482 VVSKGRRIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNETIYAIAE 529 Score = 85.2 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 26/216 (12%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ IE IS DD +I+ L+ G S E + I + K +I + Sbjct: 95 TLLQSIEAISYDDRVEGIILKLN---GDSLSYAQSEELAHEISMARAANKKIIAYFENVG 151 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP------FLDKLGVSIKSVKSSPMK 161 Y ++ +N I + + YPY K DK GV + K Sbjct: 152 RK-NYYLASYANEIYMPSANSTN----VNIYPYFKENFYIKGLADKFGVKFNIIHVGDYK 206 Query: 162 AEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEA 218 + + ++ +A + V+D +Y+ F+ +VS +R I + + DG + + A Sbjct: 207 SYMENLASNTMSKEAKEDTVRVLDKNYNNFLDVVSLNRKINREDLDKIIKDGELVAASSA 266 Query: 219 --KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 LID + V +G I I+++ Sbjct: 267 DLMNNNLIDKYVYWDNVISM---VGGKDKIITIQEY 299 >gi|222111810|ref|YP_002554074.1| peptidase s49 [Acidovorax ebreus TPSY] gi|221731254|gb|ACM34074.1| peptidase S49 [Acidovorax ebreus TPSY] Length = 347 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 22/297 (7%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + +V+L+ + + ++PH A + ++G+I ++ ++ + Sbjct: 63 WRNFWRLAWVLLAGAVIWAALSREMTATSKSTPHTAVVDVKGEIAAGAEASAEFVVAAMR 122 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISC 116 D + A+++ ++SPGGS I I ++K + KPV V E ASA Y I+ Sbjct: 123 SAFEDSGSQAVVLLINSPGGSPVQAGIINDEIVRLKAKYNKPVYAVVEETCASAAYYIAA 182 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL ++KLGV + + + K PFS Sbjct: 183 AADGIFVDKASIVGSIGVLMDGFGFTGAMEKLGVERRLLTAGENKGFLDPFSPQTETQRA 242 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F+ +V + R T G WTG +A ++GL D +G + V + Sbjct: 243 YAQAMLDQIHQQFIGVVKQGRGDRLKVTPETFSGLFWTGQQAVEMGLADQLGNLDYVARE 302 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + D+ N K + + V+GL A+ P Sbjct: 303 VV------KAEDVIDYTRRDNVAERLAKKFGAA---------VGMGAVKGLAALQLP 344 >gi|94984761|ref|YP_604125.1| peptidase S49 [Deinococcus geothermalis DSM 11300] gi|94555042|gb|ABF44956.1| peptidase S49 [Deinococcus geothermalis DSM 11300] Length = 536 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 22/240 (9%) Query: 37 HVARIAIRGQI-------------------EDSQELIERIERISRDDSATALIVSLSSPG 77 VA +++ G I S ++ ++ +DD A+++ ++S G Sbjct: 263 RVAVVSLVGSIVPGKSRHNPLPLPLLGGPLAGSDTVVAALKHAKKDDKTKAIVLYVNSGG 322 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA A + I+R + + KPV+ + E AAS GY + + IVA+ +L GSIGV+ Sbjct: 323 GSALASDLIWREV--ATSEKPVVAVMGEYAASGGYYVLTHARHIVASPYTLTGSIGVVSG 380 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P ++ F + G+ + V S S + + ++ + Y FV V+E R Sbjct: 381 KPVLQEFNARHGLKPEPVGS-ERALMYSAARPFSDEERAHVEQGIAEVYDRFVNRVAEGR 439 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + ++ + GRIW+G +A +GL+D +G + L + + P K Sbjct: 440 GMTPERVNEIGRGRIWSGLDALDLGLVDELGDLRTGIERACELAGLPYDAPVWNATPAKT 499 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 82/186 (44%), Gaps = 3/186 (1%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L R++++ D ++V +S + AI + + ++ K V+ + ++ +A Sbjct: 54 EGLAARVDKLRHADWLHGVLVRISEFTAAPATAHAIRQLLARLAQDKRVVAYLPQLTMTA 113 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE- 169 L + + IVA E++ V G Q ++ FL + G+ ++++ KA + FS+ Sbjct: 114 -LLAASGAREIVAPESADVLVPGFAVQPTFLGAFLKRHGIEFENLRIREYKAALTRFSQD 172 Query: 170 -VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++ + + + S + ++ +R + G + + A+ GLI V Sbjct: 173 HMDEANREQLTAYLHSLEKAWALDLAAARGVSEATARTWLRGDLTSARAAQAAGLITQVA 232 Query: 229 GQEEVW 234 ++E+ Sbjct: 233 YEDELV 238 >gi|332091664|gb|EGI96744.1| peptidase family S49 family protein [Shigella boydii 5216-82] Length = 346 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 89 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 146 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 147 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 206 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 207 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 264 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 265 SLDIDQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 303 >gi|315297262|gb|EFU56542.1| putative signal peptide peptidase SppA [Escherichia coli MS 16-3] Length = 349 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINASDEVILSLME 306 >gi|51246051|ref|YP_065935.1| proteinase IV [Desulfotalea psychrophila LSv54] gi|50877088|emb|CAG36928.1| related to proteinase IV [Desulfotalea psychrophila LSv54] Length = 606 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 10/211 (4%) Query: 32 EDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 P +A G+I S+ LI I+ D++ AL++ ++S GGSA+A Sbjct: 315 SSEKPTIAVAIAEGKILPGLQPAGVIGSESLIRIIKEARDDENIKALVLRINSGGGSAFA 374 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + K + K +I + +AAS GY IS ++ I A+ ++ GSIG+ P Sbjct: 375 SELIRQELLAFKAKGKTLIVSMGRLAASGGYWISADADQIWASPATITGSIGIFAAIPTF 434 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + L LG+ V +SP+ + + +Q + Y F+ +VS R I Sbjct: 435 EKSLAHLGIYCDGVGTSPLAGATNISKPLTEPIKAALQISIKHGYRQFINIVSIGRGIEP 494 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 +K ++ G +++G +A ++GL+D +G + Sbjct: 495 EKVEAMAQGHVYSGKKALQLGLVDKLGNLSQ 525 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 115/347 (33%), Gaps = 73/347 (21%) Query: 3 FVLKKIKTR-------------YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED 49 F++K K + ++ ++V F S + + + G I + Sbjct: 5 FIMKIFKFFIKTLNILRLLILNFFFWGIIIFSLVLFINKEEATLESNSILLLNLNGNIVE 64 Query: 50 S-------------------------QELIERIERISRDDSATALIVS--------LSSP 76 +++I IE+ ++D ++ + +S Sbjct: 65 EKTALSPLTGLAGDYLNRAPKQEMRLRDIIRVIEQAAKDPKIVSIQLDTTKMGNAGFNS- 123 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 + I +A+ K K I + + + GY ++ ++ I+ VG G+ Sbjct: 124 ------LKDISKALDLFKKSKKKIIAIQDNYSQKGYYLAAHADTIIMNPVGFVGVHGLSS 177 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ--DVVDSSYHWFVRLVS 194 Y K +DKL ++ K+ PF+ + Q D + + + + Sbjct: 178 YRLYFKRAIDKLFINYNVFLVGDYKSALEPFTRNSMSGRDKEQTRDWLTDLWGIYRNDII 237 Query: 195 ESRNIPYDKT---------LVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 R++ +L++ G + A + GL+D + + +V L L + Sbjct: 238 AQRDLSDANMLYNYTHNLPELLAEVGGD--SAKLAVQAGLVDKLLQRHQVSPYLKELSYN 295 Query: 244 QS----IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 + PP+ Y + ++++ +P ++ V G Sbjct: 296 PENTVDFNQYLATIPPREYS-SEKPTIAVAIAEGKILPGLQPAGVIG 341 >gi|319940786|ref|ZP_08015125.1| hypothetical protein HMPREF9464_00344 [Sutterella wadsworthensis 3_1_45B] gi|319805668|gb|EFW02449.1| hypothetical protein HMPREF9464_00344 [Sutterella wadsworthensis 3_1_45B] Length = 602 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 8/249 (3%) Query: 38 VARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 VA + G I D++EL++RIER + S AL++ +SSPGG A A EAI + Sbjct: 318 VAVVLAEGAISSTGATGIDAEELVQRIERAASAPSTKALVLRISSPGGDALAAEAIREKL 377 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 V+ + PVI + AAS GY IS A++ IVA +L GSIGV P L+KL Sbjct: 378 AAVRTKGLPVIVSMGNAAASGGYWISLAADRIVADPLTLTGSIGVFSIVPDAAAALEKLE 437 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + I ++S SP + N +++ V +Y F L ++SR + L+ Sbjct: 438 LGIGGFRTSDFADFGSPLHKPNAAEAALLRAGVMRTYARFKDLTAQSRKKTPEAVEALAQ 497 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 GRIW G +A + GL+D +G + + + ++ I+ ++ + L L Sbjct: 498 GRIWMGTQAAQNGLVDKLGDLNDAVKLARQVAGLKTNEPIRIYDVEADAMTSMLSGLMGE 557 Query: 270 SLLEDTIPL 278 ++L+ + L Sbjct: 558 AMLKVFVQL 566 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 102/298 (34%), Gaps = 55/298 (18%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSP-HVARIAIRGQIEDSQ-------- 51 ++F + + + LV +++ + P + + + G + +S Sbjct: 11 LDFCRRLVLNLIFLGVLVAAALIWLFARPNTPAVEPGTLLVLDLDGAVVESDPLRSISAD 70 Query: 52 ---------------ELIERIERISRDDSATALIVSLSSPG----GSAYAGEAIFRAIQK 92 ++ E + D+ +I+ + G G A A I AI+ Sbjct: 71 LKSLMKSRGASTRLIDVTEALRFAGSDERIAGVIIKVD--GLTKLGLASA-RTIGSAIED 127 Query: 93 VKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSL--VGSI---GVLFQYPYVKPFL 145 K KPV + AS Y + + A +L +GS+ G+ Y FL Sbjct: 128 YKTASGKPVFSW-----ASG-YTQAQYAAAAHADVVALHPMGSVMVKGLSGTTLYWGGFL 181 Query: 146 DKLGVSIKSVKSSPMKAEPSPFS---EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +KLG+ + K+ K+ P +S + + + ++ F + ++R + Sbjct: 182 EKLGIGVSVFKAGAFKSAPEAYSLRAPTTDNLIAQ-EGYLSEAWKVFASDLEDARGLIPG 240 Query: 203 KTLVLSDGRIWT-------GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 G AK GLI + +E ++L +++ +K N Sbjct: 241 SVDTYLKGLPERLNAGESPAEAAKAAGLITDLMAREAFDETLAKQFGGGNLKNVKTVN 298 >gi|293409659|ref|ZP_06653235.1| protease sohB [Escherichia coli B354] gi|291470127|gb|EFF12611.1| protease sohB [Escherichia coli B354] Length = 349 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 10/212 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P V + +G ++ + E I + + +++ L SPGG + Sbjct: 99 SKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVHGYGLAAS 156 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL Sbjct: 157 QLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKS 216 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + I+ + K + E + + ++ ++ ++ F V R P + Sbjct: 217 KDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIEQV 274 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G W G +A + GL+D + +EV SL Sbjct: 275 ATGEHWYGQQAVEKGLVDEINTSDEVILSLME 306 >gi|319763864|ref|YP_004127801.1| peptidase s49 [Alicycliphilus denitrificans BC] gi|330823872|ref|YP_004387175.1| peptidase S49 [Alicycliphilus denitrificans K601] gi|317118425|gb|ADV00914.1| peptidase S49 [Alicycliphilus denitrificans BC] gi|329309244|gb|AEB83659.1| peptidase S49 [Alicycliphilus denitrificans K601] Length = 346 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 16/285 (5%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVE--DNSPHVARIAIRGQI-----EDSQELIERIERIS 61 R+ L L+ L ++PH A + ++G+I ++ ++ + Sbjct: 67 FWRFGWLVLIVLVGWAVVSRDIASPAKSAPHTAVVDVKGEIAAGAEASAEFVVAAMRSAF 126 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASN 119 D + A+++ ++SPGGS I I ++K + KPV V E ASA Y I+ A++ Sbjct: 127 EDSGSQAVVLLINSPGGSPVQAGMINDEIVRLKAKYNKPVYAVVEETCASAAYYIAAAAD 186 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I + S+VGSIGVL ++KLGV + + + K PFS +P Q Sbjct: 187 DIFVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTAGENKGFLDPFSPQSPTQRGYAQ 246 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ V + R T G WTG +A ++GL D G + V + + Sbjct: 247 QMLDQIHQQFIAAVKKGRGERLKATPETFSGLFWTGQQAVEMGLADQFGSLDYVAREIV- 305 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + D+ ++ L ++ E + M+ V Sbjct: 306 -----KAEDVIDYT-RRDNVAERLARKFGATFGETVLRGMRAAPV 344 >gi|307941593|ref|ZP_07656948.1| Na(+)/H(+) antiporter NhaA [Roseibium sp. TrichSKD4] gi|307775201|gb|EFO34407.1| Na(+)/H(+) antiporter NhaA [Roseibium sp. TrichSKD4] Length = 285 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 20/279 (7%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGS 79 + + V + ++G I + L +++E+ A A+ + ++SPGGS Sbjct: 11 AKFRNEGQTVPVVRLQGAIGMATPLRPGLSLAGVAQQLEKAFSMKKAPAVALVINSPGGS 70 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I++ I+ + + K V+ V ++AAS GY+I+ A + I+A +S+VGSIGV+ Sbjct: 71 PVQSRLIYKRIRDLAEKHEKEVLVFVEDVAASGGYMIAVAGDEIIADPSSIVGSIGVVSA 130 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +K ++KLGV + + K PF + P+ ++ ++ + + F+ +V R Sbjct: 131 GFGMKGLIEKLGVERRVYTAGENKVTLDPFQDEKPEDIEHLKSLQLEIHETFIDMVKARR 190 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + L G+ W G A+ +GL+D +G +S + ++K + PK Sbjct: 191 SDVLSDNPDLFTGKFWAGKTARDLGLVDALGDVRSTLKSRFG-----EKTELKLISAPKG 245 Query: 258 YWFCDLKNLSISSLL----EDTIPLMKQTKVQGLWAVWN 292 + +S+L T L+ + + LW + Sbjct: 246 LFGRRTGGNGVSALFGMDKSMTDDLVSSVEERALWMRFG 284 >gi|297839273|ref|XP_002887518.1| hypothetical protein ARALYDRAFT_476539 [Arabidopsis lyrata subsp. lyrata] gi|297333359|gb|EFH63777.1| hypothetical protein ARALYDRAFT_476539 [Arabidopsis lyrata subsp. lyrata] Length = 676 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I +++LIE+I + A I+ + Sbjct: 364 WTLGLSGGRDQIAIIRAGGSISRVKGPLSTPGSAIIAEQLIEKIRSVRESKKFKAAIIRI 423 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A+N IVA +L GSIG Sbjct: 424 DSPGGDALASDLMWREIKLLAETKPVIASMSDVAASGGYYMAMAANTIVAENLTLTGSIG 483 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + +++ + P+ ++ + +Y F Sbjct: 484 VVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPFKPEEAELFEKSAQHAYQLFRDK 543 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + SR++P DK ++ GR+WTG +A GL+D +GG +K+ Sbjct: 544 AALSRSMPVDKMEEVAQGRVWTGRDAHSRGLVDALGGLSRAIAIAKQKANIPLNKKVTLV 603 Query: 253 NPPK-NYWFCDLKNLSISSLL 272 + + D+ + SS++ Sbjct: 604 ELSRPSTSLPDILSGIGSSVI 624 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 88/232 (37%), Gaps = 19/232 (8%) Query: 41 IAIRGQIEDS-----------QELIERIERISRDDSATALIVSLS--SPG-GSAYAGEAI 86 + +RGQI D +L E + + D + + + S G G E + Sbjct: 129 MTLRGQISDQLKSRFNSGLSLPQLSENFVKAAYDPRIAGVYLHIDPLSCGWGKV---EEL 185 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R I K I + + + CA N + A ++ G+ Q ++ + Sbjct: 186 RRHILDFKKSGKFIVGYISICGLKEFYLGCACNELYAPPSAYSFLYGLTVQASFLGGVFE 245 Query: 147 KLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+G+ + + K+ S ++ + +M+ ++D+ Y ++ VS+S + Sbjct: 246 KVGIEPQVQRIGKYKSAGDQLSRKNISEENYEMLSVLLDNIYANWLDGVSDSTGKKREDV 305 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + ++ + K+ GLI + +EV L + +K+ + K Sbjct: 306 ENFINQGVYEIEKLKEEGLIKDIRYDDEVIAMLKERLGVEKDKKLPTVDYKK 357 >gi|225569105|ref|ZP_03778130.1| hypothetical protein CLOHYLEM_05185 [Clostridium hylemonae DSM 15053] gi|225161904|gb|EEG74523.1| hypothetical protein CLOHYLEM_05185 [Clostridium hylemonae DSM 15053] Length = 325 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 20/272 (7%) Query: 34 NSPHVARIAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGS 79 NS ++A + + G I++ +E I+ + D T +++ + SPGG+ Sbjct: 52 NSDYIAVVKVEGTIQEQTASSLFETAEGYQHTTTMEYIDFLMSDSDNTGILLYVDSPGGT 111 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 Y E +++ + + K+ +P+ + AAS GY +S A++ I A ++ GSIGV+ Sbjct: 112 VYESEELYQKLNEYKDATGRPIWGYMAHYAASGGYYVSMAADNIYANPNTVTGSIGVIMA 171 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + +KLG+ S+ S K S+++ + + Q VD S+ FV +V++ R Sbjct: 172 GYDMSGLYEKLGIRYVSITSGKNKDS----SKLDEDQIAIYQTQVDESFGRFVDIVADGR 227 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ D+ L+DGR +T +AK+ GLID + E++ + + ++K Sbjct: 228 DMSSDEVKKLADGRTYTAKQAKENGLIDNISLYEDIKADMGSELGTNVFYELKSKTSALA 287 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 F +K L S + + + GL Sbjct: 288 SLFGSVKELVPKSEAQVLTETASEKENGGLMY 319 >gi|83854903|ref|ZP_00948433.1| peptidase, family S49 [Sulfitobacter sp. NAS-14.1] gi|83842746|gb|EAP81913.1| peptidase, family S49 [Sulfitobacter sp. NAS-14.1] Length = 265 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 9/218 (4%) Query: 34 NSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + P V+ + + G I + + I++ A+++ +SSPGGS I Sbjct: 10 SRPTVSVVRLSGVIGGRTRGGLNDSGIGPAIDKAFNRGKPAAVVLEISSPGGSPVQSSLI 69 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ + K PVI V ++AAS GY ++ A++ I A +S++GSIGV+ F Sbjct: 70 GARIRRLADEKNIPVIAFVEDVAASGGYWLAAAADEIYADPSSVLGSIGVISASFGADEF 129 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + + GV + + K+ PF P+ V ++ +++ + F+ V+ R Sbjct: 130 IQRHGVERRVYTAGQSKSMLDPFRPEKPEDVARLKQLLEDIHGNFIDHVTSRRGSKLSSD 189 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G +W A ++GLID +G + + + V Sbjct: 190 TDLFTGEVWLAKRATELGLIDGIGHLRPMIKQRFGDKV 227 >gi|82776631|ref|YP_402980.1| putative periplasmic protease [Shigella dysenteriae Sd197] gi|309789066|ref|ZP_07683661.1| peptidase family S49 family protein [Shigella dysenteriae 1617] gi|81240779|gb|ABB61489.1| putative protease [Shigella dysenteriae Sd197] gi|308923337|gb|EFP68849.1| peptidase family S49 family protein [Shigella dysenteriae 1617] Length = 346 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 89 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 146 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 147 GYGLASSQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 206 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 207 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 264 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 265 SLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLME 303 >gi|256827350|ref|YP_003151309.1| signal peptide peptidase SppA, 36K type [Cryptobacterium curtum DSM 15641] gi|256583493|gb|ACU94627.1| signal peptide peptidase SppA, 36K type [Cryptobacterium curtum DSM 15641] Length = 376 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 19/268 (7%) Query: 6 KKIKTRYVMLSLVTLTVV-YFSWSSHVED------------NSPHVARIAIRGQIE---- 48 KK R + LS+V L + F S V VA I + G I Sbjct: 68 KKHTGRIIALSIVALLALTVFLMGSCVNTLIGAAREGAEHAQPNSVAVITMSGTIGYNGT 127 Query: 49 --DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + L E ++ D + A+++ ++S GG+A AGE + ++ K KP++ + Sbjct: 128 SCSPEGLKELLDEAQADPNIKAVVLRVNSGGGTATAGEEMASYVRDFKASKPIVVSSAAI 187 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 SA Y IS ++ I A+++ +GSIG + Q + LGV+I ++ S+ K Sbjct: 188 NCSAAYEISSQADRIFVAKSTEIGSIGTVMQSIDYSGLMKLLGVNIDNIASAESKDSSYG 247 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + + QD+VD F V++ R++ ++ L+ G +TG A GL D Sbjct: 248 SRPLTDEERAYYQDLVDQINAVFTDNVAQGRHLSAEEVSQLATGLPFTGVTAVNNGLADE 307 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +G E+ + +L S K P Sbjct: 308 IGTLEDALDAAASLAGLDSYSKTTLELP 335 >gi|114047041|ref|YP_737591.1| putative periplasmic protease [Shewanella sp. MR-7] gi|113888483|gb|ABI42534.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella sp. MR-7] Length = 338 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 10/217 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 V I +G I+ ++ E I I I+ ++V++ S GG + + Sbjct: 93 KVFVIDFKGSIDAAEVASLREEISAILTIAE--KGDEVVVNVESGGGMVHGYGLASSQLD 150 Query: 92 KVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K + Sbjct: 151 RLRQAEIPLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLLKKHEI 210 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + K + F E + Q Q ++ ++ F VS+ R P ++ G Sbjct: 211 DYEQHTAGDFKRTLTVFGENTDEGRQKFQQELEETHVLFKAFVSKYR--PQLDLAKVATG 268 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 W G +A ++GLID + ++V L +R Sbjct: 269 EHWYGQQAIELGLIDAISTSDDVLMQLAGERTVYKLR 305 >gi|153007859|ref|YP_001369074.1| peptidase S49 [Ochrobactrum anthropi ATCC 49188] gi|151559747|gb|ABS13245.1| peptidase S49 [Ochrobactrum anthropi ATCC 49188] Length = 290 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 19/272 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A+ +SL+SPGGS I+ Sbjct: 20 IPVVRLHGAIMSGGSAFRPMLSLASTAAVLEKAFTDKETPAVAISLNSPGGSPVQSRLIY 79 Query: 88 RAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + +K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 RRIRDLAAEHQKKVFIFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF ++ ++ + + F+ +V E R + Sbjct: 140 KKIGVERRVYTAGSNKVTLDPFQPEKKTDIERLKSLQLEIHETFIDMVKERRGTKLAEDK 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK-----DWNPPKNYWF 260 L G WTG + ++GLID +G + Y V + + K P + Sbjct: 200 DLFTGLFWTGIKGHELGLIDGLGDMRSFLRKTYGDKVKLKLVEQKRGLLGRKMPGIDMAL 259 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +L+ SI++ L D L+ + + LW + Sbjct: 260 GNLEPASIAAHLGD--GLLSVAEEKALWGRYG 289 >gi|118487709|gb|ABK95679.1| unknown [Populus trichocarpa] Length = 625 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I ++LIE+I + A I+ + Sbjct: 314 WTLGLTGGRDLIAIIRASGSISRVKSPLSLSGSGIIGEQLIEKIRQARESKKYKAAIIRI 373 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A++ IVA +L GSIG Sbjct: 374 DSPGGDALASDLMWREIRLLAESKPVIASMSDVAASGGYYMAMAADTIVAENLTLTGSIG 433 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + + + + + P ++ ++Y F Sbjct: 434 VVTGKFSLGKLYEKIGFNKEIISRGKYAELLAADQRPLRPDEAELFAKSAQNAYEQFRDK 493 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + SR++P DK ++ GR+WTG +A GL+D +GG R++ Sbjct: 494 AAFSRSMPVDKMEEVAQGRVWTGQDAASRGLVDAIGGFSRAVAIAKQKANIPQDRQV 550 Score = 42.9 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 43/109 (39%), Gaps = 2/109 (1%) Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFV 190 G Q ++ + +G+ + K+ + ++ + +M+ ++D+ Y ++ Sbjct: 182 GFTVQAAFLAGVFENVGIQPDVQRIGKYKSAGDQLTRKSMSKENCEMLTAILDNIYGNWL 241 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 VS ++ + + ++ K+ GLI + +EV L Sbjct: 242 DKVSSTKGKKIEDMKNFINEGVYKVERLKEEGLITNMHYDDEVISMLKE 290 >gi|269217110|ref|ZP_06160964.1| signal peptide peptidase SppA [Slackia exigua ATCC 700122] gi|269129247|gb|EEZ60332.1| signal peptide peptidase SppA [Slackia exigua ATCC 700122] Length = 406 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 8/242 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +S + VA I + G I + L ++ + DD A+++ ++S GG++ Sbjct: 138 ASSLSTYGDSVAVITMSGTIGYDGSACSPEGLRAALKSVEADDDIKAVVLRVNSGGGTST 197 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AGE + + I KP++ + SA Y IS ++ I ++ +G+IG + Q Sbjct: 198 AGEEMSQLIAGF--DKPIVVSSASINCSAAYEISSQADYIYVNHSTAIGAIGTIMQTYDA 255 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 LDKLG+ + S+ S+ K + + + Q++V FV V+ R + Sbjct: 256 SELLDKLGIKVNSIASAESKDSSYGTRPLTDEEREYYQNLVSQINAQFVSSVASGRGMSV 315 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + L+ G +TG +A GL D +G ++ LG + + D +P ++ Sbjct: 316 AQVQELATGMEFTGDDAVANGLADEIGTYDDALAKAAELGGIKGDFDVVDADPSRSDLAS 375 Query: 262 DL 263 L Sbjct: 376 LL 377 >gi|149912749|ref|ZP_01901283.1| peptidase S49 [Roseobacter sp. AzwK-3b] gi|149813155|gb|EDM72981.1| peptidase S49 [Roseobacter sp. AzwK-3b] Length = 265 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 9/219 (4%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P V+ I + G I + L IE+ R A+ + ++SPGGS Sbjct: 9 NRGPVVSVIRLSGTIGAGSRAQLSDEALAPSIEKAFRRGKPKAVALLINSPGGSPVQSSL 68 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ K PV V ++AAS GY ++ A++ I S+VGSIGV+ Sbjct: 69 IASRIRRLAEEKDIPVHAFVEDVAASGGYWLATAADDIWVDPASIVGSIGVISAGFGAPV 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L + GV + S K+ PF + V ++D+++ + F V+ R + Sbjct: 129 LLARQGVERRVHTSGKSKSFLDPFLPQKDEDVSRLKDILEQMHKVFEAQVTSRRGDKLAQ 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G W G A ++GL+D +G + LY V Sbjct: 189 NDDLFTGEFWLGQRAVELGLVDGIGHVAPKMKELYGDKV 227 >gi|110597071|ref|ZP_01385360.1| signal peptide peptidase SppA, 67K type:signal peptide peptidase SppA, 36K type [Chlorobium ferrooxidans DSM 13031] gi|110341262|gb|EAT59727.1| signal peptide peptidase SppA, 67K type:signal peptide peptidase SppA, 36K type [Chlorobium ferrooxidans DSM 13031] Length = 602 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 14/267 (5%) Query: 32 EDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPG 77 + +A I + G I D + L ++ D AL++ + SPG Sbjct: 297 GEGDERIALITLSGPIVRTAGESALGMGEGVDVESLKHSLDAALDDKKVKALVLRIDSPG 356 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + + + +KP++ + +AAS GY+ + A + A+ ++ GSIGV Sbjct: 357 GDALASAEMLQMLDSAAVKKPLVVSMSGVAASGGYMAALAGKTVFASPLTITGSIGVYAL 416 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P + + K G+ V + SPF ++ +A Q Y F+ V+ SR Sbjct: 417 KPEISALVAKTGLGRDVVTRGRLADANSPFKPLDKEAYQKFVAASGEIYDDFIGKVARSR 476 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +P ++ GR+W+G A K GL+D GG + + L + + P+ Sbjct: 477 RMPLTAVDSVAGGRVWSGTRALKAGLVDRTGGLFDAIHAARLLAKMDMSKNPRIILYPEQ 536 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKV 284 + ++ + L I + ++ Sbjct: 537 KSWIEMLVQGNRAGLPGMIGAAFKKQL 563 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 15/196 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 Q+L+ ++ + D+ L++ + GG S + +I+KV++R K V + Sbjct: 76 QDLLFILDHAAADERVKELLLEI---GGLHASPAKISELRSSIEKVRSRGKKVTAFLSSP 132 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S YL++ A + IV + G+ + + L K+G+ ++ + K+ P Sbjct: 133 EDS-DYLLASACDAIVMERGGYLLLDGLKAETLFYTTPLGKIGIRFQAAQWKQYKSGIEP 191 Query: 167 FSEVNPKAVQMMQD---VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI--WTGAEAKKV 221 F+ + + + ++D Y ++ S R I D + D RI + + AK Sbjct: 192 FTR-TGASREYFEQIGGLLDEVYDDYLGYASRRRGISRDSLSGIID-RIALISDSRAKTF 249 Query: 222 GLIDVVGGQEEVWQSL 237 GL+D E+ ++L Sbjct: 250 GLVDSAASSWELKRAL 265 >gi|325003037|ref|ZP_08124149.1| serine protease [Pseudonocardia sp. P1] Length = 298 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 13/272 (4%) Query: 34 NSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +P V+ + + G I ++ + + +ER D A+ + ++SPGGS Sbjct: 26 GAPVVSVVRLHGVISAQAAPVPRQVLNAASVEKVLERAFAPDRLAAVALVINSPGGSPTQ 85 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I I+ + PV+ ++AAS GY ++CA++ I A TS+VGSIGV+ Sbjct: 86 SQLIGDRIRSLAAEAEVPVLAFCEDVAASGGYWLACAADEIYACSTSIVGSIGVVSAGFG 145 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + +DK GVS + + K+ PF + V + + + + F V E R Sbjct: 146 LDGLIDKWGVSRRLHTAGGSKSRLDPFLPEKAEDVAWLTGLQEQLHERFTGWVRERRGDR 205 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 L DG +W G ++++GL+D +G +V + + + + + Sbjct: 206 LAGDTELFDGEVWLGERSRELGLVDGIGTVHDVLDERFPDAEQRPVEQRRPLLARLGAGG 265 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + S + L+ + + WA + Sbjct: 266 GAARAHSFGDPADVAFELLSAVETKATWARYG 297 >gi|19704606|ref|NP_604168.1| protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714902|gb|AAL95467.1| Protease IV [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 565 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 14/228 (6%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + + D++ V I + G I +SQ E +E++ ++ A+++ Sbjct: 279 YYKEGSMVDSNNIVYVIPLEGDIVESQTEVFSGEENINVSETLEKLNIAKENNKVKAVVL 338 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I + ++++ KPV + +AAS GY IS ++ I ++ GS Sbjct: 339 RVNSPGGSALTSDIIAKKVKELAEEKPVYVSMSSVAASGGYYISTNAHKIFVDRNTITGS 398 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + GV+I+ + S S K + + Y F+ Sbjct: 399 IGVVSILPDFSKLITDNGVNIEKISDGEYSDLYSADS-FTEKKYNKIYNSNLKVYEDFLS 457 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VS+ R I +K +++GRIWTG EA K+GL D +GG E ++ Sbjct: 458 VVSKGRRIDKEKLKTIAEGRIWTGDEAIKIGLADEIGGLNETIYAIAE 505 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 24/215 (11%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 L++ IE IS DD +I+ L+ G S E + I + K +I + Sbjct: 71 TLLQSIEAISYDDRVEGIILKLN---GDSLSYAQSEELAHEISMARAANKKIIAYFENVG 127 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGV-----LFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 Y ++ +N I S V + Y+K DK GV + K+ Sbjct: 128 RK-NYYLASYANEIYMPSA---NSTNVNIYPYFKENFYIKGLADKFGVKFNIIHVGDYKS 183 Query: 163 EPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEA- 218 + ++ +A + V+D +Y+ F+ +VS +R I + + DG + + A Sbjct: 184 YMENLASNTMSKEAKEDTVRVLDKNYNNFLDVVSLNRKINREDLDKIIKDGELVAASSAD 243 Query: 219 -KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 LID + V +G I I+++ Sbjct: 244 LMNNNLIDKYVYWDNVISM---VGGKDKIITIQEY 275 >gi|295677195|ref|YP_003605719.1| peptidase S49 [Burkholderia sp. CCGE1002] gi|295437038|gb|ADG16208.1| peptidase S49 [Burkholderia sp. CCGE1002] Length = 333 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 16/289 (5%) Query: 7 KIKTRYVMLSLVTLTVV-YFSWSSH-VEDNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R++ L ++ L V S+S V H A ++I G+I +++++ ++ Sbjct: 49 RIFFRFLFLGVLALVVWGALSFSGERVATTGRHTAMVSIDGEIAADSNANAEDVNTALDS 108 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D + +I+ +SPGGS I +++++ + P + V +M AS GY + Sbjct: 109 AFEDSNTAGVILYCNSPGGSPVQAGIINSEVRRLRGKYPSIPLYVVVGDMCASGGYYAAA 168 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A+ I + S+VGSIGVL +DKLG+ + S K PFS PK + Sbjct: 169 AAEKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFFDPFSPETPKMDE 228 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F+ V + R +T + G WTG ++ ++GL D G V + Sbjct: 229 HAQAMLDQIHAQFIDAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGFGDTNYVARE 288 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 ++ I D+ ++ + + + K+ Sbjct: 289 IF------KAPDIVDYTVKESITDRVARKFGAAVGASAVRAMALGAKIN 331 >gi|289582267|ref|YP_003480733.1| signal peptide peptidase SppA, 36K type [Natrialba magadii ATCC 43099] gi|289531820|gb|ADD06171.1| signal peptide peptidase SppA, 36K type [Natrialba magadii ATCC 43099] Length = 334 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 125/265 (47%), Gaps = 20/265 (7%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED----------------SQ 51 + + L ++ L + S + S +VA +A+ G I + Sbjct: 38 LFGLVIALVVILLGIKVISGIASSMFASYNVAEVAVEGPITRDGGGGGPLPSRPQSTPAD 97 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++E+I+R D++ AL++ L++PGG + I A ++ P + +++ AS G Sbjct: 98 DIVEQIDRADEDENVDALLLKLNTPGGEVVPSDDIRLAAERF--DGPTVAYTNDVCASGG 155 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ + + A + S+VGSIGV+ +K+G+S + + K +P E+ Sbjct: 156 YWIASGCDALWARDGSIVGSIGVIGSRVNASDLAEKVGLSYERFAAGEFKDAGTPLKELE 215 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 +Q ++D Y FV VS+ R++ + ++ RI+ G EA ++GL+D +G + Sbjct: 216 EDERAYLQGLIDDYYETFVDRVSDGRDMDPEFVRD-TEARIYLGEEAHELGLVDELGTRR 274 Query: 232 EVWQSLYALGVDQSIRKIKDWNPPK 256 ++ L ++ I+++ P + Sbjct: 275 DLEDELTDQ-LETDEVVIEEFEPQR 298 >gi|292572009|gb|ADE29924.1| Signal peptide peptidase SppA, 36K type [Rickettsia prowazekii Rp22] Length = 304 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S D+ VA + + G I + L E IE+ + AL + ++SPG Sbjct: 30 FASVFGDSKEVVAVLRLSGVIGKVSTMQSGLTLESLNELIEKTFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + V + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAKENKIKVYSFIEDMAASGGYWLACSGDQIYALPSSVIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + KA PF +N +++++D+ Y FV V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKAVLDPFKPINKDDLKIIKDLQKQVYEHFVEYVKN 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + +L +G W G A GLID +G V + + + + Sbjct: 210 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVIKEKFGDNIKF------QYLC 263 Query: 255 PKNYWFCDLKNLSISSLLEDTI 276 K W + L+ED + Sbjct: 264 AKQPWLKKKLGMRSKILIEDLV 285 >gi|295107483|emb|CBL05026.1| signal peptide peptidase SppA, 36K type [Gordonibacter pamelaeae 7-10-1-b] Length = 356 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 8/265 (3%) Query: 34 NSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S V I I G I+ + L +++ + + A+++ ++S GG+A AGE + Sbjct: 92 TSDAVGVIDIDGTIQYDGTTCSPEGLKAQLDVAAENKHIKAVVLRVNSGGGTATAGEEMA 151 Query: 88 RAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +++ KPV+ M ASA Y IS ++ I A+T+ +G+IG Q + L Sbjct: 152 AYVREFSESSGKPVVVSSASMNASAAYEISSQADFIYTAKTTAIGAIGTALQVTDLSGLL 211 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 DKLG+SI++V SS K + + Q++V+ F++ V+E R++ ++ Sbjct: 212 DKLGISIENVTSSDSKDSSYGTRPLTEEERAYYQNMVNQINETFIQTVAEGRDMTVEEVR 271 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L+ G +TG EA + GL D +G +E+ L + + +K NP + Sbjct: 272 ALATGLTFTGMEAVENGLADEIGTREDAVAKAAELANTTAYKTVKLDNPSSSLSDLLDLM 331 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAV 290 +D +K+ + G A Sbjct: 332 SESRLSADDLAQALKELENDGSLAR 356 >gi|254293569|ref|YP_003059592.1| signal peptide peptidase SppA, 36K type [Hirschia baltica ATCC 49814] gi|254042100|gb|ACT58895.1| signal peptide peptidase SppA, 36K type [Hirschia baltica ATCC 49814] Length = 590 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 22/278 (7%) Query: 30 HVEDNSPHVARIAIRG-----------------QIEDSQELIERIERISRDDSATALIVS 72 + D +P +A I G QI S + +I +D+S A++ Sbjct: 285 KIADKAPKIALIGGEGGIMPGSSGGDIFNPNAEQIIASDTVSSQIYDAGKDESIKAIVFR 344 Query: 73 LSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + S GGS A + I+ AI+ V+N KPV+ + +AAS GY IS ++ I A ++ G Sbjct: 345 VDSGGGSPTASDQIWNAIEYVQNTYNKPVVISMGSVAASGGYYISMGADKIYANRATITG 404 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 SIGV + L K+GV+ + P + + ++ + M+ + +Y F Sbjct: 405 SIGVYGGKFALAEGLRKIGVNPSRIDVGGPYASIYTSTERLSEQQRATMRASLARTYDRF 464 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 RL ++ R + + ++ GR+WTG AK+ GL+D +GG + + L + +++ Sbjct: 465 TRLAADGRGMSQEALHEIAKGRVWTGVAAKENGLVDELGGLIDAIEGAKQLAGIDADKQV 524 Query: 250 --KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 P ++ L S+ T+ + Q Sbjct: 525 NLVSMTPEQDPVQAIGSMLGASAQSMHTLNQLSQIMGD 562 Score = 90.6 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 104/276 (37%), Gaps = 30/276 (10%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARI-------------------AIRGQIED 49 ++ + + S + D +P A I ++ GQ Sbjct: 12 FLALILFFIALPIFILTLVSGNASDVAPKGAVILEIDMRYEYPDQKPTDGLASLFGQ-TS 70 Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHE--M 106 +++ +++R + DD +++ S G + E I AI+K++ K V+ + Sbjct: 71 FVDILTKLDRAATDDHVKGVVLRASEMGFGSSRAEEIRSAIKKLQANDKFVLAHSQGFFV 130 Query: 107 AASAGYLISCASNIIVAAETSLVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A Y AS+ I S + SI G + ++K D LG+S + K P+ Sbjct: 131 GGPAAYRAISASDEIWLQAGSDL-SIPGFSLETLFLKGLFDNLGISAEIEAFHEFKNSPN 189 Query: 166 PFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---TLVLSDGRIWTGAEAKK 220 + E + M+++ + + + ++ R + + ++ +A Sbjct: 190 VYKETDFTESHAKAMRELAEGLWQVSLIDIANDRADKMADNAILRDVLENSPYSSDQALD 249 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 +GL+D +G E++ + L + + I + P K Sbjct: 250 LGLVDKLGWPEDLVRHAMGLAPNAELIDIAQYTPKK 285 >gi|290470|gb|AAA24639.1| sohB [Escherichia coli str. K-12 substr. W3110] Length = 349 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 10/219 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 92 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 149 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 150 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPN 209 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 210 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--P 267 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV SL Sbjct: 268 SLDIEQVATGEHWYGQQAVEKGLVDEINASDEVILSLME 306 >gi|319404556|emb|CBI78162.1| protease [Bartonella rochalimae ATCC BAA-1498] Length = 282 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 18/273 (6%) Query: 33 DNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYA 82 N+ + + ++G I S I R +++ A A+ + ++SPGGS Sbjct: 14 SNTVQIPVVRLQGAIISSNSSISRTLSLARCASLLDKAFSYKKAPAVALVINSPGGSPVQ 73 Query: 83 GEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 IF+ I+ + N K V+T V ++AAS GY+I+CA + I + +S+VGSIGV+ Sbjct: 74 SRLIFQRIRDLANEKNKQVLTFVEDVAASGGYMIACAGDEIFSDPSSIVGSIGVVSASFG 133 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K+GV + + K PF V ++ + + F+ LV E R Sbjct: 134 FPELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKSLQLEVHQTFIDLVKERRMSK 193 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + G W+G + ++GLID +G V + + K++ +PPK+ Sbjct: 194 LSDDSNIFTGMFWSGKKGVELGLIDELGDIRSVIKKRFG-----DNAKLRLISPPKSLLS 248 Query: 261 CDLK-NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + +S + +M + + LW + Sbjct: 249 SKVPLGISADTAYTAVDGVMMAAEERALWQRYG 281 >gi|294782115|ref|ZP_06747441.1| protease IV [Fusobacterium sp. 1_1_41FAA] gi|294480756|gb|EFG28531.1| protease IV [Fusobacterium sp. 1_1_41FAA] Length = 551 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 114/233 (48%), Gaps = 11/233 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + ++E++E + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAVINLEGEIDIRESRESVINYDNVVEKLEVLEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--EIPIYISMGDLCASGGYYIATVGKKLFATSVTLTGSIGVVI 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ FS+++ ++ + + ++ Y F V ++ Sbjct: 391 LYPEFTEIINKLKVNMEGFSKGKGFDIFDVFSKLSEESKEKIIYSMNEVYSEFKEHVMQA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 RNI + ++ GR+W G++AK+ GL+D +G + SL + + + Sbjct: 451 RNISEEDLEKIAGGRVWLGSQAKENGLVDELGTLNDCIDSLAKDLELKDFKLV 503 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 17/262 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 ++K+ ++SL + V F+ VED V+ ++I + +++ +E + D Sbjct: 27 LVKRKFKNKDIISLKGVKTVVFNIGDLVEDY--MVSAVSINKAL-SHDIVLKALENLVDD 83 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 +I+ + S E I +K+ K +I + Y I+ +N I Sbjct: 84 KKIEKIIIDVDEIDLSRVHIEEIKEIFKKLSADKEIIA-IGTTFDEYSYQIALLANKIYM 142 Query: 124 AETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQM 177 T S G ++ PY K L LGV++ ++ K FS ++ + + Sbjct: 143 LNTKQ--SCLYFRGYEYKEPYFKNILATLGVTVNTLHIGDYKVAGESFSHDKMTEEKKES 200 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQEEVWQ 235 + ++ ++ + F+ LV E R + T + G + +AK++GLID + EE+ Sbjct: 201 LVNIKETLFQNFINLVKEKRKVDI--TNEILSGDLIFANSEKAKELGLIDGLSTYEEIGV 258 Query: 236 SLYALGVDQSIRKIKDWNPPKN 257 VD + I + KN Sbjct: 259 DYDEDTVDF-VEYISAYKRKKN 279 >gi|15604263|ref|NP_220779.1| protease SohB [Rickettsia prowazekii str. Madrid E] gi|3860955|emb|CAA14855.1| POSSIBLE PROTEASE SOHB (sohB) [Rickettsia prowazekii] Length = 308 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S D+ VA + + G I + L E IE+ + AL + ++SPG Sbjct: 34 FASVFGDSKEVVAVLRLSGVIGKVSTMQSGLTLESLNELIEKTFKIKKLKALCLIINSPG 93 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + V + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 94 GSPVQSELIAKRIRDLAKENKIKVYSFIEDMAASGGYWLACSGDQIYALPSSVIGSIGVV 153 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + KA PF +N +++++D+ Y FV V Sbjct: 154 SSGFGFHEAINKLGIERRVYTEGKNKAVLDPFKPINKDDLKIIKDLQKQVYEHFVEYVKN 213 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + +L +G W G A GLID +G V + + + + Sbjct: 214 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVIKEKFGDNIKF------QYLC 267 Query: 255 PKNYWFCDLKNLSISSLLEDTI 276 K W + L+ED + Sbjct: 268 AKQPWLKKKLGMRSKILIEDLV 289 >gi|254486961|ref|ZP_05100166.1| peptidase S49 [Roseobacter sp. GAI101] gi|214043830|gb|EEB84468.1| peptidase S49 [Roseobacter sp. GAI101] Length = 265 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 9/216 (4%) Query: 36 PHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P VA I + G I + + I++ A+ + +SSPGGS I Sbjct: 12 PTVAVIRLSGVIGGRARGGLNDGGIGPAIDKAFSRGKPVAVALEISSPGGSPVQSSLIGA 71 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ + K PVI V ++AAS GY ++ A++ + A +S+VGSIGV+ + Sbjct: 72 RIRRLADEKKIPVIAFVEDVAASGGYWLAAAADEVYADPSSVVGSIGVISSSFGASELIS 131 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + G+ + + K+ PF P+ V+ ++ +++ + F+ V R + Sbjct: 132 RHGIERRVYTAGQSKSMLDPFRPEKPEDVERLKHILNDIHTNFIDHVKARRGDKLAPDVD 191 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G IW A ++GLID +G + + V Sbjct: 192 LFTGEIWLAKRAAELGLIDGIGHLRPFLKERFGDKV 227 >gi|154623593|dbj|BAF74800.1| protease IV homologue [Enterococcus faecium] Length = 344 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 14/250 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSP 76 H ++ + ++++ G I D+ Q + ++++I D + +++ ++SP Sbjct: 57 HEGASNKKIVKLSVNGVIADTGESNLFSREQYTHQNFLTQLKKIQEDTALNGVLLEVNSP 116 Query: 77 GGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GG Y I + + +K P+ T + AAS GY IS + I A E + GSIGV+ Sbjct: 117 GGGIYESAEIAKEMANIKKLDIPIYTALKNTAASGGYYISAGPDKISATEETTTGSIGVI 176 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 L+ LGV+ + S +K P + + + +++Q+ V S+Y FV +V++ Sbjct: 177 ISGLNYSGLLENLGVTDATYTSRALKDMMPPQHKPSEEENKVIQEFVMSAYDRFVNVVAK 236 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 RN+ + L+DGRI+ G +A + GL+D +G E+ SL I+ N Sbjct: 237 GRNMDTNAVKELADGRIYDGNQAVENGLVDQIGYSEDALDSLKKEKKLTDATVIEYKNDT 296 Query: 256 KNYWFCDLKN 265 + L N Sbjct: 297 TGFASSWLGN 306 >gi|330798433|ref|XP_003287257.1| hypothetical protein DICPUDRAFT_78124 [Dictyostelium purpureum] gi|325082717|gb|EGC36190.1| hypothetical protein DICPUDRAFT_78124 [Dictyostelium purpureum] Length = 639 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 20/259 (7%) Query: 32 EDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPG 77 + N +A I G I S L+ I +D A+I+ ++S G Sbjct: 312 KKNKNLIALINCEGTIHQGAGKTKFNGGPSIGSDSLVLAIRSAVQDKDVKAIILRVNSGG 371 Query: 78 GSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GS A + + I+ K K ++ + AS GY I+C ++ I+A +L GSIGVL Sbjct: 372 GSYIASDLVHHEIEAAKKAGKKIVVSMGTYCASGGYFIACNADKIIALGATLTGSIGVLT 431 Query: 137 QYPYVKPFLDKLGVSIKSVK-----SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 ++P K+GV+ ++ + S N K + + + +D Y F Sbjct: 432 AKFNLQPMWKKIGVTFDDLRLNPDGTKDNATYFSSLHNYNEKQLSDVNNYLDFIYEDFTS 491 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 VS+ R + D+ ++ GR+WTG++A GL+D +GG +E ++ L S Sbjct: 492 KVSKGRRLTRDQVEEIARGRVWTGSQALDNGLVDKIGGIKEAIEAAKELCSMPSTSTPYV 551 Query: 252 WNPPKNYWFCDLKNLSISS 270 PK L + SS Sbjct: 552 VTYPKENIVQALLSQPNSS 570 Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 14/200 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++++E +E+ S D LIV L GG S + A+Q K + Sbjct: 89 KDILESLEKASTDKKIIGLIVKL---GGENQLSLSNIQEFRNAVQAFKKSGKRAVVFTDS 145 Query: 107 ---AASA--GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 S Y ++ A + + V I + + +VK L+KLGV ++ K Sbjct: 146 FTEVGSGIARYYLASAFTDVYMSPAGTVNLINSQYDFAFVKGTLEKLGVVPDALTRKEYK 205 Query: 162 AEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 + + ++ + M + S Y + +S+ R + D+ L + ++ +A Sbjct: 206 SALNSLINEKLTEAEKESMNAIFKSLYDQIILDISKDRGLTVDQVNGLFETGPFSADKAL 265 Query: 220 KVGLIDVVGGQEEVWQSLYA 239 LID +EV+ + Y Sbjct: 266 VNKLIDATLYSDEVYTTTYE 285 >gi|125583549|gb|EAZ24480.1| hypothetical protein OsJ_08238 [Oryza sativa Japonica Group] Length = 684 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ ++ +A I G I +++LIE+I + + A+I+ + Sbjct: 372 WTLGLQGGGEQIAVIRASGSITRTRSPLSVPSSGIIAEQLIEKIRTVRESEKYKAVILRI 431 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + + KPV+ + ++AAS GY ++ A+ +IVA + +L GSIG Sbjct: 432 DSPGGDALASDLMWREIRLLADTKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSIG 491 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ ++ +++ + + + + + P ++ + ++Y F Sbjct: 492 VVTGKFILQKLYERIDFNKEIISKGRYAELNAADQRPLRPDEAELFEKSAQNAYALFRDK 551 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + SR++ D+ ++ GR+W+G +A GL+D +GG + RK++ Sbjct: 552 AAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSLGGFSQALAIAKQKANIPHDRKVQLV 611 Query: 253 N-PPKNYWFCDLKNLSISSLL 272 + ++ + SSLL Sbjct: 612 EISKPSPTLPEILSGIGSSLL 632 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 87/235 (37%), Gaps = 31/235 (13%) Query: 43 IRGQIEDS-----------QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFR 88 +RG+I D ++ E + + D + + + + G + I R Sbjct: 129 LRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIEPLRCGWGKV---DEIRR 185 Query: 89 AIQKVKNR-----------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I K K V+ + + Y ++CA + A ++ V G+ Q Sbjct: 186 HIVDFKKSDDEQVLHDFVGKFVVGYMP-VCGEKEYYLACACGELYAPPSAYVALFGLTVQ 244 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 +++ L+K+G+ + + K+ ++ + +M+ ++D+ Y ++ +S Sbjct: 245 QTFLRGVLEKVGIEPEIQRIGRYKSAGDQLARKSMSNEVREMLATLLDNIYGNWLDTISS 304 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 ++ + ++ A K+ G I + +EV L + + ++ Sbjct: 305 KHGKKKEEIEEFINSGVYQVARLKEEGWITDLLYDDEVMAMLKERVAQKDKKSLR 359 >gi|146311850|ref|YP_001176924.1| putative periplasmic protease [Enterobacter sp. 638] gi|145318726|gb|ABP60873.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Enterobacter sp. 638] Length = 347 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 12/213 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 E P V + +G ++ + E+ + D +++ L SPGG + Sbjct: 95 EVTKPRVYVLDFKGSMDAHEVSSLREEVTAVLAVAKSQDQ---VVLRLESPGGVVHGYGL 151 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q++++++ P+ V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P F Sbjct: 152 AASQLQRLRDKQIPLTVAVDKVAASGGYMMACVADKIVAAPFAILGSIGVVAQIPNFNRF 211 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 212 LKNKEIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVHRMR--PSLDI 269 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A++ GL+D VG +++ SL Sbjct: 270 DQVATGEHWYGIQAQEKGLVDEVGTSDDLLLSL 302 >gi|115448437|ref|NP_001047998.1| Os02g0728100 [Oryza sativa Japonica Group] gi|46390611|dbj|BAD16095.1| putative protease IV [Oryza sativa Japonica Group] gi|113537529|dbj|BAF09912.1| Os02g0728100 [Oryza sativa Japonica Group] Length = 674 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ ++ +A I G I +++LIE+I + + A+I+ + Sbjct: 362 WTLGLQGGGEQIAVIRASGSITRTRSPLSVPSSGIIAEQLIEKIRTVRESEKYKAVILRI 421 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + + KPV+ + ++AAS GY ++ A+ +IVA + +L GSIG Sbjct: 422 DSPGGDALASDLMWREIRLLADTKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSIG 481 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ ++ +++ + + + + + P ++ + ++Y F Sbjct: 482 VVTGKFILQKLYERIDFNKEIISKGRYAELNAADQRPLRPDEAELFEKSAQNAYALFRDK 541 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + SR++ D+ ++ GR+W+G +A GL+D +GG + RK++ Sbjct: 542 AAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSLGGFSQALAIAKQKANIPHDRKVQLV 601 Query: 253 N-PPKNYWFCDLKNLSISSLL 272 + ++ + SSLL Sbjct: 602 EISKPSPTLPEILSGIGSSLL 622 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 84/224 (37%), Gaps = 19/224 (8%) Query: 43 IRGQIEDS-----------QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFR 88 +RG+I D ++ E + + D + + + + G + I R Sbjct: 129 LRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIEPLRCGWGKV---DEIRR 185 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I K + + Y ++CA + A ++ V G+ Q +++ L+K+ Sbjct: 186 HIVDFKKSGKFVVGYMPVCGEKEYYLACACGELYAPPSAYVALFGLTVQQTFLRGVLEKV 245 Query: 149 GVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 G+ + + K+ ++ + +M+ ++D+ Y ++ +S ++ Sbjct: 246 GIEPEIQRIGRYKSAGDQLARKSMSNEVREMLATLLDNIYGNWLDTISSKHGKKKEEIEE 305 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + ++ A K+ G I + +EV L + + ++ Sbjct: 306 FINSGVYQVARLKEEGWITDLLYDDEVMAMLKERVAQKDKKSLR 349 >gi|125540982|gb|EAY87377.1| hypothetical protein OsI_08780 [Oryza sativa Indica Group] Length = 684 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ ++ +A I G I +++LIE+I + + A+I+ + Sbjct: 372 WTLGLQGGGEQIAVIRASGSITRTRSPLSVPSSGIIAEQLIEKIRTVRESEKYKAVILRI 431 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + + KPV+ + ++AAS GY ++ A+ +IVA + +L GSIG Sbjct: 432 DSPGGDALASDLMWREIRLLADTKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSIG 491 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ ++ +++ + + + + + P ++ + ++Y F Sbjct: 492 VVTGKFILQKLYERIDFNKEIISKGRYAELNAADQRPLRPDEAELFEKSAQNAYALFRDK 551 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + SR++ D+ ++ GR+W+G +A GL+D +GG + RK++ Sbjct: 552 AAMSRSMNVDQMETVAQGRVWSGQDAASRGLVDSLGGFSQALAIAKQKANIPHDRKVQLV 611 Query: 253 N-PPKNYWFCDLKNLSISSLL 272 + ++ + SSLL Sbjct: 612 EISKPSPTLPEILSGIGSSLL 632 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 87/235 (37%), Gaps = 31/235 (13%) Query: 43 IRGQIEDS-----------QELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFR 88 +RG+I D ++ E + + D + + + + G + I R Sbjct: 129 LRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIEPLRCGWGKV---DEIRR 185 Query: 89 AIQKVKNR-----------KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I K K V+ + + Y ++CA + A ++ V G+ Q Sbjct: 186 HIVDFKKSDDEQVLHDFVGKFVVGYMP-VCGEKEYYLACACGELYAPPSAYVALFGLTVQ 244 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 +++ L+K+G+ + + K+ ++ + +M+ ++D+ Y ++ +S Sbjct: 245 QTFLRGVLEKVGIEPEIQRIGRYKSAGDQLARKSMSNEVREMLATLLDNIYGNWLDTISS 304 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 ++ + ++ A K+ G I + +EV L + + ++ Sbjct: 305 KHGKKKEEIEEFINSGVYQVARLKEEGWITDLLYDDEVMAMLKERVGQKDKKSLR 359 >gi|259908332|ref|YP_002648688.1| putative periplasmic protease [Erwinia pyrifoliae Ep1/96] gi|224963954|emb|CAX55459.1| Peptidase family U7 protein [Erwinia pyrifoliae Ep1/96] gi|283478271|emb|CAY74187.1| putative protease [Erwinia pyrifoliae DSM 12163] Length = 349 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 100/210 (47%), Gaps = 10/210 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEA 85 V + I +G + + + + ++ + +++ L SPGG + Sbjct: 96 VSKGKSTLYVIDFKGSMGAGE--VSSLREEVSAVMAVAEKGDEVLLRLESPGGVVHGYGL 153 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q+++++ P+ V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 154 AASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPNFNRL 213 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 214 LKRNEIDVELHTAGEYKRTLTLFGENTEQGREKFREDLNETHQLFKQFVHQMR--PTLDI 271 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A + GL+D +G +++ Sbjct: 272 DSVATGEHWYGQQALEKGLVDAIGTSDDLI 301 >gi|156742495|ref|YP_001432624.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] gi|156233823|gb|ABU58606.1| signal peptide peptidase SppA, 36K type [Roseiflexus castenholzii DSM 13941] Length = 561 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 5/245 (2%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 I GQI S+ +++ + + R+ A+I+ ++SPGGSA+ E I+R ++++ RKPV+ Sbjct: 311 IGGQIAGSESIVQALRQAERNPRLAAVILYVNSPGGSAFDSELIWREVRRLDRRKPVVAV 370 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++AAS GY ++ + I+A ++ GSIGVL P + + + GV+ ++ A Sbjct: 371 MGDVAASGGYYVASGARTILAQRGTITGSIGVLIVRPVIDGLVKRAGVNTVAIGRGANSA 430 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + + ++ ++D SY F + V E R++ + L+ GR+W G EA + Sbjct: 431 FFISDAP-TEQERAAVRALIDDSYTVFKQRVMEGRSMSEEALEPLAGGRVWMGGEAHESH 489 Query: 223 LIDVVGGQEEVW---QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLM 279 LID VGG E Q L L DQ+ + + S L + + L+ Sbjct: 490 LIDDVGGMPEALLKAQELAGLPRDQT-APLVLIGGGRGRLAPQTFPEEPSKTLREALALL 548 Query: 280 KQTKV 284 +Q + Sbjct: 549 RQPLI 553 Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 99/210 (47%), Gaps = 12/210 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG----EAIFRAIQKVKNRKPVITEVHEMA 107 EL R E ++ D +++ + G+ G + + + I++ + + + Sbjct: 64 ELRRRFEWLASDPQVKGVVLDI----GTLTCGWATIQNLDQDIRRFREQGKLAVARITNP 119 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + Y+ +CA+++IVA SL+ G+ + ++K L K+ VS++ SP K Sbjct: 120 DTKTYVAACAADLIVAPPVSLLTVTGLYAEVRFLKDALAKVDVSVEVTAVSPYKTAGDSL 179 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 SE++P+ + ++ ++D Y V ++ +R+ D+ L D W+ A++ GLID Sbjct: 180 ACSEMSPENREQIERLLDQRYALIVETIANARHKTVDEVCSLIDTAPWSARRAQEAGLID 239 Query: 226 VVGGQEEVWQSLYAL--GVDQSIRKIKDWN 253 V ++E+ L + + +I +W+ Sbjct: 240 AVLYEDELPAFLASRTGASPAKLPEIAEWS 269 >gi|121595589|ref|YP_987485.1| peptidase S49 [Acidovorax sp. JS42] gi|120607669|gb|ABM43409.1| peptidase S49 [Acidovorax sp. JS42] Length = 347 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 22/297 (7%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIE 58 + +V+L+ + + ++PH A + ++G+I ++ ++ + Sbjct: 63 WRNFWRLAWVLLAGAVIWAALSREMTATSKSTPHTAVVDVKGEIAAGAEASAEFVVAAMR 122 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISC 116 D + A+++ ++SPGGS I I ++K + KPV V E ASA Y I+ Sbjct: 123 SAFEDAGSQAVVLLINSPGGSPVQAGIINDEIVRLKAKYNKPVYAVVEETCASAAYYIAA 182 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL ++KLGV + + + K PFS Sbjct: 183 AADGIFVDKASIVGSIGVLMDGFGFTGAMEKLGVERRLLTAGENKGFLDPFSPQTETQRA 242 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F+ +V + R T G WTG +A ++GL D +G + V + Sbjct: 243 YAQAMLDQIHQQFIGVVKQGRGDRLKVTPETFSGLFWTGQQAVEMGLADQLGNLDYVARE 302 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + + D+ N K + + V+GL A+ P Sbjct: 303 VV------KAEDVIDYTRRDNVAERLAKKFGAA---------VGMGAVKGLAALQLP 344 >gi|82699311|ref|YP_413885.1| Clp protease [Brucella melitensis biovar Abortus 2308] gi|237814870|ref|ZP_04593868.1| Na+/H+ antiporter NhaA [Brucella abortus str. 2308 A] gi|82615412|emb|CAJ10381.1| Clp protease:Peptidase U7:Na+/H+ antiporter NhaA [Brucella melitensis biovar Abortus 2308] gi|237789707|gb|EEP63917.1| Na+/H+ antiporter NhaA [Brucella abortus str. 2308 A] Length = 763 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 493 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 552 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 553 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 612 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 613 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 672 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 673 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 727 Query: 266 LSISS 270 + + S Sbjct: 728 IGMDS 732 >gi|326386909|ref|ZP_08208523.1| signal peptide peptidase SppA, 67K type [Novosphingobium nitrogenifigens DSM 19370] gi|326208589|gb|EGD59392.1| signal peptide peptidase SppA, 67K type [Novosphingobium nitrogenifigens DSM 19370] Length = 650 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 10/225 (4%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 + +A + + G I D + I+R + +++ + SPGGS Sbjct: 306 AQKGGKAIAVVNVEGAIVDGNAGPGVAGGDRIAALIDRATASGDYAGMVLRVDSPGGSVT 365 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 E I A+++ K PV + +AAS GY +S ++ I A ++ GSIG+ P Sbjct: 366 GAERIRAAVERFKASGLPVAVSMGNLAASGGYWVSTPADRIFAEPATITGSIGIFAVIPS 425 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + L K GV+ ++++P+ +PS +P+ ++Q +D+ YH FV LVS SR+ Sbjct: 426 FEDSLAKFGVTTDGLRTTPLSGQPSILGGFSPEMEAVLQTEIDAGYHRFVGLVSASRHKS 485 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y ++ GR+W G A+++GL+D G + + Sbjct: 486 YADVDRIAQGRVWDGGTARQIGLVDEFGNLDNALNWVAGKAGATK 530 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 21/195 (10%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSA-YAGEAIFRAIQKVK-NRKPVI---TEVH 104 + +L+ IE + D A+ + L GG+ + A+ KV+ KPV+ Sbjct: 81 AHDLVRAIEAAATDTRIRAVTLDLEGFGGAGQVTLSRLGEALDKVRGAGKPVLVRAVLYD 140 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + A ++ ++ I V G + LD+L V K K+ Sbjct: 141 DDAL----QLAAHASEIWVDPLGGVMVRGPGGTLLFYHGLLDRLKVKAHVFKVGTYKSAV 196 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGA----- 216 P+ ++P+A + V + +H ++ V ++R P +++ + W A Sbjct: 197 EPYIRDSLSPEAREAETAVYTAVWHDWLAEVKKAR--PRANLALVTSDPVKWLAASDGNA 254 Query: 217 --EAKKVGLIDVVGG 229 AK GL+D +G Sbjct: 255 AEAAKAAGLVDRIGD 269 >gi|288549698|ref|ZP_05967891.2| SohB protein, peptidase U7 family [Enterobacter cancerogenus ATCC 35316] gi|288317953|gb|EFC56891.1| SohB protein, peptidase U7 family [Enterobacter cancerogenus ATCC 35316] Length = 351 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 12/215 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P V + +G ++ + E+ + D ++V L SPGG + Sbjct: 99 DAGKPRVYVLDFKGSMDAHEVSSLREEVTAVLAVAKPQDQ---VVVRLESPGGVVHGYGL 155 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q+++ ++ P+ V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P F Sbjct: 156 AASQLQRLREKQIPLTVAVDKVAASGGYMMACVADKIVAAPFSIIGSIGVVAQIPNFNRF 215 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 216 LKNKEIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVHRMR--PTLDI 273 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A++ GL+D VG +++ +L Sbjct: 274 DSVATGEHWYGIQAQEKGLVDDVGTSDDLLLNLME 308 >gi|126730495|ref|ZP_01746306.1| peptidase, family S49 [Sagittula stellata E-37] gi|126709228|gb|EBA08283.1| peptidase, family S49 [Sagittula stellata E-37] Length = 265 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 10/233 (4%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P V+ + ++G I + +E+ R A+ + ++SPGGS Sbjct: 9 KSRPRVSVVRLQGAISVPARGNLSDRTAAALLEKAFR-SKPDAVALEINSPGGSPVQSSL 67 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ + PV V ++AAS GY I+ A++ I A +S++GSIGV+ Sbjct: 68 IGARIRRLSEQHNIPVYAFVEDVAASGGYWIASAADEIWADASSILGSIGVISSGFGAHV 127 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + G+ + + K+ PF + V + ++ + F+ + R Sbjct: 128 FLQRQGIERRVHTAGKSKSMMDPFRPETEEDVARLNRLLGQLHDTFINQIRARRGEKLAS 187 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 L G IW G A GL D +G V + + V + K P+ Sbjct: 188 NPDLFTGEIWVGQAAVDQGLADGIGHLVPVMKQRFGDKVRFKRYEAKRPFLPR 240 >gi|163750235|ref|ZP_02157477.1| sohB protein, peptidase U7 family [Shewanella benthica KT99] gi|161330091|gb|EDQ01075.1| sohB protein, peptidase U7 family [Shewanella benthica KT99] Length = 335 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 13/228 (5%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P V + +G I+ S+ E I I I+ D +IV++ S GG + Sbjct: 87 DPRVFVVDFKGSIDASEVASLREEISAILTIAETDD--EVIVNVESGGGMVHGYGLASSQ 144 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ + V ++AAS GY+++C +N I AA ++VGSIGV+ Q P L K Sbjct: 145 LDRLRQAGIHLTICVDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQIPNFNKLLKKH 204 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + K + F E + Q ++ ++ F + +++ R P ++ Sbjct: 205 DIDYEQHTAGDFKRTLTLFGENTDEGRAKFQAELEDTHVLFKQFIAKYR--PELDLDKVA 262 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G W G +A K+GL+D + ++V L ++++ K++ K Sbjct: 263 TGEHWYGQQAIKLGLVDAISTSDDVV---MKLARERTVIKVRYQLKKK 307 >gi|152978941|ref|YP_001344570.1| putative periplasmic protease [Actinobacillus succinogenes 130Z] gi|150840664|gb|ABR74635.1| Peptidase S49 domain protein [Actinobacillus succinogenes 130Z] Length = 353 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 9/214 (4%) Query: 32 EDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +++ P + + +G I+ S +E I + +++ A +++ L SPGG + Sbjct: 100 QEHKPTLYVLNFKGDIQASATTALREEITALLSVAK-PEADEVLLRLESPGGLVHGYGLA 158 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + V ++AAS GY+++C ++ IVAA ++VGS+GV+ Q P + L Sbjct: 159 ASQLARLKQAGIKLTVAVDKVAASGGYMMACVADKIVAAPFAIVGSVGVVAQVPNIHRLL 218 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + E K Q Q ++ ++ F R V+E+R P + Sbjct: 219 KKHDVDVDVMTAGEFKRTVTILGENTEKGKQKFQQELEETHELFKRFVAENR--PQLEVE 276 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A +GLID + ++V Sbjct: 277 KIATGEHWFGQQALALGLIDKIATSDDVILQAMK 310 >gi|209963904|ref|YP_002296819.1| signal peptide peptidase SppA, 67K type [Rhodospirillum centenum SW] gi|209957370|gb|ACI98006.1| signal peptide peptidase SppA, 67K type [Rhodospirillum centenum SW] Length = 595 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 19/255 (7%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIE---------------DSQELIERIERISRDDSAT 67 Y + + +P VA + G I + ++ + I + D S Sbjct: 283 AYRDAAEETDAQAPVVALVVGEGGIARGESDDNPVTGSEGFGATDVAKAINAAAADSSVK 342 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAET 126 A++ ++SPGGSA E + RA+++ + + KPVI + ++AAS GY +S ++ IVA Sbjct: 343 AILFRVNSPGGSAVGSEVVRRAVKRAREQGKPVIVSMGDLAASGGYWVSMDADRIVAQPG 402 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + GSIGVL D LGV+ + P + ++D Y Sbjct: 403 TFTGSIGVLGGKLVTSGLTDMLGVNYGMTSRGRNATMWTTQQPYTPAELDRRAALLDDIY 462 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVD 243 F VS RN+P +K ++ GR+WTG +AK++GL+D +GG + + L D Sbjct: 463 AQFTTGVSAGRNLPLEKVQEVAKGRVWTGRQAKEIGLVDALGGYATALSLAREVMGLSAD 522 Query: 244 QSIRKIKDWNPPKNY 258 +R P + Sbjct: 523 APVRVALFPKPKSQF 537 Score = 98.7 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 7/201 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV-ITEVHEMA-AS 109 +++ ++R +RD LI + G + + A+++ + + S Sbjct: 73 DVVATLDRAARDPRVKGLIARAGTAEGGVATLQELRDAVERFRAAGKFALVHAETFGEFS 132 Query: 110 AG---YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 G Y ++ A + I VG G+L + P ++ L+KL + + K K Sbjct: 133 PGMQSYYLATAFDEIWLQPVGTVGITGILSERPLLRGTLEKLKIEPQIDKRYEYKTAAEQ 192 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 F E P +M + ++ Y V ++ R +P D D EA ++ L+ Sbjct: 193 FMEREPTPANEEMTESLIGDLYEQMVAGIAADRKLPIDAVNAAVDRAPLLDKEALELKLV 252 Query: 225 DVVGGQEEVWQSLYALGVDQS 245 D +G +E+ ++ Sbjct: 253 DRLGYYDELVETAKERTRSDK 273 >gi|296158253|ref|ZP_06841085.1| peptidase S49 [Burkholderia sp. Ch1-1] gi|295891589|gb|EFG71375.1| peptidase S49 [Burkholderia sp. Ch1-1] Length = 334 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 10/243 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFS--WSSHVEDNSPHVARIAIRGQI-----EDSQELIERIER 59 +I R+V L ++ L + V H A +A+ G+I +++++ +E Sbjct: 50 RIFFRFVFLLILLLAIWAAIDFSGDKVAATGRHTAMVALDGEISADTNANAEDISTALES 109 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D +I+ +SPGGS I+ I++++ + P + V +M AS GY + Sbjct: 110 AFDDAGTAGVILRCNSPGGSPVQAGIIYNEIRRLRAKYPSIPLYVVVGDMCASGGYYAAA 169 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLG+ + S K PFS PK + Sbjct: 170 AADKIYVDKASIVGSIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFFDPFSPETPKMDE 229 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 QD++D + F+ V E R +T + G WTG ++ ++GL D G + V + Sbjct: 230 HAQDMLDQIHAQFIDAVREGRGKRLHETPDMFSGLFWTGQKSVELGLADGFGDADYVARD 289 Query: 237 LYA 239 L+ Sbjct: 290 LFK 292 >gi|296537377|ref|ZP_06899233.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] gi|296262298|gb|EFH09067.1| signal peptide peptidase SppA [Roseomonas cervicalis ATCC 49957] Length = 271 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 19/251 (7%) Query: 33 DNSPHVARIAIRGQIE-----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 D P VA + + G I + + +ER +++ ++SPGGS Sbjct: 13 DRGPRVALVRLSGLIAARGGGIGPAGLSLEGVAPVLERAFALKRLAGVVLVINSPGGSPV 72 Query: 82 AGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 I I+ + K PVI V + AAS GY ++CA++ IVA +S+VGSIGV+ Sbjct: 73 QSSLIAARIRALAEEKKVPVIACVEDAAASGGYWLACAADEIVADPSSIVGSIGVISASF 132 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 ++ KLGV + + K+ PF V P +++++ + + F V R Sbjct: 133 GLEELAAKLGVERRLTTAGGQKSFLDPFRPVEPWQQARLEELLSALHEEFKAWVRSRRAA 192 Query: 200 PYDK-TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 L +GR WTG EA +GLID +G + + + + + P + Sbjct: 193 HLAAPEEALFNGRFWTGREALPLGLIDRLGNAQSEIRRRFG-----EKTPVIPFGPKRPP 247 Query: 259 WFCDLKNLSIS 269 L +++ Sbjct: 248 LPMRLLRGAMA 258 >gi|148655954|ref|YP_001276159.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] gi|148568064|gb|ABQ90209.1| signal peptide peptidase SppA, 36K type [Roseiflexus sp. RS-1] Length = 571 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 29/275 (10%) Query: 38 VARIAIRGQIE-------------------DSQELIERIERISRDDSATALIVSLSSPGG 78 V I I G I S+ +I+ + + R+ A+++ ++SPGG Sbjct: 289 VGVITIEGTIAAGPSRQNPLPIPLIGELIAGSESIIQALRQAERNPRLAAVLLYINSPGG 348 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 SA+ + I+R ++++ RKPV+ + ++AAS GY ++ + I+A ++ GSIGVL Sbjct: 349 SAFDSDLIWREVRRLDRRKPVVAVMGDVAASGGYYVASGARTILAQPGAVTGSIGVLIIR 408 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P ++ L + GV+ ++ A + ++ ++D SY F + VS RN Sbjct: 409 PVIEGLLKRAGVNTVAIGRGANSAFFVSDAPA-EAERSAVRALIDDSYALFKQRVSTGRN 467 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKI-----K 250 IP L+ GR+W+G EA + GLID GG E Q L L D++ I + Sbjct: 468 IPEPALEPLAGGRVWSGREAYEYGLIDASGGVPEALLKAQELAGLPRDRTAPLILIGSGR 527 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 PP+++ D+ I+ L + + M Sbjct: 528 GRLPPQSFP-KDMMEGLITELRQPRVWAMLPFSED 561 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 6/220 (2%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 L R+E ++ D +++ +++ E++ + I++ + R + + Sbjct: 64 NLRHRLEWLASDPQVRGIVLDINTLTCGWATIESLHQEIRRFRERGKRVVARLTNPDTKT 123 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--E 169 Y+ +CA+++IVA +L+ G+ ++K L K+ +S++ SP K P + + Sbjct: 124 YVAACAADLIVAPPAALLNVTGLYTGVRFLKDALAKVDLSVEVTAVSPYKTAGDPLARPD 183 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++P+ + ++ ++D Y V ++ +R D+ L D W+ A++ GLID V Sbjct: 184 MSPENREQIERLLDLRYAAIVETIATARRKTPDEVRALIDTAPWSAQRAQEAGLIDAVLY 243 Query: 230 QEEVWQSLY----ALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++E+ L G S +I +W + + Sbjct: 244 EDELPAFLASQAGKDGGAGSEPQIVEWAQARRALRLPMLR 283 >gi|90420150|ref|ZP_01228058.1| putative peptidase, family S49 [Aurantimonas manganoxydans SI85-9A1] gi|90335484|gb|EAS49234.1| putative peptidase, family S49 [Aurantimonas manganoxydans SI85-9A1] Length = 291 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 16/271 (5%) Query: 38 VARIAIRGQIEDSQELIE----------RIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I + + + A A+ + ++SPGGS I+ Sbjct: 20 IPVVRLSGMISSGGTALRPSLSLASAAPLLAKAFAHKKAPAVAIVINSPGGSPVQSRLIY 79 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + K V+ V ++AAS GY+I+CA + I+A +S+VGSIGV+ + Sbjct: 80 QRIRDLAEEKDKQVLVFVEDVAASGGYMIACAGDEIIADPSSIVGSIGVVSGSFGFVEAI 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 KLG+ + + KA PF P+ V+ ++ + + F+ LV +SR Sbjct: 140 AKLGIERRVHTAGSNKATLDPFQPERPEDVEHLKSLQLEVHKTFIDLVKDSRGAKLADHD 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD--WNPPKNYWFCDL 263 L G W+G ++GL+D +G ++ + V + + K + P+ + Sbjct: 200 DLFTGLFWSGLRGLELGLVDRLGDLRGTLRARFGKKVKLELVQAKRTLFGRPQPGVHAGM 259 Query: 264 KNLSISSLLEDTI--PLMKQTKVQGLWAVWN 292 + + M + + LWA + Sbjct: 260 AAGDGMAAIGAGFAREAMGVAEERALWARFG 290 >gi|42563213|ref|NP_565077.2| SPPA; serine-type endopeptidase [Arabidopsis thaliana] gi|12325146|gb|AAG52522.1|AC016662_16 putative protease IV; 48713-44371 [Arabidopsis thaliana] gi|332197414|gb|AEE35535.1| signal peptide peptidase [Arabidopsis thaliana] Length = 677 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I +++LIE+I + A I+ + Sbjct: 365 WTLGLTGGRDQIAIIRAGGSISRVKGPLSTPGSAIIAEQLIEKIRSVRESKKYKAAIIRI 424 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A+N IVA +L GSIG Sbjct: 425 DSPGGDALASDLMWREIKLLAETKPVIASMSDVAASGGYYMAMAANAIVAENLTLTGSIG 484 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + +++ + + P+ ++ + +Y F Sbjct: 485 VVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPLKPEEAELFEKSAQHAYQLFRDK 544 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + SR++P DK ++ GR+WTG +A GLID VGG +K+ Sbjct: 545 AALSRSMPVDKMEEVAQGRVWTGKDAHSRGLIDAVGGLSRAIAIAKQKANIPLNKKVTLV 604 Query: 253 NPPK-NYWFCDLKNLSISSLL 272 + + D+ + SS++ Sbjct: 605 ELSRPSTSLPDILSGIGSSVI 625 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 20/257 (7%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----------QELIERIERISRDD 64 V + F++ V + +RGQI D +L E + + D Sbjct: 106 IFVVKFRMLFAY-PWQRVRKGSVLTMTLRGQISDQLKSRFNSGLSLPQLSENFVKAAYDP 164 Query: 65 SATALIVSLS--SPG-GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + + + S G G E I R I K I + Y + CA N + Sbjct: 165 RIAGVYLHIDPLSCGWGKV---EEIRRHILNFKKSGKFIVGYISICGLKEYYLGCACNEL 221 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQ 179 A ++ G+ Q ++ +K+G+ + + K+ S ++ + +M+ Sbjct: 222 FAPPSAYSFLYGLTVQASFLGGVFEKVGIEPQVQRIGKYKSAGDQLSRKSISEENYEMLS 281 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D+ Y ++ VS++ + + ++ + K+ GLI + +EV L Sbjct: 282 VLLDNIYSNWLDGVSDATGKKREDVENFINQGVYEIEKLKEAGLIKDIRYDDEVITMLKE 341 Query: 240 LGVDQSIRKIKDWNPPK 256 + +K+ + K Sbjct: 342 RLGVEKDKKLPTVDYKK 358 >gi|85059384|ref|YP_455086.1| putative periplasmic protease [Sodalis glossinidius str. 'morsitans'] gi|84779904|dbj|BAE74681.1| putative protease [Sodalis glossinidius str. 'morsitans'] Length = 348 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 11/254 (4%) Query: 38 VARIAIRGQIEDSQ--ELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + + G ++ + L E I + S +++ L SPGG + +Q+++ Sbjct: 102 LYVLDFTGSMDAGEVSSLREEITAVLSVAKSGDEVLLRLESPGGVVHGYGLAASQLQRLR 161 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + P+ V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P L + + ++ Sbjct: 162 EKGIPLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPNFHRLLKRNDIDME 221 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + K + F E +P + Q ++ ++ F V R P ++ G W Sbjct: 222 LHTAGAYKRTLTLFGENSPAGREKFQQELNETHQLFKSFVQRMR--PTLDVDTVATGEHW 279 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 G +A+ +GL+D +G +++ A S+R ++ PK W + + SL + Sbjct: 280 YGEQAQHLGLVDAIGTSDDLLIEQLARHEVISVR----FSRPK-CWMSRFTDSAALSLEQ 334 Query: 274 DTIPLMKQTKVQGL 287 + ++ + L Sbjct: 335 RLMRYWQRAQKPLL 348 >gi|319784754|ref|YP_004144230.1| peptidase S49 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170642|gb|ADV14180.1| peptidase S49 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 287 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 14/269 (5%) Query: 37 HVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + I + G I IE+ D A A+ +S++SPGGS I Sbjct: 19 TIPVIRLHGTIMAGGGQFRPSLSLASTAGLIEKAFSYD-APAVAISINSPGGSPVQSRLI 77 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F+ I+ + K V+ V ++AAS GY+I+ A + I A +S+VGSIGV+ Sbjct: 78 FKRIRDLATEKNRKVLVFVEDVAASGGYMIAVAGDEIFADPSSIVGSIGVVSASFGFPEL 137 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + K+G+ + + KA PF + V+ ++ + + F+ LV E R Sbjct: 138 MKKIGIERRVHTAGQNKAVLDPFKPEKKEDVERLKALQLEVHGTFIDLVKERRGSKLKDD 197 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G WTG + ++GL+D +G V ++ + + + F Sbjct: 198 PDLFTGLFWTGIKGLELGLVDALGDMRTVLKTRFGAKTQLRLITAPRGFLSRFGLFGSSG 257 Query: 265 NLSISSL-LEDTIPLMKQTKVQGLWAVWN 292 S + L+ + + LW+ + Sbjct: 258 GFSAPDIAAAAASGLIDAAEERALWSRFG 286 >gi|6690270|gb|AAF24059.1|AF114385_1 putative protease SppA [Arabidopsis thaliana] Length = 680 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I +++LIE+I + A I+ + Sbjct: 368 WTLGLTGGRDQIAIIRAGGSISRVKGPLSTPGSAIIAEQLIEKIRSVRESKKYKAAIIRI 427 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A+N IVA +L GSIG Sbjct: 428 DSPGGDALASDLMWREIKLLAETKPVIASMSDVAASGGYYMAMAANAIVAENLTLTGSIG 487 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + +++ + + P+ ++ + +Y F Sbjct: 488 VVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPLKPEEAELFEKSAQHAYQLFRDK 547 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + SR++P DK ++ GR+WTG +A GLID VGG +K+ Sbjct: 548 AALSRSMPVDKMEEVAQGRVWTGKDAHSRGLIDAVGGLSRAIAIAKQKANIPLNKKVTLV 607 Query: 253 NPPK-NYWFCDLKNLSISSLL 272 + + D+ + SS++ Sbjct: 608 ELSRPSTSLPDILSGIGSSVI 628 Score = 72.5 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 89/260 (34%), Gaps = 23/260 (8%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----------QELIERIERISRDD 64 V + F++ V + +RGQI D +L E + + D Sbjct: 106 IFVVKFRMLFAY-PWQRVRKGSVLTMTLRGQISDQLKSRFNSGLSLPQLSENFVKAAYDP 164 Query: 65 SATALIVSLS--SPG-GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + + + S G G E I R I K I + Y + CA N + Sbjct: 165 RIAGVYLHIDPLSCGWGKV---EEIRRHILNFKKSGKFIVGYISICGLKEYYLGCACNEL 221 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQ 179 A ++ G+ Q ++ +K+G+ + + K+ S ++ + +M+ Sbjct: 222 FAPPSAYSFLYGLTVQASFLGGVFEKVGIEPQVQRIGKYKSAGDQLSRKSISEENYEMLS 281 Query: 180 DVVDSSY---HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++D+ Y V + + ++ + K+ GLI + +EV Sbjct: 282 VLLDNIYSIGWMVVSDAQNYAGKKREDVENFINQGVYEIEKLKEAGLIKDIRYDDEVITM 341 Query: 237 LYALGVDQSIRKIKDWNPPK 256 L + +K+ + K Sbjct: 342 LKERLGVEKDKKLPTVDYKK 361 >gi|241889101|ref|ZP_04776405.1| putative signal peptide peptidase SppA [Gemella haemolysans ATCC 10379] gi|241864350|gb|EER68728.1| putative signal peptide peptidase SppA [Gemella haemolysans ATCC 10379] Length = 325 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 9/226 (3%) Query: 32 EDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 D+S + +I+I G+I ++ +I+ + + A+++S++SPGG Y Sbjct: 61 GDSSEVIQKISIDGEINAEMTNTYSRGSVLNQIKEAKGNPNVKAILLSVNSPGGGVYETA 120 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ A++ + K V + + AAS GY +S + I + GS+GV+ Y + F Sbjct: 121 ELYNALKN--SGKDVYVSMKKTAASGGYYVSTPAKKIFVNTETTTGSLGVIMSYVSAQKF 178 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ G+ ++++S KA ++ +++Q+ +Y FV+ ++E R++ D+ Sbjct: 179 LNDHGIKQETIRSGEQKAVGGLTEDLPESTRKILQEQNKEAYERFVKAIAEGRHLSEDEV 238 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 L+DGR +TG +A L D VG ++E+ + + I+ Sbjct: 239 KKLADGRTYTGTQAVANKLADKVGTEDELIDLIKEEKGLSNPTVIE 284 >gi|260914078|ref|ZP_05920551.1| S49 family peptidase [Pasteurella dagmatis ATCC 43325] gi|260631711|gb|EEX49889.1| S49 family peptidase [Pasteurella dagmatis ATCC 43325] Length = 351 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 117/270 (43%), Gaps = 28/270 (10%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + PH+ + +G I S+ E I I +++ + +++ L SPGG + Sbjct: 95 GEFINERKPHLYVLNFKGDISASETTALREEISAIIGVAQPED--EVLLRLESPGGVVHG 152 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K + V ++AAS GY+++C ++ IVAA +++GS+GV+ Q P + Sbjct: 153 YGLAASQLARLKKHNIKLTIAVDKVAASGGYMMACVADKIVAAPFAILGSVGVVAQIPNI 212 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K V + + + K + E K Q Q ++ ++ F + V+++R P+ Sbjct: 213 HRLLKKHDVDVDVMTAGEYKRTVTLLGENTEKGKQKFQQELEETHDLFKQFVAQNR--PH 270 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ G W G +A ++ L+D + +++ S++ + K+ Sbjct: 271 LDVNKIATGEHWFGQQALELNLVDEIATSDDLILDAIKTKKVVSLK----YQTKKS---- 322 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 L I + + V G+ W Sbjct: 323 ----------LIQKIGMQAEESVDGVLLRW 342 >gi|319407549|emb|CBI81199.1| protease [Bartonella sp. 1-1C] Length = 282 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 18/278 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPG 77 S N+ + + ++G I S I R +++ A A+ + ++SPG Sbjct: 9 SRFFRSNTVQIPVVRLQGAIISSNSSISRTLSLARCASLLDKAFSYKKAPAVALIINSPG 68 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS IF+ I+ + N K V+T V ++AAS GY+I+CA + I + +S++GSIGV+ Sbjct: 69 GSPVQSRLIFQRIRDLANEKNKQVLTFVEDVAASGGYMIACAGDEIFSDPSSIIGSIGVV 128 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 L K+GV + + K PF V ++ + + F+ LV E Sbjct: 129 SASFGFPELLKKIGVERRVYTAGKNKVTLDPFQPEKKTDVDHLKSLQLEVHQTFIDLVKE 188 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + G W+G + ++GLID +G V + + + K++ +PP Sbjct: 189 RRMSKLSDDSNIFTGMFWSGKKGVELGLIDELGDIRSVIKKRFG-----NNAKLRLISPP 243 Query: 256 KNYWFCDLK-NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 K+ + +S + +M + + LW + Sbjct: 244 KSLLSSKVPLGISADTAYTAVDGVMMAAEERALWQRYG 281 >gi|209964969|ref|YP_002297884.1| proteinase SohB, putative [Rhodospirillum centenum SW] gi|209958435|gb|ACI99071.1| proteinase SohB, putative [Rhodospirillum centenum SW] Length = 291 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 19/274 (6%) Query: 36 PHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V+ + + G I +ER A+ + ++SPGGS I Sbjct: 19 PIVSVVRLSGIIGGVGGFRPGLTIAATAPLLERAFAPKDQVAVALIINSPGGSPVQSALI 78 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ + K PVI V ++AAS GY ++CA++ IVA +S+VGSIGV+ + Sbjct: 79 GGRIRALAEEKKLPVIAFVEDVAASGGYWLACAADEIVADPSSVVGSIGVVSRGFGFPEA 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 L +LG+ + S K PF + V+ ++ + + + F V R Sbjct: 139 LRRLGIERRVHTSGTNKNMLDPFQPERAEDVERLKSLQEEVHESFKDWVRRRRGPKLTVP 198 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD- 262 L G WTG +GL+D +G V + Y G + +R + Sbjct: 199 EADLFTGEFWTGTRGLTLGLVDRLGDARTVLRERY--GTEVKLRMVGQRRSLFQRLGGGE 256 Query: 263 --LKNLSISSLLEDTI--PLMKQTKVQGLWAVWN 292 L L S+ L I L+ + + LW + Sbjct: 257 SRLSGLPASADLGAGIAAGLLSAAEERALWQRYG 290 >gi|85373032|ref|YP_457094.1| periplasmic serine protease [Erythrobacter litoralis HTCC2594] gi|84786115|gb|ABC62297.1| periplasmic serine protease [Erythrobacter litoralis HTCC2594] Length = 626 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 13/270 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ--------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + + + + + G+I D + + I + + D LIV + SPGGS A Sbjct: 308 DTSGSAIGVVTVAGEIVDGEAGPGTAGGDRIAELLDAALSDDLAGLIVRVDSPGGSVLAS 367 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 EAI A+ + K + P+ + +AAS GY +S ++ I A ++ GSIG+ P + Sbjct: 368 EAIRDAVLRHKAKGIPIAVSMANVAASGGYWVSTPADRIFAEPETITGSIGIFAVIPTFE 427 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + GV+ V ++ + +P + P+ ++Q ++ Y F+ VSE+R +P + Sbjct: 428 NLAAEYGVNADGVATTSLSGQPDLIAGFTPEVDAILQSSIEDGYRDFLTRVSEARKLPME 487 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG----VDQSIRKIKDWNPPKNY 258 + + GR+W G A+++GL+D GG EE + A D +R + + P + Sbjct: 488 RVDAIGQGRVWDGGTARQIGLVDQYGGLEEALDWVAAQAELEEGDWHVRFLGNEQQPFDN 547 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 + S I M T+ Q L Sbjct: 548 LLRTMLLTDSESAPAGDIFGMVATRQQALL 577 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 7/154 (4%) Query: 49 DSQELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVK-NRKPVITEVHE 105 D+Q+L+ I+ + DD A+++ L+ GG + + I A+Q+ + KPV+T Sbjct: 80 DAQDLVHAIDAATGDDRIKAIVLDLTGFLGGGHVH-LQDIGEALQRARDAEKPVLTYGIG 138 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A +++ ++ + G Y FL+ L ++ + K K+ Sbjct: 139 YGDDA-MMLAAHASEVWLDPLGGAIIAGPGGNRLYFGQFLEDLNINARIYKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 PF S+++P+A + Q + + + + V ++R Sbjct: 198 PFDRSDMSPEARENAQALYGALWEEWQAKVKKAR 231 >gi|329768602|ref|ZP_08260088.1| hypothetical protein HMPREF0428_01785 [Gemella haemolysans M341] gi|328836476|gb|EGF86137.1| hypothetical protein HMPREF0428_01785 [Gemella haemolysans M341] Length = 327 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 9/226 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQ-------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 D+S + +I+I G+I ++ +I+ + + A+++S++SPGG Y Sbjct: 63 GDSSQVIQKISIEGEINSEMTNTYSRGSVLNQIKEAKGNPNVKAILLSVNSPGGGVYETA 122 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ A++ + K V + + AAS GY +S + I + GS+GV+ Y + F Sbjct: 123 ELYNALKN--SGKDVYVSMKKTAASGGYYVSTPAKKIFVNTETTTGSLGVIMSYVSAQKF 180 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ G+ ++V+S KA ++ +++Q+ +Y FV+ ++E R++ D+ Sbjct: 181 LNDHGIKQETVRSGDQKAVGGLTEDLPESTRKILQEQNKEAYERFVKAIAEGRHLSEDEV 240 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 L+DGR +TG +A L D +G ++E+ + + I+ Sbjct: 241 KKLADGRTYTGTQAVANKLADKIGTEDELIDLIKEEKGLSNPTVIE 286 >gi|312283239|dbj|BAJ34485.1| unnamed protein product [Thellungiella halophila] Length = 682 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I +++LIE+I + A I+ + Sbjct: 370 WTLGLSGGRDQIAIIRAGGSISRVKGPLSTPGSAIIAEQLIEKIRSVRESKKYKAAIIRI 429 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A+N IVA +L GSIG Sbjct: 430 DSPGGDALASDLMWREIKLLAESKPVIASMSDVAASGGYYMAMAANTIVAENLTLTGSIG 489 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + +++ + P+ ++ +Y F Sbjct: 490 VVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPFKPEEAELFGKSAQHAYQLFRDK 549 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + SR++P DK ++ GR+WTG +A GL+D +GG +K+ Sbjct: 550 AALSRSMPVDKMEEVAQGRVWTGKDAHSRGLVDALGGLSRAIAIAKKKANIPLHKKV 606 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 89/232 (38%), Gaps = 19/232 (8%) Query: 41 IAIRGQIEDS-----------QELIERIERISRDDSATALIVSLS--SPG-GSAYAGEAI 86 + +RGQI D ++ E + + + D + + + S G G E I Sbjct: 135 MTLRGQISDQLKSRFSSGLSLPQISENLVKAAYDPRIAGVYLHIEPLSCGWGKV---EEI 191 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R I K I + Y + CA N + A ++ G+ Q ++ + Sbjct: 192 RRHILDFKKSGKFIVGYINICGLKEYYLGCACNELYAPPSAYSFLYGLTVQASFLGGVFE 251 Query: 147 KLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+G+ + + K+ S ++ + +M+ ++D+ Y ++ VS+S + Sbjct: 252 KVGIEPQVQRIGKYKSAGDQLSRKNISEENYEMLSVLLDNIYANWLDGVSDSTGKQREDV 311 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + ++ + K+ GLI + +EV L + +K+ + K Sbjct: 312 ESFINQGVYEIEKLKEEGLIKDIRYDDEVISMLKERLGVEKDKKLPTVDYKK 363 >gi|239947249|ref|ZP_04699002.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921525|gb|EER21549.1| signal peptide peptidase SppA [Rickettsia endosymbiont of Ixodes scapularis] Length = 304 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 18/259 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGG 78 +S D+ +A + + G I + L E IE+ + AL + ++SPGG Sbjct: 31 ASVFGDSKEVIAVLRLSGVIGKVSTMQSGLTLESLNELIEKAFKIKKLKALCLIINSPGG 90 Query: 79 SAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S E I + I+ + + + + + +MAAS GY ++C+ + I A+ +S++GSIGV+ Sbjct: 91 SPVQSELIAKRIRDLAKENKIKIYSFIEDMAASGGYWLACSGDRIYASYSSVIGSIGVVS 150 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++KLG+ + KA PF +N +++++D+ Y FV V Sbjct: 151 SGFGFHEAINKLGIERRVYTEGKNKAILDPFKPINKDDLKIIKDLQKQVYEHFVEYVKTR 210 Query: 197 R-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + +L +G W G A GLID +G V + + + + Sbjct: 211 RVGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVMKEKFGDNIKF------QYLCA 264 Query: 256 KNYWFCDLKNLSISSLLED 274 K W +S L ++ Sbjct: 265 KQPWLKKKLGMSSKILADN 283 >gi|16125179|ref|NP_419743.1| signal peptide peptidase SppA [Caulobacter crescentus CB15] gi|221233913|ref|YP_002516349.1| signal peptide peptidase [Caulobacter crescentus NA1000] gi|13422197|gb|AAK22911.1| signal peptide peptidase SppA [Caulobacter crescentus CB15] gi|220963085|gb|ACL94441.1| signal peptide peptidase [Caulobacter crescentus NA1000] Length = 594 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 18/264 (6%) Query: 33 DNSPHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSP 76 + P +A I G I S ++ + + D A++ +SSP Sbjct: 293 KSGPAIAVIGAEGAIITGTDASASPFGGDSNVYSDDVAQAFRAATEDKDVKAIVFRVSSP 352 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS A E I A+Q K KPV+ + AAS GY IS ++ I+A ++L GSIGV Sbjct: 353 GGSDTASEQILAALQAAKKAGKPVVVSMGTYAASGGYWISSQADSIIAQPSTLTGSIGVY 412 Query: 136 FQYPYVKPFLDKLGVSI-KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L + GV + P+ +D Y F+ V+ Sbjct: 413 GGKFAIGEALARFGVDTKDLHVGADYSQAFGAGEGFTPEQRAKFAGWMDRIYAGFITRVA 472 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E RN+P K ++ GR+WTG +AK++GL+D +GG E + AL + +IK Sbjct: 473 EGRNLPPAKVREIAKGRVWTGEQAKQLGLVDELGGYYEAVEKAKALAKVKGDIRIKHMQG 532 Query: 255 PKNYWFCDLKNLSISSLLEDTIPL 278 + + K L +S T+ Sbjct: 533 GASPFEAFEKFLGVSETSAKTMAA 556 Score = 99.1 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 84/216 (38%), Gaps = 9/216 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAAS 109 +IE + R +DD A++V L G + A + + A + + +KP+ + S Sbjct: 74 SVIETLRRAEKDDKVKAILVRLPEGGVAPAAADELRLAFKHFREVGKKPIYAHSQGLYPS 133 Query: 110 AG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y++ A++ S ++G+ + + K F DK GV + + K + Sbjct: 134 GMVTSTYMLGAATSEFWMQPDSSFQAVGISSESMFFKRFFDKYGVKAEYEQRYEYKNAVN 193 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 P+ S+ P + + S Y + + R K + +G + EA+ GL Sbjct: 194 PYLHSDYTPAHRESTLSWMGSVYRTALTSAAVDRKQDPTKLMKTLEGGPYIAQEAQAKGL 253 Query: 224 IDVVGGQEEVWQ-SLYALGVDQSIRKIKDWNPPKNY 258 ID VG ++ +L G + D+ Sbjct: 254 IDKVGQVSDIQAFALEKAGKGAKLLDFDDYASRSKP 289 >gi|15807090|ref|NP_295819.1| endopeptidase IV-like protein [Deinococcus radiodurans R1] gi|6459892|gb|AAF11646.1|AE002045_6 endopeptidase IV-related protein [Deinococcus radiodurans R1] Length = 556 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 25/230 (10%) Query: 37 HVARIAIRGQI-------------------EDSQELIERIERISRDDSATALIVSLSSPG 77 VA +++ G I S ++ ++ D + A++V ++S G Sbjct: 281 KVAVVSVVGSIVTGKSKNNPLPLPLLGGPMAGSDTVVAALKHAKEDKATKAIVVYVNSGG 340 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GSA A + ++R I + KPV+ + E AAS GY ++ ++ IVA+ +L GSIGV+ Sbjct: 341 GSALASDLMWREI--ATSDKPVVVVMGEYAASGGYYLATHADKIVASPYTLTGSIGVVSG 398 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P ++ F + G+ + V SP + ++ + Y F V+E R Sbjct: 399 KPVMQEFNGRQGLKPERVGR-DRALMYSPSRPYTDEERAHIEKGIGEVYDRFTSRVAEGR 457 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE---EVWQSLYALGVDQ 244 ++ ++ + GRIW+G +A ++GL+D +G E+ + L L D Sbjct: 458 DLSQERVNEIGRGRIWSGYDALELGLVDELGDLHRGLELARELAGLPDDA 507 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 72/170 (42%), Gaps = 5/170 (2%) Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM-AASAGYLISCASNIIVAAET 126 ++V +S + AI ++++ K + + ++ S +++ + I A E+ Sbjct: 88 GVLVRVSEFTAAPATAHAIREILRRLSENKRTVAYLPQLTMTS--LIVASGAQEIAAPES 145 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDS 184 + V G + ++ FL K G+ ++++ KA + FS+ ++ + + + Sbjct: 146 ADVMVSGFAAEPTFLGAFLKKHGIEFENLRIKEYKAALTRFSQDHMDEANREQLSAYLGG 205 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + +++ R + + L + + A GLID V ++E+ Sbjct: 206 LEAAWAADLAQGRGVSEEDALGWLTADLTSAQGAVDAGLIDRVAYEDELI 255 >gi|67459011|ref|YP_246635.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] gi|67004544|gb|AAY61470.1| Signal peptide peptidase SppA [Rickettsia felis URRWXCal2] Length = 304 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 18/260 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S D+ +A + + G I + L E IE+ + AL + ++SPG Sbjct: 30 FASVFGDSKEVIAVLRLSGVIGKVSTMQSGLTLESLNELIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + + + + +MAAS GY ++C+ + I A+ +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAKENKIKIYSFIEDMAASGGYWLACSGDWIYASYSSVIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + KA PF +N + +++++++ Y FV V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKAILDPFKPINKEDLKIIKNLQQQVYEHFVDYVKT 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + +L +G W G A GLID +G + + + + + Sbjct: 210 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSIMKEKFGDNIKF------QYLC 263 Query: 255 PKNYWFCDLKNLSISSLLED 274 K W + L ++ Sbjct: 264 AKQPWLKKKLGMGSKILTDN 283 >gi|222478889|ref|YP_002565126.1| signal peptide peptidase SppA, 36K type [Halorubrum lacusprofundi ATCC 49239] gi|222451791|gb|ACM56056.1| signal peptide peptidase SppA, 36K type [Halorubrum lacusprofundi ATCC 49239] Length = 311 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 20/251 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQI---------------EDSQELIERIERISRDDS 65 V + E + A++ + G I + +++E+IE D+ Sbjct: 29 LVARLTRGRFGETEEYNTAKVTVSGPIRRDTGRPSPLSRAGGATADDVVEQIEAADEDED 88 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 AL+V L++PGG + I RA P + + AS GY I+ + + A + Sbjct: 89 VEALVVELNTPGGEVLPSDDIRRAAADF--DGPTLAYATDTCASGGYWIASGCDELWARD 146 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 SLVGSIGV+ P DKLG+S + + K P E+ + +Q ++D Sbjct: 147 ASLVGSIGVVGSRPNAAGLADKLGISYEQFTAGEYKDAGVPLREIEEDEREYLQGIIDGY 206 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y FV VSE R++ + ++ R++ G++A ++GL+D +G +++V L L + Sbjct: 207 YEQFVETVSEGRDMDPEAIRE-TEARVYLGSDAAEIGLVDELGTEDDVEDRLEEL--IDT 263 Query: 246 IRKIKDWNPPK 256 +I ++ P + Sbjct: 264 EPEIHEFTPKR 274 >gi|157964478|ref|YP_001499302.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] gi|157844254|gb|ABV84755.1| Signal peptide peptidase SppA, 36K type [Rickettsia massiliae MTU5] Length = 304 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 18/260 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S ++ +A + + G I + L E IE+ + AL + ++SPG Sbjct: 30 FASVFGNSKEVIAVLRLSGVIGKVSTMQSGLTLESLNELIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + + + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAKENKIKIYSFIEDMAASGGYWLACSGDRIYALPSSVIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + K+ PF +N +++++++ Y F+ V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKSVLDPFKPINKDDLKIIKNLQKQVYEHFIEYVKT 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 R + +L +G W G A GLID +G V + + + + Sbjct: 210 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVMKEKFGDNIKF------QYLY 263 Query: 255 PKNYWFCDLKNLSISSLLED 274 K W + L ++ Sbjct: 264 AKQSWLKKKLGMGSKILTDN 283 >gi|261253391|ref|ZP_05945964.1| SohB protein peptidase U7 family [Vibrio orientalis CIP 102891] gi|260936782|gb|EEX92771.1| SohB protein peptidase U7 family [Vibrio orientalis CIP 102891] Length = 349 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 115/258 (44%), Gaps = 15/258 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 97 SKREPHLFVLDFKGSIDAKEVASLREEVTAILAVAREGD--EVLLRLESGGGMVHGYGLA 154 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 155 SSQLDRLKAAKLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVL 214 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E KA + + ++ ++ F + E R P + Sbjct: 215 KKYDIEYEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRERR--PALELE 272 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A ++GL+D + +++ +I ++ K L Sbjct: 273 KVATGEHWFGTQAHELGLVDEIKTSDDLVVEACKDKTVLAIHYVE-----KKKLTSKLAG 327 Query: 266 LSISSLLEDTIPLMKQTK 283 L+ + + L+ + + Sbjct: 328 LAGEAADNVLMKLIDRGQ 345 >gi|255541922|ref|XP_002512025.1| Protease, putative [Ricinus communis] gi|223549205|gb|EEF50694.1| Protease, putative [Ricinus communis] Length = 578 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 15/261 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I ++ IE+I ++ A I+ + Sbjct: 267 WTLGLTGGGDQIAVIRASGSISRVRSPTSLPGSGIVGEQFIEKIRQVRESKRYKAAIIRI 326 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A+ IVA +L GSIG Sbjct: 327 DSPGGDALASDLMWREIRLLAETKPVIASMSDVAASGGYYMAMAAGAIVAENLTLTGSIG 386 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP-FSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + + + + + P ++ ++Y F Sbjct: 387 VVTGKFNLGKLYEKIGFNKEIISRGKYAELLAAEQRPLRPDEAELFARSAQNAYQQFRDK 446 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKD 251 + SR++P +K ++ GR+WTG +A GL+D +GG + + Q + I Sbjct: 447 AAFSRSMPVNKMEEVAQGRVWTGKDAASRGLVDAIGGLSRAVAIAKQKASIPQEKQVILV 506 Query: 252 WNPPKNYWFCDLKNLSISSLL 272 + ++ + SS+ Sbjct: 507 ELSRPSPSLPEILSGVGSSIA 527 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 59/137 (43%), Gaps = 3/137 (2%) Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE-- 169 Y ++CA + I ++ G+ Q ++ L+K+G+ + + K+ + Sbjct: 114 YYLACACDDIYVPPSAYFSLYGLTVQASFLGGVLEKVGIQPEVQRIGKYKSAGDQLTRKT 173 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 ++ + +M+ ++D+ Y ++ +S + ++ + ++ KK G I + Sbjct: 174 MSEENCEMLTTLLDNIYGNWLDNISSIKGKEREEIENFINEGVYEVERLKKEGFITNIQY 233 Query: 230 QEEVWQSLYA-LGVDQS 245 +EV L LGV + Sbjct: 234 DDEVISMLKEKLGVQKD 250 >gi|212634753|ref|YP_002311278.1| putative periplasmic protease [Shewanella piezotolerans WP3] gi|212556237|gb|ACJ28691.1| SohB protein, peptidase U7 family [Shewanella piezotolerans WP3] Length = 343 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 11/228 (4%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRA 89 N P V I +G I D+ E+ E IS D +IV++ S GG + Sbjct: 94 NDPKVFVIDFKGSI-DAGEVASLREEISAILTIADKGDEVIVNVESGGGMVHGYGLASSQ 152 Query: 90 IQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K Sbjct: 153 LDRLRKAEIPLSICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQVPNFNRLLKKH 212 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + K + F E + + Q ++ ++ F +S+ R P ++ Sbjct: 213 DIDYEQHTAGDFKRTLTIFGENTDEGREKFQKELEETHVLFKEFISKYR--PELDIAKVA 270 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G W G +A ++GLID V ++V L ++++ K+ K Sbjct: 271 TGEHWYGQQAIELGLIDEVATSDDVI---LKLANERTVVKVSYQLKKK 315 >gi|126463497|ref|YP_001044611.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17029] gi|126105161|gb|ABN77839.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17029] Length = 265 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 22/267 (8%) Query: 35 SPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 P V I ++G I Q L IE+ R + + ++SPGGS I Sbjct: 11 DPVVPVIRLQGVIASGPRGGLSDQGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLIA 70 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K V V ++AAS GY ++CA + I E+SLVGSIGV+F F+ Sbjct: 71 ARIRRLASEKGVRVHAFVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFM 130 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + G+ + + K+ PF P+ V+ ++ + + + F+ V R D Sbjct: 131 ARNGIERRVHTAGRSKSLADPFLPEKPEDVERLKALQEPIHRAFIEHVKRHRGARLDLNA 190 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L + +WTG EA ++GL D V Q +Y V ++ + + + + Sbjct: 191 DLFNADVWTGQEAVRLGLADGVAHLVPKLQEIYGDKV-----RLVPYGQRRPFLQRLGMS 245 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 L+ +L E + + LWA + Sbjct: 246 LAGQALAE--------VENRALWARYG 264 >gi|83945357|ref|ZP_00957705.1| probable proteinase [Oceanicaulis alexandrii HTCC2633] gi|83851191|gb|EAP89048.1| probable proteinase [Oceanicaulis alexandrii HTCC2633] Length = 281 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGS 79 S + + P V I + G I Q + ++IE+ A+A+ + ++SPGGS Sbjct: 20 SLLGMDKPVVPVIRLEGVIMSGGRNANALNLQRVEKQIEKAFSMTDASAVALLINSPGGS 79 Query: 80 AYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I I+ + N K V+ ++AAS GY ++ A++ I +++GSIGV+ Sbjct: 80 PVQSRLIHERIRALANEKDKAVLAFCEDVAASGGYFLAVAADEIFVDPATIIGSIGVINA 139 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 ++KLGV + + K PFS + M+ ++++ + F+ LV R Sbjct: 140 GFGFTEAMEKLGVERRVKTAGKSKLIADPFSPETDAQKERMERLLNTVHGQFIELVKSRR 199 Query: 198 N--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + + L DG ++TG EA + G+ D +G V ++ + V + P Sbjct: 200 GEKLNPQEGEELFDGSVFTGTEALQNGIADEIGDLRSVVRARFGEDVRVKVFSPARQGPL 259 Query: 256 KNYWFCDLKNLSISSL 271 + L + + ++ Sbjct: 260 SRLFGAALDGVELRAV 275 >gi|196018409|ref|XP_002118798.1| hypothetical protein TRIADDRAFT_62805 [Trichoplax adhaerens] gi|190578184|gb|EDV18716.1| hypothetical protein TRIADDRAFT_62805 [Trichoplax adhaerens] Length = 783 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 122/193 (63%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 + ++QE+I+ + +++ D++ A++V+++S GG+ GE+++R ++++ KPV+ + E Sbjct: 584 TLMENQEMIKSLNKLANDNNVKAVLVNINSTGGTGAGGESLYRELRRIAKNKPVVASIGE 643 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + ASAGY+++ ++ I A + SLVGSIGV+ + K G++++ +KSSP+K P+ Sbjct: 644 IGASAGYMVALGTDRIFAYDISLVGSIGVIIMNFEINELAKKHGINLELIKSSPLKGVPN 703 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 F +++ + + +Q++ + S +F++LV RN+ + +S+G+I+ G +A K+ LID Sbjct: 704 YFEKLDNQQKEYVQNLANESNQYFIKLVKNRRNLSEEDLKAVSNGKIFIGTKAMKLKLID 763 Query: 226 VVGGQEEVWQSLY 238 VG + L Sbjct: 764 QVGDMNDAINWLK 776 >gi|162456619|ref|YP_001618986.1| protease IV [Sorangium cellulosum 'So ce 56'] gi|161167201|emb|CAN98506.1| Protease IV [Sorangium cellulosum 'So ce 56'] Length = 896 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 15/252 (5%) Query: 35 SPHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSPGGS 79 SP VA + + G + D + + + R D S A+++ + + GGS Sbjct: 575 SPKVALVYLDGDMIDGESRSIPFVGVKLAGSYTVAGALRRAREDQSVRAVVLRVETGGGS 634 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I R KP++ + AAS GY S A I A+ +S+ GSIGV + Sbjct: 635 TLAADVILREAILTARVKPLVVSMGSSAASGGYYASVAGAPIFASRSSITGSIGVFYGKV 694 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V L KLGVSI++ +SSP S + + + V Y FV + E+R++ Sbjct: 695 DVTGLLQKLGVSIETFRSSPRADAESLYRPYTDDEREQLGVKVKQFYDRFVARIVENRHM 754 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 ++ L G++WTGA+A + LID +GG + LG I+ Sbjct: 755 KAEEVDALGRGQVWTGAQALERRLIDRLGGLRQAIAEARRLGQLPDDAPIQSLPEEDTSL 814 Query: 260 FCDLKNLSISSL 271 L S Sbjct: 815 LGYALGLVGFSA 826 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 98/245 (40%), Gaps = 17/245 (6%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQ--IEDSQELIERIERISRDDSATAL--IVSLSSP 76 V S+S V R+ + + L++++ R++ D + + ++ P Sbjct: 328 GVALRSFSEPGVRLPARVVRVRLDSTPGVRRHTRLLQQLWRLAEDPEVSGVALVLRAE-P 386 Query: 77 GGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIG 133 S E + AI+ +++ K V+ + + G + +++ I + G Sbjct: 387 ASSLAHAEEVSDAIRNLRSHGKKVLCHLEDA---GGRSLHVCSSADAIAMNPAGGLRFAG 443 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK--AVQMMQDVVDSSYHWFVR 191 + Y Y L+KLGV V+ K F+ Q ++D F+ Sbjct: 444 MSSSYFYFGGLLNKLGVQADIVRIGAHKLAAEQFARETSTRVGKDDHQALLDQLSDAFLA 503 Query: 192 LVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 VS R IP + ++ G + EA++ GL+D++ +E+ + + + S ++ Sbjct: 504 EVSAGRRIPVPELERRIARG-PFLAQEARQSGLVDMLAYDDELGRVIDEVMGRAS--RVV 560 Query: 251 DWNPP 255 D +PP Sbjct: 561 DDDPP 565 >gi|317496118|ref|ZP_07954478.1| signal peptide peptidase SppA [Gemella moribillum M424] gi|316913693|gb|EFV35179.1| signal peptide peptidase SppA [Gemella moribillum M424] Length = 323 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 121/252 (48%), Gaps = 12/252 (4%) Query: 32 EDNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++ + +I+I G+I +I +I+ + + A+++S+++PGG Y Sbjct: 59 GNSDETIQKISIEGEIGAEMTNTYSRASIINQIKEAKSNSNVKAILLSVNTPGGGVYETA 118 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++ ++ + K V + + A S GY +S A+ I A + GS+GV+ + + + Sbjct: 119 ELYNELKN--SGKDVYVSMKKQATSGGYYVSMAAKKIFANTETTTGSLGVIMSFVSAQKY 176 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ G+ ++++S KA ++ ++ Q+ +Y FV+ +++ RN+ D+ Sbjct: 177 LNDHGIKQETIRSGEQKAIGGLLEDLPESTRKIYQEQNKEAYDRFVKAIAQGRNMSEDEV 236 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK--NYWFCD 262 L+DGR +TG +A + LID +G +E++ + + K+ + P K Sbjct: 237 RKLADGRTYTGTQAVENKLIDKIGTEEDLINFIKEDKKLFN-PKVIELRPDKAAESLLSR 295 Query: 263 LKNLSISSLLED 274 ++ S++ + Sbjct: 296 FVKATMKSIISE 307 >gi|226496121|ref|NP_001146232.1| hypothetical protein LOC100279804 [Zea mays] gi|224028317|gb|ACN33234.1| unknown [Zea mays] Length = 672 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 16/261 (6%) Query: 31 VEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPG 77 ++ +A I G I +++LIE+I + + A+I+ + SPG Sbjct: 364 LQGGGEQIAIIRASGSITRTRSPLSAPSSGIVAEQLIEKIRTVRESEKYKAVILRIDSPG 423 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + ++R I+ + N KPV+ + ++AAS GY ++ A+ +IVA + +L GSIGV+ Sbjct: 424 GDALASDLMWREIRLLANSKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSIGVVTG 483 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ +++ + + + + + P ++ + ++Y F + S Sbjct: 484 KFCLQKLYERIDFNKEIISKGRYAELNVNDQRPLRPDEAELFEKSAQNAYALFRDKAAMS 543 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI--KDWNP 254 R++ D+ ++ GR+W+G +A GL+D VGG + +KI + + Sbjct: 544 RSMSVDQMESVAQGRVWSGHDAFSRGLVDSVGGLSQALAIAKQKANIPKDKKIQLVEVSK 603 Query: 255 PKNYWFCDLKNLSISSLLEDT 275 P L + S L D Sbjct: 604 PSPSLPEILSGIGGSLLGVDR 624 Score = 80.6 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 84/226 (37%), Gaps = 23/226 (10%) Query: 43 IRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAG-----EAI 86 +RG+I D ++ E + + D + + + + + I Sbjct: 127 LRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIE-----PLRCGWAKVDEI 181 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R I K + + Y ++CA + A ++ V G+ Q +++ L+ Sbjct: 182 RRHIVDFKKSGKFVVGYMPVCGEKEYYLACACGELYAPPSAYVALFGLTVQQTFLRGVLE 241 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+G+ + + K+ ++ + +M+ ++D+ Y ++ +S + ++ Sbjct: 242 KVGIEPEIQRIGKYKSAGDQLARKSMSNEVREMLAALLDNIYGNWLETISSTHGKKKEEI 301 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + ++ A K+ G + + +EV L + + ++ Sbjct: 302 EGFINSGVYQVARLKEEGWVTDLLYDDEVMTLLKERVGQKDKKSLR 347 >gi|323499379|ref|ZP_08104355.1| putative inner membrane peptidase [Vibrio sinaloensis DSM 21326] gi|323315564|gb|EGA68599.1| putative inner membrane peptidase [Vibrio sinaloensis DSM 21326] Length = 353 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 10/212 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 101 SKREPHLFVLDFKGSIDAKEVASLREEVTAILAVAREGD--EVLLRLESGGGMVHGYGLA 158 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 159 SSQLDRLKAAKLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVL 218 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E KA + + ++ ++ F + E R P + Sbjct: 219 KKYDIEYEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRERR--PALELE 276 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GL+D + +++ Sbjct: 277 KVATGEHWFGTQAHELGLVDEIKTSDDLVVEA 308 >gi|299134685|ref|ZP_07027877.1| peptidase S49 [Afipia sp. 1NLS2] gi|298590495|gb|EFI50698.1| peptidase S49 [Afipia sp. 1NLS2] Length = 293 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 14/267 (5%) Query: 38 VARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + + G I + + +E+ A A+ + ++SPGGS I+ Sbjct: 28 VPVVRLSGTIGAVTPLRPGLSLSGVSKLLEKAFETKRAKAVALVINSPGGSPVQSHQIYA 87 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ K PV+ V ++AAS GY+I+CA + I +S++GSIGV+ + + Sbjct: 88 RIRQLAETKKIPVLAFVEDVAASGGYMIACAGDEIFCDSSSILGSIGVIGGTFGFQDLIK 147 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTL 205 K+G+ + S K+ PF +P V ++ + + F+ LV SR + Sbjct: 148 KIGIERRIYTSGEHKSSLDPFLPESPDDVARLKAIQREIHDSFIDLVKRSRGARLQGEAS 207 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G W G + K+GL D +G V ++ Y G + I + + Sbjct: 208 YLFSGEYWAGERSVKLGLADGIGDLRSVVRARY--GERVRMPVIAPKSGLLSTLAGRKPG 265 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 L+ + + LWA + Sbjct: 266 AEAMIGAGFADDLISALETRALWARYG 292 >gi|254693181|ref|ZP_05155009.1| Clp protease [Brucella abortus bv. 3 str. Tulya] Length = 736 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 466 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 525 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 526 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 585 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 586 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 645 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 646 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 700 Query: 266 LSISS 270 + + S Sbjct: 701 IGMDS 705 >gi|189023636|ref|YP_001934404.1| Clp protease [Brucella abortus S19] gi|254688698|ref|ZP_05151952.1| Clp protease [Brucella abortus bv. 6 str. 870] gi|254696825|ref|ZP_05158653.1| Clp protease [Brucella abortus bv. 2 str. 86/8/59] gi|189029213|sp|Q2YMB3|NHAA_BRUA2 RecName: Full=Na(+)/H(+) antiporter nhaA; AltName: Full=Sodium/proton antiporter nhaA gi|189019208|gb|ACD71930.1| Clp protease [Brucella abortus S19] Length = 736 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 466 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 525 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 526 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 585 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 586 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 645 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 646 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 700 Query: 266 LSISS 270 + + S Sbjct: 701 IGMDS 705 >gi|187924894|ref|YP_001896536.1| peptidase S49 [Burkholderia phytofirmans PsJN] gi|187716088|gb|ACD17312.1| peptidase S49 [Burkholderia phytofirmans PsJN] Length = 334 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 8/229 (3%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSL 73 + V H A + + G+I +++++ ++ D +I+ Sbjct: 64 AIWAAIDFSGDKVAATGRHTAMVTLDGEISADTNANAEDVNTALQSAFDDAGTAGVILRC 123 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVG 130 +SPGGS I+ I++++ + P + V +M AS GY + A++ I + S+VG Sbjct: 124 NSPGGSPVQAGIIYNEIRRLRAKYPSIPLYVVVGDMCASGGYYAAAAADKIYVDKASIVG 183 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGVL +DKLG+ + S K PFS PK + QD++D + F+ Sbjct: 184 SIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFFDPFSPETPKMDEHAQDMLDQIHAQFI 243 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V + R +T + G WTG ++ ++GL D +G + V + L+ Sbjct: 244 DAVRQGRGKRLHETPDMFSGLFWTGQKSVELGLADGLGDADYVARDLFK 292 >gi|86139080|ref|ZP_01057651.1| peptidase, family S49 [Roseobacter sp. MED193] gi|85824311|gb|EAQ44515.1| peptidase, family S49 [Roseobacter sp. MED193] Length = 290 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 14/236 (5%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 SP V+ + + G I + L +E A+ + ++SPGGS Sbjct: 34 KKSPLVSVVRLSGAIGMSSRGSLNDATLAPVLEAAFSKGKPDAVALEINSPGGSPVQSSL 93 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ K PV+ V ++AAS GY ++ A++ I A +S+VGSIGV+ + Sbjct: 94 IGARIRRLAKEKDLPVLAFVEDVAASGGYWLAAAADEIWADASSIVGSIGVISAGFGAQE 153 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L++ GV + + K+ PF NP+ V ++ ++ + F+ V++ R D Sbjct: 154 LLNRHGVERRVYTAGESKSMLDPFQAENPEDVARLKVLLGDIHDNFITHVTDRRGDKLDS 213 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + L G IW A ++GLID +G + + V K++ ++ K + Sbjct: 214 SEKLFTGEIWLAKRATELGLIDGIGHIKPTLIDRFGDKV-----KLRRYSIKKPFL 264 >gi|83952481|ref|ZP_00961212.1| peptidase, family S49 [Roseovarius nubinhibens ISM] gi|83836154|gb|EAP75452.1| peptidase, family S49 [Roseovarius nubinhibens ISM] Length = 280 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 9/218 (4%) Query: 34 NSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + P VA + + G I + + I++ A+ + ++SPGGS I Sbjct: 23 SRPRVAVVRLAGTIGSGPRAALSDEAIGPVIDKAFARGKPKAVALVINSPGGSPVQSALI 82 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ K PV V ++AAS GY ++ A++ I S++GSIGV+ F Sbjct: 83 AARIRRLSEEKGVPVHAFVEDVAASGGYWLAVAADDIWVDYGSILGSIGVISAGFGAHVF 142 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ + + K+ PF + V ++ ++ + F+ V R + Sbjct: 143 LARQGIERRVYTAGESKSTLDPFQPEKKEDVARLESLLAQMHTGFIDHVKARRGDKLSRD 202 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G W G +A ++GL D E + LY V Sbjct: 203 EKLFTGEFWIGRQAVELGLADGEAHLEPKLKELYGDKV 240 >gi|254713038|ref|ZP_05174849.1| Clp protease [Brucella ceti M644/93/1] gi|254716609|ref|ZP_05178420.1| Clp protease [Brucella ceti M13/05/1] Length = 306 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I + +E+ D A A+ +S++SPGG+ I+ Sbjct: 36 IPVVRLHGAIMTGGTSLRATLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 95 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 96 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 155 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 156 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 215 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 216 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 270 Query: 266 LSISS 270 + + S Sbjct: 271 IGMDS 275 >gi|261218409|ref|ZP_05932690.1| peptidase S49 [Brucella ceti M13/05/1] gi|261320742|ref|ZP_05959939.1| peptidase S49 [Brucella ceti M644/93/1] gi|260923498|gb|EEX90066.1| peptidase S49 [Brucella ceti M13/05/1] gi|261293432|gb|EEX96928.1| peptidase S49 [Brucella ceti M644/93/1] Length = 290 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I + +E+ D A A+ +S++SPGG+ I+ Sbjct: 20 IPVVRLHGAIMTGGTSLRATLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 79 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 140 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 200 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 254 Query: 266 LSISS 270 + + S Sbjct: 255 IGMDS 259 >gi|260431642|ref|ZP_05785613.1| peptidase, family S49 [Silicibacter lacuscaerulensis ITI-1157] gi|260415470|gb|EEX08729.1| peptidase, family S49 [Silicibacter lacuscaerulensis ITI-1157] Length = 265 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 16/256 (6%) Query: 36 PHVARIAIRGQI-------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P VA + + G I L +E+ R +A+ + ++SPGGS I Sbjct: 12 PVVAVVRLSGAIGMAGRASMSDTALAPVLEKAFRKGKPSAVALEINSPGGSPVQSSLIGA 71 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ + PV V ++AAS GY ++ +++ I A ++S++GSIGV+ F+ Sbjct: 72 RIRRLADELNVPVHAFVEDVAASGGYWLAASADRIWADDSSVLGSIGVISSGFGAHVFIA 131 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + G+ + + K+ PF+ P+ V ++ +++ + F+ V R D+T Sbjct: 132 RQGIERRVHTAGQSKSMLDPFAPEKPEDVARLRGLLEDIHQNFIAHVKARRGDRLDETAD 191 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLK 264 L G +W A+ +GLID + + Q L+ V + + + K W F Sbjct: 192 LFTGEVWLARRAQDLGLIDGIAHLKPKMQELFGDKV-----RFRRYGLRKPIWSRFGADM 246 Query: 265 NLSISSLLEDTIPLMK 280 ++LE+ + Sbjct: 247 AQDALAMLEERAAFAR 262 >gi|17987818|ref|NP_540452.1| Na(+)/H(+) antiporter 1 / protease IV [Brucella melitensis bv. 1 str. 16M] gi|17983545|gb|AAL52716.1| na(+)/h(+) antiporter 1 / protease iv [Brucella melitensis bv. 1 str. 16M] Length = 763 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 493 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 552 Query: 88 RAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + +K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 553 RRIRDLAAEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 612 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 613 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 672 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 673 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 727 Query: 266 LSISS 270 + + S Sbjct: 728 IGMDS 732 >gi|305663247|ref|YP_003859535.1| signal peptide peptidase SppA, 36K type [Ignisphaera aggregans DSM 17230] gi|304377816|gb|ADM27655.1| signal peptide peptidase SppA, 36K type [Ignisphaera aggregans DSM 17230] Length = 319 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 16/287 (5%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-----------ELIERIERISRDDSA 66 + L ++ S S +P++A I + G I+ Q + E + +I D A Sbjct: 18 IALQLLIPSPLSIFTPPTPYIALIELHGTIDYEQPLFSGSTITPKTVSELVNKILSDPYA 77 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A++V ++SPGG+ A I+ ++K+ + K VI + +AAS GYLI+ + I+A + Sbjct: 78 KAVVVVVNSPGGT-MAAFEIYSILKKLSSEKIVIVYITNIAASGGYLIALPAREIIANPS 136 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + +GS+G + V L KLG+++ VKS +K S + E ++ ++ +VDS Sbjct: 137 ATIGSVGAIATIINVHNLLQKLGINVTIVKSGELKDVGSMYRETTETDIETIKSLVDSIA 196 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + F+ V E R + ++ EAK++GLID +G + L Sbjct: 197 NEFIEKVIECRGNKIKNISEIRRAGVYPAREAKELGLIDDIGDLDYAINRARQLAGLPPT 256 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 IK P K L ++ + + P + + + +W P Sbjct: 257 TPIKRIEPTKP----SLLDIILGRVETQVTPTPRTPRSIEILLIWPP 299 >gi|34580537|ref|ZP_00142017.1| possible protease sohB [Rickettsia sibirica 246] gi|157828421|ref|YP_001494663.1| protease sohB [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933133|ref|YP_001649922.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] gi|229586670|ref|YP_002845171.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] gi|238650916|ref|YP_002916772.1| signal peptide peptidase [Rickettsia peacockii str. Rustic] gi|28261922|gb|EAA25426.1| possible protease sohB [Rickettsia sibirica 246] gi|157800902|gb|ABV76155.1| possible protease sohB [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908220|gb|ABY72516.1| signal peptide peptidase [Rickettsia rickettsii str. Iowa] gi|228021720|gb|ACP53428.1| Signal peptide peptidase SppA, 36K type [Rickettsia africae ESF-5] gi|238625014|gb|ACR47720.1| signal peptide peptidase [Rickettsia peacockii str. Rustic] Length = 304 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 13/264 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S ++ +A + + G I + L IE+ + AL + ++SPG Sbjct: 30 FASVFGNSKEVIAVLRLSGVIGKVSTMQSGLTLESLNALIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + + + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAEENKIKIYSFIEDMAASGGYWLACSGDRIYALPSSVIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + K+ PF +N +++++D+ Y F+ V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKSVLDPFKPINKDDLKIIKDLQKQVYEHFIEYVKT 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD-WN 253 R + +L +G W G A GLID +G V + + + K W Sbjct: 210 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVMKEKFGDNIKFQYLCAKQPWL 269 Query: 254 PPKNYWFCDLKNLSISSLLEDTIP 277 K + ++++ L D + Sbjct: 270 KKKLGMGSKILTDNLANSLIDAVE 293 >gi|261213422|ref|ZP_05927703.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 3 str. Tulya] gi|260915029|gb|EEX81890.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 3 str. Tulya] Length = 723 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 453 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 512 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 513 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 572 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 573 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 632 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 633 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 687 Query: 266 LSISS 270 + + S Sbjct: 688 IGMDS 692 >gi|260545864|ref|ZP_05821605.1| clp protease [Brucella abortus NCTC 8038] gi|260754175|ref|ZP_05866523.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 6 str. 870] gi|260761219|ref|ZP_05873562.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 2 str. 86/8/59] gi|260097271|gb|EEW81146.1| clp protease [Brucella abortus NCTC 8038] gi|260671651|gb|EEX58472.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 2 str. 86/8/59] gi|260674283|gb|EEX61104.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 6 str. 870] Length = 723 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 453 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 512 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 513 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 572 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 573 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 632 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 633 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 687 Query: 266 LSISS 270 + + S Sbjct: 688 IGMDS 692 >gi|329297657|ref|ZP_08254993.1| putative inner membrane peptidase [Plautia stali symbiont] Length = 348 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + E P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGVTEAAKPTLYVLEFKGS-MDAGEVSSLREEISAVLAVAQPGDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q++++ + V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 149 GYGLAASQLQRLRDAGLQLTAVVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L + + ++ + K + F E + + Q+ ++ ++ F V + R P Sbjct: 209 FNRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQEDLNETHQLFKDFVHQMR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A +GLID +G + + Sbjct: 267 ALDLDKVATGEHWYGRQALDLGLIDEIGTSDALI 300 >gi|270159568|ref|ZP_06188224.1| putative peptidase [Legionella longbeachae D-4968] gi|289165636|ref|YP_003455774.1| signal peptide peptidase [Legionella longbeachae NSW150] gi|269987907|gb|EEZ94162.1| putative peptidase [Legionella longbeachae D-4968] gi|288858809|emb|CBJ12723.1| signal peptide peptidase [Legionella longbeachae NSW150] Length = 318 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 19/284 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIED-----SQELIERIERISR 62 R + L ++ V FS S++ E + PHV + I G++ D S + + ++ + Sbjct: 39 RVIYLLIIAYIVYQFSASTNEEGGTNTKPHVGIVDINGEMADAKPANSDDFAKGLDAAYK 98 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASN 119 + ALIV ++SPGGS E ++ I+ + + P + + + ASA Y ++ A++ Sbjct: 99 NSGLKALIVRINSPGGSPVQAEYMYNTIKYYQKKHPDIKIYSVCVDACASAAYYVAVATD 158 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ S+VGSIGVL+ V ++K+GVS + S K PFS Q +Q Sbjct: 159 AIYASPASMVGSIGVLYNGFGVVDLMNKIGVSRRLQTSGVNKGFLDPFSPQTDFEKQKLQ 218 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ V E R G WTG +A +GLID ++ + + Sbjct: 219 TMLDIVHQQFINRVKEGRGSRLHIDDETFSGLFWTGEQALTMGLIDGYASSGQLAREII- 277 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 ++ ++ D+ +N + KN I + + D +PL + Sbjct: 278 -----NVPEVIDYTHKQNLFDRVTKN--IGTAMADELPLSFGAR 314 >gi|254461803|ref|ZP_05075219.1| peptidase, family S49 [Rhodobacterales bacterium HTCC2083] gi|206678392|gb|EDZ42879.1| peptidase, family S49 [Rhodobacteraceae bacterium HTCC2083] Length = 265 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 14/236 (5%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P VA + + G I + Q L +++ A+ + ++SPGGS Sbjct: 9 KSEPVVAVVRLSGAIGMSGRGALNDQSLAPVLDKAFTRGKPDAVALQINSPGGSPVQSSL 68 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ + PVI V ++AAS GY ++ A++ I A E+S++GSIGV+ Sbjct: 69 IGARIRRLADENEIPVIAFVEDVAASGGYWLAAAADEIYADESSVLGSIGVISAGFGAHV 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL K G+ + + K+ PF+ + V ++ +++ + F+R V + R DK Sbjct: 129 FLAKQGIERRVYTAGKSKSMMDPFTPETEEDVARVKGMLEQIHTNFIRYVQKRRGEKLDK 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G IW G AK VGLID + ++ + V K + P + + Sbjct: 189 GSELFTGDIWIGDVAKDVGLIDGIAHLVPAMKARFGDKV-----TFKRYGPKRGFM 239 >gi|254718576|ref|ZP_05180387.1| Clp protease [Brucella sp. 83/13] gi|265983552|ref|ZP_06096287.1| peptidase S49 [Brucella sp. 83/13] gi|264662144|gb|EEZ32405.1| peptidase S49 [Brucella sp. 83/13] Length = 290 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 20 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 79 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 140 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIKRLKALQLEIHATFIDMVKERRAGKLGDNP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 200 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 254 Query: 266 LSISS 270 + ++S Sbjct: 255 IGMNS 259 >gi|171915041|ref|ZP_02930511.1| peptidase, U7 family protein [Verrucomicrobium spinosum DSM 4136] Length = 343 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 14/257 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLS 74 + + + RI I G I + + +E+ S D S A+++ ++ Sbjct: 56 EAGAAETKDKIVRIDIEGIIASGPAGDLFSEGGMNVEAIQRALEQASEDKSVKAIVIRVN 115 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + ++ A++K RK V+ + +AAS GY ++C ++ IVA ET+L SIGV Sbjct: 116 SPGGEVTASDNLYNAVKKAAARKKVVVYMDSIAASGGYYLACGASKIVANETTLTASIGV 175 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + Q K+G+ + S K S + + +Q +V + Y FV +V+ Sbjct: 176 IIQSLNYSQTFGKVGLETMTFASGKFKDTLSGSRPMREDEREYIQSLVSAMYDKFVGIVA 235 Query: 195 ESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++RNI + ++DGR+ TG +A + L+D +G E+ + LG + +K Sbjct: 236 KARNIDEAQLRTGVADGRVVTGKQALEYKLVDQLGYVEDAYALAKELGSAKDAMVVKYSL 295 Query: 254 PPKNYWFCDLKNLSISS 270 P + + +S Sbjct: 296 TPSLAQLLGIMGKAQAS 312 >gi|91205146|ref|YP_537501.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157827519|ref|YP_001496583.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] gi|91068690|gb|ABE04412.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii RML369-C] gi|157802823|gb|ABV79546.1| Signal peptide peptidase SppA, 36K type [Rickettsia bellii OSU 85-389] Length = 304 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 12/225 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S D+ VA + + G I + L E IE+ + AL + ++SPG Sbjct: 30 FASIFGDSKEVVAVLRLNGVIGKVSTVQSGLTLESLNELIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + + + +MAAS GY ++CA + I A +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRTLAKEHKIKIYSFIEDMAASGGYWLACAGDQIYALHSSIIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + KA PF +N + V++++D+ Y FV V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKAVLDPFKPINKEDVKIIKDLQKQVYEHFVDYVKT 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + +L +G W G A GLID +G ++ + Sbjct: 210 RRVGKLTQQDDILFNGEFWAGRTALDYGLIDDLGDMYSTMKAKFG 254 >gi|254703750|ref|ZP_05165578.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella suis bv. 3 str. 686] gi|256031039|ref|ZP_05444653.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella pinnipedialis M292/94/1] gi|256060533|ref|ZP_05450701.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella neotomae 5K33] gi|256254442|ref|ZP_05459978.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella ceti B1/94] Length = 299 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 29 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 88 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 89 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 148 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 149 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 208 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 209 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 263 Query: 266 LSISS 270 + + S Sbjct: 264 IGMDS 268 >gi|332288220|ref|YP_004419072.1| putative periplasmic protease [Gallibacterium anatis UMN179] gi|330431116|gb|AEC16175.1| putative periplasmic protease [Gallibacterium anatis UMN179] Length = 361 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 7/218 (3%) Query: 35 SPHVARIAIRGQI--EDSQELIERIER--ISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 P V I +G I + L E I +++ L SPGG + + Sbjct: 111 KPCVYVIDFKGDIQANATNSLREEINAVLAVARPEKDEVLLRLESPGGVVHGYGFAASQL 170 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q+++N+ P+ V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P + L K Sbjct: 171 QRLRNKHIPLTIAVDKVAASGGYMMACVADKIVAAPFAIIGSIGVVAQVPNIHRLLKKHD 230 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V ++ + + K + E K Q Q + ++ F + V++ R P + ++ Sbjct: 231 VDVEVMTAGEYKRTVTVLGENTEKGKQKFQQELQETHDLFKQFVAQHR--PQVEIDKVAT 288 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 G W G +A + LID V +++ + +I+ Sbjct: 289 GEHWFGQQALDLALIDEVKTSDDLILAAIEEKDVLAIK 326 >gi|77464657|ref|YP_354161.1| S49 family peptidase [Rhodobacter sphaeroides 2.4.1] gi|77389075|gb|ABA80260.1| Peptidase family S49 [Rhodobacter sphaeroides 2.4.1] Length = 265 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 22/267 (8%) Query: 35 SPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 P V I ++G I Q L IE+ R + + ++SPGGS I Sbjct: 11 DPVVPVIRLQGVIASGPRGGLSDQGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLIA 70 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + K V V ++AAS GY ++CA + I E+SLVGSIGV+F F+ Sbjct: 71 ARIRRLASEKGVRVHAFVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFM 130 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + G+ + + K+ PF P+ V+ ++ + + + F+ V R D Sbjct: 131 ARNGIERRVHTAGRSKSLADPFLPEKPEDVERLKALQEPIHRAFIEYVKRHRGTRLDLNA 190 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L + +WTG EA ++GL D V Q Y V ++ + + + + Sbjct: 191 DLFNADVWTGQEAVRLGLADGVAHLVPKLQENYGDKV-----RLVPYGQRRPFLQRLGMS 245 Query: 266 LSISSLLEDTIPLMKQTKVQGLWAVWN 292 L+ +L E + + LWA + Sbjct: 246 LAGQALAE--------VENRALWARYG 264 >gi|296282880|ref|ZP_06860878.1| periplasmic serine protease [Citromicrobium bathyomarinum JL354] Length = 628 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 9/247 (3%) Query: 31 VEDNSPHVARIAIRGQIEDSQ--------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 +D+ + + I G+I D + I + + +D L+V + SPGGS A Sbjct: 307 FDDSGDAIGVVTIAGEIVDGDAGPGTAGGDRIADLLDDALNDDLKGLVVRVDSPGGSVLA 366 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 EAI AI + K + PV + +AAS GY +S ++ I A ++ GSIG+ P Sbjct: 367 SEAIREAILRHKAKGIPVAVSMANVAASGGYWVSTPADRIFAEPETITGSIGIFAVLPTF 426 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + K+GVS V ++P+ +P NP+ Q++Q +++ Y F+ +V++SR Sbjct: 427 EKLASKVGVSADGVSTTPLSGQPDFVGGFNPETEQILQASIENGYDRFLGIVAKSRGKTP 486 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 + + GR+W G A++ GL+D G ++ + + + ++ + Sbjct: 487 AQIDAIGQGRVWDGGTARQNGLVDQFGDLDDALAWVAGKAGLEDDAYHARFLGSESSEYQ 546 Query: 262 DLKNLSI 268 L + Sbjct: 547 TLLRQLV 553 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 96/251 (38%), Gaps = 22/251 (8%) Query: 49 DSQELIERIERISRDDSATALIVSLSSP-GGSAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 D Q+L+ ++ + DD A+++ + + G A + A+ +V+ KPV+ M Sbjct: 80 DVQDLVHALDTAAEDDRVKAVVLDMRTFLGAGAVHLREMGAALDRVRAADKPVLAY--GM 137 Query: 107 AAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G ++ ++ + G + Y LDKLGV+ + K K+ Sbjct: 138 AYSDDGLRLAAHASEVWLDPLGGAMIAGPGGKRLYYGDLLDKLGVNARVFKVGTYKSAVE 197 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVL-------SDGRIWTG 215 P+ + ++ A + +++ + + V ++R I ++ ++G I Sbjct: 198 PYLGNSMSEPARENARELYGELWSEWQASVKKARPKIDIERVAQTPAEWVASANGDI--A 255 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 A G++D +G + + K + P ++ DL +D+ Sbjct: 256 KAAVAAGMVDKLGSWTAFGDRVAEIAGKD-----KSDSKPGSFAHTDLATWLADKPFDDS 310 Query: 276 IPLMKQTKVQG 286 + + G Sbjct: 311 GDAIGVVTIAG 321 >gi|294141564|ref|YP_003557542.1| sohB protein, peptidase U7 family [Shewanella violacea DSS12] gi|293328033|dbj|BAJ02764.1| sohB protein, peptidase U7 family [Shewanella violacea DSS12] Length = 343 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 14/244 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E P V + +G I+ S+ E I I I+ +IV++ S GG + Sbjct: 92 ETLDPRVFVVDFKGSIDASEVASLREEISAILAIAE--KGDEVIVTVESGGGMVHGYGLA 149 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ + V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 150 SSQLDRLRQADIHLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQIPNFHKLL 209 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + Q ++ ++ F + +++ R P Sbjct: 210 KKHDIDYEQHTAGDFKRTLTLFGENTDEGRAKFQTELEETHVLFKQFIAKYR--PELDLD 267 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A ++GLID + ++V L ++++ K++ + KN+ Sbjct: 268 KVATGEHWYGQQAIELGLIDGISTSDDVVMKLAK---ERTVIKVR-YQLKKNFADKIAHG 323 Query: 266 LSIS 269 S+S Sbjct: 324 ASLS 327 >gi|254701204|ref|ZP_05163032.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella suis bv. 5 str. 513] gi|254709545|ref|ZP_05171356.1| Clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella pinnipedialis B2/94] gi|261221612|ref|ZP_05935893.1| peptidase S49 [Brucella ceti B1/94] gi|261315361|ref|ZP_05954558.1| peptidase S49 [Brucella pinnipedialis M163/99/10] gi|261317072|ref|ZP_05956269.1| peptidase S49 [Brucella pinnipedialis B2/94] gi|261324527|ref|ZP_05963724.1| peptidase S49 [Brucella neotomae 5K33] gi|261751742|ref|ZP_05995451.1| peptidase S49 [Brucella suis bv. 5 str. 513] gi|261754396|ref|ZP_05998105.1| peptidase S49 [Brucella suis bv. 3 str. 686] gi|265988110|ref|ZP_06100667.1| peptidase S49 [Brucella pinnipedialis M292/94/1] gi|265997575|ref|ZP_06110132.1| peptidase S49 [Brucella ceti M490/95/1] gi|260920196|gb|EEX86849.1| peptidase S49 [Brucella ceti B1/94] gi|261296295|gb|EEX99791.1| peptidase S49 [Brucella pinnipedialis B2/94] gi|261300507|gb|EEY04004.1| peptidase S49 [Brucella neotomae 5K33] gi|261304387|gb|EEY07884.1| peptidase S49 [Brucella pinnipedialis M163/99/10] gi|261741495|gb|EEY29421.1| peptidase S49 [Brucella suis bv. 5 str. 513] gi|261744149|gb|EEY32075.1| peptidase S49 [Brucella suis bv. 3 str. 686] gi|262552043|gb|EEZ08033.1| peptidase S49 [Brucella ceti M490/95/1] gi|264660307|gb|EEZ30568.1| peptidase S49 [Brucella pinnipedialis M292/94/1] Length = 290 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 20 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 79 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 140 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 200 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 254 Query: 266 LSISS 270 + + S Sbjct: 255 IGMDS 259 >gi|254707871|ref|ZP_05169699.1| Clp protease [Brucella pinnipedialis M163/99/10] gi|256159103|ref|ZP_05456924.1| Clp protease [Brucella ceti M490/95/1] gi|260168171|ref|ZP_05754982.1| Clp protease [Brucella sp. F5/99] Length = 306 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 36 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 95 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 96 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 155 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 156 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 215 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 216 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 270 Query: 266 LSISS 270 + + S Sbjct: 271 IGMDS 275 >gi|253582352|ref|ZP_04859575.1| protease IV [Fusobacterium varium ATCC 27725] gi|251835891|gb|EES64429.1| protease IV [Fusobacterium varium ATCC 27725] Length = 584 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 12/236 (5%) Query: 32 EDNSPHVARIAIRGQI-EDSQE-----------LIERIERISRDDSATALIVSLSSPGGS 79 +A I G I DS +IE I + +DD+ +++ ++SPGGS Sbjct: 307 NKKKDKIAVIYAEGTIFMDSTSGGISGNVTPNVMIEEINKALKDDTVKGIVLRINSPGGS 366 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A I I + KP+ + + AS GY I+ + I A + SL GSIGV+ P Sbjct: 367 ALAANIISNKIVEANGIKPIYVSIGGVGASGGYYIASVTEKIYADKDSLTGSIGVVSIIP 426 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K L + +++ VK S + + + Y+ F+ VS R + Sbjct: 427 NIKKMLGNVSINVDEVKKGEYSDIYSMVKDFDKDKRDKLYASNLKVYNEFLDTVSFGRKL 486 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ G++W G EA ++GL+D +GG E + L ++ N P Sbjct: 487 NRQHVERIAQGKVWLGEEALELGLVDEIGGLENAIKGLAGDLKLIDYEIVEIMNAP 542 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 104/268 (38%), Gaps = 40/268 (14%) Query: 3 FVLKKIKTRYV---MLSLVTLTVVYFSWSSHVEDNSPHV---ARIAIR------------ 44 FV+K+I + ++ + +V ++ F + +E + + + + I Sbjct: 17 FVIKEIFSFFIKAFLFLVVIFSIGAFFAKTALEKDKVTIEKGSYVEIDLSKEYKEKGKNL 76 Query: 45 -----GQIEDSQELIERIERISRDDSATALIVS-----LSSPGGSAYAGEAIFRAIQKVK 94 GQ + ++ + I RD + +++ L S E + + I +K Sbjct: 77 PEFLKGQDTNFFSMLRAFDSIERDGNIKGVVLKLDNLSLDS-----AQIEEVGKKIDNLK 131 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAET--SLVGSIGVLFQYPYVKPFLDKLGVSI 152 K + M + Y ++ SN I T + V G + Y K D+LG+ Sbjct: 132 KSKKEVYSYMTMVNNRNYSLAIKSNQIFMPPTMSAPVNITGYYGELMYYKLLADRLGIEF 191 Query: 153 KSVKSSPMKAEP-SPFSE-VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSD 209 + KA + E ++ + + ++ + + Y+ FV ++ R + +D + + Sbjct: 192 NVIHVGDYKAYGENLIKEHISKEYKENIERMYNRKYNNFVNNIAAERKVNHDFINEKILN 251 Query: 210 GRIWTGA--EAKKVGLIDVVGGQEEVWQ 235 G + + KK+ L+D +++ Q Sbjct: 252 GDLMVSEPNQMKKLNLVDEFMYYDQLKQ 279 >gi|317488446|ref|ZP_07946999.1| signal peptide peptidase SppA [Eggerthella sp. 1_3_56FAA] gi|316912490|gb|EFV34046.1| signal peptide peptidase SppA [Eggerthella sp. 1_3_56FAA] Length = 369 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 12/274 (4%) Query: 25 FSWSSHVED----NSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLS 74 F S V+D V I I G I + L +++R ++ A+++ ++ Sbjct: 92 FGTGSTVDDVDYLTGDAVGVIDIDGTIQYDNTTSSPEGLKAQLDRAEKNSHIKAVVLRVN 151 Query: 75 SPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 S GG+A AGE + ++ + KPV+ + ASA Y IS ++ I A+T+ +G+I Sbjct: 152 SGGGTATAGEEMADYVRGFSERTGKPVVVSSASVNASAAYEISSQADYIYTAKTTAIGAI 211 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G + Q + ++KLG+S+ +V S+ K + + QD VD F++ Sbjct: 212 GTVMQVTDLSGLMEKLGISVDNVTSADSKDSSYGTRPLTEEERAYYQDQVDQINETFIQT 271 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R++P + L+ G +TG A + GL D +G +++ L + Sbjct: 272 VAEGRDMPVEDVRALATGLTFTGMTAVENGLADEIGTKDDAVAKAAELANIAHYTTVTLK 331 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 NP + + +D +K+ G Sbjct: 332 NPTSSLSSLLDLMSKSNVSTDDIARALKELDTDG 365 >gi|83310697|ref|YP_420961.1| periplasmic serine protease [Magnetospirillum magneticum AMB-1] gi|82945538|dbj|BAE50402.1| Periplasmic serine protease [Magnetospirillum magneticum AMB-1] Length = 582 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 19/269 (7%) Query: 37 HVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VA I+ G I SQ + E DD+ ++ + SPGGS A Sbjct: 298 KVALISGIGAIHRGESHHGLDGDGDFGSQTVAEAFRDAVDDDAVKVILFRVDSPGGSYIA 357 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + + +++ + K V+ + AAS GY ++ ++ I+AA ++ GSIGV + Sbjct: 358 SDTVHHEVERARKAGKKVVVSMGNYAASGGYFVAMGADRIIAAPGTITGSIGVFTGKVVL 417 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 F KLG+S + S + +A + ++D Y F S +RN+ Sbjct: 418 DEFWKKLGISWDEMHRGDNAGMWSANQPFSSQAKARIDTLLDHIYADFTGKASAARNLDA 477 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKDWNPPKNY 258 + L+ GRIWTGA+AK+ GL+D +GG E + + L VD+++ + ++ P+ Sbjct: 478 ARMDKLARGRIWTGADAKQSGLVDGLGGWAEALSQVRQVGGLKVDETLTLV-EFPRPRKP 536 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 W ++L S+ E I + + L Sbjct: 537 WQVLAESLGGGSVAERRILARIEPLLDVL 565 Score = 95.2 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 9/203 (4%) Query: 51 QELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 ++++E ++R + D + + +L SP G A + + A+ + + KP + + Sbjct: 78 RQVVEALDRAAADSRVSGVFATLGHSPLGLA-GRQDLRDAVARFRASGKPAVLFAETLGE 136 Query: 109 SAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 Y ++ A + + + VG G+ + P++K LD LG+ + K+ Sbjct: 137 GGSGTLDYYLATAFSQVWLQPSGDVGLTGLWVESPFIKGTLDLLGIKAQFSGRHEYKSAI 196 Query: 165 SPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 F+E P + + ++DS V ++ +R +P + L + +EA Sbjct: 197 DMFTETGFTPAHRENLGRLLDSWSEQIVAGIAAARGLPEPQVRELMGKGPFLASEALAAR 256 Query: 223 LIDVVGGQEEVWQSLYALGVDQS 245 L+D VG ++E W + +G D++ Sbjct: 257 LVDKVGYRDEAWGMIAGIGKDKA 279 >gi|222147714|ref|YP_002548671.1| proteinase sohB [Agrobacterium vitis S4] gi|221734702|gb|ACM35665.1| proteinase sohB [Agrobacterium vitis S4] Length = 288 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 23/273 (8%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I + +E+ + + A+++SL+SPGGS IF Sbjct: 20 IPVVRLHGAIMSGGSRFRPALNLAAIAPLLEKAFKLKDSPAVVLSLNSPGGSPVQSRMIF 79 Query: 88 RAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + + K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ L Sbjct: 80 QRIRTLADEHSKTVLVFVEDVAASGGYMIALAGDEIIADPTSIVGSIGVVSGGFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF ++ ++ + + F+ +V R I + Sbjct: 140 KKIGVERRVYTAGENKVMLDPFQPEKQSDIEYLKTLQLDIHDVFIDMVKTRRGIRLNDNP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG + ++GL+D +G E ++ Y +++ + + + L Sbjct: 200 ELFSGLFWTGRKGFELGLVDGLGSMREEIKARYG-----KTARLELISGARGLFGRRLSG 254 Query: 266 LSISSLLEDTI------PLMKQTKVQGLWAVWN 292 + + I L++ + + LWA + Sbjct: 255 VDTAFSAPSDIGSAAAAGLVETLEDRALWARYG 287 >gi|167523164|ref|XP_001745919.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775720|gb|EDQ89343.1| predicted protein [Monosiga brevicollis MX1] Length = 1557 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 15/250 (6%) Query: 31 VEDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAY 81 + S V I G I +I + R A+++ + S GGSA Sbjct: 308 ISAKSSRVGVIRCGGTIVSGKGQRGSFGQDNIIPMLWEAHRRADIDAVVLRVDSSGGSAL 367 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 A + I R + ++ KPV+ +AAS GY IS ++ IVA S+ GSIGV P Sbjct: 368 ASDLIAREVARLAAVKPVVASFGTLAASGGYYISALAHTIVADPMSITGSIGVAMLRPNG 427 Query: 142 KPFL-DKLGVSIKSVKS-SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + D +GV + P+ ++ ++P+ + + YH F+++V + R + Sbjct: 428 QKLIDDMMGVRHHLISEPGPLARVNDFYAPMSPEVRAYLDKRSEEVYHAFLKIVCQGRGM 487 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG----VDQSIRKIKDWNPP 255 ++ + G++++ +A++ GL+D +G ++ L V + P Sbjct: 488 SLEEAEKHAKGQVFSAEQAQQRGLVDQLGSLQDAVDQAAKLAQRRQVTPGQTLYEVLRPK 547 Query: 256 KNYWFCDLKN 265 ++ Sbjct: 548 MSFLQRQFMG 557 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 88/256 (34%), Gaps = 56/256 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA---GEAIFRAIQKVKNRK-PVITE---V 103 + + + + D A+ + L G A + + IQ+++ V + Sbjct: 71 DDTMSLLRKAQHDPLIHAVWLDLD---GYAAPLTRTAELVQRIQQLQAAGTKVYVYGTVI 127 Query: 104 HEMAASAG------------YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 L+ A+ A ++ V G F+ KPFL KLG+ Sbjct: 128 THAVCLGAPQLFGIFIIMPVALVGAAAERFFAPSSASVNLHGFSFRVSAYKPFLQKLGLD 187 Query: 152 IKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +++V+S K F+ +VNP VQ M D++ R + T LS Sbjct: 188 VEAVRSGEFKGIVDTFAADDVNPAVVQNMGDLL--------------RGMTKSYTERLSQ 233 Query: 210 GRIWT--GAEAKKVGLID--------------VVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + + A ++ L+D + ++E + + + K + Sbjct: 234 -LVESLDATAAAQL-LVDSPAIDDLAQHFPNLQIAYKDEAYADVVRTHKPDAAPKTRFVV 291 Query: 254 PPKNYWFCDLKNLSIS 269 P K Y LK + ++ Sbjct: 292 PEKRYARFSLKKIGVA 307 >gi|213424433|ref|ZP_03357246.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 342 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 85 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 141 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 142 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 201 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 202 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 259 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 260 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 299 >gi|260460358|ref|ZP_05808610.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] gi|259034003|gb|EEW35262.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] Length = 287 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 14/269 (5%) Query: 37 HVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + I + G I IE+ + A A+ +S++SPGGS I Sbjct: 19 TIPVIRLHGTIMAGGGPFRPSLSLASTAGLIEKAFSFE-APAVAISINSPGGSPVQSRLI 77 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F+ I+ + K V+ V ++AAS GY+I+ A + I A +S+VGSIGV+ Sbjct: 78 FKRIRDLATEKNKKVLVFVEDVAASGGYMIAVAGDEIFADPSSIVGSIGVVSASFGFPEL 137 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + K+GV + + KA PF + V+ ++ + + F+ LV E R Sbjct: 138 MKKIGVERRVHTAGQNKAVLDPFKPEKKEDVERLKALQLEVHETFIDLVKERRGTKLKDD 197 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G WTG + ++GL+D + V ++ + + + F + Sbjct: 198 PDLFTGLFWTGKKGLELGLVDALSDMRTVLKTRFGAKTQLRLITAPRGFLGRFGLFGSSQ 257 Query: 265 NLSISSL-LEDTIPLMKQTKVQGLWAVWN 292 S + ++ + + LWA + Sbjct: 258 GFSAPDIAAAAASGVIDAAEERALWARFG 286 >gi|330860996|emb|CBX71269.1| putative protease sohB [Yersinia enterocolitica W22703] Length = 305 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 47 AKSGAVAAVKPCLYVIDFKGSI-DAHEVASLREEISAVLAVATAQDEVLLRLESPGGVVH 105 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 106 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 165 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 166 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVHQQR--P 223 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 224 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 257 >gi|254303887|ref|ZP_04971245.1| S49 family protease IV [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324079|gb|EDK89329.1| S49 family protease IV [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 551 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 128/275 (46%), Gaps = 14/275 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSP 76 ++ + +A I + G+I+ + +IE+++ + + L++ ++SP Sbjct: 273 AYKRKKNKSKNTIAIINLEGEIDTRESKEANINYDNVIEKLDELEDIKNLKGLVLRINSP 332 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA E I++ ++K+ P+ + ++ AS GY I+ + A +L GSIGV+ Sbjct: 333 GGSALESEKIYQKLKKL--DIPIYISMGDLCASGGYYIATVGKKLFANSVTLTGSIGVVV 390 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 YP ++KL V+++ S+++ ++ + + ++ Y+ F V ++ Sbjct: 391 LYPEFTEAINKLKVNMEGFSKGKGFDIFDVTSKLSKESKEKIIYSMNEVYNEFKEHVMKA 450 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 RNI + ++ GR+W G++AK GL+D +G + SL ++ K+ K Sbjct: 451 RNISEEDLEKIAGGRVWLGSQAKANGLVDELGSLNDCIDSLVK-DLELKDFKLTYIRGRK 509 Query: 257 NYW--FCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + +K I S + + ++K + L+ Sbjct: 510 SMMEVISAMKPQFIKSDIIEKFEMIKSYSNKILYY 544 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 98/230 (42%), Gaps = 22/230 (9%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 +SL + V F+ + VED ++ ++I + + +++ +E + D +I+ + Sbjct: 38 VSLKGIKTVVFNLNELVEDY--MISTVSINKTL-SHEAVLKALENLVNDKKIEKIIIDVD 94 Query: 75 SPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 E I +K+ K +I + Y ++ +N I + Sbjct: 95 ----EVDLSRVHIEEIKEIFEKLSVNKEIIA-IGTTFDEYSYQVALLANKIYML-NTKQS 148 Query: 131 SI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSS 185 S+ G ++ PY K L LGV++ ++ K FS +++ + + + ++ ++ Sbjct: 149 SLYFRGYEYKEPYFKNILTNLGVTVNTLHIGDYKVAGESFSNDKMSEEKKESLINIKETL 208 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTG--AEAKKVGLIDVVGGQEEV 233 + F+ LV E R + T + G + +A ++GLID + EE+ Sbjct: 209 FQNFINLVKEKRKVDI--TNEILSGDLIFANSEKAIQLGLIDGLSTYEEI 256 >gi|300716945|ref|YP_003741748.1| peptidase, family U7 [Erwinia billingiae Eb661] gi|299062781|emb|CAX59901.1| Peptidase, family U7 [Erwinia billingiae Eb661] Length = 349 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 E P + + +G D+ E+ E +S + +++ L SPGG + Sbjct: 97 ESTKPTLYVLDFKGS-MDAHEVSSLREEVSAVMAVAKPQDEVLLRLESPGGVVHGYGLAS 155 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q+++++ + V ++AAS GY+++C ++ IVAA S+VGSIGV+ Q P L Sbjct: 156 SQLQRLRDKGIRLTVAVDKVAASGGYMMACVADRIVAAPFSIVGSIGVVAQIPNFNRLLK 215 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 216 RNEIDVELHTAGEYKRTLTLFGENTEQGREKFREDLNETHLLFKQFVHQMR--PSLDIDS 273 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A + GL+D +G +++ Sbjct: 274 VATGEHWFGTQALEKGLVDAIGTSDDLI 301 >gi|157825673|ref|YP_001493393.1| Signal peptide peptidase SppA [Rickettsia akari str. Hartford] gi|157799631|gb|ABV74885.1| Signal peptide peptidase SppA [Rickettsia akari str. Hartford] Length = 304 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S D+ +A + + G I + L E IE+ + AL + ++SPG Sbjct: 30 FASVFGDSKEVIAVLRLSGVIGKVSTMQSGLTLESLNELIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + + + + +MAAS GYL++C+ + I A+ +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAKENKIKIYSFIEDMAASGGYLLACSGDWIYASYSSVIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + KA PF +N + +++++D+ Y FV V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKAILDPFKPINKEDLKIIKDLQKHVYEHFVEYVKT 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD-WN 253 R + +L +G W G A GLID +G + + + + K W Sbjct: 210 RRVGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSIMKEKFGDNIKFQYLCAKQHWL 269 Query: 254 PPKNYWFCDLKNLSISSLLEDTIP 277 K + + ++++ L D I Sbjct: 270 KKKLGMCSKILSDNLANSLIDAIE 293 >gi|330445595|ref|ZP_08309247.1| peptidase S49 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489786|dbj|GAA03744.1| peptidase S49 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 353 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 11/234 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 S P + + G + D++E+ E I+ + +++ L + GG + Sbjct: 97 GSLDTSREPRLFVVDFHGSL-DAREVSSLREEITAILAVAIEGDEVLLRLETGGGMVHGY 155 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K + V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 156 GLASSQLDRLKAAGIKLTVSVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQLPNFN 215 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E KA + Q ++ ++ F V+ R P Sbjct: 216 KLLKKNDIDYEQITAGEFKRTLTMFGENTDKAREKFQTEIEETHSLFKNFVAFHR--PDL 273 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G W G +A +GL+D + +++ D+ + K+K K Sbjct: 274 DLEKVATGEHWFGQQALDLGLVDQISTSDDLITEACK---DREVLKVKYVRRKK 324 >gi|148253845|ref|YP_001238430.1| putative serine protease SohB [Bradyrhizobium sp. BTAi1] gi|146406018|gb|ABQ34524.1| putative serine protease SohB [Bradyrhizobium sp. BTAi1] Length = 283 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 +P V + + G I L + +ER +A A+ + ++SPGGS Sbjct: 11 GAPVVPVVRLSGVIGAVTPLRPGLTLAGVAKMLERAFAMRNAKAVALVINSPGGSPVQSR 70 Query: 85 AIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ I+++ K PV+ V ++AAS GY+I+CA + I +S++GSIGV+ ++ Sbjct: 71 QIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIFCDPSSILGSIGVVSGSFGLQ 130 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 ++K+G+ + + KA PF NP AV ++ + + F+ LV ESRN Sbjct: 131 DLINKIGIERRLYTAGEHKAMLDPFLPENPDAVARLKKIQREIHALFISLVKESRNGRLK 190 Query: 203 KTLVL-SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + G W G A +GL D +G V ++ + V Sbjct: 191 SADDVLFTGEYWAGDTAVTLGLADGIGDLRAVLRARFGDKVA 232 >gi|255263417|ref|ZP_05342759.1| peptidase S49 [Thalassiobium sp. R2A62] gi|255105752|gb|EET48426.1| peptidase S49 [Thalassiobium sp. R2A62] Length = 264 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 8/215 (3%) Query: 33 DNSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V+ + ++G I D L +++ +A+ + ++SPGGS I Sbjct: 9 KTKPSVSVVRLQGVITSGGRGLDDASLAPLLKKAFSKGKPSAVALVINSPGGSPVQSSLI 68 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ K PV V ++AAS GY ++ A++ I +S+VGSIGV+ + Sbjct: 69 GARIRRLSQEKDIPVFAFVEDVAASGGYWLASAADEIFVDPSSVVGSIGVISAGFGLNEA 128 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + + GV + + K+ PF P V+ ++ +++ ++ F VSE R D+T Sbjct: 129 IGRYGVERRVYTAGKSKSMLDPFQAEKPADVKRLKGMLEQIHNSFKSHVSERRAGKLDET 188 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L G IW GA + +VGL D VG V + + Sbjct: 189 QDLFTGEIWVGAASIEVGLADAVGHLVPVMKDRFG 223 >gi|149925005|ref|ZP_01913327.1| peptidase S49, protease IV:Peptidase S49, SppA [Plesiocystis pacifica SIR-1] gi|149814120|gb|EDM73741.1| peptidase S49, protease IV:Peptidase S49, SppA [Plesiocystis pacifica SIR-1] Length = 887 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 28/268 (10%) Query: 33 DNSPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPG 77 SP+ A + + G I + + I + D + +++ + S G Sbjct: 569 SESPYYAVVLLEGTIIGGKSRTIPILDIKFTGGDTVADTIRALRGDSACKGIVLRVDSGG 628 Query: 78 GSAYAGEAIFRAIQKVKN-----RK---PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 GSA+A E ++R + + +K P++ + ++AAS GY + ++ I A ++ Sbjct: 629 GSAFASEVMWREVALTREAWEKDKKGSPPIVVSMSDVAASGGYYVPVGADTIFAEPLTIT 688 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV++ + V LD LGV++ ++ P + + +P+ ++ Q ++ +Y Sbjct: 689 GSIGVVYMHYDVSGLLDMLGVNVDRIERGSPAIDANAIWQPWSPEQLERQQKGIEQTYDL 748 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 F+ VS R + + + G +W+G AK +GLID GG E + + + K Sbjct: 749 FLSRVSGGRGMTKEAINEVGRGHVWSGKRAKDIGLIDEFGGLREALDEVRERSGEPTY-K 807 Query: 249 IKDW---NPPKNYWFCDLKNLSISSLLE 273 KD+ P L SL+ Sbjct: 808 AKDYPLRLLPSRPSLVQLLVKGAGSLVA 835 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 92/229 (40%), Gaps = 20/229 (8%) Query: 46 QIEDSQELIERIERISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVIT 101 I + + LI + R+ R ++A L++ G AG+ + A+++V++ V Sbjct: 345 SIGNQRTLIATLRRLERAEAAGERSILLIKADGFGMGWAAGQELRDALRRVRDAGGHVYA 404 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + Y I+ + + ++G+ + + K L K+GV ++SV K Sbjct: 405 YAEQPNTR-DYWIASVAEKVYVHPAGRFATVGLGARRLFYKDALAKIGVQVQSVHIDEYK 463 Query: 162 AEPSPFSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW---TG- 215 + F+ + + ++D ++ + ++++R + I+ G Sbjct: 464 SAHESFTRSSRSDYDREQRTALLDDTWDTVLYDIAQARGMSISAVADT----IFESPLGP 519 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL-----GVDQSIRKIKDWNPPKNYW 259 EA G D + ++EV ++L GV S+R+ P + W Sbjct: 520 QEAVDAGFADAITHRDEVLETLGEQLDESGGVVVSLRRFAPTTPERETW 568 >gi|294851776|ref|ZP_06792449.1| hypothetical protein BAZG_00691 [Brucella sp. NVSL 07-0026] gi|294820365|gb|EFG37364.1| hypothetical protein BAZG_00691 [Brucella sp. NVSL 07-0026] Length = 290 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 20 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 79 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 140 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 200 DLFSGLFWTGTAAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 254 Query: 266 LSISS 270 + + S Sbjct: 255 IGMDS 259 >gi|224583792|ref|YP_002637590.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468319|gb|ACN46149.1| putative protease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 348 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|86748216|ref|YP_484712.1| peptidase S49 [Rhodopseudomonas palustris HaA2] gi|86571244|gb|ABD05801.1| Peptidase S49 [Rhodopseudomonas palustris HaA2] Length = 302 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 18/273 (6%) Query: 36 PHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V + + G I + + +ER +A A+ ++++SPGGS I Sbjct: 31 PVVPVVRLSGVIGAVTPLRPGMSLAGVAKLLERAFATRNAKAVALAINSPGGSPVQSRLI 90 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + K PV V ++AAS GY+I+C ++ I +S+VGSIGV+ + Sbjct: 91 YLRIRALAAEKKLPVYAFVEDVAASGGYMIACGADEIYCDPSSIVGSIGVVGGSFGFQEL 150 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 + K+GV + + KA+ PF +P V ++ + + F+ LV +SR Sbjct: 151 IKKIGVERRLYTAGEHKAQLDPFLPEDPGDVARVKALQQEIHALFISLVKDSRGARLKGD 210 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG----VDQSIRKIKDWNPPKNYW 259 L G W GA + +GL D +G V + + V + + K+ Sbjct: 211 DAKLFSGEYWAGATSVSLGLSDAIGDLRAVLRDKFGDKVRTPVIAAPTGLLSGLMRKSSG 270 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 +L + L D L+ + + +WA + Sbjct: 271 AGTEASLDGFAALPDQ--LISALEARAIWAKYG 301 >gi|257790843|ref|YP_003181449.1| signal peptide peptidase SppA, 36K type [Eggerthella lenta DSM 2243] gi|325831972|ref|ZP_08165069.1| signal peptide peptidase SppA, 36K type [Eggerthella sp. HGA1] gi|257474740|gb|ACV55060.1| signal peptide peptidase SppA, 36K type [Eggerthella lenta DSM 2243] gi|325486293|gb|EGC88745.1| signal peptide peptidase SppA, 36K type [Eggerthella sp. HGA1] Length = 350 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 12/274 (4%) Query: 25 FSWSSHVED----NSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLS 74 F S V+D V I I G I + L +++R ++ A+++ ++ Sbjct: 73 FGTGSTVDDVDYLTGDAVGVIDIDGTIQYDNTTSSPEGLKAQLDRAEKNSHIKAVVLRVN 132 Query: 75 SPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 S GG+A AGE + ++ + KPV+ + ASA Y IS ++ I A+T+ +G+I Sbjct: 133 SGGGTATAGEEMADYVRGFSERTGKPVVVSSASVNASAAYEISSQADYIYTAKTTAIGAI 192 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G + Q + ++KLG+S+ +V S+ K + + QD VD F++ Sbjct: 193 GTVMQVTDLSGLMEKLGISVDNVTSADSKDSSYGTRPLTEEERAYYQDQVDQINETFIQT 252 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R++P + L+ G +TG A + GL D +G +++ L + Sbjct: 253 VAEGRDMPVEDVRALATGLTFTGMTAVENGLADEIGTKDDAVAKAAELANIAHYTTVTLK 312 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 NP + + +D +K+ G Sbjct: 313 NPTSSLSSLLDLMSKSNVSTDDIARALKELDTDG 346 >gi|222085058|ref|YP_002543588.1| protease protein [Agrobacterium radiobacter K84] gi|221722506|gb|ACM25662.1| protease protein [Agrobacterium radiobacter K84] Length = 286 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 21/271 (7%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I + + +E+ +A A+ + ++SPGGS I+ Sbjct: 20 IPVVRLSGAIASGGGPLRQSLNLAGISQALEKAFEMKAAPAIALVVNSPGGSPVQSRMIY 79 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ + +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ L Sbjct: 80 NRIRDLAQEKQKKVLVFVEDVAASGGYMIALAGDEIIADATSIVGSIGVVSGGFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 KLGV + + K PF K ++ ++ + + F+ +V E R Sbjct: 140 KKLGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHKVFIDMVRERRAGKLTDDD 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + G WTG ++GLID +G + + + K+ P++ + Sbjct: 200 TVFSGLFWTGGRGLELGLIDGLGDMRQELKKRFG-----EKTKLVLVGTPRSLFGRRAPG 254 Query: 266 LSISSL----LEDTIPLMKQTKVQGLWAVWN 292 +S++ + L + + + LW + Sbjct: 255 VSLAGMDGIGAGLASGLAQAAEEKALWGRYG 285 >gi|299532484|ref|ZP_07045874.1| peptidase S49 [Comamonas testosteroni S44] gi|298719431|gb|EFI60398.1| peptidase S49 [Comamonas testosteroni S44] Length = 348 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 14/270 (5%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLS 74 + V+F ++ SPH A + I+G+I + ++ + D + A+++ ++ Sbjct: 81 MWAVFFKDTATKTSTSPHTAVVEIKGEIASGADASAEFVVAAMRSAFEDSGSRAVVLLIN 140 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGGS I + ++K + KP+ V E ASA Y I+ A++ I + S+VGSI Sbjct: 141 SPGGSPVQAGIINDEMTRLKAKYNKPLYAVVEESCASAAYYIAAAADEIFVDKASIVGSI 200 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL +DK+GV + + + K PFS ++ + + +++ + F+ + Sbjct: 201 GVLMDGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSAQQKEFALQMLEQIHQQFIGV 260 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V R +T + G WTG +A ++GL D +G + V + + ++ D+ Sbjct: 261 VKAGRGDRLHETPEMFSGLFWTGQQAVELGLADKLGSLDYVAREVV------KAEEVIDY 314 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 ++ L +++ E ++ M+ Sbjct: 315 T-RRDNVAERLAKRFGAAIGEGSVKAMRGL 343 >gi|15892468|ref|NP_360182.1| protease sohB [Rickettsia conorii str. Malish 7] gi|15619624|gb|AAL03083.1| possible protease sohB [Rickettsia conorii str. Malish 7] Length = 304 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 13/264 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPG 77 ++S ++ +A + + G I + L IE+ + AL + ++SPG Sbjct: 30 FASVFGNSKEVIAVLRLSGVIGKVSTMQSGLTLESLNALIEKAFKIKKLKALCLIINSPG 89 Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E I + I+ + + + + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 90 GSPVQSELIAKRIRDLAEENKIKIYSFIEDMAASGGYWLACSGDRIYALPSSVIGSIGVV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++KLG+ + K+ PF +N +++++D+ Y F+ V Sbjct: 150 SSGFGFHEAINKLGIERRVYTEGKNKSVLDPFKPINKDDLKIIKDLQKQVYEHFIEYVKT 209 Query: 196 SR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD-WN 253 R + +L +G W G A GLID +G V + + + K W Sbjct: 210 RRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDIYSVMKEKFGDNIKFQYLCAKQPWL 269 Query: 254 PPKNYWFCDLKNLSISSLLEDTIP 277 K + ++++ L D + Sbjct: 270 KKKLGMGSKILTDNLANSLIDAVE 293 >gi|307352941|ref|YP_003893992.1| signal peptide peptidase SppA, 36K type [Methanoplanus petrolearius DSM 11571] gi|307156174|gb|ADN35554.1| signal peptide peptidase SppA, 36K type [Methanoplanus petrolearius DSM 11571] Length = 290 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 13/216 (6%) Query: 33 DNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 S V+ I I G IE S+ + RI + + D A+++ + SPGGS Sbjct: 45 SESKGVSVIRIEGTIETGDFYSGGYVGSEYVGSRIRQAADDPLVEAIVLRVDSPGGSPAG 104 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I +Q K +KPV + +MA SA Y IS ++ I A+ +L GSIG ++ + Sbjct: 105 AQEIIEDVQYAKTKKPVFVSMGDMATSAAYYISAYADKIYASPDTLTGSIGTIWTFIDTS 164 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L GV++ VKS MK S + + + + +Q +VD S+ F+ V RNI + Sbjct: 165 RSLQIEGVNVSIVKSGDMKDLTSQYRGLTDEEQEYVQAMVDESFERFLDDVLSQRNISRE 224 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + +++ G +A +GLID G E ++ Sbjct: 225 DVE---EAQLYRGEDAYDLGLIDEFGNLFETMEAAK 257 >gi|289829092|ref|ZP_06546772.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 317 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|225851933|ref|YP_002732166.1| Na+/H+ antiporter NhaA [Brucella melitensis ATCC 23457] gi|225640298|gb|ACO00212.1| Na+/H+ antiporter NhaA [Brucella melitensis ATCC 23457] Length = 763 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG I+ Sbjct: 493 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGVPVQSRLIY 552 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 553 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 612 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 613 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 672 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 673 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLSG 727 Query: 266 LSISS 270 + + S Sbjct: 728 IGMDS 732 >gi|297247797|ref|ZP_06931515.1| NhaA family Na+:H+ antiporter [Brucella abortus bv. 5 str. B3196] gi|297174966|gb|EFH34313.1| NhaA family Na+:H+ antiporter [Brucella abortus bv. 5 str. B3196] Length = 763 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 493 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQLRLIY 552 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 553 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 612 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + K PF + ++ ++ + + F+ +V E R Sbjct: 613 KKIGVERHVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 672 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 673 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 727 Query: 266 LSISS 270 + + S Sbjct: 728 IGMDS 732 >gi|56413358|ref|YP_150433.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362282|ref|YP_002141919.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127615|gb|AAV77121.1| putative protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093759|emb|CAR59233.1| putative protease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 348 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|34764084|ref|ZP_00144963.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886138|gb|EAA23435.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 263 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ + E +E++ +D A+++ ++SPGGSA + I ++++ KPV + Sbjct: 10 GEEYNVSETLEKLNIAKENDKIKAVVLRVNSPGGSALTSDIIAEKVKELAEEKPVYVSMS 69 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AAS GY IS +N I ++ GSIGV+ P + GV+I+ + Sbjct: 70 SVAASGGYYISANANKIFVDRNTITGSIGVVSILPDFSKLITDNGVNIEKISDGEYSDLY 129 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S S K + + Y F+ +VS+ R I +K +++GRIWTG EA K+GL Sbjct: 130 SVDS-FTEKKYNKIYNSNLKVYEDFLNVVSKGRKIDKEKLKTIAEGRIWTGDEAIKIGLA 188 Query: 225 DVVGGQEEVWQSLYA 239 D +GG E +L Sbjct: 189 DEIGGLNETIYALAE 203 >gi|325497454|gb|EGC95313.1| periplasmic protease [Escherichia fergusonii ECD227] Length = 349 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 17/264 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 + + P V + +G D+ E+ E I+ + ++V L SPGG + Sbjct: 93 GETLSSDKPRVWVLDFKGS-MDAHEVTALREEITAVLAVYKPQDQVVVRLESPGGVVHGY 151 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 152 GLAASQLQRLRDHNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQLPNFN 211 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 212 RFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHLLFKDFVKRMR--PSL 269 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G +A + GL+D + ++V L + + ++ K Sbjct: 270 DIDQVATGEHWYGQQALEKGLVDEINTSDDVI---LGLMNGREVVNVRYMQRKK------ 320 Query: 263 LKNLSISSLLEDTIPLMKQTKVQG 286 L + S+ E L+ + +G Sbjct: 321 LLDRFTGSVAESADRLLLRWWQRG 344 >gi|16760164|ref|NP_455781.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765060|ref|NP_460675.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142065|ref|NP_805407.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180283|ref|YP_216700.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613795|ref|YP_001587760.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549776|ref|ZP_02343534.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993770|ref|ZP_02574863.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230154|ref|ZP_02655212.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237768|ref|ZP_02662826.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241294|ref|ZP_02666226.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260063|ref|ZP_02682036.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462810|ref|ZP_02696741.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819538|ref|ZP_02831538.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194449361|ref|YP_002045763.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469745|ref|ZP_03075729.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735219|ref|YP_002114748.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247759|ref|YP_002146310.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265745|ref|ZP_03165819.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243766|ref|YP_002215425.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204927734|ref|ZP_03218935.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352610|ref|YP_002226411.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|213582175|ref|ZP_03364001.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647994|ref|ZP_03378047.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855228|ref|ZP_03383468.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238911892|ref|ZP_04655729.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25512261|pir||AD0654 probable protease STY1334 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420246|gb|AAL20634.1| putative peptidase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502458|emb|CAD08415.1| putative protease [Salmonella enterica subsp. enterica serovar Typhi] gi|29137694|gb|AAO69256.1| putative protease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62127916|gb|AAX65619.1| putative peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363159|gb|ABX66927.1| hypothetical protein SPAB_01529 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194407665|gb|ACF67884.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456109|gb|EDX44948.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710721|gb|ACF89942.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634032|gb|EDX52384.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211462|gb|ACH48859.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197244000|gb|EDY26620.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289292|gb|EDY28659.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938282|gb|ACH75615.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204323076|gb|EDZ08272.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272391|emb|CAR37271.1| putative protease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205325030|gb|EDZ12869.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328266|gb|EDZ15030.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335298|gb|EDZ22062.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339594|gb|EDZ26358.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343732|gb|EDZ30496.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205351232|gb|EDZ37863.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246906|emb|CBG24723.1| putative protease [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993661|gb|ACY88546.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158244|emb|CBW17743.1| putative protease [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912709|dbj|BAJ36683.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085785|emb|CBY95561.1| putative protease [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224347|gb|EFX49410.1| putative protease sohB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614975|gb|EFY11900.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621431|gb|EFY18285.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623227|gb|EFY20069.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628517|gb|EFY25305.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633681|gb|EFY30421.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638511|gb|EFY35206.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640819|gb|EFY37468.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645317|gb|EFY41845.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651800|gb|EFY48172.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654303|gb|EFY50625.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322662730|gb|EFY58937.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667659|gb|EFY63819.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671927|gb|EFY68048.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677027|gb|EFY73091.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680311|gb|EFY76350.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685260|gb|EFY81256.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714757|gb|EFZ06328.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129988|gb|ADX17418.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195430|gb|EFZ80609.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199319|gb|EFZ84413.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204777|gb|EFZ89773.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205927|gb|EFZ90890.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323220715|gb|EGA05160.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225564|gb|EGA09792.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232116|gb|EGA16223.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234643|gb|EGA18730.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238095|gb|EGA22154.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243301|gb|EGA27320.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248442|gb|EGA32377.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252548|gb|EGA36391.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255427|gb|EGA39193.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260829|gb|EGA44431.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267584|gb|EGA51067.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270950|gb|EGA54386.1| putative inner membrane peptidase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623172|gb|EGE29517.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627673|gb|EGE34016.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988605|gb|AEF07588.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 348 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|262276077|ref|ZP_06053886.1| SohB protein peptidase U7 family [Grimontia hollisae CIP 101886] gi|262219885|gb|EEY71201.1| SohB protein peptidase U7 family [Grimontia hollisae CIP 101886] Length = 352 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 12/232 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAY 81 +S + PHV + +G I D++E+ E ++ + ++V L S GG + Sbjct: 94 DKASLEQSRKPHVFVVDFKGSI-DAREVASLREEVTAILAVAKAGDEVLVRLESGGGMVH 152 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A + ++K P+ V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P Sbjct: 153 AYGLASSQLDRIKQAGIPLTVAVDKVAASGGYMMACVADKIVAAPFAVVGSIGVIAQLPN 212 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + + + + K + F E KA + ++ ++ F + +++ R P Sbjct: 213 FNKLLKKHDIEFEQLTAGEFKRTLTMFGENTDKAREKFLTELEETHALFKQFIADHR--P 270 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYALGVDQSIRK 248 ++ G W G +A +GLID +G ++ + LGV RK Sbjct: 271 SLDLEKVATGEHWFGNQALPLGLIDSIGTSDDYLVSAVKEKDVLGVKYVQRK 322 >gi|13540860|ref|NP_110548.1| secreted serine protease (ClpP class) [Thermoplasma volcanium GSS1] gi|14324243|dbj|BAB59171.1| proteinase IV [Thermoplasma volcanium GSS1] gi|215414354|emb|CAT00893.1| signal peptide peptidase-like protein [Thermoplasma volcanium GSS1] Length = 230 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 3/221 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ++ RI I G I + L ++ S LI+ +S GG A + + I ++K++ Sbjct: 2 YLLRINIEGTINYGLYKYLYPALKAAEGKKSIAGLILVFNSGGGDAASSQLIHDLVKKIR 61 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV + + AS Y I+ AS I A +TSL+GSIGV+ P VK ++K+GV + Sbjct: 62 KKKPVYSLALGICASGAYWIASASTKIYAIDTSLIGSIGVISIRPNVKKLMEKIGVDVMV 121 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 KS K SPFSE N + + Q ++D + F R V+E R IP +K +++G +++ Sbjct: 122 YKSGKYKDMTSPFSEPNEEEKSVYQRLLDDIFEKFKRSVAEDRGIPSEKIDEIANGMVYS 181 Query: 215 GAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSIRKIKDWNP 254 A GLID + +++ L +G +++ P Sbjct: 182 AKMAADNGLIDRIANYDDLVSDLTKEVGKRLKVKEFYIRKP 222 >gi|324113144|gb|EGC07119.1| peptidase S49 [Escherichia fergusonii B253] Length = 349 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 17/264 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 + + P V + +G D+ E+ E I+ + ++V L SPGG + Sbjct: 93 GETLSSDKPRVWVLDFKGS-MDAHEVTALREEITAVLAVYKPQDQVVVRLESPGGVVHGY 151 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 152 GLAASQLQRLRDHNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQLPNFN 211 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 212 RFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHLLFKDFVKRMR--PSL 269 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G +A + GL+D + ++V L + + ++ K Sbjct: 270 DIDQVATGEHWYGQQALEKGLVDEINTSDDVI---LGLMNGREVVNVRYMQRKK------ 320 Query: 263 LKNLSISSLLEDTIPLMKQTKVQG 286 L + S E L+ + +G Sbjct: 321 LLDRFTGSAAESADRLLLRWWQRG 344 >gi|207856771|ref|YP_002243422.1| periplasmic protease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708574|emb|CAR32895.1| putative protease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 348 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|257459261|ref|ZP_05624378.1| signal peptide peptidase SppA, 36K type [Campylobacter gracilis RM3268] gi|257443360|gb|EEV18486.1| signal peptide peptidase SppA, 36K type [Campylobacter gracilis RM3268] Length = 290 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 120/239 (50%), Gaps = 4/239 (1%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 + F+ K K+ + + + F+ + ++A++++ G I D E++E+IE + Sbjct: 15 LGFINKYFKSLIFL----LILFLIFAGGESAQQKGANLAQLSLSGAIMDDSEILEKIEAL 70 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 D++ +++ + SPGG+ I AI+ + +RKPV+ AS YL ++ Sbjct: 71 KNDEAIKGVLLLIDSPGGALSPSVEISLAIKSLNSRKPVVAYAKGTMASGSYLGGVWASK 130 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A S +GSIGV+ Q V KLG + + VK+ +K + + + +Q Sbjct: 131 IYANPGSFIGSIGVIMQGLDVSEAAAKLGFAEQIVKAGELKEAGTMMRKWSDAERASLQA 190 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VD SY F R V+++R++ K ++ R++ + AK VGLID VG ++ +L Sbjct: 191 LVDESYELFTREVAQARSLDIRKRDTWANARVFLASGAKGVGLIDEVGSLDDAKSALVK 249 >gi|85714241|ref|ZP_01045229.1| peptidase S49 [Nitrobacter sp. Nb-311A] gi|85698688|gb|EAQ36557.1| peptidase S49 [Nitrobacter sp. Nb-311A] Length = 306 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 18/268 (6%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + + G I L + +ER D+A A+ + ++SPGGS I+ Sbjct: 37 VPVVRLSGVIGAVTPLRPGMMLAGVAKTLERAFAVDNAKAVALVVNSPGGSPVQSRQIYL 96 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ K PV+ V ++AAS GY+I+CA + I +S++GSIGV+ + Sbjct: 97 RIRQLSREKEIPVLVFVEDVAASGGYMIACAGDEIFCDPSSIMGSIGVVGGSFGFTELMR 156 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+GV + + KA PF NP V ++ + + F+ LV SR T Sbjct: 157 KIGVERRLYTAGEHKATLDPFLPENPDDVARLKAIQREIHATFIELVKASRGERLKGTDD 216 Query: 207 -LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI----RKIKDWNPPKNYWFC 261 L G W G + +GL D +G ++ + V + + + Sbjct: 217 LLFTGEYWAGERSVALGLADAIGDLRSTLRARFGEKVATPVIAPSTGLLSGLLGRKAGAG 276 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWA 289 L +L + + D L+ + + +WA Sbjct: 277 TLTSLDGMAAMPDE--LISALETRAIWA 302 >gi|146339073|ref|YP_001204121.1| putative serine protease SohB [Bradyrhizobium sp. ORS278] gi|146191879|emb|CAL75884.1| putative serine protease SohB [Bradyrhizobium sp. ORS278] Length = 288 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 +P V + + G I L + +ER +A A+ + ++SPGGS Sbjct: 11 GAPVVPVVRLSGVIGAVTPLRPGLTLAGVAKMLERAFSMRNAKAVALVINSPGGSPVQSR 70 Query: 85 AIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ I+++ K PV+ V ++AAS GY+I+CA + I +S+VGSIGV+ ++ Sbjct: 71 QIYLRIRQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIFCDPSSIVGSIGVVGGSFGLQ 130 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + ++G+ + + KA PF NP V ++ + + F+ LV ESR Sbjct: 131 DLIKRIGIERRLYTAGEHKAMLDPFLPENPDDVARLKKIQREIHALFISLVKESRTNRLK 190 Query: 203 KTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 L G W G A +GL D +G V ++ + V Sbjct: 191 GADDLLFTGEYWAGDTAVTLGLADAIGDLRAVLRARFGDKVA 232 >gi|89070172|ref|ZP_01157500.1| peptidase, family S49 [Oceanicola granulosus HTCC2516] gi|89044188|gb|EAR50339.1| peptidase, family S49 [Oceanicola granulosus HTCC2516] Length = 263 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 36 PHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P V + ++G I + +E+ R A+ + +SSPGGS I Sbjct: 12 PKVCVVQLQGPIGIGPRGLSDATVAPLLEKAFRA-KPDAVALQISSPGGSPVQSSLIGGR 70 Query: 90 IQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+++ + + PV+ V ++AAS GY ++ A++ I A +S+VGSIGV+ + F+ + Sbjct: 71 IRRLADERKVPVVAFVEDVAASGGYWLAAAADEIYADASSVVGSIGVISAGFGAQEFIAR 130 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ + S K+ PF P+ V+ ++ +++ + FV V+ R + L Sbjct: 131 HGIERRIHTSGRSKSFLDPFRPEKPEDVERLERLLEEIHEHFVAHVTSRRGAKLAEGADL 190 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G WTGA AK++GL+D +G + + Sbjct: 191 FTGEFWTGARAKELGLVDGIGHLVPEMKRRFG 222 >gi|294675947|ref|YP_003576562.1| S49 family peptidase [Rhodobacter capsulatus SB 1003] gi|294474767|gb|ADE84155.1| peptidase, S49 family [Rhodobacter capsulatus SB 1003] Length = 275 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 20/266 (7%) Query: 36 PHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P VA + ++G I L E +ER R A+ + ++SPGGS I Sbjct: 16 PRVAVVRLQGAIGISRPGAPGLSDAALAETLERAFRKGKPVAVALIINSPGGSPVQSSLI 75 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ + PV + ++AAS GY ++CA++ I A TS+VGSIGV+ Sbjct: 76 AARIRALAAETGLPVHAFIEDVAASGGYWLACAADDIWADATSIVGSIGVISSGFGFADL 135 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + + GV + + K+ PF P+ V + +++ + F V++ R Sbjct: 136 IGRYGVERRVHTAGGSKSFLDPFRPEKPEDVDRLTRLLEDMHRAFKAWVTDRRGAKLAAG 195 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G IWTGA+A + GLID + ++LY V K+ + P +++ L+ Sbjct: 196 ADLFTGEIWTGAQALETGLIDGLAHPGPKLRALYGDKV-----KLVPYGPRRSW----LR 246 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAV 290 S E + +++ + + LWA Sbjct: 247 RFGASMAAEAAVSVLEAAEERALWAR 272 >gi|154245323|ref|YP_001416281.1| peptidase S49 [Xanthobacter autotrophicus Py2] gi|154159408|gb|ABS66624.1| peptidase S49 [Xanthobacter autotrophicus Py2] Length = 295 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 16/269 (5%) Query: 36 PHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P V + + G I + +++ SA A+ + ++SPGGS Sbjct: 26 PVVPVVRLSGAIGMQTTPFARSLSLAGTAQALDKAFAMKSAPAVALLINSPGGSPVQSHL 85 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 IFR I+ + K V V + AAS GY+I+CA++ I A S+VGSIGV+ Sbjct: 86 IFRRIRALAEEKEKHVFAFVEDAAASGGYMIACAADEIFADPCSIVGSIGVVTAGFGFDK 145 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-D 202 ++KLGV + + K PF P+ V+ + ++ + FV LV R+ Sbjct: 146 AIEKLGVERRVYTAGERKVTLDPFRPTRPEDVERLDVLLKELHTVFVDLVRSRRSDALPA 205 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD-WNPPKNYWFC 261 L G W G +A +GL+D +G + ++ Y V + + P + F Sbjct: 206 DDESLFSGEFWLGTQAAGLGLVDGLGDVRSILKARYGEEVRMPLVQSSSGLIPRRPGGFG 265 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGLWAV 290 S++S D M + + LW+ Sbjct: 266 AALAGSLASQAAD--GAMAAVEERALWSR 292 >gi|92118679|ref|YP_578408.1| peptidase S49 [Nitrobacter hamburgensis X14] gi|91801573|gb|ABE63948.1| peptidase S49 [Nitrobacter hamburgensis X14] Length = 293 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 12/222 (5%) Query: 33 DNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAG 83 P V + + G I L + +ER D+A A+ + ++SPGGS Sbjct: 19 SGKPVVPVVRLSGVIGAVTPLRPGMTLAGVAKTLERAFAVDNAKAVALLVNSPGGSPVQS 78 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 IF I+++ K PV+ V ++AAS GY+I+CA + IV +S++GSIGV+ Sbjct: 79 RQIFLRIRQLAQEKKLPVLVFVEDVAASGGYMIACAGDEIVCDPSSILGSIGVVGGSFGF 138 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + K+GV + + KA PF NP V ++ + + F+ LV SR Sbjct: 139 TELIGKIGVERRLYTAGEHKATLDPFLPENPDDVARLKAIQREIHATFIELVKTSRGARL 198 Query: 202 D-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + +L G W G + +GL D +G ++ + V Sbjct: 199 KGEDDLLFTGEYWAGERSVALGLADAIGDLRSTLRARFGDKV 240 >gi|329851486|ref|ZP_08266243.1| signal peptide peptidase SppA, 67K type [Asticcacaulis biprosthecum C19] gi|328840332|gb|EGF89904.1| signal peptide peptidase SppA, 67K type [Asticcacaulis biprosthecum C19] Length = 593 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 18/271 (6%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRD 63 +++ +S + + +A I G I S ++ E +D Sbjct: 274 VMSLADYSRTLAPDSKGETIAIIDGEGAIMTGKGGGGGFGSQKMMMSDDVSEAFYTAIKD 333 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIV 122 A++ +SSPGGS A I A++ K KPV+ + + AAS GY I+ ++ IV Sbjct: 334 PKVKAIVFRVSSPGGSDTASAQIAEAMKDAKEAGKPVVVSMGDYAASGGYWIASGASAIV 393 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSI-KSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A ++L GSIGV + L + GV I S +P + Sbjct: 394 ANPSTLTGSIGVFGGKFAIGDALARFGVDIKDIHVGGDYTEVFSEAKGFSPTQRAALSSW 453 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +D Y+ F+ V+ RN+P DK L+ GR+WTGA+A + L+D GG + +L Sbjct: 454 IDQIYNSFITHVAAGRNLPEDKVRELAKGRVWTGAQAVEHRLVDKAGGFYAAVDTAKSLA 513 Query: 242 VDQSIRKIKDWN-PPKNYWFCDLKNLSISSL 271 + +++ P K F + N SL Sbjct: 514 KIDASAQVRLVRYPSKPSMFGGVSNSVQMSL 544 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 87/218 (39%), Gaps = 7/218 (3%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVIT 101 + G + E++ + R + D A+ + L G S A E I AI V+ KPVI Sbjct: 64 LTGSTLSTVEVVTTLHRAADDPKVKAVFMRLPEGGMSPAAAEEIREAIIYVRRASKPVIA 123 Query: 102 EVHEMAASA----GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + S Y++ +S+ + S G+ + K DK G+S + + Sbjct: 124 HSQGLYPSGMVISSYMLGASSSELWMQPRSSFQVTGISSSEMFFKDAFDKYGISAQYEQR 183 Query: 158 SPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K +P+ ++ P+ + + S Y + ++ R + + + Sbjct: 184 AEFKNAVNPYLYNDFTPEHREATLSWMGSIYQSMIGNIASDRRLDKTVVQTTLEAGPYGA 243 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +A ++GLI +G + Q+ G + + + D++ Sbjct: 244 EKALELGLITHLGQVHDAEQAALKRGTNAKVMSLADYS 281 >gi|186475587|ref|YP_001857057.1| peptidase S49 [Burkholderia phymatum STM815] gi|184192046|gb|ACC70011.1| peptidase S49 [Burkholderia phymatum STM815] Length = 336 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 10/243 (4%) Query: 7 KIKTRYVMLSLVTLTV--VYFSWSSHVEDNSPHVARIAIRGQIE-----DSQELIERIER 59 +I R+V L ++ L V V + H A + + G+I +++++ + Sbjct: 52 RIFFRFVFLGVLVLIAWAVLDFSGEKVATSGRHTALVTLDGEIASDTNANAEDIDMALAN 111 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISC 116 D +++ +SPGGS I+R I++++ + P + V +M AS GY + Sbjct: 112 AFDDAGTAGVVLRCNSPGGSPVQAGIIYREIRRLRGKYPAIPLYVVVGDMCASGGYYAAA 171 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 A++ I + S+VGSIGVL +DKLG+ + S K PFS PK Sbjct: 172 AADKIYVDKASIVGSIGVLMDGFGFTGLMDKLGIQRRMRTSGENKGFYDPFSPDTPKMDS 231 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q ++D + F+ V + R + G WTG ++ ++GL D G V + Sbjct: 232 HAQVMLDEIHAQFIDAVKQGRGKRLQDNPDIFSGLFWTGEKSVELGLADGFGDTNYVARE 291 Query: 237 LYA 239 + Sbjct: 292 IIK 294 >gi|318605616|emb|CBY27114.1| putative protease sohB [Yersinia enterocolitica subsp. palearctica Y11] Length = 348 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKSGAVAAVKPCLYVIDFKGSI-DAHEVASLREEISAVLAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|238790408|ref|ZP_04634179.1| protease sohB [Yersinia frederiksenii ATCC 33641] gi|238721515|gb|EEQ13184.1| protease sohB [Yersinia frederiksenii ATCC 33641] Length = 335 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 77 AKAGAVATGKPCLYVIDFKGSI-DAHEVTSLREEISAVLAVATAQDEVLLRLESPGGVVH 135 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 136 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 195 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 196 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 253 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 254 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 287 >gi|256044114|ref|ZP_05447025.1| Na(+)/H(+) antiporter 1 / protease IV [Brucella melitensis bv. 1 str. Rev.1] gi|189029205|sp|Q8YFI5|NHAA_BRUME RecName: Full=Na(+)/H(+) antiporter nhaA; AltName: Full=Sodium/proton antiporter nhaA Length = 736 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 466 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 525 Query: 88 RAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + +K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 526 RRIRDLAAEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 585 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 586 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 645 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 646 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 700 Query: 266 LSISS 270 + + S Sbjct: 701 IGMDS 705 >gi|219886303|gb|ACL53526.1| unknown [Zea mays] Length = 565 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 16/261 (6%) Query: 31 VEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPG 77 ++ +A I G I +++LIE+I + + A+I+ + SPG Sbjct: 257 LQGGGEQIAIIRASGSITRTRSPLSAPSSGIVAEQLIEKIRTVRESEKYKAVILRIDSPG 316 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + ++R I+ + N KPV+ + ++AAS GY ++ A+ +IVA + +L GSIGV+ Sbjct: 317 GDALASDLMWREIRLLANSKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSIGVVTG 376 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ +++ + + + + + P ++ + ++Y F + S Sbjct: 377 KFCLQKLYERIDFNKEIISKGRYAELNVNDQRPLRPDEAELFEKSAQNAYALFRDKAAMS 436 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI--KDWNP 254 R++ D+ ++ GR+W+G +A GL+D VGG + +KI + + Sbjct: 437 RSMSVDQMESVAQGRVWSGHDAFSRGLVDSVGGLSQALAIAKQKANIPKDKKIQLVEVSK 496 Query: 255 PKNYWFCDLKNLSISSLLEDT 275 P L + S L D Sbjct: 497 PSPSLPEILSGIGGSLLGVDR 517 Score = 79.4 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 84/226 (37%), Gaps = 23/226 (10%) Query: 43 IRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAG-----EAI 86 +RG+I D ++ E + + D + + + + + I Sbjct: 20 LRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIE-----PLRCGWAKVDEI 74 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R I K + + Y ++CA + A ++ V G+ Q +++ L+ Sbjct: 75 RRHIVDFKKSGKFVVGYMPVCGEKEYYLACACGELYAPPSAYVALFGLTVQQTFLRGVLE 134 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+G+ + + K+ ++ + +M+ ++D+ Y ++ +S + ++ Sbjct: 135 KVGIEPEIQRIGKYKSAGDQLARKSMSNEVREMLAALLDNIYGNWLETISSTHGKKKEEI 194 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + ++ A K+ G + + +EV L + + ++ Sbjct: 195 EGFINSGVYQVARLKEEGWVTDLLYDDEVMTLLKERVGQKDKKSLR 240 >gi|323144007|ref|ZP_08078659.1| signal peptide peptidase SppA, 67K type [Succinatimonas hippei YIT 12066] gi|322416210|gb|EFY06892.1| signal peptide peptidase SppA, 67K type [Succinatimonas hippei YIT 12066] Length = 643 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 13/261 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGG 78 S+ + +A I GQI ++ + + DD A+++ ++SPGG Sbjct: 351 STPEKLKDKRIAVIYGIGQISGFSNDVYAFTPDNILPLLNEVRNDDKIKAVVMYINSPGG 410 Query: 79 SAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + A E I R + ++K K VI ++ AAS GY ++ A++ I+A ++L GSIGV Sbjct: 411 AVKASEEIRRELMRLKELGKKVIVSMNGTAASGGYWVASAADQIIADSSTLTGSIGVFSL 470 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 L+ +GV V + S + ++ + M+ V+ +Y F+ LV++SR Sbjct: 471 ALGAHDLLNHVGVYQDGVATHEFADA-SIANPLSENTKETMRLSVEHTYDTFINLVAKSR 529 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP-PK 256 + + ++G+++ G EA+ +GLID +G + + L +D ++ + + P+ Sbjct: 530 RLSPANYISYAEGQVFLGDEAQNLGLIDDLGSLNDALNTAAKL-IDSTLDDVSVLHLAPQ 588 Query: 257 NYWFCDLKNLSISSLLEDTIP 277 L I + E IP Sbjct: 589 GEKSISPLELFIMNKAEGIIP 609 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 90/221 (40%), Gaps = 16/221 (7%) Query: 53 LIERIERISRDDSATALIVSLS--SPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 + + + + D++ +I+ L+ SP S + I A+ KV+N K V + + S Sbjct: 129 IEKALNFAAEDNNLKLIILDLNDLSPM-SLAVAKRIGNAVDKVRNAGKEVTALAYSYSQS 187 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS- 168 A + I+ + I+ V G+ Y K L+ L V+ K+ K+ P++ Sbjct: 188 A-FAIAAHCDKILLDTMGQVNLRGIGMSSLYYKDLLNTLKVTPYIFKAGHFKSAVEPYTR 246 Query: 169 -EVNPKAVQMMQDVVDSSYHWF-----VRLVSESRNIPYDKTLVLSDGRIWTGAEA---K 219 +++P ++ + + + VR V + D + + ++ G A Sbjct: 247 NDMSPDVKAEYANLAANLWDEYIKELNVRKVLSRTIVLPDADKYVKELELYKGDTALMQL 306 Query: 220 KVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYW 259 + L+D + +E+ SL G D+S + + + Y Sbjct: 307 ENNLVDELISREDYLLSLCKDYGTDKSDTTLPNMINYRKYL 347 >gi|256112915|ref|ZP_05453828.1| Na(+)/H(+) antiporter 1 / protease IV [Brucella melitensis bv. 3 str. Ether] gi|265994355|ref|ZP_06106912.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 3 str. Ether] gi|262765468|gb|EEZ11257.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 3 str. Ether] Length = 736 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 466 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 525 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 526 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 585 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 586 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 645 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 646 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 700 Query: 266 LSISS 270 + + S Sbjct: 701 IGMDS 705 >gi|218549037|ref|YP_002382828.1| periplasmic protease [Escherichia fergusonii ATCC 35469] gi|218356578|emb|CAQ89201.1| putative inner membrane peptidase [Escherichia fergusonii ATCC 35469] Length = 349 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 8/215 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 + + P V + +G D+ E+ E I+ + ++V L SPGG + Sbjct: 93 GETLSSDKPRVWVLDFKGS-MDAHEVTALREEITAVLAVYKPQDQVVVRLESPGGVVHGY 151 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 152 GLAASQLQRLRDHNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQLPNFN 211 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 212 RFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHLLFKDFVKRMR--PSL 269 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A + GL+D + ++V L Sbjct: 270 DIDQVATGEHWYGQQALEKGLVDEINTSDDVILGL 304 >gi|329769509|ref|ZP_08260919.1| hypothetical protein HMPREF0433_00683 [Gemella sanguinis M325] gi|328838724|gb|EGF88322.1| hypothetical protein HMPREF0433_00683 [Gemella sanguinis M325] Length = 322 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 114/226 (50%), Gaps = 9/226 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQ-------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 S + +I++ G+I +I +I+ S D + A+++S+++PGG Y Sbjct: 58 GSGSEVIQKISVEGEIGSEMTNTYSRGSIINQIKVASADPNVKAILLSVNTPGGGVYETA 117 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ A++ + K V + + A S GY IS A+ I A + GSIGV+ Y + F Sbjct: 118 EIYNALKN--SGKDVYVAMKKQATSGGYYISMAAKKIYANSETTTGSIGVIMSYVSAQKF 175 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L++ G+ ++++S KA ++ ++ Q+ +Y FV+ ++E RN+ D+ Sbjct: 176 LNEHGIKQETIRSGDQKAIGGLAEDLPESTRKIYQEQNKEAYDRFVKAIAEGRNMSEDEV 235 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 L+DGR ++G +A + L+D +G ++E+ + + I+ Sbjct: 236 KKLADGRTYSGKQAVENKLVDKIGTEDELINLIKEEKNLSNPSVIE 281 >gi|157370899|ref|YP_001478888.1| putative periplasmic protease [Serratia proteamaculans 568] gi|157322663|gb|ABV41760.1| Peptidase S49 domain protein [Serratia proteamaculans 568] Length = 348 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + VE P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGAVEATKPCLYVLDFKGS-MDAHEVTSLREEISAVLAVATPQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 149 GYGLASSQLARLRTGGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNDTHELFKQFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GLID +G +++ Sbjct: 267 SLDIDSVATGEHWFGTQAKEKGLIDAIGTSDDLL 300 >gi|327399485|ref|YP_004340354.1| signal peptide peptidase SppA, 36K type [Hippea maritima DSM 10411] gi|327182114|gb|AEA34295.1| signal peptide peptidase SppA, 36K type [Hippea maritima DSM 10411] Length = 278 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 16/289 (5%) Query: 4 VLKKIKTRYVMLSLVTLTV--VYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIER 59 ++KK V+L+++ V VYF++ N P+VA ++I G I + I + + Sbjct: 1 MIKKATLAVVLLTIIVFIVSMVYFAF------NVPNVAVLSINGVINQKKTDNWIRALNK 54 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I R+ + A+++ + SPGG A + + ++ AI+ + KPV+ + + AS Y + ASN Sbjct: 55 IKRESNIKAVLLKIDSPGGEAVSSQRLYFAIKDLSKTKPVVCLIETIGASGAYYAASASN 114 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IV+ S++GSIGVLF+ V +LGV VKS +K +PF E + +M+ Sbjct: 115 KIVSYPASIIGSIGVLFETLNVAKLSKRLGVKAFVVKSGKLKDAGNPFREPTKEDEEMIN 174 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +VV+ Y+ F+ V+ RN+ K ++G I++G A K+GL+D GG ++ + + Sbjct: 175 NVVNDIYNQFLDDVARGRNMESQKLKRYANGSIFSGRLALKIGLVDSTGGLKDAKKYIKR 234 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 L I+KIK ++ + + L E+ I L+++ V+ ++ Sbjct: 235 LT---KIKKIKLYSFNRKP---STAGKLLKGLAENIIELLERPSVKAIY 277 >gi|291085291|ref|ZP_06352653.2| SohB protein, peptidase U7 family [Citrobacter youngae ATCC 29220] gi|291071517|gb|EFE09626.1| SohB protein, peptidase U7 family [Citrobacter youngae ATCC 29220] Length = 351 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 8/229 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 + P V + +G D+ E+ E ++ + ++V L SPGG + Sbjct: 95 GDSSSSDKPRVWVLDFKGS-MDAHEVSALREEVTAVLAVVKPQDQVVVRLESPGGVVHGY 153 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 154 GLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQIPNFN 213 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 214 RFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVQRMR--PAL 271 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++ G W G +A GL+D + +EV +L S+R I+ Sbjct: 272 DIEQVATGEHWFGQQALANGLVDEINTSDEVILALMEGREVLSVRYIQR 320 >gi|315498282|ref|YP_004087086.1| signal peptide peptidase sppa, 67k type [Asticcacaulis excentricus CB 48] gi|315416294|gb|ADU12935.1| signal peptide peptidase SppA, 67K type [Asticcacaulis excentricus CB 48] Length = 592 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 17/260 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSATALIVS 72 ++ V S +A I G I S ++ + +D A++ Sbjct: 286 ATTVSTGSQTIAVINGEGPIMTGKGSGGGFGSEAQMLSDDVAQAFYDAVENDKVKAIVFR 345 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 +SSPGGS A E I RA+ K KPV+ + + AAS GY +S ++ IVA T+L GS Sbjct: 346 VSSPGGSDTASEQISRALAYAKKSGKPVVVSMGDYAASGGYWVSAGASAIVANPTTLTGS 405 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 IGV + + GV + + S K Q + + +D+ Y+ F+ Sbjct: 406 IGVYGGKMAIGEAASRFGVDFRQIGVGSEYAGAYSAGKPFTDKQTQAISNWMDTIYNAFI 465 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 V+E R + ++ ++ GR+WTGA+AK++GL+D GG L K+K Sbjct: 466 GHVAEGRKLAPERVREIAKGRVWTGAQAKQLGLVDETGGFYAAVAKAKKLAKIGDDVKVK 525 Query: 251 DWNPPKNYWFCDLKNLSISS 270 N P N + + + Sbjct: 526 LVNYPNNKSPFAMFGKGVEA 545 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 103/262 (39%), Gaps = 19/262 (7%) Query: 3 FVLKKIKTRYVMLSLVTL---------TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL 53 FVL + ++++++V + + D + I G+ + ++ Sbjct: 15 FVLFFVGVPFLLITMVAAASKPTTPSAITLVVDLREGLTDQTRSDPFAFITGRPLSTMDI 74 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS--- 109 + + + D ++++ L G A + I A++ V+++ KPV + S Sbjct: 75 VTSLYHAADDSKVKSVLIRLPEGGLMPAAAQEIRTAVRYVRSKNKPVYAHSQGLYPSTMV 134 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 A Y + A+ S G+ + ++K DK G++ + + K +P+ Sbjct: 135 LASYTVGTAATEFWMQPRSSFQVTGIATEEMFLKRAFDKYGITPQFQQRYEYKNAVNPYL 194 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESR---NIPYDKTLVLSDGRIWTGAEAKKVGL 223 S+ P + + S Y + + R + K + + ++ +AK++GL Sbjct: 195 QSDFTPAHREATLSWMGSVYDSLINDAAIDRKDAKLDAGKLKSILEAGPYSAEQAKELGL 254 Query: 224 IDVVGGQEEVWQSLYALGVDQS 245 I +G +E+ ++ A G + Sbjct: 255 ITNLGQVQEIEEAAKAKGGADT 276 >gi|212223529|ref|YP_002306765.1| Hypothetical endopeptidase IV [Thermococcus onnurineus NA1] gi|212008486|gb|ACJ15868.1| Hypothetical endopeptidase IV [Thermococcus onnurineus NA1] Length = 335 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 117/241 (48%), Gaps = 4/241 (1%) Query: 30 HVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++ + + +A + I G I++ + +I + I+ +DS +++ + SPGG I+ Sbjct: 83 NLPEGNTTIAIVPIFGLIDEYTALSIIPVLRDIAGNDSIGGVVLWIESPGGYVGPVREIY 142 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++K+ KPV+ +AAS GY I+ + I+A + VGSIGV++ + ++ + Sbjct: 143 ATVKKLNLIKPVVAYTGGIAASGGYYIAVGAEEIIADPLAEVGSIGVIYVHYNLQQNYEM 202 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ ++ K+ P K + + + + M+ + VD+ + F++ VS R + ++T Sbjct: 203 NGIKVEVFKTGPYKDMGAEWRGLTEEEKAMITESVDTYFQAFLQAVSSGRGMSLNETKEY 262 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + GR W L+D G + + L + ++ + +I ++ + F + + Sbjct: 263 ATGRTWFAMN-VTGSLVDETGDLDYAVKVLGEM-LNVTNPRIVIYSGRSSSNFAIFGSTA 320 Query: 268 I 268 + Sbjct: 321 L 321 >gi|307730546|ref|YP_003907770.1| peptidase S49 [Burkholderia sp. CCGE1003] gi|307585081|gb|ADN58479.1| peptidase S49 [Burkholderia sp. CCGE1003] Length = 334 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 14/275 (5%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSL 73 + V+ + + H A IA+ G+I +++++ +E D +I+ Sbjct: 64 VIWAVFDFSGDKLAASGRHTALIALDGEISADTRANAEDVAAALESAFDDAGTAGVILRC 123 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVG 130 +SPGGS I+ +++++ + P + V +M AS GY + A + I + S+VG Sbjct: 124 NSPGGSPVQAGIIYDQMRRLRAKHPSIPLYVVVGDMCASGGYYAAAAGDKIYVDKASIVG 183 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGVL +DKLG+ + S K PFS PK Q Q+++D + F+ Sbjct: 184 SIGVLMDSFGFTGLMDKLGIQRRLHTSGENKGFYDPFSPETPKMDQHAQEMLDQIHAQFI 243 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 V + R +T + G WTG ++ ++GL D G V + L +I Sbjct: 244 EAVRQGRGKRLHETPDMFSGLFWTGEKSVELGLADGFGDANYVARELI------KAPEIV 297 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 D+ ++ + + L K+ Sbjct: 298 DYTVKESITDRVARKFGAAVGSGAVHALALGGKLN 332 >gi|254476437|ref|ZP_05089823.1| peptidase S49 [Ruegeria sp. R11] gi|214030680|gb|EEB71515.1| peptidase S49 [Ruegeria sp. R11] Length = 265 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 9/216 (4%) Query: 36 PHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P VA + ++G I + L +ER R A+ ++SPGGS I Sbjct: 12 PLVAVVRLQGAIGMAGRGALNDVTLAPVLERAFRKGKPAAVAFEINSPGGSPVQSALIGA 71 Query: 89 AIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ + P + V ++AAS GY ++ +++ I A ++S+VGSIGV+ L Sbjct: 72 RIRRLSQELKVPTLAFVEDVAASGGYWLAASADEIYADDSSVVGSIGVISAGFGAHVLLA 131 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + GV + + K+ PF NP+ V +++++ + F+ V + R + Sbjct: 132 RQGVERRVYTAGKSKSMLDPFRPENPEDVARLKELLGDIHENFITHVKDRRGDKLVQDQD 191 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G IW G A +GLID + Q+ + V Sbjct: 192 LFTGEIWLGRRAVSLGLIDGIDHLRPKLQARFGDKV 227 >gi|78187485|ref|YP_375528.1| protease IV [Chlorobium luteolum DSM 273] gi|78167387|gb|ABB24485.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium luteolum DSM 273] Length = 583 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 15/255 (5%) Query: 32 EDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPG 77 D +A I + G I D + IE +D A+++ + SPG Sbjct: 279 ADTKDRIALITLSGPIVRTTGEEALGLGSGVDVAAVRRSIEGALKDRRVKAMVLRIDSPG 338 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + + KP++ + +AAS GY+ + + I A S+ GSIGV Sbjct: 339 GDALASAEMLEMLDSAAVCKPLVVSMSGVAASGGYMAALSGRSIYAEPLSITGSIGVYAL 398 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P + + K+G+ V S + ++ +A + + Y FV V+ +R Sbjct: 399 KPEISGLVQKIGLGRSIVTRGRNADANSIYKPLDGEAYRKFVEASGEVYRDFVGKVARAR 458 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW-NPPK 256 + + L+ GR+WTG A +VGL+D GG + LG S R+ + P + Sbjct: 459 KMSPGRVDSLAGGRVWTGRRALEVGLVDRSGGLFDALGEAQRLGGIDSTRQPEIVCYPRE 518 Query: 257 NYWFCDLKNLSISSL 271 W L S++ Sbjct: 519 KSWLELLVRGDFSAI 533 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 15/206 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEM 106 Q+L+ + S D A+++ + G + + RAI++ + K VI +H Sbjct: 58 QDLLFTLHHASSDPRVDAVLLDID---GVRTTPSKISELRRAIERTRASGKRVIAFLHSP 114 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S ++ A + ++ E + G+ + Y L K+GVS ++ + K+ P Sbjct: 115 EDSDC-MLGAACDSVIVEEGGFMLLDGLRAETLYFATPLRKIGVSFQAAQWKRYKSGIEP 173 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG-RIWTGAEAKKVGL 223 F + +P+A + + ++D Y ++ VS R++ D + D + T EA ++GL Sbjct: 174 FVRTGPSPEAEEEVSVLLDEVYRDYIGYVSRRRHLSPDSLRSIIDNVTLMTSPEAVRLGL 233 Query: 224 IDVVGGQ----EEVWQSLYALGVDQS 245 D V E+ + L D Sbjct: 234 ADGVASSWRFHRELERRLTGKEPDPE 259 >gi|260563474|ref|ZP_05833960.1| Na+/H+ antiporter nhaA [Brucella melitensis bv. 1 str. 16M] gi|265990527|ref|ZP_06103084.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 1 str. Rev.1] gi|260153490|gb|EEW88582.1| Na+/H+ antiporter nhaA [Brucella melitensis bv. 1 str. 16M] gi|263001311|gb|EEZ13886.1| Na+/H+ antiporter NhaA [Brucella melitensis bv. 1 str. Rev.1] Length = 723 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 453 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 512 Query: 88 RAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + +K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 513 RRIRDLAAEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 572 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 573 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 632 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 633 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 687 Query: 266 LSISS 270 + + S Sbjct: 688 IGMDS 692 >gi|237731714|ref|ZP_04562195.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907253|gb|EEH93171.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 351 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 17/264 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 + P V + +G D+ E+ E ++ + ++V L SPGG + Sbjct: 95 GDSTSSDKPRVWVLDFKGS-MDAHEVSALREEVTAVLAVVKPQDQVVVRLESPGGVVHGY 153 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 154 GLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQIPNFN 213 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 214 RFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVHRMR--PTL 271 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G +A GL+D + +EV L + + ++ K Sbjct: 272 DIEQVATGEHWLGQQALANGLVDEINTSDEVILGLME---GREVLNVRYLQRKK------ 322 Query: 263 LKNLSISSLLEDTIPLMKQTKVQG 286 L + S E L+ + +G Sbjct: 323 LMDRFTGSAAESADRLLMRWWQRG 346 >gi|200390711|ref|ZP_03217322.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603156|gb|EDZ01702.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 348 Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ +++ F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHYLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|297622896|ref|YP_003704330.1| peptidase S49 [Truepera radiovictrix DSM 17093] gi|297164076|gb|ADI13787.1| peptidase S49 [Truepera radiovictrix DSM 17093] Length = 546 Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 22/247 (8%) Query: 25 FSWSSHVEDNSPHVARIAIRGQI-------------------EDSQELIERIERISRDDS 65 F + S VA I + G I ++ L+ DD Sbjct: 261 FFPAPLPPLRSRKVAVITLEGAIVTGRSRRLPLPLPLVGGKQAGAETLLRAFRAAEADDG 320 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A++ ++S GGSA A + I+R + +++ +KPV+ + E+AAS G+ + ++ ++A Sbjct: 321 VAAVVFYVNSGGGSALASDLIWREVVRLRRKKPVVAVMGEVAASGGFYVLTHADHVIAGA 380 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 T+L GSIGVL ++ F + G ++++ SP + + Sbjct: 381 TTLTGSIGVLTGKFVLEEFNRRYGFHPEAIRRGRFALAMSPAHPFTDDERALQARAIAEV 440 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE---EVWQSLYALGV 242 Y F V+ R +P + L+ GR+WTG +A+ GL+D +G + + L Sbjct: 441 YARFTERVAAGRKLPLGRVEELAGGRVWTGRDAQARGLVDELGDVALGVARAREMAGLRE 500 Query: 243 DQSIRKI 249 D + + Sbjct: 501 DAPVWNV 507 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 81/191 (42%), Gaps = 6/191 (3%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG--EAIFRAIQKVKNRKPVITEVHE 105 +EL ++ER+++ ++ + G + EA+ + +++ + Sbjct: 60 MSLEELTAQLERLAQAPWLKGVLFRVE--GLTVGGATAEALRALVTRLRQAGKRTSCYLT 117 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y ++ A++ +V E++ + G+ + +++ L + G++ + + K Sbjct: 118 RLDLLSYFVASAADEVVLPESAELSVFGLALETTFMRDALARYGIAFEKLALRDYKTAGD 177 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 E++P + +++S V ++ SR + D D + + + A ++G+ Sbjct: 178 TLARQEMSPAQREQYGRLLESLEATLVEAIASSRGVAADTVRAWFDEGVTSASRALELGM 237 Query: 224 IDVVGGQEEVW 234 ID V ++E+ Sbjct: 238 IDRVAYEDELI 248 >gi|332161870|ref|YP_004298447.1| putative periplasmic protease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666100|gb|ADZ42744.1| putative periplasmic protease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 348 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKSGAVAAVKPCLYVIDFKGSI-DAHEVASLREEISAVLAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|270262110|ref|ZP_06190382.1| hypothetical protein SOD_b03170 [Serratia odorifera 4Rx13] gi|270043986|gb|EFA17078.1| hypothetical protein SOD_b03170 [Serratia odorifera 4Rx13] Length = 348 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + VE P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGAVEATKPCLYVLDFKGS-MDAHEVTSLREEISAVLAVATPQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 149 GYGLASSQLARLRTGGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGQFKRTLTLFGENTEQGREKFREDLNETHELFKEFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G++AK+ GLID +G +++ Sbjct: 267 SLDIDSVATGEHWFGSQAKEKGLIDAIGTSDDLL 300 >gi|317048300|ref|YP_004115948.1| peptidase S49 domain-containing protein [Pantoea sp. At-9b] gi|316949917|gb|ADU69392.1| Peptidase S49 domain protein [Pantoea sp. At-9b] Length = 348 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 101/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S E P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKSGVTETEKPTLYVLEFKGS-MDAGEVSSLREEISAVLAVATPGDEVLLKLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q++++ + V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 149 GYGLAASQLQRLRDAGLTLTAAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L + + ++ + K + F E + + ++ ++ ++ F V + R P Sbjct: 209 FNRLLKRNDIDVELHTAGQYKRTLTLFGENTDEGREKFREDLNETHLLFKDFVHQMR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A ++GL+D +G + + Sbjct: 267 TLDVEKVATGEHWYGRQALELGLVDEIGTSDALI 300 >gi|161503176|ref|YP_001570288.1| putative periplasmic protease [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864523|gb|ABX21146.1| hypothetical protein SARI_01244 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 363 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 12/217 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSAY 81 + P V I +G ++ + + + A++ L SPGG + Sbjct: 107 GDIATADKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVVH 163 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q+++++ P+ V ++AAS GY+++C + IVAA ++VGSIGV+ Q P Sbjct: 164 GYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIVAAPFAIVGSIGVVAQIPN 223 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 FL + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 224 FNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVQRMR--P 281 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A K GL+D + +EV L Sbjct: 282 TLDIEQVATGEHWYGQQALKKGLVDEINTSDEVILGL 318 >gi|332527653|ref|ZP_08403699.1| protease IV [Rubrivivax benzoatilyticus JA2] gi|332112056|gb|EGJ12032.1| protease IV [Rubrivivax benzoatilyticus JA2] Length = 604 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 10/196 (5%) Query: 44 RGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 G I D + + R DD+ A+++ ++SPGGSA+ E I R ++ + Sbjct: 318 EGMIVDGEAAPGTVGGLSTAALVRRARDDDAVRAIVLRVNSPGGSAFGSELIRRELELAR 377 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 KPV+ + ++AAS G+ IS +++ IVA ++ GSIGV+ P + L++LG+ + Sbjct: 378 AAGKPVVVSMGDVAASGGFWISTSADEIVADPATITGSIGVIAVLPTAERALERLGLHTE 437 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++S P + ++ + Q++Q + Y F+ V+ +R ++ + GR+W Sbjct: 438 GYRTSWAVDAYDPRAPLDARTEQVLQSSIGHVYGQFLERVATARKTTPERIDEIGQGRVW 497 Query: 214 TGAEAKKVGLIDVVGG 229 +GA+A+ GL+D GG Sbjct: 498 SGAQARVRGLVDRTGG 513 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 19/206 (9%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAAS 109 ++L+ ++ + D T+ ++ L G+ + A+ + + + Sbjct: 83 RDLLTALDAGATDARITSALLVLDDFAGAGLPTLREVAAAVDRFRAGGKKVVAWGSSYDQ 142 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ ++ + + G + Y K LD+LGV+ V++ K Sbjct: 143 RQYYLAAHADEVWLHPMGGIEISGYGGRRTYFKDALDQLGVTAHVVRAGRFKNAAETLAA 202 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP--------YDKTLVLSDGRIWTGAEAK 219 S +P+ Q +++ D + + + +R +P + L+ G +A Sbjct: 203 SGPSPETEQADRELYDGLWADYAATIEHARRLPAGSLSRAIAELPERLAAA----GGDAA 258 Query: 220 KV----GLIDVVGGQEEVWQSLYALG 241 K+ GLID + ++++ +L A G Sbjct: 259 KLAAREGLIDAMKTRDQMRAALIARG 284 >gi|269127810|ref|YP_003301180.1| signal peptide peptidase SppA, 67K type [Thermomonospora curvata DSM 43183] gi|268312768|gb|ACY99142.1| signal peptide peptidase SppA, 67K type [Thermomonospora curvata DSM 43183] Length = 570 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 1/183 (0%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITE 102 +G S + RD+ A++ ++SPGGSA A +AI+R + + KPVI Sbjct: 306 QGPAMGSDTIGAAFRAAVRDERIKAIVFRVNSPGGSAVASDAIWREVVLARRAGKPVIVS 365 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++AAS GY ++ A+++IVA ++ GSIGV+ + L+++GV + SV Sbjct: 366 MGDVAASGGYYVAMAADVIVAQPGTITGSIGVVTGKAVLSGLLERIGVGMGSVTDGEHAL 425 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S + +P + + +D Y F V+E R + + L+ GR+WTGA+AK+ G Sbjct: 426 MYSAIKDFSPSEWERINASLDHIYENFTAKVAEGRGLSRRRVEELARGRVWTGADAKEHG 485 Query: 223 LID 225 L+D Sbjct: 486 LVD 488 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 12/226 (5%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSA--YAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +++++ + + D ALIV + GG+ + + A+ ++ + E Sbjct: 53 RDVLDGLRKARGDARVRALIVRV---GGTIGLAMAQELRDAVTALRQAGKLTVAWSETFG 109 Query: 109 SA-----GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 Y ++ A + + T VG GV + P+++ L+K G+ + K Sbjct: 110 EGRQGNVPYYLASAFDRVYLQPTGEVGLTGVALEEPFLRGALEKAGIEPRFAARHEYKTV 169 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + F P+ + Q +VDS+ +++ R + ++ L D AEA + Sbjct: 170 ANMFMERAYTPEHRESSQRLVDSAGRQLAEGIAQGRGLTVERVRELIDRGPLLAAEALEA 229 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 GL+D + ++EV+ + R + N ++L Sbjct: 230 GLVDRLAYRDEVYAEVREKVGGPDGRVQLRYVSRYNRTHGLAEHLP 275 >gi|225166403|ref|ZP_03728068.1| 4-phytase [Opitutaceae bacterium TAV2] gi|224799357|gb|EEG17919.1| 4-phytase [Opitutaceae bacterium TAV2] Length = 512 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 9/195 (4%) Query: 32 EDNSPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 +N +A + G+I D I + DD A+++ ++SPGGSA A Sbjct: 318 SNNGARLAIVYAEGEIVDGEGEIGVVGGDAFSREIRALRLDDDIAAIVLRVNSPGGSASA 377 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I R +Q KPV+ + AAS GY I+ + I A T++ GSIGV V+ Sbjct: 378 SEHILRELQLAAEVKPVVVSMGNYAASGGYWIALSGGRIFAEPTTITGSIGVFGLQFDVQ 437 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + GV+ VK+ + P + + Q +VD +Y F++ VS +R++ Sbjct: 438 KLANTHGVTWDGVKTGRYAGAFTLTRPKTPAEMAIFQRLVDWTYAEFIKRVSTARSLEPA 497 Query: 203 KTLVLSDGRIWTGAE 217 + ++ GR+W+G + Sbjct: 498 RVQEIAQGRVWSGLD 512 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 88/218 (40%), Gaps = 26/218 (11%) Query: 53 LIERIERISRDDSATALIVSLSSPG-------GSAYAG-EAIFRAIQKVKNR-KPVITEV 103 L + I + D L ++ G G+ +A + A+ + + KP+ Sbjct: 87 LTKAIRTAATDKRIRGLYLT----GHFAPDGYGTGFASLREVRAALAEFRAANKPIRAWF 142 Query: 104 HEMAASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 S G Y + + + L+ G+ Q + L+K GV ++ +S Sbjct: 143 D----SPGTLEYYLGSTATELALDPFGLIEMPGLASQPMFFAGALEKYGVGVQVTRSGKY 198 Query: 161 KAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV---LSDGRIWTG 215 K+ PF+ +++P++ + +Q ++D + V V+++R +P TL +G I T Sbjct: 199 KSAVEPFTRADLSPESREQLQKLLDDLWTTIVAEVTDTRQLPAPDTLQKLVDKEGLI-TP 257 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 A GLI + ++E+ L + ++ + Sbjct: 258 QAALDAGLIHRIAYRDEILAELQDATGEDALTPFTQID 295 >gi|242062658|ref|XP_002452618.1| hypothetical protein SORBIDRAFT_04g029200 [Sorghum bicolor] gi|241932449|gb|EES05594.1| hypothetical protein SORBIDRAFT_04g029200 [Sorghum bicolor] Length = 672 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 16/261 (6%) Query: 31 VEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPG 77 ++ +A I G I +++LIE+I + + A+I+ + SPG Sbjct: 364 LQGGGEQIAIIRASGSITRTRSPLSAPGSGIIAEQLIEKIRTVRESEKYKAVILRIDSPG 423 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + ++R I+ + N KPV+ + ++AAS GY ++ A+ +IVA + +L GSIGV+ Sbjct: 424 GDALASDLMWREIRLLANSKPVVASMSDVAASGGYYMAMAAPVIVAEKLTLTGSIGVVTG 483 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++ F +++ + + + + + P ++ + ++Y F + S Sbjct: 484 KFCLQKFYERIDFNKEILSKGRYAELNAADQRPLRPDEAELFEKSAQNAYALFRDKAAMS 543 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI--KDWNP 254 R++ D+ +++ GR+W+G +A GL+D VGG + +KI + + Sbjct: 544 RSMSVDQMEIVAQGRVWSGHDAFSRGLVDSVGGLSQALAIAKQKANIPKDKKIQLVEVSK 603 Query: 255 PKNYWFCDLKNLSISSLLEDT 275 P L + S L D Sbjct: 604 PSPSLPEILSGIGGSLLGVDR 624 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 83/226 (36%), Gaps = 23/226 (10%) Query: 43 IRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAG-----EAI 86 +RG+I D ++ E + + D + + + + + I Sbjct: 127 LRGEISDQLKTRFSSGLSLPQICENFVKAAYDPRISGIYLHIE-----PLRCGWAKVDEI 181 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 R I K + + Y ++CA + A ++ V G+ +++ L+ Sbjct: 182 RRHIVDFKKSGKFVVGYMPVCGEKEYYLACACGELYAPPSAYVALFGLTVGQTFLRGVLE 241 Query: 147 KLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K+G+ + + K+ ++ + +M+ ++D+ Y ++ +S + ++ Sbjct: 242 KVGIEPEIQRIGKYKSAGDQLARKSMSNEVREMLATLLDNIYGNWLETISSTLGKKKEEI 301 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + ++ A K+ G I + +EV L + + ++ Sbjct: 302 EGFINSGVYQVARLKEEGWITDLLYDDEVMTLLKERVGQKDKKSLR 347 >gi|300723345|ref|YP_003712648.1| putative peptidase [Xenorhabdus nematophila ATCC 19061] gi|297629865|emb|CBJ90483.1| putative peptidase [Xenorhabdus nematophila ATCC 19061] Length = 348 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 6/204 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 P++ + +G ++ + L E I I D +++ L SPGG + + Sbjct: 99 KPNLYVLDFKGSMDAHEVDSLREEISAILAVADKKDEVLLRLESPGGMVHGYGLAASQLT 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + L K + Sbjct: 159 RLRQKGIRLTVVVDKVAASGGYMMACVADRIIAAPFAIIGSIGVVAQLPNIHRLLKKNDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + Q+ ++ ++ F + + R P ++ G Sbjct: 219 DVELHTAGEYKRTLTMFGENTEQGRKKFQEDLNETHKLFKSFIYQHR--PSLDVESVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK+ GLID VG ++ Sbjct: 277 EYWYGTQAKEHGLIDEVGVSDDFL 300 >gi|163745636|ref|ZP_02152996.1| peptidase, family S49, putative [Oceanibulbus indolifex HEL-45] gi|161382454|gb|EDQ06863.1| peptidase, family S49, putative [Oceanibulbus indolifex HEL-45] Length = 244 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 2/197 (1%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLI 114 IER A+ + ++SPGGS I I+++ K PVI V ++AAS GY + Sbjct: 19 IERAFAKGKPAAVALEINSPGGSPVQSSLIGARIRRLSEEKNIPVIAFVEDVAASGGYWL 78 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I A +S+VGSIGV+ V F+ + GV + + K+ PF NP+ Sbjct: 79 AAAADEIYADPSSVVGSIGVISASFGVHEFIREHGVERRVYTAGQSKSMLDPFRPENPED 138 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 V ++ +++ + F+ V R + L G IW A ++GLID +G + + Sbjct: 139 VARLKVLLEDIHENFIGHVKTRRAGKLPEGQDLFTGEIWLAKRAAELGLIDGIGHLKPLL 198 Query: 235 QSLYALGVDQSIRKIKD 251 + + V +K Sbjct: 199 KERFGEKVKLRRYGVKR 215 >gi|221068706|ref|ZP_03544811.1| peptidase S49 [Comamonas testosteroni KF-1] gi|220713729|gb|EED69097.1| peptidase S49 [Comamonas testosteroni KF-1] Length = 348 Score = 211 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 14/266 (5%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGG 78 +F ++ SPH A + I+G+I + ++ + D + A+++ ++SPGG Sbjct: 85 FFKDTATKTSTSPHTAVVEIKGEIASGADASAEFVVAAMRSAFEDSGSRAVVLLINSPGG 144 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S I + ++K + KP+ V E ASA Y I+ A++ I + S+VGSIGVL Sbjct: 145 SPVQAGIINDEMTRLKAKYNKPLYAVVEESCASAAYYIAAAADEIFVDKASIVGSIGVLM 204 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +DK+GV + + + K PFS ++ + + +++ + F+ +V Sbjct: 205 DGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSSQQKEFALQMLEQIHQQFIGVVKAG 264 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R ++ + G WTG +A ++GL D +G + V + + ++ D+ + Sbjct: 265 RGDRLHESPEMFSGLFWTGQQAVELGLADKLGSLDYVAREVV------KAEEVIDYT-RR 317 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQT 282 + L +++ E ++ M+ Sbjct: 318 DNVAERLAKRFGAAIGEGSVKAMRGL 343 >gi|312882440|ref|ZP_07742181.1| putative periplasmic protease [Vibrio caribbenthicus ATCC BAA-2122] gi|309369840|gb|EFP97351.1| putative periplasmic protease [Vibrio caribbenthicus ATCC BAA-2122] Length = 353 Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 10/213 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ED +PH+ + +G I+ + E I I +++D +++ L S GG + Sbjct: 100 AEDRAPHLFVLDFKGSIDAKEVSSLREEITAILAVAKDSD--EVLLRLESGGGMVHGYGL 157 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 158 ASSQLDRIKAANIPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQMPNFNKV 217 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E KA + ++ ++ F + + R P + Sbjct: 218 LKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHGLFKDFIRQRR--PDLEL 275 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GL+D + +++ Sbjct: 276 EKVATGEHWFGTQAHELGLVDEIKTSDDLVVEA 308 >gi|194444766|ref|YP_002040970.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403429|gb|ACF63651.1| putative signal peptide peptidase SppA, 36K type [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 348 Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVVKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 305 >gi|325283414|ref|YP_004255955.1| peptidase S49 [Deinococcus proteolyticus MRP] gi|324315223|gb|ADY26338.1| peptidase S49 [Deinococcus proteolyticus MRP] Length = 534 Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 22/244 (9%) Query: 31 VEDNSPHVARIAIRGQI-------------------EDSQELIERIERISRDDSATALIV 71 + VA +++ G I S ++ + D + A+++ Sbjct: 254 ASSKAGRVAVVSVEGNIVTGPSRHNPLPLPLTGGPSAGSDTVVAALRHAKEDRTTAAIVL 313 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++S GGSA A + I+R +Q + KPV+ + AAS GY + A++ ++A+ S+ GS Sbjct: 314 YVNSGGGSALASDLIWREVQ--TSEKPVVAVMGAFAASGGYYVLAAADRVIASPYSMTGS 371 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ P + F + G++ + + + + ++ + +Y FV Sbjct: 372 IGVVAGRPITEEFNRRHGLNPEQLGR-EEALMFHSSHPLTERQRDYLRRAIAETYARFVD 430 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V++ R + ++ L GRIW+GA+A + GL+D +G Q L + + Sbjct: 431 RVAQGRGLSTEQVDELGRGRIWSGADALERGLVDELGDLHTAVQRAKELTGLPYSAPVWN 490 Query: 252 WNPP 255 P Sbjct: 491 AGPK 494 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 95/196 (48%), Gaps = 23/196 (11%) Query: 51 QELIERIERISRDDSATALIVSLSSPGG----SAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + L ER++R++R + ++V G SA A AI + ++ K V+ + ++ Sbjct: 51 EALEERLDRLARAEWLHGVLVRF----GELKLSAAAARAIQGMLSRLAAEKRVVAYLPQV 106 Query: 107 ------AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 AAS ++ +VA E++ +G G + Y+ FL K G+ ++++ Sbjct: 107 NMTTLLAASG-------ASELVAPESAEMGLHGFGLEQLYLGDFLKKHGIGFENLRIREY 159 Query: 161 KAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 K+ +PFS E++ + +QD +DS + +V+ V++ R + + +G + +A Sbjct: 160 KSALTPFSDSEMDGANREQLQDYLDSCENAWVQDVAQGRGLSEAQVRGWIEGGVTGARQA 219 Query: 219 KKVGLIDVVGGQEEVW 234 + G++ V ++E+ Sbjct: 220 LEAGILTGVAYEDELL 235 >gi|227326049|ref|ZP_03830073.1| putative periplasmic protease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 348 Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 6/204 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQ 91 P + + G ++ + L E I + +++ L SPGG + +Q Sbjct: 99 KPCLYVLDFNGSMDAGEVSSLREEISAVLAVAKPKDEVLLRLESPGGVVHGYGLAASQLQ 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L + Sbjct: 159 RLRQGGVRLTVSVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNFHRLLKNKDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + ++ ++ ++ F V + R P ++ G Sbjct: 219 DVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHTLFKDFVQQMR--PSLDIDSVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK +GL+D +G +++ Sbjct: 277 EHWFGTQAKDLGLVDAIGTSDDLL 300 >gi|306842302|ref|ZP_07474963.1| Clp protease [Brucella sp. BO2] gi|306287581|gb|EFM59035.1| Clp protease [Brucella sp. BO2] Length = 255 Score = 211 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 7/216 (3%) Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVITEVHEMAASAGYLI 114 +E+ D A A+ +S++SPGG+ I+R I+ + ++K V V ++AAS GY+I Sbjct: 14 LEKAFADKHAPAVAISINSPGGAPVQSRLIYRRIRDLAVEHQKKVFVFVEDVAASGGYMI 73 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A + I+A +S+VGSIGV+ L K+GV + + K PF + Sbjct: 74 ALAGDEIIADPSSIVGSIGVVSASFGFPELLKKIGVERRVHTAGSNKVTLDPFQPEKAED 133 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ ++ + + F+ +V E R L G WTG A +GLID +G Sbjct: 134 IERLKALQLEIHATFIDMVKERRAGKLGDNPDLFSGLFWTGTTAASLGLIDGLGDMRSFL 193 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 + Y V K+K P + L + ++S Sbjct: 194 RKTYGDKV-----KLKLIQPQRGLLGRKLPGIGMNS 224 >gi|91793823|ref|YP_563474.1| putative periplasmic protease [Shewanella denitrificans OS217] gi|91715825|gb|ABE55751.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Shewanella denitrificans OS217] Length = 337 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 14/256 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 E V I +G I+ ++ E I I I+ D +IV++ S GG + Sbjct: 85 QDEVKQATVFVIDFKGSIDANEVSSLREEITAILTIAEADD--EVIVNVESGGGMVHGYG 142 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++ + ++AAS GY+++C +N I AA ++VGSIGV+ Q P Sbjct: 143 LAASQLDRLRQANIKFSVCIDKVAASGGYMMACVANKIYAAPFAIVGSIGVVAQLPNFHR 202 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + K + F + + Q ++ ++ F V + R P Sbjct: 203 LLQKHDIDYEQHTAGDFKRTLTLFGQNTQEGRDKFQQELEETHVLFKSFVGQYR--PEMD 260 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK-NYWFCD 262 ++ G W G +A ++GLID + ++V L L + + K+K K + Sbjct: 261 IAKVATGEHWYGQQAIELGLIDAISTSDDV---LLNLAKEHRVIKVKYQIKKKLSDKLAH 317 Query: 263 LKNLSISSLLEDTIPL 278 +LS+SS++ + + Sbjct: 318 GVSLSVSSIVNRLMEI 333 >gi|225455748|ref|XP_002268894.1| PREDICTED: similar to SPPA (signal peptide peptidase); protease IV/ serine-type endopeptidase [Vitis vinifera] Length = 686 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSL 73 W+ + +A I G I S++ IE+I + A+I+ + Sbjct: 375 WTLGLSGGKDQIAVIRASGSISRVRSPFSIPGSGITSEQFIEKIRSVRDSKRYKAVIIRI 434 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ + IVA +L GSIG Sbjct: 435 DSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGTIVAENLTLTGSIG 494 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + + + + P ++ ++Y F Sbjct: 495 VVTGKFNLGTLYEKIGFNKEIISRGRFAELTAAEQRPFRPDEAELFAKSAQNAYKQFRDK 554 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + SR++ DK + GR+WTG +A GL+D +GG R + Sbjct: 555 AAFSRSMAVDKMEENAQGRVWTGKDAASRGLVDAIGGLSRAVAIAKQKADIPQDRPV 611 Score = 82.5 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 94/264 (35%), Gaps = 23/264 (8%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS----------- 50 +F K++ + + + + + V + +RGQI D Sbjct: 105 DFEFKEMSGWMSFVVKLRMLIAF----PWERVRKGSVFTMKLRGQISDQLKSRFSSGLSL 160 Query: 51 QELIERIERISRDDSATALIVSLS--SPG-GSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ E + + D + + + + S G G E I R I K I Sbjct: 161 PQICENFIKAAYDPRISGIYLHIEPLSCGWGKV---EEIRRHILDFKKSGKFIVAYAPAC 217 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y + A + + A ++ G+ Q ++ +K+G+ + + K+ Sbjct: 218 GEKEYYLGSACDELYAPPSAYFSLYGLTVQASFLGGVFEKVGIEPQVQRIGKYKSAGDQL 277 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ + +M+ ++D+ Y ++ +S ++ + T + ++ + K+ G I Sbjct: 278 TRKTMSEENCEMLTALLDNIYGNWLDKISSAKGKKREDTENFINEGVYQVEKLKEEGWIT 337 Query: 226 VVGGQEEVWQSLYALGVDQSIRKI 249 + +EV L + + Sbjct: 338 NINYDDEVISILKERLGQPKDKNL 361 >gi|118590806|ref|ZP_01548207.1| putative protease protein [Stappia aggregata IAM 12614] gi|118436782|gb|EAV43422.1| putative protease protein [Stappia aggregata IAM 12614] Length = 285 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 11/225 (4%) Query: 33 DNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATALIVSLSSPGGSAYAG 83 ++ P + + + G I + E+ A A+ + ++SPGGS Sbjct: 15 NDKPVIPVVRLSGAIGGGGPFRSGLSLATASIPLEKAFSMKKAPAVALVINSPGGSPVQS 74 Query: 84 EAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 IF+ I+ + K V+ V ++AAS GY+I+ A + I +S+VGSIGV+ Sbjct: 75 RLIFKRIRDLAKENEKDVLVFVEDVAASGGYMIALAGDEIFVDPSSIVGSIGVVAAGFGF 134 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + K+GV + + K PF P+ ++ ++ + + F+ +V R Sbjct: 135 TEMIKKIGVDRRVYTAGEKKVTLDPFQPEVPEDIEYIKSLQLEIHETFIDMVKSRRGDVL 194 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 L G+ WTG ++GL+D +G V + + + + Sbjct: 195 SNDPDLFSGKFWTGRTGVELGLVDAIGDLRGVIKERFGDKAEPKL 239 >gi|317051372|ref|YP_004112488.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] gi|316946456|gb|ADU65932.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum S5] Length = 277 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 111/234 (47%), Gaps = 3/234 (1%) Query: 6 KKIKTRYVMLSLVTLT-VVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 K IK ++L ++ +T V S + PH+ + + G + D + ++ +R+ Sbjct: 3 KFIKWFLILLVIIFVTSAVISSMDRQKKLKEPHIGLVTLEGILYDIDFVSGALDDFARNP 62 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 T ++V ++SPGG + ++ I+ KPV +AAS + ++ I Sbjct: 63 MITGVLVRVNSPGGVVTPSQELYSLIRHY--PKPVWAFHDGLAASGALFATIGADRIGTQ 120 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 T++ GSIGV+ + + +K+G+ +VK+ P K S + +++++++ Sbjct: 121 STTITGSIGVIIRSINARELYEKIGIEEITVKTGPFKNILSTNQPLGDDERRILEELIGD 180 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 SY FV ++ SR++ + ++DGRI++G A + GL D + E Sbjct: 181 SYDEFVNAIASSRDMDKQLLIDIADGRIFSGLRAVEYGLADEISSYHEFRNKFA 234 >gi|157145601|ref|YP_001452920.1| putative periplasmic protease [Citrobacter koseri ATCC BAA-895] gi|157082806|gb|ABV12484.1| hypothetical protein CKO_01347 [Citrobacter koseri ATCC BAA-895] Length = 351 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 10/216 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + P + +G ++ + E + + + ++V L SPGG + Sbjct: 95 GENAATGKPRAWVLDFKGSMDAHEVSALREEVTAVLAAFKPQDQ--VVVRLESPGGVVHG 152 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q++++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 153 YGLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQIPNF 212 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL + I+ + K + E + Q ++ ++ ++H F V + R P Sbjct: 213 NRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKHFVQQMR--PV 270 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A + GL+D + ++V L Sbjct: 271 LDIEQVATGEHWYGQQALEKGLVDEINTSDDVILRL 306 >gi|283785434|ref|YP_003365299.1| protease [Citrobacter rodentium ICC168] gi|282948888|emb|CBG88490.1| probable protease [Citrobacter rodentium ICC168] Length = 348 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 8/215 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 + + ++P V + +G D+ E+ E ++ + ++V L SPGG + Sbjct: 92 AENSATDTPRVWVLDFKGS-MDAHEVNALREEVTAVLAVVKPQDQVVVRLESPGGVVHGY 150 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q+++++ P+ V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P Sbjct: 151 GLAASQLQRLRDKNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPNFN 210 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + Q ++ ++ ++ F V R P Sbjct: 211 RFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHQLFKAFVHRMR--PKL 268 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V++ G W G +A + GLID + +EV +L Sbjct: 269 DIEVVATGEHWYGQQALEKGLIDEINTSDEVILNL 303 >gi|256256945|ref|ZP_05462481.1| Clp protease [Brucella abortus bv. 9 str. C68] Length = 736 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 466 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQLRLIY 525 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 526 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 585 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + K PF + ++ ++ + + F+ +V E R Sbjct: 586 KKIGVERHVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 645 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 646 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 700 Query: 266 LSISS 270 + + S Sbjct: 701 IGMDS 705 >gi|189184683|ref|YP_001938468.1| SohB protease [Orientia tsutsugamushi str. Ikeda] gi|189181454|dbj|BAG41234.1| SohB protease [Orientia tsutsugamushi str. Ikeda] Length = 305 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 14/263 (5%) Query: 33 DNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +N V+ I + G I L IE+ TA+ + ++SPGGS Sbjct: 37 NNKSVVSVIHLTGIIGKVGSFKSGLTLHTLNSVIEKAFSFKKLTAVCLVVNSPGGSPVQS 96 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I I ++ N+K PV + V ++AAS GY ++CA I A+++S++GSIGV++ + Sbjct: 97 ELIASRILQLSNQKNVPVYSFVEDVAASGGYWLACAGKKIYASKSSIIGSIGVIYMGFGL 156 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + KLG+ + S K+ PF ++++Q++ ++ F+ + R Sbjct: 157 HEAIGKLGIKRRVYTSGNNKSILDPFMPEKDSDIKIIQNLQKKIHNHFISYIKSRRGDKI 216 Query: 202 DKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + + +G W+G +A + GLID + + Y + K + Sbjct: 217 TQEDKVIYNGEFWSGEQALEYGLIDGINDMYSFLNTKYGDSIKIEYVSTKQSWIKRK--L 274 Query: 261 CDLKNLSISSLLEDTIPLMKQTK 283 + ++ SL++ T+ ++ Sbjct: 275 GLIIDIGADSLVQKTLKAIEHNA 297 >gi|149197052|ref|ZP_01874104.1| protease IV [Lentisphaera araneosa HTCC2155] gi|149139598|gb|EDM27999.1| protease IV [Lentisphaera araneosa HTCC2155] Length = 587 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 6/268 (2%) Query: 28 SSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + N+ +A + + G I+ + L I R S++D A+++ ++SPGGSA A E Sbjct: 279 APKKKSNNDILALVNLDGTIDTRMGEALRRYIMRASQNDKVKAMVLRINSPGGSALASEM 338 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +A ++ K K + + +AAS GY + I A ++ GSIGVL + Sbjct: 339 ICQATEEFKKTGKTFVVSMSNVAASGGYYSAVFGEPIYAESATITGSIGVLGGKLVMSKM 398 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 DK+G+S K S S N + + ++ Y F + + R Sbjct: 399 FDKIGISTHEFKIGKYSDINSSTSFFNEDQRAKITESMNRVYDVFKGRIIQGREGKLKGD 458 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ GR++TG +AK++GL+D +GG E + R + P + + L Sbjct: 459 LEAMAGGRVYTGLQAKELGLVDKIGGLREAINDAKEQAGLK--RYSLETFPKQLSFEEML 516 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAVW 291 ED V+ + + W Sbjct: 517 MESFRPQEKEDEFVSYDPITVKSMNSAW 544 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 86/245 (35%), Gaps = 15/245 (6%) Query: 53 LIERIERISRDDSATALIVSLSSPGGS---AYAGEAIFRAIQKVKNR-KPVITEVHEMA- 107 L+ + D A+++ G + + R I ++K K V H + Sbjct: 55 LLSCLNYCVSKDDVKAVVLYAE---GMRLGLAQKQELLRRIHEIKKAGKKVYLYTHGLDE 111 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS L S I V G+ Q Y K LDKLG+ V K+ PF Sbjct: 112 AS---LPLAQSTEISLFPEGGVSFRGLAMQQLYFKGMLDKLGLEADIVHIGDYKSAGEPF 168 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + +A + +++ + + + + S L D +++ +A L+D Sbjct: 169 YLTAPSEEAAKQQRELGEGLFVEVTKSCATSERKDAAAYRALIDEGLFSSQQALDHKLVD 228 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + E + L + ++ PK++ + N+ + + K+ Sbjct: 229 TLEYHNEFIKRLKKTYAKADFKL--NYGMPKSFEPPKINNMMDAISFFQKLSAPKKKSNN 286 Query: 286 GLWAV 290 + A+ Sbjct: 287 DILAL 291 >gi|88706603|ref|ZP_01104306.1| protease IV [Congregibacter litoralis KT71] gi|88699099|gb|EAQ96215.1| protease IV [Congregibacter litoralis KT71] Length = 598 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 10/249 (4%) Query: 29 SHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGS 79 S + P VA + +G + S L + + + A+++ +++ GGS Sbjct: 300 SRAASDLPKVAVVTAQGNMLPGDQPPGTIGSGSLSRLLRKTAERKGVEAIVLRVTTGGGS 359 Query: 80 AYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A E I I++++ PV+ + +AAS GY I+ A++ I A TSL GSIGV + Sbjct: 360 VFASEIIRAEIERIRKTGMPVVVSMGSVAASGGYYIATAADRIFATPTSLTGSIGVFAAF 419 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P V+ L K GV + ++ + P +NP +Q VD Y F+ LVSESR+ Sbjct: 420 PTVERLLAKGGVQTDGLGTTELAGALRPDRALNPALADTLQQSVDHIYRQFLGLVSESRS 479 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 I L+ GR+ + +A + GLID +G ++ + AL + P + Sbjct: 480 IDLVTLDALAQGRVLSARDALEAGLIDGLGSLDDAAKEAAALAGLDDDYAVISILPEFSS 539 Query: 259 WFCDLKNLS 267 L+ LS Sbjct: 540 SELLLQQLS 548 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 96/256 (37%), Gaps = 50/256 (19%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVA--------RIAIRGQIEDS--------------- 50 ++ +V L V++ S+S E A + R QIE + Sbjct: 15 LIFIVLLVVLWMSFSGSPEPLPQRAALVLDPTGRVVDERSQIEAASLLFEQPAASRETLL 74 Query: 51 QELIERIERISRDDSATALIVSLSSPGG--SAYAGE--AIFRAIQKVKNR-KPVITEVHE 105 +LI+ +E DD AL++ L GG S + + AI + + KPVI V + Sbjct: 75 TDLIDSVELARSDDRIAALVLKL---GGLVSIGQSKTTELAEAIARFRETGKPVIA-VGD 130 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y ++ ++ ++ V G F Y LDKL V++ ++ K+ Sbjct: 131 YFTQDQYRLAVEADTLLMHPFGAVALEGFSFYTNYFADALDKLSVTMHVFRAGDYKSIAE 190 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL------------SDGR 211 P ++++P Q+ ++ +D + + V R + L DG Sbjct: 191 PLLRNDMSPGERQITREWLDDLWDAYSSAVESRRGLEPGAVNALLNDFPARLRAVDGDG- 249 Query: 212 IWTGAEAKKVGLIDVV 227 A + GL+D + Sbjct: 250 ---ARLALEAGLVDEL 262 >gi|170717550|ref|YP_001784638.1| periplasmic protease [Haemophilus somnus 2336] gi|168825679|gb|ACA31050.1| Peptidase S49 domain protein [Haemophilus somnus 2336] Length = 352 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 116/264 (43%), Gaps = 17/264 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSA 80 + E PH+ + +G I S+ E+ I DD +++ L SPGG Sbjct: 95 GETLAEKRKPHLFVLHFKGDISASETTALREEISAIIAVAKEDDE---VLLRLESPGGVV 151 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + ++K R + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 152 HGYGLAASQLARLKQRNIKLTVAVDKVAASGGYMMACVADKIISAPFAIIGSIGVVAQIP 211 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K + + + + K + E K Q ++ ++ F + V+++R Sbjct: 212 NIHRLLKKHDIDVDVMTAGEYKRTMTILGENTEKGKAKFQQDLEDTHLLFKQFVTQNR-- 269 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 P+ ++ G W G +A + L+D + +++ D+++ +K K Sbjct: 270 PHLDIDKIATGEHWFGKQALALHLVDEIATSDDLLLQAIK---DKTVLSVKYMM--KKSL 324 Query: 260 FCDLKNLSISSLLEDTIPLMKQTK 283 L + S + L+K+ + Sbjct: 325 IQKLGKQAEESANNVLLRLLKRDE 348 >gi|326408432|gb|ADZ65497.1| Na+/H+ antiporter NhaA [Brucella melitensis M28] gi|326538147|gb|ADZ86362.1| Na+/H+ antiporter NhaA [Brucella melitensis M5-90] Length = 736 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG I+ Sbjct: 466 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGVPVQSRLIY 525 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 526 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 585 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 586 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 645 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 646 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLSG 700 Query: 266 LSISS 270 + + S Sbjct: 701 IGMDS 705 >gi|119385040|ref|YP_916096.1| peptidase S49 [Paracoccus denitrificans PD1222] gi|119374807|gb|ABL70400.1| peptidase S49 [Paracoccus denitrificans PD1222] Length = 267 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 11/214 (5%) Query: 37 HVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 VA + ++G I L +ER + A+ ++L+SPGGS I Sbjct: 11 TVAVLRLQGAIGVAGRGGPGLSDAALAPLLERAFKRRKPAAVALALNSPGGSPVQSSLIG 70 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ + PV V ++AAS GY ++ A++ I A ++S++GSIGV+ + Sbjct: 71 ARIRRLAEERGIPVHAFVEDVAASGGYWLATAADYIWADDSSVLGSIGVISSGFGFVELI 130 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + G+ + + K+ PF P+ ++ + ++ + F V R + Sbjct: 131 QRHGIERRVHTAGRSKSMLDPFRPQTPEDIERLDRLLGPIHEAFKEQVRARRGNRLPEDR 190 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L G IWTG EA ++GL D + + LY Sbjct: 191 DLFTGEIWTGREAVELGLADGIAHLVPKMRELYG 224 >gi|271500646|ref|YP_003333671.1| Peptidase S49 domain-containing protein [Dickeya dadantii Ech586] gi|270344201|gb|ACZ76966.1| Peptidase S49 domain protein [Dickeya dadantii Ech586] Length = 348 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + P + + G ++ + E+ + +D +++ L SPGG + Sbjct: 93 GEEKSARPCLYVLDFNGSMDAGEVSSLREEVSAVLAVARPEDE---VLLRLESPGGVVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q+++ R + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P Sbjct: 150 YGLAASQLQRIRQRGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNF 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + ++ + K + F E + + + ++ ++ F + VSE R P Sbjct: 210 NRLLKNKDIDVELHTAGQYKRTLTLFGENTDEGREKFRQELNETHLLFKQFVSEMR--PS 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D +G +++ Sbjct: 268 LDIESVATGEHWFGTQAKDMGLVDAIGTSDDLL 300 >gi|123442462|ref|YP_001006441.1| putative periplasmic protease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089423|emb|CAL12271.1| peptidase family U7 protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 348 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKSGAVAAVKPCLYVIDFKGSI-DAHEVASLREEISAVLAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|327394039|dbj|BAK11461.1| predicted protease SohB [Pantoea ananatis AJ13355] Length = 348 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 12/213 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSAYA 82 +E P + + G I+ S+ ++ + +++ L SPGG + Sbjct: 93 GSLETARPTLYVLDFNGSIDASE--VKSLREEVSAVLAVAQPG-DEVLLRLESPGGMVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q++++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 150 YGLAASQLQRLRDAGLTLTAAVDKVAASGGYMMACVASQIVAAPFAVIGSIGVVAQIPNF 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + + ++ + K + F E + + Q ++ ++ F + V E R P Sbjct: 210 NRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQQDLNETHLLFKQFVHEMR--PS 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A +GLID + +++ Sbjct: 268 LDIDRVATGEHWYGRQALTLGLIDRISTSDDLI 300 >gi|108804065|ref|YP_644002.1| peptidase S49 [Rubrobacter xylanophilus DSM 9941] gi|108765308|gb|ABG04190.1| peptidase S49 [Rubrobacter xylanophilus DSM 9941] Length = 555 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 106/199 (53%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITE 102 + G+ ++ + + RD A+++ + S GG A A + I+R + +++ KPV+ Sbjct: 307 LGGEQAGAESVAAALRVAERDRRVAAVLLHVESRGGDALASDLIWREVARLRRSKPVVVL 366 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + AAS GY + A++ IVA +L GSIGV+ P K +LG+ ++++ A Sbjct: 367 MGNFAASGGYYVGVAADRIVARRNTLTGSIGVVLVRPVAKELYGRLGLRPEALQRGKNAA 426 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 P ++ P ++ ++ ++ +Y F + V E R IP ++ L+ GR+WTG EA++ G Sbjct: 427 ILDPATDPGPGELEALRRQMEHAYREFRQRVVEGRGIPQERLEGLAGGRVWTGEEARREG 486 Query: 223 LIDVVGGQEEVWQSLYALG 241 L+D GG E + LG Sbjct: 487 LVDATGGFREALRLAGELG 505 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 89/199 (44%), Gaps = 9/199 (4%) Query: 51 QELIERIERISRDDSATALIVSL---SSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEM 106 +EL E ++ + D + +++ + + A E + + + + V++ + E Sbjct: 67 EELREALDAVLYDGRPSGVVLRVRRLDAG---WAALEELRGELARFREAGGRVVSYLRED 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A S Y ++CA++ + AA + +G G+ + + + L++ G+ + + SP K+ Sbjct: 124 ADSRAYYLACAADEVFAAPLAALGITGLRTRVVFAREALERAGLRAEVLAVSPYKSAYDA 183 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + + +A + ++D + V VS +R +P + L D EA + GL+ Sbjct: 184 LARAGFSREAREQALRLLDGRFSELVGAVSRARGMPEEAVRGLIDRAPLAAREALEAGLL 243 Query: 225 DVVGGQEEVWQSLYALGVD 243 D V ++E+ L V Sbjct: 244 DGVCYEDELPGRLGGAKVA 262 >gi|27377645|ref|NP_769174.1| proteinase [Bradyrhizobium japonicum USDA 110] gi|27350790|dbj|BAC47799.1| proteinase [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 19/269 (7%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + + G I L +ER +A A+ + ++SPGGS I+ Sbjct: 32 VPVVRLSGVIGAVTPLRPGMTLAGVARVLERAFSMRNAKAVALVINSPGGSPVQSRQIYL 91 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ K PV+ V ++AAS GY+I+CA + I +S++GSIGV+ + + Sbjct: 92 RIKQLAAEKKLPVLVFVEDVAASGGYMIACAGDEIFCDPSSILGSIGVVGGSFGFQDAIK 151 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTL 205 +LG+ + + KA PF NP V ++ + + F+ LV ESR + Sbjct: 152 RLGIERRLYTAGAHKAMLDPFLPENPDDVAKLKALQREIHQIFIALVRESRGARLKGEDD 211 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-----DQSIRKIKDWNPPKNYWF 260 L G W GA + +GL D +G ++ Y V Q + K+ Sbjct: 212 TLFTGEYWAGASSIALGLADGIGDLRSTLRARYGEKVLTPVIAQPTGLLSGLLGRKSPGA 271 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 L L + L D L+ + + +WA Sbjct: 272 GQLSALESMAGLPDE--LISAVETRAIWA 298 >gi|301156336|emb|CBW15807.1| predicted inner membrane peptidase [Haemophilus parainfluenzae T3T1] Length = 351 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 15/224 (6%) Query: 35 SPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P V + +G I S+ E+ I DD +++ L SPGG + Sbjct: 101 KPCVYVLDFKGDISASETTALREEISAIINVAKADDE---VLLRLESPGGVVHGYGLAAS 157 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P + L K Sbjct: 158 QLARLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPNIHRLLKK 217 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + V+++R P+ + Sbjct: 218 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQAELEETHQLFKQFVAQNR--PHLDVDKV 275 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 + G W G +A ++ L+D + +++ D+S+ +K Sbjct: 276 ATGEHWFGQQALELQLVDELATSDDIILEKMK---DKSVIAVKY 316 >gi|238751909|ref|ZP_04613395.1| protease sohB [Yersinia rohdei ATCC 43380] gi|238709889|gb|EEQ02121.1| protease sohB [Yersinia rohdei ATCC 43380] Length = 348 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGAVATLKPCLYVIDFKGSI-DAHEVTSLREEISAVLAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHVLFKQFVQQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|227111423|ref|ZP_03825079.1| putative periplasmic protease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 348 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 6/204 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQ 91 P + + G ++ + L E I + +++ L SPGG + +Q Sbjct: 99 KPCLYVLDFNGSMDAGEVSSLREEISAVLAVAKPKDEVLLRLESPGGVVHGYGLAASQLQ 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L + Sbjct: 159 RLRQGGVRLTVSVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNFHRLLKNKDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + ++ ++ ++ F V + R P ++ G Sbjct: 219 DVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHTLFKDFVQQMR--PSLDIDSVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK +GLID +G +++ Sbjct: 277 EHWFGTQAKDLGLIDAIGTSDDLL 300 >gi|291617611|ref|YP_003520353.1| SohB [Pantoea ananatis LMG 20103] gi|291152641|gb|ADD77225.1| SohB [Pantoea ananatis LMG 20103] Length = 348 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 12/213 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSAYA 82 +E P + + G I+ S+ ++ + +++ L SPGG + Sbjct: 93 GSLETARPTLYVLDFNGSIDASE--VKSLREEVSAVLAVAQPG-DEVLLRLESPGGMVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q++++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 150 YGLAASQLQRLRDAGLTLTAAVDKVAASGGYMMACVASQIVAAPFAVIGSIGVVAQIPNF 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + + ++ + K + F E + + Q ++ ++ F + V E R P Sbjct: 210 NRLLKRNDIDVELHTAGQYKRTLTLFGENTEEGREKFQQDLNETHLLFKQFVHEMR--PS 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A +GLID + +++ Sbjct: 268 LDIDRVATGEHWYGRQALTLGLIDRISTSDDLI 300 >gi|261821585|ref|YP_003259691.1| periplasmic protease [Pectobacterium wasabiae WPP163] gi|261605598|gb|ACX88084.1| Peptidase S49 domain protein [Pectobacterium wasabiae WPP163] Length = 348 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 6/221 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQ 91 P + + G ++ + L E I + +++ L SPGG + +Q Sbjct: 99 KPCLYVLDFNGSMDAGEVSSLREEISAVLAVAKPKDEVLLRLESPGGVVHGYGLAASQLQ 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L + Sbjct: 159 RLRQGGVRLTVSVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNFHRLLKNKDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + ++ ++ ++ F V + R P ++ G Sbjct: 219 DVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHTLFKDFVQQMR--PSLDIDSVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 W G +AK +GLID +G +++ + A S+R + Sbjct: 277 EHWFGTQAKDLGLIDAIGTSDDLLIAEMANHEVLSVRYTRR 317 >gi|260883200|ref|ZP_05894814.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 9 str. C68] gi|260872728|gb|EEX79797.1| Na+/H+ antiporter NhaA [Brucella abortus bv. 9 str. C68] Length = 723 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 453 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQLRLIY 512 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 513 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 572 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + K PF + ++ ++ + + F+ +V E R Sbjct: 573 KKIGVERHVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 632 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 633 DLFSGLFWTGTTAASLGLIDGLGDMRSFLRKTYGDKV-----KLKLIQPQRGLLGRKLPG 687 Query: 266 LSISS 270 + + S Sbjct: 688 IGMDS 692 >gi|156975136|ref|YP_001446043.1| putative periplasmic protease [Vibrio harveyi ATCC BAA-1116] gi|156526730|gb|ABU71816.1| hypothetical protein VIBHAR_02863 [Vibrio harveyi ATCC BAA-1116] Length = 353 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 8/212 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 S PH+ + G I D++E+ E ++ + +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLRLESGGGMVHGY 155 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 156 GLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFN 215 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E KA + ++ ++ F +SE R P Sbjct: 216 KLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFISERR--PAL 273 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++ G W G +AK++GL+D + +++ Sbjct: 274 ELEKVATGEHWFGTQAKELGLVDEISTSDDLV 305 >gi|299769230|ref|YP_003731256.1| putative periplasmic protease [Acinetobacter sp. DR1] gi|298699318|gb|ADI89883.1| putative periplasmic protease [Acinetobacter sp. DR1] Length = 320 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + + E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENIREEITLILA--TAKAGRDRVVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I+AA ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAAPFAIVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KQHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A ++ L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGEDALELNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + L Sbjct: 284 LQAAQMADSLIPAVMNKVADTL 305 >gi|83941426|ref|ZP_00953888.1| peptidase, family protein S49 [Sulfitobacter sp. EE-36] gi|83847246|gb|EAP85121.1| peptidase, family protein S49 [Sulfitobacter sp. EE-36] Length = 250 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 9/212 (4%) Query: 40 RIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + + G I + + I++ A+++ +SSPGGS I I++ Sbjct: 1 MVRLSGVIGGRTRGGLNDSGIGPAIDKAFNRGKPAAVVLEISSPGGSPVQSSLIGARIRR 60 Query: 93 VKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + K PVI V ++AAS GY ++ A++ I A +S++GSIGV+ F+ + GV Sbjct: 61 LAEEKNIPVIAFVEDVAASGGYWLAAAADEIYADPSSVLGSIGVISASFGADEFIQRHGV 120 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + K+ PF P+ V ++ +++ + F+ V+ R L G Sbjct: 121 ERRVYTAGQSKSMLDPFRPEKPEDVARLKQLLEDIHGNFIDHVTSRRGSKLSSDSDLFTG 180 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 +W A ++GLID +G + + + V Sbjct: 181 EVWLAKRATELGLIDGIGHLRPMIKQRFGDKV 212 >gi|264677100|ref|YP_003277006.1| peptidase S49 [Comamonas testosteroni CNB-2] gi|262207612|gb|ACY31710.1| peptidase S49 [Comamonas testosteroni CNB-2] Length = 302 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 14/270 (5%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLS 74 + V+F ++ SPH A + I+G+I + ++ + D + A+++ ++ Sbjct: 35 MWAVFFKDTATKTSTSPHTAVVEIKGEIASGADASAEFVVAAMRSAFEDSGSRAVVLLIN 94 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGGS I + ++K + KP+ V E ASA Y I+ A++ I + S+VGSI Sbjct: 95 SPGGSPVQAGIINDEMTRLKAKYNKPLYAVVEESCASAAYYIAAAADEIFVDKASIVGSI 154 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GVL +DK+GV + + + K PFS ++ + + +++ + F+ + Sbjct: 155 GVLMDGFGFTGVMDKVGVERRLLTAGENKGFLDPFSPMSAQQKEFALQMLEQIHQQFIGV 214 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V R +T + G WTG +A ++GL D +G + V + + ++ D+ Sbjct: 215 VKAGRGDRLHETPEMFSGLFWTGQQAVELGLADKLGSLDYVAREVV------KAEEVIDY 268 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 ++ L +++ E ++ M+ Sbjct: 269 T-RRDNVAERLAKRFGAAIGEGSVKAMRGL 297 >gi|265999603|ref|ZP_05467088.2| Na(+)/H(+) antiporter nhaA [Brucella melitensis bv. 2 str. 63/9] gi|263094920|gb|EEZ18628.1| Na(+)/H(+) antiporter nhaA [Brucella melitensis bv. 2 str. 63/9] Length = 723 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG I+ Sbjct: 453 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGVPVQSRLIY 512 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 513 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 572 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 573 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAGKLGDNP 632 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L G WTG A +GLID +G + Y V K+K P + L Sbjct: 633 DLFSGLFWTGTTAASLGLIDGLGDMLSFLRKTYGDKV-----KLKLIQPQRGLLGRKLSG 687 Query: 266 LSISS 270 + + S Sbjct: 688 IGMDS 692 >gi|298293861|ref|YP_003695800.1| peptidase S49 [Starkeya novella DSM 506] gi|296930372|gb|ADH91181.1| peptidase S49 [Starkeya novella DSM 506] Length = 298 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGS 79 + ++P V + + G I + + +ER A A+ + ++SPGG+ Sbjct: 20 AKFRGDTPVVPVVRLSGAIGMATPFRPGVTFANTAKALERAFAVKGAKAVALIINSPGGA 79 Query: 80 AYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 +++ I+ + K PVI V ++AAS GY+++CA++ IVA S+VGSIGV+ Sbjct: 80 PAQSHLVYKRIRALAEEKELPVIAFVEDVAASGGYMLACAADEIVADVFSIVGSIGVVSA 139 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 L+KLG+ + + K PF + ++ ++ + + FV LV + R Sbjct: 140 GFGFPRALEKLGIDRRVYTAGERKVMLDPFQPEKEEDIERLKALQQEIHAAFVDLVKQRR 199 Query: 198 N-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + + L G W +A+ +GL+D +G ++ Y V Sbjct: 200 GDVLSAEDSTLFSGEFWAAPQAQGLGLVDSIGDMRSFLRARYGDKV 245 >gi|312115016|ref|YP_004012612.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] gi|311220145|gb|ADP71513.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] Length = 307 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 26/285 (9%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGG 78 + + + + + G I + L ++R A+I+ ++SPGG Sbjct: 28 GNLFSSSRTTIPVVRLSGAIGAASPLRQGLTLSGCATALDRAFAAKG-PAVILQINSPGG 86 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S I+ I +K K V ++AAS GY+I+CA++ I A +S+VGSIGV+ Sbjct: 87 SPVQSRLIYDRIVALKEEHDKKVYAFCEDVAASGGYMIACAADEIYADGSSIVGSIGVIS 146 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + KLG+ + S K + PF P+ + ++ + + F+ LV ES Sbjct: 147 AGFGFVHLIHKLGIDRRVYTSGENKMQLDPFRPEKPEEISRLKRLQAIVHEDFIALVKES 206 Query: 197 RNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R + L G W G +A ++GLID + +S Y V ++K + Sbjct: 207 RGDRIANSGDNLFTGEFWAGRQALELGLIDGIIDLRAKMRSEYGDKV-----RLKLISTE 261 Query: 256 KNYWFCDL--------KNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + ++ + IS L+ + + +WA + Sbjct: 262 RGFFRRKAGVGVSVSGTGMGISFAQGFADDLISALEERAIWARFG 306 >gi|150395686|ref|YP_001326153.1| peptidase S49 [Sinorhizobium medicae WSM419] gi|150027201|gb|ABR59318.1| peptidase S49 [Sinorhizobium medicae WSM419] Length = 288 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 13/272 (4%) Query: 34 NSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + + I + G I + +E+ A A+ +S++SPGGS Sbjct: 16 DGVTIPAIRLHGAIMAGGSPLRPVLNLATVAPLLEKAFSVKDAPAVAISINSPGGSPVQS 75 Query: 84 EAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I++ I+ + K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 76 RLIYQRIRDLAQEKRKRVLIFVEDVAASGGYMIALAGDEIIADPTSIVGSIGVVSGGFGF 135 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K+GV + + K PF + ++ ++ + + F+++V R Sbjct: 136 PDLLKKIGVERRVYTAGENKVLLDPFQPEKERDIEFLKGLQLEIHDIFIQMVKSRRGSLL 195 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPPKNYWF 260 L G WTG +++GL+D +G + Y + I+ + + Sbjct: 196 ADHPDLFSGLFWTGQRGQELGLVDSLGDMRSEVRKRYGEKARLELIQPARSLFGRRQPGA 255 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 ++ + L+ + + LWA + Sbjct: 256 AVAGAIAAPLVASAAAGLVDTLEERALWARFG 287 >gi|213027718|ref|ZP_03342165.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 254 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 33 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 89 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 90 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 149 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 150 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 207 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D + +EV L Sbjct: 208 PALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 247 >gi|50084405|ref|YP_045915.1| putative periplasmic protease [Acinetobacter sp. ADP1] gi|49530381|emb|CAG68093.1| putative protease (SohB) [Acinetobacter sp. ADP1] Length = 320 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 17/264 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSAYAGEA 85 + N+ + + +G I+ S ++++ + +++ L SPGG + Sbjct: 53 KKNNQKIFVLDFKGDIQASA--VDQLREEITLILATAKSGKDRVVLRLESPGGMVHGYGL 110 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++++ + V ++AAS GY+++C +N IV+A +++GSIGV+ Q P Sbjct: 111 AAAQLVRLRDAGFHLTIVVDKVAASGGYMMACIANEIVSAPFAILGSIGVVAQVPNFNRL 170 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 171 LKEHNVDFELYTAGEYKRTVTMFGENTPEGKAKFEEELKQTHALFKHFVEKYR--PQLNV 228 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G W G +A + L+D + +E SL + K + Sbjct: 229 EKVATGEHWYGQDALDLNLVDKLQTSDEYLLSLL------PQHDVYVITTRKKPTLGERL 282 Query: 265 NLSISSLLEDTIPLMKQTKVQGLW 288 L + L + IP + V+ L Sbjct: 283 GLQAAQLADSFIPAVMNKVVESLV 306 >gi|149186505|ref|ZP_01864817.1| periplasmic serine protease [Erythrobacter sp. SD-21] gi|148829732|gb|EDL48171.1| periplasmic serine protease [Erythrobacter sp. SD-21] Length = 626 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 9/213 (4%) Query: 38 VARIAIRGQIEDSQ--------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 + + I G+I D + I + + D L+V + SPGGSA A E I A Sbjct: 314 IGVVTIAGEIVDGEAGPGTAGGTRIATLLDEALDQDFAGLVVRVDSPGGSALASEEIRNA 373 Query: 90 IQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + K + PV + +AAS GY ++ ++ I A ++ GSIG+ P + + Sbjct: 374 ILRHKAKDIPVAVSMANVAASGGYWVATPADRIFAEPETITGSIGIFALIPTFEDAAASI 433 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV+ V++ P+ +P P + P+ +++Q ++ Y F+ V+ +R + ++ + Sbjct: 434 GVNSDGVQTGPLSGQPDPIAGFTPEVDRILQASIEDGYTDFLTRVANARQMTLEQVDRVG 493 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 GR+W G A+++ L+D GG + + + A Sbjct: 494 QGRVWDGGTARQIRLVDEYGGMADALEWVAAQA 526 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 17/218 (7%) Query: 50 SQELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++L+ I + D+ TA+++ L G + E + KPV+ A Sbjct: 81 ARDLVRAINAAASDERITAVVLDLDRFMGAGQVHLAEVGAALDRVRAADKPVLAYATAYA 140 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 ++ ++ + G Y LDKL V+ + K K+ P+ Sbjct: 141 DDG-VFLAAHASEVWVNPQGGAFVAGPGGNRLYYAGLLDKLKVNARVYKVGTYKSAVEPY 199 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG--RIW-------TGA 216 +E ++ A + Q + + + + V ++R L L G W Sbjct: 200 TESSMSEPARENAQALYGALWEEWQANVKKAR---PAADLKLVSGDPAAWVEAAKGDLAT 256 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 A L+D +G + E + + L + ++ P Sbjct: 257 AALNARLVDKLGSRTEFNERVVELVGEDEWSELPGAYP 294 >gi|113460984|ref|YP_719051.1| putative periplasmic protease [Haemophilus somnus 129PT] gi|112823027|gb|ABI25116.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Haemophilus somnus 129PT] Length = 347 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 12/215 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSA 80 + E PH+ + +G I S+ E+ I DD +++ L SPGG Sbjct: 90 GETLAEKRKPHLFVLHFKGDISASETTALREEISAIIAVAKEDDE---VLLRLESPGGVV 146 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + ++K R + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 147 HGYGLAASQLARLKQRNIKLTVAVDKVAASGGYMMACVADKIISAPFAIIGSIGVVAQIP 206 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K + + + + K + E K Q ++ ++ F + V+++R Sbjct: 207 NIHRLLKKHDIDVDVMTAGEYKRTMTILGENTEKGKAKFQQDLEDTHLLFKQFVTQNR-- 264 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 P+ ++ G W G +A + L+D + +++ Sbjct: 265 PHLDIDKIATGEHWFGKQALALHLVDEIATSDDLL 299 >gi|163739566|ref|ZP_02146976.1| peptidase, family S49 [Phaeobacter gallaeciensis BS107] gi|161387319|gb|EDQ11678.1| peptidase, family S49 [Phaeobacter gallaeciensis BS107] Length = 265 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 9/216 (4%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P VA + + G I + L +ER R A+ ++SPGGS Sbjct: 9 NKPPLVAVVRLNGAIGMAGRGALNDAALGPVLERAFRKGKPAAVAFEINSPGGSPVQSAL 68 Query: 86 IFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ + P I V ++AAS GY ++ +++ I A E+S++GSIGV+ Sbjct: 69 IGARIRRLSEELKVPTIAFVEDVAASGGYWLAASADEIWADESSILGSIGVISAGFGAHV 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + GV + + K+ PF N + V+ ++ ++ + F+ V + R D Sbjct: 129 FLARQGVERRVYTAGRSKSMLDPFRPENAEDVKRLKQLLGDIHDNFIAHVKDRRGDKLDT 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + L G IW G A +GLID +G Q+ + Sbjct: 189 SKDLYTGEIWLGRRAVSLGLIDGIGHLRPKMQARFG 224 >gi|170727245|ref|YP_001761271.1| putative periplasmic protease [Shewanella woodyi ATCC 51908] gi|169812592|gb|ACA87176.1| Peptidase S49 domain protein [Shewanella woodyi ATCC 51908] Length = 343 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 114/247 (46%), Gaps = 14/247 (5%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P V + +G I+ ++ E I I I+ A++ ++ S GG + Sbjct: 94 SEPRVFVVDFKGSIDANEVSSLREEISAIIAIAE-PGDEAIV-NVESGGGMVHGYGLASS 151 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ + V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L K Sbjct: 152 QLDRLRQANIHLTICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVVAQVPNFNKLLKK 211 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + K + F E + + Q ++ ++ F +S+ R P + + Sbjct: 212 HDIDYEQHTAGDFKRTLTVFGENTDEGREKFQQELEETHELFKGFISQYR--PELELAKV 269 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK-NYWFCDLKNL 266 + G W G +A ++GLID + ++V +L ++++ ++K K +L Sbjct: 270 ATGEHWYGQQAIELGLIDAIATSDDVVMNLAK---ERTVIRVKYQLKKKFADKLAHAASL 326 Query: 267 SISSLLE 273 S+SS+ Sbjct: 327 SVSSVFN 333 >gi|226356235|ref|YP_002785975.1| peptidase S49 [Deinococcus deserti VCD115] gi|226318225|gb|ACO46221.1| putative peptidase S49, Signal peptide peptidase (SPPase) [Deinococcus deserti VCD115] Length = 533 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 3/213 (1%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + S ++ ++R D A++V ++S GGSA A + ++R I + KPV+ + Sbjct: 287 GPMAGSDTVVAALKRAKEDKKTKAIVVYVNSGGGSALASDLMWREI--ATSEKPVVVVMG 344 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E AAS GY ++ + IVA+ +L GSIGV+ P ++ F + G+ + V Sbjct: 345 EYAASGGYYLATHARHIVASPYTLTGSIGVVSGKPIMREFNARHGLKPERVGR-ERALMH 403 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S + Q ++ + Y F+ V+E R + ++ + GRIW G +A ++GL+ Sbjct: 404 SASQPYTVEERQHVERAIAEVYDRFITRVAEGRKLSKERVNEIGRGRIWAGQDALELGLV 463 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 D +G L + + P + Sbjct: 464 DELGDLHTGVLRATELAGLPYDAPVWNVAPKSS 496 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 84/187 (44%), Gaps = 5/187 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L ++E++ + ++V +S GS A+ + ++ K V+ + ++ +A Sbjct: 51 EALSAKVEKLRHAEWLHGVLVRVSGFTGSPATAHAVRGILSRLAQDKRVVAYLPQLTMTA 110 Query: 111 GYLIS-CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 LI+ + IVA E++ V G + ++ FL K G+ ++++ KA + FS+ Sbjct: 111 --LIAGSGAREIVAPESADVALAGFATEPTFMGAFLKKHGIEFENLRIREYKAALTRFSQ 168 Query: 170 --VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ + +Q + + ++ +R + + D + + A + GLI V Sbjct: 169 EHMDDANREQLQAFLTGLETAWASDLAAARGVSIETAQAWLDADLTSAQGALEAGLITKV 228 Query: 228 GGQEEVW 234 ++E+ Sbjct: 229 AYEDELV 235 >gi|251792473|ref|YP_003007199.1| putative periplasmic protease [Aggregatibacter aphrophilus NJ8700] gi|247533866|gb|ACS97112.1| S49 family peptidase [Aggregatibacter aphrophilus NJ8700] Length = 353 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 17/234 (7%) Query: 27 WSSHVEDNSPHV-ARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 S +ED + +G I ++ E+ I+ DD +++ L SPGG Sbjct: 95 GESVIEDEQKTTLYVLNFKGDIAATETAALREEISAIIQTAKNDDE---VLLCLESPGGM 151 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + + ++K + V ++AAS GY+++C ++ I++A +++GSIGV+ Q Sbjct: 152 VHGYGLAASQLARLKQHGIKLTVAVDKVAASGGYMMACVADKIISAPFAVIGSIGVVAQI 211 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P V L K V + + + K + E K Q Q +D ++ F + VS++R Sbjct: 212 PNVHRLLKKHDVDVDVMTAGEYKRTMTILGENTEKGKQKFQQELDETHQLFKQFVSQNR- 270 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYALGVDQSIRK 248 P+ ++ G W G +A ++ L+D + ++ + +G+ S++K Sbjct: 271 -PHLDVDSVATGEHWFGQQALQLNLVDEIMTSDDVLLQAIKEKRVIGIKYSVKK 323 >gi|52425201|ref|YP_088338.1| putative periplasmic protease [Mannheimia succiniciproducens MBEL55E] gi|52307253|gb|AAU37753.1| SppA protein [Mannheimia succiniciproducens MBEL55E] Length = 353 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 11/226 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR--DDSATALIVSLSSPGGSAYAGEAIF 87 E P V + +G I S+ L E I I + + +++ L SPGG + Sbjct: 100 ESLKPCVYVMDFKGDIRASETAALREEISAILNVANPATDEVLLRLESPGGVVHGYGLAA 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K + + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P + L Sbjct: 160 SQLARLKQKGIKLTVAVDKVAASGGYMMACVADKIVAAPFAVIGSIGVVAQVPNIHRLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K V + + + K + E K Q Q ++ ++ F + V+ +R P Sbjct: 220 KHDVDVDVMTAGEYKRTVTFVGENTEKGKQKFQQELEETHDLFKQFVTANR--PLVDIDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQE----EVWQSLYALGVDQSIRK 248 ++ G W G +A + L+D + + + Q +GV +++K Sbjct: 278 IATGEHWFGQQALALNLVDEIATSDDLILDAMQDKSVIGVKYAVKK 323 >gi|295690720|ref|YP_003594413.1| signal peptide peptidase SppA [Caulobacter segnis ATCC 21756] gi|295432623|gb|ADG11795.1| signal peptide peptidase SppA, 67K type [Caulobacter segnis ATCC 21756] Length = 594 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 105/255 (41%), Gaps = 18/255 (7%) Query: 33 DNSPHVARIAIRGQIED----------------SQELIERIERISRDDSATALIVSLSSP 76 P +A I G I S ++ + + D A++ +SSP Sbjct: 293 KTGPAIAVIGAEGAIVTGTSGGGSPFSGESNVYSDDVAQAFRNATEDKDVKAIVFRVSSP 352 Query: 77 GGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS A E I KPV+ + AAS GY IS ++ IVA ++L GSIGV Sbjct: 353 GGSDTASEQILAAMKAAKAAGKPVVVSMGTYAASGGYWISSQADAIVAQPSTLTGSIGVY 412 Query: 136 FQYPYVKPFLDKLGVSI-KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L + GV + P+ +D Y F+ V+ Sbjct: 413 GGKFAIGDALARFGVDTKQLHVGGDYAQAFGSGDGFTPEQRAKFAGWMDRIYAGFIIRVA 472 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 E R +P D+ ++ GR+WTG +AK++GL+D +GG + AL ++K + Sbjct: 473 EGRKLPADRVREIAKGRVWTGEQAKQLGLVDELGGFYQAVDKAKALAKLNGDVRLKRMDG 532 Query: 255 PKNYWFCDLKNLSIS 269 ++ + K L +S Sbjct: 533 GQSPFEALEKLLGVS 547 Score = 96.0 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 11/248 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 V+ + D +P ++ G + +IE + R +DD A++V L G + Sbjct: 43 AVLQLDLRQGLTDQAPRTPFASLGGGGDSVMSIIETLRRAEKDDKVRAILVRLPEGGVAP 102 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAG----YLISCASNIIVAAETSLVGSIGV 134 A + + A + + KP+ + S Y++ +++ S ++G+ Sbjct: 103 AAADELRLAFKHFREVGGKPIYAHSQGLYPSGMVTSTYMLGASASEFWMQPDSSFQAVGI 162 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP--FSEVNPKAVQMMQDVVDSSYH-WFVR 191 + + K F DK GV + K +P +S+ P + + S Y V Sbjct: 163 SSESMFFKRFFDKYGVKADYEQRYEYKNAVNPYLYSDYTPAHRESTLSWMGSVYRTALVS 222 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIK 250 + + P T L DG ++ EA+ GLID VG ++ +L G + Sbjct: 223 AAVDRKRDPLQLTRTLEDG-PYSAQEAQAKGLIDKVGQVSDIQALALDKAGKGSKLIDFD 281 Query: 251 DWNPPKNY 258 D+ Sbjct: 282 DYASRNKP 289 >gi|315634187|ref|ZP_07889476.1| protease SohB [Aggregatibacter segnis ATCC 33393] gi|315477437|gb|EFU68180.1| protease SohB [Aggregatibacter segnis ATCC 33393] Length = 352 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 14/232 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 + P + + +G I S+ E I I ++++ + +++ L SPGG + Sbjct: 95 GEDTESERKPSLYVLHFKGDISASETAALREEISAIVQVAKPND--EVLLCLESPGGVVH 152 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++K + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P Sbjct: 153 GYGLAASQLMRLKQHNIKLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPN 212 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + L K V + + + K + E K Q Q ++ ++ F + VS++R P Sbjct: 213 IHRLLKKHDVDVDVMTAGEYKRTVTMLGENTEKGKQKFQQELEETHQLFKQFVSQNR--P 270 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYALGVDQSIRK 248 + ++ G W G +A + L+D + ++ + +GV ++K Sbjct: 271 HLDVEQVATGEHWFGQQALNLNLVDEIMTSDDLLLQAMKEKQLIGVKYVVKK 322 >gi|218659745|ref|ZP_03515675.1| signal peptide peptidase SppA, 36K type [Rhizobium etli IE4771] Length = 254 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 94/228 (41%), Positives = 152/228 (66%), Gaps = 15/228 (6%) Query: 9 KTRYVMLSLV-TLTVVYFSWS-SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA 66 R V ++LV L + ++ ++ PH+A + I G I D EL+ER++++ D Sbjct: 29 FWRIVAVALVVALGLAFYGFAFGGAGTERPHIAHVTISGLIVDDDELLERLKKVETSDQV 88 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A ++S+SSPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+++ A + I+A ++ Sbjct: 89 KAAVISISSPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMVATAGDTIIAGDS 148 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 S+ GSIGV+FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY Sbjct: 149 SITGSIGVIFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSY 208 Query: 187 HWFVRLVSESRNIPYDKTLVLSD-------GRIWTGAEAKKVGLIDVV 227 +WFV LV++ R +P ++ L L+ GR + +AK LID + Sbjct: 209 NWFVDLVADRRKLPREEALKLARRHLLLPAGRHF---QAK---LIDTI 250 >gi|269962018|ref|ZP_06176372.1| sohB protein, peptidase U7 family [Vibrio harveyi 1DA3] gi|269833102|gb|EEZ87207.1| sohB protein, peptidase U7 family [Vibrio harveyi 1DA3] Length = 353 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 12/214 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAY 81 S PH+ + G I+ + E+ + D +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVGSLREEITAVLAVAREGDE---VLLRLESGGGMVH 153 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 154 GYGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPN 213 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + + + + K + F E KA + ++ ++ F +SE R P Sbjct: 214 FNKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFISERR--P 271 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++ G W G +AK++GL+D + +++ Sbjct: 272 ALELEKVATGEHWFGTQAKELGLVDEISTSDDLV 305 >gi|261879358|ref|ZP_06005785.1| signal peptide peptidase SppA [Prevotella bergensis DSM 17361] gi|270333923|gb|EFA44709.1| signal peptide peptidase SppA [Prevotella bergensis DSM 17361] Length = 589 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 3/201 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 VY+++ + V ++ P + + + ++++ + + ++ +D A+++ ++S GGSA Sbjct: 300 IAVYYAYGNIVNEDVPQNSFLTPN--LIVAKDVCKDLAELADNDDVKAVVLRVNSGGGSA 357 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 YA E I+R ++ +K +KPV+ + AAS GY IS +N I A T++ GSIG+ Sbjct: 358 YASEQIWRQVELLKAKKPVVVSMGGAAASGGYYISAGANYIYAEPTTITGSIGIFGIARD 417 Query: 141 VKPFLDK-LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + LGV VK++ S + + +Q +D Y F V++ R + Sbjct: 418 RSDLMTRMLGVKYDEVKTNRNSTMGSEVKPMTAEQFGYIQSSIDRGYMLFKNRVAKGRRM 477 Query: 200 PYDKTLVLSDGRIWTGAEAKK 220 DK + G ++ G++A K Sbjct: 478 SMDKVEAYAQGHVYLGSDALK 498 Score = 85.6 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 103/265 (38%), Gaps = 34/265 (12%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----------------QELIER 56 +L ++++ + S + + V I + G +++ +E++ Sbjct: 24 VLGVMSIAGMIASSEATQKIKENSVLVIDLNGVMQEQADESISTQLSGNTNLGLREILLA 83 Query: 57 IERISRDDSATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 I++ +++ + ++ G+ E I A++ + I E + Y Sbjct: 84 IKKAKNNENIKGIYLNA----GALQADMAQLEEIRNALEGFRKTGKWIVAYGETYSQPCY 139 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE--V 170 ++ A+N I + G+ Q ++K K+G+ + K K+ ++E + Sbjct: 140 YLASAANKIYMNPQGAIDWTGIGGQVVFLKDTYAKIGIKMIPFKCGKYKSATEIYTEDHM 199 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA---KKVGLIDVV 227 + + Q + + + + VS+SR I D +D R+ T + K ++D + Sbjct: 200 SEPSRQQTERYIGGWWQTICQAVSKSRGISTDTLNAYAD-RVITLEDPKNMVKYKMVDGL 258 Query: 228 GGQEEV---WQSLYALGVDQSIRKI 249 ++V + L L D +I +I Sbjct: 259 LYNDQVKNTVKKLLKLDEDDAINQI 283 >gi|48477283|ref|YP_022989.1| putative signal peptide peptidase SppA [Picrophilus torridus DSM 9790] gi|48429931|gb|AAT42796.1| putative signal peptide peptidase SppA [Picrophilus torridus DSM 9790] Length = 247 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 3/242 (1%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ++A + G I + + I LI+ ++S GG A A E ++ + V Sbjct: 2 YIATLNFSGVINGGSISRYLPVFDYIKSKKKIAGLILIINSGGGDANATEILYNKLLDVS 61 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 KPV + + AS Y ++CA+ I A TS+VGSIGV+ P V FL+ LG+ ++ Sbjct: 62 KSKPVYALIEGIGASGAYWLACAARKIYAMSTSIVGSIGVISISPDVSDFLENLGIKMRI 121 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K K SPF +N ++ +++++ + F V + RN+ D+ + G +++ Sbjct: 122 NKIGKYKDINSPFRHMNEDENEIFKELLNDVFLRFREEVKKRRNLTDDEINDTATGLVFS 181 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + + LID +G + V ++ + KIK+ P K + +SL+ Sbjct: 182 ARQGLERKLIDGIGTFDTVLNAI-KNDNNIKTAKIKNLTPRKPFVQRITGMAFDASLIRF 240 Query: 275 TI 276 I Sbjct: 241 LI 242 >gi|189346140|ref|YP_001942669.1| signal peptide peptidase SppA, 36K type [Chlorobium limicola DSM 245] gi|189340287|gb|ACD89690.1| signal peptide peptidase SppA, 36K type [Chlorobium limicola DSM 245] Length = 597 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 15/269 (5%) Query: 32 EDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPG 77 S VA I + G I D L ++ D AL++ + SPG Sbjct: 292 ASGSEAVAVITLSGPIVRSVGSSAMSVDEGTDVGMLRRSLDAALSDKEVKALVLRIDSPG 351 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G A A + + + +KP++ + +AAS GY+ + A + A ++ GSIGV Sbjct: 352 GDALASSDMLQMLDSAAVKKPLVVSMSGIAASGGYMAALAGREVYAMPLTVTGSIGVYAL 411 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P + K+G+ V + F + +A + Y F+ V+ SR Sbjct: 412 KPDISELARKVGLGRDVVTRGRFADANTVFKPLEGEAYEKFIGASGDIYLDFIGKVAASR 471 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPK 256 + + ++ GR+WTG +AK+ GL+D GG ++ L G+D S + P + Sbjct: 472 KMSVAEVDSVAGGRVWTGRQAKQKGLVDHAGGLFAAVRAAQRLAGMDGSKQPQILLYPEQ 531 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 WF L + ++ + + + Sbjct: 532 KSWFQMLLEGNPQDIVGSLERMAMRRVLH 560 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 13/202 (6%) Query: 43 IRGQIEDSQELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNRK-P 98 ++G+ Q+L+ + + D +++ + GG S + AI+KV+ Sbjct: 63 MQGESLSFQDLLFLFNQAAGDKRIDTVLLEI---GGLRTSPAKITELREAIEKVRAGGRK 119 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ +H S YL++ A + IV + G+ + Y L ++GV+ ++ + Sbjct: 120 VVAYLHSAEDS-DYLLASACDSIVVERGGYLLLDGLKAESLYYTTPLGRIGVTFQAAQWK 178 Query: 159 PMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWT 214 K+ P++ +P+ ++ + ++D Y ++ VS+ R I D + + + + Sbjct: 179 KYKSGVEPYTRTAASPEYIEQINALLDDVYADYIGYVSKRRGISRDSLESVINNVALV-S 237 Query: 215 GAEAKKVGLIDVVGGQEEVWQS 236 A+A K+GL D V E+ ++ Sbjct: 238 AAKAVKLGLADGVATIWELKRA 259 >gi|229520509|ref|ZP_04409934.1| SohB protein peptidase U7 family [Vibrio cholerae TM 11079-80] gi|229342607|gb|EEO07600.1| SohB protein peptidase U7 family [Vibrio cholerae TM 11079-80] Length = 356 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKALGLVDEIQTSDDLI 308 >gi|288924896|ref|ZP_06418832.1| signal peptide peptidase SppA, 67K type [Prevotella buccae D17] gi|288338086|gb|EFC76436.1| signal peptide peptidase SppA, 67K type [Prevotella buccae D17] Length = 596 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 23/259 (8%) Query: 28 SSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRD------------DSATALIVSL 73 +S + +A G I S+ L + I D D A+++ + Sbjct: 293 ASEEDTKGDAIAVYYCEGSIVRMPSESLFGGEKEIVSDVVCSDLADLADDDDVKAVVLRI 352 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +S GG AYA E ++R ++ + +KPV+ + MAAS Y +S + +VA T+L GSIG Sbjct: 353 NSGGGDAYASEQLWRQVKLLNAKKPVVVSMSGMAASGAYYMSMGARWLVAQPTTLTGSIG 412 Query: 134 VLFQYPYVKPFLD-KLGVSIKSVKSSPMKAEPSPF------SEVNPKAVQMMQDVVDSSY 186 + P + KLG+ K++ M P N +Q+ V+ Y Sbjct: 413 IFACLPDFSELYNQKLGIRFDEEKTNEMATFSYPIGMVPMARHFNATEATAIQNYVNRGY 472 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F + V+E R + + ++ GR+W G +A ++ LID +GG EE L + Sbjct: 473 VLFRQRVAEGRKMKTAQVEDVAQGRVWLGTDALRLKLIDQLGGLEEAMTKAAQLAKLKKY 532 Query: 247 RKIKDWNPPKNYWFCDLKN 265 + P + L N Sbjct: 533 H--AEEYPLVGSFLEQLLN 549 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 95/262 (36%), Gaps = 34/262 (12%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QEL 53 ++L ++L + S + + + V I ++G I + EL Sbjct: 23 LILGFISLVGIMVSGNGTTKIDDNSVLVINLQGDISEKAEEDFIGRLTGNRINQLGLNEL 82 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGE-----AIFRAIQKVKNRKPVITEVHEMAA 108 + I++ +D + + + + + K I + Sbjct: 83 KDAIKKAQDNDKIKGIYLQA-----GVLQSDYATLQELRNTLADFKKSGKWIIAYGDSYT 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y ++ +N + ++ G+ + + K DK+G+ + K K+ ++ Sbjct: 138 QGAYYLTSVANKLYLNPEGMLDWHGIAARIQFNKGLYDKVGLKYQVFKVGKFKSYTERYT 197 Query: 169 E--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVGLI 224 E ++ + ++ ++ + V VS+SRNI K L+D ++ ++ Sbjct: 198 EEQMSEPNHEQVKRYINGLWDIMVADVSKSRNIAPTKLRQLADSTLFLNDNKMLVSNKIV 257 Query: 225 DVVGGQEEVWQSLYA-LGVDQS 245 D + +++ ++ LG+++ Sbjct: 258 DGLLYYDQLKAAMKKQLGIEED 279 >gi|221640571|ref|YP_002526833.1| peptidase S49 [Rhodobacter sphaeroides KD131] gi|221161352|gb|ACM02332.1| Peptidase S49 [Rhodobacter sphaeroides KD131] Length = 250 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 22/262 (8%) Query: 40 RIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 I ++G I Q L IE+ R + + ++SPGGS I I++ Sbjct: 1 MIRLQGVIASGPRGGLSDQGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLIAARIRR 60 Query: 93 VKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + + K V V ++AAS GY ++CA + I E+SLVGSIGV+F F+ + G+ Sbjct: 61 LASEKGVRVHAFVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFMARNGI 120 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + K+ PF P+ V+ ++ + + + F+ V +R D L + Sbjct: 121 ERRVHTAGRSKSLADPFLPEKPEDVERLRALQEPIHRAFIEHVKRNRGARLDLNADLFNA 180 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +WTG EA ++GL D V Q +Y V ++ + + + +L+ + Sbjct: 181 DVWTGQEAVRLGLADGVAHLVPKLQEIYGDKV-----RLVPYGQRRPFLQRLGMSLAGQA 235 Query: 271 LLEDTIPLMKQTKVQGLWAVWN 292 L E + + LWA + Sbjct: 236 LAE--------VENRALWARYG 249 >gi|119713115|gb|ABL97184.1| protease IV a signal peptide peptidase [uncultured marine bacterium EB0_49D07] Length = 608 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 21/278 (7%) Query: 21 TVVYFSWSSHVED----NSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSAT 67 T+ Y +++ +ED + +A I G I + + +I++I +++ Sbjct: 304 TISYNEYANQMEDDFSESENEIAIITAEGAIMEGEISQGVAGSSGVIKQIRSAHENENTK 363 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAET 126 A++ ++SPGGS A E + + K + V+ + + AAS G IS ++ I A T Sbjct: 364 AIVFRVNSPGGSIIASEMMRDELFAAKTKGIKVVVSMGDYAASGGVYISTPADYIFAEPT 423 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++ GSIGV P ++ +D +GV+ V +S P ++ ++ +Y Sbjct: 424 TITGSIGVAIALPTLENAMDYIGVNFDGVVTSKHGG-WDPTQAIDEDLDKIFASWGADAY 482 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV V++SR+ Y+ ++ GR+W AK++GL+D +GG ++ L Sbjct: 483 DRFVNFVADSRSQSYEDIKAIAGGRVWIATSAKEIGLVDEIGGIDDAIAYAVNL------ 536 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 +++D+ + L I LLE+ +K+ KV Sbjct: 537 TELEDYQVEYYGQELSPEELIIRELLENFDVSIKEPKV 574 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 97/286 (33%), Gaps = 39/286 (13%) Query: 4 VLKKIKTRYVMLSL-VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ----------- 51 V+ + T +V++ + + S V + V I G + D + Sbjct: 21 VMLNLGTAFVLIIITFAIIGGLSSSGPDVTEKDGRVLFIDPTGTVVDQEVFNSDFPFNLE 80 Query: 52 ----------ELIERIERISRDDSATALIVSLSSPG-GSAYAGEAIFRAIQKVKNRKPVI 100 +LI I ++D+ A+ + SS G I + ++ ++ + Sbjct: 81 SNSTDQIQTRDLIALIRAAAKDEEIPAVFIDFSSTGFAGPTTAINIAKELKALRESGKRV 140 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKS 157 ++ ++ YLI+ ++ + VGSI V PY K + L ++ + Sbjct: 141 IAFNDRLSTTSYLIASQASEVWVHP---VGSISVRGLGGMRPYQKELYENLKINFHNYSQ 197 Query: 158 SPMKA--EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WT 214 K+ E + ++++ + + + L++E R I D +DG + + Sbjct: 198 GDFKSAVEGNTRTDMSENDRLQREAIYTPIWDEMKSLMAEGRGIASDDIQSFADGYVGFF 257 Query: 215 GAEAKK-------VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 G A +ID E Q + K + Sbjct: 258 GEAAIANIAYAETNNIIDGTKSFPEFRQYMIEEFGLDEEAKTDTYK 303 >gi|293395939|ref|ZP_06640220.1| S49 family peptidase [Serratia odorifera DSM 4582] gi|291421437|gb|EFE94685.1| S49 family peptidase [Serratia odorifera DSM 4582] Length = 348 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S + + P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKSGAAQASKPCLYVLDFKGS-MDAHEVTSLREEISAVLAVATAEDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRKGGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGQFKRTLTLFGENTEQGRDKFREDLNETHELFKQFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GLID VG +++ Sbjct: 267 SLDIDSVATGEHWFGTQAKEKGLIDAVGTSDDLL 300 >gi|315607923|ref|ZP_07882916.1| signal peptide peptidase SppA [Prevotella buccae ATCC 33574] gi|315250392|gb|EFU30388.1| signal peptide peptidase SppA [Prevotella buccae ATCC 33574] Length = 596 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 23/259 (8%) Query: 28 SSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRD------------DSATALIVSL 73 +S + +A G I S+ L + I D D A+++ + Sbjct: 293 ASEEDSQGDAIAVYYCEGSIVRMPSESLFGGEKEIVSDVVCSDLADLADDDDVKAVVLRI 352 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +S GG AYA E ++R ++ + +KPV+ + MAAS Y +S + +VA T+L GSIG Sbjct: 353 NSGGGDAYASEQLWRQVKLLNAKKPVVVSMSGMAASGAYYMSMGARWLVAQPTTLTGSIG 412 Query: 134 VLFQYPYVKPFLD-KLGVSIKSVKSSPMKAEPSPF------SEVNPKAVQMMQDVVDSSY 186 + P + KLG+ K++ M P N +Q+ V+ Y Sbjct: 413 IFACLPDFSELYNQKLGIRFDEEKTNEMATFSYPIGMVPMARHFNATEATAIQNYVNRGY 472 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F + V+E R + + ++ GR+W G +A + L+D +GG EE L + Sbjct: 473 VLFRQRVAEGRKMKTAQVEDVAQGRVWLGTDALHLKLVDQLGGLEEAMTKAAQLAKLKKY 532 Query: 247 RKIKDWNPPKNYWFCDLKN 265 + P + L N Sbjct: 533 H--AEEYPLVGSFLEQLLN 549 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 95/262 (36%), Gaps = 34/262 (12%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-------------------QEL 53 ++L ++L + S + + + V I ++G I + EL Sbjct: 23 LILGFISLIGIMVSGNGTTKIDDNSVLVINLQGDISEKAEEDFIGRLTGNRINQLGLNEL 82 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGE-----AIFRAIQKVKNRKPVITEVHEMAA 108 + I++ +D + + + + + K I + Sbjct: 83 KDAIKKAQDNDKIKGIYLQA-----GVLQSDYATLQELRNTLADFKKSGKWIIAYGDSYT 137 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y ++ +N + ++ G+ + + K DK+G+ + K K+ ++ Sbjct: 138 QGAYYLTSIANKLYLNPEGMLDWHGIAARIQFNKGLYDKVGLKYQVFKVGKFKSYTERYT 197 Query: 169 E--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT--GAEAKKVGLI 224 E ++ + ++ ++ + V VS+SRNI K L+D ++ ++ Sbjct: 198 EEQMSEPNHEQVKRYINGLWDIMVADVSKSRNIAPTKLRQLADSTLFLNDNKMLVSNKIV 257 Query: 225 DVVGGQEEVWQSLYA-LGVDQS 245 D + +++ ++ LG+++ Sbjct: 258 DGLLYYDQLKAAMKKQLGIEED 279 >gi|153213542|ref|ZP_01948832.1| sohB protein, peptidase U7 family [Vibrio cholerae 1587] gi|124115878|gb|EAY34698.1| sohB protein, peptidase U7 family [Vibrio cholerae 1587] Length = 356 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + +G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKRDPHLFVLDFQGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKALGLVDEIQTSDDLI 308 >gi|289642492|ref|ZP_06474636.1| signal peptide peptidase SppA, 36K type [Frankia symbiont of Datisca glomerata] gi|289507666|gb|EFD28621.1| signal peptide peptidase SppA, 36K type [Frankia symbiont of Datisca glomerata] Length = 689 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 15/267 (5%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 R +RG S L RD+ A + + SPGGS A + I R +++ + Sbjct: 374 GRAPLRGPAMTSDALTAAFRAAGRDEDVAAAVFRVDSPGGSYVASDLIRREVERFQATGR 433 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV+ + +AAS GY ++ ++ IVA +L GSIGV V+ LDK+GV +V Sbjct: 434 PVVVSMGSVAASGGYFVALGADAIVAHPGTLTGSIGVFGGKQVVRELLDKIGVRFGAVAE 493 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP E +P + + + +D Y FV V+ R + + ++ GR+WTGA+ Sbjct: 494 GENALMTSPRREFSPAERKKLDEFLDRVYEDFVTKVAAGRKMTPEAVHEVARGRVWTGAD 553 Query: 218 AKKVGLIDVVGGQEEVWQSLYA-----------LGVDQSIRKIKDWNPPKN---YWFCDL 263 A + GL+DV+ G + + + L V + PP++ + Sbjct: 554 AHERGLVDVLVGLSQACELAWEKAGLPTSVTPRLRVLPKLALADRLRPPRSSEDPAAAGV 613 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLWAV 290 + ++ L +PL + V Sbjct: 614 GGVPLAGPLSAGLPLTGTALLGASLEV 640 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 9/192 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRK-PVITEVHEMAA 108 + +++ + R DD A LI + +P G+ A + I A+ + Sbjct: 55 RTVVDGLRRAREDDRAATLIARI-APCGTPLARVQEIRDAVIAFREAGGTAFAYADAFGE 113 Query: 109 SAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 G Y ++CA + I A +G GV + P+++ LD+LG+ I+ + K Sbjct: 114 FGGGTVPYYLACAFDQIWLAPPGELGLTGVALETPFLRDALDRLGIEIQVGQRHEYKNAV 173 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + F + + + +V SS V ++ +R + + L D + +A++ G Sbjct: 174 NTFVERDFTAAHREASERIVVSSLSMIVDGIATARGLSPARVRELIDNAPLSAEQARRGG 233 Query: 223 LIDVVGGQEEVW 234 L+D +G ++EV+ Sbjct: 234 LVDRLGYRDEVY 245 >gi|260899603|ref|ZP_05907998.1| putative protease SohB [Vibrio parahaemolyticus AQ4037] gi|308106905|gb|EFO44445.1| putative protease SohB [Vibrio parahaemolyticus AQ4037] Length = 345 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVGSLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++ G W G +AK++GL+D + +++ Sbjct: 273 LELEKVATGEHWFGTQAKELGLVDEISTSDDLV 305 >gi|121611687|ref|YP_999494.1| peptidase S49 [Verminephrobacter eiseniae EF01-2] gi|121556327|gb|ABM60476.1| peptidase S49 [Verminephrobacter eiseniae EF01-2] Length = 323 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 15/294 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYF----SWSSHVEDNSPHVARIAIRGQI-----EDSQELIE 55 +++ +T + + LV + + F + ++PH A + I+G+I ++ ++ Sbjct: 29 IRRWRTFFRLAWLVLMASIAFVTLRQTVPGISKSAPHTAMVDIKGEIAAGAGASAEFVVA 88 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYL 113 + +D + AL++ ++SPGGS I I+++K + KP+ V E ASA Y Sbjct: 89 AMRSALENDGSQALVLLINSPGGSPVQAGIINDEIRRLKAKHNKPIYAVVEETCASAAYY 148 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 I+ A++ I + S+VGSIGVL ++KLGV + + S K PFS K Sbjct: 149 IAAATDDIYVDKASIVGSIGVLMDGFGFTGTMEKLGVERRLLTSGENKGFLDPFSPQTDK 208 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 Q ++D + F+ V R T G WTG +A ++GL D +G + Sbjct: 209 QRAYAQTMLDQIHQQFIAAVKAGRAERLKSTSSDTFSGLFWTGQQAVEMGLADKLGNLDY 268 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG 286 V + + + ++ F L ++L + +MK V G Sbjct: 269 VAREVVKAEDIIDYTRRENVAELLAKRFELLAKRFGTAL---GVGIMKSLSVAG 319 >gi|209548133|ref|YP_002280050.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533889|gb|ACI53824.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 286 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 21/276 (7%) Query: 33 DNSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 N + + ++G I + +E+ A A+ ++++SPGGS Sbjct: 15 KNGITIPVVRLQGPIVSGGGPFRPALNLANVAPVLEKAFAMKDAPAVAITINSPGGSPVQ 74 Query: 83 GEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 IF I+++ +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 75 SRLIFTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIADSTSIVGSIGVVSGGFG 134 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K+GV + + K PF K ++ ++ + + F+ +V E R Sbjct: 135 FPELLKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHQVFISMVRERRAGK 194 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + G W+G ++GL+D +G + + Y K++ + + Sbjct: 195 LRDDAAVFSGLFWSGTRGLELGLVDGLGDMRQELKRRYG-----QKTKLELVAAGRGLFG 249 Query: 261 CDLKNLSI----SSLLEDTIPLMKQTKVQGLWAVWN 292 + +S S+ L++ + + LW+ + Sbjct: 250 RRVPGVSPVSLESAASGLATGLVEAAEERALWSRFG 285 >gi|253572823|ref|ZP_04850222.1| protease IV [Bacteroides sp. 1_1_6] gi|251837555|gb|EES65647.1| protease IV [Bacteroides sp. 1_1_6] Length = 491 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 12/187 (6%) Query: 32 EDNSPHVARIAIRGQIED------------SQELIERIERISRDDSATALIVSLSSPGGS 79 + + VA G+I D ++I + ++ D+ A+++ ++SPGGS Sbjct: 303 DKSGNIVAVYYASGEITDYSGSSTSEEGIVGTKVIRDLRKLKDDEDVKAVVLRVNSPGGS 362 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A+A E I+ A++++K KPVI + + AAS GY ISC ++ IVA T+L GSIG+ P Sbjct: 363 AFASEQIWHAVKELKTEKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMVP 422 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 VK +K+G++ VK++ + N +MQ ++ Y FV +E R++ Sbjct: 423 NVKELSEKIGLTYDVVKTNKFSDFGNIMRPFNQDEKTLMQMMITQGYDTFVNRCAEGRHM 482 Query: 200 PYDKTLV 206 + Sbjct: 483 SKEAIEE 489 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 101/255 (39%), Gaps = 30/255 (11%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-----------------EDS---- 50 ++ +VTL + + + V + + G + +DS Sbjct: 22 LFIIGMVTLFGIVSTADTETIVKKNSVMMLDLNGVLVERTQESPLGILSQLFSDDSNTYG 81 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNRKPVITEVHEMAA 108 +++ I++ +++ + + S G++YA + I A+ K I + Sbjct: 82 LDDILSSIKKAKENENIKGIYLQA-SMLGTSYASLQEIRNALLDFKESGKFIIAYGDSYT 140 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 Y +S ++ ++ ++ G+ + K L K+GV ++ K K+ PF Sbjct: 141 QGLYYLSSVADKVLLNPKGMIEWKGIASAPLFYKDLLQKIGVEMQIFKVGTYKSAVEPFI 200 Query: 168 -SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---IWTGAEAKKVGL 223 +E++P + + ++S + VS SR++P D L+D R + E+ + GL Sbjct: 201 STEMSPANREQVTAFINSIWGQVTEGVSASRSLPVDSLNALAD-RMLMFYPAEESVQCGL 259 Query: 224 IDVVGGQEEVWQSLY 238 D + + +V L Sbjct: 260 ADTLIYRNDVRNYLK 274 >gi|121587057|ref|ZP_01676834.1| sohB protein, peptidase U7 family [Vibrio cholerae 2740-80] gi|121726239|ref|ZP_01679529.1| sohB protein, peptidase U7 family [Vibrio cholerae V52] gi|153828141|ref|ZP_01980808.1| sohB protein, peptidase U7 family [Vibrio cholerae 623-39] gi|227081233|ref|YP_002809784.1| sohB protein, peptidase U7 family [Vibrio cholerae M66-2] gi|229505345|ref|ZP_04394855.1| SohB protein peptidase U7 family [Vibrio cholerae BX 330286] gi|229510985|ref|ZP_04400464.1| SohB protein peptidase U7 family [Vibrio cholerae B33] gi|229518106|ref|ZP_04407550.1| SohB protein peptidase U7 family [Vibrio cholerae RC9] gi|229608364|ref|YP_002879012.1| periplasmic protease [Vibrio cholerae MJ-1236] gi|254291486|ref|ZP_04962277.1| sohB protein, peptidase U7 family [Vibrio cholerae AM-19226] gi|254848189|ref|ZP_05237539.1| peptidase U7 family protein sohB [Vibrio cholerae MO10] gi|297578664|ref|ZP_06940592.1| sohB protein [Vibrio cholerae RC385] gi|298498832|ref|ZP_07008639.1| peptidase U7 family sohB protein [Vibrio cholerae MAK 757] gi|9655526|gb|AAF94219.1| sohB protein, peptidase U7 family [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548692|gb|EAX58741.1| sohB protein, peptidase U7 family [Vibrio cholerae 2740-80] gi|121631185|gb|EAX63558.1| sohB protein, peptidase U7 family [Vibrio cholerae V52] gi|146316416|gb|ABQ20955.1| sohB protein, peptidase U7 family [Vibrio cholerae O395] gi|148876383|gb|EDL74518.1| sohB protein, peptidase U7 family [Vibrio cholerae 623-39] gi|150422550|gb|EDN14506.1| sohB protein, peptidase U7 family [Vibrio cholerae AM-19226] gi|227009121|gb|ACP05333.1| sohB protein, peptidase U7 family [Vibrio cholerae M66-2] gi|227012876|gb|ACP09086.1| sohB protein, peptidase U7 family [Vibrio cholerae O395] gi|229344821|gb|EEO09795.1| SohB protein peptidase U7 family [Vibrio cholerae RC9] gi|229350950|gb|EEO15891.1| SohB protein peptidase U7 family [Vibrio cholerae B33] gi|229357568|gb|EEO22485.1| SohB protein peptidase U7 family [Vibrio cholerae BX 330286] gi|229371019|gb|ACQ61442.1| SohB protein peptidase U7 family [Vibrio cholerae MJ-1236] gi|254843894|gb|EET22308.1| peptidase U7 family protein sohB [Vibrio cholerae MO10] gi|297536258|gb|EFH75091.1| sohB protein [Vibrio cholerae RC385] gi|297543165|gb|EFH79215.1| peptidase U7 family sohB protein [Vibrio cholerae MAK 757] Length = 356 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKALGLVDEIQTSDDLI 308 >gi|209886071|ref|YP_002289928.1| peptidase S49 [Oligotropha carboxidovorans OM5] gi|209874267|gb|ACI94063.1| peptidase S49 [Oligotropha carboxidovorans OM5] Length = 297 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 20/275 (7%) Query: 35 SPHVARIAIRGQIEDSQELI---------ERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +P V + + G I L + +++ A A+ + ++SPGGS Sbjct: 25 APVVPVVRLSGTIGAVTPLRPGLTLAGVSKTLDKAFETKRAQAVALVINSPGGSPVQSRQ 84 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I+ I+++ K PV+ V ++AAS GY+I+CA++ I +S++GS+GV+ + Sbjct: 85 IYTRIRQLAAAKGIPVLAFVEDVAASGGYMIACAADEIFCDPSSILGSVGVIGGTFGFQD 144 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 F+ + G+ + S K+ PF NP V ++ + + F+ LV SR Sbjct: 145 FIKRFGIERRIYTSGEHKSSLDPFLPENPDDVARLKAIQRDIHDDFIALVKRSRGARLKG 204 Query: 204 TLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-----DQSIRKIKDWNPPKN 257 L G W G + ++GL D +G V ++ + V + + + K Sbjct: 205 EEAYLFSGEYWAGNRSIELGLADAIGDLRGVLRARFGETVRMPVIAPKSGLLANLSGRKP 264 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + + L +D I ++ + LWA + Sbjct: 265 GAGAMIAAGLGAGLGDDLISAIEA---RALWARYG 296 >gi|163741908|ref|ZP_02149297.1| peptidase, family S49 [Phaeobacter gallaeciensis 2.10] gi|161384629|gb|EDQ09009.1| peptidase, family S49 [Phaeobacter gallaeciensis 2.10] Length = 265 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 9/216 (4%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P VA + + G I + L +ER R A+ ++SPGGS Sbjct: 9 NKPPLVAVVRLNGAIGMAGRGALNDAALGPVLERAFRKGKPAAVAFEINSPGGSPVQSAL 68 Query: 86 IFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I ++++ + P I V ++AAS GY ++ +++ I A E+S++GSIGV+ Sbjct: 69 IGARVRRLSEELKVPTIAFVEDVAASGGYWLAASADEIWADESSILGSIGVISAGFGAHV 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + GV + + K+ PF N + V+ ++ ++ + F+ V + R D Sbjct: 129 FLARQGVERRVYTAGRSKSMLDPFRPENAEDVKRLKQLLGDIHDNFIAHVKDRRGDKLDT 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + L G IW G A +GLID +G Q+ + Sbjct: 189 SEDLYTGEIWLGRRAVSLGLIDGIGHLRPKMQARFG 224 >gi|229525671|ref|ZP_04415076.1| SohB protein peptidase U7 family [Vibrio cholerae bv. albensis VL426] gi|229339252|gb|EEO04269.1| SohB protein peptidase U7 family [Vibrio cholerae bv. albensis VL426] Length = 356 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKTLGLVDEIQTSDDLI 308 >gi|238785808|ref|ZP_04629779.1| protease sohB [Yersinia bercovieri ATCC 43970] gi|238713300|gb|EEQ05341.1| protease sohB [Yersinia bercovieri ATCC 43970] Length = 284 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 26 AKAGAVAAIKPCLYVIDFKGSI-DAHEVTSLREEISAVLAVATAQDEVLLRLESPGGVVH 84 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 85 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 144 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 145 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 202 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 203 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 236 >gi|254456509|ref|ZP_05069938.1| Clp protease [Candidatus Pelagibacter sp. HTCC7211] gi|207083511|gb|EDZ60937.1| Clp protease [Candidatus Pelagibacter sp. HTCC7211] Length = 268 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 13/232 (5%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSAT---------ALIVSLSSPGGSAYAGEAIFR 88 VA + + G I ++ + + I+ +++ + ++++SPGGS I+ Sbjct: 11 VAHLKLNGVIGNAGKFKQGIDFAGQEEVIKKAFSLKKAHTVAITINSPGGSPVQSHLIYS 70 Query: 89 AIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ KN+K VI ++AAS GYLISCA + I A +S++GSIGV++ + Sbjct: 71 FIRQEAKKNKKKVIVFAEDVAASGGYLISCAGDEIYANSSSIIGSIGVIYSSFGFTELIK 130 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-L 205 K+GV + + K+ PF E + ++ ++ + + F+ +V +SR + DK+ + Sbjct: 131 KIGVERRVHTAGKNKSTLDPFLEEKNEDIERLKKIQIDLHKDFIDVVEKSRGLKLDKSGV 190 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQSIRKIKDWNPPK 256 L G W+G++AK +GLID +G EV + + V + K K W K Sbjct: 191 ELFSGEFWSGSKAKDLGLIDGIGNAHEVLKEKFGDDVIIKKFEKTKGWLSQK 242 >gi|90581225|ref|ZP_01237023.1| putative sohB protein, peptidase U7 family [Vibrio angustum S14] gi|90437596|gb|EAS62789.1| putative sohB protein, peptidase U7 family [Vibrio angustum S14] Length = 353 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 11/234 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 S P + I G I D++E+ E I+ + +++ L + GG + Sbjct: 97 GSLETSRDPRLFVIDFHGSI-DAREVSSLREEITAILAVAIEGDEVLLRLETGGGMVHGY 155 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K + V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 156 GLASSQLDRLKAAGIKLTIAVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQLPNFN 215 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E KA + Q ++ ++ F ++ R P Sbjct: 216 KVLKKNDIDYEQITAGEFKRTLTMFGENTDKAREKFQMEIEETHGLFKNFIAAHR--PDL 273 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G W G +A ++GL+D + +++ D+ + KIK K Sbjct: 274 DLEKVATGEHWFGQQAFELGLVDQISTSDDLITEACK---DREVLKIKYVRRKK 324 >gi|153824949|ref|ZP_01977616.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-2] gi|229529849|ref|ZP_04419239.1| SohB protein peptidase U7 family [Vibrio cholerae 12129(1)] gi|149741461|gb|EDM55491.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-2] gi|229333623|gb|EEN99109.1| SohB protein peptidase U7 family [Vibrio cholerae 12129(1)] Length = 356 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKTLGLVDEIQTSDDLI 308 >gi|28898806|ref|NP_798411.1| putative periplasmic protease [Vibrio parahaemolyticus RIMD 2210633] gi|28807025|dbj|BAC60295.1| sohB protein, peptidase U7 family [Vibrio parahaemolyticus RIMD 2210633] Length = 353 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVGSLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + ++ G W G +AK++GL+D + +++ Sbjct: 273 LELEKVATGEHWFGTQAKELGLVDEISTSDDLV 305 >gi|254501444|ref|ZP_05113595.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] gi|222437515|gb|EEE44194.1| peptidase, S49 (protease IV) family [Labrenzia alexandrii DFL-11] Length = 285 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 11/239 (4%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERI---------ERISRDDSATAL 69 L+ + +++++P + + ++G I S L + ER A A+ Sbjct: 1 MLSSLRRFLPGFLKNDAPIIPVVRLQGPIGMSSPLRPGLSLATAALPLERAFSMKKAPAV 60 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETS 127 + ++SPGGS IF+ I+ + K V+ V ++AAS GY+I+ A + I+ +S Sbjct: 61 ALIVNSPGGSPVQSRLIFQRIRDLAKENEKDVLVFVEDVAASGGYMIALAGDEIIVDPSS 120 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 +VGSIGV+ + K+GV + + K PF P+ ++ ++ + + Sbjct: 121 VVGSIGVVAAGFGFTELIGKIGVERRVYTAGEKKVTLDPFQPEVPEDIEYLKTLQQEIHD 180 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 F+ +V R L G+ WTG A +GL+D +G V + Y + + Sbjct: 181 TFIDMVKSRRADVLSDEPDLFTGKFWTGTSAVNLGLVDSLGDLRGVLKKRYGDKAEAKL 239 >gi|293390340|ref|ZP_06634674.1| S49 family peptidase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950874|gb|EFE00993.1| S49 family peptidase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 352 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 14/232 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 + E+ P + + +G I S+ E I I ++++ ++V L SPGG + Sbjct: 95 GENPAEERKPTLYVLHFKGDISASETAALREEISAIIQVAK--PTDEVLVCLESPGGVVH 152 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++K R + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P Sbjct: 153 GYGLAASQLMRLKQRNIRLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPN 212 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V L K V + + + K + F E K Q Q ++ ++ F R V+++R P Sbjct: 213 VHRLLKKHDVDVDVMTAGEYKRTMTIFGENTEKGKQKFQQELEETHQLFKRFVAQNR--P 270 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYALGVDQSIRK 248 + ++ G W G +A + L+D + ++ + +GV +++K Sbjct: 271 HLDLDKVATGEHWFGQQALNLNLVDEIMTSDDLLLQAMKEKSVIGVKYAVKK 322 >gi|145598216|ref|YP_001162292.1| putative periplasmic protease [Yersinia pestis Pestoides F] gi|108775493|gb|ABG18012.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Yersinia pestis Nepal516] gi|108779482|gb|ABG13540.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Yersinia pestis Antiqua] gi|145209912|gb|ABP39319.1| peptidase family U7 protein [Yersinia pestis Pestoides F] Length = 343 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I +QE+ E IS + +++ L SPGG + Sbjct: 85 AKSGAVAAVKPCLYVIDFKGSI-GAQEVSSLREEISAILAVATAQDEVLLRLESPGGVVH 143 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +++ R + V ++AAS GY+++C ++ I+ A +++GSIGV+ Q P Sbjct: 144 GYGLAASQLARLRQRGIRLTVAVDKVAASGGYMMACVADRIICAPFAIIGSIGVVAQIPN 203 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 204 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 261 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 262 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 295 >gi|261867946|ref|YP_003255868.1| putative periplasmic protease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413278|gb|ACX82649.1| S49 family peptidase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 352 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 111/232 (47%), Gaps = 14/232 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 + E+ P + + +G I S+ E I I ++++ ++V L SPGG + Sbjct: 95 GENPAEERKPTLYVLHFKGDISASETAALREEISAIIQVAK--PTDEVLVCLESPGGVVH 152 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++K R + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P Sbjct: 153 GYGLAASQLMRLKQRNIRLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSIGVVAQIPN 212 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V L K V + + + K + F E K Q Q ++ ++ F + V+++R P Sbjct: 213 VHRLLKKHDVDVDVMTAGEYKRTMTIFGENTEKGKQKFQQELEETHQLFKQFVAQNR--P 270 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYALGVDQSIRK 248 + ++ G W G +A + L+D + ++ + +GV +++K Sbjct: 271 HLDLDKVATGEHWFGQQALNLNLVDEIMTSDDLLLQAMKEKSVIGVKYAVKK 322 >gi|119503764|ref|ZP_01625846.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2080] gi|119460272|gb|EAW41365.1| signal peptide peptidase SppA, 67K type [marine gamma proteobacterium HTCC2080] Length = 609 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 14/262 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 D+ +A I G I + + ++++I + D+ A++ ++SPGGS A Sbjct: 321 DSGHQIAVITAEGVIREGEISPGVAGANGVVKQIRKAHEDEDTKAIVFRVNSPGGSIIAS 380 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E + + K + VI + + AAS G IS ++ I A T++ GSIGV P ++ Sbjct: 381 EMMRDELLAAKRKGIKVIVSMGDYAASGGVYISTPADYIFAEPTTITGSIGVAIALPTLE 440 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +D +GV+ V +S P ++ ++ ++Y F+ V+ESR+ YD Sbjct: 441 NAMDYIGVNFDGVVTSKHGG-WDPTQAIDDDLDKIFASWGSAAYDRFINFVAESRSQTYD 499 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK---IKDWNPPKNYW 259 ++ GR+W AK +GL+D +GG ++ +L + + ++ +P + Sbjct: 500 DIKAVAGGRVWIATSAKDIGLVDEIGGIDDALTYAASLAELEDYQVEYYGQELSPEEMIL 559 Query: 260 FCDLKNLSISSLLEDTIPLMKQ 281 L+ L +S + + Sbjct: 560 KELLEQLDVSIGEPKVLSALDG 581 Score = 85.2 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 39/281 (13%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ----------------- 51 T V+ ++ + + VED S I +G + D + Sbjct: 27 TTLIVVFLVIAIIEALTASGPDVEDPSGKALLIDPKGMVVDQEVFNSESLLTTVTDSSST 86 Query: 52 -----ELIERIERISRDDSATALIVSLSSPG-GSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +L++ I + DDS A++V SS G I + ++ +++ + ++ Sbjct: 87 QIQTRDLVKLIRAAAEDDSIPAVVVDFSSTGFAGPTTAINIAKELKALRDSGKRVIAFND 146 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVL---FQYPYVKPFLDKLGVSIKSVKSSPMKA 162 ++ YL++ ++ + VGSI V Y K + L ++I + K+ Sbjct: 147 RLSTTSYLMASQASEVWVHP---VGSISVRGLGGMRNYNKDLFENLKITIHNYSQGDFKS 203 Query: 163 --EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGAEAK 219 E S S ++ + ++ + L++E R I D +D + + G A Sbjct: 204 ATETSWRSNMSENDRMQREALLFPIWEEMKSLMAEGRGIASDDIQSFADNYVGFFGEAAI 263 Query: 220 -------KVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +ID E Q + + + + Sbjct: 264 GNIAYAQANNIIDGTKSFPEFRQYMIEEFGLDEEAETQTYK 304 >gi|22125947|ref|NP_669370.1| putative periplasmic protease [Yersinia pestis KIM 10] gi|45441813|ref|NP_993352.1| putative periplasmic protease [Yersinia pestis biovar Microtus str. 91001] gi|51596464|ref|YP_070655.1| periplasmic protease [Yersinia pseudotuberculosis IP 32953] gi|149365865|ref|ZP_01887900.1| peptidase family U7 protein [Yersinia pestis CA88-4125] gi|153948350|ref|YP_001400900.1| periplasmic protease [Yersinia pseudotuberculosis IP 31758] gi|162418164|ref|YP_001606741.1| putative periplasmic protease [Yersinia pestis Angola] gi|165927409|ref|ZP_02223241.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. F1991016] gi|165938261|ref|ZP_02226820.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. IP275] gi|166010779|ref|ZP_02231677.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. E1979001] gi|166210633|ref|ZP_02236668.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. B42003004] gi|167400849|ref|ZP_02306355.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420332|ref|ZP_02312085.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424898|ref|ZP_02316651.1| peptidase, S49 family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024271|ref|YP_001720776.1| putative periplasmic protease [Yersinia pseudotuberculosis YPIII] gi|186895513|ref|YP_001872625.1| putative periplasmic protease [Yersinia pseudotuberculosis PB1/+] gi|218929312|ref|YP_002347187.1| putative periplasmic protease [Yersinia pestis CO92] gi|229358044|ref|YP_651485.2| putative periplasmic protease [Yersinia pestis Antiqua] gi|229559850|ref|YP_647612.2| putative periplasmic protease [Yersinia pestis Nepal516] gi|229894900|ref|ZP_04510078.1| predicted inner membrane peptidase [Yersinia pestis Pestoides A] gi|229897643|ref|ZP_04512799.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898288|ref|ZP_04513435.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. India 195] gi|229902147|ref|ZP_04517268.1| predicted inner membrane peptidase [Yersinia pestis Nepal516] gi|270490621|ref|ZP_06207695.1| putative signal peptide peptidase SppA, 36K type [Yersinia pestis KIM D27] gi|294503746|ref|YP_003567808.1| peptidase family U7 protein [Yersinia pestis Z176003] gi|21958888|gb|AAM85621.1|AE013808_4 putative protease [Yersinia pestis KIM 10] gi|45436675|gb|AAS62229.1| peptidase family U7 protein [Yersinia pestis biovar Microtus str. 91001] gi|51589746|emb|CAH21376.1| peptidase family U7 protein [Yersinia pseudotuberculosis IP 32953] gi|115347923|emb|CAL20845.1| peptidase family U7 protein [Yersinia pestis CO92] gi|149292278|gb|EDM42352.1| peptidase family U7 protein [Yersinia pestis CA88-4125] gi|152959845|gb|ABS47306.1| peptidase, S49 family [Yersinia pseudotuberculosis IP 31758] gi|162350979|gb|ABX84927.1| peptidase, S49 family [Yersinia pestis Angola] gi|165913922|gb|EDR32540.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. IP275] gi|165920675|gb|EDR37923.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. F1991016] gi|165990481|gb|EDR42782.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. E1979001] gi|166207813|gb|EDR52293.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. B42003004] gi|166962027|gb|EDR58048.1| peptidase, S49 family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049702|gb|EDR61110.1| peptidase, S49 family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056085|gb|EDR65863.1| peptidase, S49 family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750805|gb|ACA68323.1| Peptidase S49 domain protein [Yersinia pseudotuberculosis YPIII] gi|186698539|gb|ACC89168.1| Peptidase S49 domain protein [Yersinia pseudotuberculosis PB1/+] gi|229681043|gb|EEO77138.1| predicted inner membrane peptidase [Yersinia pestis Nepal516] gi|229688578|gb|EEO80647.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. India 195] gi|229693980|gb|EEO84029.1| predicted inner membrane peptidase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701995|gb|EEO90016.1| predicted inner membrane peptidase [Yersinia pestis Pestoides A] gi|262362134|gb|ACY58855.1| peptidase family U7 protein [Yersinia pestis D106004] gi|270339125|gb|EFA49902.1| putative signal peptide peptidase SppA, 36K type [Yersinia pestis KIM D27] gi|294354205|gb|ADE64546.1| peptidase family U7 protein [Yersinia pestis Z176003] gi|320014881|gb|ADV98452.1| putative inner membrane peptidase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 348 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I +QE+ E IS + +++ L SPGG + Sbjct: 90 AKSGAVAAVKPCLYVIDFKGSI-GAQEVSSLREEISAILAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +++ R + V ++AAS GY+++C ++ I+ A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLARLRQRGIRLTVAVDKVAASGGYMMACVADRIICAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|260598142|ref|YP_003210713.1| putative inner membrane peptidase [Cronobacter turicensis z3032] gi|260217319|emb|CBA31301.1| Probable protease sohB [Cronobacter turicensis z3032] Length = 349 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 104/230 (45%), Gaps = 10/230 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYA 82 P + + +G I+ + + + ++ A +++ L SPGG + Sbjct: 93 GEAAPAGKPTLYVLDFKGSIDAHE--VTALREEVTAVLAVAKPADEVLLRLESPGGVVHG 150 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q+++ R+ P+ V ++AAS GY+++C +N IVAA +++GSIGV+ Q P Sbjct: 151 YGLAASQLQRLRERQIPLTIAVDKVAASGGYMMACVANKIVAAPFAIIGSIGVVAQIPNF 210 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + + I+ + K + E + + ++ ++ ++ F V R P Sbjct: 211 NRLLKRNDIDIELHTAGQYKRTLTLLGENTEEGREKFREDLNETHQLFKEFVHSMR--PS 268 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++ G W G +A++ GL+D + +++ + S+R ++ Sbjct: 269 LDIEAVATGEHWYGVQAQEKGLVDDISTSDDLIIARMQERDVVSLRYLQR 318 >gi|260776312|ref|ZP_05885207.1| SohB protein peptidase U7 family [Vibrio coralliilyticus ATCC BAA-450] gi|260607535|gb|EEX33800.1| SohB protein peptidase U7 family [Vibrio coralliilyticus ATCC BAA-450] Length = 349 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 15/258 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 97 SKREPHLFVLDFKGSIDAKEVASLREEVTAILAVAREGD--EVLLRLESGGGMVHGYGLA 154 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 155 SSQLDRIKAAKLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVL 214 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E KA + ++ ++ F + E R P + Sbjct: 215 KKYDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHGLFKDFIRERR--PELELD 272 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A +GL+D + +++ +I ++ K L Sbjct: 273 KVATGEHWFGTQAHSLGLVDEIKTSDDLVVEACKDKTVLAIHYVE-----KKKLTSKLAG 327 Query: 266 LSISSLLEDTIPLMKQTK 283 L+ + + L+ + + Sbjct: 328 LAGEAADNVLMKLIDRGQ 345 >gi|294085840|ref|YP_003552600.1| peptidase S49 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665415|gb|ADE40516.1| peptidase S49 [Candidatus Puniceispirillum marinum IMCC1322] Length = 280 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 15/256 (5%) Query: 33 DNSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 P V + + G I S + + ++++ A A+ + ++SPGGS Sbjct: 12 KKKPVVPVVRLGGVIAASGSGMRRGISLETVEPQLKKAFSIKRAKAVALIINSPGGSPVQ 71 Query: 83 GEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 I R I+ + + PV+ ++AAS GY ++ +++ I A S++GSIGV+ Sbjct: 72 SSLIGRRIRDLAKRADVPVLAFCEDVAASGGYWLAASADEIYADPASIIGSIGVVSAGFG 131 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + K+GV + + K PF + V+ ++ + + F+ + R Sbjct: 132 FDKAIKKIGVDRRVHTAGESKMILDPFQPEQSEEVERLKALQAEIHTQFIAHIENRRGAK 191 Query: 201 YD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L G WTG A K+GL+D VG + S + G D + I+ + Sbjct: 192 LKGDRAELFSGAFWTGETAVKLGLVDAVGEIRQTINSRF--GDDTELMMIEPKRKLLPFG 249 Query: 260 FCDLKNLSISSLLEDT 275 +L S ++ + Sbjct: 250 LTNLSGQMASGIVNEA 265 >gi|269124167|ref|YP_003306744.1| peptidase S49 [Streptobacillus moniliformis DSM 12112] gi|268315493|gb|ACZ01867.1| peptidase S49 [Streptobacillus moniliformis DSM 12112] Length = 552 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 123/262 (46%), Gaps = 13/262 (4%) Query: 38 VARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + I G I + +++E+IE + + +I+ ++SPGGSA E I++ Sbjct: 285 IGVICAEGAIMPNNKSESIITYDDMLEKIESLQEIKNLKGVILRINSPGGSALESERIYK 344 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++ + P+ + +AAS GY IS + + +++ GSIGV+ YP +K+ Sbjct: 345 ELKNL--DVPIFISMSSVAASGGYYISTVAKKVFLNPSTITGSIGVVSMYPTFDEISNKV 402 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G++I++V S + + + + + Y F + V +R + + ++ Sbjct: 403 GLNIETVNSGVATEIFDLKQPLTDELREKLIQSMRDVYIEFKKHVMTARVMTDEGLEKIA 462 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSL--YALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 G+IW G EA ++GL D +GG ++ ++L Y + + K + ++ N+ Sbjct: 463 QGKIWLGNEAVEIGLADKIGGFDDCLKALLDYLNIKEYKLHFTKRKISLVDSLKNNISNI 522 Query: 267 SISSLLEDTIPLMKQTKVQGLW 288 ++ + + + +++ K + ++ Sbjct: 523 PFTAEISNELNMIQANKYKPMY 544 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 78/185 (42%), Gaps = 7/185 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + E +++I++ ++ +I+ + +A + + + + K VI + + Sbjct: 73 DFKEALKKINQTETVEEVILDVDKMELTAVQIDELKDLFKDMNKNKKVIALASNLD-NIK 131 Query: 112 YLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 Y I+ ++ I SL S+ G + Y K DK+GV + + K+ + Sbjct: 132 YRIAMLADTIYM-YNSLNSSMLLKGYSRSFIYFKKLFDKIGVKVNVLHIGDYKSAGENYH 190 Query: 169 --EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 E++ + + + D F+ + + RN+ + L+ D + +AK+ GLID Sbjct: 191 KEEMSEEQRTSITRIYDKMLENFIDEIKDRRNVDIKEKLLNGDLVLINHIKAKEYGLIDG 250 Query: 227 VGGQE 231 + + Sbjct: 251 ISNLD 255 >gi|145220224|ref|YP_001130933.1| signal peptide peptidase SppA, 36K type [Prosthecochloris vibrioformis DSM 265] gi|145206388|gb|ABP37431.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Chlorobium phaeovibrioides DSM 265] Length = 604 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 15/262 (5%) Query: 33 DNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPGG 78 + +A + I G I ++ ++R D + A++V + SPGG Sbjct: 300 EGREKLALVTISGPIVPTGSEGVEDMGEGVGEGQIRRALDRALADKNIRAIVVRIDSPGG 359 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A A ++ + +KP++ + +AAS GY+ + A I A+ ++ GSIGV Sbjct: 360 DAMASASMLEMLDSAAVKKPLVVSMSGVAASGGYMAALAGKTIYASPLTITGSIGVYALK 419 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + +K G+ V S F ++ + +M + Y FV V+ SR Sbjct: 420 PEISGLAEKTGLGRSVVTRGRYADANSLFKPLDREEYRMFVEASGEIYRDFVAKVAASRT 479 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKN 257 + + L+ GR+WTG A VGL+D GG + + L G+D + + Sbjct: 480 LSFAGADSLAGGRVWTGKRALAVGLVDRSGGLFDALREAQRLAGIDSTRHPEIVSLSEEQ 539 Query: 258 YWFCDLKNLSISSLLEDTIPLM 279 W L N + L++ ++ Sbjct: 540 GWIALLLNGDGARLMQRAERIV 561 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 29/240 (12%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------------QEL 53 ++ SL+ L V+F S V I + G + + QEL Sbjct: 21 VIVFSLLALAAVFFLQRSRSALPERFVLHIPLTGTVREHSSRSGALPFLVPMEPLSQQEL 80 Query: 54 IERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 + + R S D A+++S+ G + + +I+ V+ K VI + S Sbjct: 81 LFMLRRASGDSRVEAVLLSID---GLRAAPAKIGELRASIEAVRKGGKRVIAFLRSPEDS 137 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 L++ A + I+ A+ S + G+ + Y K L K+GVS ++ + K+ P+ Sbjct: 138 DC-LLASACDSIIVAKGSFMLLDGLRAETLYYKTALAKIGVSFQAAQWKEYKSGVEPYVR 196 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-IWTGAEAKKVGLIDV 226 S +P++ + + +++D Y ++ VS R + + + + R + T EA ++ L+D Sbjct: 197 SSPSPQSRERLGELLDDVYGEYLGYVSRRRAMAPETLERIVNTRPLMTAEEAIRLKLVDG 256 >gi|148284091|ref|YP_001248181.1| periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] gi|146739530|emb|CAM79252.1| Periplasmic serine proteases (ClpP class) [Orientia tsutsugamushi str. Boryong] Length = 305 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 14/263 (5%) Query: 33 DNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +N V+ I + G I L IE+ TA+ + ++SPGGS Sbjct: 37 NNKSVVSVIHLTGIIGKVGSFKSGLTLHTLNSVIEKAFSFKKLTAVCLVVNSPGGSPVQS 96 Query: 84 EAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I I ++ N+K PV + V ++AAS GY ++CA I A+++S++GSIGV++ + Sbjct: 97 ELIASRILQLSNQKNVPVYSFVEDVAASGGYWLACAGKKIYASKSSIIGSIGVIYMGFGL 156 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + KLG+ + S K+ PF ++++Q++ ++ F+ + R Sbjct: 157 HEAIGKLGIKRRVYTSGNNKSILDPFMPEKDSDIKIIQNLQKKIHNHFISYIKSRRGDKI 216 Query: 202 DKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + + +G W+G +A + GLID + + Y + K + Sbjct: 217 TQEDKVIYNGEFWSGEQALEYGLIDGINDMYSFLNTKYGDSIKIEYVSTKQSWIKRK--L 274 Query: 261 CDLKNLSISSLLEDTIPLMKQTK 283 + ++ SL++ T+ ++ Sbjct: 275 GLIIDIGADSLVQKTLKAIEHNA 297 >gi|229220821|ref|NP_230705.2| putative periplasmic protease [Vibrio cholerae O1 biovar El Tor str. N16961] gi|229259766|ref|YP_001216528.2| putative periplasmic protease [Vibrio cholerae O395] gi|255745477|ref|ZP_05419425.1| SohB protein peptidase U7 family [Vibrio cholera CIRS 101] gi|262158448|ref|ZP_06029564.1| SohB protein peptidase U7 family [Vibrio cholerae INDRE 91/1] gi|262170309|ref|ZP_06037996.1| SohB protein peptidase U7 family [Vibrio cholerae RC27] gi|255736552|gb|EET91949.1| SohB protein peptidase U7 family [Vibrio cholera CIRS 101] gi|262021324|gb|EEY40038.1| SohB protein peptidase U7 family [Vibrio cholerae RC27] gi|262029889|gb|EEY48537.1| SohB protein peptidase U7 family [Vibrio cholerae INDRE 91/1] Length = 353 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 101 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 220 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 278 VATGEHWFGTQAKALGLVDEIQTSDDLI 305 >gi|242239357|ref|YP_002987538.1| periplasmic protease [Dickeya dadantii Ech703] gi|242131414|gb|ACS85716.1| Peptidase S49 domain protein [Dickeya dadantii Ech703] Length = 348 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 12/207 (5%) Query: 35 SPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P + + G ++ + E+ + +D +++ L SPGG + Sbjct: 99 KPCLYVLDFNGSMDAGEVSSLREEISAVLAVARPEDE---VLLRLESPGGVVHGYGLAAS 155 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ + + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P FL Sbjct: 156 QLQRLRQKGIRLTVTVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPNFNRFLKN 215 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + ++ + K + F E + ++ ++ ++ F + VS+ R P + Sbjct: 216 KDIDVELHTAGQFKRTLTLFGENTDTGREKFREELNETHELFKQFVSQMR--PSLDIEAV 273 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G++AK++GL+DV+G +++ Sbjct: 274 ATGEHWFGSQAKELGLVDVIGTSDDLL 300 >gi|307130981|ref|YP_003882997.1| putative inner membrane peptidase [Dickeya dadantii 3937] gi|306528510|gb|ADM98440.1| predicted inner membrane peptidase [Dickeya dadantii 3937] Length = 348 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + P + + G ++ + E+ + +D +++ L SPGG + Sbjct: 93 GEDKSARPCLYVLDFNGSMDAGEVSSLREEVSAVLAVARPEDE---VLLRLESPGGVVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q+ + R + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P Sbjct: 150 YGLAASQLQRFRQRGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNF 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + ++ + K + F E + + ++ ++ ++ F + VSE R P Sbjct: 210 NRLLKSKDIDVELHTAGQYKRTLTLFGENTEEGREKFREELNETHLLFKQFVSEMR--PS 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D +G +++ Sbjct: 268 LDIESVATGEHWFGTQAKAMGLVDAIGTSDDLL 300 >gi|156933742|ref|YP_001437658.1| putative periplasmic protease [Cronobacter sakazakii ATCC BAA-894] gi|156531996|gb|ABU76822.1| hypothetical protein ESA_01568 [Cronobacter sakazakii ATCC BAA-894] Length = 349 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 106/230 (46%), Gaps = 10/230 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYA 82 P + + +G I+ + + + ++ A ++V L SPGG + Sbjct: 93 GDAAPAGKPTLYVLDFKGSIDAHE--VSALREEVTAVLAVAKPADEVLVRLESPGGVVHG 150 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q+++ R+ P+ V ++AAS GY+++C +N IVAA +++GSIGV+ Q P Sbjct: 151 YGLAASQLQRLRERQIPLTIAVDKVAASGGYMMACVANNIVAAPFAIIGSIGVVAQIPNF 210 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + + I+ + K + E + + ++ ++ ++H F V R P Sbjct: 211 NRLLKRNDIDIELHTAGQYKRTLTLLGENTEEGREKFREDLNETHHLFKEFVHSMR--PS 268 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++ G W G +AK+ GL+D + +++ + A S+R ++ Sbjct: 269 LDIDAVATGEHWYGVQAKEKGLVDEISTSDDLIIARMAEREVVSLRYMQR 318 >gi|153802311|ref|ZP_01956897.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-3] gi|124122136|gb|EAY40879.1| sohB protein, peptidase U7 family [Vibrio cholerae MZO-3] Length = 323 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 71 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 129 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 130 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 189 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 190 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 247 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 248 VATGEHWFGTQAKALGLVDEIQTSDDLI 275 >gi|110834091|ref|YP_692950.1| putative periplasmic protease [Alcanivorax borkumensis SK2] gi|110647202|emb|CAL16678.1| putative protease sohB [Alcanivorax borkumensis SK2] Length = 350 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 50/207 (24%), Positives = 104/207 (50%), Gaps = 12/207 (5%) Query: 36 PHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + + G ++ S E+ ++ ++DD ++V L SPGG ++ Sbjct: 101 PRLFVLDFNGDVQASDVDHMRREITAILQVATQDDE---VLVRLESPGGLVHSYGLASSQ 157 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++++N+ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P L K Sbjct: 158 LRRIRNQGIKLTVAVDQVAASGGYMMACIADRIVAAPFAIIGSIGVVAQIPNFHRLLKKN 217 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + E K Q+ ++ ++ F V ++R ++ Sbjct: 218 DIDVELMTAGEYKRTMTMLGENTEKGRAKFQEELEETHQLFKGFVRDNRR--GLDLDKVA 275 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 G W G++AK++GL+D + +E+ Q Sbjct: 276 TGEHWFGSQAKELGLVDEIMTSDELLQ 302 >gi|253989551|ref|YP_003040907.1| periplasmic protease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781001|emb|CAQ84163.1| putative Peptidase S49 [Photorhabdus asymbiotica] Length = 348 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 6/213 (2%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYA 82 + + P + + +G I+ + L E I I A +++ L SPGG + Sbjct: 90 AKAGQKGLQKPCLYVLDFKGSIDAHEVDSLREEISAILAVADAKDEVLLRLESPGGMVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + +++ + + V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + Sbjct: 150 YGLAASQLARLRQKGIRLTVAVDKVAASGGYMMACVADRIIAAPFAIIGSIGVVAQIPNI 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + ++ + K + E + + Q+ ++ ++ F + R P Sbjct: 210 HKLLKKNDIDVELHTAGEYKRTLTFLGENTEQGRKKFQEDLNQTHQLFKEFIHIHR--PL 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GLID VG +++ Sbjct: 268 LDVENVATGEYWYGTQAKEKGLIDEVGVSDDLL 300 >gi|327483771|gb|AEA78178.1| Possible protease sohB [Vibrio cholerae LMA3894-4] Length = 353 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 101 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 220 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 278 VATGEHWFGTQAKTLGLVDEIQTSDDLI 305 >gi|157803850|ref|YP_001492399.1| protease sohB [Rickettsia canadensis str. McKiel] gi|157785113|gb|ABV73614.1| possible protease sohB [Rickettsia canadensis str. McKiel] Length = 304 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 12/224 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGG 78 ++ D +A + + G I + L E IE+ + AL + ++SPGG Sbjct: 31 AAVFGDAKNVIAVLRLSGVIGKVSTMQSGLTLESLNELIEKAFKIKKLKALCLIINSPGG 90 Query: 79 SAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S E I + I+ + + + + + +MAAS GY ++C+ + I A +S++GSIGV+ Sbjct: 91 SPVQSELIAKRIRDLAKENKIKIYSFIEDMAASGGYWLACSGDRIYALSSSIIGSIGVVS 150 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++KLG+ + K+ PF +N +++++++ Y FV + Sbjct: 151 SGFGFHEAINKLGIERRVYTEGKNKSVLDPFQPINKDDLKIIKNLQKQVYEHFVDYIKTR 210 Query: 197 R-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + +L +G W G A GLID +G V + + Sbjct: 211 RAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDMYSVMKQKFG 254 >gi|238794712|ref|ZP_04638316.1| protease sohB [Yersinia intermedia ATCC 29909] gi|238725943|gb|EEQ17493.1| protease sohB [Yersinia intermedia ATCC 29909] Length = 348 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 101/204 (49%), Gaps = 8/204 (3%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRAIQ 91 P + I +G I D+ E+ E IS + +++ L SPGG + ++ Sbjct: 100 PCLYVIDFKGSI-DAHEVTSLREEISAVLAVASAQDEVLLRLESPGGVVHGYGLAASQLE 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P L K + Sbjct: 159 RLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPNFHRLLKKNDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + ++ ++ ++ F + V + R P ++ G Sbjct: 219 DVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--PSLDIDAVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK GL+D +G +++ Sbjct: 277 EHWFGTQAKDKGLVDAIGTSDDLL 300 >gi|23306358|gb|AAN17406.1| Unknown protein [Arabidopsis thaliana] gi|28058917|gb|AAO29968.1| Unknown protein [Arabidopsis thaliana] Length = 388 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVSL 73 W+ + +A I G I +++LIE+I + A I+ + Sbjct: 76 WTLGLTGGRDQIAIIRAGGSISRVKGPLSTPGSAIIAEQLIEKIRSVRESKKYKAAIIRI 135 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ A+N IVA +L GSIG Sbjct: 136 DSPGGDALASDLMWREIKLLAETKPVIASMSDVAASGGYYMAMAANAIVAENLTLTGSIG 195 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + +++ + + P+ ++ + +Y F Sbjct: 196 VVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPLKPEEAELFEKSAQHAYQLFRDK 255 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + SR++P DK ++ GR+WTG +A GLID VGG +K+ Sbjct: 256 AALSRSMPVDKMEEVAQGRVWTGKDAHSRGLIDAVGGLSRAIAIAKQKANIPLNKKV 312 >gi|83593953|ref|YP_427705.1| peptidase S49 [Rhodospirillum rubrum ATCC 11170] gi|83576867|gb|ABC23418.1| Peptidase S49 [Rhodospirillum rubrum ATCC 11170] Length = 593 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 4/254 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 + + S + V+ G+ D++ L I+ D A+++ + SPGGS Sbjct: 300 GLALIAASGPIVTGDGKVS--PFDGKEIDARALAATIDSAVDDAGVAAIVLRIDSPGGSY 357 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + ++RA+ + + PVI + ++AAS GY ++ +N IVA +L GSIGV+ Sbjct: 358 VGSDLVWRAVSRARQHGLPVIASMGDVAASGGYYMAMGANKIVAQPGTLTGSIGVVAGKF 417 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + LG++ V++ A S + + M ++D+ Y F + R + Sbjct: 418 TIAKASEDLGIAWGGVEAGRNAALFSLTDPFDEAGQRRMDQILDAIYADFTGKAAAGRGL 477 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIRKIKDWNPPKNY 258 + + GR+WTG +A GL+D +GG + + + G+D P + Sbjct: 478 SPEAIEEAARGRVWTGEDALAHGLVDALGGLQTAIELARTEAGLDPHAPLAITVYPKREG 537 Query: 259 WFCDLKNLSISSLL 272 L+ L + + Sbjct: 538 PEWLLRALMSAEQI 551 Score = 95.2 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 13/248 (5%) Query: 20 LTVVYFSWSSHVEDNS--PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG 77 L + + S ED P + ++ G+ + + E + + D + L+V + Sbjct: 44 LVLDLDASGSFSEDGGALPGLGFLSGEGERPSLRAVTEGLIAAASDPTVKGLMVRI--GE 101 Query: 78 GSA--YAGEAIFRAIQKVKNR-KPVITEVHEMAASAG----YLISCASNIIVAAETSLVG 130 GS + + +AI + KP I + Y ++ A + + ++G Sbjct: 102 GSLGMAQAQELRQAILAFRASGKPSIAYAETIGEFGQGTVPYYLASAVEDVWLQPSGMLG 161 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHW 188 + G + P+V+ LD LG+ + + K + + ++P +V Sbjct: 162 TTGFAVRMPFVRKLLDDLGILPQFIARKEFKDAAATATQYGMSPAQEISFGALVQGWSGQ 221 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 VR V+E+R + D+ L D AEA + GLID +G +E +++ Sbjct: 222 VVRAVAEARGLSEDQVRGLIDRSPLLAAEALESGLIDRLGYPDEARKAMGERAGTDEHLS 281 Query: 249 IKDWNPPK 256 + + + Sbjct: 282 VGQYAERQ 289 >gi|253688400|ref|YP_003017590.1| Peptidase S49 domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754978|gb|ACT13054.1| Peptidase S49 domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 348 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 8/205 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRAI 90 P + + G D+ E+ E IS + +++ L SPGG + + Sbjct: 99 KPCLYVLDFNGS-MDAGEVSSLREEISAVLAVAKPQDEVLLRLESPGGVVHGYGLAASQL 157 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q+++ + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L Sbjct: 158 QRLRQGGVRLTVAVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNFHRLLKNKD 217 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++ + K + F E + + ++ ++ ++ F V + R P ++ Sbjct: 218 IDVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHTLFKDFVQQMR--PSLDIDSVAT 275 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVW 234 G W G +AK +GLID +G +++ Sbjct: 276 GEHWFGTQAKDLGLIDAIGTSDDLL 300 >gi|228962557|ref|YP_751249.2| putative periplasmic protease [Shewanella frigidimarina NCIMB 400] Length = 336 Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 12/211 (5%) Query: 34 NSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 V I +G I+ + QE+ I +DD ++V++ S GG + Sbjct: 88 TKGKVFVIDFKGSIDANEVSSLRQEVTAIITIADKDDQ---VLVNVESGGGMVHGYGLAS 144 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 145 SQLDRLRQANIPLSICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVIAQIPNFNRLLK 204 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + + + K + F E + Q ++ ++ F V R P Sbjct: 205 NHDIDYEQHTAGDFKRTLTVFGENTDEGRAKFQQELEETHVLFKEFVGRYR--PNMDIAK 262 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A +GLID V ++V L Sbjct: 263 VATGEHWYGQQAIDLGLIDAVSTSDDVILDL 293 >gi|114335029|gb|ABI72411.1| Peptidase S49, N-terminal domain protein [Shewanella frigidimarina NCIMB 400] Length = 340 Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 12/211 (5%) Query: 34 NSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 V I +G I+ + QE+ I +DD ++V++ S GG + Sbjct: 92 TKGKVFVIDFKGSIDANEVSSLRQEVTAIITIADKDDQ---VLVNVESGGGMVHGYGLAS 148 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + +++ P+ V ++AAS GY+++C +N + AA ++VGSIGV+ Q P L Sbjct: 149 SQLDRLRQANIPLSICVDKVAASGGYMMACVANKVYAAPFAIVGSIGVIAQIPNFNRLLK 208 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + + + K + F E + Q ++ ++ F V R P Sbjct: 209 NHDIDYEQHTAGDFKRTLTVFGENTDEGRAKFQQELEETHVLFKEFVGRYR--PNMDIAK 266 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A +GLID V ++V L Sbjct: 267 VATGEHWYGQQAIDLGLIDAVSTSDDVILDL 297 >gi|118467630|ref|YP_885858.1| signal peptide peptidase SppA, 67K type [Mycobacterium smegmatis str. MC2 155] gi|118168917|gb|ABK69813.1| signal peptide peptidase SppA, 67K type [Mycobacterium smegmatis str. MC2 155] Length = 594 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQI----------------EDSQELIERIERISRDDSATALIVSLSSP 76 + P +A + + G I + + + +D A+++ + SP Sbjct: 298 KSKPTIAVVTLHGAIVSGRGGPQPLPFGRSSAGGDTIAAALREAAANDDVAAVVLRVDSP 357 Query: 77 GGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS E ++R + + ++ KPV+ + +AAS GY +S A++ IVA ++ GSIGVL Sbjct: 358 GGSVTGSETVWREVVRTRDAGKPVVASMGAVAASGGYYVSMAADEIVANAGTITGSIGVL 417 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + DKLGV +V+++ S + + ++ D Y FV +E Sbjct: 418 TGKFVSRELKDKLGVGSDAVRTNANADAWSTNAPFTDEQHARVEAEADLLYRDFVERAAE 477 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R +P ++ L+ GR+WTG++AK+ GL+D VGG L + P Sbjct: 478 GRKLPIEEMESLARGRVWTGSDAKERGLVDHVGGLRAAVTRAKVLAGFDEDADARVVAYP 537 Query: 256 KNYWFCDLKNLSISSLLEDTIP 277 + W L+ S ++P Sbjct: 538 GSSWLDMLRPKPSSQPAAASLP 559 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 3/225 (1%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +A IA G+ ++ + I R + DD LI + P + + + AI RK Sbjct: 52 LAMIAGGGRPLVLRQAVAAIHRAAEDDRVAGLIARVQLPAAAPGPVQELRDAIVAFGERK 111 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P + + Y ++ A I VG IG +++ LDK G+ + + Sbjct: 112 PTVAWAETYPGTMSYYLASAFREIWMQPAGSVGLIGFATNATFLRDALDKAGIEAQFIAR 171 Query: 158 SPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K+ + F+E + +++S + +++SR + D L+D Sbjct: 172 GEYKSAANVFTEGSYTEPHREADARLIESLQEQVWQGIAQSRGLDPDTINTLADQAPLLR 231 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYW 259 A GL+D +G ++E ++ + L G ++ D PP+ + Sbjct: 232 EAAVTAGLVDRIGFRDEAYKRIGELAGGPENTDADHDDAPPRLFL 276 >gi|325292019|ref|YP_004277883.1| protease SohB [Agrobacterium sp. H13-3] gi|325059872|gb|ADY63563.1| protease SohB [Agrobacterium sp. H13-3] Length = 288 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 14/269 (5%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ A A+ +S++SPGGS I+ Sbjct: 19 IPVVRMHGAIMAGGNQFRPALNLASYAPLLEKAFAVKDAPAVAISVNSPGGSPVQARMIY 78 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ L Sbjct: 79 NRIRQLAEEKDKKVLIFVEDVAASGGYMIALAGDEIIADPTSIVGSIGVVSGGFGFPEML 138 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF ++ ++ + ++ F+ +V R Sbjct: 139 KKIGVERRVYTAGENKVILDPFQPEKEGDIEYLKSLQVEIHNVFIDMVKMRRGAKLKGDE 198 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD-QSIRKIKDWNPPKNYWFCDLK 264 + G WTG +GLID +G EV + Y V Q + + K Sbjct: 199 TVFSGLFWTGMRGLDLGLIDGLGDMREVLRRRYGTKVKLQLVTGGRSLFGKKVPGVNAAL 258 Query: 265 NLSISSLLEDTI-PLMKQTKVQGLWAVWN 292 L+ L + L + + + LW+ + Sbjct: 259 GLNAERLAAGAVSGLAEVAEEKALWSRFG 287 >gi|218682938|ref|ZP_03530539.1| putative peptidase [Rhizobium etli CIAT 894] Length = 286 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 116/272 (42%), Gaps = 21/272 (7%) Query: 37 HVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + + ++G I + +E+ A A+ ++++SPGGS I Sbjct: 19 TIPVVRLQGAIVSGGGQFRPALNLANVSPVLEKAFAMKDAPAVAITINSPGGSPVQSRLI 78 Query: 87 FRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F I+++ +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 79 FTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIADATSIVGSIGVVSGGFGFPEL 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV + + K PF K ++ ++ + + F+ +V E R Sbjct: 139 LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHQVFIAMVRERRAGKLKDD 198 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G W+G ++GL+D +G + + Y K++ + + + Sbjct: 199 AAVFSGLFWSGTRGLELGLVDGLGDMRQELKRRYG-----QKTKLELVTAGRGLFGRRIP 253 Query: 265 NLSI----SSLLEDTIPLMKQTKVQGLWAVWN 292 +S S+ L++ + + LW+ + Sbjct: 254 GVSPVTLESAASGLATGLVEAAEERALWSRFG 285 >gi|254428540|ref|ZP_05042247.1| Peptidase family S49 N-terminal [Alcanivorax sp. DG881] gi|196194709|gb|EDX89668.1| Peptidase family S49 N-terminal [Alcanivorax sp. DG881] Length = 345 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 104/207 (50%), Gaps = 12/207 (5%) Query: 36 PHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + + G ++ S +E+ ++ S+DD ++V L SPGG ++ Sbjct: 96 PRLFVLDFDGDVQASGVDHLRREITAVLQVASQDDE---VLVRLESPGGLVHSYGLASSQ 152 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++++N+ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P L K Sbjct: 153 LRRIRNQGIKLTIAVDQVAASGGYMMACIADRIVAAPFAIIGSIGVVAQIPNFHRLLKKN 212 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + E K Q+ ++ ++ F V ++R ++ Sbjct: 213 DIDVELMTAGEYKRTMTMLGENTEKGRAKFQEELEDTHQLFKGFVRDNRR--GLDLDKVA 270 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 G W G +AK++GL+D + +E+ Q Sbjct: 271 TGEHWFGTQAKELGLVDEIMTSDELLQ 297 >gi|238757073|ref|ZP_04618261.1| protease sohB [Yersinia aldovae ATCC 35236] gi|238704903|gb|EEP97432.1| protease sohB [Yersinia aldovae ATCC 35236] Length = 348 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + + P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGAIAAVKPCLYVIDFKGSI-DAHEVTSLREEISAVLAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|27366259|ref|NP_761787.1| putative inner membrane peptidase [Vibrio vulnificus CMCP6] gi|37679482|ref|NP_934091.1| putative periplasmic protease [Vibrio vulnificus YJ016] gi|320156768|ref|YP_004189147.1| putative protease sohB [Vibrio vulnificus MO6-24/O] gi|27362460|gb|AAO11314.1| SohB protein, peptidase U7 family [Vibrio vulnificus CMCP6] gi|37198226|dbj|BAC94062.1| periplasmic serine protease [Vibrio vulnificus YJ016] gi|319932080|gb|ADV86944.1| possible protease sohB [Vibrio vulnificus MO6-24/O] Length = 353 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 8/205 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAIFRAI 90 PH+ + G I D++E+ E I+ + +++ L S GG + + Sbjct: 104 EPHLFVLDFNGSI-DAKEVKSLREEITAILAVAGEGDEVLLRLESGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 163 DRIKAAGLPLTIAVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA + + ++ ++ F + E R P + ++ Sbjct: 223 IEFEQMTAGEYKRTLTMFGENTDKAREKFKQELEETHDLFKDFIRERR--PELELEKVAT 280 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVW 234 G W G +A +GL+D + +++ Sbjct: 281 GEHWFGTQAHALGLVDDIATSDDLI 305 >gi|302782103|ref|XP_002972825.1| hypothetical protein SELMODRAFT_173134 [Selaginella moellendorffii] gi|300159426|gb|EFJ26046.1| hypothetical protein SELMODRAFT_173134 [Selaginella moellendorffii] Length = 559 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 15/271 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLS 74 W+ + +A + G I S IE+I ++ + A+++ + Sbjct: 254 WTLGLSGGKADIAVLRAVGNISRQKQMGFTGSGISSDTFIEQIRQVREAKNFKAVVLRID 313 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A A + ++R ++ + +KPVI + ++AAS GY ++ A+ +IVA +L GSIGV Sbjct: 314 SPGGDALASDLMWRELRLLAAKKPVIASMVDVAASGGYYMAMAAGVIVAERLTLTGSIGV 373 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + +++G + + + + P+ + ++Y F + Sbjct: 374 VTGKLNLGKLYERVGFTKEVISRGKFAELDAEQRPFRPEEAEFFGKSAKTAYKRFRDTAA 433 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKD 251 SR++ +K ++ GR+WTG A GL+D +GG + + + ++ ++ ++ Sbjct: 434 LSRSMQIEKMEEVAQGRVWTGKAAAARGLVDTLGGFSKAVAIAKQKAGISLESKVKLVEL 493 Query: 252 WNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 N L + LL + + Sbjct: 494 SRSKPNIVSFLRGGLQVLVLLPRLLDELNAN 524 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 92/234 (39%), Gaps = 20/234 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-----EAIFRAIQKVKNR-KPVITEVHE 105 ++ + + + + D A+IV + + + I R I+ K KP++ + Sbjct: 40 QICQNLIKAAHDPRIAAVIVQVE-----PLSCGWPKVDEICRHIEYYKQSGKPLVGYL-- 92 Query: 106 MAASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A G Y ++C+ + A + + +G+ Q +V L+K+GV + + K+ Sbjct: 93 --AVGGEKEYYLACSCGDVFAPPGAYISLLGLKVQAQFVGGVLEKIGVQPQIERIGKYKS 150 Query: 163 EPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 S +++ +M+ ++D Y ++ LV+ + L + I+ + + Sbjct: 151 VGDLLSRKDMSDANREMLTAILDDVYENWLDLVNIFAGKTTAEVENLLEEGIFEIEKLHQ 210 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 G I V +++V + + + K + + Y L +S D Sbjct: 211 QGWISDVKYEDQVIEEMLKAKLQIKDDKSPKYVDYRKYSRVREWTLGLSGGKAD 264 >gi|154150450|ref|YP_001404068.1| signal peptide peptidase SppA, 36K type [Candidatus Methanoregula boonei 6A8] gi|153999002|gb|ABS55425.1| signal peptide peptidase SppA, 36K type [Methanoregula boonei 6A8] Length = 282 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 14/249 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNS-PHVARIAIRGQIEDSQELIE----------R 56 +K +++ + L +V F + D V I + G ++ + + + Sbjct: 21 LKWLLIIIGGLFLVIVIFGAVYLLSDTQHAGVKVIRMEGTLDTGDFIADDSVGSEYVGNQ 80 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 + + D A+++ + SPGGS A E I ++ K +KPV+ + MA SA Y +S Sbjct: 81 LRDAADDPMVDAIVLRVDSPGGSPAAAEEIIGDLEYAKTKKPVVVSMGSMATSAAYYVSA 140 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 +N I A +L G++GV++ + + ++ + G ++ VKS K + + P Sbjct: 141 HANEIYADPDTLTGAVGVIWTFSDISDWMKQEGYNVTVVKSGDFKDMGADSHALTPAEQA 200 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q +V+ S+ F+ V+ R I DGR+ GA+A K+ L+D +G + + Sbjct: 201 YAQQIVNESFQEFINDVTTQRMIAKSDIE---DGRVIRGADAIKINLVDKLGNLNDAIEG 257 Query: 237 LYALGVDQS 245 L +S Sbjct: 258 AQDLADARS 266 >gi|226363309|ref|YP_002781091.1| S49 family peptidase [Rhodococcus opacus B4] gi|226241798|dbj|BAH52146.1| putative S49 family peptidase [Rhodococcus opacus B4] Length = 288 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 21/268 (7%) Query: 38 VARIAIRGQIED----------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 V + ++G I ++ + E + R S A A+ + ++SPGGS E I Sbjct: 28 VPVVRLQGMIASGGAGFGRVLSAESVEEPLRRASTTHGAKAVALLINSPGGSPTQSEYIA 87 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ PV+ ++ AS GY ++CA++ I A TS+VGS+GV+ + Sbjct: 88 ARIRQLATEHELPVLAFCEDVVASGGYWLACAADEIYATATSVVGSVGVISAGFGFSELI 147 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 D+LG+ + + KA PF + VQ ++ + + + F V R Sbjct: 148 DRLGIERRLHSAGEAKARLDPFFAEKSEDVQWLEQIQEGIHDEFRDWVVGRRGDKLKAAE 207 Query: 206 -VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L DG +W G A ++G++D +G EV + + + P+ F L Sbjct: 208 AELFDGDVWLGRRAVELGIVDGIGTLREVVEKRFPDA-------TIEMTGPRRSLFAKL- 259 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 L +S + T ++ + W+ + Sbjct: 260 GLPAASWDDVTAAILGAANARVAWSRYG 287 >gi|290475296|ref|YP_003468184.1| putative peptidase [Xenorhabdus bovienii SS-2004] gi|289174617|emb|CBJ81411.1| putative peptidase [Xenorhabdus bovienii SS-2004] Length = 348 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 ++ + +G ++ + L E I I DS +++ L SPGG + + Sbjct: 99 KSNLYVLDFKGSMDAHEVDSLREEISAILAVADSKDEVLLRLESPGGMVHGYGLAASQLA 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + L K + Sbjct: 159 RLRQKGIRLTIAVDKVAASGGYMMACVADRIIAAPFAIIGSIGVVAQLPNIHRLLKKNDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + E + Q Q+ ++ ++ F + + R P ++ G Sbjct: 219 DVELHTAGEYKRTLTVLGENTEQGRQKFQEDLNETHQLFKSFIYQHR--PSLDVEKVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK+ GLID VG ++ Sbjct: 277 EYWYGTQAKENGLIDDVGVSDDFL 300 >gi|311279820|ref|YP_003942051.1| Peptidase S49 domain-containing protein [Enterobacter cloacae SCF1] gi|308749015|gb|ADO48767.1| Peptidase S49 domain protein [Enterobacter cloacae SCF1] Length = 347 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 17/258 (6%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRA 89 + V + +G D+ E+ E ++ + +++ L SPGG + Sbjct: 97 DKSRVWVLDFKGS-MDAHEVNALREEVTAVLAVVKPQDQVVLRLESPGGVVHGYGLAASQ 155 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q++++++ P+ V ++AAS GY+++C N IV A +++GSIGV+ Q P FL Sbjct: 156 LQRLRDKQVPLTIAVDKVAASGGYMMACVGNKIVCAPFAIIGSIGVVAQIPNFNRFLKGK 215 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + I+ + K + E + Q ++ ++ ++H F V R P ++ Sbjct: 216 DIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKDFVHSMR--PQLDIEQVA 273 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G W G++AK+ GL+D +G +++ L L D + ++ K L + Sbjct: 274 TGEHWYGSQAKEKGLVDDIGTSDDL---LLGLMKDHEVLNVRYLQRKK------LLDRVT 324 Query: 269 SSLLEDTIPLMKQTKVQG 286 S E L+ + +G Sbjct: 325 GSAAESADRLLMRWWQRG 342 >gi|303245308|ref|ZP_07331592.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] gi|302493157|gb|EFL53019.1| signal peptide peptidase SppA, 36K type [Desulfovibrio fructosovorans JJ] Length = 433 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 103/210 (49%), Gaps = 10/210 (4%) Query: 38 VARIAIRGQ----------IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +A + + G I ++E+ + + + D S A+++ + SPGG+ E + Sbjct: 55 LAVVDMSGPLSKDGSYWWGIGSTREIGAGLLQAAADPSVKAILLDVDSPGGTVDGTEELA 114 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + V +KP+ ++ ASA Y I + I ++ +GSIGV+ + + ++ Sbjct: 115 GIARIVAAQKPLYVYASDLMASAAYWIGSQAKEIGTQASAQIGSIGVVLTHTDWSGWDEQ 174 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV I + + KA +P ++ +A +Q +D Y F+ V+ R + ++ + + Sbjct: 175 MGVDITYLTAGHFKAMGNPDEPLSDEARAYLQQQLDEVYGLFLDAVAAGRRVSREQAMAM 234 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +DG+I+ G +A ++GL+D + + + + Sbjct: 235 ADGKIFLGRQALELGLVDRLESRADFINRI 264 >gi|330813966|ref|YP_004358205.1| macromolecule degradation protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487061|gb|AEA81466.1| macromolecule degradation protein [Candidatus Pelagibacter sp. IMCC9063] Length = 267 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 13/251 (5%) Query: 38 VARIAIRGQIEDSQELI---------ERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A I + G I + E I++ A+ ++++SPGGS ++ Sbjct: 9 IAHIRLSGVIGNVGRFQQGLSYASHHEIIKKAFSLKKIKAVAITINSPGGSPVQSHLLYS 68 Query: 89 AIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+K+ + K V IT ++AAS GY+++CA + I A +S++GSIGV++ + + Sbjct: 69 LIRKLADEKKVKVITFAEDVAASGGYMLACAGDEIYANASSILGSIGVIYSGFGFQELIK 128 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 K GV + + K+ PF E P+ +Q ++ + + + F+ LV SR Sbjct: 129 KAGVERRVHTAGTSKSILDPFVEEKPEDIQKLKAIQEELHKEFILLVKNSRKGKITLADD 188 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD-QSIRKIKDWNPPKNYWFCDLK 264 L G W G+++K++GLID +G +V + + V ++ K + W K Sbjct: 189 KLFTGEFWAGSKSKELGLIDGIGNMFQVIEDQFGKDVKVKNFEKQEGWLKKKLSSSMANA 248 Query: 265 NLSISSLLEDT 275 SI S LE Sbjct: 249 ASSIVSELETR 259 >gi|159464533|ref|XP_001690496.1| signal peptide peptidase [Chlamydomonas reinhardtii] gi|158279996|gb|EDP05755.1| signal peptide peptidase [Chlamydomonas reinhardtii] Length = 745 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 107/231 (46%), Gaps = 2/231 (0%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 G + +I ++ +++D S A+++ + SPGG A A + ++R I+++ KPVI + Sbjct: 387 SGSVITPDGVIPKLRALAKDKSVAAVVLRVDSPGGDALAADLMWREIRQLDAVKPVIASM 446 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY + A+ IVA ++ GSIGV+ + K+G + + + Sbjct: 447 ADVAASGGYYMGMAARAIVAEPLTITGSIGVVTGKFNLSELYAKIGYNKELISWGRFAEL 506 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + + + ++ +Y F + SR++ + ++ GR+W+G A KV L Sbjct: 507 LADNRSFSKEEAELFDASAQHAYESFRNKAASSRDMDVEDMQAVAQGRVWSGNAAIKVKL 566 Query: 224 IDVVGGQEEVWQ-SLYALGVDQSIR-KIKDWNPPKNYWFCDLKNLSISSLL 272 +D +GG + +A G+ + + + + +++ L Sbjct: 567 VDALGGVNRAIAMARHAAGIPAEEPVTVVELGKVRPSPTALIGGGAMAGAL 617 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 79/220 (35%), Gaps = 35/220 (15%) Query: 43 IRGQIEDSQE-----------LIERIERISRDDSATALIVSLSSPGGSAYA-----GEAI 86 + G I D + L + + + + D + + + + A + I Sbjct: 108 LEGDISDQERTFFDSGTSLPALCQALRKAALDPRIQGVAIEI-----APLAIGWGKVQEI 162 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 R I + K + + + AG Y ++ A + + A ++ + G + +++ Sbjct: 163 KRHIDYFRASGKYCVAYMKQ----AGEKEYYLATACSEMYAPPSAYLSLRGFVTGGTFLR 218 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 LDK+GV + + K+ + + + + + F+R VS + Sbjct: 219 GVLDKVGVEPQVKRIGAYKSAGDQLLRRTMASEQREQLGAIQADVVEEFLRQVSTALGKS 278 Query: 201 YDKTLVLSDGRIWTGAEAKKVG--LIDVVGGQEEVWQSLY 238 + + + ++ A K G L D + ++++ L Sbjct: 279 RQEVVEFVEAGVYD-TAAFKAGGWLTD-LWYEDQLINELK 316 >gi|153816961|ref|ZP_01969628.1| sohB protein, peptidase U7 family [Vibrio cholerae NCTC 8457] gi|126512548|gb|EAZ75142.1| sohB protein, peptidase U7 family [Vibrio cholerae NCTC 8457] Length = 255 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 3 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 61 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 62 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 121 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + E R P Sbjct: 122 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHR--PALDLDK 179 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 180 VATGEHWFGTQAKALGLVDEIQTSDDLI 207 >gi|241203318|ref|YP_002974414.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857208|gb|ACS54875.1| peptidase S49 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 286 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 21/272 (7%) Query: 37 HVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + + ++G I + +E+ A A+ +S++SPGGS I Sbjct: 19 TIPVVRLQGAIISGGGQFRPTLNLANVSPVLEKAFAMKDAPAIAISINSPGGSPVQSRLI 78 Query: 87 FRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F I+++ +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 79 FTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIADATSIVGSIGVVSGGFGFPEL 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV + + K PF K ++ ++ + + F+ +V E R Sbjct: 139 LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHQVFISMVRERRASKLRDD 198 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G W+G ++GLID +G + + Y K++ + + + Sbjct: 199 ATVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG-----QKTKLELVTAGRGLFGRRIP 253 Query: 265 NLSISSLLEDTI----PLMKQTKVQGLWAVWN 292 +S SL + L++ + + LW+ + Sbjct: 254 GVSPVSLEDAASGLATGLVEAAEERALWSRFG 285 >gi|323491950|ref|ZP_08097119.1| putative inner membrane peptidase [Vibrio brasiliensis LMG 20546] gi|323313808|gb|EGA66903.1| putative inner membrane peptidase [Vibrio brasiliensis LMG 20546] Length = 353 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 15/258 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 101 SKREPHLFVLDFKGSIDAKEVASLREEVTAILAVAREGD--EVLLRLESGGGMVHGYGLA 158 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 159 SSQLDRIKAANLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVL 218 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E KA + ++ ++ F + E R P + Sbjct: 219 KKYDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHGLFKDFIRERR--PELELD 276 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A K+GL+D + +++ +I ++ K L Sbjct: 277 KVATGEHWFGTQAHKLGLVDEIKTSDDIVVEACKDKTVLAIHYVE-----KKKLTSKLAG 331 Query: 266 LSISSLLEDTIPLMKQTK 283 L+ + + L+ + + Sbjct: 332 LAGEAADNVLMKLIDRGQ 349 >gi|115526406|ref|YP_783317.1| peptidase S49 [Rhodopseudomonas palustris BisA53] gi|115520353|gb|ABJ08337.1| peptidase S49 [Rhodopseudomonas palustris BisA53] Length = 300 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 25/277 (9%) Query: 36 PHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V + + G I L +ER A A+ ++++SPGGS I Sbjct: 28 PVVPVVRLSGVIGAVTPLRPGLSLAGLARTLERAFAVPHAKAVALAINSPGGSPVQSRLI 87 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+++ K PVI V ++AAS GY+++CA + I +S++GSIGV+ Sbjct: 88 YLRIRQLAAEKKLPVIAFVEDVAASGGYMLACAGDEIYCDPSSILGSIGVVGGTFGFPEL 147 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 L K+GV + + KA+ PF +P V ++ + + F+ LV +SR I Sbjct: 148 LKKIGVERRIYTAGEHKAQLDPFLPEDPDDVARVKALQREIHAIFIALVKDSRGIRLKGD 207 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G W G + +GL D +G + ++ + V + PP Sbjct: 208 EGKLFSGEYWAGDSSIALGLADGIGDLRSILRTRFGDKVLTPVVA-----PPTGMLAGLF 262 Query: 264 KNLSISSLLEDTIPL--------MKQTKVQGLWAVWN 292 + ++ + ++ + + + LWA + Sbjct: 263 NRRAAATSMLGSVDAAADWPDQVISALETRALWAKYG 299 >gi|167470520|ref|ZP_02335224.1| peptidase, S49 family protein [Yersinia pestis FV-1] Length = 321 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S V P + I +G I +QE+ E IS + +++ L SPGG + Sbjct: 90 AKSGAVAAVKPCLYVIDFKGSI-GAQEVSSLREEISAILAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +++ R + V ++AAS GY+++C ++ I+ A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLARLRQRGIRLTVAVDKVAASGGYMMACVADRIICAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|328474635|gb|EGF45440.1| putative inner membrane peptidase [Vibrio parahaemolyticus 10329] Length = 353 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 10/209 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 101 SKREPHLFVLDFNGSIDAKEVASLREEITAILAVAREGD--EVLLRLESGGGMVHGYGLA 158 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 159 SSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLL 218 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E KA + ++ ++ F + E R P + Sbjct: 219 KKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELE 276 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK++GL+D + +++ Sbjct: 277 KVATGEHWFGTQAKELGLVDEISTSDDLV 305 >gi|262165297|ref|ZP_06033034.1| SohB protein peptidase U7 family [Vibrio mimicus VM223] gi|262025013|gb|EEY43681.1| SohB protein peptidase U7 family [Vibrio mimicus VM223] Length = 353 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 101 SKREPHLFVLDFHGSI-DAKEVASLREEVSAILAVAKAGDEVLLRLETGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + + R P Sbjct: 220 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHR--PALDLDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +AK +GL+D + +++ Sbjct: 278 VATGEHWFGTQAKTLGLVDEIQTSDDLIVEA 308 >gi|145225602|ref|YP_001136280.1| signal peptide peptidase SppA, 67K type [Mycobacterium gilvum PYR-GCK] gi|145218088|gb|ABP47492.1| signal peptide peptidase SppA, 67K type [Mycobacterium gilvum PYR-GCK] Length = 595 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + SPGGS A E I+R + + + PV+ + +AAS GY +S A++ IVA ++ G Sbjct: 354 RVDSPGGSVTASETIWREVVRARESGTPVVASMGSVAASGGYYVSMAADAIVANPATITG 413 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + ++LGV SV+++ S + + + D Y FV Sbjct: 414 SIGVVTGKLVARDLKERLGVGSDSVRTNANADAWSINAPFTEEQHAQVAAEADLFYDDFV 473 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD------- 243 V+E R + D ++ GR+WTGA+A GL+D +GG AL Sbjct: 474 ARVAEGRGLSVDAVEKVARGRVWTGADALDRGLVDELGGLRTAVTRAKALAGIDEDTKVE 533 Query: 244 ------QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK--VQGLWAVW 291 S+R + P L L + ++ ++ QT+ + G+ A+W Sbjct: 534 LQMLPGASLRDVLRPKPSSQPAAASLPELLGALAIQSVAGVVDQTQRSLSGVNALW 589 Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 10/204 (4%) Query: 51 QELIERIERISRDDSATALI--VSLSS--PGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +E + + R + D LI V + + PG A + + AI +KP + Sbjct: 65 REAVSALHRAAEDPRVAGLIARVQIDAAAPG----AVQELREAIVAFTAKKPSLAWAETY 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + Y ++ A + + +G +G +++ LDKLGV + + K+ P+ Sbjct: 121 PGTLSYYLASAFGEVWMQPSGTLGLVGFATNALFLRDALDKLGVEAQFIAKGEYKSAPNL 180 Query: 167 FSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 F+E + +V+ V+ SR I L+D +A GLI Sbjct: 181 FTEDRYTEPHREADTALVNGLRTQVWDAVAASRGIDVATLDALADRAPLLRDDAVTAGLI 240 Query: 225 DVVGGQEEVWQSLYALGVDQSIRK 248 D VG ++E + + + + Sbjct: 241 DRVGFRDEAYARIADMAGADGVSP 264 >gi|90425823|ref|YP_534193.1| peptidase S49 [Rhodopseudomonas palustris BisB18] gi|90107837|gb|ABD89874.1| peptidase S49 [Rhodopseudomonas palustris BisB18] Length = 302 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 12/217 (5%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + + G I L + ++R +A A+ ++++SPGGS I+ Sbjct: 33 VPVVRLSGVIGAVTPLRPGLSLAGTAKMLDRAFATRNAKAVALAINSPGGSPVQSRQIYL 92 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ K PVI V ++AAS GY+++CA++ I +S+VGSIGV+ L Sbjct: 93 RIRQLAAEKKLPVIAFVEDVAASGGYMLACAADEIYVDPSSIVGSIGVVGGTFGFPELLK 152 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+GV + + KA+ PF +P+ V ++ + + F+ LV +SR Sbjct: 153 KIGVERRLYTAGEHKAQLDPFLPEDPEDVARVKALQREIHAMFISLVKDSRGAKLKGAED 212 Query: 207 -LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G W G + +GL D +G ++ + V Sbjct: 213 LLFSGEYWAGGTSVTLGLSDGIGDLRGTLRARFGDKV 249 >gi|254496591|ref|ZP_05109459.1| signal peptide peptidase [Legionella drancourtii LLAP12] gi|254354215|gb|EET12882.1| signal peptide peptidase [Legionella drancourtii LLAP12] Length = 321 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 19/284 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIEDS-----QELIERIERISR 62 R + L ++ F E + PHV I + G+I D+ + + +E + Sbjct: 42 RVIYLLIIGFAAYQFFGGGVDESGSNTKPHVGLIDLSGEIFDAKPANADDFAKGMESAYK 101 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASN 119 + A++V ++SPGGS E ++ I+ + + P V + ++ ASA Y ++ A++ Sbjct: 102 NSGLKAVVVRINSPGGSPVQAEYMYNTIKYYRAKHPEIKVYSVCVDLCASAAYYVAVAAD 161 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I A+ S+VGSIGV++ ++K+GV+ + + K PFS + Q +Q Sbjct: 162 DIYASPASMVGSIGVIYSGFGFVDAINKIGVTRRLQTAGANKGFLDPFSPDSDSQKQKLQ 221 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++D + F+ V + R G IWTG +A +GLID ++ + + Sbjct: 222 VMLDIVHEQFINKVKDGRGSRLHSDNDTFSGLIWTGEQALPLGLIDGFASSGQLARDVI- 280 Query: 240 LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 I + D+ +N + KNL + + D +PL K Sbjct: 281 -----KIDSMIDYTHKQNLFDRVTKNLGTA--MADELPLSLGIK 317 >gi|89074059|ref|ZP_01160560.1| putative sohB protein, peptidase U7 family protein [Photobacterium sp. SKA34] gi|89050197|gb|EAR55708.1| putative sohB protein, peptidase U7 family protein [Photobacterium sp. SKA34] Length = 353 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 11/234 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 S P + I RG I D++E+ E I+ + +++ L + GG + Sbjct: 97 GSLETSRDPRLFVIDFRGSI-DAREVSSLREEITAILAVAIEGDEVLLRLETGGGMVHGY 155 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K + V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 156 GLASSQLDRLKASGIKLTIAVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQLPNFN 215 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E KA + Q ++ ++ F ++ R P Sbjct: 216 KVLKKNDIDYEQITAGEFKRTLTMFGENTDKAREKFQMEIEETHGLFKNFIAAHR--PDL 273 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G W G +A +GL+D + +++ ++ + K+K K Sbjct: 274 DLEKVATGEHWFGQQAFDLGLVDQISTSDDLITEACK---EREVLKVKYVRRKK 324 >gi|293609754|ref|ZP_06692056.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828206|gb|EFF86569.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 320 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + L E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENLREEITLILA--TAKAGRDRIVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I+AA ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAAPFAIVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGEDALDLNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + ++ L Sbjct: 284 LQAAQMADSLIPTVMSKVMESL 305 >gi|297181012|gb|ADI17213.1| periplasmic serine proteases (clpp class) [uncultured delta proteobacterium HF0070_10I02] Length = 524 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 16/263 (6%) Query: 38 VARIAIRGQIED-------------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA + + G + + S +++ IE ++ ++ A++++++SPGGSA A + Sbjct: 231 VAVVHLDGPVVERREQMPRSGRVIASDDVVPVIEELTDNEQIKAVVLAVNSPGGSALASD 290 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I R++ +K +KPV+ + +AAS GY IS ++ I A + ++ GSIGV+ + Sbjct: 291 LISRSVMALKEKKPVLASMGNVAASGGYYISAEAHEIWAHKATITGSIGVVGGKLVLGSA 350 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L KLGV + +P +P + +P+ + + + Y F+ +V+ R D+ Sbjct: 351 LGKLGVHSSWMGPAPDPGLLAPHTRFHPEQRRRFRASLRRVYDRFISIVASGRGKTTDEI 410 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEE---VWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ GR+WTG++A GL+D +G ++ +L ++ ++PPK Sbjct: 411 EPVAQGRVWTGSQAMDNGLVDSLGTLKDAVRAAAVRASLNPERIKTIPVRFDPPKFGALS 470 Query: 262 DLKNLSISSLLEDTIPLMKQTKV 284 + L+ + + Sbjct: 471 QFMRAGTHTPLDMAVGFAGADGL 493 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 2/144 (1%) Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I AI+ V +T + L++ A++ I + V GV + Sbjct: 41 EIHAAIRSVAESGTRVTAYLTSGSDREILLASAAHHITMPPPAEVYLTGVAASVRFYGSA 100 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +LGV + K+ ++ P+ + M ++ + ++ + + R++ Sbjct: 101 LQRLGVEADLESAGAYKSFGEAYTRSAPTPENREAMDHLLGDLHDNWLETLGQGRSMEVA 160 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDV 226 + + A + GLID Sbjct: 161 QLDDALRSAPLSSENAVQRGLIDA 184 >gi|251789767|ref|YP_003004488.1| putative periplasmic protease [Dickeya zeae Ech1591] gi|247538388|gb|ACT07009.1| Peptidase S49 domain protein [Dickeya zeae Ech1591] Length = 348 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 12/213 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + P + + G ++ + E+ + +D +++ L SPGG + Sbjct: 93 GEEKSARPCLYVLDFNGSMDAGEVSSLREEVSAVLAVARPEDE---VLLRLESPGGVVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q+ + R + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P Sbjct: 150 YGLAASQLQRFRQRGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIVGSIGVVAQIPNF 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + ++ + K + F E + + + ++ ++ F + V E R P Sbjct: 210 NRLLKSKEIDVELHTAGQYKRTLTLFGENTEEGREKFRQELNETHLLFKQFVGEMR--PS 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK++GL+D +G +++ Sbjct: 268 LDIESVATGEHWFGTQAKEMGLVDAIGTSDDLL 300 >gi|302383896|ref|YP_003819719.1| signal peptide peptidase SppA, 67K type [Brevundimonas subvibrioides ATCC 15264] gi|302194524|gb|ADL02096.1| signal peptide peptidase SppA, 67K type [Brevundimonas subvibrioides ATCC 15264] Length = 591 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAA 108 S + E I D S A++ +SSPGGS A E I KPV+ + + AA Sbjct: 324 SDDTAEAIYDAIEDKSVKAIVFRVSSPGGSPEASEQILAAVRAAKAAGKPVVVSMGDYAA 383 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK-SSPMKAEPSPF 167 S GY IS +N IVA ++L GSIGV V L + GV ++ + +P Sbjct: 384 SGGYWISSEANWIVAQPSTLTGSIGVFGGKFVVSEALGRFGVDLRGLSIGGDYADAFAPS 443 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +D +Y FV+ VS R +P + ++ GR+WTGA+ K +GL+D + Sbjct: 444 QSFTTTQRAAFSASMDRTYEEFVQRVSTGRRLPIARVREIARGRVWTGAQGKTLGLVDQL 503 Query: 228 GGQEEVWQSLYALGVDQSIRKI--KDWNPPKNYWFCDLKNLSISSLLEDTI 276 GG E L + + K + P++ W + S + Sbjct: 504 GGLTEAIGKARELANIPADTSVRFKRFPTPQSPWEALSAAFGVQSEAAQAL 554 Score = 82.1 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 86/232 (37%), Gaps = 11/232 (4%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 V+ + D +P A G ++++ + + +D L++ L G S Sbjct: 43 AVLELDLREGLTDQAPTNPFAAFGGSGLSVIQIVDTLAQAEKDSHVKVLLIRLPEAGISP 102 Query: 81 YAGEAIFRAIQKVKNR-KPVITE------VHEMAASAGYLISCASNIIVAAETSLVGSIG 133 + + I +A+++ + KPVI V + +S Y++ +++ + T+ + G Sbjct: 103 ASADEIRQAVRRFRASGKPVIAHSQGFQPVGTVISS--YMVGASASELWMQNTASFQATG 160 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVR 191 ++ D+ GV + + K + ++ + + M + S Y + Sbjct: 161 FSADSIFLGRAFDRYGVRAEFEQRYEYKNAVNEYTQSDYTGPHREAMTAWMTSIYDSAIA 220 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + R + + ++ +A + LID +G EE + Sbjct: 221 NAAFDRKVTAAALKTTIEAGPYSAPQALSLKLIDKIGQVEEAEAEAKRRAGN 272 >gi|269138901|ref|YP_003295602.1| predicted inner membrane peptidase [Edwardsiella tarda EIB202] gi|267984562|gb|ACY84391.1| predicted inner membrane peptidase [Edwardsiella tarda EIB202] gi|304558887|gb|ADM41551.1| Putative protease SohB [Edwardsiella tarda FL6-60] Length = 348 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 8/231 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA----LIVSLSSPGGSAY 81 + + P V + G D+ E+ E IS + +++ L SPGG + Sbjct: 90 ARGGLLAAEKPCVYVLDFTGS-MDAHEVGSLREEISAVLAVAGPQDSVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 149 GYGLAASQLKRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +L K V ++ + K + F E + +D ++ F + V R P Sbjct: 209 FNRWLKKNDVDVELHTAGEFKRTLTLFGENTDAGREKFCQELDETHLLFKQFVQRQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++ G W G +A + GL+D + +++ + +R ++ Sbjct: 267 SLDVDSVATGEHWYGEQALEKGLVDALSTSDDLLIAEMEQADVIGVRYVRR 317 >gi|302842395|ref|XP_002952741.1| signal peptide peptidase [Volvox carteri f. nagariensis] gi|300262085|gb|EFJ46294.1| signal peptide peptidase [Volvox carteri f. nagariensis] Length = 799 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 9/226 (3%) Query: 31 VEDNSPHVARIAIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + +A + G I +I ++ +++D S A+++ + SPGG A + Sbjct: 440 LAGGKKRIAVLRTAGAIVGKSSGAAITPDGVIPKLRALAKDKSVAAVVLRIDSPGGDALS 499 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++R I+++ KPVI + ++AAS GY ++ A+ IVA ++ GSIGV+ + Sbjct: 500 ADLMWREIRQLDAVKPVIASMADVAASGGYYMAMAARAIVAEPLTITGSIGVVTGKFNLS 559 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 K+G + + S N + ++ +Y F + SR + + Sbjct: 560 ELYCKIGYNKVLLSWGRYALLLSDIKGFNEEEEKLFDASAQHAYESFRNKAALSRGMEPE 619 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ-SLYALGVDQSIR 247 ++ GR+W+G AK+V L+D VGG + + +A G+ + R Sbjct: 620 VMEEVAQGRVWSGLAAKEVELVDAVGGIHKAISLARHAAGIPEGER 665 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 79/211 (37%), Gaps = 15/211 (7%) Query: 42 AIRGQIEDSQE-----------LIERIERISRDDSATALIVSLSSPGGSAYA-GEAIFRA 89 + G+I D + + + + D + + + P G +A + I R Sbjct: 185 TLEGEISDQSRGFFDSGLSLPAVCSCLRKAALDPRVQGVAIEI-GPLGIGWAKVQEIKRH 243 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I + + + A Y ++ A + I A T+ + G + +++ LDK+G Sbjct: 244 IDYFRASGKYVVAWMKQGAEKEYYLATACSEIYAPPTAYLSLRGFVTGGTFLRGVLDKVG 303 Query: 150 VSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + K+ +++P+ + + D+ D F+ VS +R + Sbjct: 304 VEPQVRRIGSYKSAGDQLLRQDMSPEQQEQLTDLQDDVIDEFLLQVSTARGKTTKEVKEF 363 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ + K G I + ++E+ L Sbjct: 364 IHEGVYDMQKFKSGGWITDLWYEDELLTELK 394 >gi|258626255|ref|ZP_05721102.1| sohB protein, peptidase U7 family [Vibrio mimicus VM603] gi|258581307|gb|EEW06209.1| sohB protein, peptidase U7 family [Vibrio mimicus VM603] Length = 356 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKREPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + + R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKTLGLVDEIQTSDDLIVEA 311 >gi|188533754|ref|YP_001907551.1| putative periplasmic protease [Erwinia tasmaniensis Et1/99] gi|188028796|emb|CAO96658.1| Peptidase family U7 protein [Erwinia tasmaniensis Et1/99] Length = 349 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 102/210 (48%), Gaps = 10/210 (4%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEA 85 +ED + I +G ++ S+ + + ++ + +++ L SPGG + Sbjct: 96 LEDERSTLYVIDFKGSMDASE--VSSLREEVSAVMAVAEKGDEVLLRLESPGGVVHGYGL 153 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q+++++ + V ++AAS GY+++C ++ IVAA S++GSIGV+ Q P Sbjct: 154 AASQLQRLRDKGITLTVAVDKVAASGGYMMACVADRIVAAPFSIIGSIGVVAQIPNFNRL 213 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 214 LKRNEIDVEMHTAGEYKRTLTLFGENTEQGREKFREDLNETHLLFKQFVHQMR--PALDI 271 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A + GL+D + +++ Sbjct: 272 DSVATGEHWYGTQALEKGLVDAISTSDDLI 301 >gi|258621801|ref|ZP_05716832.1| sohB protein, peptidase U7 family [Vibrio mimicus VM573] gi|258586032|gb|EEW10750.1| sohB protein, peptidase U7 family [Vibrio mimicus VM573] Length = 356 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKREPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + + R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHR--PTLDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKTLGLVDEIQTSDDLIVEA 311 >gi|238798377|ref|ZP_04641859.1| protease sohB [Yersinia mollaretii ATCC 43969] gi|238717762|gb|EEQ09596.1| protease sohB [Yersinia mollaretii ATCC 43969] Length = 348 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + V P + I +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGAVAAIKPCLYVIDFKGSI-DAHEVTSLREEISAVLAVATAQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++++ + V ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHKGIRLTVAVDKVAASGGYMMACVADRIISAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELHTAGEFKRTLTLFGENTEQGREKFREDLNETHLLFKQFVQQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKDKGLVDAIGTSDDLL 300 >gi|168008373|ref|XP_001756881.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691752|gb|EDQ78112.1| predicted protein [Physcomitrella patens subsp. patens] Length = 534 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 3/233 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 R+ + G+ S IERI + A+I+ + S GG A A + ++R I+ + RKP Sbjct: 301 GRLGVSGEGIVSDSFIERIRFVREAKQFKAVIIRIDSGGGDALASDLMWREIKLLAERKP 360 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 VI + ++AAS GY ++ A+ +++A ++ GSIGV+ + +++G + + + Sbjct: 361 VIASMADVAASGGYYMAMAAGVVLAEPLTITGSIGVVTAKFNLATLYERVGFAKEIISRG 420 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + +P+ ++ ++Y F +ESR++P +K ++ GR+WTG A Sbjct: 421 KFAELDADQRPFSPEEENFFKESAMNAYTSFRNKAAESRSMPIEKLEEVAQGRVWTGKAA 480 Query: 219 KKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GL+D +GG + + + DQ + ++ + L S Sbjct: 481 LDRGLVDTLGGISKAVAIAKQKAGIAEDQQVSLVELSRRQASPLSLLLGGASA 533 Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 93/234 (39%), Gaps = 32/234 (13%) Query: 41 IAIRGQIEDSQE-----------LIERIERISRDDSATALIVSLSSPGGSAYAG-----E 84 I + G+I + + + E + + + D +++S+ A + Sbjct: 40 IKLSGEIAEQYQGRFMQGLSLPQICENLIKGAHDPRIEGVVLSIE-----PLACGWGKLD 94 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I R ++ K + + Y ++ A + + A + + +G+ Q ++ Sbjct: 95 EIRRHMEYYKQSGKFLVGYMPVGGEKEYYLASACSELYAPPGAYISLLGLKVQGQFLGGV 154 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+K+GV + + K+ S +++ +M+ ++D Y F+ VS ++ + Sbjct: 155 LEKVGVQPQVQRIGKYKSAGDQLSRKDMSEANREMLTALLDDIYANFLEEVSRAKGKTKE 214 Query: 203 KTLVLSDGRIWTGAEAKK------VGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + L + I+ ++ KK + D + EE+ + +D+ ++ ++ Sbjct: 215 EVEALFESGIYKVSDLKKDRWITDIKYADEI---EEMLKERIKAKMDKPLQTVQ 265 >gi|91228570|ref|ZP_01262490.1| sohB protein, peptidase U7 family protein [Vibrio alginolyticus 12G01] gi|91187894|gb|EAS74206.1| sohB protein, peptidase U7 family protein [Vibrio alginolyticus 12G01] Length = 336 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVASLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK++GL+D + +++ Sbjct: 273 LDLDKVATGEHWFGTQAKELGLVDDISTSDDIV 305 >gi|260773130|ref|ZP_05882046.1| SohB protein peptidase U7 family [Vibrio metschnikovii CIP 69.14] gi|260612269|gb|EEX37472.1| SohB protein peptidase U7 family [Vibrio metschnikovii CIP 69.14] Length = 331 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 105/225 (46%), Gaps = 10/225 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + G I+ + E + I +++ ++V L + GG + Sbjct: 79 SKREPHLFVLDFHGSIDAKEVSSLREEVTAILAVAQPGD--EVLVRLETGGGMVHGYGLA 136 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + P+ V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L Sbjct: 137 SSQLDRLKAAQLPLTIAVDKVAASGGYMMACIADKIVAAPFAIVGSIGVIAQIPNFHKLL 196 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + + + + + K + F E KA + + ++ ++ F + + R P Sbjct: 197 KRNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRDHR--PALDLD 254 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 ++ G W G++AK +GL+D + +++ + ++R ++ Sbjct: 255 KVATGEHWFGSQAKALGLVDEIATSDDLIVNACKEKTVLAVRYVR 299 >gi|160871776|ref|ZP_02061908.1| protease [Rickettsiella grylli] gi|160872532|ref|ZP_02062664.1| protease [Rickettsiella grylli] gi|159120575|gb|EDP45913.1| protease [Rickettsiella grylli] gi|159121331|gb|EDP46669.1| protease [Rickettsiella grylli] Length = 319 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 8/219 (3%) Query: 29 SHVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 H+ + I+G I D + +IE ++ D + +I+ ++SPGGS Sbjct: 60 PTTSKAKAHIGLVDIKGIINDNSAANADNVIEGLQNAFEDKNTRTVILRINSPGGSPVQA 119 Query: 84 EAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 I+ I+ ++++ P + ++ ASA Y I+ AS+ I A +SLVGSIGVL Sbjct: 120 AQIYHEIRYLRHQYPKTKLYAVCDDLCASAAYYIASASDRIYANPSSLVGSIGVLMDGFG 179 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + K+GV + + + K PFS ++ + ++ + + F+ V + R Sbjct: 180 FVETMKKVGVERRLLTAGDHKGFLDPFSPEKLDEKRIAERMLANVHQQFIHAVKQGRGNR 239 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L G WTG EA +GLID G + + L Sbjct: 240 LKNNPELFSGLAWTGEEALPLGLIDGFGDLNSLSRELIK 278 >gi|254507619|ref|ZP_05119752.1| peptidase S49 [Vibrio parahaemolyticus 16] gi|219549506|gb|EED26498.1| peptidase S49 [Vibrio parahaemolyticus 16] Length = 349 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 10/212 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + +G I+ + E + I ++R+ +++ L S GG + Sbjct: 97 SKREPHLFVLDFKGSIDAKEVASLREEVTAILAVAREGD--EVLLRLESGGGMVHGYGLA 154 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 155 SSQLDRIKAANLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKVL 214 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E KA + + ++ ++ F + E R P + Sbjct: 215 KKYDIEYEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHGLFKDFIRERR--PELELD 272 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A +GL+D + +++ Sbjct: 273 KVATGEHWFGTQAHDLGLVDEIKTSDDLVVEA 304 >gi|76800828|ref|YP_325836.1| signal peptide peptidase [Natronomonas pharaonis DSM 2160] gi|76556693|emb|CAI48265.1| probable signal peptide peptidase [Natronomonas pharaonis DSM 2160] Length = 335 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 21/256 (8%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSP--HVARIAIRGQIE---------------DSQELIE 55 V+ +V TV + +P +VA +A+ G I + +++E Sbjct: 44 VVFVIVAATVGLRIGGNIATSLAPGYNVAEVAVEGPITRDGGGGMPLSPPGSPGADDIVE 103 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +IE DD+ AL++ L++PGG+ + I A + P + + AS GY I+ Sbjct: 104 QIEDADADDNVEALLLRLNTPGGAVVPSDDIRLAAEAF--DGPTVAYTTDACASGGYWIA 161 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 + + A S+VGSIGV LD+ GV + + + K PF ++ Sbjct: 162 SGCDELWARRGSVVGSIGVRGSRMTAAELLDRAGVEYEQLTAGEYKEAGVPFDDLGDDER 221 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q +Q +VD Y FV V+E R + ++ +++ G EA + GL+D +G ++EV + Sbjct: 222 QYLQGIVDDYYDQFVETVAEGREMEPSAVRE-TEAKVFLGEEAFERGLVDDLGTKDEVCE 280 Query: 236 SLYA-LGVDQSIRKIK 250 L LG + +++ Sbjct: 281 RLEEVLGTEVETTELE 296 >gi|116250715|ref|YP_766553.1| peptidase [Rhizobium leguminosarum bv. viciae 3841] gi|115255363|emb|CAK06438.1| putative peptidase [Rhizobium leguminosarum bv. viciae 3841] Length = 286 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 21/272 (7%) Query: 37 HVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + + ++G I + +E+ A A+ +S++SPGGS I Sbjct: 19 TIPVVRLQGAIISGGGQFRPTLNLANVSPVLEKAFAMKDAPAVAISINSPGGSPVQSRLI 78 Query: 87 FRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F I+++ +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 79 FTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIADATSIVGSIGVVSGGFGFPEL 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV + + K PF K ++ ++ + + F+ +V E R Sbjct: 139 LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHQVFISMVRERRAGKLRDD 198 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G W+G ++GLID +G + + Y K++ + + + Sbjct: 199 AAVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG-----QTTKLELVTAGRGLFGRRIP 253 Query: 265 NLSISSL----LEDTIPLMKQTKVQGLWAVWN 292 +S SL L++ + + LW+ + Sbjct: 254 GVSPVSLEGAASGLATGLVEAAEERALWSRFG 285 >gi|158312662|ref|YP_001505170.1| signal peptide peptidase SppA, 36K type [Frankia sp. EAN1pec] gi|158108067|gb|ABW10264.1| signal peptide peptidase SppA, 36K type [Frankia sp. EAN1pec] Length = 651 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 1/227 (0%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 A + G + + + +RD S A + + SPGGS A + + R I++ ++ Sbjct: 363 ATMPFSGPVLAADAVTAAFRAAARDPSVAAAVFRVESPGGSYVASDVVRREIERFRSTGR 422 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV+ + +AAS GY ++ A ++IVA +L GSIGV V+ DK+G+ +V + Sbjct: 423 PVVVSMGSVAASGGYFVALAGDVIVANPGTLTGSIGVFGGKQVVRDLFDKVGIGFGAVAA 482 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP + + +D Y FV V+++R + + L+ GR+WTGA+ Sbjct: 483 GENALMMSPRQPFTQAGRAKLDEFLDRVYADFVDKVAQARRMSHGDAHELARGRVWTGAD 542 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 A + GL+D +GG +A + + PK+ F L+ Sbjct: 543 AHRHGLVDELGGLAHAIDLAWARAGLPAGETPRVRLTPKSSVFDRLR 589 Score = 85.6 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 8/179 (4%) Query: 78 GSAYA-GEAIFRAIQKVKNRKPVITEVHEM-----AASAGYLISCASNIIVAAETSLVGS 131 G A + I A+ + + + + Y ++CA + I A +G Sbjct: 80 GMPLARVQEIRDAVAEFRASGGAAYAYADTFGEFGGGTVAYYLACAFDEIWLAPPGDLGL 139 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWF 189 GV + P+V+ LD+LGV+++ + K + + P + + +VDSS Sbjct: 140 TGVAMETPFVRDALDRLGVTVEIGQRHEYKNAVNTLVERDFTPAHREALARIVDSSAEQI 199 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 V +++SR + D+ + D G A GL+D +G ++E+++ + R Sbjct: 200 VAGIAQSRGLSADQVRRMIDIAPLAGHVALSAGLVDRIGYRDEIYEYARERARALAGRD 258 >gi|315445955|ref|YP_004078834.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. Spyr1] gi|315264258|gb|ADU01000.1| signal peptide peptidase SppA, 67K type [Mycobacterium sp. Spyr1] Length = 595 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 16/236 (6%) Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + SPGGS A E I+R + + + PV+ + +AAS GY +S A++ IVA ++ G Sbjct: 354 RVDSPGGSVTASETIWREVVRARESGTPVVASMGSVAASGGYYVSMAADAIVANPATITG 413 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + ++LGV SV+++ S + + + D Y FV Sbjct: 414 SIGVVTGKLVARDLKERLGVGSDSVRTNANADAWSINAPFTEEQHAQVAAEADLFYDDFV 473 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD------- 243 V+E R + D ++ GR+WTGA+A GL+D +GG AL Sbjct: 474 ARVAEGRGLSIDAVEQVARGRVWTGADALDRGLVDELGGLRTAVTRAKALAGIDEDTKVE 533 Query: 244 ------QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK--VQGLWAVW 291 S+R + P L L + ++ ++ QT+ + G+ A+W Sbjct: 534 LQMLPGASLRDVLRPKPSSQPAAASLPELLGALAIQSVAGVVDQTQRSLSGVNALW 589 Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 10/204 (4%) Query: 51 QELIERIERISRDDSATALI--VSLSS--PGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +E + + R + D LI V + + PG A + + AI +KP + Sbjct: 65 REAVSALHRAAEDPRVAGLIARVQIDAAAPG----AVQELREAIVAFTAKKPSLAWAETY 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + Y ++ A + + +G +G +++ LDKLGV + + K+ P+ Sbjct: 121 PGTLSYYLASAFGEVWMQPSGTLGLVGFATNALFLRDALDKLGVEAQFIAKGEYKSAPNL 180 Query: 167 FSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 F+E + +V+ V+ SR I L+D +A GLI Sbjct: 181 FTEDRYTEPHREADTALVNGLRTQVWDAVAASRGIDVATLDALADRAPLLRDDAVTAGLI 240 Query: 225 DVVGGQEEVWQSLYALGVDQSIRK 248 D VG ++E + + + + Sbjct: 241 DRVGFRDEAYARIADMAGADGVSP 264 >gi|254471707|ref|ZP_05085108.1| serine protease [Pseudovibrio sp. JE062] gi|211958909|gb|EEA94108.1| serine protease [Pseudovibrio sp. JE062] Length = 286 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 9/244 (3%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAAS 109 + + +E A A+ +S++SPGGS IF+ I+++ + K V+ V ++AAS Sbjct: 43 SVEDALETAFSFKEAPAVALSINSPGGSPVQSHLIFKRIRQLADENNKQVLVFVEDVAAS 102 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+I+ A + I+ S++GSIGV+ L+K GV + S K PF+ Sbjct: 103 GGYMIALAGDDIIVDPASIIGSIGVVSAGFGFTELLEKAGVQRRVYTSGEKKVTLDPFAP 162 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ ++ + + F+ +V R L G WTGA+A+ +GL+D +G Sbjct: 163 EVKEDIEHLKTLQHEIHEMFIDMVKSRRGDVLSDDDNLFSGLFWTGAKARDLGLVDGLGD 222 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL-- 287 Y K+K K + + S+ L + + + L Sbjct: 223 LHSTIHERYG-----KETKVKVVGTKKRFLGRFIPGASLKGGLNEAAGTLPAAALATLEE 277 Query: 288 WAVW 291 ++W Sbjct: 278 KSLW 281 >gi|190890590|ref|YP_001977132.1| peptidase [Rhizobium etli CIAT 652] gi|190695869|gb|ACE89954.1| peptidase protein [Rhizobium etli CIAT 652] gi|327192814|gb|EGE59741.1| peptidase protein [Rhizobium etli CNPAF512] Length = 286 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 21/276 (7%) Query: 33 DNSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + ++G I + +E+ A A+ ++++SPGGS Sbjct: 15 KDGVTIPVVRLQGAIISGGGQFRPTLNLANVAPVLEKAFAMKDAPAVAIAINSPGGSPVQ 74 Query: 83 GEAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 IF I+++ +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 75 SRLIFTRIRELAREKKKKVLIFVEDVAASGGYMIALAGDEIIADATSIVGSIGVVSGGFG 134 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K+GV + + K PF K ++ ++ + + F+ +V E R Sbjct: 135 FPELLKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHQVFIAMVRERRAGK 194 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + G W+G ++GLID +G + + Y K++ + Sbjct: 195 LKDDATVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG-----QKTKLELVTASRGLLG 249 Query: 261 CDLKNLSISSL----LEDTIPLMKQTKVQGLWAVWN 292 + +S SL L++ + + LW+ + Sbjct: 250 RRIPGVSPVSLEGAGSSLATGLVEAAEERALWSRFG 285 >gi|284007501|emb|CBA72986.1| probable protease [Arsenophonus nasoniae] Length = 348 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 106/244 (43%), Gaps = 14/244 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 P + I +G + + E I I I+ + +++ L SPGG + Sbjct: 93 GQTTLKKPCLFVIDFKGSMNALEVNALREEITAILSIADNKD--EVLLRLESPGGVVHGY 150 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ + +I V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 151 GLAASQLNRLREKGLKLIVSVDKVAASGGYMMACVADHIVAAPFAIIGSIGVVAQVPNFH 210 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + ++ + K + E + + ++ ++ F V + R P Sbjct: 211 RLLKKKDIDVELHTAGEYKRTLTLLGENTEQGRKKFVQDLNEAHQLFKDFVHQKR--PAL 268 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G +AK+ GLID +G +++ + ++ + P K + Sbjct: 269 DINAVATGEHWYGVQAKEKGLIDEIGVSDDIIINQIEAREIIAVT----YTPAKRFVDRL 324 Query: 263 LKNL 266 + ++ Sbjct: 325 MGSM 328 >gi|158422526|ref|YP_001523818.1| periplasmic serine protease [Azorhizobium caulinodans ORS 571] gi|158329415|dbj|BAF86900.1| periplasmic serine protease [Azorhizobium caulinodans ORS 571] Length = 296 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 13/268 (4%) Query: 38 VARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + + G I ++R A A+ + ++SPGGS IF+ Sbjct: 28 VPVVRLSGAIGMNSPFRQSLTLAATARLLDRAFAVKRAPAVALVINSPGGSPVQSNLIFK 87 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+ + K V V ++AAS GY+++CA++ I A +S+VGSIGV+ L Sbjct: 88 RIRALAEEKNKRVFAFVEDVAASGGYMLACAADEIYADPSSIVGSIGVVSAGFGFNDMLS 147 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTL 205 ++GV + + K PF + V + + + F LV R + + Sbjct: 148 RIGVERRVHTAGTRKVMLDPFQPERAEDVDRLLAIQREVHASFRDLVRSRRGALLKGEED 207 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS-IRKIKDWNPPKNYWFCDLK 264 L G W GA+A +GLID +G V + + V I +W + Sbjct: 208 DLFSGEFWVGAQALPMGLIDGLGDLRSVLRERFGTDVRTPLIAPSGNWFTRRANGIGAQI 267 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 L L + + LWA + Sbjct: 268 GLDGGIGAGFAQGLADVAEERALWARYG 295 >gi|238754974|ref|ZP_04616323.1| protease sohB [Yersinia ruckeri ATCC 29473] gi|238706833|gb|EEP99201.1| protease sohB [Yersinia ruckeri ATCC 29473] Length = 348 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + + + P + + +G I D+ E+ E IS + +++ L SPGG + Sbjct: 90 AKAGAIAAVKPCLYVLDFKGSI-DAHEVTSLREEISAVLAVATPQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 ++++++ + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRHAGVRLTVAVDKVAASGGYMMACVADRIVSAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + ++ ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDLELHTAGEFKRTLTLFGENTEQGREKFREDLNETHKLFKQFVKQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK+ GL+D +G +++ Sbjct: 267 SLDIDAVATGEHWFGTQAKEKGLVDAIGTSDDLL 300 >gi|254284422|ref|ZP_04959390.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR51-B] gi|219680625|gb|EED36974.1| signal peptide peptidase SppA, 67K type [gamma proteobacterium NOR51-B] Length = 590 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 10/214 (4%) Query: 38 VARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA + I G++ S+ ++ER+ R + A+++ +++PGGS +A + I Sbjct: 304 VAVVPIEGELVPGESIDGFAGSETVLERLRRTAELPGLEAVVLRINTPGGSVFAADVIRE 363 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ + V+ + +A S GY I+ ++ IVA T+L GSIGV +P + D Sbjct: 364 GVQELRAQGLTVVVSMAALATSGGYYIAAETDHIVAQPTTLTGSIGVFAAFPTFERLFDY 423 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 GVS+ V ++ M ++ + +++ V+ +Y F+ +V+E R + ++ + Sbjct: 424 AGVSVDGVGTTAMADAFRADRPLSEGSASVIRQVIAGTYVDFLHIVAEGRGMNVEQVAPI 483 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++G +WTG++A ++GL+D +GG EE L Sbjct: 484 AEGIVWTGSDALEIGLVDSMGGLEEAINIAAGLA 517 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 26/213 (12%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +L++ I+ S D +A+++ L + G + AI + K R KPVI V + Sbjct: 66 DLVDAIDAASEDPRISAMVIDLADTVGPGLSQTLDLITAIDRFKARGKPVIA-VGDFYTQ 124 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 YL++ ++ ++ GS+ G Y+ LDK+ +++ ++ K+ P Sbjct: 125 GHYLVASQADEVLLHPK---GSLSLTGFGAYNYYLVRLLDKIKLTVHVFRAGDNKSAVEP 181 Query: 167 F--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSD---------GRIWT 214 F +++ +++ + S + + ++ R +P ++D G + Sbjct: 182 FLRDDMSSTERRVVARWLGSLWQDYTAVIERGRGLPSGSIDRMIADFPALLGQYGGDV-- 239 Query: 215 GAEAKKVGLIDVVGG---QEEVWQSLYALGVDQ 244 + +GLID + E + G D+ Sbjct: 240 AQMSLALGLIDGLANDAAMEARIAEVAGAGRDE 272 >gi|262372062|ref|ZP_06065341.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] gi|262312087|gb|EEY93172.1| signal peptide peptidase SppA, 36K type [Acinetobacter junii SH205] Length = 320 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 17/264 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEA 85 + N + + +G ++ S + E I I +A A ++V L SPGG + Sbjct: 53 KKNDQKIYVLDFKGDVQASAVDTIREEITLILA--TAKAGHDRVVVRLESPGGMVHGYGL 110 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++++ V V ++AAS GY+++C +N I+ A ++VGSIGV+ Q P Sbjct: 111 AAAQLVRLRDAGFNVTICVDKVAASGGYMMACIANEIITAPFAVVGSIGVVAQVPNFNRL 170 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 171 LKQHNVDFELYTAGEYKRTVTMFGENTPEGKAKFEEELQQTHSLFKHFVEKYR--PQLDI 228 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G W G +A + L+D + +E SL + N K F + Sbjct: 229 SKVATGEHWYGEDALALNLVDKLQTSDEYLLSLL------PKHDVYVINTRKRPTFGEKL 282 Query: 265 NLSISSLLEDTIPLMKQTKVQGLW 288 L + + E IP + L Sbjct: 283 GLQAAQMAESLIPAVLGKMTDTLV 306 >gi|262278270|ref|ZP_06056055.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] gi|262258621|gb|EEY77354.1| periplasmic serine protease [Acinetobacter calcoaceticus RUH2202] Length = 320 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + + E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENIREEITLILA--TAKAGRDRVVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I+ A ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIITAPFAIVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L A + N + + Sbjct: 230 KVATGEHWYGEDALNLNLVDKLQTSDEYLLALLA------QHDVYVINTRRKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + ++ L Sbjct: 284 LQAAQMADSLIPAVMNKVMENL 305 >gi|152969822|ref|YP_001334931.1| putative periplasmic protease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330002600|ref|ZP_08304369.1| putative signal peptide peptidase SppA [Klebsiella sp. MS 92-3] gi|150954671|gb|ABR76701.1| putative peptidase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328537251|gb|EGF63511.1| putative signal peptide peptidase SppA [Klebsiella sp. MS 92-3] Length = 360 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSA 80 + + P + +G ++ + E+ + D +++ L SPGG Sbjct: 103 LGNAEPEGKPRAWVLDFKGSMDAHEVNSLREEITAVLAAAKARDQ---VVIRLESPGGVV 159 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q++++++ P+ V ++AAS GY+++C +N IV+A +++GSIGV+ Q P Sbjct: 160 HGYGLAASQLQRLRDKQIPLTVSVDKVAASGGYMMACVANKIVSAPFAILGSIGVVAQIP 219 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + FL + I+ + K + E + + ++ ++ ++H F V R Sbjct: 220 NLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHHLFKDFVHRMR-- 277 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D V +E+ L Sbjct: 278 PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGLME 317 >gi|284164633|ref|YP_003402912.1| signal peptide peptidase SppA, 36K type [Haloterrigena turkmenica DSM 5511] gi|284014288|gb|ADB60239.1| signal peptide peptidase SppA, 36K type [Haloterrigena turkmenica DSM 5511] Length = 331 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 19/234 (8%) Query: 38 VARIAIRGQIED---------------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VA +A+ G I + +++++I+R DDS AL+V L++PGG Sbjct: 68 VAEVAVEGPITRDGGGGSLPSSPRGTPADDIVDQIDRADEDDSVDALLVKLNTPGGEVVP 127 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + I A ++ P I ++ AS GY I+ + + A E S+VGSIGV+ Sbjct: 128 SDDIRLAAERF--DGPTIAYATDVCASGGYWIASGCDELWAREGSIVGSIGVIGSRVNAS 185 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +K+G+S + + K +P E++ +Q ++D Y FV VS+ R++ + Sbjct: 186 DLAEKVGLSYERFAAGDYKDAGTPLKEMDEDERAYLQGLIDDYYDTFVERVSDGRDLDSE 245 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ RI+ G +A+++ L+D +G + E+ L +++ ++++ P + Sbjct: 246 FVRD-TEARIYLGEQARELELVDRLGTRREIEDELADR-LERDEISVEEFEPER 297 >gi|269966535|ref|ZP_06180618.1| sohB protein, peptidase U7 family [Vibrio alginolyticus 40B] gi|269828879|gb|EEZ83130.1| sohB protein, peptidase U7 family [Vibrio alginolyticus 40B] Length = 353 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVASLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK++GL+D + +++ Sbjct: 273 LDLDKVATGEHWFGTQAKELGLVDDISTSDDIV 305 >gi|218709038|ref|YP_002416659.1| putative periplasmic protease [Vibrio splendidus LGP32] gi|218322057|emb|CAV18116.1| sohB protein, peptidase U7 family [Vibrio splendidus LGP32] Length = 355 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E ++ + +++ L S GG + Sbjct: 103 SKREPHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLAS 161 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 162 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLK 221 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E + KA + ++ ++ ++ F + + R P Sbjct: 222 KHDIEFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLEK 279 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A ++GL+D + +++ Sbjct: 280 VATGEHWFGTQAHELGLVDEISTSDDLV 307 >gi|262393791|ref|YP_003285645.1| SohB protein peptidase U7 family [Vibrio sp. Ex25] gi|262337385|gb|ACY51180.1| SohB protein peptidase U7 family [Vibrio sp. Ex25] Length = 353 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVASLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK++GL+D + +++ Sbjct: 273 LDLDKVATGEHWFGTQAKELGLVDDISTSDDIV 305 >gi|227821040|ref|YP_002825010.1| putative peptidase [Sinorhizobium fredii NGR234] gi|227340039|gb|ACP24257.1| putative peptidase [Sinorhizobium fredii NGR234] Length = 288 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 17/244 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I + G I + +E+ A A+ +S++SPGGS I+ Sbjct: 20 IPTIRLHGTIMSGGGQFRPVLNLATVAPLLEKAFSVKEAPAVAISVNSPGGSPVQSRLIY 79 Query: 88 RAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I+ + + K V+ V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 80 QRIRDLADEKKKRVLIFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSGGFGFPELL 139 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + V+ ++ + + F++LV R Sbjct: 140 KKVGVERRVYTAGENKVVLDPFQPEKERDVEFLKSLQLDIHDTFIQLVKARRGSMLADHP 199 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + G WTG +++GL+D +G + Y +++ P ++ + Sbjct: 200 DIFSGLFWTGRRGQELGLVDALGDMRGEVKRRYG-----EKARLELIQPSRSLFGRRQPG 254 Query: 266 LSIS 269 ++ Sbjct: 255 AAVG 258 >gi|86148848|ref|ZP_01067109.1| sohB protein, peptidase U7 family protein [Vibrio sp. MED222] gi|85833365|gb|EAQ51562.1| sohB protein, peptidase U7 family protein [Vibrio sp. MED222] Length = 353 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E ++ + +++ L S GG + Sbjct: 101 SKREPHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E + KA + ++ ++ ++ F + + R P Sbjct: 220 KHDIEFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLEK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A ++GL+D + +++ Sbjct: 278 VATGEHWFGTQAHELGLVDEISTSDDLV 305 >gi|262171927|ref|ZP_06039605.1| SohB protein peptidase U7 family [Vibrio mimicus MB-451] gi|261893003|gb|EEY38989.1| SohB protein peptidase U7 family [Vibrio mimicus MB-451] Length = 353 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 101 SKREPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F + + R P Sbjct: 220 KNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKLELEETHQLFKDFIRDHR--PALDLDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +AK +GL+D + +++ Sbjct: 278 VATGEHWFGTQAKTLGLVDEIQTSDDLIVEA 308 >gi|86356525|ref|YP_468417.1| protease protein [Rhizobium etli CFN 42] gi|86280627|gb|ABC89690.1| protease protein [Rhizobium etli CFN 42] Length = 286 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 21/272 (7%) Query: 37 HVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + + ++G I + +E+ A A+ +S++SPGGS I Sbjct: 19 TIPVVRLQGAIISGGGQFRPTLNLANVAPVLEKAFAMKEAPAVAISINSPGGSPVQSRLI 78 Query: 87 FRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 F I+++ +K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 79 FTRIRELAREKQKKVLVFVEDVAASGGYMIALAGDEIIADATSIVGSIGVVSGGFGFPEL 138 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K+GV + + K PF K ++ ++ + + F+ +V E R Sbjct: 139 LKKIGVERRVYTAGENKVILDPFQPEKEKDIEYLKSLQLEIHQVFIAMVRERRAGKLTDD 198 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 + G W+G ++GLID +G + + Y +++ + + + Sbjct: 199 ATVFSGLFWSGTRGLELGLIDGLGDMRQELKRRYG-----QKTRLELVTAGRGLFGRRIP 253 Query: 265 NLSISSL----LEDTIPLMKQTKVQGLWAVWN 292 +S +L L++ + + LW+ + Sbjct: 254 GISPVTLEGAGSGLATGLVEAAEERALWSRFG 285 >gi|15964602|ref|NP_384955.1| putative protease protein [Sinorhizobium meliloti 1021] gi|307309348|ref|ZP_07589011.1| peptidase S49 [Sinorhizobium meliloti BL225C] gi|307320084|ref|ZP_07599505.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|15073780|emb|CAC45421.1| Probable proteinase [Sinorhizobium meliloti 1021] gi|306894299|gb|EFN25064.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306900217|gb|EFN30835.1| peptidase S49 [Sinorhizobium meliloti BL225C] Length = 288 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 23/277 (8%) Query: 34 NSPHVARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + + I + G I + +E+ A A+ +S++SPGGS Sbjct: 16 DGVTIPAIRLHGAIMAGGSPLRPVLNLATVAPLLEKAFSVKEAPAVAISINSPGGSPVQS 75 Query: 84 EAIFRAIQKVKNRKP--VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I++ I+ + K V+ V ++AAS GY+I+ A + I+A TS+VGSIGV+ Sbjct: 76 RLIYQRIRDLAQEKRKRVLIFVEDVAASGGYMIALAGDEIIADPTSIVGSIGVVSGGFGF 135 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K+GV + + K PF + ++ ++ + + F+++V R Sbjct: 136 PDLLKKIGVERRVYTAGENKVVLDPFQPEKERDIEFLKGLQLEIHDIFIQMVKSRRGSLL 195 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 L G WTG +++GL+D +G + Y +++ P ++ + Sbjct: 196 ADHPDLFSGLFWTGQRGQELGLVDALGDIRGEVKKRYG-----EKARLELIQPARSLFGR 250 Query: 262 DLKNLSISSLL------EDTIPLMKQTKVQGLWAVWN 292 +++ + L++ + + LWA + Sbjct: 251 RQPGAAVAGAITGPLVASAAAGLVEAVEERALWARFG 287 >gi|254509786|ref|ZP_05121853.1| peptidase, family S49 [Rhodobacteraceae bacterium KLH11] gi|221533497|gb|EEE36485.1| peptidase, family S49 [Rhodobacteraceae bacterium KLH11] Length = 265 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 14/236 (5%) Query: 33 DNSPHVARIAIRGQI-------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P VA + + G I ++ L +ER R A+ + ++SPGGS Sbjct: 9 KKQPLVAVVRLSGAIGMAGRGSMNANALAPVLERAFRKGKPAAVALEVNSPGGSPVQSSL 68 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ + PV V ++AAS GY ++ +++ I A ++S++GSIGV+ Sbjct: 69 IGARIRRLADELDIPVYAFVEDVAASGGYWLAASADEIWADDSSVLGSIGVISSGFGAHV 128 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + GV + + K+ PF+ + V ++ ++ + F+ V R+ D Sbjct: 129 FLARQGVERRVHTAGQSKSMLDPFAPEKKEDVARLKVLLGDIHENFIDHVKSRRDGKLDP 188 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 L +G +W A+++GLID + + Q + V + + + K W Sbjct: 189 EADLFNGEVWLARRAQELGLIDGIAHLKPKMQERFGDKV-----RFRRYGLRKPIW 239 >gi|148980525|ref|ZP_01816098.1| predicted inner membrane peptidase [Vibrionales bacterium SWAT-3] gi|145961178|gb|EDK26493.1| predicted inner membrane peptidase [Vibrionales bacterium SWAT-3] Length = 353 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E ++ + +++ L S GG + Sbjct: 101 SKREPHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E + KA + ++ ++ ++ F + + R P Sbjct: 220 KHDIEFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GL+D + +++ Sbjct: 278 VATGEHWFGTQAHELGLVDEIRTSDDLVVEA 308 >gi|298370239|ref|ZP_06981555.1| signal peptide peptidase SppA, 36K type [Neisseria sp. oral taxon 014 str. F0314] gi|298281699|gb|EFI23188.1| signal peptide peptidase SppA, 36K type [Neisseria sp. oral taxon 014 str. F0314] Length = 328 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 31/294 (10%) Query: 13 VMLSLVTLTVVYFSWSS---HVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRD 63 V+L L+ +T + + V + H A I +RG I DS+ L E +E ++ Sbjct: 51 VVLFLILITDIGNNSEGGKKIVSASGAHTAVINLRGAIGDSEFDDQVKALRESMEAAYKN 110 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNI 120 +A A+I+ +SPGGS F I+++K PV EM AS Y I+ A++ Sbjct: 111 KNAKAIIIRANSPGGSPVISNIAFNEIRRLKEAHKNIPVYVVAEEMCASGCYYIAAAADK 170 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I A +S+VGSIGV+ +DK+GV + + K PFS P+ ++ Sbjct: 171 IYADPSSVVGSIGVIGGGFDATGLMDKIGVKRRLKTAGSNKGMGDPFSPETPEQTKIWNA 230 Query: 181 VVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ + F++ V R + + + GRI+TG EAK+ GLID G V + + Sbjct: 231 MLADIHGEFIKAVKLGRGSRLKEKENPDIFSGRIYTGIEAKQAGLIDDFGNIYSVARDVV 290 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA-VW 291 ++ +++P ++ S LL + + + +++ + +W Sbjct: 291 ------KAPELVNYSPDDDF----------SKLLSRRLGMEMKMRLKEAMSKLW 328 >gi|84393898|ref|ZP_00992641.1| sohB protein, peptidase U7 family [Vibrio splendidus 12B01] gi|84375495|gb|EAP92399.1| sohB protein, peptidase U7 family [Vibrio splendidus 12B01] Length = 349 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E ++ + +++ L S GG + Sbjct: 97 SKREPHLFVLDFNGSI-DAKEVASLREEVTAVLAVAREGDEVLLKLESGGGMVHGYGLAS 155 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 156 SQLDRIKAAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVIAQLPNFNKLLK 215 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E + KA + ++ ++ ++ F + + R P Sbjct: 216 KHDIEFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHGLFKDFIRDHR--PALDLEK 273 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A ++GL+D + +++ Sbjct: 274 VATGEHWFGTQAHELGLVDEISTSDDLV 301 >gi|52548349|gb|AAU82198.1| protease IV [uncultured archaeon GZfos11H11] Length = 251 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 13/230 (5%) Query: 38 VARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +A I I+G I + +I+ IE + +I ++SPGG+ +A + I Sbjct: 12 IAIIPIKGMITSEESVFGLMAASTLIIKDIEEVENKRKIKTVIFEINSPGGTPFASKEIA 71 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+ + KP I V E AS Y I+ A + IVA E S VGSIG + P + + K Sbjct: 72 TCIENM--DKPAIAWVREYGASGAYWIASACDEIVADELSTVGSIGAMSIRPDIGELMKK 129 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ ++++++ K P+ + + ++M+ +D F+ V+++R + K L Sbjct: 130 FGIDVETLRTGIYKGMGLPYEKPTEEERELMKKELDEIQDNFLNAVAKNRKLDDAKMKEL 189 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 S +++ G EAK++GLID +GG+E + + KI D+ K Sbjct: 190 STAKVYLGREAKEMGLIDHLGGKELAIRIAKERSGIRK-EKIVDYGERKR 238 >gi|238919608|ref|YP_002933123.1| periplasmic protease [Edwardsiella ictaluri 93-146] gi|238869177|gb|ACR68888.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 348 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 8/231 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATA----LIVSLSSPGGSAY 81 + + P V + G D++E+ E IS + +++ L SPGG + Sbjct: 90 ARGGLLAAEKPCVYVLDFTGS-MDAREVGSLREEISAVLAVAGPQDSVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 149 GYGLAASQLKRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +L K V ++ + K + F E + +D ++ F + V R P Sbjct: 209 FNRWLKKNDVDVELHTAGEFKRTLTLFGENTDVGREKFCQELDETHLLFKQFVQRQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++ G W G +A + GL+D + +++ + +R ++ Sbjct: 267 SLDVDSVATGEHWYGEQALEKGLVDALSTSDDLLIAEMEQADVIGVRYVRR 317 >gi|118581390|ref|YP_902640.1| signal peptide peptidase SppA, 36K type [Pelobacter propionicus DSM 2379] gi|118504100|gb|ABL00583.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Pelobacter propionicus DSM 2379] Length = 320 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 20/281 (7%) Query: 32 EDNSPHVARIAIRGQIEDSQE---------------LIERIERISRDDSATALIVSLSSP 76 + + + + I G I + ++ + E +++ +DD +I+ + SP Sbjct: 41 GEGAKKILLLDISGTISEKEKPGGLVGADRPSTVSLIREALQKAEKDDRIAGVILRIDSP 100 Query: 77 GGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 GGS A + I I + K R+ PV + + AS GY + A++ I+A T++ GSIGV Sbjct: 101 GGSVTASDIIHHDITEFKKRRRIPVHACIMGVGASGGYYAAAAADRIIAHPTAITGSIGV 160 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + L KLG+ ++VKS K S F P+ ++ Q++++ + F+ +V Sbjct: 161 ILMKFNLAGLLGKLGIEEQAVKSGDKKDFFSLFRRATPEEEKLAQEIINQLHSRFLDVVM 220 Query: 195 ESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 + + D+ L+DGRI+T +A + L+D G ++V ++ D+ R + + Sbjct: 221 QRPGNRLSRDELARLADGRIYTAGQALQARLVDGTGYLDDVISAMRKQIKDEQARVVSYY 280 Query: 253 NPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 P +Y S L + + +W P Sbjct: 281 RPG-SYLGSIYDGREAKSSLVGMLGATSEFSGGSFMYLWQP 320 >gi|255067016|ref|ZP_05318871.1| signal peptide peptidase SppA, 36K type [Neisseria sicca ATCC 29256] gi|255048841|gb|EET44305.1| signal peptide peptidase SppA, 36K type [Neisseria sicca ATCC 29256] Length = 329 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 70/274 (25%), Positives = 133/274 (48%), Gaps = 18/274 (6%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSAT 67 V+L L+ + ++ + V+ + H A I ++G+I + + L +E + + +A Sbjct: 56 VILFLMFIASLFGDDTDAVQSSGEHTAVIDLKGEIGNELDDQVEMLRTGMEAVYNNPNAK 115 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ +SPGGS F I+++K+ PV +M AS Y I+ A++ I A Sbjct: 116 AIIIRANSPGGSPVVSNIAFNEIRRMKSEHKDIPVYVVAEDMCASGCYYIAAAADKIYAD 175 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 +S+VGSIGV+ +DK+G+ + + K PFS P Q+ + ++ Sbjct: 176 PSSVVGSIGVIGGGFDATGLMDKIGIKRRLKIAGSNKGMGDPFSPETPAQTQIWEKMLTD 235 Query: 185 SYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + F++ V R + + + GRI+TG+EAK+VGLID G V + + Sbjct: 236 IHKEFIKSVKLGRGKRLKDQQYSDVFSGRIYTGSEAKEVGLIDDFGSVYSVARDVV---- 291 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 + ++ ++ P ++ F + +S+ +E + Sbjct: 292 --KVPELVNYTPEED--FGKILGRHLSAEMETKV 321 >gi|229515443|ref|ZP_04404902.1| SohB protein peptidase U7 family [Vibrio cholerae TMA 21] gi|229347212|gb|EEO12172.1| SohB protein peptidase U7 family [Vibrio cholerae TMA 21] Length = 356 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 8/211 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 104 SKRDPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 162 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 163 SQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 222 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + ++ ++ F + + R P Sbjct: 223 KNDIEFEQLTAGEYKRTLTMFGENTDKARDKFKLELEETHQLFKDFIRDHR--PALDLDK 280 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +AK +GL+D + +++ Sbjct: 281 VATGEHWFGTQAKALGLVDEIQTSDDLIVEA 311 >gi|323526878|ref|YP_004229031.1| peptidase S49 [Burkholderia sp. CCGE1001] gi|323383880|gb|ADX55971.1| peptidase S49 [Burkholderia sp. CCGE1001] Length = 321 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 8/224 (3%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGG 78 + + + H A IA+ G+I +++++ +E D +I+ +SPGG Sbjct: 56 FDFSGDKIAASGRHTALIALDGEISADTRANAEDISAALESAFEDAGTAGVILRCNSPGG 115 Query: 79 SAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 S I+ +++++ + P + V +M AS GY + A + I + S+VGSIGVL Sbjct: 116 SPVQAGIIYEEMRRLRAKHPSIPLYVVVGDMCASGGYYAAAAGDKIYVDKASIVGSIGVL 175 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 +DKLG+ + S K PFS PK Q Q+++D + F+ V + Sbjct: 176 MDSFGFTGLMDKLGIQRRLHTSGENKGFYDPFSPETPKMDQHAQEMLDQIHGQFIDAVRQ 235 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R +T + G WTG ++ ++GL D G V + + Sbjct: 236 GRGKRLHETADMFSGLFWTGQKSVELGLADGFGDANYVAREIIK 279 >gi|229220652|ref|YP_050383.2| putative periplasmic protease [Pectobacterium atrosepticum SCRI1043] Length = 348 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 6/204 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQ 91 P + + G ++ + L E I + +++ L SPGG + +Q Sbjct: 99 KPCLYVLDFNGSMDAGEVSSLREEISAVLAVAKPKDEVLLRLESPGGVVHGYGLAASQLQ 158 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L + Sbjct: 159 RLRQGGVRLTVAVDKVAASGGYMMACVADHIVAAPFAIVGSIGVVAQIPNFHRLLKNKDI 218 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + ++ ++ ++ F V + R P ++ G Sbjct: 219 DVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHTLFKDFVQQMR--PSLDIDSVATG 276 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK + LID +G +++ Sbjct: 277 EHWFGTQAKDLKLIDAIGTSDDLL 300 >gi|297618683|ref|YP_003706788.1| signal peptide peptidase SppA, 36K type [Methanococcus voltae A3] gi|297377660|gb|ADI35815.1| signal peptide peptidase SppA, 36K type [Methanococcus voltae A3] Length = 367 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 125/247 (50%), Gaps = 14/247 (5%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE--------------DSQE 52 + V+++++ + + F ++ S ++A I G + D + Sbjct: 58 YLFIVVVIIAVLLSSSLLFINLLIDDEESGNIALIDFSGTLYLSTPEDDLFSEYPPDVYD 117 Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 I+ ++ ++ +I+ ++SPGGS+ A + I++V +KPV+ + M ASA Y Sbjct: 118 YIDWLDEAEKNPDIKGVIIKINSPGGSSIASTKLAEKIEEVSQKKPVVAYIEAMGASAAY 177 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 + ++ IVA + +LVGSIGV + +DK+GV+ +K K SP+ + Sbjct: 178 GAAASTGYIVAEKEALVGSIGVRMDILHYYGLMDKIGVNSTVIKGGEYKDIGSPYRPMTE 237 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +M+Q +V++SY FV ++ RN+ Y++ L+ G+++ G +A ++GL+D G ++ Sbjct: 238 EEQEMLQKIVNNSYVDFVSQIARDRNMTYEEANELAQGKVYDGRDALQLGLVDENGDFDQ 297 Query: 233 VWQSLYA 239 L Sbjct: 298 AINVLAK 304 >gi|237750827|ref|ZP_04581307.1| signal peptide protease IV [Helicobacter bilis ATCC 43879] gi|229373272|gb|EEO23663.1| signal peptide protease IV [Helicobacter bilis ATCC 43879] Length = 294 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 3/250 (1%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDSQELIERIERISR 62 + I T + ++ L+ + + + +S E ++ P++A++ + I +S+ +IE I + Sbjct: 14 IFDFINTYFKVVVLLLIVLFLATLASDEEIESKPNLAKLYLNFPIYESESFAAQIEAIKK 73 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +D +++ + SPGG+ A I I+++ + PV+ + AS Y ++ I Sbjct: 74 NDDIKGVLLLIDSPGGAVGASIEIADMIKELNEKIPVVAYTQSLMASGSYYAGMYAHSIY 133 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A +L+GSIGV+F P + +DK+G+ ++ V + K S + + + ++ Sbjct: 134 ANRGALIGSIGVIFSAPNFEEAMDKIGIKMQGVSAGEYKEIGSITRKWKNTEKEFINNLT 193 Query: 183 DSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 Y F V +R + L ++G+I++ + A K+GLID V +V + L L Sbjct: 194 QEQYKMFYTDVIAARGERLKTKNHLDFAEGKIFSASNALKLGLIDGVNSMSKVEKILQNL 253 Query: 241 GVDQSIRKIK 250 + I +K Sbjct: 254 SGVEEIVWLK 263 >gi|325122976|gb|ADY82499.1| putative protease (SohB) [Acinetobacter calcoaceticus PHEA-2] Length = 318 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + L E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENLREEITLILA--TAKAGRDRIVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I+AA ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAAPFAIVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGEDALDLNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + ++ L Sbjct: 284 LQAAQMADSLIPTVIGKVMESL 305 >gi|49611742|emb|CAG75191.1| protease [Pectobacterium atrosepticum SCRI1043] Length = 350 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 6/204 (2%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQ 91 P + + G ++ + L E I + +++ L SPGG + +Q Sbjct: 101 KPCLYVLDFNGSMDAGEVSSLREEISAVLAVAKPKDEVLLRLESPGGVVHGYGLAASQLQ 160 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++C ++ IVAA ++VGSIGV+ Q P L + Sbjct: 161 RLRQGGVRLTVAVDKVAASGGYMMACVADHIVAAPFAIVGSIGVVAQIPNFHRLLKNKDI 220 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + + ++ ++ ++ F V + R P ++ G Sbjct: 221 DVELHTAGEFKRTLTLFGENTEQGREKFREDLNVTHTLFKDFVQQMR--PSLDIDSVATG 278 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +AK + LID +G +++ Sbjct: 279 EHWFGTQAKDLKLIDAIGTSDDLL 302 >gi|302805296|ref|XP_002984399.1| hypothetical protein SELMODRAFT_156630 [Selaginella moellendorffii] gi|300147787|gb|EFJ14449.1| hypothetical protein SELMODRAFT_156630 [Selaginella moellendorffii] Length = 559 Score = 206 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 12/243 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLS 74 W+ + +A + G I S IE+I ++ + A+++ + Sbjct: 254 WTLGLSGGKADIAVLRAVGNISRQKQMGFTGSGISSDAFIEQIRQVREAKNFKAVVLRID 313 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A A + ++R ++ + +KPVI + ++AAS GY ++ A+ +IVA +L GSIGV Sbjct: 314 SPGGDALASDLMWRELRLLAAKKPVIASMVDVAASGGYYMAMAAGVIVAERLTLTGSIGV 373 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + +++G + + + + P+ + ++Y F + Sbjct: 374 VTGKLNLGKLYERVGFTKEVISRGKFAELDAEQRPFRPEEAEFFGKSAKTAYKRFRDTAA 433 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 SR++ +K ++ GR+WTG A GL+D +GG + K+K Sbjct: 434 LSRSMQIEKMEEVAQGRVWTGKAAAARGLVDTLGGFSKAVAIAKQKAGISLESKVKLVEL 493 Query: 255 PKN 257 ++ Sbjct: 494 SRS 496 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 92/234 (39%), Gaps = 20/234 (8%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-----EAIFRAIQKVKNR-KPVITEVHE 105 ++ + + + + D A+IV + + + I R I+ K KP++ + Sbjct: 40 QICQNLIKAAHDPRIAAVIVQVE-----PLSCGWPKVDEICRHIEYYKQSGKPLVGYL-- 92 Query: 106 MAASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A G Y ++C+ + A + + +G+ Q +V L+K+GV + + K+ Sbjct: 93 --AVGGEKEYYLACSCGDVFAPPGAYISLLGLKVQAQFVGGVLEKIGVQPQIERIGKYKS 150 Query: 163 EPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 S +++ +M+ ++D Y ++ LV+ + L + I+ + + Sbjct: 151 VGDLLSRKDMSDANREMLTAILDDVYENWLDLVNIFAGKTTAEVENLLEEGIFEIEKLHQ 210 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 G I V +++V + + + K + + Y L +S D Sbjct: 211 QGWISDVKYEDQVIEEMLKAKLQIKDDKSPKYVDYRKYSRVREWTLGLSGGKAD 264 >gi|146278889|ref|YP_001169048.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145557130|gb|ABP71743.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 265 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 14/248 (5%) Query: 35 SPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 P V I ++G I Q L IE+ R + + ++SPGGS I Sbjct: 11 DPVVPVIRLQGVIATGARGGLSDQGLASLIEKAFRRGKPAGVALVINSPGGSPVQSSLIA 70 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ V V ++AAS GY ++CA + I E+S+VGSIGV+F F+ Sbjct: 71 ARIRRLAEEHEVRVHAFVEDVAASGGYWLACAGDDIWVDESSIVGSIGVIFASFGFHDFM 130 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + G+ + + K+ PF + ++ ++ + + + F+ V +R D++ Sbjct: 131 TRNGIERRVHTAGRSKSLADPFLPEKSEDIERLKALQEPIHRAFIDHVKRNRGARLDESA 190 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 L + IWTG EA ++GL D V Q +Y V ++ + + N Sbjct: 191 DLFNADIWTGQEAVRLGLADGVAHLVPKMQEIYGEKV-----RLVPYGQRRPLLQRLGMN 245 Query: 266 LSISSLLE 273 L L E Sbjct: 246 LFGHVLSE 253 >gi|163311059|pdb|3BEZ|A Chain A, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals gi|163311060|pdb|3BEZ|B Chain B, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals gi|163311061|pdb|3BEZ|C Chain C, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals gi|163311062|pdb|3BEZ|D Chain D, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals Length = 593 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 21/283 (7%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 285 AISYYDYALKTPADTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 344 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGGS A E I + + KPV+ AAS GY IS +N IVA ++L Sbjct: 345 LRVNSPGGSVTASEVIRAELAAARAAGKPVVVSXGGXAASGGYWISTPANYIVANPSTLT 404 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG+ V+ LD +GV V +SP+ S + P+A Q +++ Y F Sbjct: 405 GSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLXXQLSIENGYKRF 463 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + LV+++R+ ++ ++ G +WTG +AK GL+D +G ++ L K+ Sbjct: 464 ITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA------KV 517 Query: 250 KDWNPP---KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 K W+ F D + S + +P Q + A Sbjct: 518 KQWHLEYYVDEPTFFDKVXDNXSGSVRAXLPDAFQAXLPAPLA 560 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 90/218 (41%), Gaps = 17/218 (7%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++ I + D + T ++ L + GG + + I +A+++ ++ KPV + Sbjct: 74 DIVNTIRQAKDDRNITGIVXDLKNFAGGDQPSXQYIGKALKEFRDSGKPVYAVGENYS-Q 132 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + +V G Y K LDKL VS + K+ PF Sbjct: 133 GQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIR 192 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAK 219 + +P A + + + ++ V+ +R IP ++ + G + T A Sbjct: 193 DDXSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYAL 252 Query: 220 KVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWN 253 + L+D + E+ ++L D++ R I ++ Sbjct: 253 ENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYD 290 >gi|260767896|ref|ZP_05876830.1| SohB protein peptidase U7 family [Vibrio furnissii CIP 102972] gi|260615926|gb|EEX41111.1| SohB protein peptidase U7 family [Vibrio furnissii CIP 102972] gi|315179599|gb|ADT86513.1| sohB protein, peptidase U7 family protein [Vibrio furnissii NCTC 11218] Length = 353 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 10/214 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 PH+ + G I+ + E + I +++ +++ L + GG + Sbjct: 96 GGELDAKRDPHLFVLDFHGSIDAKEVTSLREEVTAILAVAQ--QGDEVLLRLETGGGMVH 153 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 154 GYGLASSQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPN 213 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + + + + K + F E + KA + ++ ++ ++ F + E R P Sbjct: 214 FNKLLKKHDIEFEQLTAGEYKRTLTMFGENSDKAREKFKEELEETHVLFKDFIREHR--P 271 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 272 DLDLEKVATGEHWFGTQAKALGLVDEIKTSDDLI 305 >gi|322833314|ref|YP_004213341.1| Peptidase S49 domain protein [Rahnella sp. Y9602] gi|321168515|gb|ADW74214.1| Peptidase S49 domain protein [Rahnella sp. Y9602] Length = 347 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 99/215 (46%), Gaps = 8/215 (3%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSA 80 + + P + + +G D+ E+ E IS + +++ L SPGG Sbjct: 88 LQAKTGSSKSKPCLYVLDFKGS-MDAHEVTSLREEISAVLAVATPEDEVLLRLESPGGVV 146 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + +++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 147 HGYGLAASQLVRLRQSGIRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIP 206 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L + + I+ + K + E + + ++ ++ ++ F V ++R Sbjct: 207 NFNRLLKRNDIDIELHTAGEFKRTLTLLGENTEEGREKFREDLNETHVLFKEFVHQNR-- 264 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 P ++ G W G +A++ GLID +G +++ Sbjct: 265 PSLDIDAVATGEHWFGTQARENGLIDAIGTSDDLL 299 >gi|111021003|ref|YP_703975.1| signal peptide peptidase [Rhodococcus jostii RHA1] gi|110820533|gb|ABG95817.1| possible signal peptide peptidase [Rhodococcus jostii RHA1] Length = 288 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 21/268 (7%) Query: 38 VARIAIRGQIED----------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 V + ++G I ++ + E + R A A+ + ++SPGGS E I Sbjct: 28 VPVVRLQGMIASGGAGFGRVLSAESVEEPLRRAFTTHGAKAVALLINSPGGSPTQSEYIA 87 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ PV+ ++ AS GY ++CA++ I A TS+VGS+GV+ + Sbjct: 88 ARIRQLATEHELPVLAFCEDVVASGGYWLACAADEIYATATSVVGSVGVISAGFGFSELI 147 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKT 204 D+LG+ + + KA PF + VQ ++ + + + F V R Sbjct: 148 DRLGIERRLHSAGEAKARLDPFFAEKSEDVQWLEQIQEGIHDEFRDWVVGRRGNKLKADG 207 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L +G +W G A ++G++D +G EV + + + P+ F L Sbjct: 208 AELFNGDVWLGRRAVELGIVDGIGTLREVVEKRFPDA-------TLEMTGPRRSLFAKL- 259 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 L +S E ++ + W+ + Sbjct: 260 GLPAASWDEVAAAIVGAASARVAWSRYG 287 >gi|88703297|ref|ZP_01101013.1| protease SohB [Congregibacter litoralis KT71] gi|88702011|gb|EAQ99114.1| protease SohB [Congregibacter litoralis KT71] Length = 355 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 18/264 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAY 81 + P + + G I S +E+ + + +D +++ L S GG + Sbjct: 98 GNEETPEQPRLYVLDFNGDIRASAVEELREEVSTLLGELRENDE---VLLRLESGGGMVH 154 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +Q+++N+ + V ++AAS GY+++C +N I+AA +++GSIGV+ Q P Sbjct: 155 SYGLASSQLQRIRNKGAKLTVAVDKVAASGGYMMACVANQIIAAPFAIIGSIGVIAQLPN 214 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + + + + K + F E K ++ ++ ++ F + V E+R Sbjct: 215 FHRVLKKNDIDFEVLTAGEYKRTLTIFGENTDKGRDKFKEELEDTHVLFKQFVKENR--E 272 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ G W G AK V L+D + +E Q A + + P+ W Sbjct: 273 VVDIDSVATGETWYGQRAKAVNLVDELQTSDEYIQDKLATHGVYELNYV-----PRKNWQ 327 Query: 261 CDLKNLSISSLLEDTIPLMKQTKV 284 L ++ + LE + + Q + Sbjct: 328 QKL-GIAAENALERSFLKLWQASL 350 >gi|213423129|ref|ZP_03356144.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 296 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 12/211 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 91 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 208 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P ++ G W G +A + GL+D + Sbjct: 266 PALDIEQVATGEHWYGQQALEKGLVDEINTS 296 >gi|169795179|ref|YP_001712972.1| putative periplasmic protease [Acinetobacter baumannii AYE] gi|213158157|ref|YP_002320208.1| peptidase S49 [Acinetobacter baumannii AB0057] gi|215482727|ref|YP_002324925.1| Peptidase family S49 family protein [Acinetobacter baumannii AB307-0294] gi|301348388|ref|ZP_07229129.1| putative periplasmic protease [Acinetobacter baumannii AB056] gi|301512513|ref|ZP_07237750.1| putative periplasmic protease [Acinetobacter baumannii AB058] gi|301596256|ref|ZP_07241264.1| putative periplasmic protease [Acinetobacter baumannii AB059] gi|332857060|ref|ZP_08436366.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332869998|ref|ZP_08438974.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013113] gi|169148106|emb|CAM85969.1| putative protease (SohB) [Acinetobacter baumannii AYE] gi|213057317|gb|ACJ42219.1| peptidase S49 [Acinetobacter baumannii AB0057] gi|213988882|gb|ACJ59181.1| Peptidase family S49 family protein [Acinetobacter baumannii AB307-0294] gi|332726875|gb|EGJ58389.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013150] gi|332732498|gb|EGJ63749.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6013113] Length = 320 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + L E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENLREEITLILA--TAKAGRDRVVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I++A ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGQDALDLNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + L Sbjct: 284 LQAAQMTDSLIPAVMNKVADTL 305 >gi|52549671|gb|AAU83520.1| protease IV [uncultured archaeon GZfos30H9] Length = 251 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 13/233 (5%) Query: 35 SPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I+G I + LI+ IE A++ ++SPGG+ +A + Sbjct: 9 KGSIAIIPIKGMITSEESGFGLMAASTVLIKDIEEAEIKRKIKAVLFEINSPGGTPFASK 68 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I I+ + KP I V E AAS Y I+ A + IVA E S VGSIG + P + Sbjct: 69 EIATCIENM--DKPAIAWVREYAASGAYWIASACDEIVADELSTVGSIGAMSIRPDIGEL 126 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + K G+ ++++++ K P+ ++ + ++M+ +D F+ V+++R + K Sbjct: 127 MKKFGIEVETLRTGIYKGLGLPYEKLTEEERELMKKELDEIQDNFLNAVAKNRKLDDVKM 186 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 LS +++ G EAK +GLID +GG+E + + KI D+ K Sbjct: 187 KELSTAKVYLGREAKDMGLIDHLGGKELAIRIAKERSGIRK-EKIVDYGERKR 238 >gi|162448648|ref|YP_001611015.1| protease IV [Sorangium cellulosum 'So ce 56'] gi|161159230|emb|CAN90535.1| protease IV [Sorangium cellulosum 'So ce 56'] Length = 602 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 11/217 (5%) Query: 35 SPHVARIAIRGQI-----------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 P + I + G I + L+ + ++ +I+ + SPGGSA A Sbjct: 319 RPILGVIEVHGAIVSRARFRGASLASEERLVASLRAARQNPRVQGVILHVDSPGGSALAS 378 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I + ++ KPV+ + +AAS GY ++ A++ IVA ++ GSIGV+ + P Sbjct: 379 DRIHHEVTRLAEVKPVVACLSNVAASGGYYVAAAAHAIVAQPQTITGSIGVVSARFALGP 438 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L++LGVS VK SP +++ +++ +D+ Y F+R+V+ R P ++ Sbjct: 439 LLERLGVSTDVVKRGARADLFSPSRKLDEGERAVVERELDAIYAAFLRVVARGRRRPVEE 498 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L+ GR+++GA+A+ GL+D++GG E L + Sbjct: 499 IEPLAQGRVYSGADAQARGLVDMLGGFERALHELRQM 535 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 79/194 (40%), Gaps = 7/194 (3%) Query: 51 QELIERIERISRDDSATALIVSLSS--PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 + + E + + RD L++ + S G + A + A+ +++ K ++ + A Sbjct: 65 ERVRELGKHLMRDPRPAGLLLRMRSVHAGPAVAAS--LRDALLEIRAGGKDIVAYLPMGA 122 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 + L++ A+ IV ++V +G + YV+ L+++GV + K Sbjct: 123 DTTTLLLASAARAIVVGPETMVSPLGFAVEGRYVRRALEQVGVEPEVFAKGMYKNAGEML 182 Query: 168 --SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ + + ++D +++ R + + D + +A G++D Sbjct: 183 VRDTMSAAQREQVGALLDGRLGDLTAALAQGRRVDRETAARWIDEAPFGAEQAVARGIVD 242 Query: 226 VVGGQEEVWQSLYA 239 V ++E+ L A Sbjct: 243 AVAYEDELEHMLAA 256 >gi|317492188|ref|ZP_07950618.1| peptidase family S49 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919893|gb|EFV41222.1| peptidase family S49 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 348 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 8/211 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGE 84 P + + +G D+ E+ E IS +++ L SPGG + Sbjct: 93 GIAAKEKPCLYVLDFKGS-MDAHEVSSLREEISAVLAVAKQGDEVLLRLESPGGVVHGYG 151 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q+++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 152 LAASQLQRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPNFNR 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +L K + ++ + K + E + + ++ ++ ++ F VS+ R P Sbjct: 212 WLKKNDIDVELHTAGEFKRTLTLLGENTEQGREKFREELNETHALFKSFVSQQR--PSLD 269 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK GL+D VG +++ Sbjct: 270 IDSVATGEHWYGIQAKDKGLVDSVGTSDDLL 300 >gi|319760105|ref|YP_004124044.1| peptidase S49 [Alicycliphilus denitrificans BC] gi|317119711|gb|ADV02199.1| peptidase S49 [Alicycliphilus denitrificans BC] Length = 315 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 8/230 (3%) Query: 20 LTVVYFSWSSHVEDNSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSL 73 L V+ + + HV I I G I ++ + + + + DDSA+A+++ + Sbjct: 46 LAGVWLASDLGPGKSKAHVPVIRIEGGIAGDSTKINADSVNKLLAKAFDDDSASAVVLYI 105 Query: 74 SSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 SPGGS + I I + K KP+ + M ASAGY+I+ + I A++ SL+GS Sbjct: 106 DSPGGSPAEADRIGSFIARKKQETGKPLYSVCANMCASAGYMIAMHGDEIYASKYSLIGS 165 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IG + + K+GV + S +KA +P++ V V+ Q++VD F Sbjct: 166 IGAILSSWNFSQAIGKVGVQHNAYASGKLKAMLNPYAPVKAGDVEKAQELVDGMGKVFAE 225 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V R + L G +W+G EAK GL+DV+G ++V + G Sbjct: 226 QVRFYRKGKLTSKVDLFTGEVWSGEEAKTYGLVDVIGTLDDVVHDKFPDG 275 >gi|169632872|ref|YP_001706608.1| putative periplasmic protease [Acinetobacter baumannii SDF] gi|184158970|ref|YP_001847309.1| putative periplasmic protease [Acinetobacter baumannii ACICU] gi|260556659|ref|ZP_05828877.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii ATCC 19606] gi|332874751|ref|ZP_08442621.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6014059] gi|169151664|emb|CAP00454.1| putative protease (SohB) [Acinetobacter baumannii] gi|183210564|gb|ACC57962.1| Periplasmic serine protease (ClpP class) [Acinetobacter baumannii ACICU] gi|193077950|gb|ABO12862.2| putative protease (SohB) [Acinetobacter baumannii ATCC 17978] gi|260409918|gb|EEX03218.1| signal peptide peptidase SppA, 36K type [Acinetobacter baumannii ATCC 19606] gi|322508952|gb|ADX04406.1| SohB [Acinetobacter baumannii 1656-2] gi|323518938|gb|ADX93319.1| putative periplasmic protease [Acinetobacter baumannii TCDC-AB0715] gi|332737012|gb|EGJ67969.1| putative signal peptide peptidase SppA [Acinetobacter baumannii 6014059] Length = 320 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + L E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENLREEITLILA--TAKAGRDRVVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I++A ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGQDALDLNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + L Sbjct: 284 LQAAQMADSLIPAVMNKVADTL 305 >gi|119864263|gb|ABM03740.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Psychromonas ingrahamii 37] Length = 360 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 14/266 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 S E + I +G I D++E+ E I+ + V L S GG + Sbjct: 103 SGLDEKGLAQLYVIDFKGSI-DAKEVTSLREEITAILGVATEQDEVFVRLESGGGMVHGY 161 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++ K P+ V ++AAS GY+++C +N I+AA +++GSIGV+ Q P Sbjct: 162 GLAASQLQRLRDHKIPLTISVDKVAASGGYMMACVANKIIAAPFAILGSIGVIAQIPNFN 221 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E + + ++ ++ F + VS+ R Sbjct: 222 KVLKKHDIEFEQLTAGEYKRTLTMFGENDQAGRDKFKQELEETHDLFKQFVSQQR--SQI 279 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G +A + L+D + ++ L L R I + F D Sbjct: 280 DIDKVATGEHWYGLQAIERNLVDQISTSDDYL--LTQL----DSRHIIQIKYTQRKKFAD 333 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLW 288 + LE+++ + QT+ L+ Sbjct: 334 KLGHAAVIALENSLLKIFQTQSNKLF 359 >gi|332559551|ref|ZP_08413873.1| Peptidase S49 [Rhodobacter sphaeroides WS8N] gi|332277263|gb|EGJ22578.1| Peptidase S49 [Rhodobacter sphaeroides WS8N] Length = 250 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 22/262 (8%) Query: 40 RIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 I ++G I Q L IE+ R + + ++SPGGS I I++ Sbjct: 1 MIRLQGMIASGPRGGLSDQGLAAVIEKAFRRGKPAGVALVINSPGGSPVQSSLITARIRR 60 Query: 93 VKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + K V V ++AAS GY ++CA + I E+SLVGSIGV+F F+ + G+ Sbjct: 61 LAFEKGVRVHAFVEDVAASGGYWLACAGDEIWVDESSLVGSIGVIFSSFGFHEFMARNGI 120 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + K+ PF P+ V+ ++ + + + F+ V +R D L + Sbjct: 121 ERRVHTAGRSKSLADPFLPEKPEDVERLKALQEPIHRAFIEHVKRNRGARLDLNADLFNA 180 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +WTG EA ++GL D V Q +Y V ++ + + +L+ + Sbjct: 181 DVWTGQEAVRLGLADGVAHLVPKLQEIYGDKV-----RLVPYGQRRPLLQRLGMSLAGQA 235 Query: 271 LLEDTIPLMKQTKVQGLWAVWN 292 L E + + LWA + Sbjct: 236 LAE--------VENRALWARYG 249 >gi|257388867|ref|YP_003178640.1| signal peptide peptidase SppA, 36K type [Halomicrobium mukohataei DSM 12286] gi|257171174|gb|ACV48933.1| signal peptide peptidase SppA, 36K type [Halomicrobium mukohataei DSM 12286] Length = 331 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 20/266 (7%) Query: 37 HVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +VA +A+ G I +++++E+IER D + AL+V L++PGG Sbjct: 67 NVAEVAVEGPISRDGGGSLASPPVGARAEDIVEQIERADDDSAVDALLVELNTPGGEIVP 126 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I A ++ P + ++ AS GY I+ + + A E S+VGSIGV+ K Sbjct: 127 SEDIRLAAERF--DGPTVGYATDVCASGGYDIAAGCDELWAREGSIVGSIGVIGSRVNAK 184 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 D++G+S + + K +P E + + +Q +VD Y FV V+E R + Sbjct: 185 ELADRVGLSYEQFTAGTFKDAGTPLKEFEQEEREYLQSIVDDYYEQFVDTVAEGRELDAA 244 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + ++ RI+ G+EA ++GL+D +G + +V L ++ + P + Sbjct: 245 EIRD-TEARIFLGSEAHELGLVDEIGTRRDVEAKLEE--QLGEPVTVEAFEPSRGLAGRL 301 Query: 263 LKNLSISSL-LEDTIPLMKQTKVQGL 287 ++ L + + GL Sbjct: 302 QTGAQTAAFALGAGVASAFDGDLDGL 327 >gi|37526334|ref|NP_929678.1| putative periplasmic protease [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785765|emb|CAE14813.1| Possible protease sohB [Photorhabdus luminescens subsp. laumondii TTO1] Length = 348 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 6/213 (2%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYA 82 + + H P + + +G ++ + L E I I A +++ L SPGG + Sbjct: 90 AKTGHKGLQKPCLYVLDFKGSMDAHEVDSLREEISAILAVADAKDEVLLRLESPGGMVHG 149 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + +++ + + V ++AAS GY+++C ++ +VAA +++GSIGV+ Q P + Sbjct: 150 YGLAASQLARLRQKGIRLTIVVDKVAASGGYMMACVADRVVAAPFAIIGSIGVVAQIPNI 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + ++ + K + E + + Q+ ++ ++ F + R P Sbjct: 210 HKLLKKNDIDVELHTAGEYKRTLTVLGENTEQGRKKFQEDLNQTHELFKSFIHTHR--PS 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G++AK+ GLID +G +++ Sbjct: 268 LDVESVATGEYWYGSQAKEKGLIDEIGVSDDLL 300 >gi|167856276|ref|ZP_02479008.1| putative protease SohB [Haemophilus parasuis 29755] gi|167852600|gb|EDS23882.1| putative protease SohB [Haemophilus parasuis 29755] Length = 351 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 10/235 (4%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS--QELIERIER--ISRDDSATALIVSLSSPGGSAYA 82 + E + + +G I+ S L + I+ +++ L SPGG + Sbjct: 93 GEENPEAEKSRLFVLNFQGDIQASGVSALRKEIDAVLALAKPEKDQVLLKLESPGGVVHG 152 Query: 83 GEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q++K++ P+ V ++AAS GY+++C +N IV+A +++GS+GV+ Q P + Sbjct: 153 YGLAASQLQRLKDKSIPLTVAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNI 212 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + E K Q Q ++ ++ F + V++ R P Sbjct: 213 HRLLKKHDIDVDVMTAGEYKRTVTFVGENTEKGKQKFQQELEETHRLFKQFVAQHR--PQ 270 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ++ G W G +A + L+D + +++ Q + ++K K Sbjct: 271 LDIEKIATGEHWFGQQAVEFNLVDELSTSDDLILDAVK---SQDVIEVKYQQKKK 322 >gi|89095506|ref|ZP_01168413.1| peptidase, U7 family protein [Oceanospirillum sp. MED92] gi|89080226|gb|EAR59491.1| peptidase, U7 family protein [Oceanospirillum sp. MED92] Length = 353 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 10/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E + + G I+ S+ + I I +++ + +++ L SPGG + Sbjct: 98 EPRRKRIYVVDFDGDIKASEVEPLRQEISAILQLAEAED--EIVIRLESPGGMVHEYGLA 155 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++K ++ + V +AAS GY+++C ++ ++AA ++VGSIGV+ Q P L Sbjct: 156 SSQIERIKRKELSLTICVDRVAASGGYMMACLADKLIAAPFAIVGSIGVIAQLPNFHRLL 215 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + F E K + + ++ ++ F V E R P Sbjct: 216 KKHDVDYEVLTAGEYKRTLTVFGENTEKGREKFVEELEETHELFKNFVHEYR--PQVDID 273 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G IW G +A + L+D + ++ IR Sbjct: 274 KVATGEIWFGKQALENQLVDELMTSDQYLIDAAEEADIFEIR 315 >gi|288935905|ref|YP_003439964.1| peptidase S49 domain protein [Klebsiella variicola At-22] gi|288890614|gb|ADC58932.1| Peptidase S49 domain protein [Klebsiella variicola At-22] Length = 363 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 12/214 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + P + +G ++ + E+ + D +++ L SPGG + Sbjct: 112 EGKPRAWVLDFKGSMDAHEVNSLREEITAVLAAAKARDQ---VVIRLESPGGVVHGYGLA 168 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q++++++ P+ V ++AAS GY+++C +N IV+A +++GSIGV+ Q P + FL Sbjct: 169 ASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFAILGSIGVVAQIPNLHRFL 228 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + I+ + K + E + + ++ ++ ++H F V R P Sbjct: 229 KNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHHLFKDFVHRMR--PGLDIE 286 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D V +E+ L Sbjct: 287 QVATGEHWYGVQALEKGLVDAVETSDELLLGLME 320 >gi|254438067|ref|ZP_05051561.1| peptidase, S49 (protease IV) family [Octadecabacter antarcticus 307] gi|198253513|gb|EDY77827.1| peptidase, S49 (protease IV) family [Octadecabacter antarcticus 307] Length = 262 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 12/251 (4%) Query: 33 DNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + PHVA I ++G I S + L + IE+ R A+ + +SSPGGS I Sbjct: 9 KSDPHVAVIRLQGTIASSGRSLNDRGLTDSIEKAFR-SKPKAVALEISSPGGSPVQSSLI 67 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ + K PV + V ++AAS GY ++ A + I S+VGSIGV+ + Sbjct: 68 CARIRRLADEKDIPVYSFVEDVAASGGYWLATAGDEIYVDRGSIVGSIGVITAGFGLTGT 127 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LDK+G + + K+ PF P V+ ++ ++D + +F VS R Sbjct: 128 LDKIGAERRVYTAGKSKSMLDPFQAEKPADVKRLKGLLDDLHVFFKDHVSTRRAGKIVD- 186 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L G IW G ++ VGL D +G + + G R+ P + + + Sbjct: 187 QDLFTGDIWVGQKSIDVGLADHLGHLVPTMKDRF--GDKTKFRRFGQKKPFLSRFGAQII 244 Query: 265 NLSISSLLEDT 275 + ++ + E Sbjct: 245 DDAVGGIEERA 255 >gi|239501142|ref|ZP_04660452.1| putative periplasmic protease [Acinetobacter baumannii AB900] Length = 320 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + L E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENLREEITLILA--TAKAGRDRIVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I++A ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGQDALDLNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + L Sbjct: 284 LQAAQMADSLIPAVMNKVADTL 305 >gi|316932585|ref|YP_004107567.1| peptidase S49 [Rhodopseudomonas palustris DX-1] gi|315600299|gb|ADU42834.1| peptidase S49 [Rhodopseudomonas palustris DX-1] Length = 300 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 19/270 (7%) Query: 36 PHVARIAIRGQIEDSQ---------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V + + G I + + ++R +A A+ ++++SPGGS I Sbjct: 31 PVVPVVRLSGTIGAVTPLRPGLTLASVAKLLDRAFSTRNAKAVALAINSPGGSPVQSRLI 90 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + K PV V ++AAS GY+I+CA++ I +S++GSIGV+ + Sbjct: 91 YLRIRALAAEKKLPVYAFVEDVAASGGYMIACAADEIYCDPSSILGSIGVVGGGFGFQEL 150 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 + K+GV + + KA+ PF +P+ V ++ + + F+ LV ESR + Sbjct: 151 IRKIGVERRLYTAGERKAQLDPFLPEDPQEVARLKVLQQEIHALFIALVKESRGARLKGE 210 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G W GA + +GL D +G V + + V + +PP Sbjct: 211 ESQLFTGEYWAGATSVSLGLADSIGDLRAVLREKFGDKVRTPL-----ISPPTGLLANLT 265 Query: 264 KNLSISSLLEDTIPLMKQTKVQGL--WAVW 291 + + D + + ++ + L A+W Sbjct: 266 RKSGGAEAALDGVAALPESMISALETRAIW 295 >gi|320540529|ref|ZP_08040179.1| putative predicted inner membrane peptidase [Serratia symbiotica str. Tucson] gi|320029460|gb|EFW11489.1| putative predicted inner membrane peptidase [Serratia symbiotica str. Tucson] Length = 348 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 8/214 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAY 81 + S +E P + + +G D+ E+ E IS + +++ L SPGG + Sbjct: 90 ARSGTIEVTQPCLYVLDFKGS-MDAHEVTSLREEISAVLAVASTQDEVLLRLESPGGVVH 148 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++ + V +AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 149 GYGLAASQLERLRKGGIRLTVAVDNVAASGGYMMACVADRIVAAPFAVIGSIGVVAQIPN 208 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F E + + + ++ ++ F + V + R P Sbjct: 209 FHRLLKKNDIDVELYTAGQFKRTLTLFGENTEQGREKFRSDLNKTHELFKQFVHQQR--P 266 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +S G W G +AK+ GLID +G +++ Sbjct: 267 SLDIGSVSTGEHWFGTQAKEKGLIDAIGTSDDLL 300 >gi|16081247|ref|NP_393553.1| protease (pspA) related protein [Thermoplasma acidophilum DSM 1728] gi|10639220|emb|CAC11222.1| protease (pspA) related protein [Thermoplasma acidophilum] Length = 230 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 3/221 (1%) Query: 37 HVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ++ R I G I + S L++ +S GG A A + +F I+K++ Sbjct: 2 YILRTRIEGTITQQLYRSYYPIFSFAENKRSVAGLVLVFNSGGGDAVASQLMFEMIRKIR 61 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 +KPV + + + AS Y IS S+ I + +TSL+GSIGV+ PY+KP LDK+GV +K Sbjct: 62 KKKPVYSFIQGICASGAYWISAGSSKIYSLDTSLIGSIGVISMIPYIKPLLDKIGVEMKI 121 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K K S + E + + + V++ Y F V RNIP DK ++ G+I++ Sbjct: 122 YKVGKYKDMLSSYREPSDEENEHYMRVLNDVYRKFRDSVMTERNIPEDKMEDIAQGQIFS 181 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNP 254 + A + LID +G + + +Y LG R I P Sbjct: 182 PSMAMENRLIDGIGTMDSMMDDMYRQLGRKYKTRDILPRRP 222 >gi|262402596|ref|ZP_06079157.1| SohB protein peptidase U7 family [Vibrio sp. RC586] gi|262351378|gb|EEZ00511.1| SohB protein peptidase U7 family [Vibrio sp. RC586] Length = 353 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 101 SKREPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 159 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 160 SQLDRIKEAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 219 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + ++ ++ F + + R P Sbjct: 220 KNDIEFEQLTAGEYKRTLTMFGENTDKARDKFKLELEETHQLFKDFIRDHR--PALDLDK 277 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + +++ Sbjct: 278 VATGEHWFGTQAKTLGLVDEIRTSDDLI 305 >gi|297734121|emb|CBI15368.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSL 73 W+ + +A I G I S++ IE+I + A+I+ + Sbjct: 114 WTLGLSGGKDQIAVIRASGSISRVRSPFSIPGSGITSEQFIEKIRSVRDSKRYKAVIIRI 173 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG A A + ++R I+ + KPVI + ++AAS GY ++ + IVA +L GSIG Sbjct: 174 DSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGTIVAENLTLTGSIG 233 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V+ + +K+G + + + + P ++ ++Y F Sbjct: 234 VVTGKFNLGTLYEKIGFNKEIISRGRFAELTAAEQRPFRPDEAELFAKSAQNAYKQFRDK 293 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + SR++ DK + GR+WTG +A GL+D +GG R + Sbjct: 294 AAFSRSMAVDKMEENAQGRVWTGKDAASRGLVDAIGGLSRAVAIAKQKADIPQDRPV 350 >gi|262043004|ref|ZP_06016147.1| peptidase U7 family SohB protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039606|gb|EEW40734.1| peptidase U7 family SohB protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSA 80 + + P + +G ++ + E+ + D +++ L SPGG Sbjct: 103 LGNAEPEGKPRAWVLDFKGSMDAHEVNSLREEITAVLAAAKARDQ---VVIRLESPGGVV 159 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q++++++ P+ V ++AAS GY+++C +N IV+A +++GSIGV+ Q P Sbjct: 160 HGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFAILGSIGVVAQIP 219 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + FL + I+ + K + E + + ++ ++ ++H F V R Sbjct: 220 NLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHHLFKDFVHRMR-- 277 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D V +E+ L Sbjct: 278 PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGLME 317 >gi|288960112|ref|YP_003450452.1| serine protease [Azospirillum sp. B510] gi|288912420|dbj|BAI73908.1| serine protease [Azospirillum sp. B510] Length = 296 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 17/268 (6%) Query: 35 SPHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P V+ + + G I + ++R A+ + ++SPGGS Sbjct: 19 GPLVSVVRLTGVIGQGGPLRSGLTLAGVAPLLDRAFAPKDQKAVALVVNSPGGSPVQSAL 78 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I + I+ + K PV + AAS GY ++CA++ I A E+S++GSIGV+ + Sbjct: 79 IAKRIRDLAEEKKVPVFAFCEDAAASGGYWLACAADEIWADESSILGSIGVVSSGFGLHG 138 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD- 202 +++ G+ + + K PFS V ++ + + F +V R Sbjct: 139 LIERHGIERRLYTAGDRKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRSRRGDRLKG 198 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG-----VDQSIRKIKDWNPPKN 257 L G W G +A +GLID +G V + + V++ ++ Sbjct: 199 AEEDLFSGAFWAGRKALALGLIDGLGDIRSVMRGRFGEKVRLRVVERERGLLRRAGLKAG 258 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 Y S D + + + Sbjct: 259 YGDAPALTAGASEAFADALVSAARQSLD 286 >gi|257064987|ref|YP_003144659.1| signal peptide peptidase SppA, 36K type [Slackia heliotrinireducens DSM 20476] gi|256792640|gb|ACV23310.1| signal peptide peptidase SppA, 36K type [Slackia heliotrinireducens DSM 20476] Length = 382 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 8/223 (3%) Query: 29 SHVEDNSPHVARIAIRGQI------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 VA I I G I + L + + + DD+ A+++ ++S GG+A A Sbjct: 112 GETTTYGDTVAVIDIDGTIQYDGTTNSPEGLRDVLTQAEEDDNIKAIVLHVNSGGGTATA 171 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 GE + + KPV+ + ASA Y+IS S+ I T+ +GSIG + Q V Sbjct: 172 GEEMSLLVADC--TKPVVVSSASINASAAYMISSQSDYIFVNHTTAIGSIGTVMQTYDVS 229 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 ++KLGV + ++ S+ K + + + QD+VD F+ LVSE R + Sbjct: 230 ELMEKLGVDVINIASAESKDSSYGTRPLTDEEIAYYQDLVDKINAQFIGLVSEGRGMDVS 289 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + L+ G +TG +A GL D VG ++ LG + Sbjct: 290 EVQALATGMEFTGDDAVDNGLADEVGTYDDALAKAAELGGIEG 332 >gi|332306445|ref|YP_004434296.1| Peptidase S49 domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173774|gb|AEE23028.1| Peptidase S49 domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 344 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 120/250 (48%), Gaps = 14/250 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIF 87 ED ++ I G D+ E+ E ++ ++V L S GG + Sbjct: 92 EDEKGNLYVIDFNGS-MDAHEVENLREEVTAVICIAKPKDEVLVRLESGGGVVHGYGLAA 150 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q++K++K P+ V ++AAS GY+++C ++ ++AA+ +++GSIGV+ Q P L Sbjct: 151 SQLQRLKDKKIPLTVSVDKVAASGGYMMACVADNVLAAKFAIIGSIGVIAQIPNFNKLLK 210 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + K + F E N + + +D ++ + F V E R P Sbjct: 211 KNDIEFEQHTAGQFKRTLTMFGENNDEGREKFRDELEDVHQMFKGFVQEHR--PALAIDT 268 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL 266 ++ G W G++A ++GL+D + ++ L + D+ I +K ++ KN + + Sbjct: 269 VATGEYWYGSKALELGLVDTIQTSDDF---LLSANSDKKIYSVK-YSVKKN--LAEKFGM 322 Query: 267 SISSLLEDTI 276 S+S + +T+ Sbjct: 323 SVSHGVANTL 332 >gi|229358029|ref|YP_943339.2| putative periplasmic protease [Psychromonas ingrahamii 37] Length = 349 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 14/266 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAG 83 S E + I +G I D++E+ E I+ + V L S GG + Sbjct: 92 SGLDEKGLAQLYVIDFKGSI-DAKEVTSLREEITAILGVATEQDEVFVRLESGGGMVHGY 150 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++++ K P+ V ++AAS GY+++C +N I+AA +++GSIGV+ Q P Sbjct: 151 GLAASQLQRLRDHKIPLTISVDKVAASGGYMMACVANKIIAAPFAILGSIGVIAQIPNFN 210 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E + + ++ ++ F + VS+ R Sbjct: 211 KVLKKHDIEFEQLTAGEYKRTLTMFGENDQAGRDKFKQELEETHDLFKQFVSQQR--SQI 268 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G +A + L+D + ++ L L R I + F D Sbjct: 269 DIDKVATGEHWYGLQAIERNLVDQISTSDDYL--LTQL----DSRHIIQIKYTQRKKFAD 322 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLW 288 + LE+++ + QT+ L+ Sbjct: 323 KLGHAAVIALENSLLKIFQTQSNKLF 348 >gi|93006012|ref|YP_580449.1| putative periplasmic protease [Psychrobacter cryohalolentis K5] gi|92393690|gb|ABE74965.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Psychrobacter cryohalolentis K5] Length = 326 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 103/256 (40%), Gaps = 12/256 (4%) Query: 37 HVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 V + G I+ + +E+ I ++ D ++V L S GG + + Sbjct: 69 QVFVLDFDGDIKATAVKHLREEISTLISTANKGDE---VVVRLESGGGVVHGYGLAAAQL 125 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P +L Sbjct: 126 ARLKDAGLKLTVCVDKVAASGGYMMACVADNIVAAPFAIIGSIGVVSQLPNFHKWLKNHD 185 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V + + K + F E + + Q+ ++ ++ F V+ R + ++ Sbjct: 186 VDYEMFTAGDYKRTVTVFGENDDEDRAKYQEELEQTHELFKHFVNRYRGM--LDVDKVAT 243 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 G W G +A + L+D + + ++ + + +IS Sbjct: 244 GEHWYGEDALHLNLVDKLQTSDSYLLERMENNEVYALHSRQKPTLAEKLGLSQAAEATIS 303 Query: 270 SLLEDTIPLMKQTKVQ 285 ++ + + + Sbjct: 304 MAVDKLPDALARFDLN 319 >gi|261379008|ref|ZP_05983581.1| peptidase, S49 family [Neisseria cinerea ATCC 14685] gi|269144540|gb|EEZ70958.1| peptidase, S49 family [Neisseria cinerea ATCC 14685] Length = 350 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 102/224 (45%), Gaps = 10/224 (4%) Query: 30 HVEDNSPHVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 E P + + G + + + + I R + +++ L SPGG + Sbjct: 97 SAETQKPRLFVLDFDGDLYARAVGALRNEVTAVLSIVRPED--EVLLRLESPGGVVHGYG 154 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + P + Sbjct: 155 LAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEVPNIHR 214 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + + K + E K Q Q ++ ++ F + VSE+R P Sbjct: 215 LLKKYDIDVDVMTAGEFKRTVTFMGENTEKGKQKFQQELEETHQLFKQFVSENR--PQLD 272 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ G W G +A ++ L+D + +++ + ++ Sbjct: 273 IEKVATGEHWFGRQALELNLVDSISTSDDLLLKAFENKQIIEVK 316 >gi|238898830|ref|YP_002924512.1| putative peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466590|gb|ACQ68364.1| putative peptidase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 348 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 10/211 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S P + I G I+ Q E + I + + ++ + L SPGG + Sbjct: 92 SGQHHSQKPCIYVIDFNGSIDAHQVSSLREEVSAILSVMTKED--SVFLRLESPGGVVHG 149 Query: 83 GEAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + + + ++ V ++AAS GY+++C + I++A +++GSIGV+ Q P Sbjct: 150 YGLAASQLARFRQAGVSLVVSVDKIAASGGYMMACVGDHILSAPFAIIGSIGVVAQIPNF 209 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL K + ++ + K + F E + + + ++ ++ F + V E R P Sbjct: 210 HRFLQKNNIDVELHTAGEFKRTLTVFGENTEQGREKFCEELNETHLLFKQFVQEKR--PQ 267 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 +S G W G +AK+ GL+D +G ++ Sbjct: 268 IDINTVSTGEHWFGVQAKEKGLVDSIGTSDD 298 >gi|190573850|ref|YP_001971695.1| putative head-tail preconnector protein [Stenotrophomonas maltophilia K279a] gi|190011772|emb|CAQ45392.1| putative head-tail preconnector protein [Stenotrophomonas maltophilia K279a] Length = 402 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + I G + QEL +++ D S A+++ + SPGG + Sbjct: 58 IAVLPIYGTLVRRAVGLEAASGLTSYQELATQLDAAIADPSVAAIVLDIDSPGGESGGVF 117 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++ KPV ++MA SA Y + A+N T VGSIGV+ + Sbjct: 118 DLADRVRAAARIKPVWALANDMAYSAAYALGSAANRFFVTRTGGVGSIGVIAMHADQSVR 177 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV +V + K + +P ++ +A ++ VD Y FV V+ R + D Sbjct: 178 DAQDGVRYTTVFAGARKNDLNPHEPISDEAHAFLKSEVDRIYSLFVDTVASHRGLTGDAV 237 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ ++ G +A GL D VG +++ L Sbjct: 238 RA-TEAGVFFGQDAVAAGLADAVGTFDDLLAEL 269 >gi|254514364|ref|ZP_05126425.1| peptidase S49 [gamma proteobacterium NOR5-3] gi|219676607|gb|EED32972.1| peptidase S49 [gamma proteobacterium NOR5-3] Length = 355 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 18/264 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAY 81 S P + + G I S +E+ + + D +++ L S GG + Sbjct: 98 GSEASAEKPRLYVLDFDGDIRASAVEQLREEVSTLLGELRDTDE---VLLRLESGGGMVH 154 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +Q+++ + + V ++AAS GY+++C +N I+AA +++GSIGV+ Q P Sbjct: 155 SYGLASSQLQRIRAKGVKLTVAVDKVAASGGYMMACVANEIIAAPFAIIGSIGVVAQLPN 214 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + + K + F E K + ++ ++ ++ F + V E+R Sbjct: 215 FHRVLKKNDIDVEILTAGEYKRTLTVFGENTDKGREKFKEELEDTHVLFKQFVKENR--E 272 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + ++ G W G AK V L+D + +E Q + + P+ W Sbjct: 273 VVEIDSVATGETWYGQRAKDVNLVDAIQTSDEYIQDKLESHGVFELTYV-----PRKNWQ 327 Query: 261 CDLKNLSISSLLEDTIPLMKQTKV 284 L ++ + LE + + Q + Sbjct: 328 QKL-GIAAENALERSFLKLWQASL 350 >gi|226952528|ref|ZP_03822992.1| protease SohB [Acinetobacter sp. ATCC 27244] gi|294649823|ref|ZP_06727225.1| protease SohB [Acinetobacter haemolyticus ATCC 19194] gi|226836710|gb|EEH69093.1| protease SohB [Acinetobacter sp. ATCC 27244] gi|292824306|gb|EFF83107.1| protease SohB [Acinetobacter haemolyticus ATCC 19194] Length = 320 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 17/263 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEA 85 + N + + +G ++ S + E I I +A A ++V L SPGG + Sbjct: 53 KKNDKKIYVLDFKGDMQASAVDTIREEITLILA--TAKAGHDRVVVRLESPGGMVHGYGL 110 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++++ V V ++AAS GY+++C ++ I++A ++VGSIGV+ Q P Sbjct: 111 AAAQLVRLRDAGFHVTICVDKVAASGGYMMACIASEIISAPFAVVGSIGVVAQVPNFNRL 170 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + V + K + F E P+ ++ + ++ F + + R P Sbjct: 171 LKQHHVDFDLYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFIEKYR--PQLDV 228 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G W G +A+++ L+D + +E L S + N K F + Sbjct: 229 EKVATGEHWYGEDARQLNLVDKLQTSDEYLLGLL------SQHDVYVINTRKRPTFGEKL 282 Query: 265 NLSISSLLEDTIPLMKQTKVQGL 287 L + + E+ IP + L Sbjct: 283 GLQAAQMAENLIPTVMGKLADSL 305 >gi|269468535|gb|EEZ80189.1| periplasmic serine protease, ClpP class [uncultured SUP05 cluster bacterium] Length = 320 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 22/287 (7%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFSWSSHVE------------DNSPHVARIAIRGQIED 49 EFV + + L L V YF + S++ SP A + + G I+ Sbjct: 20 EFVRQNKTRTRWRMVLTLLFVGYFGFISYLSIEQSDLLEEVLKKESPFAAEVVLSGTIQT 79 Query: 50 SQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITE 102 S E+ +E + + ++ A+I+ L+SPGGS I++ I ++K + K + Sbjct: 80 SGEINADDALELLNDAFKAKNSKAVILRLNSPGGSPVQSSQIYQGILRLKKQHNKKLYVV 139 Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + ++ AS Y I+ +++ I A E+S+VGSIGV+ + KLG+ + + K Sbjct: 140 IDDVCASGCYYIAASADAIYADESSIVGSIGVVISSFGAVEAIKKLGIERRLYTAGKHKG 199 Query: 163 EPSPFSEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 FS+ + A+ ++ + D S+ F+ + +R L G IW G +A+K+ Sbjct: 200 LLDAFSDEDKTAIVHIKKNILDKSHQNFINAIKATRGDKLSDHPDLFSGLIWLGKDAEKL 259 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 GLID + + V + +GVD + K+ + K +++ Sbjct: 260 GLIDGIADADYVASEI--IGVDARVIYEKEKTLLEELTEASAKGIAL 304 >gi|262198128|ref|YP_003269337.1| signal peptide peptidase SppA, 36K type [Haliangium ochraceum DSM 14365] gi|262081475|gb|ACY17444.1| signal peptide peptidase SppA, 36K type [Haliangium ochraceum DSM 14365] Length = 875 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 16/252 (6%) Query: 35 SPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPGGS 79 P VA IA+ G I S+ L++ I + A+++ + SPGGS Sbjct: 577 QPAVAVIALEGDIVAGPSAGLPLLGRRVAGSETLVQAIAWARHNPRIQAIVLRIDSPGGS 636 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A A I R + K + KP++ + AAS GY + + I A T++ GSIGV Sbjct: 637 AVASALIAREVFKTRGVKPIVCSLGNAAASGGYYAAAGCDQIFAEATTITGSIGVFSGKF 696 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L +LGVS + + + S + ++++ + SY F+ V+ RN+ Sbjct: 697 DISGLLTRLGVSWQLYERGAHASMNSMLRPFTTEERALLENQLRDSYERFIDTVASGRNM 756 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL-YALGVDQSIRKIKDWNPPKNY 258 D+ + GR+WTG +AK VGL+D +GG + + + G+ R W P + Sbjct: 757 TPDQVDEIGRGRVWTGQQAKAVGLVDDIGGLLDALSAAKHRAGLLPEQRVELVWLPEEPR 816 Query: 259 WFCDLKNLSISS 270 + + Sbjct: 817 GLARWLMQQVGA 828 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 99/224 (44%), Gaps = 19/224 (8%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIE---RIERISRDDSATALIVSLSSPGGSAYAGEA 85 V + ++A+ G++ D+++L ++ ++RDDS + V ++ P E Sbjct: 339 PSVLGRERRIEQVALAGRL-DTRKLARALVQLRLLARDDSVAGVFVQIADPVEGWAQAEE 397 Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAG---YLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + A+ +++ K V + S Y I+ ++ I + +G+ Y+ Sbjct: 398 LRGALGELRRAGKKVYAYL----VSGSMRDYFIATGADKIYLDPAGGLDFVGLSATSLYL 453 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L++ GV+ + K K+ P F+ + A++M ++ DS + V ++E+R + Sbjct: 454 GEALERAGVAAEFEKIEEYKSAPETFTQDGPSEAALRMRNELYDSVFAELVTRIAEARKL 513 Query: 200 PYDKTLVLSDGRIWTGAEAKKVG----LIDVVGGQEEVWQSLYA 239 D L D +T EA + G L+D V E+V ++A Sbjct: 514 DADTVEALIDEGPYTA-EALQRGTAALLVDEVVTLEDVGARVFA 556 >gi|163792424|ref|ZP_02186401.1| proteinase [alpha proteobacterium BAL199] gi|159182129|gb|EDP66638.1| proteinase [alpha proteobacterium BAL199] Length = 287 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 16/279 (5%) Query: 29 SHVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGS 79 V P V+ + +RG I + L +E R S TA+ + ++SPGGS Sbjct: 9 DRVRGRPPIVSVVPLRGVIGNLGPMNRGLTIDALAPLLEAAFRPRSVTAVALVVNSPGGS 68 Query: 80 AYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 E I I+ + KPV+ V ++AAS GY ++CA++ + TS++GSI V+ Sbjct: 69 PVQSELIAGRIRDLAAECDKPVVAFVEDVAASGGYWLACAADEVRVTGTSIIGSIEVISS 128 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + KLG+ + + KA PF P V ++ + + F+ V R Sbjct: 129 GFGFQEAIGKLGIERRVHTAGSRKALLDPFQSERPDDVAHLKAIQAEMHERFISWVRSRR 188 Query: 198 N--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 + D L +G+ WTGA +GL D G + Y + K K Sbjct: 189 GDLLKVDDEPELLEGKFWTGARGVALGLADGEGELRRTLRERYGARTRFRVLKRKQ-GLA 247 Query: 256 KNYWFCDLKNLSISSL--LEDTIPLMKQTKVQGLWAVWN 292 + + + S L L+ + + LW+ + Sbjct: 248 RRFGLAQSEWGSAGELPFAGWADGLIAAVEERALWSRFG 286 >gi|255318358|ref|ZP_05359591.1| putative protease SohB [Acinetobacter radioresistens SK82] gi|262378588|ref|ZP_06071745.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] gi|255304350|gb|EET83534.1| putative protease SohB [Acinetobacter radioresistens SK82] gi|262299873|gb|EEY87785.1| signal peptide peptidase SppA, 36K type [Acinetobacter radioresistens SH164] Length = 320 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 17/263 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEA 85 + N+ + I +G ++ S + L E I I +A A ++V L SPGG + Sbjct: 53 KKNNQKIYVIDFKGDVQASAVENLREEITLILA--TAKAGKDRVVVRLESPGGMVHGYGL 110 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++++ + V ++AAS GY+++C +N I+ A ++VGSIGV+ Q P Sbjct: 111 AAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIITAPFAVVGSIGVVAQVPNFNRL 170 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + V + + K + F E P+ + + ++ F V + R P Sbjct: 171 LKEHNVDFELYTAGEYKRTVTMFGENTPEGKAKFEQELQQTHALFKHFVEKYR--PKLNV 228 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G W G +A + L+D + +E L AL + + + + Sbjct: 229 EKVATGEHWYGQDALDLNLVDELKTSDEYL--LSAL----PQHDVYVISTRRKPTLGEKL 282 Query: 265 NLSISSLLEDTIPLMKQTKVQGL 287 L + + + +P + + L Sbjct: 283 GLQAAQMADALVPAVLNKVMDTL 305 >gi|114769102|ref|ZP_01446728.1| peptidase, family S49 [alpha proteobacterium HTCC2255] gi|114550019|gb|EAU52900.1| peptidase, family S49 [alpha proteobacterium HTCC2255] Length = 261 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 9/203 (4%) Query: 33 DNSPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 V+ + + G I + L +E+ A+ + ++SPGGS I Sbjct: 9 KKRKSVSIVNLNGMIATGRGLNDAGLAPALEKAFS-KKPDAVALVINSPGGSPVQSSLIG 67 Query: 88 RAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+++ N K PV V ++AAS GY ++ +++ I +S+VGSIGV+ + + Sbjct: 68 ARIRRLANEKDIPVYAFVEDLAASGGYWLAASADEIYIDPSSVVGSIGVISTGFGLDQLI 127 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +K G+ + + K+ PF + ++ ++ +++ + F +S R Sbjct: 128 NKHGIERRVHTAGNSKSMLDPFQPQKDEDIKRLKKLLEDVHQNFKDHISSCRGSKLAD-R 186 Query: 206 VLSDGRIWTGAEAKKVGLIDVVG 228 L G IW G A GL+D +G Sbjct: 187 DLFTGEIWVGQRAIDDGLVDGIG 209 >gi|71278653|ref|YP_267936.1| putative periplasmic protease [Colwellia psychrerythraea 34H] gi|71144393|gb|AAZ24866.1| sohB protein, peptidase U7 family [Colwellia psychrerythraea 34H] Length = 349 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 18/258 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 E + HV + G I+ + E + I +++ + + V L S GG + Sbjct: 93 GEDKEPSKSHVFVVDFNGSIDAKEVSSLREEVSAILSVAKPED--EVFVRLESGGGMVHG 150 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + +++ P+ V ++AAS GY+++C +N I++A +++GSIGV+ Q P Sbjct: 151 YGLASSQLDRIRQHNIPLTVSVDKVAASGGYMMACVANNIISAPFAILGSIGVIAQVPNF 210 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + K + F E K + + ++ ++ F VSE R P Sbjct: 211 NKLLKKHDIDFEQFTAGEFKRTVTMFGENTEKGKEKFIEELEETHVLFKNFVSERR--PS 268 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW-- 259 + ++ G W G A ++GL+D + ++ Q G +S + + K Sbjct: 269 LDIVKVATGEHWFGTTALELGLVDSIQTSDDYLQ-----GKSKSHKVVAIKYEVKKGLAE 323 Query: 260 -FCDLKNLSISSLLEDTI 276 F +LS S L I Sbjct: 324 KFSKAASLSAESFLGKLI 341 >gi|219871521|ref|YP_002475896.1| putative periplasmic protease [Haemophilus parasuis SH0165] gi|219691725|gb|ACL32948.1| putative periplasmic protease, secreted serine protease [Haemophilus parasuis SH0165] Length = 351 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 14/237 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + E + + +G I+ S + + + +++ L SPGG Sbjct: 93 GEENPEAEKSRLFVLNFQGDIQASG--VSALRKEVDAVLALAKPEKDQVLLKLESPGGVV 150 Query: 81 YAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q++K++ P+ V ++AAS GY+++C +N IV+A +++GS+GV+ Q P Sbjct: 151 HGYGLAASQLQRLKDKSIPLTVAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVP 210 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K + + + + K + E K Q Q ++ ++ F + V++ R Sbjct: 211 NIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHRLFKQFVAQHR-- 268 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 P ++ G W G +A + L+D + +++ Q + ++K K Sbjct: 269 PQLDIEKIATGEHWFGQQAVEFNLVDELSTSDDLILDAVK---SQDVIEVKYQQKKK 322 >gi|329897050|ref|ZP_08271822.1| protease IV, a signal peptide peptidase [gamma proteobacterium IMCC3088] gi|328921490|gb|EGG28876.1| protease IV, a signal peptide peptidase [gamma proteobacterium IMCC3088] Length = 604 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 E + VA + ++G I++ + ++ + DS A+++ ++SPGGS A Sbjct: 317 EQHENAVAVVFVQGGIQEGPQGPGVAGADDIANLLRTAYSKDSTKAIVLRVNSPGGSIIA 376 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E I + + + PV+ + ++AAS G +S +++ I A T++ GSIGV +P Sbjct: 377 SEMIRDEVSAAQRKGIPVVVSMGDVAASGGVWVSMSADKIYAEPTTISGSIGVAVAFPTF 436 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + +D G++ V ++ SP ++ + ++Y FV LV+E RN Sbjct: 437 ERVMDWAGINFDGVTTAENTG-WSPVLPMSDALDALFARWASTAYDRFVNLVAEGRNKEP 495 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 D ++ GR+W G+ A+++GL+D +G Sbjct: 496 DYIRSIAGGRVWIGSMAQELGLVDAMGD 523 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 95/274 (34%), Gaps = 42/274 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ----------- 51 FVL I V ++L++ V V IA +G + D + Sbjct: 19 FVLNLITFAIV-IALISGVVQSIFDRPEEPTADGKVLMIAPKGLVLDQETFPDELEFPFN 77 Query: 52 ----------ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPV 99 +L+ + R + D S A+ + + A+ + + +++ KP+ Sbjct: 78 VSDVEQIQTRDLVALLRRAAEDSSLAAVSIDFSETGFAGPTTALAVAKELSALRDTGKPI 137 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSS 158 I + YL++ ++ + + S+ L Y L DKL +++ + Sbjct: 138 IAYSRALGT-GSYLMASQADEVFVHPAGAL-SVSGLGGYRDYTRDLTDKLRINVHNYSQG 195 Query: 159 PMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD------- 209 K+ +++ Q +++ + ++ R++ ++D Sbjct: 196 DYKSATEGLTRRDMSDADRQQRTELLQPIWQEMKARMAAGRDVDASVIQDMADNYSVPLL 255 Query: 210 GRIWTG----AEAKKVGLIDVVGGQEEVWQSLYA 239 G G A+A+ +GLID E + + Sbjct: 256 GE--AGYHNLAQAEAMGLIDGTMNFPEYREYMME 287 >gi|300711899|ref|YP_003737713.1| signal peptide peptidase SppA, 36K type [Halalkalicoccus jeotgali B3] gi|299125582|gb|ADJ15921.1| signal peptide peptidase SppA, 36K type [Halalkalicoccus jeotgali B3] Length = 331 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 19/255 (7%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------------SQELIER 56 ++++ + + S + + +VA++A+ G I + +++E+ Sbjct: 41 LLVIATALIGLRIASRLASKAFTTYNVAQVAVEGPISRDGGGGRLPNGPNTTPTDDVVEQ 100 Query: 57 IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC 116 IE + D L+V L++PGG + I RAI P I ++ S GY I+ Sbjct: 101 IEAAADDGDVEGLLVKLNTPGGEVVPSDDIRRAIVAF--EGPAIAYTTDVCGSGGYWIAS 158 Query: 117 ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ 176 + ++A E SLVGSIGV+ +++G+S + + K P E++ Sbjct: 159 GCDELLAREASLVGSIGVIGSRVNAAALAERVGLSYERFAAGEFKDAGVPLREMDDHERA 218 Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +Q ++D Y FV V+E R + ++ ++ R++ G EA ++GL+D +G +E+ Sbjct: 219 YLQGLIDDFYGQFVERVAEGRELSEEEVRA-TEARVYVGEEALELGLVDALGTREDAEDR 277 Query: 237 LYA-LGVDQSIRKIK 250 L L +D +R + Sbjct: 278 LADLLDIDPEVRAFE 292 >gi|162456988|ref|YP_001619355.1| Signal peptide peptidase [Sorangium cellulosum 'So ce 56'] gi|161167570|emb|CAN98875.1| Signal peptide peptidase [Sorangium cellulosum 'So ce 56'] Length = 619 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 24/298 (8%) Query: 19 TLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------QELIERIERISRDD 64 +L V+ S S +PHVA + G I S +EL + I R++ D Sbjct: 287 SLVDVFRSVSGASSLGAPHVAVVPAIGGITMSAKGMPIGSSDGIGERELGKTITRLTEDQ 346 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 SA A+++ + SPGGSA A + +++ + +++ +KP++ + MAAS GY ++CA IVA Sbjct: 347 SAKAVVLRIDSPGGSALASDLLWQKLMRLRQQKPLVVSIGGMAASGGYYLACAGTKIVAE 406 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM------KAEPSPFSEVNPKAVQMM 178 TS++GSIGV+ V L +G++ ++V ++P A S + + + Sbjct: 407 RTSIIGSIGVVGGKFAVGKALADIGINAETVAANPDPQRAARAAYMSALTPWDEPTRARV 466 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---Q 235 +++ Y F++ ++ RN+P + ++GRI+ G EA L+D +GG E + Sbjct: 467 LASMEAVYDLFLKRITAGRNLPLETIAPSAEGRIFGGVEAAGRSLVDELGGLERAIALAR 526 Query: 236 SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 L L D + +D + S+ D L ++ + + + +V P Sbjct: 527 ELAELPTDAPVEIEQDDGGLLELLATGDEANEGSARAPDRAALKERAR-EAMASVLLP 583 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-----KNRKPVITEVHEM 106 +L++ + +S SA +V L GSA A I ++ +PV+ E Sbjct: 76 QLVQSLRALSESASAKGFLVRL----GSARLAFARAHEIGRILGDVRAAGRPVVCHADEY 131 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + L S A + + + V ++G+ Q + K LDKL V + ++ K P Sbjct: 132 NNATMLLASIACSKLWLSPAGQVDTVGIAAQLVFAKGLLDKLNVDVDFLQVGKFKGASEP 191 Query: 167 FSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 F+ +P+A + ++ + ++ + E R + L DG + EAK L+ Sbjct: 192 FTREGASPEARRSLESALGGVREVWLSAIVEGRGKEALR-EALEDG-PFAPEEAKARALV 249 Query: 225 DVVGGQEEVWQSLYALGVDQ 244 D +G E + L + Sbjct: 250 DEIGDLESATEDAKKLAGTE 269 >gi|261210784|ref|ZP_05925076.1| SohB protein peptidase U7 family [Vibrio sp. RC341] gi|260840269|gb|EEX66849.1| SohB protein peptidase U7 family [Vibrio sp. RC341] Length = 255 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIF 87 PH+ + G I D++E+ E +S + +++ L + GG + Sbjct: 3 SKREPHLFVLDFHGSI-DAKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLAS 61 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 62 SQLDRIKEAGLPLTISVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLK 121 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + ++ ++ F + + R P Sbjct: 122 KNDIEFEQLTAGEYKRTLTMFGENTDKARDKFKLELEETHQLFKDFIRDHR--PALDLDK 179 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A+ +GL+D + +++ Sbjct: 180 VATGEHWFGTQAQTLGLVDEIRTSDDLI 207 >gi|288917963|ref|ZP_06412322.1| signal peptide peptidase SppA, 36K type [Frankia sp. EUN1f] gi|288350618|gb|EFC84836.1| signal peptide peptidase SppA, 36K type [Frankia sp. EUN1f] Length = 692 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 5/257 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 A + G + + + +RD S A + + SPGGS A + + R I++ + Sbjct: 372 AALPFGGPVLAADAVTAAFRAAARDSSVAAAVFRVDSPGGSYVASDVVRREIERFRATGR 431 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PVI + +AAS GY ++ ++IVA +L GSIGV V+ LDK+G+ +V + Sbjct: 432 PVIVSMGAVAASGGYFVALGGDLIVANPGTLTGSIGVFGGKQVVRDLLDKVGIGFGAVAA 491 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 SP +++ +D Y FV V+++R + + + L+ GR+WTGA+ Sbjct: 492 GENALMMSPRQSFTEAERAKLEEFLDRVYADFVGKVAQARRMSHAEAHELARGRVWTGAD 551 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS----SLLE 273 A + GL+D +GG +A + + PK L+ S + Sbjct: 552 AHRHGLVDELGGLAHAIDLAWARAGLPAEETPRVRLTPKPSVLDRLRTPKSSEEPGAAAA 611 Query: 274 DTIPLMKQTKVQGLWAV 290 T+ + ++G+ V Sbjct: 612 RTVTSLGVPGIRGVLGV 628 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 9/201 (4%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVI-TEVHEMAA 108 +E+++ + R +RDD A L+ + + GG A + + A+ + + V Sbjct: 46 REVVDGLRRAARDDRAKVLVAHI-AAGGMPLARVQEVRDAVAEFRASGGVTFAYADTFGE 104 Query: 109 SAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 G Y ++CA + I A VG GV + P+++ LD+LGVS++ + K Sbjct: 105 FGGGTVAYYLACAFDEIWLAPPGDVGLTGVAMETPFLREALDRLGVSVEIGQRHEYKNAV 164 Query: 165 SPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + + P + + +VDS V VS R + D+ + D +G A + G Sbjct: 165 NTLVERDFTPAHREALGRIVDSCAEQVVAEVSARRGLSPDQVRRMIDDAPMSGRAALEAG 224 Query: 223 LIDVVGGQEEVWQSLYALGVD 243 L+D +G ++E + + + Sbjct: 225 LVDRIGYRDEAYDQVRTRARE 245 >gi|313618717|gb|EFR90640.1| putative signal peptide peptidase SppA [Listeria innocua FSL S4-378] Length = 206 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 4/196 (2%) Query: 94 KNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K RK P + MAAS GY IS ++ I A++ +L GS+GV+ Q + KLGVS Sbjct: 3 KERKIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVIMQGYDYSELMKKLGVSD 62 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++KS K S + ++MQ ++D SY+ FV++V+ R + ++ ++DGRI Sbjct: 63 NTIKSGAYKDIMSGTRPMTDDEKKIMQSMIDDSYNEFVKVVATGRGMSEEQVRKIADGRI 122 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 + G +AK+ GLID G QE+ ++L + I+ P F L +++ + Sbjct: 123 YDGRQAKENGLIDAFGYQEDALEALKKEKDLKDATVIQYDAPES---FSSLFSVAAQKMS 179 Query: 273 EDTIPLMKQTKVQGLW 288 + + K+ G Sbjct: 180 GQNADITQLIKLTGTL 195 >gi|226330245|ref|ZP_03805763.1| hypothetical protein PROPEN_04158 [Proteus penneri ATCC 35198] gi|225201040|gb|EEG83394.1| hypothetical protein PROPEN_04158 [Proteus penneri ATCC 35198] Length = 286 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 10/204 (4%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + + G ++ + E I I +++ + +++ L SPGG + Sbjct: 37 KPCLYVLDFNGSMDAHEVGALREEISAILSVAQAND--EVLLRLESPGGMVHGYGLAAAQ 94 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K + + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P + L K Sbjct: 95 LTRLKEKGIKLTAVVDKVAASGGYMMACVADKIVAAPFAIIGSIGVVAQIPNIHRLLKKN 154 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + K + E + + + ++ ++ F V + R P ++ Sbjct: 155 DIDVELHTAGEYKRTLTLLGENTEEGREKFKQDLNETHLLFKSFVHKYR--PQLDIDSVA 212 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEE 232 G W G+EA GLID VG ++ Sbjct: 213 TGEYWYGSEALNRGLIDEVGVSDD 236 >gi|322371200|ref|ZP_08045752.1| signal peptide peptidase SppA, 36K type [Haladaptatus paucihalophilus DX253] gi|320549190|gb|EFW90852.1| signal peptide peptidase SppA, 36K type [Haladaptatus paucihalophilus DX253] Length = 341 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 122/247 (49%), Gaps = 18/247 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA +A+ G I + +++ +I+R + D++A L++ L++PGG E Sbjct: 74 VAEVAVEGPIRRDGGGSIPSPAGTSTDDIVTQIDRANDDENANGLLLRLNTPGGEVVPSE 133 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I A ++ P + ++ AS GY I+ + + A E SLVGSIGV+ Sbjct: 134 DIRLAAERF--DGPTVAYATDVCASGGYWIASGCDELFAREASLVGSIGVIGSRVNAAEL 191 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +++G+S + + + K P E++ +Q ++D Y FV V+ R++ + Sbjct: 192 AERVGLSYERLAAGKYKDAGIPLKELDGDERDYLQGIIDGMYDDFVERVTTGRDLDPETV 251 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQ-SIRKIKDWNPPKNYWFCD 262 ++ R++ G +A+++GL+D +G +E+V L LGV + S+R+ + P + Sbjct: 252 RE-TEARVYLGDDAERIGLVDELGTREDVEARLAERLGVPEVSVREFEPSQPLRRRLNLG 310 Query: 263 LKNLSIS 269 + ++ S Sbjct: 311 ARGIAYS 317 >gi|240948297|ref|ZP_04752683.1| putative periplasmic protease [Actinobacillus minor NM305] gi|240297336|gb|EER47877.1| putative periplasmic protease [Actinobacillus minor NM305] Length = 350 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 37 HVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + G + ++ I + I++ + +++ L SPGG + +Q Sbjct: 104 RLFVLDFNGDVHANAVNALRKEITALLSIAKPND--EVLLKLESPGGVVHGYGLAASQLQ 161 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K + P+ V ++AAS GY+++C ++ I++A +++GSIGV+ Q P + L K + Sbjct: 162 RLKAKNIPLTVAVDKVAASGGYMMACVADKIISAPFAVIGSIGVVAQVPNIHRLLKKHDI 221 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + E K Q Q ++ ++ F + V++ R P ++ G Sbjct: 222 DVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHDLFKQFVTQHR--PQLDIEKIATG 279 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF--CDLKNLSI 268 W G +A + L+D + +++ D+ I ++K + KN S+ Sbjct: 280 EHWFGQQALALNLVDEIATSDDLLVKAVE---DKEIIELK-YKEKKNLTQRIGLQMEQSV 335 Query: 269 SSLLEDTI 276 SLL + Sbjct: 336 ESLLGKML 343 >gi|54309644|ref|YP_130664.1| putative periplasmic protease [Photobacterium profundum SS9] gi|46914082|emb|CAG20862.1| putative sohB protein, peptidase U7 family [Photobacterium profundum SS9] Length = 353 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 8/205 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRAI 90 + I G I D++E+ E +S + +++ L + GG + + Sbjct: 104 ESRLFVIDFHGSI-DAREVSSLREEVSAIIAVAIEGDEVLLRLETGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ + V ++AAS GY+++C ++ I++A ++VGSIGV+ Q P L K Sbjct: 163 DRLKSAGIKLTISVDKVAASGGYMMACVADKIISAPFAIVGSIGVIAQLPNFSKVLKKHD 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA Q ++ ++ F ++ R P ++ Sbjct: 223 IEFEQITAGEFKRTLTMFGENTDKARDKFQVEIEETHGLFKDFIAIHR--PELDLEKVAT 280 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVW 234 G W G +A +GL+D +G ++ Sbjct: 281 GEHWFGNQALNLGLVDEIGTSDDFI 305 >gi|55377494|ref|YP_135344.1| signal peptide peptidase SppA [Haloarcula marismortui ATCC 43049] gi|55230219|gb|AAV45638.1| putative signal peptide peptidase SppA [Haloarcula marismortui ATCC 43049] Length = 331 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 22/267 (8%) Query: 37 HVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +VA +A+ G I + +++E+IER D + AL++ L++PGG Sbjct: 67 NVAEVAVEGPISRDGGGGITSPPVGASADDIVEQIERADSDRGSEALLLKLNTPGGEIVP 126 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E I I + P I ++ AS GY I+ + + A E S+VGSIGV+ K Sbjct: 127 SEDIR--IAAEQFDGPTIAYATDVCASGGYDIAAGCDELWAREGSIVGSIGVVGSRVNAK 184 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 D++G+S + + K P E+ + +Q +VD Y F+ V+E R + + Sbjct: 185 ELADRVGLSYEQFTAGEYKDAGVPLKEMTADEREYLQSIVDDYYDQFIDTVAEGREMDAE 244 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFC 261 ++ RI+ G EA++ GL+D +G +++V SL LG D + IK++ P + Sbjct: 245 ALKD-TEARIFLGDEAEERGLVDRLGTRDDVEASLEQRLGEDVT---IKEYEPERGLTGK 300 Query: 262 DLKNL-SISSLLEDTIPLMKQTKVQGL 287 ++ L I + ++GL Sbjct: 301 LRGGAQQVAFALGAGIAGVADGDIEGL 327 >gi|311694689|gb|ADP97562.1| sohB protein, peptidase U7 family [marine bacterium HP15] Length = 353 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 13/254 (5%) Query: 28 SSHVEDNSPHVARIAIRGQI--EDSQELIERIERIS--RDDSATALIVSLSSPGGSAYAG 83 + +D+ V + G I D+ L I + D +++ L S GG ++ Sbjct: 95 TDEQDDSRGRVYVLDFDGDIKASDTDPLRRAITAVLSIADPEKDEVVIRLESGGGLVHSY 154 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++++ + V ++AAS GY+++C ++ IVA+ +++GSIGV+ Q P Sbjct: 155 GLAAAQLDRIRSKGLRLTACVDKVAASGGYMMACVADRIVASPFAILGSIGVVAQLPNFH 214 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL K V + + + K + F E K Q + ++ ++ F VSE R P Sbjct: 215 RFLKKNDVDFEVLTAGEHKRTMTIFGENTDKGRQKFLEDLEDTHGLFKEYVSERR--PDL 272 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 +++G IW G A +V LID + +E S+ + P+ Sbjct: 273 DIAAVANGDIWFGKRALEVKLIDEIKTSDEYLIEACDRADVVSVAYQRKRTLPEK----- 327 Query: 263 LKNLSISSLLEDTI 276 L+ SS LE T+ Sbjct: 328 -LGLATSSALEHTV 340 >gi|15639981|ref|NP_219434.1| protease IV (sppA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189026220|ref|YP_001933992.1| protease IV [Treponema pallidum subsp. pallidum SS14] gi|3323323|gb|AAC26585.1| protease IV (sppA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018795|gb|ACD71413.1| protease IV [Treponema pallidum subsp. pallidum SS14] Length = 598 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%) Query: 35 SPHVARIAIRGQIED----------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 V I + G I S E+ ++ D A+++ + S GG +A E Sbjct: 316 QDQVGIIHLAGPIAAHRDTELGGTISDEVSALLDVAMSDPDIKAVVLRIDSGGGEVFASE 375 Query: 85 AIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I RA+ + K +KPVI + +AAS Y ++ A++ I A+ ++ GSIGVL P + Sbjct: 376 RIRRALARAKRRGKKPVIVSMGAIAASGAYWVASAADYIFASPYTITGSIGVLSVLPTFE 435 Query: 143 PFLDKL-GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL++ G+++ SV+ + +PS + MQ V ++Y F+ +VS RN+ Sbjct: 436 TFLERYAGITVDSVQVHGV-RQPSLLRSGTAEDTARMQLDVMATYRTFLSVVSAGRNLTL 494 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D+ +++GRI+ G +A +GL+D +GG +E Sbjct: 495 DRVAAVAEGRIYAGEDAVSLGLVDALGGLDEAVAHAAK 532 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 26/229 (11%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAAS 109 ++ + + + D ++ L + G ++ + A+ + K +KP+ + Sbjct: 90 DITQALRNAATDRRIESVFFDLSNMSGWTSGHFVEMESALSEYKKSKKPLYVFSTSYSL- 148 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A Y I+ ++ I+ GS+ G + + +K+GV V + K Sbjct: 149 ADYYIASFADEIILDPM---GSVDLSGFYTETLFYXGMEEKIGVRWNXVHAGVYKGMAEI 205 Query: 167 FS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTG---A 216 FS + +P+ + Q V + ++ VS +R + +D R+ + G Sbjct: 206 FSRKDFSPEVRRNYQSVFARLWQQYLSDVSRNRALEVQHLARYADRRLELLQKYNGDGAR 265 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 A L+ V +E +L L D D+ KN+ D N Sbjct: 266 TALAEKLVTRVCSYDEAGVALKFLKED-------DYESAKNFVGLDDYN 307 >gi|291060353|gb|ADD73088.1| signal peptide peptidase SppA, 67K type [Treponema pallidum subsp. pallidum str. Chicago] Length = 598 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%) Query: 35 SPHVARIAIRGQIED----------SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 V I + G I S E+ ++ D A+++ + S GG +A E Sbjct: 316 QDQVGIIHLAGPIAAHRDTELGGTISDEVSALLDVAMSDPDIKAVVLRIDSGGGEVFASE 375 Query: 85 AIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I RA+ + K +KPVI + +AAS Y ++ A++ I A+ ++ GSIGVL P + Sbjct: 376 RIRRALARAKRRGKKPVIVSMGAIAASGAYWVASAADYIFASPYTITGSIGVLSVLPTFE 435 Query: 143 PFLDKL-GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL++ G+++ SV+ + +PS + MQ V ++Y F+ +VS RN+ Sbjct: 436 TFLERYAGITVDSVQVHGV-RQPSLLRSGTAEDTARMQLDVMATYRTFLSVVSAGRNLTL 494 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D+ +++GRI+ G +A +GL+D +GG +E Sbjct: 495 DRVAAVAEGRIYAGEDAVSLGLVDALGGLDEAVAHAAK 532 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 26/229 (11%) Query: 52 ELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAAS 109 ++ + + + D ++ L + G ++ + A+ + K +KP+ + Sbjct: 90 DITQALRNAATDRRIESVFFDLSNMSGWTSGHFVEMESALSEYKKSKKPLYVFSTSYSL- 148 Query: 110 AGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A Y I+ ++ I+ GS+ G + + +K+GV V + K Sbjct: 149 ADYYIASFADEIILDPM---GSVDLSGFYTETLFYGGMEEKIGVRWNVVHAGVYKGMAEI 205 Query: 167 FS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTG---A 216 FS + +P+ + Q V + ++ VS +R + +D R+ + G Sbjct: 206 FSRKDFSPEVRRNYQSVFARLWQQYLSDVSRNRALEVQHLARYADRRLELLQKYNGDGAR 265 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 A L+ V +E +L L D D+ KN+ D N Sbjct: 266 TALAEKLVTRVCSYDEAGVALKFLKED-------DYESAKNFVGLDDYN 307 >gi|260549707|ref|ZP_05823924.1| periplasmic serine protease [Acinetobacter sp. RUH2624] gi|260407224|gb|EEX00700.1| periplasmic serine protease [Acinetobacter sp. RUH2624] Length = 320 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 17/262 (6%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEAI 86 N+ + + +G I+ S + L E I I +A A ++V L SPGG + Sbjct: 54 KNNQKIFVLDFKGDIQASAVENLREEITLILA--TAKAGRDRVVVRLESPGGMVHGYGLA 111 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++++ + V ++AAS GY+++C +N I++A ++VGSIGV+ Q P L Sbjct: 112 AAQLVRLRDAGFLLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLL 171 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + V + + K + F E P+ ++ + ++ F V + R P Sbjct: 172 KEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHILFKHFVEKYR--PQLNVD 229 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G +A + L+D + +E +L + N K + Sbjct: 230 KVATGEHWYGQDALDLNLVDKLQTSDEYLLALL------PQHDVYVINTRKKATLGEKLG 283 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + L Sbjct: 284 LQAAQMADSLIPAVMHKVADTL 305 >gi|39934118|ref|NP_946394.1| peptidase S49 [Rhodopseudomonas palustris CGA009] gi|39647966|emb|CAE26486.1| possible protease SohB [Rhodopseudomonas palustris CGA009] Length = 300 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 19/270 (7%) Query: 36 PHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V + + G I L + ++R +A A+ ++++SPGGS I Sbjct: 31 PVVPVVRLSGTIGAVTPLRPGLTLAGVAKLLDRAFSTRNAKAVALAINSPGGSPVQSRLI 90 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + K PV V ++AAS GY+I+CA++ I +S++GSIGV+ + Sbjct: 91 YLRIRALAAEKKLPVYAFVEDVAASGGYMIACAADEIYCDPSSILGSIGVVGGGFGFQEL 150 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 + K+GV + + KA+ PF +P+ V ++ + + F+ LV ESR + Sbjct: 151 IRKIGVERRLYTAGERKAQLDPFLPEDPQEVARLKVLQQEIHALFIALVKESRGTRLKGE 210 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G W GA + +GL D +G V + + V + +PP Sbjct: 211 ESKLFTGEYWAGATSVSLGLADSIGDLRAVLRGKFGDKVRTPL-----ISPPTGLLANLS 265 Query: 264 KNLSISSLLEDTIPLMKQTKVQGL--WAVW 291 + S + D + + ++ + L A+W Sbjct: 266 RKSSGAGASLDGVAALPESMITALETRAIW 295 >gi|206578027|ref|YP_002238995.1| peptidase, S49 (protease IV) family [Klebsiella pneumoniae 342] gi|290512950|ref|ZP_06552314.1| serine protease SohB [Klebsiella sp. 1_1_55] gi|206567085|gb|ACI08861.1| peptidase, S49 (protease IV) family [Klebsiella pneumoniae 342] gi|289774563|gb|EFD82567.1| serine protease SohB [Klebsiella sp. 1_1_55] Length = 348 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 12/214 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + P + +G ++ + E+ + D +++ L SPGG + Sbjct: 97 EGKPRAWVLDFKGSMDAHEVNSLREEITAVLAAAKARDQ---VVIRLESPGGVVHGYGLA 153 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q++++++ P+ V ++AAS GY+++C +N IV+A +++GSIGV+ Q P + FL Sbjct: 154 ASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFAILGSIGVVAQIPNLHRFL 213 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + I+ + K + E + + ++ ++ ++H F V R P Sbjct: 214 KNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHHLFKDFVHRMR--PGLDIE 271 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D V +E+ L Sbjct: 272 QVATGEHWYGVQALEKGLVDAVETSDELLLGLME 305 >gi|192289645|ref|YP_001990250.1| peptidase S49 [Rhodopseudomonas palustris TIE-1] gi|192283394|gb|ACE99774.1| peptidase S49 [Rhodopseudomonas palustris TIE-1] Length = 300 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 19/270 (7%) Query: 36 PHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V + + G I L + ++R +A A+ ++++SPGGS I Sbjct: 31 PVVPVVRLSGTIGAVTPLRPGLTLAGVAKLLDRAFSTRNAKAVALAINSPGGSPVQSRLI 90 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + K PV V ++AAS GY+I+CA++ I +S++GSIGV+ + Sbjct: 91 YLRIRALAAEKKLPVYAFVEDVAASGGYMIACAADEIYCDPSSILGSIGVVGGGFGFQEL 150 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 + K+GV + + KA+ PF +P+ V ++ + + F+ LV ESR + Sbjct: 151 IRKIGVERRLYTAGERKAQLDPFLPEDPQEVARLKVLQQEIHALFIALVKESRGTRLKGE 210 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 L G W GA + +GL D +G V + + V + +PP Sbjct: 211 ESKLFTGEYWAGATSVSLGLADSIGDLRAVLRGKFGDKVRTPL-----ISPPTGLLANLS 265 Query: 264 KNLSISSLLEDTIPLMKQTKVQGL--WAVW 291 + S + D + + ++ + L A+W Sbjct: 266 RKSSGAGASLDGVAALPESMITALETRAIW 295 >gi|145637711|ref|ZP_01793364.1| predicted inner membrane peptidase [Haemophilus influenzae PittHH] gi|145269113|gb|EDK09063.1| predicted inner membrane peptidase [Haemophilus influenzae PittHH] Length = 323 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I S +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|150402249|ref|YP_001329543.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C7] gi|150033279|gb|ABR65392.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C7] Length = 307 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 129/243 (53%), Gaps = 14/243 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------QELIERIE 58 V L ++ V + +S ++A I I G I + IE I+ Sbjct: 11 VFLVIILFLVGFILLLPGDGISSKNIALINIDGTITSQTSETGLFSEFEPSVNDYIEWID 70 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +D + A+I+ ++SPGG A E + R I++ K V+ + M SA Y + ++ Sbjct: 71 DAEKDSNIKAIIIKINSPGGEVIASEKLSRKIKEASEEKVVVAYIETMGTSAAYQAASST 130 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + I+A + +LVG+IGV + + ++KLG+++ ++KS K SP + + +M+ Sbjct: 131 DYILAEKQALVGNIGVRMEILHYYGLMEKLGINVTTIKSGTYKDIMSPTRPMTEEEQKMI 190 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + +VD SY+ FV V+E+RN+ ++TL ++DG+I++G +A+KVGL+D+ G + + Sbjct: 191 ESIVDESYYEFVSWVAENRNMTINETLEVADGKIYSGIQAEKVGLVDMTGTEGDAIDIAS 250 Query: 239 ALG 241 + Sbjct: 251 KMA 253 >gi|302035495|ref|YP_003795817.1| putative phage minor capsid protein C [Candidatus Nitrospira defluvii] gi|300603559|emb|CBK39889.1| putative Phage minor capsid protein C [Candidatus Nitrospira defluvii] Length = 404 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 14/216 (6%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +A + I G + Q++ +I+ D + A+++ + SPGG + Sbjct: 55 GGSIAVLPIYGTLVRRTVGLEAASGLTSYQDIAAQIDTAIADPAVAAIVLDIDSPGGESG 114 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++ KPV ++MA SA Y I A++ T VGSIGV+ + Sbjct: 115 GVFDLADRVRAAAQVKPVWALANDMAYSAAYAIGSAASRFFVTRTGGVGSIGVIAMHADQ 174 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + GV +V + K + +P ++ +A ++ VD Y FV V+ R++ Sbjct: 175 SVRDAQDGVRYTTVFAGARKNDLNPHEPISDEAHAFLKSEVDRIYGLFVDTVASHRSLSS 234 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++ ++ G +A GL D VG ++V L Sbjct: 235 EAVRA-TEAGVFFGNDAVAAGLADAVGNFDDVLNEL 269 >gi|331006608|ref|ZP_08329895.1| SohB protein, peptidase U7 family [gamma proteobacterium IMCC1989] gi|330419592|gb|EGG93971.1| SohB protein, peptidase U7 family [gamma proteobacterium IMCC1989] Length = 359 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 14/237 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYA 82 S+ N V + G I+ S +E + I ++R++ +++ L S GG ++ Sbjct: 102 SNADNKNKKRVYIVDFDGDIKASAVDNLREEVTAILSLAREED--EVVIRLESAGGMVHS 159 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + +VK++K P+ V ++AAS GY+++C ++ I AA +++GSIGV+ Q P Sbjct: 160 YGLASSQLARVKDKKIPLTVCVDKVAASGGYMMACVADTICAAPFAILGSIGVVAQLPNF 219 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K V + + K + F E K + + +++++ F V E R P Sbjct: 220 HRLLKKNDVDFELFTAGEYKRTLTMFGENTDKGREKFTEDLETTHELFKDFVREQR--PV 277 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 ++ G IW G++AK+ L+D + ++ S VDQ+ + K++ Sbjct: 278 VDIDKVATGEIWFGSQAKEQQLVDRLTTSDDYIVS----QVDQADVYHVQYTTKKSF 330 >gi|119469274|ref|ZP_01612213.1| predicted inner membrane peptidase [Alteromonadales bacterium TW-7] gi|119447138|gb|EAW28407.1| predicted inner membrane peptidase [Alteromonadales bacterium TW-7] Length = 313 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 7/217 (3%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERIS--RDDSATALIVSLSSPGGSA 80 S E + P + + G ++ + + L E I I D +++ L S GG Sbjct: 53 LDKKSDKEGSKPRLYVVDFIGSMDAHEVESLREEITAIISIADPKKDKVLIRLESGGGVV 112 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q++K+ P+ + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 113 HGYGLAASQLQRIKSAGIPLSVSIDKVAASGGYMMACVADEILAAPFAIVGSIGVIAQIP 172 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L K V + + + K + F E KA + +D ++ ++ F VS R Sbjct: 173 NFNKILKKNDVEFEQITAGEFKRTLTLFGENTDKAREKFRDEIEQTHDLFKTFVSSQR-- 230 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 P ++ G W +A + GL+DV+ ++ Sbjct: 231 PSLNIDQVATGEHWFATQAIEKGLVDVIKTSDDALLE 267 >gi|308050237|ref|YP_003913803.1| inner membrane peptidase [Ferrimonas balearica DSM 9799] gi|307632427|gb|ADN76729.1| inner membrane peptidase [Ferrimonas balearica DSM 9799] Length = 338 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 104/239 (43%), Gaps = 18/239 (7%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 + S ++ + I + I+ +Q E+ + D ++V + S GG Sbjct: 83 AKESKGKEREGRLFLIDFKAGIDAAQVAQLREEITAVLTVAEARDE---VLVRVESGGGM 139 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A + +++ K P+ V ++AAS GY+++C + I++A ++VGSIGV+ Q Sbjct: 140 VHAYGLAASQLDRIRQAKIPLTIAVDKVAASGGYMMACVGDKILSAPFAIVGSIGVIAQL 199 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P L K + + + K + F E N ++ ++ ++ F V R Sbjct: 200 PNFNKVLKKHDIEFEQHTAGDFKRTLTMFGENNEAGRDKFREELEETHLLFKEFVQRYR- 258 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 P ++ G W G +A ++GL+D + ++ + D+ I ++ + KN Sbjct: 259 -PELDLDKVATGEHWFGLQALELGLVDAIQTSDDYL-----MAQDKEILQL-QYEEKKN 310 >gi|326570109|gb|EGE20154.1| putative periplasmic protease [Moraxella catarrhalis BC8] Length = 325 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYA 82 S+ + + G I+ S +E I I ++ +++ L S GG +A Sbjct: 62 STDDHTQKAAIYVLDFDGDIKASAVAHLREEISAIISVAN--RGDEVVLRLESGGGQVHA 119 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K + V ++AAS GY+++C ++ I+A++ +++GSIGV+ Q P Sbjct: 120 YGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTADKIIASDFAVIGSIGVVSQLPNF 179 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL K V + + K + F E + + Q ++ + F + + R P Sbjct: 180 HEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKHQADIERIHELFKGFIHKYR--PQ 237 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G +W G +A ++GLID +G + Sbjct: 238 LDLERVATGEVWFGEDALELGLIDEIGTSDAYL 270 >gi|254420657|ref|ZP_05034381.1| signal peptide peptidase SppA, 67K type [Brevundimonas sp. BAL3] gi|196186834|gb|EDX81810.1| signal peptide peptidase SppA, 67K type [Brevundimonas sp. BAL3] Length = 592 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 103/279 (36%), Gaps = 19/279 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED---------------SQELIERIERISRDDSATALI 70 +A + G I S + E I D A++ Sbjct: 285 DKGERTGSGKNAIAIVGGEGAIVTGRSDGGGFGGGSSIHSDDTAEAIYDAIEDKGVKAIV 344 Query: 71 VSLSSPGGSAYAGEAI-FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 +SSPGGS A E I KPV+ + AAS GY IS ++ IVA ++L Sbjct: 345 FRVSSPGGSPEASEQILAAVRAAKAAGKPVVVSMGAYAASGGYWISSEADWIVAQPSTLT 404 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSS-PMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV + L + GV ++ + P SP +D Y Sbjct: 405 GSIGVFGGKFVIADALGRFGVDMRELTVGGPYADAFSPTQSFTNSQRAAFAGSMDRIYDD 464 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ--SI 246 F+ V+ R + + ++ GR+WTGA+A +GL+D +GG E AL Sbjct: 465 FITRVATGRKLEPARVREIAKGRVWTGAQALPLGLVDQLGGLTEAVAKAKALAKIPAGES 524 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 + K + K+ W + + S + ++ Sbjct: 525 VRFKHFPKSKSPWEALSEMFGVQSEAAQALVMLGGVMAD 563 Score = 95.6 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 95/275 (34%), Gaps = 26/275 (9%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIR------------------GQIED 49 + + ++ + ++ + + + +P + + + G Sbjct: 12 FTGLILFVVVIPVVLLTVAIAGSSKPTAPATSVLELDLREGVSDQPSTNPFAAFGGSGLS 71 Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAA 108 ++++ + + D S AL++ L G + + + +A+++ + KPVI A Sbjct: 72 VTQVVDGLAQAEEDKSVKALLIRLPESGMTPATADELRQAVRRFRASGKPVIAHSQGFAP 131 Query: 109 SAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 Y++ +++ + T+ + G ++ +K GV + K Sbjct: 132 MGAVMSTYMVGASASELWMQNTAGFQATGFSADSVFLGRAFEKYGVRADFEQRYEYKNAV 191 Query: 165 SPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + ++ + + M + S Y + ++ R + + ++ +A Sbjct: 192 NEYTQSDYTGPHREAMTAWMTSLYDSALANAAQDRKTTPAALKTVIEAGPYSAEQALANK 251 Query: 223 LIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPK 256 LID +G EE + G I + + K Sbjct: 252 LIDKIGQVEEAEAEIKRRAGKGAEIVEFDQYTSDK 286 >gi|163795884|ref|ZP_02189848.1| dihydropyrimidinase [alpha proteobacterium BAL199] gi|159178917|gb|EDP63453.1| dihydropyrimidinase [alpha proteobacterium BAL199] Length = 583 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 17/244 (6%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALI 70 Y + + + VA I + G I+ S ++ E ++ + D + A+I Sbjct: 280 YLAQAGRPNADGTRVALIHLDGTIDRGEGGGLSGRGSVGSAQITETVDEVLADKAVRAVI 339 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + +SSPGGS A + + I +++ PVI +AAS GY + ++ I+A +L Sbjct: 340 LRISSPGGSYVASDTMRHDIGRLRAAGLPVIASFANIAASGGYFAALPADHIIAHPATLT 399 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIG + LDKL V+I V+ S Q ++ ++D Y F Sbjct: 400 GSIGAVGGKVSGSGLLDKLEVAIDRVEVGRNAGMFSSTRPFTSDQRQHLRRMLDDIYADF 459 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ---SLYALGVDQSI 246 V E+R + + ++ GRIWTG +A++VGL+D +GG E Q L D I Sbjct: 460 AGKVGEARRLSPGEIDAVARGRIWTGEDAQRVGLVDGLGGYAEAMQLTRQTIGLTPDAPI 519 Query: 247 RKIK 250 +I+ Sbjct: 520 ERIR 523 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 12/204 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGG---SAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 +L++ +++ + D T I LS G + + A+ + + K ++ Sbjct: 77 DLVDILDQATGDRRVTGAIFDLS---GAQIGLAQTQELRAAVFRFRAAGKTIVAFADSYE 133 Query: 108 ASA--GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 Y ++ A + I + L+ G+ + P + LD++G+ + + K + Sbjct: 134 GDGVGPYYLASAFDRIWMQPSGLLVLTGISMEVPLARNLLDEVGLLPEFEQRFEFKGAMA 193 Query: 166 PFSEVN--PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 +E + V +S Y V ++ +R + L D EA+ GL Sbjct: 194 TLTETTMPAAVRDNLARVANSLYGQVVSGIASTRRLGGTTVSALIDRGPLLAGEARGNGL 253 Query: 224 IDVVGGQEEVWQSLYALGVDQSIR 247 +D +G + + S+ L +D + Sbjct: 254 VDALGYRSDAEASI-GLTIDNHVT 276 >gi|319638866|ref|ZP_07993624.1| protease [Neisseria mucosa C102] gi|317399770|gb|EFV80433.1| protease [Neisseria mucosa C102] Length = 331 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 10/273 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 + LSL+ ++ V+ S H A I + G+I + Q L + +E + +A Sbjct: 57 LIFLSLIFGLAEEEGKTTSVQARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNA 116 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 117 KAIIIRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYA 176 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 177 DPSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWESMLG 236 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + GRI+TG EAK+VGLID G V + + Sbjct: 237 DIHQEFIKAVKLGRGARLKDKQYPDVFSGRIYTGKEAKQVGLIDDFGSIYSVARDVVKAP 296 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + D++ + F + L + Sbjct: 297 ELVNYTPQDDFSKMLSRRFGAEVKAKVKETLSE 329 >gi|269102960|ref|ZP_06155657.1| putative sohB protein peptidase U7 family [Photobacterium damselae subsp. damselae CIP 102761] gi|268162858|gb|EEZ41354.1| putative sohB protein peptidase U7 family [Photobacterium damselae subsp. damselae CIP 102761] Length = 336 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 102/226 (45%), Gaps = 14/226 (6%) Query: 33 DNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I +G I+ + + + I ++++ +++ L + GG + Sbjct: 85 SRDSRLFVIDFKGGIDAREVSALRQEVTAILAVAQEGD--EVLLRLETGGGMVHDYGLAS 142 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++K + V ++AAS GY+++C ++ I++A ++VGSIGV+ Q P L Sbjct: 143 SQLDRLKAAGLKLTISVDKVAASGGYMMACVADKIISAPFAIVGSIGVIAQIPNFNKVLK 202 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + + K + F E KA + + ++ ++ F ++ R P Sbjct: 203 KNDIEFEQITAGEFKRTLTMFGENTDKAREKFKLEIEETHGLFKDFIANHR--PELDLNK 260 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEE----VWQSLYALGVDQSIRK 248 ++ G W G +A ++GL+D +G ++ + LGV RK Sbjct: 261 VATGEHWFGQQAFELGLVDAIGTSDDFITAACKERKVLGVKYVQRK 306 >gi|111225578|ref|YP_716372.1| endopeptidase IV [Frankia alni ACN14a] gi|111153110|emb|CAJ64857.1| Endopeptidase IV (Protease IV, signal peptide peptidase) [Frankia alni ACN14a] Length = 772 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 1/201 (0%) Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNI 120 RD+ A + ++SPGGS A + + R ++ + P++ + ++AAS GY +S A+++ Sbjct: 459 RDEDVAAAVFRVNSPGGSYVASDLVRREAERFRASGRPLVVSMGDVAASGGYFVSLAADL 518 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 IVA +L GSIGV V+ LDK+GV +V SP + +++ Sbjct: 519 IVANPGTLTGSIGVFAGKQVVRELLDKVGVGFGAVAEGEHALMMSPRRPFTVGEREKLEE 578 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 +D Y FV V+ +R + D+ L+ GR+WTGA+A GL+D +GG + + + Sbjct: 579 FLDRVYADFVDKVAAARRLTRDQVHELARGRVWTGADAHAYGLVDELGGLTDALRLAWTR 638 Query: 241 GVDQSIRKIKDWNPPKNYWFC 261 + P+ Sbjct: 639 AGLPEGETPRVRLAPRPSVLE 659 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 13/194 (6%) Query: 51 QELIERIERISRDDSATALIVSLSSPG--GSAYA-GEAIFRAIQKVKNRK-PVITEVHEM 106 ++L+E + + D + ++ + G G+ A + I AI + I Sbjct: 54 RDLVEALRYATEDPRVSVVVAHI---GAAGTPLARIQEIRAAIGDFRAAGGTAIAYADTF 110 Query: 107 AASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 G Y ++CA + I A + G G+ + P+++ LD+LGV+++ + K Sbjct: 111 GEFGGGTGPYYLACAFDEIWLAPSGDCGLTGLGMETPFLRGALDRLGVAVEIGQRYEYKN 170 Query: 163 EPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 + + P ++ + +++SS V +++ R +P D+ L D G+ A Sbjct: 171 AVNTLVERDFTPAHLEAVSRIIESSSEQVVAGIAQGRRMPADRVRRLIDLGPLAGSVALD 230 Query: 221 VGLIDVVGGQEEVW 234 VGL+D +G ++EV+ Sbjct: 231 VGLVDRLGYRDEVY 244 >gi|238894328|ref|YP_002919062.1| putative periplasmic protease [Klebsiella pneumoniae NTUH-K2044] gi|238546644|dbj|BAH62995.1| putative peptidase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 348 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 12/220 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSA 80 + + P + +G ++ + E+ + D +++ L SPGG Sbjct: 91 LGNAEPEGKPRAWVLDFKGSMDAHEVNSLREEITAVLAAAKARDQ---VVIRLESPGGVV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q++++++ P+ V ++AAS GY+++C +N IV+A +++GSIGV+ Q P Sbjct: 148 HGYGLAASQLQRLRDKQIPLTVAVDKVAASGGYMMACVANKIVSAPFAILGSIGVVAQIP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + FL + I+ + K + E + + ++ ++ ++H F V R Sbjct: 208 NLHRFLKNKDIDIELHTAGQYKRTLTMLGENTEEGRRKFREDLNETHHLFKDFVHRMR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A + GL+D V +E+ L Sbjct: 266 PGLDIEQVATGEHWYGVQALEKGLVDAVETSDELLLGLIE 305 >gi|149203059|ref|ZP_01880030.1| peptidase S49 [Roseovarius sp. TM1035] gi|149143605|gb|EDM31641.1| peptidase S49 [Roseovarius sp. TM1035] Length = 262 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 9/219 (4%) Query: 33 DNSPHVARIAIRGQIE-------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P VA I + G I + + IE+ A+ + ++SPGGS Sbjct: 6 NRRPTVAVIRLAGMIGGGPRAALSDEAIGPVIEKAFARGKPVAVALVINSPGGSPVQSSL 65 Query: 86 IFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I I+++ K PV V ++AAS GY ++ A++ I +S++GSIGV+ Sbjct: 66 IAARIRRLAEEKKIPVHAFVEDVAASGGYWLAVAADDIWVDASSVLGSIGVISAGFGANE 125 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL + G+ + + K+ PF P+ V ++ +++ + F+ V R Sbjct: 126 FLARQGIERRIYTAGKSKSTLDPFMPEKPEDVTRLKSILEDIHAAFITHVKSRRGARLRD 185 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 L G W G+ + ++GL D + + LY V Sbjct: 186 DPDLFTGEFWLGSLSVELGLADGIAHLLPKLKELYGDKV 224 >gi|257465744|ref|ZP_05630115.1| putative periplasmic protease [Actinobacillus minor 202] gi|257451404|gb|EEV25447.1| putative periplasmic protease [Actinobacillus minor 202] Length = 350 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 37 HVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + G + ++ I + I++ + +++ L SPGG + +Q Sbjct: 104 RLFVLDFNGDVHANAVNALRKEITALLSIAKPND--EVLLKLESPGGVVHGYGLAASQLQ 161 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++K + P+ V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P + L K + Sbjct: 162 RLKAKNIPLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQVPNIHRLLKKHDI 221 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + E K Q Q ++ ++ F + V++ R P ++ G Sbjct: 222 DVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHDLFKQFVTQHR--PQLNIDKIATG 279 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF--CDLKNLSI 268 W G +A + L+D + +++ D+ I ++K + KN S+ Sbjct: 280 EHWFGQQALALNLVDEIATSDDLLVKAVE---DKEIIELK-YKEKKNLTQRIGLQMEQSV 335 Query: 269 SSLLEDTI 276 +LL + Sbjct: 336 ENLLGKIL 343 >gi|326559247|gb|EGE09678.1| putative periplasmic protease [Moraxella catarrhalis 46P47B1] gi|326560765|gb|EGE11132.1| putative periplasmic protease [Moraxella catarrhalis 103P14B1] gi|326569629|gb|EGE19681.1| putative periplasmic protease [Moraxella catarrhalis BC1] gi|326570847|gb|EGE20871.1| putative periplasmic protease [Moraxella catarrhalis BC7] gi|326574397|gb|EGE24339.1| putative periplasmic protease [Moraxella catarrhalis 101P30B1] gi|326576422|gb|EGE26331.1| putative periplasmic protease [Moraxella catarrhalis O35E] Length = 325 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYA 82 S+ + + G I+ S +E I I ++ +++ L S GG +A Sbjct: 62 STDDHTQKAAIYVLDFDGDIKASAVAHLREEISAIISVAN--RGDEVVLRLESGGGQVHA 119 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K + V ++AAS GY+++C ++ I+A++ +++GSIGV+ Q P Sbjct: 120 YGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTADKIIASDFAVIGSIGVVSQLPNF 179 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL K V + + K + F E + + Q ++ + F + + R P Sbjct: 180 HEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKHQADIERIHELFKGFIHKYR--PQ 237 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G +W G +A ++GLID +G + Sbjct: 238 LDLERVATGEVWFGEDALELGLIDEIGTSDAYL 270 >gi|146276161|ref|YP_001166320.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145554402|gb|ABP69015.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 461 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 1/212 (0%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 S V A I + + L +++ + D A+++ L SPGG A A+ Sbjct: 82 SIVGSLVNRGAWIGASSGLTSYEGLAKQLTDAAADPKVKAIMLDLDSPGGEATGMFALAA 141 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++V KPV+ V++MAASA Y I+ + IV + TS+VGSIGV+ + L Sbjct: 142 KVREVAAEKPVVAVVNDMAASAAYGIASQATEIVVSPTSIVGSIGVVLTHLDRSGELAAK 201 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ + + K + +PF ++ +Q V Y FV LV++ R + Sbjct: 202 GIKPTLIHAGAHKVDGNPFGPLSDAVRADLQAEVGQFYDQFVGLVAQGRGAKLSAAKARA 261 Query: 209 D-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + G EA GL D V E V SL + Sbjct: 262 TEARTFIGQEAIDRGLADRVSTFEAVLASLQS 293 >gi|83645325|ref|YP_433760.1| putative periplasmic protease [Hahella chejuensis KCTC 2396] gi|83633368|gb|ABC29335.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 345 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 10/212 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERI-----SRDDSATALIVSLSSPGGSAYAGEAI 86 E + V + G I+ S+ + + S ++V L SPGG + Sbjct: 94 EQDKSRVYVLDFDGDIKASE--VSALREAITAVLSLAKPEDEVVVRLESPGGMVHGYGLA 151 Query: 87 FRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +++++ R + V ++AAS GYL++C +N I+AA S++GSIGV+ Q P L Sbjct: 152 ASQLERIRQRGVNLTVCVDKVAASGGYLMACLANKIIAAPFSIIGSIGVVAQLPNFNRLL 211 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + ++ ++ F V+ R P Sbjct: 212 KKHDIDYEVLTAGEYKRTLTVFGENTEKGREKFMQDLEETHVLFKEFVATHR--PQVDID 269 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G +W GA AK + L+D + ++ Sbjct: 270 EVAKGEVWYGARAKDINLVDAIQTSDDYLAER 301 >gi|15602450|ref|NP_245522.1| putative periplasmic protease [Pasteurella multocida subsp. multocida str. Pm70] gi|12720854|gb|AAK02669.1| SohB [Pasteurella multocida subsp. multocida str. Pm70] Length = 353 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 113/240 (47%), Gaps = 15/240 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSA 80 +++ P + + +G I S +E+ I +D ++V L SPGG Sbjct: 95 GEDIADEHKPRLYVLQFKGDIAASATSALREEVSTIIGVAKPEDE---VLVRLESPGGMV 151 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + ++K + V ++AAS GY+++C ++ IVAA +++GS+GV+ Q P Sbjct: 152 HGYGLAASQLLRLKQHGIKLTVAVDKVAASGGYMMACVADTIVAAPFAILGSVGVVAQIP 211 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K V + + + K + E K Q Q ++ ++ F + V+++R Sbjct: 212 NIHRLLKKHDVDVDVMTAGEYKRTMTVLGENTEKGKQKFQQELEETHQLFKQFVTQNR-- 269 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 P ++ G W G +A + L+D + +++ L A+ ++++ +K ++ +++ Sbjct: 270 PQVNIEEIATGEHWFGQQALGLHLVDAISTSDDLI--LNAIKENKTVLSVK-YHVKQSFL 326 >gi|268589496|ref|ZP_06123717.1| peptidase, S49 family [Providencia rettgeri DSM 1131] gi|291315164|gb|EFE55617.1| peptidase, S49 family [Providencia rettgeri DSM 1131] Length = 348 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 8/226 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGE 84 P + + +G D++E+ E IS D +++ L SPGG + Sbjct: 93 GQTGVKKPCLYVLDFKGS-MDAREVASLREEISAILAVADQQDEVLLRLESPGGMVHGYG 151 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++K + P+ V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + Sbjct: 152 LAASQLLRIKEKNIPLTIAVDKVAASGGYMMACIADKIIAAPFAIIGSIGVVAQIPNIHR 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K V ++ + K + E + + + ++S++ F + V ++R P Sbjct: 212 LLKKHDVDVELHTAGEYKRTLTMLGENTEQGRKKFVEDLNSTHELFKQFVHQNR--PSLD 269 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ G W G++A GL+D +G ++ + SIR + Sbjct: 270 ISAVATGEYWYGSQALDKGLVDNIGVSDDFIINAIDTKEIVSIRYV 315 >gi|313668036|ref|YP_004048320.1| secreted protease [Neisseria lactamica ST-640] gi|313005498|emb|CBN86934.1| putative secreted protease [Neisseria lactamica 020-06] Length = 350 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGS 79 E P + + G + E+ + +D +++ L SPGG Sbjct: 93 GGGKSAETQKPRLFVLDFDGDLYARAVGALRNEITAVLSIARPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQLIEVK 316 >gi|312194538|ref|YP_004014599.1| peptidase S49 [Frankia sp. EuI1c] gi|311225874|gb|ADP78729.1| peptidase S49 [Frankia sp. EuI1c] Length = 827 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 1/219 (0%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVI 100 + G + + + ++D A + + SPGGS A + + R +++ + PVI Sbjct: 505 PVGGSVLAADAVCAAFRAAAKDPDIAAAVFRVDSPGGSYVASDLVRREVERFRATGRPVI 564 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + +AAS GY ++ A++ IVA ++L GSIGV + LDKLGV+I V Sbjct: 565 VSMGAVAASGGYFVALAADTIVANPSTLTGSIGVYGGKQVISGLLDKLGVAIGEVAQGEH 624 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 S +P + + +D Y FV V+ SR +P ++ L+ GR+WTGA+A + Sbjct: 625 ALMMSARRPFSPGERAKLDEFLDRVYADFVGKVATSRAMPLERADELARGRVWTGADAHR 684 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 GL+D +GG E + + R + P Sbjct: 685 HGLVDELGGLERSLRLAWTAAGLPGTRPSRIRLLPHRSL 723 Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 7/191 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV-ITEVHEMAAS 109 +E+++ + R + D L+ ++S G + I A+ + + I Sbjct: 54 REIVDGLRRAALDPRTRVLVAHVASCGMPIARVQEIRDAVGEFRAAGKFAIAYADTFGEF 113 Query: 110 AG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G Y ++CA + I A +G GV P+++ LD+LGV+ + K + Sbjct: 114 GGGTVPYYLACAFDQIWLAPPGDLGLTGVASHTPFLRDALDRLGVAAELGARHEYKNAVN 173 Query: 166 PF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 F + ++ VV+SS + + R +P D+ L D + A + GL Sbjct: 174 TFVERGFTAEHLEATTRVVESSADEIIAGIVAGRRLPADRVRRLVDAGPLSAQVALRTGL 233 Query: 224 IDVVGGQEEVW 234 +D +G ++EV+ Sbjct: 234 VDRLGYRDEVY 244 >gi|326559886|gb|EGE10286.1| putative periplasmic protease [Moraxella catarrhalis 7169] Length = 325 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYA 82 S+ + + G I+ S +E I I ++ +++ L S GG +A Sbjct: 62 STDDHTQKAAIYVLDFDGDIKASAVAHLREEISAIISVAN--RGDEVVLRLESGGGQVHA 119 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K + V ++AAS GY+++C ++ I+A++ +++GSIGV+ Q P Sbjct: 120 YGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTADKIIASDFAVIGSIGVVSQLPNF 179 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL K V + + K + F E + + Q ++ + F + + R P Sbjct: 180 HEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKHQADIERIHELFKGFIHKYR--PQ 237 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G +W G +A ++GLID +G + Sbjct: 238 LDLERVATGEVWFGEDALELGLIDEIGTSDAYL 270 >gi|296113403|ref|YP_003627341.1| S49 family peptidase [Moraxella catarrhalis RH4] gi|295921097|gb|ADG61448.1| S49 family peptidase [Moraxella catarrhalis RH4] gi|326566604|gb|EGE16747.1| putative periplasmic protease [Moraxella catarrhalis 12P80B1] gi|326576010|gb|EGE25933.1| putative periplasmic protease [Moraxella catarrhalis CO72] Length = 325 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYA 82 S+ + + G I+ S +E I I ++ +++ L S GG +A Sbjct: 62 STDDHTQKAAIYVLDFDGDIKASAVAHLREEISAIISVAN--RGDEVVLRLESGGGQVHA 119 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K + V ++AAS GY+++C ++ I+A++ +++GSIGV+ Q P Sbjct: 120 YGLAAAQLVRIKEAGLKLTICVDKIAASGGYMMACTADKIIASDFAVIGSIGVVSQLPNF 179 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 FL K V + + K + F E + + Q ++ + F + + R P Sbjct: 180 HEFLKKHDVQFEQFTAGEYKRTVTIFGENDDEDRAKHQADIERIHELFKGFIHKYR--PQ 237 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G +W G +A ++GLID +G + Sbjct: 238 LDLERVATGEVWFGEDALELGLIDEIGTSDAYL 270 >gi|183599262|ref|ZP_02960755.1| hypothetical protein PROSTU_02723 [Providencia stuartii ATCC 25827] gi|188021494|gb|EDU59534.1| hypothetical protein PROSTU_02723 [Providencia stuartii ATCC 25827] Length = 348 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 110/247 (44%), Gaps = 10/247 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSA 80 + + P + + +G ++ + E I I ++ D +++ L SPGG Sbjct: 90 AKAGQSTVKKPCLYVLDFKGSMDAREVGSLREEISAILAVAEQDD--EVLLRLESPGGMV 147 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + ++K + P+ V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P Sbjct: 148 HGYGLAASQLSRLKEKNIPLTIAVDKVAASGGYMMACIASKIVAAPFAIIGSIGVVAQVP 207 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K V ++ + K + E + + + ++ ++ F + V +R Sbjct: 208 NIHRLLKKHDVDVELHTAGEYKRTLTMLGENTEQGRKKFIEDLNETHELFKQFVHHNR-- 265 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 P ++ G W G +A GLID +G +++ S SIR + + + Sbjct: 266 PSLDIDAVATGEYWYGTQALDKGLIDQIGVSDDIIISAIETKEIISIRYTQGKKMLERFT 325 Query: 260 FCDLKNL 266 +N+ Sbjct: 326 GSMSENI 332 >gi|197121609|ref|YP_002133560.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] gi|196171458|gb|ACG72431.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter sp. K] Length = 834 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 19/233 (8%) Query: 38 VARIAIRGQIE---------------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + G I ++ + I R + D + A+++ + S GG A Sbjct: 544 IQVVRVEGIIARGRSRADPLGADGVAGAETIAAEIHRAADDAAVRAIVLRIESGGGDGLA 603 Query: 83 GEAIFRA-IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I+R ++ + KPVI + ++AAS GYL++ ++ I+A ++L GSIGV P + Sbjct: 604 SDLIWREAVRARRKGKPVIASMGDLAASGGYLVAVGADAILAERSTLTGSIGVFAAKPDL 663 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L KL + ++ + S P +++ + + Y FV V+E R + Sbjct: 664 SGLLAKLSIHPEAYQRGENARLVSVLKPWTPAERAVLEKQIGAFYRQFVARVAEGRRLTT 723 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKD 251 + ++ GR+WTG +A + L+D +G + + L D + ++ Sbjct: 724 AEVEAVAGGRVWTGQQALERKLVDRIGTLADAIRLARERIGLAPDDVVEVRRE 776 Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 19/200 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAA 108 L+ R+E D AL+V + GG + G E + + V+ RKPV+ + Sbjct: 327 TLVTRLEAARDDPEVGALLVRI---GGLSLGGGRVEELRALLAAVRARKPVLAYLEG--- 380 Query: 109 SAG---YLISCASNIIVAAETS--LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G Y ++ A+ I A + +V G+ +++ L +LG++ VK+ K+ Sbjct: 381 -GGTREYWLATAATAIAAPPGAPLIVN--GISTSQLFLRGGLARLGIAFDVVKAGAYKSA 437 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 P +P+A + + V+D + FV V+E+R +P ++ L D ++T EAK+ Sbjct: 438 AEPLVRDAPSPEAREATEAVLDDVFGRFVAQVAEARRLPPERVRALVDQGLFTAEEAKEA 497 Query: 222 GLIDVVGGQEEVWQSLYALG 241 GL+D V +E+ + A+ Sbjct: 498 GLVDAVAWPDELERWGRAVA 517 >gi|309378531|emb|CBX22884.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 350 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGS 79 E P + + G + E+ + +D +++ L SPGG Sbjct: 93 GGGKSAETQKPRLFVLDFDGDLYARAVGALRNEITAVLSIARPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQLIEVK 316 >gi|317509305|ref|ZP_07966925.1| peptidase family S49 [Segniliparus rugosus ATCC BAA-974] gi|316252361|gb|EFV11811.1| peptidase family S49 [Segniliparus rugosus ATCC BAA-974] Length = 311 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 29/285 (10%) Query: 27 WSSHVEDNSPHVARIAIRGQI-----------EDSQELIERIERISRDDSATALIVSLSS 75 SS + V+ + + G I ++Q L + R +A A+ + ++S Sbjct: 36 LSSRKKVGGKIVSVVRLDGVIRSGGGPFGRGALNAQNLEAPLAEAFRVPNAVAVALIINS 95 Query: 76 PGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 PGGS I I+++ K+ KPV+ ++AAS GY ++CA++ I + + +GSIG Sbjct: 96 PGGSPAQSALIGDRIRQLSAKHEKPVLAFCEDVAASGGYWLACAADEIFVSSGTAIGSIG 155 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ + ++KLG+ + + KA PF P+ + + + + F+ V Sbjct: 156 VVSSSFGLTDAIEKLGLERRVHTAGLNKARLDPFMPEKPEDIAWLTGIQTDIHKVFIDWV 215 Query: 194 SESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 E R L + +W G A ++G+ D VG V + I+ + Sbjct: 216 KERRGDKLSGTDEELFNADVWIGRRAVELGIADAVGSLRGVLAERFPDAKPYEIKPKQQI 275 Query: 253 NPPKNYWFCDLKNLSISSLLEDTI-----PLMKQTKVQGLWAVWN 292 L+ L +++ +ED + + + +W+ + Sbjct: 276 ----------LQRLGLAASVEDIALRVMEGAVSSVERRAMWSRFG 310 >gi|197285195|ref|YP_002151067.1| periplasmic protease [Proteus mirabilis HI4320] gi|227355620|ref|ZP_03840014.1| S49 family SohB endopeptidase [Proteus mirabilis ATCC 29906] gi|194682682|emb|CAR42830.1| probable protease [Proteus mirabilis HI4320] gi|227164227|gb|EEI49120.1| S49 family SohB endopeptidase [Proteus mirabilis ATCC 29906] Length = 348 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 13/228 (5%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + I +G ++ + E I I +++ +++ L SPGG + Sbjct: 99 KPCLYVIDFKGSMDAHEVGALREEISAILSVAQAGD--EVLLRLESPGGMVHGYGLAAAQ 156 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P + L K Sbjct: 157 LTRLKDKGIKLTAVVDKVAASGGYMMACVADKIVAAPFAIIGSIGVVAQIPNIHRLLKKN 216 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + K + E + + + ++ ++ F V + R P ++ Sbjct: 217 DIDVELHTAGEYKRTLTLLGENTDEGREKFKQDLNETHLLFKSFVHKYR--PELDIDSVA 274 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G W G +A GLID VG ++ L + D + ++ K Sbjct: 275 TGEYWYGTDAVDKGLIDEVGVSDD---WLISRINDFEVLSVQYILKKK 319 >gi|319776073|ref|YP_004138561.1| inner membrane peptidase [Haemophilus influenzae F3047] gi|319896882|ref|YP_004135077.1| inner membrane peptidase [Haemophilus influenzae F3031] gi|329123236|ref|ZP_08251804.1| protease SohB [Haemophilus aegyptius ATCC 11116] gi|317432386|emb|CBY80741.1| predicted inner membrane peptidase [Haemophilus influenzae F3031] gi|317450664|emb|CBY86884.1| predicted inner membrane peptidase [Haemophilus influenzae F3047] gi|327471445|gb|EGF16893.1| protease SohB [Haemophilus aegyptius ATCC 11116] Length = 353 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I S +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|145635462|ref|ZP_01791163.1| predicted inner membrane peptidase [Haemophilus influenzae PittAA] gi|145267336|gb|EDK07339.1| predicted inner membrane peptidase [Haemophilus influenzae PittAA] Length = 353 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKPKDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|301170437|emb|CBW30044.1| predicted inner membrane peptidase [Haemophilus influenzae 10810] Length = 353 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I S +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|260582614|ref|ZP_05850403.1| periplasmic serine protease [Haemophilus influenzae NT127] gi|260094286|gb|EEW78185.1| periplasmic serine protease [Haemophilus influenzae NT127] Length = 353 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I S +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|229847303|ref|ZP_04467405.1| putative periplasmic protease [Haemophilus influenzae 7P49H1] gi|229809728|gb|EEP45452.1| putative periplasmic protease [Haemophilus influenzae 7P49H1] Length = 353 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I S +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|71065760|ref|YP_264487.1| putative periplasmic protease [Psychrobacter arcticus 273-4] gi|71038745|gb|AAZ19053.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Psychrobacter arcticus 273-4] Length = 324 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 12/210 (5%) Query: 37 HVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + + G I+ + +E+ I ++ D ++V L S GG + + Sbjct: 67 QIFVLDFDGDIKATAVKHLREEISTLISTANKGDE---VVVRLESGGGVVHGYGLAAAQL 123 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P +L Sbjct: 124 ARLKDAGLKLTVCVDKVAASGGYMMACVADNIVAAPFAIIGSIGVVSQLPNFHKWLKNHD 183 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V + + K + F E + K Q+ ++ ++ F V+ R + ++ Sbjct: 184 VDYEMFTAGDYKRTVTVFGENDDKDRAKYQEELEQTHELFKHFVNRYRGM--LDVDKVAT 241 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G W G +A + L+D + + Sbjct: 242 GEHWYGEDALHLNLVDKLQTSDSYLLERME 271 >gi|261379532|ref|ZP_05984105.1| signal peptide peptidase SppA [Neisseria subflava NJ9703] gi|284797999|gb|EFC53346.1| signal peptide peptidase SppA [Neisseria subflava NJ9703] Length = 331 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 10/273 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 + LSL+ ++ ++ S H A I + G+I + Q L + +E + +A Sbjct: 57 LIFLSLIFGLAEEEGKTTSIQARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNA 116 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 117 KAIIIRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYA 176 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 177 DPSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLG 236 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + GRI+TG EAK+VGLID G V + + Sbjct: 237 DIHQEFIKAVKLGRGARLKDKQYPDIFSGRIYTGKEAKQVGLIDDFGSIYSVARDVVKAP 296 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + D++ + F + L + Sbjct: 297 ELVNYTPQDDFSKMLSRRFGAEVKAKVKETLSE 329 >gi|261400985|ref|ZP_05987110.1| peptidase, S49 family [Neisseria lactamica ATCC 23970] gi|269209100|gb|EEZ75555.1| peptidase, S49 family [Neisseria lactamica ATCC 23970] Length = 350 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGS 79 E P + + G + E+ + +D +++ L SPGG Sbjct: 93 GGGKSAETQKPRLFVLDFDGDLYARAVGALRNEITAVLSIARPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQLIEVK 316 >gi|114319494|ref|YP_741177.1| putative periplasmic protease [Alkalilimnicola ehrlichii MLHE-1] gi|114225888|gb|ABI55687.1| inner membrane peptidase [Alkalilimnicola ehrlichii MLHE-1] Length = 332 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 14/248 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + P V + G + S+ E + I ++R + A+++ L S GG+ Sbjct: 87 DPERPRVYVLDFVGDMRASRAQTLREEVTAILSMARAER-DAVLLRLDSQGGTVPGYGLA 145 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ + +AAS GYL++C ++ IVAA ++VGSIGV+ P FL Sbjct: 146 ASQLARLREAGIPLTVSIDRVAASGGYLMACVADRIVAAPFAVVGSIGVIGALPNFNRFL 205 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + + + + K S F E +A + + ++S + F + R P Sbjct: 206 RRHDIDFEQHTAGEWKRTLSLFGENTDEAREKFRQDLESVHRHFKGFIQRYR--PALDLD 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN--PPKNYWFCDL 263 ++ G W EA +GL+D +G ++ L D + +++ + P W Sbjct: 264 QVATGEYWLAEEALGLGLVDELGTSDD---WLLRRRDDHRLVQLRYRHREPFGQRWLKAA 320 Query: 264 KNLSISSL 271 + S L Sbjct: 321 QGALGSRL 328 >gi|66816573|ref|XP_642296.1| hypothetical protein DDB_G0278333 [Dictyostelium discoideum AX4] gi|60470359|gb|EAL68339.1| hypothetical protein DDB_G0278333 [Dictyostelium discoideum AX4] Length = 649 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 21/254 (8%) Query: 38 VARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I G I S L+ I + D A+++ ++S GGS A Sbjct: 324 IALINAEGTIHQGTSANKYNGGPSIGSDSLVLAIRSATLDKDVKAIVIRVNSGGGSYIAS 383 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + + I+ K K ++ + AS GY +C ++ IVA +L GSIGVL +K Sbjct: 384 DMVHHEIEASKKAGKKIVISMGTYCASGGYFFACNADKIVALGATLTGSIGVLTAKFNLK 443 Query: 143 PFLD-KLGVSIKSVK-----SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + K+ V ++ ++ S K + + +D Y F VS+ Sbjct: 444 GMWEEKVHVKFDALHLNPDGATDNSTYFSSLHNYTEKQLAEVNSYMDFIYEDFTSKVSKG 503 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R + D+ ++ GR+WTGA+A K+ L+D +GG +E + L S + PK Sbjct: 504 RRLTRDQVEEIARGRVWTGAQALKLSLVDKLGGLKEAIEVAKELVGIASNVQPHVVTYPK 563 Query: 257 NYWFCDLKNLSISS 270 L S ++ Sbjct: 564 ETVLSQLVASSANN 577 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 92/232 (39%), Gaps = 16/232 (6%) Query: 21 TVVYFSWSSHVEDNSPHVARIA--IRGQIEDSQELIERIERISRDDSATALIVSLSSPGG 78 T++ +++ ++ + ++ I + I + L++ IE+ + D LIV LS G Sbjct: 59 TILEIDFTNTIDTSDVDISPIEKLLDPNIISFRSLLDAIEKAANDKRVIGLIVRLS---G 115 Query: 79 ----SAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAG----YLISCASNIIVAAETSLV 129 S + AI K++ K + + Y ++ + + A + + Sbjct: 116 ENQFSLANIQEFRNAISFFKSKGKRTVAFTDSFCEAGSGIGRYYMASIFHDVYMAPSGTL 175 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYH 187 I + + ++K L+KL + ++ K S + + M + S Y Sbjct: 176 NLINTQYDFAFIKKTLEKLNIVPDTITRKEYKNALSGLVNEHLTEPEKESMNAIFKSLYE 235 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + +++ R++ ++ L + ++ +A L+D +EV+ + Y Sbjct: 236 QIIEDIAKDRSLTKERVNELFESGPFSSDKALVNKLVDSTLYGDEVYTTTYE 287 >gi|134045563|ref|YP_001097049.1| signal peptide peptidase SppA, 36K type [Methanococcus maripaludis C5] gi|132663188|gb|ABO34834.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Methanococcus maripaludis C5] Length = 307 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 129/243 (53%), Gaps = 14/243 (5%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--------------QELIERIE 58 V L ++ V + +S ++A I + G I + IE I+ Sbjct: 11 VFLIIILFLVGFILLIPVDGISSKNMAMINLDGTISSQTSESGFFSEFEPSVDDYIEWID 70 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 +D + A+I+ ++SPGG A E + R I++ K VI + M SA Y + ++ Sbjct: 71 DAEKDSNIKAIIIKINSPGGEVIASEKLSRKIKEASEEKVVIAYIETMGTSAAYQAASST 130 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + IVA +LVG+IGV + + ++KLGV+ ++KS K SP + + +M+ Sbjct: 131 DYIVAERQALVGNIGVRMEIIHYYGLMEKLGVNATTIKSGIYKDIGSPTRPMTEEEQRML 190 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + +VD SY+ FV V+E+RN+ ++TL ++DG+I++G +AK+VGL+D+ G +E+ + Sbjct: 191 ESIVDESYYEFVSWVAENRNMTINETLRVADGKIYSGVQAKRVGLVDMTGTEEDAIEVAA 250 Query: 239 ALG 241 + Sbjct: 251 KMA 253 >gi|261343650|ref|ZP_05971295.1| peptidase, S49 family [Providencia rustigianii DSM 4541] gi|282568033|gb|EFB73568.1| peptidase, S49 family [Providencia rustigianii DSM 4541] Length = 348 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 8/235 (3%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGE 84 P + + +G D++E+ E IS D +++ L SPGG + Sbjct: 93 GQSSVKKPCLYVLDFKGS-MDAREVSSLREEISAILAVADQQDEVLLRLESPGGLVHGYG 151 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++K + + V ++AAS GY+++C +N IVAA S++GSIGV+ Q P + Sbjct: 152 LAASQLMRLKEKNISLTIAVDKVAASGGYMMACIANKIVAAPFSIIGSIGVVAQVPNIHR 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K V ++ + K + E + + + ++S++ F V ++R P Sbjct: 212 LLKKHDVDVELHTAGEYKRTLTMLGENTEQGRKKFVEDLNSTHELFKDFVHQNR--PSLD 269 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 ++ G W G +A + GL+D +G +++ + S+R + + + Sbjct: 270 IAAVATGEYWYGTQALEKGLVDEIGVSDDLIINAIETKEIISVRYVLSKKMVERF 324 >gi|90412193|ref|ZP_01220199.1| putative sohB protein, peptidase U7 family protein [Photobacterium profundum 3TCK] gi|90326917|gb|EAS43302.1| putative sohB protein, peptidase U7 family protein [Photobacterium profundum 3TCK] Length = 353 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 8/205 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRAI 90 + I G I D++E+ E +S + +++ L + GG + + Sbjct: 104 ESRLFVIDFHGSI-DAREVSSLREEVSAIIAVAIEGDEVLLRLETGGGMVHGYGLASSQL 162 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ + V ++AAS GY+++C ++ I++A ++VGSIGV+ Q P L K Sbjct: 163 DRLKSAGIKLTISVDKVAASGGYMMACVADKIISAPFAIVGSIGVIAQLPNFSKVLKKND 222 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E KA Q ++ ++ F ++ R P ++ Sbjct: 223 IEFEQITAGEFKRTLTMFGENTDKARDKFQVEIEETHGLFKDFIAIHR--PELDLEKVAT 280 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVW 234 G W G +A +GL+D +G + Sbjct: 281 GEHWFGNQALNLGLVDEIGTSDNFI 305 >gi|52628202|gb|AAU26943.1| signal peptide peptidase SppA (protease IV) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 326 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + I G I+ +Q +E++ +S ++V L SPGG+ Sbjct: 89 RPVLYVIDFSGDIKATQ--VEQLRDEVTSVLSIAKPEDEVLVRLESPGGAVNGYGLAASQ 146 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K Sbjct: 147 LQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKN 206 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + F+E K + Q+ ++ + F V ++R ++ Sbjct: 207 NIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFREYVLKNR--SQLDIDKVA 264 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G W +A + L+D + +E A Sbjct: 265 TGEHWIAKDAFDLRLVDKLATSDEYLIEKMA 295 >gi|322513452|ref|ZP_08066564.1| protease SohB [Actinobacillus ureae ATCC 25976] gi|322120743|gb|EFX92624.1| protease SohB [Actinobacillus ureae ATCC 25976] Length = 350 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 100/215 (46%), Gaps = 12/215 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSA 80 E + + G ++ S +E+ + +D +++ L SPGG Sbjct: 93 GGEKTEAEKSRLFVLKFNGDVQASTVNALAKEISAVLSLAKAEDE---VLLKLESPGGVV 149 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q++++ P+ V ++AAS GY+++C +N IV+A +++GS+GV+ Q P Sbjct: 150 HGYGLAASQLQRLRDHNIPLTVAVDKVAASGGYMMACVANKIVSAPFAIIGSVGVVAQVP 209 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K + + + + K + E K Q Q ++ ++ F + V+++R Sbjct: 210 NIHRLLKKHDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHELFKQFVAQNR-- 267 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 P + ++ G W G +A + L+D + +++ Sbjct: 268 PQLEIEKIATGEHWFGKQALALNLVDEISTSDDLL 302 >gi|120554450|ref|YP_958801.1| putative periplasmic protease [Marinobacter aquaeolei VT8] gi|120324299|gb|ABM18614.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Marinobacter aquaeolei VT8] Length = 353 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 13/253 (5%) Query: 29 SHVEDNSPHVARIAIRGQI--EDSQELIERIERIS--RDDSATALIVSLSSPGGSAYAGE 84 E+ + V + G I D+ L + + + +++ L S GG +A Sbjct: 96 DATEEKTARVYVLDFDGDIKASDTDTLRRSVSAVLSVANPETDEVVIRLESGGGLVHAYG 155 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++++ + V ++AAS GY+++C ++ I+A+ +++GSIGV+ Q P Sbjct: 156 LAAAQLDRIRSKGIKLTACVDKVAASGGYMMACVADRIIASPFAVLGSIGVVAQLPNFHR 215 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL K V + + + K + F E K Q + ++ ++ F VSE R P Sbjct: 216 FLKKNDVDFEVLTAGEHKRTLTIFGENTDKGRQKFLEDLEDTHVLFKEYVSERR--PDLD 273 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 +++G IW G A V LID + +E G S+ + P+ Sbjct: 274 IQAVANGDIWFGKRALDVKLIDEIKTSDEYLIEACERGDVISVSFQRKRTLPEK------ 327 Query: 264 KNLSISSLLEDTI 276 L+ S+ LE T+ Sbjct: 328 LGLATSTALEHTV 340 >gi|32471387|ref|NP_864380.1| proteinase IV homolog yteI [Rhodopirellula baltica SH 1] gi|32443228|emb|CAD72059.1| proteinase IV homolog yteI [Rhodopirellula baltica SH 1] Length = 468 Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 122/319 (38%), Gaps = 53/319 (16%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLS 74 ++ D+ +A + + G + D E++ I D + A+++ ++ Sbjct: 140 NAKSSDSQSRIAIVDVDGLLIDQNFSGFGSMGENPVSLFREKMRHIESDPTILAVVLRIN 199 Query: 75 SPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG A + + +Q +K+ + PV+ + Y ++ ++ IVA TS+VG I Sbjct: 200 SPGGGVTASDMLAHQLQHLKSNRNIPVVACLMTTGTGGAYYLATHADAIVAHPTSVVGGI 259 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ ++ L + + +KS SP + + ++Q + D + F+ Sbjct: 260 GVILNNYNMEDTLGQFNIVSLPIKSGDKIDVGSPERMMQREERDLLQSMADEFHQRFIEQ 319 Query: 193 VSESRN-------------IPYDKTLVL----------------------SDGRIWTGAE 217 V SR + L DGR+ +G Sbjct: 320 VRSSRGERLVVTSEVDESNLDESDADKLDAGDLDRDDMDDAELKPSDLIPFDGRVVSGLH 379 Query: 218 AKKVGLIDVVGGQEEVWQ---SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 A+ +GL+D G ++ + L ++ ++ N F N+ ++S+L Sbjct: 380 AQTIGLVDQTGYLDDAVSLAGRMAGLSSSPALVLLRRDNDRAMSEFDVTPNVPMTSILPI 439 Query: 275 TIPLMKQTKVQGLWAVWNP 293 +P + ++ + +W P Sbjct: 440 QLPGLDRSSMPTFLYLWQP 458 >gi|219852684|ref|YP_002467116.1| signal peptide peptidase SppA, 36K type [Methanosphaerula palustris E1-9c] gi|219546943|gb|ACL17393.1| signal peptide peptidase SppA, 36K type [Methanosphaerula palustris E1-9c] Length = 265 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 13/222 (5%) Query: 34 NSPHVARIAIRGQI----------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ HV + G + S+ + + + D A+++ ++SPGG+ A Sbjct: 46 HTGHVTVVRAEGTLVTGLVDSSDSTGSEVIGNALRAAADDPMTDAIVLRVNSPGGTPSAA 105 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I I+ K +KPV+ + ++A SA YLIS ++ I A + +IG ++ + Sbjct: 106 EEIIGDIEYAKTKKPVVVSMGDIATSAAYLISVHADRIYANPDTFTANIGTIWTFSNDSE 165 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 ++ K G ++ VKS MK S + + Q +V++S+ F+ V R + Sbjct: 166 WMKKKGYQVEVVKSGEMKDMGSSSRSLTTEERDYAQQLVNASFESFISDVLSHRPVNRTA 225 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 DGR+ G EA +GL+D +G + + L +S Sbjct: 226 IE---DGRVIRGQEALDLGLVDKLGNLNDAEDAATDLARTRS 264 >gi|90415994|ref|ZP_01223927.1| probable protease [marine gamma proteobacterium HTCC2207] gi|90332368|gb|EAS47565.1| probable protease [marine gamma proteobacterium HTCC2207] Length = 363 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 12/231 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGS 79 + + P V + G + S +E+ + + S +D ++V L S GG Sbjct: 102 DPEAELPAQKPRVFVVNFYGNVSASAVTNLREEVTAILSQASANDE---VVVRLESGGGM 158 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 ++ + +++ R P+ V ++AAS GY+++C ++ I+AA +++GSIGV+ Q Sbjct: 159 VHSYGLASSQLDRIRKRNIPLTVCVDKVAASGGYMMACVADKIIAAPFAILGSIGVVAQL 218 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P L K V + + + K + F E + + ++ ++ F V E R Sbjct: 219 PNFNKVLKKHDVEFELLTAGEHKRTLTMFGENTDSGREKFLEELEDTHSLFKEFVQERR- 277 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 P +++ G +W G A V L+D + +E + I + Sbjct: 278 -PQLDIDLIATGEVWFGTRALNVALVDDLQTSDEYLVARAQEADVYEIAFV 327 >gi|241758993|ref|ZP_04757105.1| protease [Neisseria flavescens SK114] gi|241320814|gb|EER57047.1| protease [Neisseria flavescens SK114] Length = 331 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 + LSL+ ++ + S H A I + G+I + Q L + +E + +A Sbjct: 57 LIFLSLIFGLAEEEGKTTSIHARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNA 116 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 117 KAIIIRANSPGGSPVVSNTAFNEVRRLKAEHKDIPVYLVAEDMCASGCYYIAAAADKIYA 176 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 177 DPSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLG 236 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + GRI+TG EAK+VGLID G V + + Sbjct: 237 DIHQEFIKAVKLGRGTRLKDKQYPDVFSGRIYTGKEAKQVGLIDDFGSIYSVARDVVKAP 296 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + D++ + F + L + Sbjct: 297 ELVNYTPQDDFSKMLSRRFGAEVKAKVKETLSE 329 >gi|225077079|ref|ZP_03720278.1| hypothetical protein NEIFLAOT_02132 [Neisseria flavescens NRL30031/H210] gi|224951636|gb|EEG32845.1| hypothetical protein NEIFLAOT_02132 [Neisseria flavescens NRL30031/H210] Length = 331 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 10/273 (3%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 + LSL+ ++ + S H A I + G+I + Q L + +E + +A Sbjct: 57 LIFLSLIFGLAEEEGKTTSIHARSEHTAVIDLTGEIGNDIDDQVQILRDSMEAAYENGNA 116 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGYLISCASNIIVA 123 A+I+ +SPGGS F ++++K PV +M AS Y I+ A++ I A Sbjct: 117 KAIIIRANSPGGSPVVSNTAFNEVRRLKAEHKNIPVYLVAEDMCASGCYYIAAAADKIYA 176 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIGV+ +DK GV + + K PF+ P Q+ + ++ Sbjct: 177 DPSSIVGSIGVIGGGFDFTGLMDKAGVKRRLKTAGSNKGMGDPFTPETPAQTQIWETMLG 236 Query: 184 SSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F++ V R + + + GRI+TG EAK+VGLID G V + + Sbjct: 237 DIHQEFIKAVKLGRGARLKDKQYPDVFSGRIYTGKEAKQVGLIDDFGSIYSVARDVVKAP 296 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 + D++ + F + L + Sbjct: 297 ELVNYTPQDDFSKMLSRRFGAEVKAKVKETLSE 329 >gi|68250286|ref|YP_249398.1| putative periplasmic protease [Haemophilus influenzae 86-028NP] gi|148825774|ref|YP_001290527.1| putative periplasmic protease [Haemophilus influenzae PittEE] gi|229845217|ref|ZP_04465350.1| putative periplasmic protease [Haemophilus influenzae 6P18H1] gi|68058485|gb|AAX88738.1| possible protease SohB [Haemophilus influenzae 86-028NP] gi|148715934|gb|ABQ98144.1| predicted inner membrane peptidase [Haemophilus influenzae PittEE] gi|229811812|gb|EEP47508.1| putative periplasmic protease [Haemophilus influenzae 6P18H1] gi|309972922|gb|ADO96123.1| Probable protease SohB [Haemophilus influenzae R2846] Length = 353 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 10/211 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + G I S+ E I I +++ + +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKPED--EVLLRLESPGGIVHNYGFA 157 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L Sbjct: 158 ASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLL 217 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + E K Q Q ++ ++ F + VS++R P Sbjct: 218 KKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDID 275 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G W G +A + L+D + +++ Sbjct: 276 KIATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|307249131|ref|ZP_07531138.1| protease sohB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854419|gb|EFM86615.1| protease sohB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 351 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|226944831|ref|YP_002799904.1| putative periplasmic protease [Azotobacter vinelandii DJ] gi|226719758|gb|ACO78929.1| Peptidase, S49 family [Azotobacter vinelandii DJ] Length = 342 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 12/215 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 P + + G I S E+ + +D +++ L S GG ++ Sbjct: 89 GKTKPRLFVLDFDGDIRASATDKLRHEVTAVLSMAKPEDE---VVLRLESGGGLVHSYGL 145 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ V ++AAS GY+++C + I++A +++GSIGV+ Q P V Sbjct: 146 AASQLVRIRQAGVPLTVCVDKVAASGGYMMACIGDRILSAPFAILGSIGVVAQLPNVHRL 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + + + + + K + F E K + Q+ +++++ F V+ R P Sbjct: 206 LKRHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHELFKNFVARYR--PQLTI 263 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G IW G A + L+D + +E + Sbjct: 264 DEIATGEIWLGQSALEKQLVDELMTSDEYLAAKAG 298 >gi|83945422|ref|ZP_00957770.1| signal peptide peptidase SppA [Oceanicaulis alexandrii HTCC2633] gi|83851256|gb|EAP89113.1| signal peptide peptidase SppA [Oceanicaulis alexandrii HTCC2633] Length = 598 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 15/258 (5%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISR 62 SLV + V + + +P +A I +G I L + ++ +R Sbjct: 284 SLVEIAVYHRQMTPPAAPQAPVIALIEAQGDIVTGASEAGFGAVSVGGDTLADALDAAAR 343 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNII 121 A+I+ + SPGGS A + I+ A+ + + PVI + MAAS GY I+ ++ I Sbjct: 344 APDVAAIILRIDSPGGSPIASDQIWDAVMRARQSGTPVIASMGAMAASGGYYIAAPADRI 403 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK-SVKSSPMKAEPSPFSEVNPKAVQMMQD 180 +A ++L GSIG+ + L ++G++++ S + + Sbjct: 404 IANASTLTGSIGMFGGKFVIDEALGRVGLNLEPLHVGGEYALAQSVSQPWSEAQEAGYRA 463 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + Y F R +E R++P + L+ GR+WTG +A ++GL+D +GG + S L Sbjct: 464 LAEDVYEDFTRRAAEGRDLPLARIQTLARGRVWTGRQALELGLVDEIGGFDAALASAQEL 523 Query: 241 GVDQSIRKIKDWNPPKNY 258 + + ++ P Sbjct: 524 AGLSANQPVRLKRYPARP 541 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 18/250 (7%) Query: 52 ELIERIERISRDDSATALIVSLSS---PGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMA 107 EL +E D +A+ V ++ P A E I + + + KPVI Sbjct: 85 ELSRALEHARTDSRVSAVFVRANTLSLP---AAQAEEISALLAALSDAGKPVIAHAQG-- 139 Query: 108 ASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G YL ++ I +T+ ++G+ + ++ ++ GV + ++ K Sbjct: 140 FEGGSVLPYLAVGGADEIWMQDTASFTAVGLAVETLFLGGLFEQFGVEPQMIQLHEYKNA 199 Query: 164 PSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + + + S Y + ++ +R + + + ++ EA + Sbjct: 200 ADTLTRDGYTDAHREATLSWLGSIYEVALETIAPARGLEVETLRSRLEAGPYSAEEALDL 259 Query: 222 GLIDVVGGQEEVWQS-LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 GLID +G E QS L G S+ +I ++ + + +L+E ++ Sbjct: 260 GLIDRLGHAAEARQSVLDRAGSGSSLVEIAVYH--RQMTPPAAPQAPVIALIEAQGDIVT 317 Query: 281 QTKVQGLWAV 290 G AV Sbjct: 318 GASEAGFGAV 327 >gi|159184399|ref|NP_353659.2| proteinase sohB [Agrobacterium tumefaciens str. C58] gi|159139712|gb|AAK86444.2| proteinase sohB [Agrobacterium tumefaciens str. C58] Length = 260 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 14/250 (5%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAAS 109 +E+ A A+ +SL+SPGGS I+ I+++ K V+ V ++AAS Sbjct: 15 SYAPLLEKAFAVKDAPAVAISLNSPGGSPVQARMIYNRIRQLAEEKDKKVLIFVEDVAAS 74 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+I+ A + I+A TS+VGSIGV+ L K+GV + + K PF Sbjct: 75 GGYMIALAGDEIIADPTSIVGSIGVVSGGFGFPEMLRKIGVERRVYTAGENKVILDPFQP 134 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ + ++ F+ +V R L G WTG +GLID +G Sbjct: 135 EKEGDIDYLKSLQVEIHNVFIDMVKMRRGSKLKGDDALFSGLFWTGMRGLDLGLIDGLGD 194 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT-------IPLMKQT 282 EV + Y V K++ + ++ + + ++++ L L + Sbjct: 195 MREVLRRRYGTKV-----KLQLISGGRSLFGKKVPGVNMALGLNAERLAAGAVSGLAEVA 249 Query: 283 KVQGLWAVWN 292 + + LW+ + Sbjct: 250 EEKALWSRFG 259 >gi|145641066|ref|ZP_01796647.1| predicted inner membrane peptidase [Haemophilus influenzae R3021] gi|145274227|gb|EDK14092.1| predicted inner membrane peptidase [Haemophilus influenzae 22.4-21] Length = 323 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 10/211 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + G I S+ E I I +++ + +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKPED--EVLLRLESPGGIVHNYGFA 157 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L Sbjct: 158 ASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLL 217 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + E K Q Q ++ ++ F + VS++R P Sbjct: 218 KKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDID 275 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G W G +A + L+D + +++ Sbjct: 276 KIATGEHWFGQQAFALQLVDEISTSDDLILE 306 >gi|190149277|ref|YP_001967802.1| protease SohB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307244809|ref|ZP_07526908.1| protease sohB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307251529|ref|ZP_07533436.1| protease sohB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256029|ref|ZP_07537817.1| protease sohB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307262588|ref|ZP_07544219.1| protease sohB [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914408|gb|ACE60660.1| putative protease SohB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306854254|gb|EFM86460.1| protease sohB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306860993|gb|EFM92999.1| protease sohB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865451|gb|EFM97346.1| protease sohB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306872086|gb|EFN03799.1| protease sohB [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 351 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|220916373|ref|YP_002491677.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] gi|219954227|gb|ACL64611.1| signal peptide peptidase SppA, 36K type [Anaeromyxobacter dehalogenans 2CP-1] Length = 834 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 19/233 (8%) Query: 38 VARIAIRGQIE---------------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + G I ++ + I R + D + A+++ + S GG A Sbjct: 544 IQVVRVEGIIARGRSRADPLGADGVAGAETIAAEIHRAADDAAVRAIVLRIESGGGDGLA 603 Query: 83 GEAIFRA-IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I+R ++ + KPVI + ++AAS GYL++ ++ I+A ++L GSIGV P + Sbjct: 604 SDLIWREAVRARRKGKPVIASMGDLAASGGYLVAVGADAILAERSTLTGSIGVFAAKPDL 663 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L KL + ++ + S P +++ V + Y FV V+E R + Sbjct: 664 SGLLAKLSIHPEAYQRGENARLVSVLKPWTPAERAVLEKQVGAFYRQFVARVAEGRRLTT 723 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW---QSLYALGVDQSIRKIKD 251 + ++ GR+WTG +A + L+D +G + + L D + ++ Sbjct: 724 AEVEAVAGGRVWTGQQALERRLVDRIGTLADAIRLARERIGLAPDDVVEVRRE 776 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 19/200 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAA 108 L+ R+E D AL+V + GG + G E + + V+ RKPV+ + Sbjct: 327 TLVTRLEAARDDPEVGALLVRI---GGLSLGGGRVEELRALLAAVRARKPVLAYLEG--- 380 Query: 109 SAG---YLISCASNIIVAAETS--LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G Y ++ + I A + +V G+ +++ L +LG++ VK+ K+ Sbjct: 381 -GGTREYWLATGATAIAAPPGAPLIVN--GISTSQLFLRGGLARLGIAFDVVKAGAYKSA 437 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 P +P+A + + V+D + FV V+E+R +P ++ L D ++T EAK Sbjct: 438 AEPLVRDAPSPEAREATEAVLDDVFGRFVAQVAEARRLPPERVRALVDQGLFTAEEAKDA 497 Query: 222 GLIDVVGGQEEVWQSLYALG 241 GL+D V +E+ + A+ Sbjct: 498 GLVDAVAWPDELERWGRAVA 517 >gi|260576443|ref|ZP_05844433.1| peptidase S49 [Rhodobacter sp. SW2] gi|259021326|gb|EEW24632.1| peptidase S49 [Rhodobacter sp. SW2] Length = 266 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 25/268 (9%) Query: 36 PHVARIAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P VA I + G I + L IER A+ + ++SPGGSA I Sbjct: 12 PWVAVIRLSGAIGAGGRTGAGLSDEALAPVIERAFSRGKPKAVALVINSPGGSAVQSSLI 71 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ K PV V ++AAS GY ++CA++ I ++S+VGSIGV+F Sbjct: 72 AARIRRLSKEKKVPVHAFVEDVAASGGYWLACAADHIWVDDSSIVGSIGVIFASFGFPEL 131 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + + GV + + K+ PF P+ + + + F+ V R + Sbjct: 132 MKRQGVERRVHTAGRSKSLADPFLPEKPEDAARLLALAAPIHQAFIAHVKARRGARLAEA 191 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L + +W G +A +GL D V ++LY VD + + ++ + Sbjct: 192 D-LFNADVWVGQQAVDLGLADGVAHLVPKLKALYGDKVD-----LVPYGRRRSLFQRFGA 245 Query: 265 NLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + +L E + + LW+ + Sbjct: 246 RMVGDALAE--------VEERALWSRFG 265 >gi|307260458|ref|ZP_07542153.1| protease sohB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869861|gb|EFN01643.1| protease sohB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 351 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|261492956|ref|ZP_05989500.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495996|ref|ZP_05992408.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308346|gb|EEY09637.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311381|gb|EEY12540.1| putative inner membrane peptidase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 350 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 109/255 (42%), Gaps = 9/255 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERI--SRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ + + G + + L I+ + + +++ L SPGG + Sbjct: 98 ESPSRLFVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAAS 157 Query: 89 AIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q++++R + V ++AAS GY+++C +N IV+A +++GS+GV+ Q P + L K Sbjct: 158 QLQRLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNIHRLLKK 217 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+ R P + Sbjct: 218 HDIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHSLFKQFVARRR--PQLDIEQV 275 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + G W G +A ++ L+D + +++ L A+ + I S Sbjct: 276 ATGEHWFGQQAIELNLVDEIATSDDLL--LNAIKEKEVIELKYKEKKKLAQKLGSQFEQS 333 Query: 268 ISSLLEDTIPLMKQT 282 +LL + + T Sbjct: 334 AENLLAKILHKSRST 348 >gi|161831162|ref|YP_001596297.1| putative periplasmic protease [Coxiella burnetii RSA 331] gi|161763029|gb|ABX78671.1| peptidase, S49 (protease IV) family [Coxiella burnetii RSA 331] Length = 338 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 15/255 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERIS 61 IK +Y + + + + + + +G I S +E+ + + Sbjct: 69 IKDKYELKRFLKSQKKEKKKKPNTTEAKKRIFVLNFQGDIRASAVCALREEITAVLTTAT 128 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNI 120 RDD +++ L S GG + +Q++K+ ++ + ++AAS GYL++C ++ Sbjct: 129 RDDQ---VLLRLESGGGVVHGYGLAASQLQRIKDAHIKLVIAIDKVAASGGYLMACVADR 185 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+AA ++VGSIGVL Q P +L K + + V + K + F E K M++ Sbjct: 186 IIAAPFAIVGSIGVLAQLPNFHRYLRKKYIDFEQVMAGDYKRTLTLFGENTEKGRAKMKE 245 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ ++ F + E R ++ G W ++A + L+D + ++ L A Sbjct: 246 EVEETHTLFKSFIKEHRQ--EVDVEQIATGEHWYASKALDLRLVDELKTSDD---YLLAA 300 Query: 241 GVDQSIRKIKDWNPP 255 + + +++ P Sbjct: 301 SQNYDLFEVQYKRKP 315 >gi|145631466|ref|ZP_01787235.1| predicted inner membrane peptidase [Haemophilus influenzae R3021] gi|144982896|gb|EDJ90409.1| predicted inner membrane peptidase [Haemophilus influenzae R3021] Length = 353 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 10/211 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + G I S+ E I I +++ + +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKPED--EVLLRLESPGGIVHNYGFA 157 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L Sbjct: 158 ASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLL 217 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + E K Q Q ++ ++ F + VS++R P Sbjct: 218 KKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDID 275 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G W G +A + L+D + +++ Sbjct: 276 KIATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|254282105|ref|ZP_04957073.1| putative protease SohB [gamma proteobacterium NOR51-B] gi|219678308|gb|EED34657.1| putative protease SohB [gamma proteobacterium NOR51-B] Length = 347 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 16/254 (6%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAG 83 S + P + + G + +Q +E++ + ++V L SPGG ++ Sbjct: 91 SAEDARRPRLFVLNFDGDLRAAQ--VEQLREELSAILPEARKEDEVLVRLESPGGMVHSY 148 Query: 84 EAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +++V P+ V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P Sbjct: 149 GLAASQLRRVVDAEIPLTVAVDKVAASGGYMMACVADKIIAAPFAVIGSIGVIAQLPNFH 208 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E K Q + ++ ++ F + V+E+R Sbjct: 209 KVLKKNDIDFELLTAGEYKRTLTMFGENTDKGRQKFLEELEDTHALFKQFVAENRK--QV 266 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G +W G A V L+D + +E Q +R + K +W Sbjct: 267 AIEQVATGEVWFGQRALDVQLVDQLCTSDEYLQKQLDERDIIEVRYV-----GKRHWQEK 321 Query: 263 LKNLSISSLLEDTI 276 L L+ S +E + Sbjct: 322 L-GLAAESAIERAL 334 >gi|296106434|ref|YP_003618134.1| Periplasmic protease [Legionella pneumophila 2300/99 Alcoy] gi|295648335|gb|ADG24182.1| Periplasmic protease [Legionella pneumophila 2300/99 Alcoy] Length = 311 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + I G I+ +Q +E++ +S ++V L SPGG+ Sbjct: 74 RPVLYVIDFSGDIKATQ--VEQLRDEVTSVLSIAKPEDEVLVRLESPGGAVNGYGLAASQ 131 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K Sbjct: 132 LQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKN 191 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + F+E K + Q+ ++ + F V ++R ++ Sbjct: 192 NIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFREYVLKNR--SQLDIDKVA 249 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G W +A + L+D + +E A Sbjct: 250 TGEHWIAKDAFDLRLVDKLATSDEYLIEKMA 280 >gi|29653702|ref|NP_819394.1| putative periplasmic protease [Coxiella burnetii RSA 493] gi|153207278|ref|ZP_01946042.1| peptidase, S49 (protease IV) family [Coxiella burnetii 'MSU Goat Q177'] gi|154707075|ref|YP_001425059.1| putative periplasmic protease [Coxiella burnetii Dugway 5J108-111] gi|165918692|ref|ZP_02218778.1| peptidase, S49 (protease IV) family [Coxiella burnetii RSA 334] gi|212218185|ref|YP_002304972.1| putative periplasmic protease [Coxiella burnetii CbuK_Q154] gi|29540965|gb|AAO89908.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii RSA 493] gi|120576766|gb|EAX33390.1| peptidase, S49 (protease IV) family [Coxiella burnetii 'MSU Goat Q177'] gi|154356361|gb|ABS77823.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii Dugway 5J108-111] gi|165917627|gb|EDR36231.1| peptidase, S49 (protease IV) family [Coxiella burnetii RSA 334] gi|212012447|gb|ACJ19827.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii CbuK_Q154] Length = 338 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 15/255 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERIS 61 IK +Y + + + + + + +G I S +E+ + + Sbjct: 69 IKDKYELKRFLKSQKKEKKKKPNTTEAKKRIFVLNFQGDIRASAVCALREEITAVLTTAT 128 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNI 120 RDD +++ L S GG + +Q++K+ ++ + ++AAS GYL++C ++ Sbjct: 129 RDDE---VLLRLESGGGVVHGYGLAASQLQRIKDAHIKLVIAIDKVAASGGYLMACVADR 185 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+AA ++VGSIGVL Q P +L K + + V + K + F E K M++ Sbjct: 186 IIAAPFAIVGSIGVLAQLPNFHRYLRKKYIDFEQVMAGDYKRTLTLFGENTEKGRAKMKE 245 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ ++ F + E R ++ G W ++A + L+D + ++ L A Sbjct: 246 EVEETHTLFKSFIKEHRQ--EVDVEQIATGEHWYASKALDLRLVDELKTSDD---YLLAA 300 Query: 241 GVDQSIRKIKDWNPP 255 + + +++ P Sbjct: 301 SQNYDLFEVQYKRKP 315 >gi|262376071|ref|ZP_06069302.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] gi|262309165|gb|EEY90297.1| signal peptide peptidase SppA, 36K type [Acinetobacter lwoffii SH145] Length = 320 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 17/263 (6%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA----LIVSLSSPGGSAYAGEA 85 + + + + +G + S + L E I I +A A ++V L SPGG + Sbjct: 53 KKTNQKIYVLDFKGDMAASAVEGLREEITLILA--TAKAGRDRVVVRLESPGGMVHGYGL 110 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ + V ++AAS GY+++C +N I++A ++VGSIGV+ Q P Sbjct: 111 AAAQLVRLREAGFHLTICVDKVAASGGYMMACIANEIISAPFAIVGSIGVVAQVPNFNRL 170 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + + + K + F E + ++ + ++ F V + R P Sbjct: 171 LKDNKIDFELYTAGQYKRTVTMFGENTEEGKAKFEEELQQTHALFKHFVEKYR--PQLNI 228 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G W G +A + L+D + +E +L + I K + Sbjct: 229 EKVATGEHWYGRDALDLNLVDKLQTSDEYLLNLL------TQHDIYSIQTRKKPTLGEKL 282 Query: 265 NLSISSLLEDTIPLMKQTKVQGL 287 L + + + IP + ++ L Sbjct: 283 GLQAAQIADSLIPTVMNNVMESL 305 >gi|270159903|ref|ZP_06188559.1| S49 family peptidase [Legionella longbeachae D-4968] gi|289165342|ref|YP_003455480.1| inner membrane peptidase [Legionella longbeachae NSW150] gi|269988242|gb|EEZ94497.1| S49 family peptidase [Legionella longbeachae D-4968] gi|288858515|emb|CBJ12396.1| putative inner membrane peptidase [Legionella longbeachae NSW150] Length = 312 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 11/238 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFR 88 + P + I G I+ SQ +L E I + + ++V L SPGG + Sbjct: 72 NEEQPTLYVIDFHGDIKASQVEQLREEINALLCTATPRDEVLVRLDSPGGIVNSYGLAAS 131 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q++++R P+ + +MAAS GYL++C +N ++AA +++GSIGV+ Q P +L K Sbjct: 132 QLQRIRDRNIPLTVSIDKMAASGGYLMACVANQVIAAPFAIIGSIGVVAQIPNFHRWLKK 191 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + ++ + + K + F E K + QD ++ + F V+ +R + Sbjct: 192 HDIDVELLTAGEYKRTLTLFGENTEKGREKAQDDLEKIHAAFRNYVAANR--DQLDIDKV 249 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 S G W +A + LID + ++ L S + K PPK + L Sbjct: 250 STGEHWLAKDAFDLKLIDKLCTSDDYL-----LEKISSYKAFKLTVPPKTFLANKLLK 302 >gi|148360499|ref|YP_001251706.1| signal peptide peptidase SppA [Legionella pneumophila str. Corby] gi|148282272|gb|ABQ56360.1| signal peptide peptidase SppA (protease IV) [Legionella pneumophila str. Corby] Length = 311 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + I G I+ +Q +E++ +S ++V L SPGG+ Sbjct: 74 RPVLYVIDFSGDIKATQ--VEQLRDEVTSVLSIAKPEDEVLVRLESPGGAVNGYGLAASQ 131 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K Sbjct: 132 LQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKN 191 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + F+E K + Q+ ++ + F V ++R ++ Sbjct: 192 NIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFREYVLKNR--SQLDIDKVA 249 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G W +A + L+D + +E A Sbjct: 250 TGEHWIAKDAFDLRLVDKLATSDEYLIEKMA 280 >gi|86157564|ref|YP_464349.1| signal peptide peptidase A [Anaeromyxobacter dehalogenans 2CP-C] gi|85774075|gb|ABC80912.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Anaeromyxobacter dehalogenans 2CP-C] Length = 834 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 114/278 (41%), Gaps = 36/278 (12%) Query: 38 VARIAIRGQIE---------------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + G I ++ + I R + D + A+++ + S GG A Sbjct: 544 IQVVRVEGIIARGRSRPDPLGGDGVAGAESIAAEIHRAADDAAVRAIVLRIESGGGDGLA 603 Query: 83 GEAIFRA-IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I+R ++ + KPVI + ++AAS GYL++ ++ I+A ++L GSIGV P + Sbjct: 604 SDLIWREAVRARRKGKPVIASMGDLAASGGYLVAVGADAILAERSTLTGSIGVFAAKPDL 663 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L KL + ++ + S +++ + + Y FV V+E R + Sbjct: 664 SGLLAKLSIHPEAYQRGENARLASVLKPWTAAERAVLEKQISAFYRQFVARVAEGRRLTA 723 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW--------- 252 + ++ GR+WTG +A + L+D +G + + + ++ Sbjct: 724 AEVEAVAGGRVWTGQQALERRLVDRIGTLADAIRLARERAGIAADDVVEVRRADGGGALA 783 Query: 253 -----------NPPKNYWFCDLKNLSISSLLEDTIPLM 279 PP L LS +LL D P++ Sbjct: 784 RVAGRALAAAPEPPLAGLARALPELSALALLADIGPVL 821 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 19/200 (9%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG---EAIFRAIQKVKNRKPVITEVHEMAA 108 L+ R+E D AL+V + GG G E + + V+ RKPV+ + Sbjct: 327 TLVTRLEAARDDPEVGALLVRI---GGLPLGGGRVEELRALLAAVRARKPVLAYLEG--- 380 Query: 109 SAG---YLISCASNIIVAAETS--LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G Y ++ + I A + +V G+ +++ L +LG++ VK+ K+ Sbjct: 381 -GGTREYWLATGATAIAAPPGAPLIVN--GISTSQLFLRGGLARLGIAFDVVKAGAYKSA 437 Query: 164 PSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 P +P+A + + V+D + FV V+E+R +P ++ L D ++ EAK+ Sbjct: 438 AEPLVRDAPSPEAREATEAVLDDVFGRFVAQVAEARRLPPERVRALVDQGLFGAEEAKEA 497 Query: 222 GLIDVVGGQEEVWQSLYALG 241 GL+D+V +E+ Q A+ Sbjct: 498 GLLDLVAWPDELEQWGRAVA 517 >gi|16273569|ref|NP_439824.1| putative periplasmic protease [Haemophilus influenzae Rd KW20] gi|260581275|ref|ZP_05849093.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1174392|sp|P45315|SOHB_HAEIN RecName: Full=Probable protease sohB gi|1574534|gb|AAC23328.1| protease, putative (sohB) [Haemophilus influenzae Rd KW20] gi|260092102|gb|EEW76047.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 353 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 32 EDNSPHVARIAIRGQIEDSQE--LIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 ++ V + G I S+ L E I I S +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L K Sbjct: 160 QLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + E K Q Q ++ ++ F + VS++R P + Sbjct: 220 HDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKI 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + G W G +A + L+D + +++ Sbjct: 278 ATGEHWFGQQAIALQLVDEISTSDDLILE 306 >gi|254452000|ref|ZP_05065437.1| peptidase S49 [Octadecabacter antarcticus 238] gi|198266406|gb|EDY90676.1| peptidase S49 [Octadecabacter antarcticus 238] Length = 262 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 10/215 (4%) Query: 33 DNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + PHVA I ++G I S + L + IE+ R A+ + +SSPGGS I Sbjct: 9 KSDPHVAVIRLQGAIATSGRALSDRGLADSIEKAFR-SKPKAVALEISSPGGSPVQSSLI 67 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+++ + K PV + V ++AAS GY ++ A + I S+VGSIGV+ + Sbjct: 68 CARIRRLADEKDIPVYSFVEDVAASGGYWLATAGDEIYVDRGSIVGSIGVISAGFGLTGT 127 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LDK+G + + K+ PF P V+ ++ ++ + +F VS R Sbjct: 128 LDKIGAERRVYTAGKSKSMLDPFQAEKPADVKRLKGLLRDMHVFFKDHVSTRRAGKLVD- 186 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L G IW G ++ VGL D +G + + Sbjct: 187 QDLFTGDIWVGQKSIDVGLADHLGHLVPTMKDRFG 221 >gi|254240224|ref|ZP_04933546.1| hypothetical protein PA2G_00866 [Pseudomonas aeruginosa 2192] gi|126193602|gb|EAZ57665.1| hypothetical protein PA2G_00866 [Pseudomonas aeruginosa 2192] Length = 341 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 12/211 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V + G I+ S E+ + +DD +++ L S GG + Sbjct: 88 EQKSRVYVLDFDGDIKASATEQLRHEVTAVLSMAGKDDE---VVLRLESGGGMVHGYGLA 144 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C + I++A +++GSIGV+ Q P V L Sbjct: 145 ASQLARIRQAGVPLTVCVDKVAASGGYMMACIGDRILSAPFAILGSIGVVAQLPNVHRLL 204 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + Q+ ++ ++ F V+ R P Sbjct: 205 KKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLEVTHELFKNFVAHYR--PQLNMD 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G +W G A L+D + +E Sbjct: 263 EIATGEVWLGQAALGKLLVDELKTSDEYLAE 293 >gi|54293830|ref|YP_126245.1| putative periplasmic protease [Legionella pneumophila str. Lens] gi|53753662|emb|CAH15120.1| hypothetical protein lpl0886 [Legionella pneumophila str. Lens] Length = 312 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + I G I+ +Q +E++ +S ++V L SPGG+ Sbjct: 75 RPVLYVIDFSGDIKATQ--VEQLRDEVTSVLSIAKPEDEVLVRLESPGGAVNGYGLAASQ 132 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K Sbjct: 133 LQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKN 192 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + F+E K + Q+ ++ + F V ++R ++ Sbjct: 193 NIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFREYVLKNR--SQLDIDKVA 250 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G W +A + L+D + +E A Sbjct: 251 TGEHWIAKDAFDLRLVDKLATSDEYLIEKMA 281 >gi|254670000|emb|CBA04724.1| putative secreted protease [Neisseria meningitidis alpha153] Length = 366 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 109 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 165 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 166 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 225 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 226 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 284 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 285 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 332 >gi|54296876|ref|YP_123245.1| putative periplasmic protease [Legionella pneumophila str. Paris] gi|229270458|ref|YP_094890.2| putative periplasmic protease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750661|emb|CAH12068.1| hypothetical protein lpp0917 [Legionella pneumophila str. Paris] Length = 312 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 35 SPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + I G I+ +Q +E++ +S ++V L SPGG+ Sbjct: 75 RPVLYVIDFSGDIKATQ--VEQLRDEVTSVLSIAKPEDEVLVRLESPGGAVNGYGLAASQ 132 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GSIGV+ Q P +L K Sbjct: 133 LQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGSIGVVAQIPNFHRWLKKN 192 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++ + + K + F+E K + Q+ ++ + F V ++R ++ Sbjct: 193 NIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFREYVLKNR--SQLDIDKVA 250 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G W +A + L+D + +E A Sbjct: 251 TGEHWIAKDAFDLRLVDKLATSDEYLIEKMA 281 >gi|145629227|ref|ZP_01785026.1| predicted inner membrane peptidase [Haemophilus influenzae 22.1-21] gi|145639162|ref|ZP_01794769.1| predicted inner membrane peptidase [Haemophilus influenzae PittII] gi|144978730|gb|EDJ88453.1| predicted inner membrane peptidase [Haemophilus influenzae 22.1-21] gi|145271724|gb|EDK11634.1| predicted inner membrane peptidase [Haemophilus influenzae PittII] gi|309750742|gb|ADO80726.1| Probable protease SohB [Haemophilus influenzae R2866] Length = 353 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 10/211 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + G I S+ E I I +++ + +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKPED--EVLLRLESPGGIVHNYGFA 157 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L Sbjct: 158 ASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLL 217 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K V + + + K + E K Q Q ++ ++ F + VS++R P Sbjct: 218 KKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDID 275 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G W G +A + L+D + +++ Sbjct: 276 KIATGEHWFGQQAFALQLVDEISTSDDLILE 306 >gi|325198698|gb|ADY94154.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis G2136] Length = 350 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSSETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+I V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLIVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|303250487|ref|ZP_07336684.1| putative periplasmic protease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650475|gb|EFL80634.1| putative periplasmic protease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 326 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|307253763|ref|ZP_07535617.1| protease sohB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258220|ref|ZP_07539963.1| protease sohB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306863247|gb|EFM95187.1| protease sohB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867680|gb|EFM99525.1| protease sohB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 351 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEEAHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|146307553|ref|YP_001188018.1| putative periplasmic protease [Pseudomonas mendocina ymp] gi|145575754|gb|ABP85286.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Pseudomonas mendocina ymp] Length = 339 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 19/261 (7%) Query: 36 PHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P V + G I+ S E+ + DD +++ L S GG ++ Sbjct: 90 PRVFVLDFDGDIKASATDNLRHEVTALLSLAKADDE---VVLRLESGGGMVHSYGLASSQ 146 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++++ P+ V ++AAS GY+++C I+AA +++GSIGV+ Q P V L K Sbjct: 147 LVRIRDAGIPLTVCVDKVAASGGYMMACIGQKILAAPFAILGSIGVVAQLPNVHRLLKKH 206 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q+ + +++ F V+ R P ++ Sbjct: 207 DIDFEVLTAGEYKRTLTIFGENTEKGREKFQEDLQTTHDLFKGFVARYR--PQLDIDAIA 264 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G +W G A++ L+D + + Q L V+ + + + L+ Sbjct: 265 TGEVWLGMAAQERLLVDELKTSD---QYLAERAVEAELFHLHFAQKKS---LQERVGLAA 318 Query: 269 SSLLED-TIPLMKQTKVQGLW 288 S+ L+ + + + Q W Sbjct: 319 SAALDRFVLTWLSRLNQQRFW 339 >gi|261364052|ref|ZP_05976935.1| signal peptide peptidase SppA [Neisseria mucosa ATCC 25996] gi|288568087|gb|EFC89647.1| signal peptide peptidase SppA [Neisseria mucosa ATCC 25996] Length = 324 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 21/268 (7%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVED-----NSPHVARIAIRGQIEDSQE-----LIE 55 + + + ++ ++ + ++F H A I + G+I + L + Sbjct: 39 RFWRNFWRIIGVLLIAALWFGSDDGTAGQGLAAGKEHTAVITLEGEIGGGIDDQVKMLRD 98 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK---PVITEVHEMAASAGY 112 +E + +A +++ +SPGGS F I+++K PV +M AS Y Sbjct: 99 SMEAAYSNPNAKGIVIRANSPGGSPVISNTAFNEIRRLKGEHKDIPVYVVAEDMCASGCY 158 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A +S+VGSIGV+ V +DKLG+ + + K PF+ P Sbjct: 159 YIAAAADKIYADPSSIVGSIGVIGGGFDVTGLMDKLGIKRRLKTAGSNKGMGDPFTPETP 218 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + ++ + ++ ++ F++ V R + + + GR++TG EAKKVGLID G Sbjct: 219 EQAKIWEAMLSDTHQEFIKAVKLGRGEKLKDKEYPDVFSGRVYTGLEAKKVGLIDDFGSV 278 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + + + ++ + P ++ Sbjct: 279 YSIARDVV------KAPELVSYTPEDDF 300 >gi|254497745|ref|ZP_05110518.1| putative periplasmic protease [Legionella drancourtii LLAP12] gi|254353038|gb|EET11800.1| putative periplasmic protease [Legionella drancourtii LLAP12] Length = 282 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 15/241 (6%) Query: 37 HVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + G I+ SQ +E++ + ++V L SPGG + +Q Sbjct: 47 TLYVLDFHGDIKASQ--VEQLRDEITAILCTAKPEDEVLVRLDSPGGIVNSYGLAASQLQ 104 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++++ P+ + ++AAS GYL++C +N I+AA +++GSIGV+ Q P + +L K V Sbjct: 105 RIRDKNIPLTVSIDKIAASGGYLMACVANRIIAAPFAIIGSIGVVAQIPNLHRWLKKHDV 164 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 I+ + + K + E K + Q+ ++ + F ++ +R ++ G Sbjct: 165 DIELLTAGEYKRTLTLLGENTEKGRKKFQEDLEKIHTAFRNYIATNR--DQLDMDKIATG 222 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W +A ++ L+D + +E L + + K PPK L ++ Sbjct: 223 EHWLAKDALELNLVDKLSTSDEYL-----LDKVSTYKAFKLTIPPKTSLANKLLKPALRF 277 Query: 271 L 271 + Sbjct: 278 M 278 >gi|308389720|gb|ADO32040.1| putative secreted protease [Neisseria meningitidis alpha710] gi|325132727|gb|EGC55410.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M6190] Length = 366 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 109 GGEKSSETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 165 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 166 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 225 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 226 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 284 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 285 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 332 >gi|15597029|ref|NP_250523.1| periplasmic protease [Pseudomonas aeruginosa PAO1] gi|107101264|ref|ZP_01365182.1| hypothetical protein PaerPA_01002297 [Pseudomonas aeruginosa PACS2] gi|116049782|ref|YP_791411.1| putative periplasmic protease [Pseudomonas aeruginosa UCBPP-PA14] gi|218892214|ref|YP_002441081.1| putative periplasmic protease [Pseudomonas aeruginosa LESB58] gi|254234926|ref|ZP_04928249.1| hypothetical protein PACG_00801 [Pseudomonas aeruginosa C3719] gi|296389777|ref|ZP_06879252.1| putative periplasmic protease [Pseudomonas aeruginosa PAb1] gi|313110530|ref|ZP_07796415.1| putative protease [Pseudomonas aeruginosa 39016] gi|9947818|gb|AAG05221.1|AE004609_8 probable protease [Pseudomonas aeruginosa PAO1] gi|115585003|gb|ABJ11018.1| putative protease [Pseudomonas aeruginosa UCBPP-PA14] gi|126166857|gb|EAZ52368.1| hypothetical protein PACG_00801 [Pseudomonas aeruginosa C3719] gi|218772440|emb|CAW28222.1| probable protease [Pseudomonas aeruginosa LESB58] gi|310882917|gb|EFQ41511.1| putative protease [Pseudomonas aeruginosa 39016] Length = 341 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 12/211 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V + G I+ S E+ + +DD +++ L S GG + Sbjct: 88 EQKSRVYVLDFDGDIKASATEQLRHEVTAVLSMAGKDDE---VVLRLESGGGMVHGYGLA 144 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C + I++A +++GSIGV+ Q P V L Sbjct: 145 ASQLARIRQAGVPLTVCVDKVAASGGYMMACIGDRILSAPFAILGSIGVVAQLPNVHRLL 204 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + Q+ ++ ++ F V+ R P Sbjct: 205 KKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLEVTHELFKNFVAHYR--PQLNMD 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G +W G A L+D + +E Sbjct: 263 EIATGEVWLGQAALGKLLVDELKTSDEYLAE 293 >gi|238763116|ref|ZP_04624082.1| protease sohB [Yersinia kristensenii ATCC 33638] gi|238698615|gb|EEP91366.1| protease sohB [Yersinia kristensenii ATCC 33638] Length = 230 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 93/185 (50%), Gaps = 6/185 (3%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAAS 109 +E+ + + D +++ L SPGG + +++++++ + V ++AAS Sbjct: 3 EEISAVLAVATAQDE---VLLRLESPGGVVHGYGLAASQLERLRHKGIRLTVAVDKVAAS 59 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 GY+++C ++ I++A +++GSIGV+ Q P L K + ++ + K + F E Sbjct: 60 GGYMMACVADRIISAPFAIIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGE 119 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + ++ ++ ++ F + V + R P ++ G W G +AK+ GL+D +G Sbjct: 120 NTEQGREKFREDLNETHLLFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGT 177 Query: 230 QEEVW 234 ++ Sbjct: 178 SDDFL 182 >gi|257455400|ref|ZP_05620635.1| peptidase, S49 [Enhydrobacter aerosaccus SK60] gi|257447362|gb|EEV22370.1| peptidase, S49 [Enhydrobacter aerosaccus SK60] Length = 330 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 15/224 (6%) Query: 39 ARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + G I+ ++ E+ + +D +IV L S GG +A + + Sbjct: 75 FVLDFHGDIKATEVQQLREEISTLLTVAQAEDE---VIVRLESSGGMVHAYGLAAAQLAR 131 Query: 93 VKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +K + + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P L+K + Sbjct: 132 IKEAGLHLTVCIDKVAASGGYMMACVADKILAAPFAVVGSIGVVAQVPNFHDLLEKHDID 191 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 ++ + K + F E + Q Q ++ ++ F V + R P ++ G Sbjct: 192 VEVFTAGKYKRTVTVFGENTEEDKQKFQQELEETHKLFKDFVRKYR--PSLDVEQVATGE 249 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 W G +A L+D + + D + I+ P Sbjct: 250 HWYGEDAITRNLVDALQTSDSYILEKMT---DSELYAIQSRQKP 290 >gi|254805356|ref|YP_003083577.1| putative protease SohB [Neisseria meningitidis alpha14] gi|254668898|emb|CBA07061.1| putative protease SohB [Neisseria meningitidis alpha14] gi|261392171|emb|CAX49681.1| putative peptidase [Neisseria meningitidis 8013] gi|325128615|gb|EGC51484.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis N1568] gi|325204563|gb|ADZ00017.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240355] Length = 350 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|49087080|gb|AAT51414.1| PA1832 [synthetic construct] Length = 342 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 12/211 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V + G I+ S E+ + +DD +++ L S GG + Sbjct: 88 EQKSRVYVLDFDGDIKASATEQLRHEVTAVLSMAGKDDE---VVLRLESGGGMVHGYGLA 144 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C + I++A +++GSIGV+ Q P V L Sbjct: 145 ASQLARIRQAGVPLTVCVDKVAASGGYMMACIGDRILSAPFAILGSIGVVAQLPNVHRLL 204 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + Q+ ++ ++ F V+ R P Sbjct: 205 KKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLEVTHELFKNFVAHYR--PQLNMD 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G +W G A L+D + +E Sbjct: 263 EIATGEVWLGQAALGKLLVDELKTSDEYLAE 293 >gi|85705905|ref|ZP_01037001.1| peptidase, family S49 [Roseovarius sp. 217] gi|85669493|gb|EAQ24358.1| peptidase, family S49 [Roseovarius sp. 217] Length = 244 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 2/196 (1%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEM 106 + + IE+ A+ + ++SPGGS I I+++ K PV V ++ Sbjct: 11 SDETIGPVIEKAFSRGKPVAVALVINSPGGSPVQSSLIAARIRRLAEEKSIPVHAFVEDV 70 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY ++ A++ I +S++GSIGV+ FL + GV + + K+ P Sbjct: 71 AASGGYWLAVAADDIWVDASSVLGSIGVISAGFGANEFLTRQGVERRIYTAGKSKSTLDP 130 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F P+ V ++ +++ + F+ V R L G W GA + ++GL D Sbjct: 131 FMPEKPEDVTRLKGILEDIHGAFITHVKSRRGSKLADDPDLFTGEFWLGARSIELGLADG 190 Query: 227 VGGQEEVWQSLYALGV 242 +G ++LY V Sbjct: 191 IGHLVPKMKALYGDKV 206 >gi|304321517|ref|YP_003855160.1| peptidase S49 [Parvularcula bermudensis HTCC2503] gi|303300419|gb|ADM10018.1| peptidase S49 [Parvularcula bermudensis HTCC2503] Length = 280 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 16/255 (6%) Query: 36 PHVARIAIRGQIEDS---------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P + + + G I + + +E+ + A+++S++SPGGS I Sbjct: 17 PMIHIVPMEGVIAAAGRSSRSLNLSAVEGALEKAFKTGEPRAVLLSINSPGGSPVQSRMI 76 Query: 87 FRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++ + ++ PVI + ++ AS GY+++ A + I A +LVGSIGV+ + Sbjct: 77 LQKVRDLSVEHKVPVIAHIQDVGASGGYMLALAGDEIYADPFALVGSIGVIAGGFGLHEA 136 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 + +LG+ + + K++ PF +P+ V ++ ++D S+ F+ LV R + Sbjct: 137 IGRLGIERRVYTAGENKSQLDPFRPEDPRDVAHLKGILDKSHALFIDLVKTRRGDRLKGE 196 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W EA+ +GLID V ++ + + + V + + + Sbjct: 197 DKIVFTGDFWIADEAQALGLIDGVEDRDALLKRRFGDRVQSRSFDVDKRSLLSRLLSGTM 256 Query: 264 KNL----SISSLLED 274 ++++ LED Sbjct: 257 PGAWRPEAVAAALED 271 >gi|307249207|ref|ZP_07531204.1| protease sohB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858731|gb|EFM90790.1| protease sohB [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 351 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDMDVMTAGEYKRTVTLVGENTKKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|121635245|ref|YP_975490.1| putative periplasmic protease [Neisseria meningitidis FAM18] gi|218768556|ref|YP_002343068.1| putative periplasmic protease [Neisseria meningitidis Z2491] gi|120866951|emb|CAM10711.1| putative secreted protease [Neisseria meningitidis FAM18] gi|121052564|emb|CAM08904.1| putative secreted protease [Neisseria meningitidis Z2491] gi|325130673|gb|EGC53414.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis OX99.30304] gi|325134610|gb|EGC57250.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M13399] gi|325136747|gb|EGC59347.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M0579] gi|325138613|gb|EGC61172.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis ES14902] gi|325144853|gb|EGC67141.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240013] gi|325201738|gb|ADY97192.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M01-240149] gi|325205678|gb|ADZ01131.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis M04-240196] gi|325208518|gb|ADZ03970.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis NZ-05/33] Length = 350 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSSETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|330503146|ref|YP_004380015.1| putative periplasmic protease [Pseudomonas mendocina NK-01] gi|328917432|gb|AEB58263.1| putative periplasmic protease [Pseudomonas mendocina NK-01] Length = 339 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 97/219 (44%), Gaps = 12/219 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + P V + G I+ S E+ + +D +++ L S GG ++ Sbjct: 84 KTPPSKPRVFVLDFDGDIKASATDNLRHEVTALLSMAKAEDE---VVLRLESGGGMVHSY 140 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++++ P+ V ++AAS GY+++C I++A +++GSIGV+ Q P V Sbjct: 141 GLASSQLVRIRDAGIPLTVCVDKVAASGGYMMACIGQKILSAPFAILGSIGVVAQLPNVH 200 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + + + + K + F E K + Q+ +++++ F V+ R P Sbjct: 201 RLLKKHEIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHELFKGFVARYR--PQL 258 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A++ L+D + ++ A Sbjct: 259 DIDAIATGEVWLGMAAQERLLVDELKTSDQYLAERAAEA 297 >gi|165975466|ref|YP_001651059.1| putative periplasmic protease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875567|gb|ABY68615.1| serine protease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 351 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFIGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|192359025|ref|YP_001982509.1| putative periplasmic protease [Cellvibrio japonicus Ueda107] gi|190685190|gb|ACE82868.1| possible protease SohB [Cellvibrio japonicus Ueda107] Length = 364 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 105/271 (38%), Gaps = 25/271 (9%) Query: 26 SWSSHVE-DNSPHVARIAIRGQIEDS--QELIERIERISR-DDSATALIVSLSSPGGSAY 81 S + H E V + G I+ S L E I + ++V + S GG + Sbjct: 104 SGAGHAEAPEKKRVFVLDFYGDIKASACDNLREEITTVLSIAKPTDEVVVKVESGGGMVH 163 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++ ++ P+ V ++AAS GY+++C +N IVAA ++VGSIGV+ Q P Sbjct: 164 GYGLASSQLARITHKHIPLTVCVDKVAASGGYMMACVANKIVAAPFAIVGSIGVIAQLPN 223 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + + + K + F E K + ++ ++ F V E R P Sbjct: 224 FHKLLKKNDIDFEMFTAGEFKRTVTMFGENTEKGRAKFVEELEDTHVLFKEFVGEHR--P 281 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ G +W G AK V LID + +E S ++ Sbjct: 282 QVDIAKVATGEVWFGRRAKDVNLIDELQTSDEYLLSQVDQADIYTV-------------- 327 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 + L + + L Q V L W Sbjct: 328 ----EFTFKKTLPEKLGLAAQGAVDRLLMTW 354 >gi|297250560|ref|ZP_06864551.2| peptidase, S49 family [Neisseria polysaccharea ATCC 43768] gi|296838605|gb|EFH22543.1| peptidase, S49 family [Neisseria polysaccharea ATCC 43768] Length = 366 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 109 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 165 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 166 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 225 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 226 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 284 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 285 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 332 >gi|268594186|ref|ZP_06128353.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268595855|ref|ZP_06130022.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268547575|gb|EEZ42993.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268549643|gb|EEZ44662.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 359 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 102 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 158 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 159 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEV 218 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 219 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 277 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 278 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 325 >gi|77360288|ref|YP_339863.1| putative periplasmic protease [Pseudoalteromonas haloplanktis TAC125] gi|76875199|emb|CAI86420.1| protease (may metabolize cleaved signal peptides) [Pseudoalteromonas haloplanktis TAC125] Length = 339 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 9/208 (4%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P + + G ++ + E I I I+ +++ L S GG + Sbjct: 89 KPRLYVVDFIGSMDAHEVESLREEITAIISIADASKDK-VLIRLESGGGVVHGYGLAASQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q++KN P+ + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P L K Sbjct: 148 LQRIKNAGIPLSVAIDKVAASGGYMMACVADEIIAAPFAIVGSIGVIAQIPNFNKILKKN 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 V + + + K + F E KA + ++ ++ ++ F VS R P ++ Sbjct: 208 DVEFEQITAGEFKRTLTLFGENTDKAREKFREEIEQTHGLFKTFVSTQR--PSLDISSVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 G W +A + GL+DV+ ++ Sbjct: 266 TGEHWFATQAIEKGLVDVIKTSDDALLE 293 >gi|291045064|ref|ZP_06570772.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011067|gb|EFE03064.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|317163613|gb|ADV07154.1| putative periplasmic protease [Neisseria gonorrhoeae TCDC-NG08107] Length = 366 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 109 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 165 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 166 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEV 225 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 226 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 284 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 285 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 332 >gi|330722505|gb|EGH00330.1| putative protease sohB [gamma proteobacterium IMCC2047] Length = 356 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 101/209 (48%), Gaps = 11/209 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 D+ + + G I+ S+ E+ + I+ D ++++LSS GG +A Sbjct: 102 DSKKRIYVLDFDGDIKASEVDSLREEITSVLSVINADRD--EVVLTLSSGGGMVHAYGLA 159 Query: 87 FRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++++K++ + V ++AAS GY+++C ++ ++AA +++GSIGV+ Q P L Sbjct: 160 SSQVKRIKDKGVALTVCVDKVAASGGYMMACVADKLLAAPFAVLGSIGVVAQLPNFHRLL 219 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + +++ + K + F E K + + ++ ++ F V E+R P Sbjct: 220 KKHDIDYETLTAGEYKRTLTMFGENTDKGREKFTEDLEDTHELFKEFVKENR--PQLDID 277 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G +W G A + L+D + +E Sbjct: 278 AIATGEVWFGQRALEKNLVDELKTSDEYL 306 >gi|296137880|ref|YP_003645123.1| peptidase S49 [Tsukamurella paurometabola DSM 20162] gi|296026014|gb|ADG76784.1| peptidase S49 [Tsukamurella paurometabola DSM 20162] Length = 306 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 16/226 (7%) Query: 29 SHVEDNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLS 74 S + V + + G I + + + + D A A+ ++L+ Sbjct: 21 SALGQAGGVVPVVRLEGPIAAPALSGGLSSRGVLNLAGVETVLRKAFETDDAVAVALALN 80 Query: 75 SPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGGS E I I+++ + PV+ ++AAS GY ++CA++ I TS+VGSI Sbjct: 81 SPGGSPAQSELIGARIRQLAEKHDLPVLAFCEDVAASGGYWLACAADEIFVTSTSIVGSI 140 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ K ++K+G+ + + K F +V V+ + V + F Sbjct: 141 GVISASFGAKDLIEKIGLERRVFTAGESKHRLDMFEDVREADVEWLHGVQGDIHSAFRTW 200 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+E R L G +W GA+A ++GL D VG + Sbjct: 201 VTERRGARLGDDPALFTGEVWIGAKAVELGLADGVGTLRGTLADRF 246 >gi|254672356|emb|CBA05569.1| putative secreted protease [Neisseria meningitidis alpha275] Length = 366 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 102/228 (44%), Gaps = 10/228 (4%) Query: 26 SWSSHVEDNSPHVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSA 80 E + + G +E + I + I++ + +++ L SPGG Sbjct: 109 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLSIAKPED--EVLLRLESPGGVV 166 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +++++ R P+ V ++AAS GY+++C ++ IV+A ++VGS+GV+ + P Sbjct: 167 HGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVP 226 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 227 NIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR-- 284 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 285 PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 332 >gi|194097841|ref|YP_002000886.1| putative periplasmic protease [Neisseria gonorrhoeae NCCP11945] gi|193933131|gb|ACF28955.1| putative protease [Neisseria gonorrhoeae NCCP11945] Length = 368 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 111 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 167 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 168 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEV 227 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 228 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 286 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 287 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 334 >gi|152985660|ref|YP_001348823.1| putative periplasmic protease [Pseudomonas aeruginosa PA7] gi|150960818|gb|ABR82843.1| probable protease [Pseudomonas aeruginosa PA7] Length = 341 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 95/226 (42%), Gaps = 12/226 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V + G I+ S E+ + +DD +++ L S GG + Sbjct: 88 EQKSRVYVLDFDGDIKASATEQLRHEVTAVLSMAGKDDE---VVLRLESGGGMVHGYGLA 144 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ V ++AAS GY+++C I++A +++GSIGV+ Q P V L Sbjct: 145 ASQLARIRQAGVPLTVCVDKVAASGGYMMACIGERILSAPFAILGSIGVVAQLPNVHRLL 204 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + Q+ ++ ++ F V+ R P Sbjct: 205 KKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLEVTHELFKNFVAHYR--PQLNMD 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 ++ G +W G A L+D + +E +R ++ Sbjct: 263 EIATGEVWLGQAALGKLLVDELKTSDEYLAEQARERDVYQVRFVER 308 >gi|167626930|ref|YP_001677430.1| S49 family serine peptidase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596931|gb|ABZ86929.1| serine peptidase, S49 family [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 214 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 11/205 (5%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAET 126 IV ++SPGGS + I+ ++ ++ + P + ++ AS GY I+ + I A + Sbjct: 2 IVEINSPGGSPVQSDEIYSHMRYLQKKYPNIPMYAVCTDVCASGGYYIAAGAKDIYANKM 61 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++VGSIGV+ +DKLG+ ++ S K PFS P+ ++D ++ Sbjct: 62 TIVGSIGVIGSGFGFTGLMDKLGIERRTYTSGSNKDFLDPFSPERPEQTAQFNKLLDETH 121 Query: 187 HWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 F+R V +SR + G ++G +A+++GLID ++ + + Sbjct: 122 QVFIRAVEQSRGNRLKDKAIDTTFSGEPFSGIQAQRMGLIDGFASVNQLKRDKF------ 175 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSIS 269 + I D+ P ++ L S Sbjct: 176 NNLDIVDYTQPLDFLTAVSNKLGNS 200 >gi|53729128|ref|ZP_00134093.2| COG0616: Periplasmic serine proteases (ClpP class) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207496|ref|YP_001052721.1| putative periplasmic protease [Actinobacillus pleuropneumoniae L20] gi|126096288|gb|ABN73116.1| putative protease SohB [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 351 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IV+A +++GS+GV+ Q P + L K Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVSAPFAIIGSVGVVAQVPNIHRLLKK 218 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + E K Q Q ++ ++ F + V+++R P + Sbjct: 219 HEIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKI 276 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G +A + L+D + +++ Sbjct: 277 ATGEHWFGKQALALDLVDEINTSDDLL 303 >gi|71083320|ref|YP_266039.1| S49 family peptidase [Candidatus Pelagibacter ubique HTCC1062] gi|91762250|ref|ZP_01264215.1| Peptidase family S49 [Candidatus Pelagibacter ubique HTCC1002] gi|71062433|gb|AAZ21436.1| Peptidase family S49 [Candidatus Pelagibacter ubique HTCC1062] gi|91718052|gb|EAS84702.1| Peptidase family S49 [Candidatus Pelagibacter ubique HTCC1002] Length = 268 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 13/223 (5%) Query: 43 IRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 + G I ++ + E IE+ A A+ ++++SPGGS I++ I+ Sbjct: 16 LNGVIGNAGKFKQGIDFAGQEEIIEKAFSLKKAKAVAITINSPGGSPVQSHLIYKFIRAQ 75 Query: 94 --KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 KN+ VI ++AAS GYLI+CA + I A +S++GSIGV++ + K+GV Sbjct: 76 AKKNKIKVIVFAEDVAASGGYLIACAGDEIYANSSSIIGSIGVIYSSFGFTELIKKIGVE 135 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDG 210 + + K+ PF E + ++ ++++ + F+++V ESR K + L G Sbjct: 136 RRVHTAGKNKSSLDPFQEEKSEDIERLKNIQLDLHKDFIKVVEESRGSKLKKDGIELFSG 195 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV-DQSIRKIKDW 252 W G+++K++GLID +G E+ + + V + K K W Sbjct: 196 EFWAGSKSKELGLIDGLGNANEILKEKFGEDVIIKKFEKSKGW 238 >gi|239998326|ref|ZP_04718250.1| putative periplasmic protease [Neisseria gonorrhoeae 35/02] gi|240014504|ref|ZP_04721417.1| putative periplasmic protease [Neisseria gonorrhoeae DGI18] gi|240079709|ref|ZP_04724252.1| putative periplasmic protease [Neisseria gonorrhoeae FA19] gi|240113719|ref|ZP_04728209.1| putative periplasmic protease [Neisseria gonorrhoeae MS11] gi|240116462|ref|ZP_04730524.1| putative periplasmic protease [Neisseria gonorrhoeae PID18] gi|240121026|ref|ZP_04733988.1| putative periplasmic protease [Neisseria gonorrhoeae PID24-1] gi|240122343|ref|ZP_04735299.1| putative periplasmic protease [Neisseria gonorrhoeae PID332] gi|240125076|ref|ZP_04737962.1| putative periplasmic protease [Neisseria gonorrhoeae SK-92-679] gi|240127057|ref|ZP_04739718.1| putative periplasmic protease [Neisseria gonorrhoeae SK-93-1035] gi|254494474|ref|ZP_05107645.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441683|ref|ZP_05795499.1| putative periplasmic protease [Neisseria gonorrhoeae DGI2] gi|268599789|ref|ZP_06133956.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602133|ref|ZP_06136300.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268680929|ref|ZP_06147791.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268683671|ref|ZP_06150533.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268685412|ref|ZP_06152274.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|226513514|gb|EEH62859.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268583920|gb|EEZ48596.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586264|gb|EEZ50940.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268621213|gb|EEZ53613.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268623955|gb|EEZ56355.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268625696|gb|EEZ58096.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 350 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|327537611|gb|EGF24323.1| signal peptide peptidase SppA, 36K type [Rhodopirellula baltica WH47] Length = 397 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 123/319 (38%), Gaps = 53/319 (16%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLS 74 ++ D+ +A + + G + D E++ I D + A+++ ++ Sbjct: 69 NAKSSDSQSRIAIVDVDGLLIDQNFSGFGSMGENPVSLFREKMRHIESDPTILAVVLRIN 128 Query: 75 SPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG A + + ++ +K+ + PV+ + Y ++ ++ IVA TS+VG I Sbjct: 129 SPGGGVTASDMLAHQLKHLKSNRNIPVVACLMTTGTGGAYYLATHADAIVAHPTSVVGGI 188 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ ++ L + + +KS SP + + ++Q + D + F+ Sbjct: 189 GVILNNYNMEDTLGQFNIVSLPIKSGDKIDVGSPERMMQREERDLLQSMADEFHQRFIEQ 248 Query: 193 VSESRN-------------IPYDKTLVL----------------------SDGRIWTGAE 217 V SR + L DGR+ +G Sbjct: 249 VRSSRGERLVVTSEVDESNLDESDANKLDAGDLDRDDVDDAELKPSELIPFDGRVVSGLH 308 Query: 218 AKKVGLIDVVGGQEEVWQ---SLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 A+K+GL+D G ++ + L ++ ++ N F N+ ++S+L Sbjct: 309 AQKIGLVDQTGYLDDAVSLAGRMAGLSSSPALVLLRRDNDRAMSEFDVTPNVPMTSILPI 368 Query: 275 TIPLMKQTKVQGLWAVWNP 293 +P + ++ + +W P Sbjct: 369 QLPGLDRSSMPTFLYLWQP 387 >gi|153838850|ref|ZP_01991517.1| peptidase S49 [Vibrio parahaemolyticus AQ3810] gi|149747734|gb|EDM58634.1| peptidase S49 [Vibrio parahaemolyticus AQ3810] Length = 295 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 10/203 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVGSLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLI 224 + ++ G W G +AK++GL+ Sbjct: 273 LELEKVATGEHWFGTQAKELGLV 295 >gi|24214911|ref|NP_712392.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] gi|24195940|gb|AAN49410.1| periplasmic serine protease [Leptospira interrogans serovar Lai str. 56601] Length = 579 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 18/259 (6%) Query: 31 VEDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSP 76 V VA + ++G I + E ++ + ++ S A+I+ + SP Sbjct: 283 VSQKESVVAVLPLKGNIHHDTIGKGEGKTDGISYYSIKEALKELKKESSVKAVILEVDSP 342 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA+ E +++ I K++ +KPV + ++AS GY +SC ++ I A+ +VGSIG + Sbjct: 343 GGSAFVSELLYQEILKLQKKKPVYAYIQNISASGGYYLSCGASKIYASPYGIVGSIGSIS 402 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +K KLG++ V + S + ++P++ ++M+ + S F + VS+S Sbjct: 403 IRFDLKNLYSKLGITKDRVGFYKYRDLLSEYGPIHPESKKLMEQEIKESEGLFYKRVSDS 462 Query: 197 RNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R IP G+++T ++ K +ID + + L + D + K++ P Sbjct: 463 RKIPISDLDKRFGQGKVFTSSQFLKERMIDSI---TDFLSLLEDIKQDLKVEKVQVRYLP 519 Query: 256 KNYWFCDLKNLSISSLLED 274 + F L + Sbjct: 520 SLFTFQSFLKSLKPGFLSN 538 >gi|221134638|ref|ZP_03560941.1| putative periplasmic protease [Glaciecola sp. HTCC2999] Length = 371 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 12/218 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 S S P + I G ++ + E+ + D ++V++ S GG Sbjct: 113 SSGSVESAQKPRLFVIDFNGSVDAHEVDNFREEITAVLLAAKSSDE---VLVNVESGGGV 169 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + ++++K + + V ++AAS GY+++C ++ +V A +++GSIGV+ Q Sbjct: 170 VHGYGLAASQLERIKAKGLKLTICVDKVAASGGYMMACVADKLVCANFAIIGSIGVIAQM 229 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P L K + + + K + F E N + + ++ + F V+ +R Sbjct: 230 PNFNKLLKKNDIEFEQHTAGDFKRTLTVFGENNDEGRAKFKAELEEVHVMFKDFVTRNR- 288 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 P ++ G W G +A ++GL+D + ++V + Sbjct: 289 -PTLDISKVATGEYWFGMQALELGLVDELSTSDDVLLA 325 >gi|254448773|ref|ZP_05062230.1| probable protease SohB [gamma proteobacterium HTCC5015] gi|198261614|gb|EDY85902.1| probable protease SohB [gamma proteobacterium HTCC5015] Length = 354 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 10/220 (4%) Query: 37 HVARIAIRGQIEDSQELIERIERISR-----DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 V + G I+ S ++ + S ++V L S GG ++ + Sbjct: 105 RVFVLDFDGDIKASA--VDHLREAVSGVLTMARSEDEVVVRLESAGGMVHSYGLASSQLL 162 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ ++ P+ V ++AAS GY+++C +N IVAA +++GSIGV+ Q P L K + Sbjct: 163 RIRQKELPLTICVDKVAASGGYMMACVANHIVAAPFAILGSIGVVAQIPNFHRVLKKHDI 222 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E K + ++ ++ ++ F V E+R P ++ G Sbjct: 223 DFELITAGEHKRTLTMFGENTDKGREKFREDIEDTHGLFKDFVQENR--PAVPIDAVATG 280 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 +W G++A + LID + +E + +R ++ Sbjct: 281 EVWFGSKALEQQLIDKIATSDEYLMNACEDADVYEVRFVE 320 >gi|77459336|ref|YP_348843.1| putative periplasmic protease [Pseudomonas fluorescens Pf0-1] gi|77383339|gb|ABA74852.1| inner membrane peptidase. Serine peptidase. MEROPS family S49 [Pseudomonas fluorescens Pf0-1] Length = 340 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 12/214 (5%) Query: 33 DNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 D P V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 88 DAKPRVFVLDFDGDIKASATESLRHEITALLTLATPKDE---VVLRLESGGGMVHSYGLA 144 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ + ++AAS GY+++C I++A +++GSIGV+ Q P V L Sbjct: 145 SSQLARIREAGVPLTVCIDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLPNVNRLL 204 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + Q+ +D ++ F V+ R P Sbjct: 205 KKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKNFVARYR--PQLAID 262 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G +W G A + L+D + +E Sbjct: 263 EVATGEVWLGIAALEKQLVDELKTSDEYLAERAK 296 >gi|45657584|ref|YP_001670.1| protease IV [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600823|gb|AAS70307.1| protease IV [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 579 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 18/259 (6%) Query: 31 VEDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSP 76 V VA + ++G I + E ++ + ++ S A+I+ + SP Sbjct: 283 VSQKESVVAVLPLKGNIHHDTIGKGEGKTDGISYYSIKEALKELKKESSVKAVILEVDSP 342 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGSA+ E +++ I K++ +KPV + ++AS GY +SC ++ I A+ +VGSIG + Sbjct: 343 GGSAFVSELLYQEILKLQKKKPVYAYIQNISASGGYYLSCGASKIYASPYGIVGSIGSIS 402 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 +K KLG++ V + S + ++P++ ++M+ + S F + VS+S Sbjct: 403 IRFDLKNLYSKLGITKDRVGFYKYRDLLSEYGPIHPESKKLMEQEIKESEGLFYKRVSDS 462 Query: 197 RNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 R IP G+++T ++ K +ID + + L + D + K++ P Sbjct: 463 RKIPISDLDKRFGQGKVFTSSQFLKERMIDSI---TDFLSLLEDIKQDLKVEKVQVRYLP 519 Query: 256 KNYWFCDLKNLSISSLLED 274 + F L + Sbjct: 520 SLFTFQSFLKSLKPGFLSN 538 >gi|261415381|ref|YP_003249064.1| signal peptide peptidase SppA, 36K type [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371837|gb|ACX74582.1| signal peptide peptidase SppA, 36K type [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327693|gb|ADL26894.1| signal peptide peptidase SppA domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 764 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 5/222 (2%) Query: 33 DNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 ++ VA + I G I+ + +++ + R+ AL+V +SSPGGSA A + I+ A+ Sbjct: 501 NHRAKVALLNINGTIDSRMEESVLDNLRRLPGM-GVKALLVRISSPGGSAIASDKIWGAL 559 Query: 91 QKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + ++ P++ + S Y I+C ++ I+A ++VGSIG+ + K+G Sbjct: 560 KNLRRFDIPIVASIGSSGTSGAYYIACGADKIIAEPFAIVGSIGIYGGKIDASGLMQKVG 619 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-S 208 + + VK++ S +Q+ +D Y+ F +VS++ I + Sbjct: 620 LRNEPVKTNDYSDARSFARPWTDTEKAALQEYMDDFYNRFTGVVSQATGIDQAVVDSVYG 679 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 GR+ G +AK+ GL+ +GG ++ + L +I+ Sbjct: 680 GGRVMVGWKAKEAGLVHSLGGFDDALDEVRKLADIPKSTEIE 721 Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 93/223 (41%), Gaps = 15/223 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASA 110 ++ E + RD +A +++ S G+ E I R ++K+K R VI + ++ S Sbjct: 279 KVRNLFEHLLRDPAAGLVVLDFSGYNGNLAISEEINRYVKKLKARGGLVIAYMDDVRPS- 337 Query: 111 GYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 +++ A+ + +V ++ +G+ + K LDKLGV ++ ++ K+ P++ Sbjct: 338 --VLTAAANVDRVVVEPSAHFTWLGLGGGITFYKGILDKLGVKVEFLRHGAFKSAVEPYT 395 Query: 169 E--VNPKAVQMMQDVVDSSYHWFVRLVSESRN-----IPYDKTLVLSDGRIWTGAEAKKV 221 ++ A + ++ + + V+ + +K L+ + T AKK Sbjct: 396 ADSMSVNARENIETLYKDIWELVRMRVAARMKTGTAPVNTEKLDELAQKPVITAIGAKKA 455 Query: 222 GLIDVVGGQEEVWQSLYA--LGVDQSIRKIKDWNPPKNYWFCD 262 GL D + ++V +D + W P F + Sbjct: 456 GLADTLLYIDQVPAYALKTFFDIDAPYAGFRTWAPSNTKIFDE 498 >gi|88859935|ref|ZP_01134574.1| protease (may metabolize cleaved signal peptides) [Pseudoalteromonas tunicata D2] gi|88817929|gb|EAR27745.1| protease (may metabolize cleaved signal peptides) [Pseudoalteromonas tunicata D2] Length = 337 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 9/211 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA-----TALIVSLSSPGGSAYAGE 84 D V + G I D++E+ E E I+ + +++ L S GG + Sbjct: 82 QKNDVKNKVYVLDFNGSI-DAREVDELREEITAILTVAQAGKDQVLLRLESGGGVVHGYG 140 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 ++++KN + V ++AAS GY+++C ++ +VAA +++GSIGV+ Q P Sbjct: 141 LAASQLERIKNAGINLTVCVDKVAASGGYMMACVADKVVAAPFAIIGSIGVIAQIPNFNK 200 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + + K + F E +A ++ + ++ F + VS R P Sbjct: 201 ILKKNDIEFEQITAGEFKRTLTLFGENTDQARDKFREEIQQTHELFKQFVSLKR--PTLD 258 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W ++A + GL+D + ++V Sbjct: 259 LTEVATGEHWFASQAIEKGLVDEIATSDDVL 289 >gi|116331019|ref|YP_800737.1| Signal peptide peptidase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124708|gb|ABJ75979.1| Signal peptide peptidase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 583 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 21/255 (8%) Query: 36 PHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 P VA + ++G I + ++ + + S A+++ + SPGGSA+ Sbjct: 286 PVVAVLPLKGTIHHDTIGKGEGKTEGISYYSVRNALKELRDESSVKAVVLEVDSPGGSAF 345 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E +++ I K++ +KPV V ++AS GY +SC ++ I A+ +VGSIG L + Sbjct: 346 VSELLYQEILKLQKKKPVYAYVQNVSASGGYYLSCGASKIYASPYGIVGSIGSLSLRLDL 405 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 K F KLGV+ V + S + ++P++ ++M+ + S F + V+++R IP Sbjct: 406 KNFYSKLGVTKDRVGFYKYRDLLSEYGPIHPESRKLMRQEIKESEGLFYKRVADARKIPI 465 Query: 202 DKTLV-LSDGRIWTGAEAKKVGLIDVV----GGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 GR++T + K +ID + G E++ Q L + IR + + Sbjct: 466 STLDKRFGQGRVFTSSRFLKEKMIDSITDFLGLLEDIKQELKTQRL--EIRYLPTLFTFQ 523 Query: 257 NYWFCDLKNLSISSL 271 N+ I+ L Sbjct: 524 NFLRSLKPGFLINRL 538 Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Query: 86 IFRAIQKVKNRKPVITEVHEMAASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I ++ +K + A + G +L+ N ++E+S + + + Sbjct: 98 IAERLRILKESG---ITLEGFALTGGLKSLFLLGI-CNERFSSESSEFFPVLPSTESFFF 153 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQ----MMQDVVDSSYHWFVR 191 K G+ +++ +S P K+ F + +PKA + +++ ++D F R Sbjct: 154 GNAGKKWGIKVETFQSGPYKSFGESFQRDKFSPKARENLNSLLRQMMDDLDLLFKR 209 >gi|116328293|ref|YP_798013.1| Signal peptide peptidase (protease IV) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121037|gb|ABJ79080.1| Signal peptide peptidase (protease IV) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 582 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 21/255 (8%) Query: 36 PHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 P VA + ++G I + ++ + + S A+++ + SPGGSA+ Sbjct: 286 PVVAVLPLKGTIHHDTIGKGEGKTEGISYYSVRNALKELRDESSVKAVVLEVDSPGGSAF 345 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 E +++ I K++ +KPV V ++AS GY +SC ++ I A+ +VGSIG L + Sbjct: 346 VSELLYQEILKLQKKKPVYAYVQNVSASGGYYLSCGASKIYASPYGIVGSIGSLSLRLDL 405 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 K F KLGV+ V + S + ++P++ ++M+ + S F + V+++R IP Sbjct: 406 KNFYSKLGVTKDRVGFYKYRDLLSEYGPIHPESRKLMRQEIKESEGLFYKRVADARKIPI 465 Query: 202 DKTLV-LSDGRIWTGAEAKKVGLIDVV----GGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 GR++T + K +ID + G E++ Q L + IR + + Sbjct: 466 STLDKRFGQGRVFTSSRFLKEKMIDSITDFLGLLEDIKQELKTQRL--EIRYLPTLFTFQ 523 Query: 257 NYWFCDLKNLSISSL 271 N+ I+ L Sbjct: 524 NFLRSLKPGFLINRL 538 Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Query: 86 IFRAIQKVKNRKPVITEVHEMAASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I ++ +K + A + G +L+ N ++E+S + + + Sbjct: 98 IAERLRILKESG---ITLEGFALTGGLKSLFLLGI-CNERFSSESSEFFPVLPSTESFFF 153 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQ----MMQDVVDSSYHWFVR 191 K G+ +++ +S P K+ F + +PKA + +++ ++D F R Sbjct: 154 GNAGKKWGIKVETFQSGPYKSFGESFQRDKFSPKARENLNSLLRQMMDDLDLLFKR 209 >gi|293399691|ref|ZP_06643843.1| serine protease SohB [Neisseria gonorrhoeae F62] gi|291609942|gb|EFF39065.1| serine protease SohB [Neisseria gonorrhoeae F62] Length = 359 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 102 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 158 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 159 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSVGVVAEV 218 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 219 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 277 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 278 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 325 >gi|332978457|gb|EGK15170.1| protease SohB [Psychrobacter sp. 1501(2011)] Length = 332 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 10/212 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAG 83 + V + G I+ S ++ + IS + +++ L S GG + Sbjct: 57 GKSKQKEKRVFVLDFDGDIKASA--VKYLREEISAIISTANKGDEVVLRLESGGGMVHGY 114 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K + V ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 115 GLAAAQLVRLKEAGLTLTVCVDKIAASGGYMMACVADKILAAPFAVVGSIGVVSQMPNFN 174 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +L K + + + K + F E + + ++ ++ ++ F V+ R P Sbjct: 175 KWLKKHDIDYEMFTAGEYKRTVTMFGENDEEDRAKYKEELEQTHELFKHFVTTYR--PQL 232 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +++G W G +A K+ L+D + + Sbjct: 233 DLSKVANGDHWYGEDALKLNLVDELSTSDAYL 264 >gi|296395336|ref|YP_003660220.1| peptidase S49 [Segniliparus rotundus DSM 44985] gi|296182483|gb|ADG99389.1| peptidase S49 [Segniliparus rotundus DSM 44985] Length = 291 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 110/273 (40%), Gaps = 21/273 (7%) Query: 35 SPHVARIAIRGQI-----------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 V+ + + G I ++Q L + A A+ + ++SPGGS Sbjct: 24 GKTVSVVRLEGVIRAGGGPFGRGALNAQNLEAPLVDAFSASEAVAVAIVINSPGGSPAQS 83 Query: 84 EAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I+++ K+ KPV+ ++AAS GY ++CA++ I + +++GSIGV+ + Sbjct: 84 ALVGDRIRQLSAKHEKPVLAFCEDVAASGGYWLACAADEIFVSPGTVIGSIGVVSSSFGL 143 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 ++KLG+ + + K PF + V + + + F+ V R Sbjct: 144 TEAIEKLGLERRVHAAGTNKVRLDPFLPEKEEDVSWLSGMQADIHQVFIDWVKTRRGAKL 203 Query: 202 D-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 K L + +W G A ++G+ D VG V + I+ P + Sbjct: 204 AGKDDELFNADVWIGKRAVELGVADAVGSLHSVLAERFPEAKPHEIK------PKQQLLQ 257 Query: 261 CDLKNLSISSL-LEDTIPLMKQTKVQGLWAVWN 292 S+ + L ++ + + +W+ + Sbjct: 258 RLGLTASVEDMTLRALDGVVCAVERRAMWSRFG 290 >gi|15677437|ref|NP_274593.1| putative periplasmic protease [Neisseria meningitidis MC58] gi|7226836|gb|AAF41940.1| putative protease [Neisseria meningitidis MC58] Length = 367 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 110 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 166 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ I +A ++VGS+GV+ + Sbjct: 167 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIASAPFAIVGSVGVVAEV 226 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 227 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 285 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 286 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 333 >gi|304386997|ref|ZP_07369255.1| protease SohB [Neisseria meningitidis ATCC 13091] gi|304338954|gb|EFM05050.1| protease SohB [Neisseria meningitidis ATCC 13091] Length = 366 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 109 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 165 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ I +A ++VGS+GV+ + Sbjct: 166 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIASAPFAIVGSVGVVAEV 225 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 226 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 284 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 285 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 332 >gi|46402091|ref|YP_006585.1| putative head maturation protease [Klebsiella phage phiKO2] gi|40218235|gb|AAR83021.1| putative head maturation protease [Klebsiella phage phiKO2] Length = 306 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 16/228 (7%) Query: 26 SWSSHVEDNSPHVARIAI-------RGQIEDS-------QELIERIERISRDDSATALIV 71 S S V+ VA I + RGQI + + + ++ D S + +++ Sbjct: 57 SASEQVQPAGG-VAVIPVHGLLVARRGQITQACTELTSYERIRSQLTAALNDPSISEIVL 115 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++S GG+A + + I + + KP+ V+ A SA Y I+ A + I+ ++TS VGS Sbjct: 116 DINSGGGAAVGCKELADYIYQSRETKPITAIVNYNAFSAAYFIASACSKIIVSQTSGVGS 175 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ ++ +K+G++ ++ K + ++ +A M Q ++D Y F Sbjct: 176 IGVIMEHLDTSKLEEKMGLTFTTIFRGDNKNNGTQHEPLSEEAQAMFQGMIDEMYETFTG 235 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+E R + + +V + ++ G A GL D + + ++ A Sbjct: 236 SVAEYRGLDR-QVVVDTQAGLYFGPGAVSAGLADEISDPQSAINAIAA 282 >gi|329894909|ref|ZP_08270708.1| peptidase S49 [gamma proteobacterium IMCC3088] gi|328922638|gb|EGG29973.1| peptidase S49 [gamma proteobacterium IMCC3088] Length = 351 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 6/207 (2%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSA-TALIVSLSSPGGSAYAGEAIFRAIQ 91 P V + G I+ S + L + I + + + +I+ L SPGG ++ + Sbjct: 102 RPRVFVMDFDGDIKASAVEGLRKEISTLVANKAEGDTVILRLESPGGMVHSYGLAASQLD 161 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++KN +I V +AAS GY+++C ++ I AA S++GSIGV+ Q P V L K V Sbjct: 162 RIKNAGIKLIVSVDAVAASGGYMMACVADEIAAAPFSVIGSIGVVAQVPNVHRLLKKNDV 221 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + + K + E + Q + ++S++ F V E R P ++ G Sbjct: 222 DVEILTAGKYKRTLTVLGENTEEGRQKFIEDLESTHDLFKAFVQEHR--PNLDIEAVATG 279 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSL 237 IW G EA GL+D + +++ Sbjct: 280 EIWYGKEAVNKGLVDRIATSDDLILEA 306 >gi|117620350|ref|YP_857606.1| putative periplasmic protease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561757|gb|ABK38705.1| peptidase, S49 (protease IV) family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 335 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 11/232 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGE 84 + ED + I G D++E+ E +S +++ L S GG + Sbjct: 82 AKSEDARSRLFVIDFHGS-MDAKEVASLREEVSAVIGVAQPGDEVLLRLESGGGVVHGYG 140 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q++++R + + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 141 LAASQLQRLRDRDIKLTVAIDKVAASGGYMMACVADQILAAPFAIVGSIGVIAQLPNFNK 200 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + K + F E + + + ++ + + + F V+E R P Sbjct: 201 LLKKHDIEFEMHTAGQYKRTITMFGENDEQGREKFREELGAIHERFKAFVAEHR--PNLD 258 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ G W ++AK++GL+D + ++ L A + I+ P Sbjct: 259 IDSVTTGEHWLASQAKQLGLVDSLCTSDD---YLLAQASQHKVVGIRYSKPK 307 >gi|109898498|ref|YP_661753.1| putative periplasmic protease [Pseudoalteromonas atlantica T6c] gi|109700779|gb|ABG40699.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Pseudoalteromonas atlantica T6c] Length = 344 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 10/240 (4%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +D ++ I G ++ + E + I I++ ++V L S GG + Sbjct: 92 DDEKGNLYVIDFNGSMDAHEVDNLREEVTAIICIAKPKD--EVLVRLESGGGVVHGYGLA 149 Query: 87 FRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q++K++ P+ V ++AAS GY+++C ++ ++AA+ +++GSIGV+ Q P L Sbjct: 150 ASQLQRLKDKDIPLTVAVDKVAASGGYMMACVADNVLAAKFAIIGSIGVIAQIPNFNKLL 209 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + K + F E + + + +D ++ + F V E R P Sbjct: 210 KKNDIEFEQHTAGQFKRTLTMFGENSDEGREKFRDELEDVHQMFKGFVQEHR--PALAID 267 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ G W G++A +GL+D + ++ + S++ N + + K Sbjct: 268 TVATGEYWYGSKALDLGLVDTIQTSDDFLLDANNVKKIYSVKYSVKKNLAEKFGISVTKG 327 >gi|315126452|ref|YP_004068455.1| periplasmic protease [Pseudoalteromonas sp. SM9913] gi|315014966|gb|ADT68304.1| putative periplasmic protease [Pseudoalteromonas sp. SM9913] Length = 338 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 9/214 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + E+ + I G ++ + E + I I+ D ++V L S GG + Sbjct: 82 AEKEEPKSRLYVIDFNGSMDAHEVESLREEVTAIISIA-DPKKDKVLVRLESGGGVVHGY 140 Query: 84 EAIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q+ K+ + + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 141 GLAASQLQRFKSAGIELTVSIDKVAASGGYMMACVADHIIAAPFAIVGSIGVIAQIPNFN 200 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K V + + + K + F E KA + ++ ++ ++ F VS R P Sbjct: 201 KILKKNDVDFEQITAGEFKRTLTLFGENTDKAREKFREEIEQTHVLFKTFVSTQR--PSL 258 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +++ G W +A + GL+D + ++ Sbjct: 259 NMDLVATGEHWFATQAIEKGLVDTIKTSDDALLE 292 >gi|212213146|ref|YP_002304082.1| putative periplasmic protease [Coxiella burnetii CbuG_Q212] gi|212011556|gb|ACJ18937.1| non-proteolytic protein, peptidase family S49 [Coxiella burnetii CbuG_Q212] Length = 338 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 111/255 (43%), Gaps = 15/255 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERIS 61 IK +Y + + + + + + +G I S +E+ + + Sbjct: 69 IKDKYELKRFLKSQKKEKKKKPNTTEAKKRIFVLNFQGDIRASAVCALREEITAVLTTAT 128 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNI 120 RDD +++ L S GG + +Q++K+ ++ + ++A S GYL++C ++ Sbjct: 129 RDDE---VLLRLESGGGVVHGYGLAASQLQRIKDAHIKLVIAIDKVAVSGGYLMACVADR 185 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I+AA ++VGSIGVL Q P +L K + + V + K + F E K M++ Sbjct: 186 IIAAPFAIVGSIGVLAQLPNFHRYLRKKYIDFEQVMAGDYKRTLTLFGENTEKGRAKMKE 245 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ ++ F + E R ++ G W ++A + L+D + ++ L A Sbjct: 246 EVEETHTLFKSFIKEHRQ--EVDVEQIATGEHWYASKALDLRLVDELKTSDD---YLLAA 300 Query: 241 GVDQSIRKIKDWNPP 255 + + +++ P Sbjct: 301 SQNYDLFEVQYKRKP 315 >gi|59801605|ref|YP_208317.1| putative periplasmic protease [Neisseria gonorrhoeae FA 1090] gi|59718500|gb|AAW89905.1| putative serine protease [Neisseria gonorrhoeae FA 1090] Length = 350 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|327480845|gb|AEA84155.1| putative periplasmic protease [Pseudomonas stutzeri DSM 4166] Length = 340 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 101/241 (41%), Gaps = 14/241 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + S V + G I S E+ + + D +++ L S GG + Sbjct: 83 TKKSETSARVFVLDFDGDIRASAVENLRHEITALLTMATPQDE---VVLRLESGGGMVHG 139 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++++ P+ V ++AAS GY+++C N I+ A +++GSIGV+ Q P V Sbjct: 140 YGLAASQLVRIRDAGVPLTVCVDKVAASGGYMMACIGNRILTAPFAILGSIGVVAQLPNV 199 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIP 200 L K V + + + K + F E K + Q+ +D+++ F V+ R N+ Sbjct: 200 HRLLKKHDVDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDTTHELFKNFVARYRQNLS 259 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 D ++ G +W G A L D + ++ + I+ + P+ + Sbjct: 260 IDD---VATGEVWLGIAALGKHLADELKTSDQYLAERAQEAELFQLHYIQKKSLPERFGM 316 Query: 261 C 261 Sbjct: 317 A 317 >gi|145570793|gb|ABP79899.1| probable protease [Pseudomonas stutzeri A1501] Length = 360 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 14/241 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + S V + G I S E+ + + D +++ L S GG + Sbjct: 103 TKKSETSARVFVLDFDGDIRASAVENLRHEITALLTMATPQDE---VVLRLESGGGMVHG 159 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++++ P+ V ++AAS GY+++C N I+ A +++GSIGV+ Q P V Sbjct: 160 YGLAASQLVRIRDAGVPLTVCVDKVAASGGYMMACIGNRILTAPFAILGSIGVVAQLPNV 219 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIP 200 L K V + + + K + F E K + Q+ +++++ F V+ R N+ Sbjct: 220 HRLLKKHDVDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHELFKNFVARYRQNLS 279 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 D ++ G +W G A L D + ++ + I+ + P+ + Sbjct: 280 IDD---VATGEVWLGIAALGKHLADELKTSDQYLAERAQEAELFQLHYIQKKSLPERFGM 336 Query: 261 C 261 Sbjct: 337 A 337 >gi|161870442|ref|YP_001599614.1| putative periplasmic protease [Neisseria meningitidis 053442] gi|161595995|gb|ABX73655.1| serine protease SohB [Neisseria meningitidis 053442] gi|316983835|gb|EFV62815.1| peptidase family S49 family protein [Neisseria meningitidis H44/76] gi|319410803|emb|CBY91190.1| putative peptidase [Neisseria meningitidis WUE 2594] gi|325140763|gb|EGC63277.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis CU385] gi|325199814|gb|ADY95269.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis H44/76] Length = 350 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ I +A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIASAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|152981533|ref|YP_001354400.1| phage related peptidase [Janthinobacterium sp. Marseille] gi|151281610|gb|ABR90020.1| phage related peptidase [Janthinobacterium sp. Marseille] Length = 406 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + I G + QEL ++ D + A+++ + S GG + Sbjct: 58 IAVLPIYGTLVRRTVGLEAESGMASYQELATMLDTAVADPNVAAILLDIDSAGGESGGVF 117 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + + RKPV ++MA SA Y I A++ + T VGSIGV+ + Sbjct: 118 DLADRVAAAAKRKPVWALANDMAFSAAYAIGSAASRFIVTRTGGVGSIGVIAMHADQSVK 177 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K GV +V + K + +P ++ +A +++ V+ Y FV V+ +R + D Sbjct: 178 DAKDGVRYTTVFAGARKNDLNPHEPISDEAHAFLKNEVERVYGLFVETVARNRGVSADAV 237 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ I+ GA+A GL D VG ++V Sbjct: 238 RA-TEASIYYGADAVAAGLADAVGTFDDVLAEFTE 271 >gi|78485025|ref|YP_390950.1| peptidase S49 [Thiomicrospira crunogena XCL-2] gi|78363311|gb|ABB41276.1| protein C. Serine peptidase. MEROPS family S49 [Thiomicrospira crunogena XCL-2] Length = 463 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 14/214 (6%) Query: 37 HVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ I I G + + Q++ E + + DD+ +++ SPGGSA Sbjct: 71 NIGVIDISGPMVNRPIRGFCSNGPAAYQDIKEDFDELMADDNIKTIVLRCDSPGGSASGV 130 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I + +K +I V +MA SA Y I+ A + I + TS +GSIGV+ + Sbjct: 131 MDLSDHIFNSRGQKKIIAIVDDMAYSAMYAIASACDEIYVSRTSGIGSIGVVTYHIDQSE 190 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 F K+GV ++ + + K +P ++ +A MQ +D Y FV V+ +RN+ K Sbjct: 191 FDKKIGVKVEFIYAGDKKVAGNPHEPLSDQARTDMQTEIDRLYDIFVATVARNRNMDEQK 250 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + G VGL D +G EV +L Sbjct: 251 VRD-TQAGCFYGDTGIAVGLADKLGTFSEVIGNL 283 >gi|332533580|ref|ZP_08409442.1| SohB protein, peptidase U7 family [Pseudoalteromonas haloplanktis ANT/505] gi|332036982|gb|EGI73441.1| SohB protein, peptidase U7 family [Pseudoalteromonas haloplanktis ANT/505] Length = 338 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 7/216 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERIS--RDDSATALIVSLSSPGGSAY 81 S + ++ P + I G ++ + + L E I I + S +++ L S GG + Sbjct: 79 SKKADKDELKPRLYVIDFVGSMDAHEVESLREEITAIISIANPSKDKVLIRLESGGGVVH 138 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +Q++KN P+ + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 139 GYGLAASQLQRIKNAGIPLSVAIDKVAASGGYMMACVADEILAAPFAIVGSIGVIAQIPN 198 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K V + + + K + F E KA + ++ ++ ++ F VS R P Sbjct: 199 FNKILKKNDVEFEQITAGEFKRTLTLFGENTDKAREKFREEIEQTHDLFKTFVSTQR--P 256 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +++ G W +A GL+DV+ ++ Sbjct: 257 SLDINLVATGEHWFATQAIDKGLVDVIKTSDDALLE 292 >gi|240016949|ref|ZP_04723489.1| putative periplasmic protease [Neisseria gonorrhoeae FA6140] gi|240117127|ref|ZP_04731189.1| putative periplasmic protease [Neisseria gonorrhoeae PID1] gi|268602813|ref|ZP_06136980.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268586944|gb|EEZ51620.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] Length = 350 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 99/229 (43%), Gaps = 12/229 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSAETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLIRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+ V ++AAS GY+++C ++ IV+A +++GS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEV 209 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + L K + + + + K + E K Q + ++ ++ F + VSE+R Sbjct: 210 PNIHRLLKKHDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENR- 268 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 P ++ G W G +A + LID + +++ + ++ Sbjct: 269 -PGLDIEKIATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 316 >gi|59711647|ref|YP_204423.1| putative periplasmic protease [Vibrio fischeri ES114] gi|59479748|gb|AAW85535.1| predicted inner membrane peptidase [Vibrio fischeri ES114] Length = 353 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 8/206 (3%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRAIQK 92 + + G I D++E+ E +S + +++ L S GG + + + Sbjct: 106 RLFVLDFNGSI-DAKEVAALREEVSAILAVAIEGDEVLLRLESGGGMVHGYGLASSQLDR 164 Query: 93 VKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++ + V ++AAS GY+++C I+AA ++VGSIGV+ Q P L K + Sbjct: 165 LRDANIKLTISVDKVAASGGYMMACIGEKIIAAPFAIVGSIGVVAQLPNFNKLLKKNDIE 224 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + F E + KA + Q ++ ++ F + E R ++ G Sbjct: 225 FEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHVLFKDFIREHR--SELDLEKVATGE 282 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 W G +A ++GLID + ++ Sbjct: 283 HWFGKQALELGLIDEIQTSDDYLTKA 308 >gi|87121325|ref|ZP_01077215.1| peptidase, U7 family protein [Marinomonas sp. MED121] gi|86163482|gb|EAQ64757.1| peptidase, U7 family protein [Marinomonas sp. MED121] Length = 348 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 18/252 (7%) Query: 29 SHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 S V + + + G I+ S +E+ + S DD ++V L S GG + Sbjct: 92 SSVIETKKRLFVLDFDGDIQASATQTLRREITAVLSVASADDE---VVVRLESGGGVVHG 148 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q++K+ P+ V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + Sbjct: 149 YGLAASQLQRIKDANLPLTICVDKVAASGGYMMACVADKIIAAPFAILGSIGVVAQVPNI 208 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 LDK V ++ + K + E + + + ++ ++ F VS +R P Sbjct: 209 HRLLDKSLVDVELHTAGKYKRTLTMLGENTDEGREKFKQDLEDTHVLFKEFVSSAR--PV 266 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ G +W G++A K L+D V + S + S+R + PK Sbjct: 267 IDIEAIATGDVWYGSQALKNNLVDQVSTSDAYLVSHFDSADVVSVR----YQEPKK--LA 320 Query: 262 DLKNLSISSLLE 273 + LS+ S LE Sbjct: 321 EKLGLSVLSALE 332 >gi|229577462|ref|YP_001172741.2| putative periplasmic protease [Pseudomonas stutzeri A1501] Length = 340 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 14/241 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + S V + G I S E+ + + D +++ L S GG + Sbjct: 83 TKKSETSARVFVLDFDGDIRASAVENLRHEITALLTMATPQDE---VVLRLESGGGMVHG 139 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++++ P+ V ++AAS GY+++C N I+ A +++GSIGV+ Q P V Sbjct: 140 YGLAASQLVRIRDAGVPLTVCVDKVAASGGYMMACIGNRILTAPFAILGSIGVVAQLPNV 199 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIP 200 L K V + + + K + F E K + Q+ +++++ F V+ R N+ Sbjct: 200 HRLLKKHDVDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLETTHELFKNFVARYRQNLS 259 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 D ++ G +W G A L D + ++ + I+ + P+ + Sbjct: 260 IDD---VATGEVWLGIAALGKHLADELKTSDQYLAERAQEAELFQLHYIQKKSLPERFGM 316 Query: 261 C 261 Sbjct: 317 A 317 >gi|149377455|ref|ZP_01895198.1| Periplasmic serine protease (ClpP class) [Marinobacter algicola DG893] gi|149358296|gb|EDM46775.1| Periplasmic serine protease (ClpP class) [Marinobacter algicola DG893] Length = 354 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 13/254 (5%) Query: 28 SSHVEDNSPHVARIAIRGQI--EDSQELIERIERIS--RDDSATALIVSLSSPGGSAYAG 83 E P V + G I D+ L I + + +++ L S GG ++ Sbjct: 96 GDAEEKPRPKVYVLDFDGDIKASDTDSLRRSITAVLSVAEPETDEVVIRLESGGGLVHSY 155 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ + + V ++AAS GY+++C ++ IVA+ +++GSIGV+ Q P Sbjct: 156 GLAAAQLDRIRAKGIRLTACVDKVAASGGYMMACVADRIVASPFAILGSIGVVAQLPNFH 215 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL K V + + + K + F E K + ++ ++ F V E R P Sbjct: 216 RFLKKNDVDFEILTAGEHKRTMTVFGENTDKGRTKFLEDLEDTHVLFKEYVGERR--PEL 273 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 +++G IW G A +V L+D + +E S+ + P+ Sbjct: 274 DIAAVANGDIWFGRRALEVKLVDEIKTSDEFLIEACDRADVISVGFQRKRTLPEK----- 328 Query: 263 LKNLSISSLLEDTI 276 L+ S+ LE T+ Sbjct: 329 -LGLATSAALEHTV 341 >gi|256822003|ref|YP_003145966.1| putative periplasmic protease [Kangiella koreensis DSM 16069] gi|256795542|gb|ACV26198.1| Peptidase S49 domain protein [Kangiella koreensis DSM 16069] Length = 384 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 99/213 (46%), Gaps = 12/213 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 D+ + I G I S +E+ + ++ D +++ L SPGG ++ Sbjct: 130 SDSPQRMYVIDFEGDIHASGVESLREEVTAILATANKSDQ---VMIRLESPGGLVHSYGL 186 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 ++++++ + V E+AAS GY+++C ++ ++AA +++GSIGV+ + P Sbjct: 187 AASQLKRIRDAGLKLTISVDEVAASGGYMMACVADELIAAPFAILGSIGVVAEIPNFNRL 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + K + F + + + + ++ ++ F + E+R P Sbjct: 247 LQKANIDYEQHTAGQHKRTLTMFGQNTTASREKFKQELEETHQLFKAFIHENR--PALDL 304 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ G W G +A ++GL+D + ++V Sbjct: 305 NKVATGEHWYGRQALELGLVDKLQTSDDVILDA 337 >gi|218677398|ref|ZP_03525295.1| signal peptide peptidase SppA, 36K type [Rhizobium etli CIAT 894] Length = 194 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 83/164 (50%), Positives = 125/164 (76%) Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG+ Y GE IF+AI+ + +KPV+++V +AASAGY+I+ A + I+A ++S+ GSIGV Sbjct: 1 SPGGTTYGGEKIFKAIRAISAKKPVVSDVRTLAASAGYMIATAGDTIIAGDSSITGSIGV 60 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 +FQYP ++P LDK+GVS++ +KSSP+KAEPSPF E + +A M++++V SY+WFV LV+ Sbjct: 61 IFQYPQIQPLLDKIGVSLQEIKSSPLKAEPSPFHEASEEAKAMIRNMVVDSYNWFVDLVA 120 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + R +P D+ L L+DG I+TG +A KV L+D +GG+ E+ L Sbjct: 121 DRRKLPRDEVLKLADGTIYTGRQALKVKLVDTIGGEPEIRAYLK 164 >gi|149911384|ref|ZP_01900003.1| sohB protein, peptidase U7 family [Moritella sp. PE36] gi|149805559|gb|EDM65563.1| sohB protein, peptidase U7 family [Moritella sp. PE36] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 10/258 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAG 83 +S ED P + I I D++E+ E I+ ++V L S GG + Sbjct: 103 ASTDEDIEPRLFVIDFTAGI-DAKEVASLREEITAILFVATEHDEVLVRLESGGGVVHGY 161 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 ++++K + V ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 162 GLASSQLERLKQANIKLTIAVDKVAASGGYMMACIADHIIAAPFAIVGSIGVVAQIPNFN 221 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K + ++ + + K + F E + Q ++ ++ F VS R P Sbjct: 222 RLLKKNNIDVEQLTAGEFKRTLTMFGENDDAGRAKFQQELEETHVLFKDFVSTHR--PDM 279 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 ++ G W G A + GL+D + ++ ++ + + Sbjct: 280 DIEKIATGEHWFGTHAHERGLVDTLQTSDDYLLKANKSKTIYIVKYVVRKKLAEK--LAQ 337 Query: 263 LKNLSISSLLEDTIPLMK 280 +++IS+ L + K Sbjct: 338 AASMAISTSLNKFLQQSK 355 >gi|260898467|ref|ZP_05906963.1| putative protease SohB [Vibrio parahaemolyticus Peru-466] gi|308089023|gb|EFO38718.1| putative protease SohB [Vibrio parahaemolyticus Peru-466] Length = 294 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 10/202 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S PH+ + G I+ + E I I ++R+ +++ L S GG + Sbjct: 97 GSLDSKREPHLFVLDFNGSIDAKEVGSLREEITAILAVAREGD--EVLLRLESGGGMVHG 154 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P Sbjct: 155 YGLASSQLDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNF 214 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + + K + F E KA + ++ ++ F + E R P Sbjct: 215 NKLLKKHDIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PS 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGL 223 + ++ G W G +AK++GL Sbjct: 273 LELEKVATGEHWFGTQAKELGL 294 >gi|90021661|ref|YP_527488.1| putative periplasmic protease [Saccharophagus degradans 2-40] gi|89951261|gb|ABD81276.1| sohB peptidase. Serine peptidase. MEROPS family S49 [Saccharophagus degradans 2-40] Length = 365 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 10/213 (4%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + P V G I+ S+ E+I I I++ ++V L SPGG + Sbjct: 108 ADSNTEAKPRVFVTHFDGDIKASETQELREVITAILSIAKPSD--EVVVCLESPGGMVHG 165 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++ + P+ V ++AAS GY+++C +N IVAA +++GSIGV+ Q P Sbjct: 166 YGLAASQLARITEKNIPLTVCVDKVAASGGYMMACVANKIVAAPFAVIGSIGVVAQIPNF 225 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K V + + + K + F E K Q + ++ ++ F + + R Sbjct: 226 HRLLKKHDVDYEMLTAGEYKRTLTMFGENTEKGRQKFVEDLEETHDLFKDFIRQHR--SV 283 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G IW G +A + LID V + Sbjct: 284 VDVDKVATGEIWFGTKALEEKLIDAVQTSDAYL 316 >gi|119503274|ref|ZP_01625358.1| Cell surface receptor IPT/TIG [marine gamma proteobacterium HTCC2080] gi|119460920|gb|EAW42011.1| Cell surface receptor IPT/TIG [marine gamma proteobacterium HTCC2080] Length = 360 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 11/266 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRD-DSATALIVSLSSPGGSAYA 82 S S E + + + +G I S+ L E I I+ + +++ L SPGG ++ Sbjct: 101 SDSKDDEKSGSRLFVLRFQGDISASETESLREEISAIAPELRKGDEVLLCLESPGGMVHS 160 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +Q++++ + V ++AAS GY+++C + I++A +++GSIGVL Q P Sbjct: 161 YGLAASQLQRIRSTGATLTVAVDKVAASGGYMMACVGDRIISAPFAVIGSIGVLAQLPNF 220 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K V + + + K + F E + ++ +Y F V+ +R P Sbjct: 221 HRLLKKNDVDFELLTAGKYKRTLTMFGENTDDGRAKFVEDLEDTYDLFKDFVAINR--PV 278 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ G IW G A L+D + + Q+ A IR + K W Sbjct: 279 VDIDSVATGEIWYGQRAVDQNLVDELSTSDAYLQTRLAETEAFEIRFVA-----KKSWQE 333 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGL 287 + + + + L +Q + L Sbjct: 334 KFGMAAGAGIERTFLRLWQQGASRLL 359 >gi|90408618|ref|ZP_01216772.1| possible protease SohB [Psychromonas sp. CNPT3] gi|90310262|gb|EAS38393.1| possible protease SohB [Psychromonas sp. CNPT3] Length = 349 Score = 196 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 14/264 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGE 84 E + I +G I D++E+ E IS S + V L S GG + Sbjct: 93 GDFEAPEAQLYVIDFKGSI-DAKEVSSLREEISAILSVASAQDEVFVRLESGGGMVHGYG 151 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q++K+ + V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P Sbjct: 152 LAASQLQRLKDNNISLTISVDKVAASGGYMMACIADKIIAAPFAILGSIGVIAQIPNFNK 211 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + + K + F E + + + ++ F + VS+ R P Sbjct: 212 LLKKHDIEFEQLTAGQYKRTLTMFGENDDLGRDKFKQELQETHDLFKQFVSQHR--PNLD 269 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W G +A ++ LID + ++ + LG R + K+ + Sbjct: 270 MEKIATGEHWYGLQAIELDLIDKIQTSDDYL--MQQLGK----RHVVQIKYSKHKKLTEK 323 Query: 264 KNLSISSLLEDTIPLMKQTKVQGL 287 + S LE+++ + Q ++ Sbjct: 324 FGHAASLALENSLLKLMQVNLKNF 347 >gi|54113939|gb|AAV29603.1| NT02FT1074 [synthetic construct] Length = 339 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 110/250 (44%), Gaps = 14/250 (5%) Query: 32 EDNSPH--VARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +D+ P + I +G I+ SQ + I ++ + +IV + SPGG Sbjct: 88 QDDKPKQKIFVINFKGDIDASQVENLRNEVSAILAVANTED--EIIVRIDSPGGVVNGYG 145 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +++++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ Sbjct: 146 FAAAQLERIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRE 205 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+K G++++ S K + + + ++S + F + + R P Sbjct: 206 LLEKNGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLD 263 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W G +A ++GL+D + ++ L L ++ ++ + + Sbjct: 264 IDKVATGEYWFGKDALELGLVDKIQTYDDYLIDL--LKKQHNVYEVSYVIKKEKGFLRSK 321 Query: 264 KNLSISSLLE 273 ++ ++ Sbjct: 322 FSMLKRAITN 331 >gi|66045696|ref|YP_235537.1| putative periplasmic protease [Pseudomonas syringae pv. syringae B728a] gi|63256403|gb|AAY37499.1| Peptidase S49 [Pseudomonas syringae pv. syringae B728a] gi|330971283|gb|EGH71349.1| putative inner membrane peptidase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 340 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERARNA 298 >gi|33151994|ref|NP_873347.1| putative periplasmic protease [Haemophilus ducreyi 35000HP] gi|33148216|gb|AAP95736.1| putative secreted protease [Haemophilus ducreyi 35000HP] Length = 351 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 18/265 (6%) Query: 31 VEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + + G + S +E+ I D +++ L SPGG + Sbjct: 98 ADAEKARLFVLKFNGDLHASAVQSLRKEVSAIISVARPQDE---VLLQLESPGGVVHGYG 154 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q++++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + Sbjct: 155 LAASQLQRLRDHHIPLTVAVDKVAASGGYMMACVANKIVAAPFAILGSVGVVAQVPNIHR 214 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL K + + + + K + E K Q Q ++ ++ F + V+ +R P + Sbjct: 215 FLKKHEIDVDVMTAGEYKRTVTLAGENTEKGKQKFQQELEETHQLFKQFVANNR--PQLE 272 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W G +A + LID + +++ + D+ + K+ K Sbjct: 273 IEKVATGEHWFGQQALTLNLIDEIATSDDLILNAVK---DKEVIKLAFKQKKK---LAQR 326 Query: 264 KNLSISSLLEDTIPLMKQTKVQGLW 288 + LE+ I + + Sbjct: 327 LGSQMEQSLENLIAKLLHKNRSNML 351 >gi|197335839|ref|YP_002155843.1| putative protease SohB [Vibrio fischeri MJ11] gi|197317329|gb|ACH66776.1| putative protease SohB [Vibrio fischeri MJ11] Length = 353 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 8/206 (3%) Query: 37 HVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGEAIFRAIQK 92 + + G I D++E+ E +S + +++ L S GG + + + Sbjct: 106 RLFVLDFNGSI-DAKEVAALREEVSAILAVAIEGDEVLLRLESGGGMVHGYGLASSQLDR 164 Query: 93 VKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++ + V ++AAS GY+++C I+AA ++VGSIGV+ Q P L K + Sbjct: 165 LRDANIKLTISVDKVAASGGYMMACIGEKIIAAPFAIVGSIGVVAQLPNFNKLLKKNDIE 224 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + F E + KA + Q ++ ++ F + E R ++ G Sbjct: 225 FEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHVLFKDFICEHR--SELDLEKVATGE 282 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSL 237 W G +A ++GLID + ++ Sbjct: 283 HWFGKQALELGLIDDIQTSDDYLTKA 308 >gi|312961376|ref|ZP_07775881.1| peptidase S49 [Pseudomonas fluorescens WH6] gi|311285034|gb|EFQ63610.1| peptidase S49 [Pseudomonas fluorescens WH6] Length = 342 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 6/211 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRA 89 D P V + G I+ S + L I + + +++ L S GG ++ Sbjct: 90 DAKPRVFVLDFDGDIKASATESLRHEITALLSLATPKDEVVLRLESGGGMVHSYGLASSQ 149 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C I++A +++GSIGV+ Q P V L K Sbjct: 150 LARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLPNVNRLLKKH 209 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q+ +D ++ F VS R P ++ Sbjct: 210 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKNFVSRYR--PQLAIDEVA 267 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G +W G A L+D + +E + Sbjct: 268 TGEVWLGVAALDKQLVDELQTSDEYLATKAK 298 >gi|330890771|gb|EGH23432.1| putative inner membrane peptidase [Pseudomonas syringae pv. mori str. 301020] Length = 340 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KSRVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKDA 298 >gi|262368527|ref|ZP_06061856.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262316205|gb|EEY97243.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 320 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 110/266 (41%), Gaps = 15/266 (5%) Query: 28 SSHVEDNSPHVARIAIRG-----QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 S H + + V + +G +E +E I I ++ ++V L SPGG + Sbjct: 49 SRHRKKANQKVYILDFKGDTAATAVESLREEITLILATAKAGRDR-VVVRLESPGGMVHG 107 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++++ + V ++AAS GY+++C +N I+AA ++VGSIGV+ Q P Sbjct: 108 YGLAAAQLVRLRDAGFNLTICVDKVAASGGYMMACIANQIIAAPFAVVGSIGVVAQVPNF 167 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L + + + + K + F E + ++ + ++ F V + R P Sbjct: 168 NRLLKEHNIDFELYTAGQYKRTVTMFGENTAEGKAKFEEELQQTHVLFKHFVEKYR--PQ 225 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ G W G +A + L+D + + +L + + + K Sbjct: 226 LNVEKVATGEHWYGQDALDLNLVDQLQTSDAYLLNLL------TDHDVYVISTRKKPTLG 279 Query: 262 DLKNLSISSLLEDTIPLMKQTKVQGL 287 + L + + + +P + ++ L Sbjct: 280 EKLGLQAAQMADALVPAVMNKVIETL 305 >gi|304393460|ref|ZP_07375388.1| Na(+)/H(+) antiporter NhaA [Ahrensia sp. R2A130] gi|303294467|gb|EFL88839.1| Na(+)/H(+) antiporter NhaA [Ahrensia sp. R2A130] Length = 294 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 31/286 (10%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIER----------IERISRDDSATALIVSLSSPGG 78 S + ++ + + + G I + + ++R A + + ++SPGG Sbjct: 14 SKMGMDAAIIPVVRLEGAIMSGGSALRQNLNLAGCASRLKRAFEMKEAPCVAIIVNSPGG 73 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 S I++ I+ + K V V + AAS GY+I+CA + I A +S++GSIGV+ Sbjct: 74 SPVQSRLIYQRIRDLATEHDKKVHVFVEDAAASGGYMIACAGDQITADPSSIIGSIGVVS 133 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 ++KLGV + + K+ PF + ++ ++++ + F+ LV S Sbjct: 134 SGFGFVGAINKLGVERRVHTAGLNKSVLDPFLPEKAQDIKRLKELQLEIHGVFIDLVKAS 193 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 R+ + + G WT AK +GLID +G + Y + + K Sbjct: 194 RSDKLVEDKSMFTGMFWTAGPAKDMGLIDGIGDLRGTLRGFYGEKTKLKLVEA------K 247 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKV----QGLW------AVWN 292 ++ IS L IP+M GL A+W Sbjct: 248 KGLLGRSASMGISGL---GIPVMDANLGHQIADGLLSTAEERALWG 290 >gi|56707601|ref|YP_169497.1| putative periplasmic protease [Francisella tularensis subsp. tularensis SCHU S4] gi|110670072|ref|YP_666629.1| putative periplasmic protease [Francisella tularensis subsp. tularensis FSC198] gi|224456672|ref|ZP_03665145.1| putative periplasmic protease [Francisella tularensis subsp. tularensis MA00-2987] gi|254370119|ref|ZP_04986125.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874422|ref|ZP_05247132.1| peptidase S49 family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604093|emb|CAG45092.1| peptidase family S49 protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320405|emb|CAL08475.1| peptidase family S49 protein [Francisella tularensis subsp. tularensis FSC198] gi|151568363|gb|EDN34017.1| hypothetical protein FTBG_01222 [Francisella tularensis subsp. tularensis FSC033] gi|254840421|gb|EET18857.1| peptidase S49 family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158759|gb|ADA78150.1| putative periplasmic protease [Francisella tularensis subsp. tularensis NE061598] Length = 339 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 110/250 (44%), Gaps = 14/250 (5%) Query: 32 EDNSPH--VARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +D+ P + I +G I+ SQ + I ++ + +IV + SPGG Sbjct: 88 QDDKPKQKIFVINFKGDIDASQVENLRNEVSAILAVANTED--EIIVRIDSPGGVVNGYG 145 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +++++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ Sbjct: 146 FAAAQLERIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRE 205 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+K G++++ S K + + + ++S + F + + R P Sbjct: 206 LLEKNGINVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLD 263 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W G +A ++GL+D + ++ L L ++ ++ + + Sbjct: 264 IDKVATGEYWFGKDALELGLVDKIQTYDDYLIDL--LKKQHNVYEVSYVIKKEKGFLRSK 321 Query: 264 KNLSISSLLE 273 ++ ++ Sbjct: 322 FSMLKRAITN 331 >gi|289627176|ref|ZP_06460130.1| putative periplasmic protease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648724|ref|ZP_06480067.1| putative periplasmic protease [Pseudomonas syringae pv. aesculi str. 2250] gi|330867981|gb|EGH02690.1| putative inner membrane peptidase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 340 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KSRVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKDA 298 >gi|302187752|ref|ZP_07264425.1| putative periplasmic protease [Pseudomonas syringae pv. syringae 642] gi|330953371|gb|EGH53631.1| putative inner membrane peptidase [Pseudomonas syringae Cit 7] Length = 340 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKDA 298 >gi|75676773|ref|YP_319194.1| peptidase S49 [Nitrobacter winogradskyi Nb-255] gi|74421643|gb|ABA05842.1| peptidase S49 [Nitrobacter winogradskyi Nb-255] Length = 292 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 12/221 (5%) Query: 38 VARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 V + + G I L +ER A A+ + ++SPGGS I+ Sbjct: 23 VPVVRLSGVIGAVTPLRPGMTLAGVARTLERAFAVADAKAVALVVNSPGGSPVQSRQIYL 82 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I+++ K PV+ V ++AAS GY+I+CA + I +S++GSIGV+ + Sbjct: 83 RIRQLSREKEIPVLVFVEDVAASGGYMIACAGDEIFCDPSSILGSIGVVGGGFGFTELIR 142 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+GV + + KA PF NP V ++ + + F+ LV SR Sbjct: 143 KIGVERRLYTAGEHKATLDPFLPENPDDVARLKAIQREIHATFIELVKASRGGRLKGADD 202 Query: 207 -LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 L G W G + +GL D +G ++ + V + Sbjct: 203 LLFTGEYWAGERSVALGLADGIGDLRSTLRARFGDKVSTPL 243 >gi|110667987|ref|YP_657798.1| signal peptide peptidase [Haloquadratum walsbyi DSM 16790] gi|109625734|emb|CAJ52167.1| probable signal peptide peptidase [Haloquadratum walsbyi DSM 16790] Length = 319 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 20/252 (7%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQI---------------EDSQELIERIERISRDDS 65 V + + +VA++ I G I + +++ERIE DD+ Sbjct: 37 IVAQLTRGRLGDAEEYNVAKVIISGPIQRDRGRPSPLSASGASAADDIVERIEDADDDDA 96 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 AL+V L++PGG + I RA ++ P I + AS GY I+ + + A + Sbjct: 97 IEALLVELNTPGGEVLPSDDIRRA--AIEFDGPTIAYATDTCASGGYWIASGCDEMWARD 154 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 SL+GSIGV+ P DKLG+S + + K P E+ + +Q +VD Sbjct: 155 VSLIGSIGVVGSRPNASGLADKLGISYEQFTAGEYKDAGVPLREIEDGEREYLQSIVDGY 214 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 Y FV VSE R++ ++ ++ RI+ G +A ++GLID +G +++V + L + Sbjct: 215 YDQFVETVSEGRDMDPEQIRD-TEARIYLGNDALEIGLIDELGTEDDVKDRIENL--IDA 271 Query: 246 IRKIKDWNPPKN 257 +I+++ P ++ Sbjct: 272 EPEIQEFKPNRS 283 >gi|71733789|ref|YP_274809.1| periplasmic protease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487854|ref|ZP_05641895.1| putative periplasmic protease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71554342|gb|AAZ33553.1| peptidase, U7 family [Pseudomonas syringae pv. phaseolicola 1448A] gi|320328970|gb|EFW84969.1| putative periplasmic protease [Pseudomonas syringae pv. glycinea str. race 4] gi|330985296|gb|EGH83399.1| putative inner membrane peptidase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008563|gb|EGH88619.1| putative inner membrane peptidase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 340 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KSRVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F VS R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVSSYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKDA 298 >gi|134302463|ref|YP_001122433.1| putative periplasmic protease [Francisella tularensis subsp. tularensis WY96-3418] gi|134050240|gb|ABO47311.1| peptidase, S49 (protease IV) family protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 338 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 12/243 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + I +G I+ SQ + I ++ + +IV + SPGG ++ Sbjct: 94 KIFVINFKGDIDASQVENLRNEVSAILAVANTED--EIIVRIDSPGGVVNGYGFAAAQLE 151 Query: 92 KVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ S K + + + ++S + F + + R P ++ G Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLDIDKVATG 269 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W G +A ++GL+D + ++ L L ++ ++ + + ++ + Sbjct: 270 EYWFGKDALELGLVDKIQTYDDYLIDL--LKKQHNVYEVSYVIKKEKGFLRSKFSMLKRA 327 Query: 271 LLE 273 + Sbjct: 328 ITN 330 >gi|145300014|ref|YP_001142855.1| periplasmic protease [Aeromonas salmonicida subsp. salmonicida A449] gi|142852786|gb|ABO91107.1| probable protease sohB [Aeromonas salmonicida subsp. salmonicida A449] Length = 335 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 112/258 (43%), Gaps = 14/258 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGE 84 + ED + + G D++E+ E +S S +++ L S GG + Sbjct: 82 AKTEDERSRLFVLDFNGS-MDAKEVASLREEVSAVIGVAQSGDEVLLRLESGGGVVHGYG 140 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q+++++ + + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 141 LAASQLQRLRDKGIKLTVAIDKVAASGGYMMACVADQILAAPFAIVGSIGVIAQLPNFNK 200 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + K + F E + + ++ + + + F V+E R P+ Sbjct: 201 LLKKHDIEFEMHTAGQYKRTITMFGENDDLGREKFREELGAIHERFKAFVAEHR--PHLD 258 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W ++AK +GL+D + ++ + + K+ + K Sbjct: 259 IDSVTTGEHWLASQAKGLGLVDTLCTSDDYLLA------QANHHKVVGISYRKPKSLTQK 312 Query: 264 KNLSISSLLEDTIPLMKQ 281 + LE ++ + Q Sbjct: 313 LGQQAALALESSLGRLWQ 330 >gi|237808143|ref|YP_002892583.1| putative periplasmic protease [Tolumonas auensis DSM 9187] gi|237500404|gb|ACQ92997.1| Peptidase S49 domain protein [Tolumonas auensis DSM 9187] Length = 339 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 12/216 (5%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 E + I +G ++ + E+ + DD +++ + S GG + Sbjct: 87 AESTKSRLFLIDFKGGMDAREVSSLREEITAVLTMAKSDDE---VLIRVESGGGVVHGYG 143 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q+++++ + + ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 144 LGASQLQRIRDQGLYLTVSIDKVAASGGYMMACVAQKIIAAPFAIVGSIGVVAQLPNFNR 203 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K V ++ + K + F E + KA + + +++ + F + VSE R P Sbjct: 204 LLKKHDVDVELHTAGQFKRTLTIFGENDDKAREKFKAELETVHQQFKQFVSEHR--PRMD 261 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W AEAKK+GL+D + ++ S + Sbjct: 262 MEQIATGEHWLAAEAKKLGLVDELRTSDDYLLSQFE 297 >gi|254372516|ref|ZP_04988005.1| hypothetical protein FTCG_00078 [Francisella tularensis subsp. novicida GA99-3549] gi|254373978|ref|ZP_04989460.1| peptidase family S49 protein [Francisella novicida GA99-3548] gi|151570243|gb|EDN35897.1| hypothetical protein FTCG_00078 [Francisella novicida GA99-3549] gi|151571698|gb|EDN37352.1| peptidase family S49 protein [Francisella novicida GA99-3548] gi|328676618|gb|AEB27488.1| peptidase family S49 protein [Francisella cf. novicida Fx1] Length = 338 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 12/243 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + I +G I+ SQ + I ++ + +IV + SPGG ++ Sbjct: 94 KIFVINFKGDIDASQVENLRNEVSAILAVANTED--EIIVRIDSPGGVVNGYGFAAAQLE 151 Query: 92 KVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ S K + + + ++S + F + + R P ++ G Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLDIDKVATG 269 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W G +A ++GL+D + ++ L L ++ ++ + + ++ + Sbjct: 270 EYWFGKDALELGLVDKIQTYDDYLIDL--LNKQHNVYEVSYVIKKEKGFLRSKFSMLKRA 327 Query: 271 LLE 273 + Sbjct: 328 ITN 330 >gi|118497149|ref|YP_898199.1| putative periplasmic protease [Francisella tularensis subsp. novicida U112] gi|194323447|ref|ZP_03057224.1| peptidase, S49 (protease IV) family [Francisella tularensis subsp. novicida FTE] gi|208778942|ref|ZP_03246288.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] gi|118423055|gb|ABK89445.1| peptidase family S49 protein [Francisella novicida U112] gi|194322302|gb|EDX19783.1| peptidase, S49 (protease IV) family [Francisella tularensis subsp. novicida FTE] gi|208744742|gb|EDZ91040.1| peptidase, S49 (protease IV) family [Francisella novicida FTG] Length = 338 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 12/243 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + I +G I+ SQ + I ++ + +IV + SPGG ++ Sbjct: 94 KIFVINFKGDIDASQVENLRNEVSAILAVANTED--EIIVRIDSPGGVVNGYGFAAAQLE 151 Query: 92 KVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ S K + + + ++S + F + + R P ++ G Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLDIDKVATG 269 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W G +A ++GL+D + ++ L L ++ ++ + + ++ + Sbjct: 270 EYWFGKDALELGLVDKIQTYDDYLIDL--LNKQHNVYEVSYVIKKEKGFLRSKFSMLKRA 327 Query: 271 LLE 273 + Sbjct: 328 ITN 330 >gi|330808706|ref|YP_004353168.1| peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376814|gb|AEA68164.1| putative peptidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 343 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 12/212 (5%) Query: 35 SPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 P V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 93 KPRVFVLDFDGDIKASATESLRHEITALLTLATPKDE---VVLRLESGGGMVHSYGLASS 149 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ P+ + ++AAS GY+++C I++A +++GSIGV+ Q P V L K Sbjct: 150 QLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLPNVNRLLKK 209 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + F E K + Q+ +D ++ F VS R P + Sbjct: 210 HDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHELFKNFVSNYR--PQLAIDEV 267 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + G +W G A+ GL+D + +E Sbjct: 268 ATGEVWLGVAAQGKGLVDELKTSDEYLAERAK 299 >gi|330875134|gb|EGH09283.1| putative inner membrane peptidase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 340 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKQA 298 >gi|330982181|gb|EGH80284.1| putative inner membrane peptidase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 340 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KARVYVLDFDGDIKASATESMRHEITALLTLATDRD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKDA 298 >gi|153871746|ref|ZP_02000840.1| Peptidase S49, SppA [Beggiatoa sp. PS] gi|152071791|gb|EDN69163.1| Peptidase S49, SppA [Beggiatoa sp. PS] Length = 211 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%) Query: 82 AGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 I I++++ + P V ++ AS GY I+ A++ I A + S+VGSIGVL Sbjct: 2 QAGYINDEIRRLRKKHPEIPVYAVATDICASGGYYIAAAADEIYADKASVVGSIGVLMDG 61 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR- 197 ++KLGV + + + K PFS + V+ ++ V++ + F++ V E R Sbjct: 62 FGFVETMNKLGVERRLLTAGEHKGFLDPFSPMKEDDVEHIKTVLNDIHVQFIKQVKEGRE 121 Query: 198 -------NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + +L G +WTG +A ++GL+D +G V + + KIK Sbjct: 122 KSLTNKGKLELLDNPILFSGLVWTGEQALELGLVDGLGSSSYVAREII------KAEKIK 175 Query: 251 DWNPPKNYW--FCDLKNLSISSLLEDTIPLMKQT 282 D+ P NY F + ++++ L L T Sbjct: 176 DFTPKPNYLDRFAERLGATMANTLTQLFKLESNT 209 >gi|258543792|ref|ZP_05704026.1| S49 (protease IV) family peptidase [Cardiobacterium hominis ATCC 15826] gi|258520967|gb|EEV89826.1| S49 (protease IV) family peptidase [Cardiobacterium hominis ATCC 15826] Length = 332 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 12/212 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P + + G IE S +++ I+ +D +++ L S GG +A Sbjct: 86 AQHKPRIFVLDFDGDIEASAVAQLREQISAVIQVAGTEDR---VLLRLESGGGLVHAYGL 142 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ R+ P++ V ++AAS GY+++C +N ++AA +++GS+GV+ P Sbjct: 143 AASQLARLRERQIPLVIAVDKVAASGGYMMACLANELIAAPFAILGSVGVIGALPNFNEL 202 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + + + + K + F E Q + + ++ F + R P Sbjct: 203 LKQHRIRYEEHTAGEHKRSLTLFGENTDADRQQFRHELAVTHDLFKNHIHRYR--PQLDI 260 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G W GA+A + LID +G ++ + Sbjct: 261 DAIATGETWYGAQAVENHLIDAIGTSDDYILA 292 >gi|330967647|gb|EGH67907.1| putative inner membrane peptidase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 340 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 10/218 (4%) Query: 30 HVEDNSPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 85 KLAEPKARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYG 142 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V Sbjct: 143 LASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNR 202 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + + K + F E K + Q +D ++ F V+ R P Sbjct: 203 LLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLS 260 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 261 IDEVATGEVWLGMAAVDKLLVDELKTSDEYLAERAKQA 298 >gi|229590082|ref|YP_002872201.1| putative periplasmic protease [Pseudomonas fluorescens SBW25] gi|229361948|emb|CAY48848.1| putative peptidase [Pseudomonas fluorescens SBW25] Length = 341 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 6/211 (2%) Query: 33 DNSPHVARIAIRGQIEDS--QELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRA 89 D P V + G I+ S + L I + + +++ L S GG ++ Sbjct: 89 DAKPRVFVLDFDGDIKASATESLRHEITALLSLATPKDEVVLRLESGGGMVHSYGLASSQ 148 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C I++A +++GSIGV+ Q P V L K Sbjct: 149 LARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLPNVNRLLKKH 208 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q+ +D ++ F VS R P ++ Sbjct: 209 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKNFVSRYR--PQLAIDDVA 266 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G +W G A L+D + +E + Sbjct: 267 TGEVWLGVAALDKQLVDELQTSDEYLATKAK 297 >gi|28869915|ref|NP_792534.1| peptidase, U7 family [Pseudomonas syringae pv. tomato str. DC3000] gi|28853160|gb|AAO56229.1| peptidase, U7 family [Pseudomonas syringae pv. tomato str. DC3000] gi|331014356|gb|EGH94412.1| putative inner membrane peptidase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 340 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERARQA 298 >gi|224372341|ref|YP_002606713.1| PfaP [Nautilia profundicola AmH] gi|223589924|gb|ACM93660.1| PfaP [Nautilia profundicola AmH] Length = 300 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 13/275 (4%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYF---------SWSSHVEDNSPHVARIAIRGQI--EDSQ 51 F +K IK + V+ ++ L + + S + P+VA I I I + Sbjct: 15 FKIKAIKEKVVLFGVILLILAELVALGVFLKKTLSPSIPITKPYVAVININKTITVDYIN 74 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +L++++ + +D + ++ ++PGGS A + ++ + K V V MAAS G Sbjct: 75 KLMDKMNALKKDKNCKEYLLVFNTPGGSPSASDEFNAYLKFLNKSKKVNVYVESMAASGG 134 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I A IVA + ++VGSIGV+ + + K+GV + K S F + + Sbjct: 135 YYIISAIKPIVANKNAVVGSIGVIMPHYVIGKLAKKIGVEEDDITVGKYKKPISLFKKAS 194 Query: 172 PKAVQ-MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 P+ + +M++++ +Y F+++V+E RNI DK ++G+I+ + K V L+D + Sbjct: 195 PEQKEYIMKNLLLPTYDNFLKIVAEDRNISIDKLKNYAEGKIFIATKVKGV-LVDKISTL 253 Query: 231 EEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 E + D I Y L + Sbjct: 254 AEFKNEIKKRLGDVEFININLDKKKFPYLNIKLDS 288 >gi|119476008|ref|ZP_01616360.1| sohB protein, peptidase U7 family [marine gamma proteobacterium HTCC2143] gi|119450635|gb|EAW31869.1| sohB protein, peptidase U7 family [marine gamma proteobacterium HTCC2143] Length = 345 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 12/215 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 +ED + + G ++ S +E+ + + DD +++ L SPGG + Sbjct: 89 GELEDPKKRIYVLTFDGDVKASAVSSLREEITAILTVATADDE---VVLCLESPGGMVHT 145 Query: 83 GEAIFRAIQKV-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++ K P+ V +AAS GY+++C N I+AA +++GSIGV+ + P Sbjct: 146 YGLAASQLARITKQNIPLTVVVDAVAASGGYMMACIGNKILAAPFAVIGSIGVVAELPNF 205 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 L K + + + K + F E K + ++ ++ F VSE R P Sbjct: 206 HRLLKKNDIDFELFTAGEHKRTVTMFGENTDKGKAKFVEELEDTHELFKSFVSEHR--PQ 263 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G +W G A + LID + +E S Sbjct: 264 VNVAEVATGEVWYGQRAIENNLIDDIQTSDEYLMS 298 >gi|330960941|gb|EGH61201.1| putative inner membrane peptidase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 336 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 91/214 (42%), Gaps = 10/214 (4%) Query: 34 NSPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 89 SKSRVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASS 146 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 147 QLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKK 206 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + + K + F E K + Q +D ++ F V+ R P + Sbjct: 207 HDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHELFKNFVASYR--PQLSIDEV 264 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + G +W G A L+D + +E Sbjct: 265 ATGEVWLGMAAIDKLLVDELKTSDEYLAERAKEA 298 >gi|222112373|ref|YP_002554637.1| peptidase s49 [Acidovorax ebreus TPSY] gi|221731817|gb|ACM34637.1| peptidase S49 [Acidovorax ebreus TPSY] Length = 441 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 15/250 (6%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI------------- 47 ++ +L R + ++ + Y + + + VA I I G + Sbjct: 23 LDVILSVFGARIGLTDML-VPADYAPTTRPLSPATGKVAVIPIHGTLVRRTSGLEAVSGL 81 Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +++ A+++ + SPGG + + I+ KPV ++MA Sbjct: 82 ASYTSIAVQLDAALASPEVAAILLDVDSPGGESGGVFDLADRIRSASRIKPVWAVANDMA 141 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SA Y + A++ + A T VGSIGV+ + K GV +V + K + +P Sbjct: 142 FSAAYALVSAASRVFVARTGGVGSIGVIAMHIDQSVKDAKDGVRYTAVFAGERKNDLNPH 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ +A +++ VD Y FV V+ R + D ++ ++ G +A GL D V Sbjct: 202 EPISGEAHAVLKAEVDRVYDLFVETVARHRGLDADAVRA-TEAGLFFGPDAVGAGLADAV 260 Query: 228 GGQEEVWQSL 237 GG ++ L Sbjct: 261 GGFDDALSQL 270 >gi|70731028|ref|YP_260769.1| putative periplasmic protease [Pseudomonas fluorescens Pf-5] gi|68345327|gb|AAY92933.1| peptidase, U7 family [Pseudomonas fluorescens Pf-5] Length = 344 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 12/215 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + P V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 91 AEAKPRVFVLDFNGDIKASATEGLRHEITALLSLATPKDE---VVLRLESGGGMVHSYGL 147 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ + ++AAS GY+++C I++A +++GSIGV+ Q P V Sbjct: 148 ASSQLARIRQAGVPLTVCIDKVAASGGYMMACIGEKIISAPFAILGSIGVVAQLPNVNRL 207 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E K + Q+ +D ++ F VS R P Sbjct: 208 LKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDVTHQLFKNFVSRYR--PQLAI 265 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G +W G A++ L+D + +E Sbjct: 266 DEVATGEVWLGVAAQEKLLVDELQTSDEYLADKAK 300 >gi|300022742|ref|YP_003755353.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] gi|299524563|gb|ADJ23032.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] Length = 429 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 3/252 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 A I + + + E++++ S D +++ +++PGG A + I +++ +KP Sbjct: 81 AYIGASSGLTSYEGISEQLKKASTDSEVRGILLDMNTPGGEAAGTFEVSNLIMEIRKKKP 140 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ V +MA SAGY I+ A++ I +T ++GSIGV++ + + G+ + + Sbjct: 141 VVAMVADMACSAGYAIASAASQIYTTQTGMMGSIGVVWVHFDRSLQMQNEGIKPTILHAG 200 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 KAE +PF ++ Q ++ + F+ V + R + L ++ ++ G +A Sbjct: 201 ARKAEGNPFEPLSRVTKANFQAEIEKLHSLFIETVLDGRPSLKEADLRATEAAVFMGQDA 260 Query: 219 KKVGLIDVVGGQEEVWQSL-YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 K+GL D V + V + + + + + NP + + +S + Sbjct: 261 VKIGLADGVSTFDRVLEVMSQQITKLPAAPAGYESNPKEKKAMTNQPAAEAASGTDQA-- 318 Query: 278 LMKQTKVQGLWA 289 + + G+ A Sbjct: 319 ALDAARADGVKA 330 >gi|88608447|ref|YP_506296.1| signal peptide peptidase SppA, 36K type [Neorickettsia sennetsu str. Miyayama] gi|88600616|gb|ABD46084.1| signal peptide peptidase SppA, 36K type [Neorickettsia sennetsu str. Miyayama] Length = 308 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 9/288 (3%) Query: 9 KTRYVMLSLVTLTVVY----FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 + V +L+ L ++ F ++P++ R+ G I+ + + + Sbjct: 20 FWKVVTFALIALLLIVSGSSFRGGFFDSFSTPYIGRVVFSGVIDQDLARNSQFASFADNP 79 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A+I+ + S GG A A EA++ ++ V KPV+ + + AS Y+++ A+ IVA Sbjct: 80 KIKAIILHVDSGGGGAAASEALYNVVRSVSQVKPVVIVANGIMASGAYMVAMAAEHIVAY 139 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 TS+VGSIG++ Q P K+GV + V+S +KA PS E +A M+ + Sbjct: 140 NTSIVGSIGMILQAPNFYEIGKKVGVKMDVVRSGRLKAFPSILEEFTKEARLAMEHSISV 199 Query: 185 SYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + F+ +V E R I + + ++ G+I+TG EA + L+D +G + + L G+ Sbjct: 200 ANEHFLSMVQERRKITDARVMSEIATGKIFTGREALEFSLVDEIGDEGNAVRWLKERGIT 259 Query: 244 QSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 IR + + K + + S S+L + + GL AV+ Sbjct: 260 GKIRDL-GFVSGKGFRVGKIPPSSYLSILNEFFHYLCS---PGLLAVF 303 >gi|304413780|ref|ZP_07395224.1| S49 family peptidase [Candidatus Regiella insecticola LSR1] gi|304283871|gb|EFL92265.1| S49 family peptidase [Candidatus Regiella insecticola LSR1] Length = 348 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 100/217 (46%), Gaps = 10/217 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + P + + +G I+ + E I I ++ +++ L SPGG + Sbjct: 93 NTTATAKPCLYVLDFKGSIDAHEVSSLREEISAILAVATKQD--EVLLRLESPGGVVHGY 150 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ + V ++AAS GY+++C ++ +V+A +++GSIGV+ Q P Sbjct: 151 GLAASQLVRLQQAGIHLTVAVDKIAASGGYMMACVADRVVSAPFAIIGSIGVVAQIPNFN 210 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +L K + I+ + K + F E + + ++ ++ ++ F + + + +P Sbjct: 211 RWLRKNNIDIELHTAGEFKRTLTLFGENTEQGREKFREELNETHLLFKQFIKQR--LPQL 268 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G AK+ GL+D + +E+ + A Sbjct: 269 DIDTVATGEHWFGITAKEKGLVDAIESSDELLIAKMA 305 >gi|300024371|ref|YP_003756982.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] gi|299526192|gb|ADJ24661.1| peptidase S49 [Hyphomicrobium denitrificans ATCC 51888] Length = 277 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 22/277 (7%) Query: 33 DNSPHVARIAIRGQIEDSQELI---------ERIERISRDDSATALIVSLSSPGGSAYAG 83 P V + G I + L IE+ A+ V ++SPGGS Sbjct: 5 SRRPFVPVLRFHGPIGMATPLRPGLTLGAYSNAIEKAFLVSKLPAVAVIVNSPGGSPVQS 64 Query: 84 EAIFRAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 +F+ I+++ +K V ++AAS GY ++ A + I A +S++GSIGV+ + Sbjct: 65 NLLFKRIRQLAVEKKKRVYVFCEDVAASGGYFLAIAGDEIYADPSSIIGSIGVVSRSFGF 124 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIP 200 L+K+GV + + K + PF + V ++ + + F+ LV E R Sbjct: 125 VDLLEKIGVERRVYTAGINKNQLDPFLPEDADDVARLKAIQRDVHDIFIGLVKERRLGKL 184 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 L G W+ A A + GL+D + Q ++ + ++K P K Sbjct: 185 KAPDTELFSGAFWSAARAVEFGLVDGITDIRSKMQDIFGEKI-----RLKVIEPEKPGLL 239 Query: 261 CDLKNLSISS-----LLEDTIPLMKQTKVQGLWAVWN 292 L+ + L L+ + + LW+ + Sbjct: 240 ARLRRTPGAIGIQTPALAFADDLVSAVETRTLWSRFG 276 >gi|52549905|gb|AAU83754.1| protease IV [uncultured archaeon GZfos33H6] Length = 251 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 13/233 (5%) Query: 35 SPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I+G I + LI+ I A+I ++SPGG+ +A + Sbjct: 9 KGSIAIIPIKGMITSEESGFGLMAASTVLIKDIAEAEIKRKIKAVIFEINSPGGTPFASK 68 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I I+ + KP I V E AAS Y I+ A + IVA E S VGSIG + P + Sbjct: 69 EIATCIENI--DKPAIAWVREYAASGAYWIASACDEIVADELSTVGSIGAMSIRPDIGEL 126 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + K G+ I+++++ K P+ ++ + ++++ +D F+ V+++R + K Sbjct: 127 MKKFGIDIETLRTGRYKGMGLPYEKLTEEERELLKKELDEIQDNFLNAVAKNRKLDESKM 186 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 LS +++ G EAK++GLID +GG+E + + KI D+ K Sbjct: 187 KELSTAKVYLGREAKEMGLIDHLGGKELAIRIAKERSGIRK-EKIVDYGERKR 238 >gi|126642480|ref|YP_001085464.1| putative periplasmic protease [Acinetobacter baumannii ATCC 17978] Length = 226 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 9/218 (4%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 V L SPGG + + ++++ + V ++AAS GY+++C +N I++A ++V Sbjct: 2 VRLESPGGMVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIISAPFAVV 61 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GSIGV+ Q P L + V + + K + F E P+ ++ + ++ F Sbjct: 62 GSIGVVAQVPNFNRLLKEHNVDFELYTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLF 121 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V + R P ++ G W G +A + L+D + +E +L + Sbjct: 122 KHFVEKYR--PQLNVDKVATGEHWYGQDALDLNLVDKLQTSDEYLLALL------PQHDV 173 Query: 250 KDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 N K + L + + + IP + L Sbjct: 174 YVINTRKKATLGEKLGLQAAQMADSLIPAVMNKVADTL 211 >gi|58616276|ref|YP_195405.1| periplasmic serine protease (ClpP class) [Azoarcus sp. EbN1] gi|56315737|emb|CAI10381.1| predicted periplasmic serine proteases (ClpP class) [Aromatoleum aromaticum EbN1] Length = 329 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 24/275 (8%) Query: 7 KIKTRYVMLSLVTLTVVYFSWS------------SHVEDNSPHVARIAIRGQIED---SQ 51 K+ R+++ S V ++ ++ P +A + I G I + + Sbjct: 39 KLFRRFMIASFFIGGAVLYAMFYTSTLGIKVNIFERFKEREPELAVVRISGTIGELVTAD 98 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAAS 109 LI I + A+++ ++SPGG+ E I ++ ++ + P+ + + AS Sbjct: 99 TLIPAIRSAFEAKTTKAVVLQINSPGGAPGDAERIGSFVREMRLSSEIPIHAVIEGIGAS 158 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A YLI+ ++ I A SLVGSIG + LD++GV ++ S +K+ +PF+ Sbjct: 159 AAYLIAMETDSIYAGRYSLVGSIGAVLSAWEAHQLLDRIGVQQRTFSSGELKSMLNPFAP 218 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 N + Q +VD F + +R + G +W G A+++GL+D +G Sbjct: 219 PNEEGNAKAQSLVDEMGEMFREDLMLARAKKLTSGIDYGTGEVWNGVVAQEIGLVDEIGT 278 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 E QS Y L K++ + P + Y F + Sbjct: 279 IES-IQSKYGL------EKLRVYRPFRPYSFMRMM 306 >gi|294851553|ref|ZP_06792226.1| protease IV [Brucella sp. NVSL 07-0026] gi|294820142|gb|EFG37141.1| protease IV [Brucella sp. NVSL 07-0026] Length = 225 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 133/214 (62%), Gaps = 12/214 (5%) Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++K+ +KPV+T+V +AASAGY+I+ AS+ IVA +TS+VGSIGVLFQYP + LD LG Sbjct: 1 MRKIATKKPVVTQVGTLAASAGYMIASASDHIVARQTSIVGSIGVLFQYPDLSKLLDTLG 60 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V ++++KSSP+KAEP+ FS + +A M++ ++ SY WFV +V E R +++ L L++ Sbjct: 61 VKVETIKSSPLKAEPNYFSPASEEAKNMIRSMIMDSYDWFVGIVQERRAFTHEQALALAN 120 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 G ++TG +A LID +GG+ E L G+ + ++ +W P + L++L I Sbjct: 121 GAVFTGRQALDKKLIDGLGGEAEAVAWLQTKGLSDKLPRL-EWKPVGSETGFSLRDLIIH 179 Query: 270 S------LLEDTIPLMK-----QTKVQGLWAVWN 292 + L ++ +K + + GL +VW+ Sbjct: 180 AGARLLGLPQEADGAIKEIARDRIFLDGLLSVWH 213 >gi|117926174|ref|YP_866791.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609930|gb|ABK45385.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 392 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 15/228 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQ-------IEDSQELI------ERIERISRDDSATALIVS 72 SS + +A + I G IE + L+ E++ + D + A+++ Sbjct: 33 DHSSDLMVTPNGIAVVPIHGTLVKRAGAIEAASGLMSYASIEEKLLDAATDPAVRAILMD 92 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I + KP+ + A SA YLI+ ++ I+ +T+ VGSI Sbjct: 93 IDSPGGEVGGVFDLAAMISEAGQGKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSI 151 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + K G S +V + K + S + ++ A +Q VD Y F + Sbjct: 152 GVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSDAARSNLQQEVDRLYGMFTGM 211 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ R +P ++ ++ G A K GL D VG + L AL Sbjct: 212 VASGRGMPEAVVRA-TEAGLFFGDNAVKAGLADQVGTIRDALAGLTAL 258 >gi|126667357|ref|ZP_01738329.1| predicted inner membrane peptidase [Marinobacter sp. ELB17] gi|126628113|gb|EAZ98738.1| predicted inner membrane peptidase [Marinobacter sp. ELB17] Length = 362 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 11/232 (4%) Query: 37 HVARIAIRGQIEDSQELIERIERI------SRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 V + G I+ S E + R ++V L S GG ++ + Sbjct: 113 RVFVLDFDGDIKASDT--EGLRRAITAVLSVAKPEHDEVVVRLESGGGMVHSYGLAAAQL 170 Query: 91 QKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ + + V ++AAS GY+++C ++ IVA+ +++GSIGV+ Q P V L K Sbjct: 171 DRIRAKGLNLTVCVDKVAASGGYMMACVADRIVASPFAILGSIGVVAQLPNVHRLLKKNN 230 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V + + + K + F E K Q ++ + F V E R P +++ Sbjct: 231 VDFEVLTAGEHKRTLTVFGENTDKGRQKFLADLEDIHQLFKDYVGERR--PQLDMAAVAN 288 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 G IW G A V LIDV+ +E + + P+ Sbjct: 289 GDIWFGRRALDVKLIDVIQTSDEYLLEAAERAELVLVSYQRKRTLPEKLGLA 340 >gi|320334156|ref|YP_004170867.1| peptidase S49 [Deinococcus maricopensis DSM 21211] gi|319755445|gb|ADV67202.1| peptidase S49 [Deinococcus maricopensis DSM 21211] Length = 545 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 21/229 (9%) Query: 32 EDNSPHVARIAIRGQI-------------------EDSQELIERIERISRDDSATALIVS 72 VA +++ G I S ++ + R D + A+++ Sbjct: 265 AKGDGRVAVVSVEGSIVTGRSRNNPLPIPLVGGAMAGSDTVVAALRRAKADKATRAIVLY 324 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGGSA A + I+R +Q + KPV+ + +AAS GY + + I+A+ ++ GSI Sbjct: 325 VDSPGGSALASDLIWREVQ--TSEKPVVAVMGAVAASGGYYVVAGAQRILASPYTITGSI 382 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ P ++ F + G++ + V S + + +++ ++ Y F Sbjct: 383 GVVTGKPVLEAFNARHGLNPERVARQEHALMYSSSRPFSEGELALVERSIEEVYARFTAR 442 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 V+ R + + L GRIW+G +A GLID +G + L Sbjct: 443 VAAGRKLSVARVDELGRGRIWSGQDALTHGLIDELGDLRAGVERACELA 491 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 3/142 (2%) Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 K + V + A+ L + + I + E++ V G + Y+ FL K GV+ ++ Sbjct: 101 EHKRTVAFVPHLNAT-TLLAASGAREITSPESAEVMLQGFAMETTYLGAFLKKHGVAFEN 159 Query: 155 VKSSPMKAEPSPFSEVNPKA--VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 V+ KA + FS+ A + + ++ + +V ++ +R +P D + Sbjct: 160 VRIREFKAALTRFSDEGMDAHNREQLSALLAGTEAAWVEELARARRVPEDTVRGWLTDPV 219 Query: 213 WTGAEAKKVGLIDVVGGQEEVW 234 + A+ GLID V ++E+ Sbjct: 220 TSADGARARGLIDRVAYEDELV 241 >gi|237739508|ref|ZP_04569989.1| protease IV [Fusobacterium sp. 2_1_31] gi|229423116|gb|EEO38163.1| protease IV [Fusobacterium sp. 2_1_31] Length = 588 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 14/238 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + + ++D+ V I + G I +SQ E I ++ + A+++ Sbjct: 302 YYQEATLDDSDNIVYVIPLEGDIVESQTEIFSGEANINVNETIAKLNTAKENKKIKAVVL 361 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I ++++ + KPV + +AAS GY IS +N I ++ GS Sbjct: 362 RVNSPGGSALTSDIIAEKVKELASEKPVYVSMSSVAASGGYYISANANKIYVDRNTVTGS 421 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 +GV+ L GV+++ + S + K + + Y F+ Sbjct: 422 VGVVSVLVDYSSLLKDNGVNVEKISEGEYSDLYSVDT-FTEKKYNKIYNSNLKVYEDFLN 480 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 +VS+ R I +K L++GR+WTG EA K GL D +GG ++ + Sbjct: 481 VVSKGRKIDKEKLKELAEGRVWTGTEAVKNGLADEIGGLYSTIYAITDDNNIDDYTVV 538 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 86/210 (40%), Gaps = 14/210 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASA 110 L+ I+ +S DD + +++ L+S S E + + + ++ K VI + Sbjct: 94 NLLTNIKNLSFDDKVSGVVLKLNSNSLSYAQSEELAQELSMLRGADKKVIAYFENVNRK- 152 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ ++ I + S+ + + Y K DK GV + K+ Sbjct: 153 NYYLASYADEIYMPSANST-SVNIYPYFREEFYTKKLSDKFGVKFNIIHVGDYKSYQENL 211 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA--EAKKVG 222 ++ ++ +A + +++ +Y F+ +VS +R + D+ + DG + + + Sbjct: 212 AKDTMSKEAREDSTRILNLNYENFLDIVSLNRKLNRDELDKIIKDGDLVAASSIDLFSNK 271 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 LID + + LG + I+D+ Sbjct: 272 LIDKYSYWDNLV---TLLGGKDKLISIQDY 298 >gi|313608567|gb|EFR84447.1| putative signal peptide peptidase SppA [Listeria monocytogenes FSL F2-208] Length = 203 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 91/185 (49%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P + MAAS GY IS ++ I A++ S+GV+ Q F+ KLGVS ++KS Sbjct: 5 PFYVSMGSMAASGGYYISAPADKIFASKEXXXXSLGVIMQGYDYSEFMKKLGVSDNTIKS 64 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K S + ++MQ ++D SY+ FV++V++ R + +K ++DGRI+ G + Sbjct: 65 GEYKDIMSGTRPMTEDEKKIMQSMIDDSYNEFVKVVAKGRGMSAEKVRKIADGRIYDGRQ 124 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 AK+ GLID G QE+ ++L I+ P + IS D Sbjct: 125 AKENGLIDEFGYQEDALEALKKEQGLADATVIQYDAPEDFSSLFSVAAQKISGQNADISQ 184 Query: 278 LMKQT 282 L+K T Sbjct: 185 LIKLT 189 >gi|89256882|ref|YP_514244.1| putative periplasmic protease [Francisella tularensis subsp. holarctica LVS] gi|115315261|ref|YP_763984.1| putative periplasmic protease [Francisella tularensis subsp. holarctica OSU18] gi|156503057|ref|YP_001429122.1| putative periplasmic protease [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009223|ref|ZP_02274154.1| peptidase family S49 protein [Francisella tularensis subsp. holarctica FSC200] gi|290953621|ref|ZP_06558242.1| putative periplasmic protease [Francisella tularensis subsp. holarctica URFT1] gi|295313054|ref|ZP_06803748.1| putative periplasmic protease [Francisella tularensis subsp. holarctica URFT1] gi|89144713|emb|CAJ80044.1| peptidase family S49 protein [Francisella tularensis subsp. holarctica LVS] gi|115130160|gb|ABI83347.1| S49 family SohB endopeptidase [Francisella tularensis subsp. holarctica OSU18] gi|156253660|gb|ABU62166.1| peptidase, S49 (protease IV) family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 338 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 8/241 (3%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSA-TALIVSLSSPGGSAYAGEAIFRAIQKV 93 + I +G I+ SQ L + I + +IV + SPGG ++++ Sbjct: 94 KIFVINFKGDIDASQVENLRNEVSAILAVANIEDEIIVRIDSPGGVVNGYGFAAAQLERI 153 Query: 94 KNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+++ Sbjct: 154 RQVGINLTVCIDKVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGINV 213 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S K + + + ++S + F + + R P ++ G Sbjct: 214 EMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLDIDKVATGEY 271 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 W G +A ++GL+D + ++ L L ++ ++ + + ++ ++ Sbjct: 272 WFGKDALELGLVDKIQTYDDYLIDL--LKKQHNVYEVSYVIKKEKGFLRSKFSMLKRAIT 329 Query: 273 E 273 Sbjct: 330 N 330 >gi|268323790|emb|CBH37378.1| putative protease, peptidase S49 family [uncultured archaeon] Length = 251 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 13/233 (5%) Query: 35 SPHVARIAIRGQIEDSQE----------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I+G I + LI+ IE A+I ++SPGG+ +A + Sbjct: 9 KGSIAIIPIKGMITSEESVFGLMAASTVLIKDIEEAENKRKIKAVIFEINSPGGTPFASK 68 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I I+K+ KP I V E AAS Y I+ A + IVA E S VGSIG + P + Sbjct: 69 EIATCIEKM--DKPAIAWVREYAASGAYWIASACDEIVADELSTVGSIGAMSIRPDIGEL 126 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + K G+ I+++++ K P+ + + ++++ +D F+ V+++R + K Sbjct: 127 MKKFGIDIETLRTGSYKGLGLPYEKPTEEERELLKKELDEIQDNFLNAVAKNRKLDDAKM 186 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 LS +++ G EAK +GLID +GG+E + + R I D+ K Sbjct: 187 KELSSAKVYLGREAKDMGLIDHLGGKELAIRIAKERSGIRKER-IVDYGERKR 238 >gi|86742603|ref|YP_483003.1| signal peptide peptidase A [Frankia sp. CcI3] gi|86569465|gb|ABD13274.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49 [Frankia sp. CcI3] Length = 682 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 1/197 (0%) Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSL 128 + +SSPGGS A + + R ++ + P+I + ++AAS GY ++ AS+ IVA +L Sbjct: 410 VFRVSSPGGSYVASDLVRREAERFRASGRPLIVSMGDVAASGGYFVALASDAIVANPGTL 469 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 GSIGV + LDK+GV +V SP P + +++ +D Y Sbjct: 470 TGSIGVFAGKQVISGLLDKVGVGFGAVAEGEHALMMSPRRPFTPGEREKLEEFLDRVYAD 529 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 FV V+ +R + D+ L+ GR+WTGA+A GL+DV+GG + + ++ + Sbjct: 530 FVDKVAVARGLSRDQAHQLARGRVWTGADAHAHGLVDVLGGLAQAIELAWSRAGLPAGET 589 Query: 249 IKDWNPPKNYWFCDLKN 265 + PK +++ Sbjct: 590 PRVRLTPKPSVLERVRS 606 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 21/203 (10%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--------KPVITE 102 ++++E + + D + ++ + A IQ+++ I Sbjct: 54 RDVVEGLRYATEDPRVSIVVAHI-------AACGMPLARIQEIRAAIAAFRAAGGTAIAY 106 Query: 103 VHEMAASAG----YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 G Y ++CA + I A G G+ + P+++ LD+LG+S++ + Sbjct: 107 ADTFGEFGGGTAPYYLACAFDEIWLAPPGDCGLTGLGMEAPFLRGALDRLGISVEIGQRY 166 Query: 159 PMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K + + P ++ + +++SS V ++E R + D+ L D G+ Sbjct: 167 EYKNAVNTLVERDFTPAHLEAVSRIIESSSDQIVAGIAEGRGLSTDRVRRLIDLGPLAGS 226 Query: 217 EAKKVGLIDVVGGQEEVWQSLYA 239 A GL+D +G ++EV+ + Sbjct: 227 VALDTGLVDRLGYRDEVYAAARE 249 >gi|120610301|ref|YP_969979.1| serine peptidase [Acidovorax citrulli AAC00-1] gi|120588765|gb|ABM32205.1| protein C [Acidovorax citrulli AAC00-1] Length = 316 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 2/213 (0%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 P A + + + + L I D + + + + SPGGS + I+ + Sbjct: 87 PRTANLEMCETMTSYEGLRRDIRAAINDPTIERIALDIDSPGGSVAGAFELATDIRAMSA 146 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +KP+ V+ M S GYLI+ A + IV + TS VGSIGV+ + +KLGV + +V Sbjct: 147 QKPITGVVNFMGYSGGYLIASACSEIVVSRTSGVGSIGVIASHMDRAALNEKLGVKVTTV 206 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + +P ++ ++++++ D+V+ Y FV V+E R + ++ ++ G Sbjct: 207 FAGAHKNDLTPHEPISEQSLRVLTDLVNEGYEMFVSAVAEYRGMTAAAVRA-TEAGLYRG 265 Query: 216 AEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIR 247 A K GL D + ++ + A+ D++ R Sbjct: 266 DAAIKAGLADRLQSPQDAIDGIAHAVASDRARR 298 >gi|187932068|ref|YP_001892053.1| putative periplasmic protease [Francisella tularensis subsp. mediasiatica FSC147] gi|187712977|gb|ACD31274.1| peptidase family S49 protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 338 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 12/243 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + I +G I+ SQ + I ++ + +IV + SPGG ++ Sbjct: 94 KIFVINFKGDIDASQVENLRNEVSAILAVANTED--EIIVRIDSPGGVVNGYGFAAAQLE 151 Query: 92 KVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ S K + + + ++S + F + + R P ++ G Sbjct: 212 NVEMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLDIDKVATG 269 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W G +A ++GL+D + ++ L L ++ ++ + + ++ + Sbjct: 270 EYWFGKDALELGLVDKIQTYDDYLIDL--LKKQHNVYEVSYVIKKEKGFLRSKFSMLKRA 327 Query: 271 LLE 273 + Sbjct: 328 ITN 330 >gi|15618523|ref|NP_224809.1| protease [Chlamydophila pneumoniae CWL029] gi|15836145|ref|NP_300669.1| protease [Chlamydophila pneumoniae J138] gi|16752427|ref|NP_444686.1| protease IV, putative [Chlamydophila pneumoniae AR39] gi|4376909|gb|AAD18752.1| Protease [Chlamydophila pneumoniae CWL029] gi|7189070|gb|AAF38017.1| protease IV, putative [Chlamydophila pneumoniae AR39] gi|8978985|dbj|BAA98820.1| protease [Chlamydophila pneumoniae J138] Length = 333 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 25/288 (8%) Query: 8 IKTRYVMLSLVT--------LTVVYFSWSSHVED---NSPHVARIAIRGQIEDS------ 50 + V+ +L+ V V+D +P +A I ++ I S Sbjct: 23 VLAFVVIFALIASSLGNGDATFVSLPDAQGEVKDLGKTAPIIAVIEMKDVIASSKNTAKT 82 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMA 107 Q ++E E+ D +++ + PGG + + I+ ++ K RK P+ V+ + Sbjct: 83 IQNILEGFEKAPLKDRVKGIVIDMDCPGGEVFEIDRIYSMLRFWKERKGFPIYIYVNGLC 142 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS GY +SCA+ I A +SL+GSIGV + VK L++ GV + + KA +P Sbjct: 143 ASGGYYVSCAATKIYATSSSLIGSIGVRSGPFFNVKEGLNRYGVESDLLTAGKDKAPMNP 202 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ + Q +D Y FV +V+++R + +K + RI++ +AK+ G ID Sbjct: 203 YTPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTKEKLVHTLGARIFSPEKAKQEGYID 262 Query: 226 VVG-GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 VVG +E+V Q + A+ + ++ + W+ + + + SS L Sbjct: 263 VVGATKEQVLQDIVAVCKIEDNYRVIGSGG--DGWWKRVASAAASSPL 308 >gi|332184305|gb|AEE26559.1| peptidase family S49 protein [Francisella cf. novicida 3523] Length = 338 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 103/243 (42%), Gaps = 12/243 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 V I +G I SQ + I + + +IV + SPGG ++ Sbjct: 94 KVFVINFKGDIHASQVENLRNEVSAILAVVNTED--EVIVRIDSPGGVVNGYGFAAAQLE 151 Query: 92 KVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+ Sbjct: 152 RIRQAGINLTVCIDQVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGI 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 +++ S K + + + ++S + F + + R P ++ G Sbjct: 212 NVEMHTSGEYKRTLTTVGINTEEGRNKFKQDLESIHQLFKKHILVYR--PSLNINKVATG 269 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W G +A ++GL+D + ++ L L + ++ + + ++ + Sbjct: 270 EYWFGKDALELGLVDKIQTYDDYLIDL--LNKHHDVYEVSYVIKKEKGFLRSKLSMLKRT 327 Query: 271 LLE 273 + Sbjct: 328 MTN 330 >gi|33241968|ref|NP_876909.1| proteinase IV [Chlamydophila pneumoniae TW-183] gi|33236478|gb|AAP98566.1| proteinase IV [Chlamydophila pneumoniae TW-183] Length = 330 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 25/288 (8%) Query: 8 IKTRYVMLSLVT--------LTVVYFSWSSHVED---NSPHVARIAIRGQIEDS------ 50 + V+ +L+ V V+D +P +A I ++ I S Sbjct: 20 VLAFVVIFALIASSLGNGDATFVSLPDAQGEVKDLGKTAPIIAVIEMKDVIASSKNTAKT 79 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMA 107 Q ++E E+ D +++ + PGG + + I+ ++ K RK P+ V+ + Sbjct: 80 IQNILEGFEKAPLKDRVKGIVIDMDCPGGEVFEIDRIYSMLRFWKERKGFPIYIYVNGLC 139 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS GY +SCA+ I A +SL+GSIGV + VK L++ GV + + KA +P Sbjct: 140 ASGGYYVSCAATKIYATSSSLIGSIGVRSGPFFNVKEGLNRYGVESDLLTAGKDKAPMNP 199 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 ++ + Q +D Y FV +V+++R + +K + RI++ +AK+ G ID Sbjct: 200 YTPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTKEKLVHTLGARIFSPEKAKQEGYID 259 Query: 226 VVG-GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 VVG +E+V Q + A+ + ++ + W+ + + + SS L Sbjct: 260 VVGATKEQVLQDIVAVCKIEDNYRVIGSGG--DGWWKRVASAAASSPL 305 >gi|160871575|ref|ZP_02061707.1| probable protease SohB [Rickettsiella grylli] gi|159120374|gb|EDP45712.1| probable protease SohB [Rickettsiella grylli] Length = 330 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 12/217 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + V + +G I+ +E+ I+ + D +++ L S GG Sbjct: 84 NANQLKKKVFVLNFQGDIKAHAVNNLREEITALIQVATPQDE---VVLRLESAGGMVAPY 140 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +Q++KN+ P+ + ++AAS GYL++C ++ ++AA +++GSIGV+ Q P Sbjct: 141 GLAASQLQRLKNKHIPLTITIDKIAASGGYLMACVADKLLAAPFAIIGSIGVVAQLPNFH 200 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL K + + + + K + F E KA + Q ++ +H F + +R Sbjct: 201 RFLKKRDIDFELLTAGEYKRTLTLFGENTSKAREKTQADLEEIHHLFKSFIQSNRKK--I 258 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W +A + L+D + ++ L Sbjct: 259 DIHEVATGAHWLAKDALALHLVDALLTSDDYLNQLAE 295 >gi|330828722|ref|YP_004391674.1| putative protease sohB [Aeromonas veronii B565] gi|328803858|gb|AEB49057.1| Probable protease sohB [Aeromonas veronii B565] Length = 335 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 14/258 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSA----TALIVSLSSPGGSAYAGE 84 + D + + G D++E+ E +S +++ L S GG + Sbjct: 82 AKAGDERSRLFVLDFNGS-MDAKEVASLREEVSAVIGVAQPGDEVLLRLESGGGVVHGYG 140 Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q++++R + + ++AAS GY+++C ++ I+AA ++VGSIGV+ Q P Sbjct: 141 LAASQLQRLRDRDIKLTVAIDKVAASGGYMMACVADKILAAPFAIVGSIGVIAQLPNFNK 200 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K + + + K + F E + + ++ + + + F V+E R P Sbjct: 201 LLKKHDIEFEMHTAGQYKRTITMFGENDDLGREKFREELAAIHERFKAFVAEHR--PQLD 258 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ G W ++AK +GL+D + ++ + S K+ + K Sbjct: 259 IDQVTTGEHWLASQAKGLGLVDTLCTSDDYLLA------QASHHKVIGISYRKPKSLTQK 312 Query: 264 KNLSISSLLEDTIPLMKQ 281 + LE + + Q Sbjct: 313 LGQQGAQALEAGLGRLWQ 330 >gi|148259074|ref|YP_001233201.1| acid phosphatase [Acidiphilium cryptum JF-5] gi|326402225|ref|YP_004282306.1| putative peptidase S49 [Acidiphilium multivorum AIU301] gi|146400755|gb|ABQ29282.1| Acid phosphatase [Acidiphilium cryptum JF-5] gi|325049086|dbj|BAJ79424.1| putative peptidase S49 [Acidiphilium multivorum AIU301] Length = 580 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 8/246 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI-QKVKNRKPVITEVHEMA 107 D L I D S A+++ L +PGG+ + + + + KP+I + + Sbjct: 325 DPARLAHEIATAVADPSIRAIVLRLDTPGGTVTGSAMVGAEVARAARLHKPLIVSMGALD 384 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS GY IS ++VA +L GSIGVL L +LGVS+ + S Sbjct: 385 ASGGYWISSHGAVLVADPATLTGSIGVLGGKFSFGGLLARLGVSVSTASRGANALFDSAV 444 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + +Q +D Y FV V+ R + + + GR+WTGA+A+ GL+D + Sbjct: 445 TPWTEAQLASLQGQLDLDYQKFVGWVAAGRRMSPAQVNAVGQGRVWTGAQARSRGLVDRL 504 Query: 228 GGQEEV---WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 GG E ++ L D ++ + P + L +P + Sbjct: 505 GGYHEAFMTVRAALHLPADAALDIVPGNEQPGLAALLATLARQANPLEAAALP----EPL 560 Query: 285 QGLWAV 290 +GL+A+ Sbjct: 561 RGLFAL 566 Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 16/217 (7%) Query: 25 FSWSSHVEDNSPHVA-----RIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGG- 78 F S +++ P VA G ++ I I+R + D + + L GG Sbjct: 55 FILSLNLQTAPPDVAAPSALLRRATGATPTLEQTIAAIDRAATDPRVRGIDILL--GGGC 112 Query: 79 -SAYAGEAIFRAIQKVKN--RKPVIT---EVHEMAASAGYLISCASNIIVAAETSLVGSI 132 E + A+ + + + V+ Y+++ A+N I ++ G Sbjct: 113 CGLTTAEELHDALARFRAISHRQVVARAMSFDGAEGLGAYIVATAANRIELSDAGDFGVT 172 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP--KAVQMMQDVVDSSYHWFV 190 G+ Q P+ L GV + K P F+ P A +MM + S Y + Sbjct: 173 GLALQSPFAADLLKMAGVEAQFEHIGKYKTYPELFTRSGPSAAATEMMNSLAGSLYDSAL 232 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ D+ L D ++ A+AK+ GL+D V Sbjct: 233 VPIAARLKRSPDQVKALFDQAPFSAAQAKQDGLVDTV 269 >gi|198283216|ref|YP_002219537.1| putative periplasmic protease [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666621|ref|YP_002425447.1| type IV pilin biogenesis peptidase, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247737|gb|ACH83330.1| Peptidase S49 domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518834|gb|ACK79420.1| type IV pilin biogenesis peptidase, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 334 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 97/230 (42%), Gaps = 10/230 (4%) Query: 38 VARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + +G I S +E I I + ++ +++ L S GG + + Sbjct: 95 TYLLDFKGDIRASAVSALREEISAIIQAAKPGDT--VLLRLESGGGMVNTYGLASAQLLR 152 Query: 93 VKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 ++ K + V +AAS GY+++ ++ IVA+ +L+GSIGV+ Q P +L + Sbjct: 153 LRAAKIHLTVLVDAVAASGGYMMAVTADRIVASPFALIGSIGVVAQIPNFHRWLQDRNID 212 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + K + F E +++ ++ ++ F V + R P ++ G Sbjct: 213 WEQFTAGKFKRTVTLFGENTETGRAKLREELEETHAQFRDFVQQYR--PQLDLEQVATGE 270 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 W G +A+++GL+D + +E+ G ++ + P+ Sbjct: 271 AWLGNKARQLGLVDDLATSDEIILEAVRQGKVLALHYQRQKTLPQRLGLA 320 >gi|167034552|ref|YP_001669783.1| putative periplasmic protease [Pseudomonas putida GB-1] gi|166861040|gb|ABY99447.1| Peptidase S49 domain protein [Pseudomonas putida GB-1] Length = 339 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 88 AEDKGRVFVLDFDGDIKASATESLRNEITALLTLATPRDE---VVLRLESGGGLVHSYGL 144 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V Sbjct: 145 AASQLARIRQAGIPLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRL 204 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E K + Q+ +D ++ F V+ R P Sbjct: 205 LKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVARYR--PQLHI 262 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 263 DEVATGEVWLGVAALNRKLVDELQTSDEYLSERARNA 299 >gi|114766960|ref|ZP_01445880.1| Periplasmic serine protease [Pelagibaca bermudensis HTCC2601] gi|114540867|gb|EAU43929.1| Periplasmic serine protease [Roseovarius sp. HTCC2601] Length = 457 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 84/217 (38%), Gaps = 15/217 (6%) Query: 38 VARIAIRGQ-------IEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 VA I I G I +S + + ++ + + + + S GG Sbjct: 80 VAVIPITGSLIHRGSYIGESFSGNQTYEGISAQLTAAAESPMVRGVALEIDSFGGEVAGC 139 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ + +KPV + A SA Y I+ ++ I+ + GSIGV+ + Sbjct: 140 FELADEIRALSAQKPVWAFISAHAFSAAYAIASQADRIIIPRSGGAGSIGVICMHADQSE 199 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ GV + + + K + +P+ + + +Q + F V+E R Sbjct: 200 RLEANGVRVTVISAGAHKGDGNPYEPLPEAVREDLQRECEDLRQLFAETVAEGRGDRLTL 259 Query: 204 TLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+ R + GA+A + GL D V ++ A Sbjct: 260 EAALATEARTFIGAQAVEAGLADEVDNPRAAFERFVA 296 >gi|213967047|ref|ZP_03395197.1| peptidase, U7 family [Pseudomonas syringae pv. tomato T1] gi|301385232|ref|ZP_07233650.1| putative periplasmic protease [Pseudomonas syringae pv. tomato Max13] gi|302130173|ref|ZP_07256163.1| putative periplasmic protease [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928369|gb|EEB61914.1| peptidase, U7 family [Pseudomonas syringae pv. tomato T1] Length = 340 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 35 SPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 90 KARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQ 147 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 148 LARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 207 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 208 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 265 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 266 TGEVWLGMAAVDKLLVDELKTSDEYLAERARQA 298 >gi|118593769|ref|ZP_01551138.1| Peptidase U7 [Stappia aggregata IAM 12614] gi|118433679|gb|EAV40342.1| Peptidase U7 [Stappia aggregata IAM 12614] Length = 294 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 17/220 (7%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 S + A I + G + + + + +++ I+ D+ +I+ ++S GG A Sbjct: 70 SGNTALITVDGSLVNRGAWIGTNSGLTSYEGIAAQVDDIAADNDIRNVIIDMNSYGGEAT 129 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I+K+++ K VI V+++AASAGY I+ A++ IV + TSLVGSIGV+ + Sbjct: 130 GMSTLAAKIRKLRSTKTVIAVVNDVAASAGYGIASAADEIVVSPTSLVGSIGVVMLHLDR 189 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR---N 198 L+ G+ + + K + + F ++ + MQ V + Y F+ V R Sbjct: 190 SNELEAKGIKPTLIHAGAKKVDGNSFEPLSDNVREDMQKDVMAFYADFLNTVEAGRSSWR 249 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + DK ++ ++ G EA GL D +G EEV L Sbjct: 250 LSADKARK-TEADVFIGNEAISAGLADRLGTLEEVLAELA 288 >gi|332993012|gb|AEF03067.1| putative inner membrane peptidase [Alteromonas sp. SN2] Length = 342 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 117/252 (46%), Gaps = 14/252 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEA 85 + E+ + I +G D+ E+ E I+ + ++V L S GG + Sbjct: 89 NDEEEKSRLFVIDFKGS-MDANEVEHLREEITAILCVANKEDEVLVRLESGGGVVHGYGL 147 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q++K + + V ++AAS GY+++C ++ ++A++ + +GSIGVL Q P Sbjct: 148 AASQLQRIKEKGLTLTIAVDKVAASGGYMMACVADKLLASQFAYIGSIGVLAQLPNFNKL 207 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K V + + K + F E N + ++ ++ + F V R P Sbjct: 208 LKKNDVEFEQHTAGEYKRTLTVFGENNDEGRAKFKEEIEEIHTLFKDFVHSQR--PDMNI 265 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 ++ G W G +AK++GL+D + ++ S + ++ I K+K ++ KN + Sbjct: 266 EKVATGEYWPGVKAKELGLVDALSTSDDYILSHF---PEREIFKVK-YSLKKN--VAEKL 319 Query: 265 NLSISSLLEDTI 276 LS++++ E + Sbjct: 320 GLSVAAVAERVV 331 >gi|117926027|ref|YP_866644.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609783|gb|ABK45238.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 410 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVS 72 SS + +A + I G + + E++ + D + A+++ Sbjct: 51 DHSSDLMVTPNGIAIVPIHGTLVKRVGAVEAASGLMSYASIEEKLLDAATDPAVRAILMD 110 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + IQ+ KP+ + A SA YLI+ ++ I+ +T+ VGSI Sbjct: 111 IDSPGGEVGGVFDLAAMIQEAGQGKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSI 169 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + K G S +V + K + S + ++ A +Q VD Y F + Sbjct: 170 GVIAAHVDESEKDAKEGRSYTTVFAGAHKNDFSSHAPLSDAARFNLQQEVDRLYGMFTGM 229 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS---IRKI 249 V+ RNI ++ ++ G A K GL D VG + L L + K+ Sbjct: 230 VASGRNISETAVRA-TEAGLFFGDNAVKAGLADHVGTIRDALAGLTTLIESPKRTFMHKL 288 Query: 250 KDWNPPKNYWFCDLK 264 + P + DL Sbjct: 289 EATMPTDDTPVLDLP 303 >gi|148547143|ref|YP_001267245.1| putative periplasmic protease [Pseudomonas putida F1] gi|148511201|gb|ABQ78061.1| Peptidase S49, N-terminal domain protein [Pseudomonas putida F1] Length = 339 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 88 AEDKSRVFVLDFDGDIKASATESLRNEITALLTLATARDE---VVLRLESGGGLVHSYGL 144 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V Sbjct: 145 AASQLARIRQAGIPLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRL 204 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E K + Q+ +D ++ F VS R P Sbjct: 205 LKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVSRYR--PQLHI 262 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 263 DEVATGEVWLGVAALNRKLVDELQTSDEYLSERARNA 299 >gi|167739953|ref|ZP_02412727.1| peptidase S49 [Burkholderia pseudomallei 14] Length = 316 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 1/186 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + DD+ +++ + SPGGS Y + I + + RKP+ + +AAS Y Sbjct: 83 FAQTFRTALADDAVGGIVLDVDSPGGSVYGVTELADEIYRSRARKPIFAVANSLAASGAY 142 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ VG IGV + + L K G+ + + K E +PF + Sbjct: 143 WIASAASEFYVTPGGEVGDIGVHDIHVDLSKGLQKAGIETTLIAAGKYKTEGNPFHPLGA 202 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQE 231 A MQ VD+ Y FV V++ RN+P + GR+ AK+ ++D V + Sbjct: 203 DARAAMQKRVDAYYRAFVAAVAKHRNVPESAVRNGMGQGRLLDAERAKRESMVDGVATLD 262 Query: 232 EVWQSL 237 EV L Sbjct: 263 EVIDGL 268 >gi|313498180|gb|ADR59546.1| Putative periplasmic protease [Pseudomonas putida BIRD-1] Length = 339 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 88 AEDKSRVFVLDFDGDIKASATESLRNEITALLTLATARDE---VVLRLESGGGLVHSYGL 144 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V Sbjct: 145 AASQLARIRQAGIPLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRL 204 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E K + Q+ +D ++ F VS R P Sbjct: 205 LKKHDIDFEVLTAGEYKRTLTIFGENTEKGREKFQEDLDITHQLFKDFVSRYR--PQLHI 262 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 263 DEVATGEVWLGVAALNRKLVDELQTSDEYLSERARNA 299 >gi|260844235|ref|YP_003222013.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|260868584|ref|YP_003234986.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] gi|257759382|dbj|BAI30879.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257764940|dbj|BAI36435.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] Length = 501 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ VD+++ F V+ + + Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRVDAAHRMFAEKVAMYTGLSVEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G A K GL D + + + A Sbjct: 258 TG-TEAAVFEGQSAIKAGLADELINASDAISVMAA 291 >gi|288941275|ref|YP_003443515.1| peptidase S49 [Allochromatium vinosum DSM 180] gi|288896647|gb|ADC62483.1| peptidase S49 [Allochromatium vinosum DSM 180] Length = 338 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 15/227 (6%) Query: 37 HVARIAIRGQIEDSQE------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + I G I S+ + ++ D ++V L + GG + Sbjct: 97 RLFIIEFNGDIRASEVSALRVLVTTLLQEARAGDQ---VLVRLDNAGGMVSEHGLAASQL 153 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ R P+ V ++AAS GYL++C ++ I+AA +++GSIGVL + P L++ G Sbjct: 154 ARLRARGIPLTIAVDKVAASGGYLMACVADRIIAAPFAVIGSIGVLAELPNFHRVLERYG 213 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 V + + K + F E + Q +++ ++ ++ F VSE R P ++ Sbjct: 214 VDFELHTAGEYKRTLTLFGENTDEGRQKLREQLEETHRLFKAFVSEYR--PGLDLERVAT 271 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G W G A ++GL+D + ++ G + + K+K K Sbjct: 272 GEYWHGRRAVELGLVDAIQTSDDFILEA---GAEMELLKLKYRAHKK 315 >gi|170770009|ref|ZP_02904462.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] gi|170770149|ref|ZP_02904602.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] gi|170120975|gb|EDS89906.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] gi|170121075|gb|EDS90006.1| head-tail preconnector protein GP5 [Escherichia albertii TW07627] Length = 501 Score = 191 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ VD+++ F V+ + + Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRVDAAHRMFAEKVAMYTGLSVEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G A K GL D + + + A Sbjct: 258 TG-TEAAVFEGQSAIKAGLADELINASDAISVMAA 291 >gi|121996911|ref|YP_001001698.1| putative periplasmic protease [Halorhodospira halophila SL1] gi|121588316|gb|ABM60896.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Halorhodospira halophila SL1] Length = 335 Score = 191 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 7/216 (3%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED--SQELIERIER--ISRDDSATALIVSLSSPGGSAY 81 S + E + + RG I + L E I + +I+ L SPGG Sbjct: 78 SETPPAELPDKRIYVLEFRGDIRARAVEGLREEITAVIAAARPGQDEVILRLESPGGGVP 137 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A + +++ + V +AAS GYL++ + IVAA +L+GSIGV+ P Sbjct: 138 AYGLAASQLARLREAGIHLTVCVDRVAASGGYLMAVVGDRIVAAPFALIGSIGVVGSLPN 197 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +L + + + P K + F E + ++ + + F + R P Sbjct: 198 FHRWLRNRDIDFEQHTAGPYKRTLTVFGENTEADRERFREDLGHIHEQFKGFLRRYR--P 255 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G W A + GLID + ++ + Sbjct: 256 QLDVETVATGEFWLAERALEAGLIDALQTSDDCIMA 291 >gi|114765597|ref|ZP_01444698.1| Periplasmic serine protease [Pelagibaca bermudensis HTCC2601] gi|114542046|gb|EAU45079.1| Periplasmic serine protease [Roseovarius sp. HTCC2601] Length = 457 Score = 191 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 84/217 (38%), Gaps = 15/217 (6%) Query: 38 VARIAIRGQ-------IEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 VA I I G I +S + + ++ + + + + S GG Sbjct: 80 VAVIPITGSLIHRGSYIGESFSGNQTYEGISAQLTAAAESPMVRGVALEIDSFGGEVAGC 139 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ + +KPV + A SA Y I+ ++ I+ + GSIGV+ + Sbjct: 140 FELADEIRALSAQKPVWAFISAHAFSAAYAIASQADRIIIPRSGGAGSIGVICMHADQSE 199 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L+ GV + + + K + +P+ + + +Q + F V+E R Sbjct: 200 RLEANGVRVTVISAGAHKGDGNPYEPLPEAVREDLQRECEDLRQLFAETVAEGRGDRLTL 259 Query: 204 TLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+ R + GA+A + GL D V ++ A Sbjct: 260 EAALATEARTFIGAQAVEAGLADEVDNPRAAFERFVA 296 >gi|254786154|ref|YP_003073583.1| periplasmic protease [Teredinibacter turnerae T7901] gi|237686261|gb|ACR13525.1| putative protease SohB [Teredinibacter turnerae T7901] Length = 353 Score = 191 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 10/223 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + V G I S+ E+I I ++ ++V L S GG ++ Sbjct: 102 HKKRVFVTNFDGDIRASETENLREVITSILSLATPQD--EVVVRLESQGGMVHSYGFAAS 159 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ + P+ V +AAS GY+++C ++ IV+A +++GSIGV+ Q P L K Sbjct: 160 QLSRIREKNIPLTVCVDMVAASGGYMMACVADKIVSAPFAILGSIGVVAQLPNFHRLLKK 219 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 V + + + K + F E K Q + ++ ++ F + +R I + Sbjct: 220 HDVDYEMLTAGEYKRTLTMFGENTDKGRQKFVEDLEDTHTLFKDFIRSNRAIV--DVDAV 277 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 + G +W G A + L+D + ++ LY+ I ++ Sbjct: 278 ATGEVWFGQRALEAKLVDCIQTSDQYLVDLYSEADVFEIEFVE 320 >gi|33770512|ref|NP_892049.1| capsid protein [Yersinia phage PY54] gi|33636095|emb|CAD91764.1| capsid protein [Yersinia phage PY54] Length = 303 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 15/216 (6%) Query: 38 VARIAI-------RGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I + RGQI + + + + + D S + +++ + GG+ Sbjct: 65 IAVIPVHGILVPRRGQITQACTELTSYERIRAQFTKALNDPSVSEIVLDFYTGGGAVSGC 124 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + + I ++ KP V+ A SAGY ++ A + IV + TS VGSIGV+ ++ Sbjct: 125 KELADYIFASRSVKPSTAIVNYNAFSAGYFMASACSRIVVSHTSGVGSIGVILEHMEASK 184 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +++G+ + K SP + +A +Q ++D +Y F V+E R I + Sbjct: 185 LEEQIGLKFTTFYRGDFKNAGSPHEPLTDEATAYLQQLIDDAYETFTTSVAEYRGIDVQR 244 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + R + G A GL D + + ++ A Sbjct: 245 VID-TQARTFFGQAAVDAGLADELSDPQTAINNIAA 279 >gi|26990627|ref|NP_746052.1| putative periplasmic protease [Pseudomonas putida KT2440] gi|24985612|gb|AAN69516.1|AE016585_8 sohB protein, peptidase U7 family [Pseudomonas putida KT2440] Length = 339 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 88 AEDKSRVFVLDFDGDIKASATESLRNEITALLTLATARDE---VVLRLESGGGLVHSYGL 144 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V Sbjct: 145 AASQLARIRQAGIPLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRL 204 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E K + Q+ +D ++ F VS R P Sbjct: 205 LKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKYQEDLDITHQLFKDFVSRYR--PQLHI 262 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 263 DEVATGEVWLGVAALNRKLVDELQTSDEYLSERARNA 299 >gi|220921986|ref|YP_002497287.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219946592|gb|ACL56984.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 302 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 15/228 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED-------------SQELIERIERISRDDSATALIVS 72 + + V VA + +RG I + ++ + RD A+++ Sbjct: 50 AQAKEVARREGAVAVLPLRGVIANRMNLMGDISGGTSAEAFRHAFQGALRDPEVKAIVLD 109 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG+ + + I + KP++ V AASA Y I+ A++ +V T VGSI Sbjct: 110 VDSPGGAVSGSDELSSMIFAARGTKPIVAHVDATAASAAYWIASAADEVVVTPTGAVGSI 169 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV + + +KLGV + + KA+ ++ A+ Q V+++Y FVR Sbjct: 170 GVFGIHDDLSGAREKLGVKRTIISAGRFKADG-VAGPLDDAALARRQARVEAAYDMFVRA 228 Query: 193 VSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ +RN+ G + A A G+ D +G +E Q L A Sbjct: 229 VARNRNVSLSAVRDGFGQGDMVDAAPAVAEGMADRLGTLDETLQRLGA 276 >gi|289208920|ref|YP_003460986.1| peptidase S49 [Thioalkalivibrio sp. K90mix] gi|288944551|gb|ADC72250.1| peptidase S49 [Thioalkalivibrio sp. K90mix] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 15/256 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSAYA 82 V+ P V + G I S +E I I ++R +IV L SPGG + Sbjct: 102 DESVDKERPRVYVLRFTGDIRASSVDSLREEITAILTLAR-PEQDRVIVCLESPGGLVPS 160 Query: 83 GEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + +++ + + V +AAS GY+++ ++ IVAA +++GSIGV+ Q P + Sbjct: 161 YGLAASQLARLREKGLDLTVAVDRVAASGGYMMAAVADRIVAAPFAVLGSIGVVAQIPNL 220 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 +L++ + ++ + + K + E + + ++ +D ++ F +S R P Sbjct: 221 HRWLERHDIDVELLTAGEYKRTLTVLGENTDEGRRKFREQLDEAHDQFKTFLSRYR--PS 278 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFC 261 ++ G W G +A ++GL D + +++ L + + +I P + Sbjct: 279 LDLEKVATGEHWYGEQAHQLGLADELRTSDDL---LLETSREADLFEITYTRPQR---LS 332 Query: 262 DLKNLSISSLLEDTIP 277 L++ S++E + Sbjct: 333 RRITLAMESIVERVLR 348 >gi|77164361|ref|YP_342886.1| putative periplasmic protease [Nitrosococcus oceani ATCC 19707] gi|254433532|ref|ZP_05047040.1| peptidase family S49 N-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882675|gb|ABA57356.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Nitrosococcus oceani ATCC 19707] gi|207089865|gb|EDZ67136.1| peptidase family S49 N-terminal domain protein [Nitrosococcus oceani AFC27] Length = 325 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 16/248 (6%) Query: 30 HVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + + + V + G I + +E+ + + +D +++ L S GG + Sbjct: 80 NKQKYTKRVFVLDFHGDIRATAVASLREEITAVLSVATPEDE---ILLRLESGGGLVHEY 136 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 +++++ ++ P+I V ++AAS GY+++C N I+AA +++GSIG L Q P Sbjct: 137 GLAASQLERIRKKQIPLIIAVDKIAASGGYMMACVGNRIIAAPFAIIGSIGALMQVPNFH 196 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 LDK G+ + +K+ +K + F + ++ + V+ + F V+ R P Sbjct: 197 RLLDKHGIDFEQIKAGELKRTVTLFGINTDQDRELAKKQVEDIHQLFKEFVARYR--PDM 254 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + G+ W +AKK+ LID + ++ + + K + Sbjct: 255 DLSQTATGQHWHAIQAKKLNLIDDLETSDDYLAEACKTANLYKVT----YTVKKTFAERF 310 Query: 263 LKNLSISS 270 L +S Sbjct: 311 LARTQAAS 318 >gi|2499883|sp|Q44600|SOHB_BUCSC RecName: Full=Probable protease sohB gi|769834|gb|AAA92792.1| Soh B protease [Buchnera aphidicola] Length = 305 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 12/212 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAG 83 ++ N+P + + +G + S+ E+ I +D +++ L S GG + Sbjct: 96 YLNQNNPILYVLDFKGNVSASEVTSLREEISAIILAAKENDE---VLLRLESGGGVIHGY 152 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ + + V ++AAS GY+++C +N I+AA S++GSIGV+ Q P Sbjct: 153 GLASSQLSRLREKNIRLTVSVDKIAASGGYMMACVANYIIAAPFSVIGSIGVVAQIPNFN 212 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L K V ++ S K + F E +A + ++ ++ F V R P Sbjct: 213 KLLKKNNVDMELHTSGLYKRTLTVFGENTKEAREKFCKDLNFTHVLFKEFVHSMR--PSL 270 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +S G W G A + LID + ++ Sbjct: 271 NIDEVSTGEHWFGTTALEKKLIDKIETSDDFI 302 >gi|325272247|ref|ZP_08138665.1| putative inner membrane peptidase [Pseudomonas sp. TJI-51] gi|324102619|gb|EGC00048.1| putative inner membrane peptidase [Pseudomonas sp. TJI-51] Length = 341 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 D V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 90 ADEQGRVFVLDFDGDIKASATESLRNEITALLTLATARDE---VVLRLESGGGLVHSYGL 146 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ P+ + ++AAS GY+++C + IV+A +++GSIGV+ Q P V Sbjct: 147 AASQLARIRQAGIPLTVCIDKVAASGGYMMACIGDKIVSAPFAVLGSIGVVAQLPNVNRL 206 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K + + + + K + F E K + Q+ +D ++ F V+ R P Sbjct: 207 LKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVARYR--PQLHI 264 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 265 DEVATGEVWLGVAALNRQLVDTLQTSDEYLSERARNA 301 >gi|291460898|ref|ZP_06025776.2| protease IV [Fusobacterium periodonticum ATCC 33693] gi|291380138|gb|EFE87656.1| protease IV [Fusobacterium periodonticum ATCC 33693] Length = 588 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 14/238 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIV 71 + + ++D+ V I + G I ++Q E I ++ + A+++ Sbjct: 302 YYQEATLDDSDNIVYVIPLEGDIVEAQTEIFSGEANINVNETIAKLNTAKENKKIKAVVL 361 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++SPGGSA + I ++++ + KPV + +AAS GY IS +N I ++ GS Sbjct: 362 RVNSPGGSALTSDIIAEKVKELASEKPVYVSMSSVAASGGYYISANANKIYVDRNTVTGS 421 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 +GV+ L GV+++ + S + K + + Y F+ Sbjct: 422 VGVVSVLVDYSSLLKDNGVNVEKISEGEYSDLYSADT-FTEKKYNKIYNSNLKVYEDFLN 480 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 +VS R I ++ L++GR+WTG EA K GL D +GG + + + Sbjct: 481 VVSNGRKIDKERLKELAEGRVWTGTEAVKNGLADEIGGLYSTIYGVTEDNNIEDYTVV 538 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 85/210 (40%), Gaps = 14/210 (6%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASA 110 L+ I+ +S DD + +++ L+S S E + + + ++ K VI + Sbjct: 94 NLLTNIKNLSFDDKVSGVVLKLNSNSLSYAQSEELAQELSMLRGADKKVIAYFENVNRK- 152 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ ++ I + S+ + + Y K DK GV + K+ Sbjct: 153 NYYLASYADEIYMPSANST-SVNIYPYFREEFYTKKLSDKFGVKFNIIHVGDYKSYQENL 211 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGA--EAKKVG 222 ++ ++ +A + +++ +Y F+ +VS +R + D + DG + + + Sbjct: 212 AKDTMSKEAREDSTRILNLNYENFLDIVSLNRKLNRDDLDKIIKDGDLVAASSIDLFNNK 271 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 LID + + LG + I+D+ Sbjct: 272 LIDKYSYWDNLV---TILGGKDKLVSIQDY 298 >gi|104781391|ref|YP_607889.1| putative periplasmic protease [Pseudomonas entomophila L48] gi|95110378|emb|CAK15086.1| putative peptidase, S49 family [Pseudomonas entomophila L48] Length = 338 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 12/218 (5%) Query: 37 HVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 V + G I+ S E+ + + D +++ L S GG ++ + Sbjct: 92 RVFVLDFDGDIKASATESLRNEITALLTLATPQDE---VVLRLESGGGLVHSYGLAASQL 148 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++ P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L K Sbjct: 149 ARIREAGVPLTICIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQMPNVNRLLKKHD 208 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + + K + F E K + Q+ +D ++ F V+ R P ++ Sbjct: 209 IDFEVLTAGEYKRTLTVFGENTDKGREKFQEDLDITHQLFKDFVARYR--PQLHIDEVAT 266 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 G +W G A L+D +G +E +R Sbjct: 267 GEVWLGIAALNRQLVDELGTSDEYLSQRAREANLFHLR 304 >gi|326794648|ref|YP_004312468.1| peptidase S49 domain protein [Marinomonas mediterranea MMB-1] gi|326545412|gb|ADZ90632.1| Peptidase S49 domain protein [Marinomonas mediterranea MMB-1] Length = 337 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 104/231 (45%), Gaps = 15/231 (6%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + V + G I+ S +E+ + ++DD ++V L S GG ++ Sbjct: 84 ATDKKKVFVLDFDGDIKASAVESMRREITAILAVATKDDE---VVVRLESGGGMVHSYGL 140 Query: 86 IFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +Q++K+ + V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + Sbjct: 141 AASQLQRIKDAGVSLTICVDKVAASGGYMMACVADKIIAAPFAILGSIGVVAQIPNIHRL 200 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LDK + ++ + K + E + + + ++ ++ F V+ R Sbjct: 201 LDKNNIDVELHTAGKFKRTLTVIGENTDEGREKFKQDLEDTHVLFKDFVASQR--AVLDI 258 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ G W G++A + LID V + Y + ++ K++ P Sbjct: 259 ESVATGETWYGSQAVENKLIDEVKTSDTYIVDQY---DNANVFKVEYSEPK 306 >gi|209694710|ref|YP_002262638.1| putative periplasmic protease [Aliivibrio salmonicida LFI1238] gi|208008661|emb|CAQ78846.1| probable protease SohB [Aliivibrio salmonicida LFI1238] Length = 353 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 10/204 (4%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + +G I+ + E + I I+ + +++ L S GG + + Sbjct: 106 RLFVLDFKGSIDAKEVAGLREEVSAILAIAVEGD--EVLLRLESGGGMVHGYGLASSQLD 163 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++++ + V ++AAS GY+++C I+AA ++VGSIGV+ Q P L + + Sbjct: 164 RLRDANITLTISVDKVAASGGYMMACIGEKIIAAPFAIVGSIGVVAQLPNFSKLLKRNDI 223 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + K + F E + KA + Q ++ ++ F + E R ++ G Sbjct: 224 EFEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHVLFKDFIHEHR--ADLDLEKVATG 281 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVW 234 W G +A ++GLID + ++ Sbjct: 282 EHWFGKQALELGLIDAIQTSDDYV 305 >gi|269302396|gb|ACZ32496.1| putative signal peptide peptidase SppA, 36K type [Chlamydophila pneumoniae LPCoLN] Length = 333 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 25/288 (8%) Query: 8 IKTRYVMLSLVT--------LTVVYFSWSSHVED---NSPHVARIAIRGQIEDS------ 50 + V+ +L+ V V+D +P +A I ++ I S Sbjct: 23 VLAFVVIFALIASSLGNGDATFVSLPDAQGEVKDLGKTAPIIAVIEMKDVIASSKNTAKT 82 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEVHEMA 107 Q ++E E+ D +++ + PGG + + I+ ++ K RK P+ V+ + Sbjct: 83 IQNILEGFEKAPLKDRVKGIVIDMDCPGGEVFEIDRIYSMLRFWKERKGFPIYIYVNGLC 142 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS GY +SCA+ I A +SL+GSIGV + VK L++ GV + + KA +P Sbjct: 143 ASGGYYVSCAATKIYATSSSLIGSIGVRSGPFFNVKEGLNRYGVESDLLTAGKDKAPMNP 202 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + Q +D Y FV +V+++R + +K + RI++ +AK+ G ID Sbjct: 203 YIPWTSHDREERQATLDFLYGQFVDIVTQNRPLLTKEKLVHTLGARIFSPEKAKQEGYID 262 Query: 226 VVG-GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 VVG +E+V Q + A+ + ++ + W+ + + + SS L Sbjct: 263 VVGATKEQVLQDIVAVCKIEDNYRVIGSGG--DGWWKRVASAAASSPL 308 >gi|320176913|gb|EFW51941.1| Head-tail preconnector protein GP5 [Shigella dysenteriae CDC 74-1112] Length = 490 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|218694807|ref|YP_002402474.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli 55989] gi|218351539|emb|CAU97251.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli 55989] Length = 501 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 90/215 (41%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G + GL D + + + A Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMAA 291 >gi|220934776|ref|YP_002513675.1| putative periplasmic protease [Thioalkalivibrio sp. HL-EbGR7] gi|219996086|gb|ACL72688.1| putative periplasmic protease [Thioalkalivibrio sp. HL-EbGR7] Length = 334 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 11/222 (4%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++N P V + G I + QE+ + + ++ + S GG Sbjct: 88 DENRPRVFVLRFHGDIRATHVDNLRQEVSAVLTQAR--PGQDRVVACIESGGGLVAPYGL 145 Query: 86 IFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +++ + V +AAS GYL++ +N IVAA ++VGSIGV+ Q P V Sbjct: 146 GAAQLARLREAGVDLTVAVDRVAASGGYLMAAVANRIVAAPFAIVGSIGVVAQIPNVNRL 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + V I+ + K + E P+ + + ++ + F + R P Sbjct: 206 LKRHDVDIEMHTAGQFKRTLTVLGENTPEGREKFKQELEEIHALFKGYLKRYR--PTLDL 263 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 L+ G W G +A +GL+D + +++ L + Sbjct: 264 DKLATGEHWYGEQALPLGLVDELATSDDLLMGLSKEADLYEV 305 >gi|152995733|ref|YP_001340568.1| putative periplasmic protease [Marinomonas sp. MWYL1] gi|150836657|gb|ABR70633.1| Peptidase S49 domain protein [Marinomonas sp. MWYL1] Length = 347 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 12/244 (4%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + G I+ S + + + I I ++V L S GG + +Q Sbjct: 97 KKRLYVLDFDGDIKASAVETMRKEITAILSVAKPQDEVVVRLESGGGVVHGYGLAASQLQ 156 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ P+ V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P + LDK + Sbjct: 157 RIREANIPLTICVDKVAASGGYMMACVADKIIAAPFAILGSIGVVAQVPNLHRLLDKSLI 216 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + E + + + ++ ++ F R VS R P ++ G Sbjct: 217 DVELHTAGKYKRTLTMLGENTDEGREKFKQDLEDTHGLFKRFVSSQR--PQLDIEDIATG 274 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 W G+EA + LIDVV + S Y ++ + + LS S Sbjct: 275 DTWYGSEAIENKLIDVVMTSDAYLVSHYENA------EVIQVTYKQPKGMAERLGLSFFS 328 Query: 271 LLED 274 LE Sbjct: 329 ALEQ 332 >gi|319405933|emb|CBI79564.1| putative capsid protein of prophage [Bartonella sp. AR 15-3] Length = 361 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 20/252 (7%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +VA + + G + + L A+++ + S GG A Sbjct: 65 RNNVAILPVHGTLVRRSAWLGSLSGLTSYEGLSASFREAMAQPDVRAVLLDIDSGGGEAG 124 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+C+++ I A T +VGSIGV+ + Sbjct: 125 GVFDLVEEFQTLSKQYNKPIWAHANEFACSAAYAIACSASQIWVARTGVVGSIGVVCAHL 184 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G+ V K +P ++ A MQ Y FV V+++R + Sbjct: 185 DQSRADEKHGLKWTFVFEGDHKVHGNPHEPLSDTAQIKMQADCALLYEMFVDWVAQNRPL 244 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D + + G +A K+GL D G + ++L D + KN W Sbjct: 245 NADAIRD-TKAETFIGTQALKLGLADAQGTLAQALEALT----DSISQNPIATEEGKNTW 299 Query: 260 FCDLKNLSISSL 271 L + Sbjct: 300 HAQNTALQKRKM 311 >gi|218700220|ref|YP_002407849.1| head-tail preconnector protein GP5 [Escherichia coli IAI39] gi|218370206|emb|CAR18001.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli IAI39] Length = 501 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ VD+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRVDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G + GL D + + + A Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMAA 291 >gi|134288686|ref|YP_001111084.1| gp5, prophage LambdaMc01, peptidase, U7 family [Burkholderia phage phi644-2] gi|134132071|gb|ABO60868.1| gp5, prophage LambdaMc01, peptidase, U7 family [Burkholderia phage phi644-2] Length = 322 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 11/225 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 L ++ ++ + S S+H+ P + + L + + D + +++ + Sbjct: 78 LDIIPVSGILVSRSAHMNPCEP----------MTSYEGLRAAVNQAVADPAVEHIVLDID 127 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS VGSIGV Sbjct: 128 SNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASQVIVSRTSGVGSIGV 187 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + V ++ G+ + SV + K + +P ++ +++ + +V +SY FV ++ Sbjct: 188 IANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLAFLTSMVQNSYKQFVDAIA 247 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + I+ G + + GL D V + + A Sbjct: 248 NFRGLSTQAVKD-TQAGIFFGQKGVEAGLADSVETPQAAINRIAA 291 >gi|327253287|gb|EGE64936.1| head-tail preconnector protein GP5 [Escherichia coli STEC_7v] Length = 501 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQKRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|227540619|ref|ZP_03970668.1| protease IV [Sphingobacterium spiritivorum ATCC 33300] gi|227239558|gb|EEI89573.1| protease IV [Sphingobacterium spiritivorum ATCC 33300] Length = 473 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 11/203 (5%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED---------SQ 51 ++ V K++ + T++++ + +S + VA + G I S Sbjct: 271 IDEVKKRLNIKDKKKDFSTVSILDYRANSTTSEGEGRVAVLYAEGDIVSGEGESGQIASD 330 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ + ++ DD A++ ++SPGGSA A + I+R + K KP+I + + AAS G Sbjct: 331 KVSRELRKLREDDRVKAVVFRVNSPGGSALASDVIWREVILTKKVKPIIVSMGDYAASGG 390 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL-DKLGVSIKSVKSSPMKAEPS-PFSE 169 Y IS A++ I A ++ GSIGV P K L DKLG+ VK+ S P Sbjct: 391 YYISAAADSIFAERNTITGSIGVFGLIPNFKGLLNDKLGIHFDGVKTGAYADLMSAPDRP 450 Query: 170 VNPKAVQMMQDVVDSSYHWFVRL 192 + + ++Q V+ +Y F + Sbjct: 451 LTAEERNIIQLEVNKTYGSFTKK 473 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 41/285 (14%) Query: 1 MEFVLKKIKTRY---VMLSLVTLTVVYFSWSSHVEDNSPHVA-----RIAIRGQIEDS-- 50 +++VL I V+L +V ++ SS D +P VA I + +I++ Sbjct: 5 LKYVLATITGIVIATVILFIVIAGIIGSLISSASTDAAPVVADNSVLYITLNHEIKERSE 64 Query: 51 --------------------QELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRA 89 +++ERI+ D + +++ S + +A + I A Sbjct: 65 TNPLEGVDIPGFGTTKTLGLDDILERIQSAKSDSKIKGIYLNI-SGVNTGFATLQEIRDA 123 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLD 146 + K K I E Y ++ ++ I GS+ G+ ++K LD Sbjct: 124 LIDFKASKKFIVSYSEGYTQKAYYLASVADKIYLNPE---GSLDFRGLSTSIMFMKDALD 180 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKT 204 KLGV ++ VK K+ PF +Q + S Y F+ VS SR IP D Sbjct: 181 KLGVDMQVVKVGTYKSAVEPFMLNGMSQPNRLQVESYLGSLYATFLDNVSASRKIPADSL 240 Query: 205 LVLSDG-RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 ++D + +A ++ L+D V ++E+ + + +K Sbjct: 241 RSIADRYAVRDAEDAVRLKLVDAVLYKDELIDEVKKRLNIKDKKK 285 >gi|309793297|ref|ZP_07687724.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308122884|gb|EFO60146.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 501 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVSGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|295698501|ref|YP_003603156.1| probable protease SohB [Candidatus Riesia pediculicola USDA] gi|291157227|gb|ADD79672.1| probable protease SohB [Candidatus Riesia pediculicola USDA] Length = 326 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 8/209 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAG 83 S + + I +G + D++E+ E I+ D +++ L S GG+ Sbjct: 86 SKKEKRRKSCLFLIHFKGSL-DAEEVNSLREEITAILSVADKNDEVLLILESSGGTVNGY 144 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K +K + + +AAS GY+++C +N I+AA S+VGSIGV+ Q P Sbjct: 145 GLAAAQLMRLKEKKIKLTVSIDRVAASGGYMMACTANHIIAAPLSIVGSIGVVGQIPNFH 204 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL K + ++ + K + E + +++++ F V ++R P Sbjct: 205 RFLKKQDIDVELHTAGEYKRTLTLLGENTESGRKKFIQDLNNTHLLFKAFVQKNR--PNL 262 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++S+G W G +AK+ GLID +G + Sbjct: 263 NIDLVSNGEYWYGIQAKENGLIDEIGTSD 291 >gi|330444147|ref|YP_004377133.1| proteinase IV [Chlamydophila pecorum E58] gi|328807257|gb|AEB41430.1| proteinase IV [Chlamydophila pecorum E58] Length = 303 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 13/233 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 + +P + + I+ I ++ + +E D +I+ ++ PGG + Sbjct: 30 ELGKTAPIIVVLDIKDSITSAKSSAKSLEEALLALEKEPFKDRVKGVILDMNCPGGEVFE 89 Query: 83 GEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 I+ + K K+ P+ V+ + AS GY I+C ++ I + SL+GS+GVL Y Sbjct: 90 VSRIYATLNFWKQKSSLPLYVFVNGLCASGGYYIACTADKIYTSPASLIGSVGVLSGPYF 149 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN- 198 VK L++ G+ + + KA +P++ +A + Q V+D Y FV +V+ R Sbjct: 150 NVKEGLNRHGIESDVLTAGEEKAPLNPYTPWTAQARKERQGVIDFLYGQFVDVVASHRPL 209 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSL-YALGVDQSIRKI 249 + DK RI+ +A + G +DV+ ++ V Q L A G+++S R + Sbjct: 210 LTKDKLERTLGARIFPPQQALEEGFVDVINVTKQHVLQELVTACGIEESYRVV 262 >gi|117926098|ref|YP_866715.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609854|gb|ABK45309.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 433 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 15/225 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVS 72 SS + +A + I G + + E++ + D + A+++ Sbjct: 49 DHSSDLMVTPNGIAIVPIHGTLVKRVGAVEAASGLMSYASIEEKLLDAATDPAVRAILMD 108 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + IQ+ KP+ + A SA YLI+ ++ I+ +T+ VGSI Sbjct: 109 IDSPGGEVGGVFDLAAMIQEAGQGKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSI 167 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + K G S +V + K + S + ++ A +Q VD Y F + Sbjct: 168 GVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSSHAPLSDAARFNLQQEVDRLYGMFTGM 227 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R +P ++ ++ G+ A GL D VG + L Sbjct: 228 VASGRGMPEAAVRA-TEAGLFFGSNAVSSGLADQVGTIRDALAGL 271 >gi|170722382|ref|YP_001750070.1| putative periplasmic protease [Pseudomonas putida W619] gi|169760385|gb|ACA73701.1| Peptidase S49 domain protein [Pseudomonas putida W619] Length = 339 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 12/216 (5%) Query: 33 DNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V + G I+ S E+ + + D +++ L S GG ++ Sbjct: 89 EEKGRVFVLDFDGDIKASATESLRNEITALLTLATPRDE---VVLRLESGGGLVHSYGLA 145 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ + ++AAS GY+++C IV+A +++GSIGV+ Q P V L Sbjct: 146 ASQLARIRQAGIPLTVCIDKVAASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLL 205 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K + + + + K + F E K + Q+ +D ++ F V+ R P Sbjct: 206 KKHNIDFEVLTAGEYKRTLTVFGENTEKGREKFQEDLDITHQLFKDFVARYR--PQLHID 263 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G +W G A L+D + +E Sbjct: 264 EVATGEVWLGVAALNRKLVDQLQTSDEYLSERARNA 299 >gi|294783430|ref|ZP_06748754.1| protease IV [Fusobacterium sp. 1_1_41FAA] gi|294480308|gb|EFG28085.1| protease IV [Fusobacterium sp. 1_1_41FAA] Length = 578 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 14/220 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLS 74 + +E+++ V I + G I +SQ E I ++ + A+++ ++ Sbjct: 295 EATLENSNNIVYVIPLEGDIVESQTEIFSGEAAINVNETIAKLNTAKENKKIKAVVLRVN 354 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGGSA + I ++++ + KPV + +AAS GY IS +N I ++ GS+GV Sbjct: 355 SPGGSALTSDIIAEKVKELASEKPVYVSMSSIAASGGYYISANANKIYVDRNTVTGSVGV 414 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + L GV+++ + S + K + + Y F+ +VS Sbjct: 415 VSVLVDYSSLLKDNGVNVEKISEGEYSDLYSADT-FTEKKYNKIYNSNLKVYEDFLNVVS 473 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + R I +K L++GR+WTG EA K GL D +GG Sbjct: 474 KGRKIDKEKLKELAEGRVWTGTEAVKNGLADEIGGIYSTI 513 Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 8/162 (4%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASA 110 L+E I+ IS DD + +++ ++S S E + + ++ K VI + Sbjct: 84 TLLENIKNISFDDKVSGVVLKINSNSLSYAQSEELAHELSMLRGADKKVIAYFENVNRK- 142 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 Y ++ ++ I + S+ + + Y K DK GV + K+ Sbjct: 143 NYYLASYADEIYMPSANST-SVNIYPYFREEFYTKKLSDKFGVKFNIIHVGDYKSYQENL 201 Query: 168 SE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 ++ ++ +A + ++D +Y F+ +VS +R + D + Sbjct: 202 AKDSMSKEAREDSTRILDLNYENFLDIVSLNRKLNRDDLDKI 243 >gi|218699885|ref|YP_002407514.1| minor capsid protein C from bacteriophage origin [Escherichia coli IAI39] gi|218369871|emb|CAR17645.1| Minor capsid protein C from bacteriophage origin [Escherichia coli IAI39] Length = 488 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 364 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 365 ATASQADVTDVVPATEG 381 >gi|187733565|ref|YP_001879921.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|187430557|gb|ACD09831.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] Length = 501 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|218688849|ref|YP_002397061.1| head-tail preconnector protein GP5 [Escherichia coli ED1a] gi|218426413|emb|CAR07239.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli ED1a] Length = 501 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPEEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G + GL D + + + A Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMAA 291 >gi|117924626|ref|YP_865243.1| serine peptidase [Magnetococcus sp. MC-1] gi|117608382|gb|ABK43837.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 436 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 15/225 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQ-------IEDSQ------ELIERIERISRDDSATALIVS 72 SS + +A + I G IE + + E++ + D + A+++ Sbjct: 51 DHSSDLMVTPNGIAVVPIHGTLVKRAGAIEAASGLTSYASVEEKLLDAATDPAVRAILMD 110 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I + KP+ + A SA YLI+ ++ I+ +T+ VGSI Sbjct: 111 IDSPGGEVGGVFDLADMISEAGQGKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSI 169 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + K G S +V + K + S + ++ +A +Q VD Y FV Sbjct: 170 GVIAVHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEARTNLQLEVDRLYGMFVAA 229 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++ G +A +VGL D VG + L Sbjct: 230 VAAGRKMHESAVRA-TEAGLFFGDKAIRVGLADQVGTIRDALAGL 273 >gi|218704576|ref|YP_002412095.1| Head-tail preconnector protein GP5 [Escherichia coli UMN026] gi|293404456|ref|ZP_06648450.1| scaffold protein GP6 [Escherichia coli FVEC1412] gi|298380232|ref|ZP_06989837.1| scaffold protein GP6 [Escherichia coli FVEC1302] gi|300895932|ref|ZP_07114503.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|218431673|emb|CAR12555.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli UMN026] gi|291429042|gb|EFF02067.1| scaffold protein GP6 [Escherichia coli FVEC1412] gi|298279930|gb|EFI21438.1| scaffold protein GP6 [Escherichia coli FVEC1302] gi|300360143|gb|EFJ76013.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] Length = 482 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|218689829|ref|YP_002398041.1| head-tail preconnector protein GP5 [Escherichia coli ED1a] gi|218427393|emb|CAR08290.2| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli ED1a] Length = 501 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPEEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G + GL D + + + A Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMAA 291 >gi|292655044|ref|YP_003534941.1| proteinase IV-like [Haloferax volcanii DS2] gi|291370747|gb|ADE02974.1| proteinase IV-like, transmembrane [Haloferax volcanii DS2] Length = 333 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 24/260 (9%) Query: 14 MLSLVTLTVVYFSWSSHVEDN---SPHVARIAIRGQIE---------------DSQELIE 55 +L + V + + VA +A+ G I + +++E Sbjct: 42 LLLFIGTVVAALRVGGRLAASAFPDYDVAEVAVEGPISRDGGGGPVPGRGGGTPADDIVE 101 Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +++ + DDS AL+V L++PGG + I RA+ P + + AS GY I+ Sbjct: 102 QVDAAADDDSVDALLVKLNTPGGEVLPSDDIRRAVADF--DGPTVAYATDTCASGGYWIA 159 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 + + + + S+VGSIGV+ DK+G+S + + K E Sbjct: 160 SGCDELWSHDVSVVGSIGVIGSSVNASELADKVGLSYERFAAGKYKDAGMALKEPTEDER 219 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q ++D Y FV V+E R++ ++ R++ G EA ++GL+D +G +++V Sbjct: 220 EYLQGLIDDYYDDFVERVAEGRDMDPQVVRD-TEARVYLGEEAHELGLVDSLGSRDDVED 278 Query: 236 SLYA-LGVDQSIRKIKDWNP 254 L LG D+ ++++ P Sbjct: 279 RLAERLGRDE--VSVREFTP 296 >gi|323965411|gb|EGB60867.1| peptidase S49 [Escherichia coli M863] Length = 501 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D S +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTSVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G + GL D + + + A Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMAA 291 >gi|301017487|ref|ZP_07182178.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] gi|300400179|gb|EFJ83717.1| putative signal peptide peptidase SppA [Escherichia coli MS 69-1] Length = 501 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|331672143|ref|ZP_08372936.1| head-tail preconnector protein GP5 [Escherichia coli TA280] gi|331070691|gb|EGI42053.1| head-tail preconnector protein GP5 [Escherichia coli TA280] Length = 501 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPEEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|331651533|ref|ZP_08352553.1| minor capsid protein C (GPC) [Escherichia coli M718] gi|331050806|gb|EGI22863.1| minor capsid protein C (GPC) [Escherichia coli M718] Length = 484 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 364 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 365 ATASQADVTDVVPATEG 381 >gi|240850472|ref|YP_002971870.1| phage protein Gp18 [Bartonella grahamii as4aup] gi|240267595|gb|ACS51183.1| phage protein Gp18 [Bartonella grahamii as4aup] Length = 351 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 27/260 (10%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 ++A I + G + + L A+++ + S GG A Sbjct: 59 QNNIAIIPVHGTLVRRGAWLGALSGLTSYEGLGASFREAIAQPDVRAVLLDIDSGGGEAG 118 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+C+++ I A T +VGSIGV+ + Sbjct: 119 GVFDLVEEFQALSKKYDKPIWAHANEFACSAAYAIACSASQIWVARTGVVGSIGVVCAHL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G V K +P ++ A MQ Y FV LV+++R + Sbjct: 179 DQSRADEKHGHKWTFVFEGDHKVHGNPHEPLSDTAQIKMQADCALLYEMFVDLVAQNRRL 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D + + G++A +GL D G Q+L AL S +N W Sbjct: 239 NADAIRD-TKAETFIGSQAITLGLADAQGTL---AQALEALTDSISQNPTATTKEGQNTW 294 Query: 260 FCD--------LKNLSISSL 271 +K LS SS+ Sbjct: 295 HAHNTALKKMMMKKLSTSSM 314 >gi|26249012|ref|NP_755052.1| putative capsid protein of prophage [Escherichia coli CFT073] gi|26109419|gb|AAN81622.1|AE016765_24 Putative capsid protein of prophage [Escherichia coli CFT073] Length = 477 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 120 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 179 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 180 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 239 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 240 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 299 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 300 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 357 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 358 ATASQADVTDVVPATEG 374 >gi|323962536|gb|EGB58116.1| peptidase S49 [Escherichia coli H489] Length = 501 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|300937014|ref|ZP_07151882.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300457896|gb|EFK21389.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] Length = 308 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPEEIRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|254369756|ref|ZP_04985766.1| hypothetical protein FTAG_01090 [Francisella tularensis subsp. holarctica FSC022] gi|157122715|gb|EDO66844.1| hypothetical protein FTAG_01090 [Francisella tularensis subsp. holarctica FSC022] Length = 338 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 104/241 (43%), Gaps = 8/241 (3%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSA-TALIVSLSSPGGSAYAGEAIFRAIQKV 93 + I +G I+ SQ L + I + +IV + S GG ++++ Sbjct: 94 KIFVINFKGDIDASQVENLRNEVSAILAVANIEDEIIVRIDSLGGVVNGYGFAAAQLERI 153 Query: 94 KNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + + + ++AAS GY++S ++ I+AA ++VGSIGV+ P ++ L+K G+++ Sbjct: 154 RQAGINLTVCIDKVAASGGYMMSAVAHKIIAAPFAIVGSIGVVGTIPNIRELLEKNGINV 213 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S K + + + ++S + F + + R P ++ G Sbjct: 214 EMHTSGEYKRTLTTVGVNTEEGRNKFKQDLESIHQLFKKHILVYR--PSLDIDKVATGEY 271 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 W G +A ++GL+D + ++ L L ++ ++ + + ++ ++ Sbjct: 272 WFGKDALELGLVDKIQTYDDYLIDL--LKKQHNVYEVSYVIKKEKGFLRSKFSMLKRAIT 329 Query: 273 E 273 Sbjct: 330 N 330 >gi|56460146|ref|YP_155427.1| putative periplasmic protease [Idiomarina loihiensis L2TR] gi|56179156|gb|AAV81878.1| Periplasmic serine protease, ClpP family [Idiomarina loihiensis L2TR] Length = 332 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 12/213 (5%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 V++ + I +G ++ + E+ + + D ++V L S GG Sbjct: 81 VQNKEKRLFVIDFKGSMDAKEVDSLRHEVNAILNLATEKDE---VLVRLESGGGVVNGYG 137 Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + +++ V + ++AAS GY+++C + ++AA + +GSIGV+ Q P Sbjct: 138 LAAAQLLRLREHNLTVNVAIDKVAASGGYMMACVGHKLMAAPFAFIGSIGVVAQIPNFHR 197 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K V + + + K + F E + + + +++ + F V E+R Sbjct: 198 LLKKHNVDFEQLTAGEYKRTLTIFGENTDEGRRKFKQDLEAIHRQFKSFVQENR--SELD 255 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ G +W+G EAK++GLID V + Sbjct: 256 IDKVATGEVWSGQEAKELGLIDEVITSDAWLMK 288 >gi|27904758|ref|NP_777884.1| putative periplasmic protease [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396886|sp|Q89AL0|SOHB_BUCBP RecName: Full=Putative protease sohB gi|27904155|gb|AAO26989.1| putative protease SohB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 349 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 12/211 (5%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 V P + I +G I + E+ I + D +++ L S GG+ + Sbjct: 99 VVRAQPTLYVIDFKGGIAAHEVKSLREEISSIISVAQKHDE---VLLRLESSGGTIHGYG 155 Query: 85 AIFRAIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q++++RK + + ++A S GY+++C +N I+A S++GSIGV+ Q+P + Sbjct: 156 LAAVQLQRLRSRKIFLTISIDKIATSGGYMMACVANYIIATPFSIIGSIGVVAQFPNIHK 215 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 FL K + ++ + K + F E P+ + + ++ ++ F + V R P Sbjct: 216 FLKKNNIDVELHTAGVHKRTLTIFGENTPEDRKKFVEELNVAHDLFKKFVKTMR--PSLN 273 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 LS+G W G+ A K L+D + ++ Sbjct: 274 IEKLSNGECWFGSIALKKKLVDDINTSDDFI 304 >gi|218554104|ref|YP_002387017.1| Minor capsid protein C from bacteriophage origin [Escherichia coli IAI1] gi|218360872|emb|CAQ98442.2| Minor capsid protein C from bacteriophage origin [Escherichia coli IAI1] Length = 484 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 364 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 365 ATASQADVTDVVPATEG 381 >gi|331672678|ref|ZP_08373467.1| minor capsid protein C (GPC) [Escherichia coli TA280] gi|331070321|gb|EGI41687.1| minor capsid protein C (GPC) [Escherichia coli TA280] Length = 484 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 335 >gi|117924561|ref|YP_865178.1| serine peptidase [Magnetococcus sp. MC-1] gi|117608317|gb|ABK43772.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 418 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 15/225 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQ-------IEDSQ------ELIERIERISRDDSATALIVS 72 SS + +A + I G IE + + E+I + D + A+++ Sbjct: 33 DHSSDLLITPNGIAVVPIHGTLVKRAGAIEAASGLTSYASIEEKILDAATDPAVRAILMD 92 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + IQ+ KP+ + A SA YLI+ ++ I+ +T+ VGSI Sbjct: 93 VDSPGGEVGGVFDLAAMIQEAGQDKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSI 151 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + K G S +V + K + S + ++ +A +Q VD Y FV Sbjct: 152 GVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEARTNLQLEVDRLYGMFVAA 211 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++ G +A +VGL D VG + L Sbjct: 212 VAAGRKMNESAVRA-TEAGLFFGDKAIRVGLADQVGTIRDALAGL 255 >gi|315295105|gb|EFU54440.1| putative signal peptide peptidase SppA [Escherichia coli MS 153-1] Length = 501 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|331676489|ref|ZP_08377186.1| minor capsid protein C (GPC) [Escherichia coli H591] gi|331075982|gb|EGI47279.1| minor capsid protein C (GPC) [Escherichia coli H591] Length = 484 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 335 >gi|300973765|ref|ZP_07172333.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] gi|300410689|gb|EFJ94227.1| putative signal peptide peptidase SppA [Escherichia coli MS 45-1] Length = 391 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|42523650|ref|NP_969030.1| putative periplasmic protease [Bdellovibrio bacteriovorus HD100] gi|39575857|emb|CAE80023.1| SohB protein, peptidase U7 family [Bdellovibrio bacteriovorus HD100] Length = 339 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 10/220 (4%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSATALIVSLSSPGGSA 80 + S + + I G ++ S +E + I ++ ++V + SPGG Sbjct: 80 ALDSKSSNGDKKIFVIDFDGDVKASAVENLREEVTAILTLATPSD--EVVVRVESPGGVV 137 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + +++ + P+ V ++AAS GYL+S +N I+ A ++VGSIGV+ Q P Sbjct: 138 HGYGLAASQLLRIREKGIPLTVCVDKVAASGGYLMSVTANKILCAPFAIVGSIGVVAQLP 197 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L K V K + K S E+ K + + ++ ++ F VS R Sbjct: 198 NLHRLLKKHDVDYKEYTAGEFKRTVSLLGEITDKGEEKFKQQLEDTHTLFKSFVSRFR-- 255 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 P ++ G W G +A L+D + ++ +L Sbjct: 256 PQLNLAEVATGEYWYGEQALTKLLVDEIRTSDDYLLTLSE 295 >gi|218703860|ref|YP_002411379.1| Minor capsid protein C from bacteriophage origin [Escherichia coli UMN026] gi|218430957|emb|CAR11831.1| Minor capsid protein C from bacteriophage origin [Escherichia coli UMN026] Length = 481 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 120 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 179 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 180 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 239 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 240 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 299 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 300 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 328 >gi|323969481|gb|EGB64773.1| peptidase S49 [Escherichia coli TA007] Length = 501 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 91/213 (42%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D + +++ + SPGG A Sbjct: 78 IAVLPVTGMLVHRLGGMRPFSGMTGYDGIVACLQQAMADTAVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHLSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D+++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPEEVRQDMQQRIDAAHRMFAEKVAMYTGLSVD-V 256 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++ ++ G + GL D + + + Sbjct: 257 VTGTEAAVFEGQSGIEAGLADELVNASDAISVM 289 >gi|25403581|pir||A84963 probable proteinase sohB [imported] - Buchnera sp. (strain APS) gi|10038958|dbj|BAB12993.1| possible protease sohB [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|311086020|gb|ADP66102.1| putative periplasmic protease [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087177|gb|ADP67257.1| putative periplasmic protease [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087706|gb|ADP67785.1| putative periplasmic protease [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 362 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 8/201 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + +G + + E++ E IS + +++ L S GG + + +++ Sbjct: 119 FVLDFKGDVY-ANEVVGLREEISAILLVANKHDEVLLRLESSGGVIHGYGLAASQLNRLR 177 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + +I V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P L K + + Sbjct: 178 QKGIRLIVSVDKIAASGGYMMACVADYIVSAPFAIIGSIGVVGQIPNFNKLLKKCNIDFE 237 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + K + F + D +++++ F + E R P +S+G W Sbjct: 238 LHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHKLFKSFIKEMR--PSLDIEDVSNGEHW 295 Query: 214 TGAEAKKVGLIDVVGGQEEVW 234 G A + L+D +G +++ Sbjct: 296 FGTIALEKKLVDQIGTSDDIL 316 >gi|91210342|ref|YP_540328.1| bacteriophage head-tail preconnector protein gp5 [Escherichia coli UTI89] gi|117623353|ref|YP_852266.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli APEC O1] gi|218558060|ref|YP_002390973.1| head-tail preconnector protein GP5 [Escherichia coli S88] gi|549296|sp|P36273|VG05_BPP21 RecName: Full=Head-tail preconnector protein GP5; AltName: Full=Putative peptidase GP5; Contains: RecName: Full=Scaffold protein GP6; AltName: Full=Head protein GP6 gi|423861|pir||JN0539 head protein gp5 - phage 21 gi|215459|gb|AAA32343.1| head-tail preconnector gp5 [Phage 21] gi|91071916|gb|ABE06797.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli UTI89] gi|115512477|gb|ABJ00552.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli APEC O1] gi|218364829|emb|CAR02521.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli S88] gi|307627348|gb|ADN71652.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli UM146] gi|323953610|gb|EGB49475.1| peptidase S49 [Escherichia coli H252] Length = 501 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|167621040|ref|ZP_02389671.1| phage minor capsid protein C, putative [Burkholderia thailandensis Bt4] Length = 322 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 102/225 (45%), Gaps = 11/225 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 + ++ ++ + S S+H+ P + + L + + D + +++ + Sbjct: 78 MDIIPVSGILVSRSAHMNPCEP----------MTSYEGLRSAVNQAVADPAVEHIVLDID 127 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS VGSIGV Sbjct: 128 SNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASKVIVSRTSGVGSIGV 187 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + V ++ G+ + SV + K + +P ++ +++ + +V +SY FV ++ Sbjct: 188 IANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLTFLTSMVQNSYKQFVDAIA 247 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + I+ G + + GL D V + + A Sbjct: 248 NFRGLSTQAVKD-TQAGIFFGQKGVEAGLADSVETPQAAINRIAA 291 >gi|26247441|ref|NP_753481.1| putative capsid assembly protein of prophage [Escherichia coli CFT073] gi|227886459|ref|ZP_04004264.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli 83972] gi|300992399|ref|ZP_07179897.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|301046454|ref|ZP_07193609.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|26107842|gb|AAN80041.1|AE016759_315 Putative capsid assembly protein of prophage [Escherichia coli CFT073] gi|227836663|gb|EEJ47129.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli 83972] gi|300301568|gb|EFJ57953.1| putative signal peptide peptidase SppA [Escherichia coli MS 185-1] gi|300305350|gb|EFJ59870.1| putative signal peptide peptidase SppA [Escherichia coli MS 200-1] gi|307553180|gb|ADN45955.1| head-tail preconnector protein gp5 of bacteriophage [Escherichia coli ABU 83972] Length = 501 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|117925862|ref|YP_866479.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609618|gb|ABK45073.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 418 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 15/224 (6%) Query: 27 WSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSL 73 +SS + +A + I G + + E++ + D + A+++ + Sbjct: 34 YSSDLMVTPNGIAIVPIHGTLVKRVGAVEAASGLMSYASIEEKLLDAATDPAVRAILMDI 93 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG + I + KP+ + A SA YLI+ ++ I+ +T+ VGSIG Sbjct: 94 DSPGGEVGGVFDLADMISEAGQGKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSIG 152 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V+ + K G S +V + K + S + ++ +A +Q VD Y FV V Sbjct: 153 VIAVHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEARTNLQLEVDRLYGMFVAAV 212 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + R + ++ ++ G +A +VGL D VG + L Sbjct: 213 AAGRKMHESAVRA-TEAGLFFGDKAIRVGLADQVGTIRDALAGL 255 >gi|331646437|ref|ZP_08347540.1| minor capsid protein C (GPC) [Escherichia coli M605] gi|331045189|gb|EGI17316.1| minor capsid protein C (GPC) [Escherichia coli M605] Length = 484 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 335 >gi|331666075|ref|ZP_08366969.1| head-tail preconnector protein GP5 [Escherichia coli TA143] gi|331057126|gb|EGI29120.1| head-tail preconnector protein GP5 [Escherichia coli TA143] Length = 501 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVM 289 >gi|260856233|ref|YP_003230124.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|260866916|ref|YP_003233318.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] gi|257754882|dbj|BAI26384.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|257763272|dbj|BAI34767.1| putative head protein/prohead protease [Escherichia coli O111:H- str. 11128] gi|323156570|gb|EFZ42718.1| head-tail preconnector GP5 [Escherichia coli EPECa14] Length = 501 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|293403702|ref|ZP_06647790.1| head protein [Escherichia coli FVEC1412] gi|298383397|ref|ZP_06992983.1| minor capsid protein C bacteriophage origin [Escherichia coli FVEC1302] gi|291429117|gb|EFF02140.1| head protein [Escherichia coli FVEC1412] gi|298276193|gb|EFI17720.1| minor capsid protein C bacteriophage origin [Escherichia coli FVEC1302] Length = 472 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 115 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 174 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 175 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 234 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 235 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 294 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 295 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 323 >gi|117925336|ref|YP_865953.1| serine peptidase [Magnetococcus sp. MC-1] gi|117609092|gb|ABK44547.1| protein C, Serine peptidase, MEROPS family S49 [Magnetococcus sp. MC-1] Length = 433 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 15/225 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVS 72 SS + +A + I G + + E++ + D + A+++ Sbjct: 49 DHSSDLMVTPNGIAIVPIHGTLVKRVGAVEAASGLMSYASIEEKLLDAATDPAVRAILMD 108 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I + KP+ + A SA YLI+ ++ I+ +T+ VGSI Sbjct: 109 IDSPGGEVGGVFDLAAMIHEAGQGKPIWALADD-AFSAAYLIASQAHRIIVPQTAGVGSI 167 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + K G S +V + K + S + ++ +A +Q VD Y FV Sbjct: 168 GVIAAHVDESEKDAKEGRSYTTVFAGARKNDFSTHAPLSLEARTNLQLEVDRLYGMFVAA 227 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 V+ R + ++ ++ G +A +VGL D VG + L Sbjct: 228 VAAGRKMHESAVRA-TEAGLFFGDKAIRVGLADQVGTIRDALAGL 271 >gi|332141318|ref|YP_004427056.1| putative inner membrane peptidase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551340|gb|AEA98058.1| putative inner membrane peptidase [Alteromonas macleodii str. 'Deep ecotype'] Length = 340 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 8/208 (3%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIF 87 + N + + +G D+ E+ E ++ + ++V L S GG + Sbjct: 89 DANKSRLYVLDFKGS-MDANEVEHLREEVTAILCVANKEDEVLVRLESGGGVVHGYGLAA 147 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 +Q++K + + V ++AAS GY+++C ++ ++A++ + +GSIGVL Q P L Sbjct: 148 SQLQRIKEKGLKLTIAVDKVAASGGYMMACVADKLLASQFAYIGSIGVLAQLPNFNKLLK 207 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K + + + K + F E N + ++ ++ + F V R P Sbjct: 208 KNDIEFEQHTAGEFKRTLTIFGENNDEGRAKFKEEIEEIHVLFKDFVQSQR--PDMNIDK 265 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +AK +GL+D + ++ Sbjct: 266 VATGEYWPGIKAKTLGLVDEITTSDDYI 293 >gi|157157447|ref|YP_001463293.1| S49 family peptidase [Escherichia coli E24377A] gi|209919414|ref|YP_002293498.1| putative phage minor capsid protein [Escherichia coli SE11] gi|157079477|gb|ABV19185.1| peptidase, S49 (protease IV) family [Escherichia coli E24377A] gi|209912673|dbj|BAG77747.1| putative phage minor capsid protein [Escherichia coli SE11] Length = 436 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + +R+++ D +++ + SPGG Sbjct: 79 IAVLPVTGTLVHKLGYINPVSGMSGYDGIAKRLQQAISDPDVKGILLDIDSPGGEVAGAF 138 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I + + +KPV + A SA YL++ A + + +T VGSIGVL + V+ Sbjct: 139 DTADLIARAREQKPVWALASDTACSAAYLLASACSRRLITQTGTVGSIGVLMAHRCVEKA 198 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ GV + + + K + +P+S++ Q ++S+ F + VS+ + + Sbjct: 199 LEIAGVDVTLIYAGAHKVDGNPYSQLPDDVRDEFQLSINSTREQFAQKVSDYTGLKKSRV 258 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 L ++ ++ GA+A K GL D + + + ++ R Sbjct: 259 LA-TEAAVFIGADAIKSGLADQLVNYADAIAVMADALKPKTER 300 >gi|26247317|ref|NP_753357.1| putative capsid assembly protein of prophage [Escherichia coli CFT073] gi|26107718|gb|AAN79917.1|AE016759_191 Putative capsid assembly protein of prophage [Escherichia coli CFT073] Length = 501 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|92114061|ref|YP_573989.1| putative periplasmic protease [Chromohalobacter salexigens DSM 3043] gi|91797151|gb|ABE59290.1| inner membrane peptidase, Serine peptidase, MEROPS family S49 [Chromohalobacter salexigens DSM 3043] Length = 349 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 21/272 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAY 81 E P V + G ++ S +++ + + DD ++V L+S GG + Sbjct: 90 GEAQEAARPRVWVLDFDGDLKASRTPQLAEQVSLLLGELQDDDE---VVVRLTSGGGLVH 146 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A + ++++ + V ++AAS GY+++C ++ ++AA +++GSIGV+ Q P Sbjct: 147 AYGLASAQLDRLRDAGVRLTVCVDKVAASGGYMMACCAHRLIAAPFAVIGSIGVVAQVPN 206 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 V L K + ++ + + K + E + + + ++ F R V E R P Sbjct: 207 VHRLLKKHDIDVELLTAGRYKRTLTVLGENTEEGRAKFLEDLRETHDLFKRYVGERR--P 264 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 ++ G IW G +A GLID V + + R ++ P++ Sbjct: 265 ALDIEKVATGEIWYGRQALDDGLIDEVNTSDGYLAARMEQA-----RVLQVVLEPRHSLM 319 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + + + + +M++ + G W Sbjct: 320 QRIGVGASQGIERLSDRVMERLEESG----WQ 347 >gi|257471337|ref|ZP_05635336.1| putative periplasmic protease [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] Length = 362 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 8/234 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + +G + + E++ E IS + +++ L S GG + + +++ Sbjct: 119 FVLDFKGDVY-ANEVVGLREEISAILLVANKHDEVLLRLESSGGVIHGYGLAASQLNRLR 177 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + +I V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P L K + ++ Sbjct: 178 QKGIRLIVSVDKIAASGGYMMACVADYIVSAPFAIIGSIGVVGQIPNFNKLLKKCNIDLE 237 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + K + F + D +++++ F + E R P +S+G W Sbjct: 238 LHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHKLFKSFIKEMR--PSLDIEDVSNGEHW 295 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 G A + L+D +G +++ S I+ I + + NLS Sbjct: 296 FGTIALEKKLVDQIGTSDDILISKMEEYTLLRIQYIYRKKILERFTASVTHNLS 349 >gi|148652799|ref|YP_001279892.1| putative periplasmic protease [Psychrobacter sp. PRwf-1] gi|148571883|gb|ABQ93942.1| peptidase S49 [Psychrobacter sp. PRwf-1] Length = 332 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 10/212 (4%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAG 83 S + V + G I+ S ++ + IS + +++ L S GG ++ Sbjct: 57 SKAKAKQKRVFVLDFDGDIKASA--VKHLREEISTIISGANKGDEVVIRLESGGGMVHSY 114 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K+ + V ++AAS GY+++C ++ I+AA +++GSIGV+ Q P Sbjct: 115 GLAAAQLVRLKDAGLTLTIAVDKIAASGGYMMACVADKILAAPFAVIGSIGVVSQMPNFN 174 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +L K + + + K + F E + + ++ ++ F V+ R P Sbjct: 175 KWLKKHDIDYEMFTAGEYKRTVTVFGENDDDDRAKYTEELEQTHQLFKHFVTTYR--PQL 232 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +++G W G +A + L+D + + Sbjct: 233 DLTKVANGDHWYGEDALHLNLVDELTTSDAYL 264 >gi|88811913|ref|ZP_01127166.1| Peptidase S49 [Nitrococcus mobilis Nb-231] gi|88790797|gb|EAR21911.1| Peptidase S49 [Nitrococcus mobilis Nb-231] Length = 329 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 93/219 (42%), Gaps = 12/219 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +S + P + + +G + S +E+ + D +++ L S GG + Sbjct: 83 NSKDTSDRPRLFILDFQGDLRASATESLREEISAILTAARPQDR---VLLRLESAGGLVH 139 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + +++ R + + +AAS GYL++ ++ +VAA ++VGSIGV+ Q P Sbjct: 140 NYGLAASQLIRLRKRGIHLTISIDRVAASGGYLMASVADCLVAAPFAIVGSIGVIAQVPN 199 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K V + + K + F E A ++ + + F ++ R P Sbjct: 200 FHRVLKKHEVDFELHTAGEFKRTLTLFGENTDAARAKFREELAEIHQSFKEHIARYR--P 257 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ G W G A ++GL+D +G ++ S Sbjct: 258 NVEINRIATGEYWLGERACELGLVDELGTSDDFILSRLE 296 >gi|149194025|ref|ZP_01871123.1| proteinase IV [Caminibacter mediatlanticus TB-2] gi|149135978|gb|EDM24456.1| proteinase IV [Caminibacter mediatlanticus TB-2] Length = 300 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 137/288 (47%), Gaps = 16/288 (5%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSW----------SSHVEDNSPHVARIAIRGQI--EDS 50 F +K +K + V+ ++ L + + +++ + P+VA I I I + Sbjct: 14 FKIKALKEKVVLFGVIILIIAEIIFLGSLLKKTLFPTNINLHKPYVAVININKTITVDYI 73 Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ ++++ + +D + ++ ++PGGS A + ++ V +K V V MAAS Sbjct: 74 DKITKKMDALLKDKNCKEFLLVFNTPGGSPSASDEFNAYLKYVNKKKRVNVYVESMAASG 133 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 GY I A IVA + ++VGSIGV+ + +K DK+G+ S+ K S F + Sbjct: 134 GYYIISAIKPIVANKNAVVGSIGVIMPHFVLKKLADKIGIEEDSLTIGKYKEPVSLFRKF 193 Query: 171 NPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + K + ++ ++ +Y F++ V++ RNI DK +DG+I+ + K + L+D + Sbjct: 194 SDKDKEYLKTHLLLPTYENFLKTVAKDRNISVDKLKQYADGKIYVASIVKGI-LVDKIST 252 Query: 230 QEEVWQSLYA-LGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 +V + + LG + I K +F + I L++ + Sbjct: 253 LIDVKEEIKKRLGKNIKFYNIS-LEKQKVPFFNIKLSSDIGEFLKEIV 299 >gi|218694224|ref|YP_002401891.1| Minor capsid protein C from bacteriophage origin [Escherichia coli 55989] gi|218350956|emb|CAU96660.1| Minor capsid protein C from bacteriophage origin [Escherichia coli 55989] Length = 484 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 127 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPIVDGILLDMDTPGGMVAGAF 186 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 187 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 246 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 247 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 306 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 307 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 335 >gi|323963682|gb|EGB59198.1| peptidase S49 [Escherichia coli M863] Length = 439 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|28952049|ref|NP_240107.2| putative periplasmic protease [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682205|ref|YP_002468589.1| possible protease SohB [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11387171|sp|P57370|SOHB_BUCAI RecName: Full=Probable protease sohB gi|219621938|gb|ACL30094.1| possible protease SohB [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086594|gb|ADP66675.1| putative periplasmic protease [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 336 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 8/201 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + +G + + E++ E IS + +++ L S GG + + +++ Sbjct: 93 FVLDFKGDVY-ANEVVGLREEISAILLVANKHDEVLLRLESSGGVIHGYGLAASQLNRLR 151 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + +I V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P L K + + Sbjct: 152 QKGIRLIVSVDKIAASGGYMMACVADYIVSAPFAIIGSIGVVGQIPNFNKLLKKCNIDFE 211 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + K + F + D +++++ F + E R P +S+G W Sbjct: 212 LHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHKLFKSFIKEMR--PSLDIEDVSNGEHW 269 Query: 214 TGAEAKKVGLIDVVGGQEEVW 234 G A + L+D +G +++ Sbjct: 270 FGTIALEKKLVDQIGTSDDIL 290 >gi|315285962|gb|EFU45400.1| putative signal peptide peptidase SppA [Escherichia coli MS 110-3] Length = 494 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|188491998|ref|ZP_02999268.1| head-tail preconnector gp5 [Escherichia coli 53638] gi|188495988|ref|ZP_03003258.1| head-tail preconnector gp5 [Escherichia coli 53638] gi|188487197|gb|EDU62300.1| head-tail preconnector gp5 [Escherichia coli 53638] gi|188491187|gb|EDU66290.1| head-tail preconnector gp5 [Escherichia coli 53638] Length = 501 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYADH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGSHKVDGNHFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLTVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + ++ ++ G + GL D + + + Sbjct: 258 MG-TEAAVFEGQTGIEAGLADELINASDAISVMA 290 >gi|117623499|ref|YP_852412.1| putative capsid assembly protein of prophage [Escherichia coli APEC O1] gi|218558219|ref|YP_002391132.1| head-tail preconnector protein GP5 [Escherichia coli S88] gi|115512623|gb|ABJ00698.1| putative capsid assembly protein of prophage [Escherichia coli APEC O1] gi|218364988|emb|CAR02692.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli S88] gi|323949753|gb|EGB45638.1| peptidase S49 [Escherichia coli H252] Length = 501 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|255348869|ref|ZP_05380876.1| exported protease IV [Chlamydia trachomatis 70] gi|255503409|ref|ZP_05381799.1| exported protease IV [Chlamydia trachomatis 70s] gi|255507087|ref|ZP_05382726.1| exported protease IV [Chlamydia trachomatis D(s)2923] gi|289525538|emb|CBJ15016.1| exported protease IV [Chlamydia trachomatis Sweden2] gi|296435097|gb|ADH17275.1| exported protease IV [Chlamydia trachomatis E/150] gi|296438818|gb|ADH20971.1| exported protease IV [Chlamydia trachomatis E/11023] Length = 331 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 + +P +A I I I S +R++ + ++V + PGG + Sbjct: 57 ELGKTAPIIAVIDINDAIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFE 116 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 + + + K + PV V + AS GY ++C ++ I +SL+GSIGV Y Sbjct: 117 IDRMCATLSFWKKQWGIPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVRSGPYF 176 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +PFS + Q +VD+ Y FV V + R Sbjct: 177 NVKEGLQRHGVETAILTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSK 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 + +K + R++ +A + GL+D + QE+ + L A G+ + R I Sbjct: 237 LSKEKLTKVLGARVFIAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|240849986|ref|YP_002971378.1| phage protein Gp18 [Bartonella grahamii as4aup] gi|240267109|gb|ACS50697.1| phage protein Gp18 [Bartonella grahamii as4aup] Length = 354 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 27/260 (10%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 ++A I + G + + L A+++ + S GG A Sbjct: 59 QNNIAIIPVHGTLVRRGAWLGALSGLTSYEGLGASFREAIAQPDVRAVLLDIDSGGGEAG 118 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+C+++ I A T +VGSIGV+ + Sbjct: 119 GVFDLVEEFQALSKKYDKPIWAHANEFACSAAYAIACSASQIWVARTGVVGSIGVVCAHL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G V K +P ++ A MQ Y FV LV+++R + Sbjct: 179 DQSRADEKHGHKWTFVFEGDHKVHGNPHEPLSDTAQIKMQADCALLYEMFVDLVAQNRRL 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + + G +A +GL D G Q+L AL S +N W Sbjct: 239 NAAAIRD-TKAETFIGNQAITLGLADAQGTL---AQALEALTDSISQNPTSTEKEGQNTW 294 Query: 260 FCD--------LKNLSISSL 271 +K LS SS+ Sbjct: 295 HAHNTALKKMMMKRLSTSSM 314 >gi|239993633|ref|ZP_04714157.1| putative periplasmic protease [Alteromonas macleodii ATCC 27126] Length = 348 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 8/205 (3%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAI 90 + I +G D+ E+ E I+ + ++V L S GG + + Sbjct: 100 KSRLYVIDFKGS-MDANEVEHLREEITAILCVANKEDEVLVRLESGGGVVHGYGLAASQL 158 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 Q++K + + V ++AAS GY+++C ++ ++A++ + +GSIGVL Q P L K Sbjct: 159 QRIKEKGLKLTIAVDKVAASGGYMMACVADKLLASQFAYIGSIGVLAQLPNFNKLLKKND 218 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + K + F E N + ++ ++ + F V R P ++ Sbjct: 219 IEFEQHTAGEFKRTLTVFGENNDEGRAKFKEEIEEIHILFKDFVQSQR--PDMDIDKVAT 276 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVW 234 G W G +AK +GLID + ++ Sbjct: 277 GEYWPGIKAKSLGLIDDITTSDDYI 301 >gi|323186697|gb|EFZ72020.1| head-tail preconnector protein GP5 [Escherichia coli RN587/1] Length = 501 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQVAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELVNASDAISVMA 290 >gi|306813973|ref|ZP_07448146.1| Minor capsid protein C from bacteriophage origin [Escherichia coli NC101] gi|222032926|emb|CAP75666.1| capsid protein of prophage [Escherichia coli LF82] gi|305852610|gb|EFM53058.1| Minor capsid protein C from bacteriophage origin [Escherichia coli NC101] gi|312945741|gb|ADR26568.1| Minor capsid protein C from bacteriophage origin [Escherichia coli O83:H1 str. NRG 857C] Length = 443 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAV 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSSDAI 290 >gi|156358147|ref|XP_001624386.1| predicted protein [Nematostella vectensis] gi|156211161|gb|EDO32286.1| predicted protein [Nematostella vectensis] Length = 445 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%) Query: 40 RIAIRGQIEDS---------QELIERIERISRDDSA--TALIVSLSSPGGSAYAGEAIFR 88 I ++G I S + + + I+R A+ + ++S GGS I+ Sbjct: 183 IIRLQGIINASSSNHRALSLRRVEKAIDRAFEVKKVAPKAVCLEINSTGGSPVQSNLIYT 242 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I++ N K PV++ V + A S GY +S A + I S VGSIG + V + Sbjct: 243 RIREQANDKKIPVLSFVEDHALSGGYWLSLAGDEIFVDPNSAVGSIGAVSSNVGVVEAMK 302 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ + V K +P + P+ V+ ++ ++ ++ F+ LV E R + Sbjct: 303 KLGLEYRPVVMGEHKVRMNPMEPLKPEDVEWVKKILAEVHNNFIDLVKERRTKLDTTSKT 362 Query: 207 LSDGRIWTGAEAKKVGLIDVVGG 229 + G I+ G EA ++GL+D + Sbjct: 363 VFSGDIFLGKEAVRIGLVDAITT 385 >gi|166154708|ref|YP_001654826.1| exported protease IV [Chlamydia trachomatis 434/Bu] gi|166155583|ref|YP_001653838.1| exported protease IV [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335981|ref|ZP_07224225.1| exported protease IV [Chlamydia trachomatis L2tet1] gi|165930696|emb|CAP04193.1| exported protease IV [Chlamydia trachomatis 434/Bu] gi|165931571|emb|CAP07147.1| exported protease IV [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 331 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 + +P +A I I I S +R++ + ++V + PGG + Sbjct: 57 ELGKTAPIIAVIDINDAIIASSGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFE 116 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 + + + K + PV V + AS GY ++C ++ I +SL+GSIGV Y Sbjct: 117 IDRMCATLSFWKKQWGIPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVRSGPYF 176 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +PFS + Q +VD+ Y FV V + R Sbjct: 177 NVKEGLQRHGVETAILTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSK 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 + +K + R++ +A + GL+D + QE+ + L A G+ + R I Sbjct: 237 LSKEKLTKVLGARVFIAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|146329631|ref|YP_001208985.1| putative periplasmic protease [Dichelobacter nodosus VCS1703A] gi|146233101|gb|ABQ14079.1| S49 family peptidase [Dichelobacter nodosus VCS1703A] Length = 333 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 6/207 (2%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFR 88 D P + I G +E S ++L ++I I + + +++ L S GG YA Sbjct: 86 SDERPRLFVIDFDGDVEASAVEDLRDQISAILQVAEEEDEVLLRLESAGGYVYAYGLAAS 145 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++++ ++ V ++AAS GY+++C ++ ++AA +LVGSIGV+ + P L K Sbjct: 146 QLVRLRDKAVRLVIAVDKVAASGGYMMACVADELLAAPFALVGSIGVIGELPNFHDLLRK 205 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + K + F + + + + ++ F + R P + Sbjct: 206 NDIHYEQHTAGQYKRTLTVFGQNTEDDRKQFRHELAETHALFKAHIQAMR--PNLAVEEV 263 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + G W G++A GLID V ++ Sbjct: 264 ATGETWYGSQALAKGLIDRVQTSDDYV 290 >gi|327253537|gb|EGE65170.1| minor capsid protein C domain protein [Escherichia coli STEC_7v] Length = 315 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|281178282|dbj|BAI54612.1| putative phage capsid assembly protein [Escherichia coli SE15] Length = 501 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|88800083|ref|ZP_01115653.1| probable protease [Reinekea sp. MED297] gi|88777209|gb|EAR08414.1| probable protease [Reinekea sp. MED297] Length = 334 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQELIERIER-----ISRDDSATALIVSLSSPGGSAYAG 83 VE + P + +G I+ SQ +E + + ++ +I+++ SPGGS Sbjct: 82 DKVESDRPKAYALKFKGDIQASQ--VEALRQEVTAILTTAKEGEEVIITIESPGGSVSGY 139 Query: 84 EAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++K++ + V ++AAS GY+++C ++ I+AA S+VGSIGVL Q P + Sbjct: 140 GLAASQLLRLKDKGLKLTACVDQVAASGGYMMACVADRILAAPFSIVGSIGVLSQVPNIH 199 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + V + + + KA + E + Q D +++ + F LV R Sbjct: 200 RFLKRFDVDVDVLTAGKHKAPITFMGENTEEGKQKHVDDLNAIHQRFKALVKLHR--EEL 257 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 +S+G W +A + L+D + + SL +R W P K+ Sbjct: 258 NIDDVSEGDFWLAEDALQRKLVDELMTSDSYLMSLCESTDVYRVR----WQPHKS 308 >gi|309701424|emb|CBJ00728.1| Minor capsid protein [Escherichia coli ETEC H10407] Length = 439 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARMRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQTDVTDVVPATEG 336 >gi|193070040|ref|ZP_03050987.1| head-tail preconnector protein GP5 [Escherichia coli E110019] gi|192956637|gb|EDV87093.1| head-tail preconnector protein GP5 [Escherichia coli E110019] Length = 501 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELVNASDAISVMA 290 >gi|324017645|gb|EGB86864.1| putative signal peptide peptidase SppA [Escherichia coli MS 117-3] Length = 426 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVNRTRALQPHSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|323977132|gb|EGB72219.1| peptidase S49 [Escherichia coli TW10509] Length = 501 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|291285789|ref|YP_003502607.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] gi|290765662|gb|ADD59623.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] Length = 501 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVSCLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|187733678|ref|YP_001879583.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|187430670|gb|ACD09944.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] Length = 501 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVTCLQQAMADSQVRGILLDIDSPGGQAAGVF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TSL+GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSLIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|255021016|ref|ZP_05293069.1| Peptidase S49-like protein [Acidithiobacillus caldus ATCC 51756] gi|254969430|gb|EET26939.1| Peptidase S49-like protein [Acidithiobacillus caldus ATCC 51756] Length = 331 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 35 SPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + +G + S +E+ + D +++ L S GG A Sbjct: 86 GDCTFVLDFKGDLRASAVASLREEVSAILAAARPGDR---VLLRLESGGGMVNAYGLAAA 142 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + +++ + + V ++AAS GYL++ ++ IVA+ +LVGSIGV+ Q P +L + Sbjct: 143 QLLRLRAAQLHLTVLVDQVAASGGYLMAVTAHEIVASPFALVGSIGVVAQIPNFNRWLRE 202 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + + + K + F E Q +++ ++ + F V+E R P + Sbjct: 203 RHIDFEQFTAGKYKRTVTLFGENTDAGRQKLREELEDIHAMFRHFVAEYR--PSLDLEQV 260 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + G W G A+++GL+D + + V Q G ++R Sbjct: 261 ATGEAWLGIRAQELGLVDRLATSDTVIQEAADRGRVLAVR 300 >gi|241668941|ref|ZP_04756519.1| putative periplasmic protease [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877473|ref|ZP_05250183.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843494|gb|EET21908.1| peptidase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 338 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 114/296 (38%), Gaps = 71/296 (23%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA--------------------- 39 ++FV + T V++++V + +FS + + +A Sbjct: 7 IDFVFFALSTALVVIAIVFVVGSFFSLLAKAKQEVTKLAAGKLEINKIGDEYKSTKEQIL 66 Query: 40 ------------------------------RIAIRGQIEDSQELIERIERISRDDSATAL 69 I +G I SQ +E + + TA+ Sbjct: 67 ETLLDKKEYKKFVKEQKKIDKQEKPRQRKFIINFKGDIHASQ--VEDLR-----NEVTAI 119 Query: 70 IV----------SLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 + + SPGG +++++ + + ++AAS GY++S + Sbjct: 120 LAVAVADDEVVVRIDSPGGVVNGYGFAAAQLERIRQAGITLTVCIDQVAASGGYMMSAVA 179 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I+AA ++VGSIGV+ P ++ L+K G++++ S K + E + + Sbjct: 180 NKIIAAPFAIVGSIGVVGTVPNIRELLEKNGINVEMHTSGEFKRTLTTVGENTEEGRKKF 239 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + +++ + F + + R P ++ G W G +A ++GL+D + ++ Sbjct: 240 KQDLENIHELFKKHILAYR--PNLDMHKVATGEYWFGKDALELGLVDEIRTYDDYL 293 >gi|218557481|ref|YP_002390394.1| head-tail preconnector protein GP5 [Escherichia coli S88] gi|300825250|ref|ZP_07105336.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|218364250|emb|CAR01919.1| Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Escherichia coli S88] gi|300522269|gb|EFK43338.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] Length = 501 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|312969556|ref|ZP_07783739.1| minor capsid C [Escherichia coli 1827-70] gi|310337841|gb|EFQ02930.1| minor capsid C [Escherichia coli 1827-70] Length = 439 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQTDVTDVVPATEG 336 >gi|324009542|gb|EGB78761.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2] Length = 430 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAV 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSSDAI 277 >gi|193067665|ref|ZP_03048632.1| minor capsid protein C [Escherichia coli E110019] gi|192959077|gb|EDV89513.1| minor capsid protein C [Escherichia coli E110019] Length = 439 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|325497825|gb|EGC95684.1| capsid protein [Escherichia fergusonii ECD227] Length = 439 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 L ++ +++G EA GL D + + + + R Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMREALDARKSR 303 >gi|323186751|gb|EFZ72073.1| head-tail preconnector protein GP5 [Escherichia coli RN587/1] Length = 501 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELVNASDAISVMA 290 >gi|307609646|emb|CBW99151.1| hypothetical protein LPW_09361 [Legionella pneumophila 130b] Length = 197 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 3/168 (1%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG+ +Q+++++K P+ + +MAAS GYL++C +N I+AA +++GS Sbjct: 1 MESPGGAVNGYGLAASQLQRIRDKKIPLTVSIDKMAASGGYLMACVANKIIAAPFAIIGS 60 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ Q P +L K + ++ + + K + F+E K + Q+ ++ + F Sbjct: 61 IGVVAQIPNFHRWLKKNNIDVELLTAGEYKRTLTLFAENTEKGRKKFQEDLEKIHTAFRE 120 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V ++R ++ G W +A + L+D + +E A Sbjct: 121 YVLKNR--SQLDIDKVATGEHWIAKDAFDLRLVDKLATSDEYLIEKMA 166 >gi|320194291|gb|EFW68922.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327] Length = 501 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELVNASDAISVMA 290 >gi|17975166|ref|NP_536361.1| putative capsid assembly protein/protease [Burkholderia phage phiE125] gi|17484027|gb|AAL40278.1|AF447491_5 gp5 [Burkholderia phage phiE125] Length = 301 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 102/225 (45%), Gaps = 11/225 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 + ++ ++ + S S+H+ P + + L + + D + +++ + Sbjct: 57 MDIIPVSGILVSRSAHMNPCEP----------MTSYEGLRSAVNQAVADPAVEHIVLDID 106 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS VGSIGV Sbjct: 107 SNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASKVIVSRTSGVGSIGV 166 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + V ++ G+ + SV + K + +P ++ +++ + +V +SY FV ++ Sbjct: 167 IANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLTFLTSMVQNSYKQFVDAIA 226 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + I+ G + + GL D V + + A Sbjct: 227 NFRGLSTQAVKD-TQAGIFFGQKGVEAGLADSVETPQAAINRIAA 270 >gi|307310890|ref|ZP_07590536.1| peptidase S49 [Escherichia coli W] gi|306909068|gb|EFN39564.1| peptidase S49 [Escherichia coli W] gi|315060844|gb|ADT75171.1| peptidase S49 [Escherichia coli W] gi|323378587|gb|ADX50855.1| peptidase S49 [Escherichia coli KO11] Length = 439 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|294490182|gb|ADE88938.1| minor capsid protein C (GPC) [Escherichia coli IHE3034] Length = 439 Score = 184 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|149913315|ref|ZP_01901848.1| Peptidase U7 [Roseobacter sp. AzwK-3b] gi|149812435|gb|EDM72264.1| Peptidase U7 [Roseobacter sp. AzwK-3b] Length = 474 Score = 184 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 14/204 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + +IE +RD S A+ + + S GG Sbjct: 82 IAVIEISGVLIHRGGWIGQSSGQTSYEGIAAQIEAAARDPSVRAVALEIDSFGGEVAGVF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++ ++ KPV V E A SAGY ++ ++ I+ T VGSIGV+ + + Sbjct: 142 DLADRLRALRRNKPVWAFVAEHAFSAGYALASQADRILLPRTGAVGSIGVVVMHADLSSQ 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ GV + + S K + +P+ + +Q +D F V+ R+ ++ Sbjct: 202 LDQNGVRVTLIHSGQHKVDGNPYEPLPESVRDDIQREIDVLRFLFAETVAAGRSGRLNQD 261 Query: 205 LVLSD-GRIWTGAEAKKVGLIDVV 227 L+ + GA+A GL D V Sbjct: 262 AALATEAATFRGADAVSAGLADEV 285 >gi|293413827|ref|ZP_06656476.1| capsid protein [Escherichia coli B185] gi|291433885|gb|EFF06858.1| capsid protein [Escherichia coli B185] Length = 439 Score = 184 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|320194281|gb|EFW68913.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327] Length = 439 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|170769088|ref|ZP_02903541.1| minor capsid protein C (GPC) [Escherichia albertii TW07627] gi|170122160|gb|EDS91091.1| minor capsid protein C (GPC) [Escherichia albertii TW07627] Length = 439 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|15801775|ref|NP_287793.1| putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 EDL933] gi|15830362|ref|NP_309135.1| head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|15831986|ref|NP_310759.1| head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|168751220|ref|ZP_02776242.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4113] gi|168754268|ref|ZP_02779275.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|168757627|ref|ZP_02782634.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|168763183|ref|ZP_02788190.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|168763888|ref|ZP_02788895.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|168767447|ref|ZP_02792454.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|168770248|ref|ZP_02795255.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|168777049|ref|ZP_02802056.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|168777492|ref|ZP_02802499.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|168778046|ref|ZP_02803053.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|168780966|ref|ZP_02805973.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|168783394|ref|ZP_02808401.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|168784264|ref|ZP_02809271.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|168787454|ref|ZP_02812461.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|168789357|ref|ZP_02814364.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|168801276|ref|ZP_02826283.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|168802152|ref|ZP_02827159.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|195935207|ref|ZP_03080589.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. EC4024] gi|195939765|ref|ZP_03085147.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. EC4024] gi|208806693|ref|ZP_03249030.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208810278|ref|ZP_03252154.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208811228|ref|ZP_03253038.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208815162|ref|ZP_03256341.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208817055|ref|ZP_03258175.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208820900|ref|ZP_03261220.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|208822761|ref|ZP_03263080.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|209395709|ref|YP_002271108.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|209398436|ref|YP_002269682.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|217325919|ref|ZP_03442003.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|217329576|ref|ZP_03445655.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|254792211|ref|YP_003077048.1| capsid assembly protein [Escherichia coli O157:H7 str. TW14359] gi|254793644|ref|YP_003078481.1| putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 str. TW14359] gi|261225748|ref|ZP_05940029.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O157:H7 str. FRIK2000] gi|261257965|ref|ZP_05950498.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O157:H7 str. FRIK966] gi|12515353|gb|AAG56407.1|AE005368_13 putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 str. EDL933] gi|13360568|dbj|BAB34531.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|13362200|dbj|BAB36155.1| putative head-tail preconnector protein [Escherichia coli O157:H7 str. Sakai] gi|187766864|gb|EDU30708.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|187767278|gb|EDU31122.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|187767637|gb|EDU31481.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4196] gi|188014675|gb|EDU52797.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4113] gi|188998532|gb|EDU67522.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|188999298|gb|EDU68284.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|189001214|gb|EDU70200.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4076] gi|189355418|gb|EDU73837.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|189358337|gb|EDU76756.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4401] gi|189360828|gb|EDU79247.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|189363243|gb|EDU81662.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4486] gi|189366001|gb|EDU84417.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|189366559|gb|EDU84975.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4501] gi|189371025|gb|EDU89441.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|189372590|gb|EDU91006.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC869] gi|189375824|gb|EDU94240.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|189376524|gb|EDU94940.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC508] gi|208724335|gb|EDZ74044.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208724794|gb|EDZ74501.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208726494|gb|EDZ76095.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4206] gi|208731398|gb|EDZ80087.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208731810|gb|EDZ80498.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4045] gi|208738246|gb|EDZ85929.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|208741023|gb|EDZ88705.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4042] gi|209157109|gb|ACI34542.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|209159836|gb|ACI37269.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC4115] gi|217317344|gb|EEC25773.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|217322140|gb|EEC30564.1| head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. TW14588] gi|254591611|gb|ACT70972.1| capsid assembly protein [Escherichia coli O157:H7 str. TW14359] gi|254593044|gb|ACT72405.1| putative capsid assembly protein of prophage CP-933R [Escherichia coli O157:H7 str. TW14359] gi|320192550|gb|EFW67192.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC1212] gi|326342702|gb|EGD66473.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1125] gi|326347754|gb|EGD71470.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1044] Length = 501 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQNMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|323168446|gb|EFZ54126.1| minor capsid C protein [Shigella sonnei 53G] Length = 439 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|301307482|ref|ZP_07213470.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] gi|300837352|gb|EFK65112.1| putative signal peptide peptidase SppA [Escherichia coli MS 124-1] Length = 445 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 88 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 147 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 148 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 207 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 208 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 267 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 268 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 325 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 326 ATASQADVTDVVPATEG 342 >gi|15801571|ref|NP_287588.1| putative head-tail preconnector protein of prophage CP-933O [Escherichia coli O157:H7 EDL933] gi|12515088|gb|AAG56200.1|AE005349_4 putative head-tail preconnector protein of prophage CP-933O [Escherichia coli O157:H7 str. EDL933] Length = 501 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQNMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|215485837|ref|YP_002328268.1| predicted head protein/prohead protease [Escherichia coli O127:H6 str. E2348/69] gi|215263909|emb|CAS08247.1| predicted head protein/prohead protease [Escherichia coli O127:H6 str. E2348/69] Length = 501 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|87242919|gb|ABD33956.1| protease IV [uncultured bacterium] Length = 172 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 6/170 (3%) Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPF 144 ++R + ++K +KP I + + AAS GY ISCA+N I A T+L GSIG+ Y K F Sbjct: 1 MWREVVRLKEKKPAIVSMGDYAASGGYYISCAANRIFADPTTLTGSIGIFGMMYSGEKLF 60 Query: 145 LDKLGVSIKSVKSSPMKAEPS-----PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + LG++ VK++ M + +N ++MQ+ V+ Y FV +E R + Sbjct: 61 TETLGLNFDVVKTNKMADLGASLGPVLTRPLNASEQELMQNYVNRGYKLFVNRCAEGRKM 120 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + +++GR+WTGA AK +GL+D +GG ++ + ++ I Sbjct: 121 STEAIEKVAEGRVWTGAMAKDLGLVDQLGGIDKALNAAATQAGIENYSII 170 >gi|193063327|ref|ZP_03044417.1| minor capsid protein C [Escherichia coli E22] gi|192930911|gb|EDV83515.1| minor capsid protein C [Escherichia coli E22] Length = 439 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|332343254|gb|AEE56588.1| minor capsid protein [Escherichia coli UMNK88] Length = 439 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSTYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|15835395|ref|NP_297154.1| protease IV, putative [Chlamydia muridarum Nigg] gi|270285572|ref|ZP_06194966.1| protease IV, putative [Chlamydia muridarum Nigg] gi|270289583|ref|ZP_06195885.1| protease IV, putative [Chlamydia muridarum Weiss] gi|301336969|ref|ZP_07225171.1| protease IV, putative [Chlamydia muridarum MopnTet14] gi|7190808|gb|AAF39584.1| protease IV, putative [Chlamydia muridarum Nigg] Length = 332 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 22/268 (8%) Query: 4 VLKKIKTRYVMLSLV------TLTVVYFSWSSHVED---NSPHVARIAIRGQIEDS---- 50 VL + +++LSL L V + V++ SP +A I I I + Sbjct: 22 VLGAMSFIFILLSLCVMGKDSALFVSLPNAQGVVQELGKTSPILAIIEINDAIMANSGSA 81 Query: 51 ---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHE 105 Q ++ + L++ + PGG + + + A+ K + PV V Sbjct: 82 KRLQSTLQSLSEAPYKGRVKGLLIKMDCPGGEIFEIDRMSAALSFWKQKLGIPVHVFVSG 141 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKAEP 164 + AS GY ++C ++ I TSL+GSIGV Y +K L +LGV + + KA Sbjct: 142 LCASGGYYVACIADRIGTTSTSLIGSIGVRSGPYFNIKEGLQRLGVETAILTAGDDKAPL 201 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKVGL 223 +PFS + Q +VD+ Y FV V + R+ + + + R++ +A + GL Sbjct: 202 NPFSPWTEEEYAERQGIVDALYEQFVDHVVKHRSQLSKEHVTQVLGARVFIAKQALEEGL 261 Query: 224 IDVVG-GQEEVWQSLYAL-GVDQSIRKI 249 +D+V QE+ L + GV + R I Sbjct: 262 VDIVNQTQEQALDDLAGVCGVKEDYRVI 289 >gi|218553334|ref|YP_002386247.1| Minor capsid protein [Escherichia coli IAI1] gi|218360102|emb|CAQ97650.1| Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin [Escherichia coli IAI1] gi|323169838|gb|EFZ55494.1| minor capsid protein C [Escherichia coli LT-68] Length = 439 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|191166606|ref|ZP_03028435.1| minor capsid protein C [Escherichia coli B7A] gi|194427933|ref|ZP_03060478.1| minor capsid protein C [Escherichia coli B171] gi|260842764|ref|YP_003220542.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|190903411|gb|EDV63131.1| minor capsid protein C [Escherichia coli B7A] gi|194413908|gb|EDX30185.1| minor capsid protein C [Escherichia coli B171] gi|257757911|dbj|BAI29408.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] Length = 439 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|324114286|gb|EGC08257.1| peptidase S49 [Escherichia fergusonii B253] Length = 439 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 14/223 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGVF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 L ++ +++G EA GL D + + + + R Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMREALDARKSR 303 >gi|284921116|emb|CBG34182.1| phage head-tail preconnector protein [contains: scaffold protein] [Escherichia coli 042] Length = 501 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|167574265|ref|ZP_02367139.1| phage minor capsid protein C, putative [Burkholderia oklahomensis C6786] Length = 322 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 11/225 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 + ++ + + S S+H+ P + + L + + D + +++ + Sbjct: 78 MDIIPVLGILVSRSAHMNPCEP----------MTSYEGLRTSVNQAVADPAVEHIVLDID 127 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 S GGSA + I+ KP+ V+ A S GYLI+ A++ ++ + TS +GSIGV Sbjct: 128 SNGGSATGAFELADDIRAASLVKPITAIVNFSAFSGGYLIAAAASNVIVSRTSGIGSIGV 187 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + V ++ G+ + SV + K + +P ++ +++ + +V +SY FV ++ Sbjct: 188 IANHLDVSKRDEQQGIKVTSVFAGDHKNDLTPHEPLSDQSLTFLTSMVQNSYKQFVDAIA 247 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R + + I+ G + GL D V + + A Sbjct: 248 NFRGLSTQAVKD-TQAGIFFGQKGVDAGLADSVETPQAAINRIAA 291 >gi|193066616|ref|ZP_03047653.1| head-tail preconnector protein GP5 [Escherichia coli E22] gi|192925744|gb|EDV80401.1| head-tail preconnector protein GP5 [Escherichia coli E22] Length = 501 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|323160792|gb|EFZ46724.1| minor capsid protein C [Escherichia coli E128010] Length = 354 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGTHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|323190876|gb|EFZ76143.1| minor capsid protein C [Escherichia coli RN587/1] Length = 439 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|167626504|ref|YP_001677004.1| periplasmic protease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596505|gb|ABZ86503.1| peptidase, S49 (protease IV) family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 338 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 114/296 (38%), Gaps = 71/296 (23%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA--------------------- 39 ++FV + T V++++V + +FS + + +A Sbjct: 7 IDFVFFALSTALVVIAIVFVVGSFFSLLAKAKQEVTKLAAGKLEINKIGDEYKSTKEQIL 66 Query: 40 ------------------------------RIAIRGQIEDSQELIERIERISRDDSATAL 69 I +G I SQ +E + + TA+ Sbjct: 67 ETLLDKKEYKKFVKEQKKIDKQEKPKQRKFIINFKGDIHASQ--VEDLR-----NEVTAI 119 Query: 70 IV----------SLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 + + SPGG +++++ + + ++AAS GY++S + Sbjct: 120 LAVAVADDEVVVRIDSPGGVVNGYGFAAAQLERIRQAGITLTVCIDQVAASGGYMMSVVA 179 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 N I+AA ++VGSIGV+ P ++ L+K G++++ S K + E + + Sbjct: 180 NKIIAAPFAIVGSIGVVGTVPNIRELLEKNGINVEMHTSGEFKRTLTTVGENTEEGRKKF 239 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + +++ + F + + R P ++ G W G +A ++GL+D + ++ Sbjct: 240 KQDLENIHELFKKHILAYR--PNLDMHKVATGEYWFGKDALELGLVDEIRTYDDYL 293 >gi|323186632|gb|EFZ71964.1| head-tail preconnector protein GP5 [Escherichia coli 1357] Length = 501 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSPGGQATGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + K Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + GL D + + + A Sbjct: 258 MG-TEAAVFEGQSGIEAGLADELINASDAISVMAA 291 >gi|320180588|gb|EFW55518.1| Head-tail preconnector protein GP5 [Shigella boydii ATCC 9905] Length = 439 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|320654518|gb|EFX22546.1| Minor capsid protein C from bacteriophage origin [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 439 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|297621858|ref|YP_003709995.1| putative signal peptide peptidase sppA [Waddlia chondrophila WSU 86-1044] gi|297377159|gb|ADI38989.1| putative signal peptide peptidase sppA [Waddlia chondrophila WSU 86-1044] Length = 346 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 14/239 (5%) Query: 29 SHVEDNSPHVARIAIRGQIED--------SQELIERIERISRDDSATALIVSLSSPGGSA 80 + DN+P + +++I G I SQ L E E + ++D A++V +SSPGG+ Sbjct: 64 TAASDNAPVILKLSISGLIGTESLNMNTVSQILQESREGLFKNDRVKAVLVQISSPGGTV 123 Query: 81 YAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-Q 137 + I+RA+++ K P+ V + AS G I+ A + + A + SL+GS+GVL Sbjct: 124 VDSDGIYRALKQYKKDYNVPIYGFVDGLCASGGMYIASACDKVYATDVSLIGSVGVLSPA 183 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + ++K+GV K + + K +P ++ ++DS Y+ FV +V E+R Sbjct: 184 FFNFTELMEKVGVDAKVLSAGKGKDALNPLRPWKEGEADSLKAIIDSYYNQFVDIVVENR 243 Query: 198 -NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKIKDWN 253 +I + ++ ++A+++G ID G EE + L +G++ ++ Sbjct: 244 PDIKRTHLINDYGAHVYLASKAQELGYIDGSGFTYEETMKLLAKEMGIEDDYYQVVRME 302 >gi|291282672|ref|YP_003499490.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] gi|291283173|ref|YP_003499991.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] gi|290762545|gb|ADD56506.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] gi|290763046|gb|ADD57007.1| Periplasmic serine proteases (ClpP class) [Escherichia coli O55:H7 str. CB9615] Length = 501 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGTHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|260842992|ref|YP_003220770.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257758139|dbj|BAI29636.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] Length = 501 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|300917751|ref|ZP_07134397.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300415028|gb|EFJ98338.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] Length = 426 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 306 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 307 ATASQADVTDVVPATEG 323 >gi|327252651|gb|EGE64308.1| minor capsid protein C [Escherichia coli STEC_7v] Length = 439 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|219681648|ref|YP_002468034.1| possible protease SohB [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219624491|gb|ACL30646.1| possible protease SohB [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 336 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 93/201 (46%), Gaps = 8/201 (3%) Query: 39 ARIAIRGQIEDSQELIERIERISR----DDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + +G + + E++ E IS + +++ L S GG + + +++ Sbjct: 93 FVLDFKGDVY-ANEVVGLREEISAILLVANKHDEVLLRLESSGGVIHGYGLAASQLNRLR 151 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + +I V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P L K + ++ Sbjct: 152 QKGIRLIVSVDKIAASGGYMMACVADYIVSAPFAIIGSIGVVGQIPNFNKLLKKCNIDLE 211 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + K + F + D +++++ F + E R P +S+G W Sbjct: 212 LHTAGDYKRTLTMFGNNTESTRKKFCDELNTTHKLFKSFIKEMR--PSLDIEDVSNGEHW 269 Query: 214 TGAEAKKVGLIDVVGGQEEVW 234 G A + L+D +G +++ Sbjct: 270 FGTIALEKKLVDQIGTSDDIL 290 >gi|74312884|ref|YP_311303.1| putative minor capsid protein [Shigella sonnei Ss046] gi|73856361|gb|AAZ89068.1| putative minor capsid protein precursor [Shigella sonnei Ss046] Length = 426 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|91210523|ref|YP_540509.1| putative prophage capsid assembly protein [Escherichia coli UTI89] gi|187732704|ref|YP_001880064.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|91072097|gb|ABE06978.1| putative capsid assembly protein of prophage [Escherichia coli UTI89] gi|187429696|gb|ACD08970.1| head-tail preconnector protein GP5 [Shigella boydii CDC 3083-94] gi|294489477|gb|ADE88233.1| head-tail preconnector protein [Escherichia coli IHE3034] gi|307627191|gb|ADN71495.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli UM146] Length = 501 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|324116806|gb|EGC10720.1| peptidase S49 [Escherichia coli E1167] Length = 439 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIITRVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGVA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|323942023|gb|EGB38201.1| peptidase S49 [Escherichia coli E482] Length = 362 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 306 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 307 ATASQADVTDVVPATEG 323 >gi|320198084|gb|EFW72692.1| Head-tail preconnector protein GP5 [Escherichia coli EC4100B] Length = 439 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 109/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVCRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + ++ +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI-TIMRDALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + +P M+ Sbjct: 320 ATASQADVTGVVPAMEG 336 >gi|9626248|ref|NP_040584.1| capsid component [Enterobacteria phage lambda] gi|238903122|ref|YP_002928918.1| Minor capsid protein C (GPC) [Escherichia coli BW2952] gi|253774242|ref|YP_003037073.1| peptidase S49 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|137565|sp|P03711|VCAC_LAMBD RecName: Full=Minor capsid protein C; AltName: Full=Putative peptidase GPC; Short=GPC; Contains: RecName: Full=Capsid assembly protein NU3 gi|215109|gb|AAA96537.1| C (capsid component;439) [Enterobacteria phage lambda] gi|194021578|gb|ACF32387.1| capsid component [Enterobacteria phage DE3] gi|238861774|gb|ACR63772.1| Minor capsid protein C (GPC) [Escherichia coli BW2952] gi|242376543|emb|CAQ31251.1| enterobacteria phage lambda, capsid component [Escherichia coli BL21(DE3)] gi|253325286|gb|ACT29888.1| peptidase S49 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976951|gb|ACT42621.1| capsid component [Escherichia coli BL21(DE3)] Length = 439 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQVV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|315252463|gb|EFU32431.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 426 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 306 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 307 ATASQADVTDVVPATEG 323 >gi|217977711|ref|YP_002361858.1| peptidase S49 [Methylocella silvestris BL2] gi|217503087|gb|ACK50496.1| peptidase S49 [Methylocella silvestris BL2] Length = 445 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 14/223 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVS 72 + S +ARI I G++ + + + ++ D A+++ Sbjct: 56 AAGSSGYQLQDGLARIPILGELVNRAASLAAAAGFTSYESIGAQLRAAVADPGVRAILLE 115 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG A +++ N KPV+ V+ +A SA Y I+ ++ IV +S +GSI Sbjct: 116 IDSPGGEASGAMEAGALVREAANAKPVVAFVNGLAGSAAYAIASGASNIVVTPSSSLGSI 175 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + + G+ + + K + + + P A +Q +D Y FV+ Sbjct: 176 GVVLLHLDRSEAIARAGLKPTLISAGAHKTDGTSLHALAPDARARIQASIDELYDLFVKT 235 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 V+ R + ++ ++ GA A VGL D G + Sbjct: 236 VASHRGLTEAVVRA-TEAGLFMGARAVSVGLADETGDFKTAMA 277 >gi|297748624|gb|ADI51170.1| protease IV [Chlamydia trachomatis D-EC] gi|297749504|gb|ADI52182.1| protease IV [Chlamydia trachomatis D-LC] Length = 346 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 + +P +A I I I S +R++ + ++V + PGG + Sbjct: 72 ELGKTAPIIAVIDINDAIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFE 131 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 + + + K + PV V + AS GY ++C ++ I +SL+GSIGV Y Sbjct: 132 IDRMCATLSFWKKQWGIPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVRSGPYF 191 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +PFS + Q +VD+ Y FV V + R Sbjct: 192 SVKEGLQRHGVETAILTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSK 251 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 + +K + R++ +A + GL+D + QE+ + L A G+ + R I Sbjct: 252 LSKEKLTKVLGARVFIAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 304 >gi|307545278|ref|YP_003897757.1| inner membrane peptidase [Halomonas elongata DSM 2581] gi|307217302|emb|CBV42572.1| predicted inner membrane peptidase [Halomonas elongata DSM 2581] Length = 343 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 23/275 (8%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGS 79 S + P V + G ++ S +E+ ++ + D ++V L S GG Sbjct: 82 SRGKQGDAPRPTVWVLDFHGDLKASATGKLAEEVSAVLDAAEQGDE---VVVRLESAGGL 138 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A + +++ V ++AAS GYL++C ++ + AA +++GSIGV+ Q Sbjct: 139 VHAYGHAAAEMDRLRQAGLSTTVCVDKVAASGGYLMACCADRLRAAPFAVLGSIGVVAQL 198 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P V L + + ++ + + K + F E + Q +D+ + F R V+E R Sbjct: 199 PNVHRLLKRHDIDVEVLTAGHYKRTLTVFGENTEEGRQKFLAELDTVHDLFKRYVAERR- 257 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 P ++ G W G EA GLID +G E + ++ + Sbjct: 258 -PGLDIEAVATGEAWHGTEALPRGLIDEIGTSEAYLAERM------NDARVIALSIQARR 310 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGL-WAVWN 292 + LS+S +E ++ V+ L ++W Sbjct: 311 GLAERLGLSVSQGIERSVE----RGVEALDASLWQ 341 >gi|323185917|gb|EFZ71274.1| minor capsid protein C [Escherichia coli 1357] Length = 419 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 62 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 121 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 122 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 181 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 182 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 241 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 242 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 299 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 300 ATASQADVTDVVPATEG 316 >gi|74318647|ref|YP_316387.1| putative periplasmic protease [Thiobacillus denitrificans ATCC 25259] gi|74058142|gb|AAZ98582.1| serine protease SohB [Thiobacillus denitrificans ATCC 25259] Length = 333 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 12/220 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +P + +G I S +E+ +E D A++V L S GG Sbjct: 84 ETTKATPCSYLLDFKGDIRASAVAALREEVSAVLEVAQPGD---AVLVRLESGGGLVNRY 140 Query: 84 EAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + +++ + P+ V +AAS GYL++ ++ IVA+ +LVGSIGV+ Q P Sbjct: 141 GLGAAQLLRIRDAQLPLTVMVDSVAASGGYLMAAVADTIVASPFALVGSIGVVAQTPNFH 200 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +L + + + K + F E +++ +D + F V R P Sbjct: 201 RWLRARDIDWEQFTAGQYKRTVTLFGENTETGRAKLREELDDIHALFRAFVQARR--PQL 258 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 ++ G W G+ A ++GL+D + +E+ ++ G Sbjct: 259 DVDKVATGETWLGSRALELGLVDEIATSDELIRAACRRGK 298 >gi|260844392|ref|YP_003222170.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|260844530|ref|YP_003222308.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257759539|dbj|BAI31036.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] gi|257759677|dbj|BAI31174.1| putative head protein/prohead protease [Escherichia coli O103:H2 str. 12009] Length = 501 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|145517316|ref|XP_001444541.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411963|emb|CAK77144.1| unnamed protein product [Paramecium tetraurelia] Length = 239 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 9/211 (4%) Query: 34 NSPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 P + I + G I+ ++ +++++I + + AL V ++SPGG + I + + Sbjct: 9 TKPRIPIIRLSGVIKQKSGDKIQDQLDKI-KSKNLCALAVLINSPGGLPVQSDIICQKLN 67 Query: 92 KVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 K + P+ T ++AAS GY + C + + A ++SLVGS+GV+ Q+ +K L+KLG Sbjct: 68 LFKQKHNIPIYTFAEDVAASGGYFVLCIGDKVFADQSSLVGSVGVISQWHGIKKALEKLG 127 Query: 150 VSIKSVKSSP--MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 + K + S+ + S FSE NP+ D ++ ++ F+ V R D+ + Sbjct: 128 IEAKFLSSNDQIHEVVNSAFSEFNPQGATQWVDKLEYTHQMFIDHVKSYRKNIVDQ--NV 185 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ G +AK++GLID G EEV L+ Sbjct: 186 FKAEVYNGEQAKQLGLIDDFGNYEEVLNKLH 216 >gi|218704649|ref|YP_002412168.1| Minor capsid protein [Escherichia coli UMN026] gi|218431746|emb|CAR12628.1| Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin [Escherichia coli UMN026] Length = 439 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|323180068|gb|EFZ65623.1| head-tail preconnector protein GP5 domain protein [Escherichia coli 1180] Length = 399 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 1/188 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ +++ D +++ + SPGG A I +++ +KPV ++ A SA Sbjct: 2 DGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSA 61 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 L++ A + + +TS +GSIGV+ + L + GV I + S K + + F + Sbjct: 62 AMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEAL 121 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + Q MQ +D++ F V+ + D ++ ++ G + GL D + Sbjct: 122 PAEVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVTG-TEAAVFEGQSGIEAGLADELINA 180 Query: 231 EEVWQSLY 238 + + Sbjct: 181 SDAISVMA 188 >gi|300825402|ref|ZP_07105476.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] gi|300522129|gb|EFK43198.1| putative signal peptide peptidase SppA [Escherichia coli MS 119-7] Length = 426 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|293418637|ref|ZP_06661072.1| capsid protein [Escherichia coli B088] gi|291325165|gb|EFE64580.1| capsid protein [Escherichia coli B088] Length = 439 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|284921449|emb|CBG34518.1| phage minor capsid protein [contains: capsid assembly protein] [Escherichia coli 042] Length = 439 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|291281485|ref|YP_003498303.1| Minor capsid protein C [Escherichia coli O55:H7 str. CB9615] gi|290761358|gb|ADD55319.1| Minor capsid protein C [Escherichia coli O55:H7 str. CB9615] Length = 439 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|330910981|gb|EGH39491.1| head-tail preconnector protein GP5 [Escherichia coli AA86] Length = 439 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|319406644|emb|CBI80285.1| putative capsid protein of prophage [Bartonella sp. 1-1C] Length = 348 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 16/218 (7%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +VA + + G + + L A+++ + S GG A Sbjct: 59 QNNVAILPVHGTLVRRSAWLGALSGLTSYEGLSASFREAMAQPDVRAVLLDIDSGGGEAG 118 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+C+++ I A T +VGSIGV+ + Sbjct: 119 GVFDLVEEFQALSKQYGKPIWAHANEFACSAAYAIACSASQIWVARTGVVGSIGVVCAHL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G V K +P + +A MQ Y FV LV+++R + Sbjct: 179 DQSYADEKQGHKWTFVFEGDHKVHGNPHEPLADEAKIKMQADCALLYEMFVDLVAKNRAM 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + G++A +GL D G + ++L Sbjct: 239 SAAAIRE-TKAETFIGSQAITLGLADAQGTLAQALEAL 275 >gi|315252353|gb|EFU32321.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1] Length = 426 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 306 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 307 ATASQADVTDVVPATEG 323 >gi|296436953|gb|ADH19123.1| exported protease IV [Chlamydia trachomatis G/11222] Length = 331 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 + +P +A I I I S +R++ + ++V + PGG + Sbjct: 57 ELGKTAPIIAVIDINDAIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFE 116 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 + + + K + PV V + AS GY ++C ++ I +SL+GSIGV Y Sbjct: 117 IDRMCATLSFWKKQWGIPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVRSGPYF 176 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +PFS + Q +VD+ Y FV V + R Sbjct: 177 SVKEGLQRHGVETAILTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSK 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 + +K + R++ +A + GL+D + QE+ + L A G+ + R I Sbjct: 237 LSKEKLTKVLGARVFIAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|291621953|emb|CAX64986.1| gp05 protein [Vibrio phage VP58.5] Length = 423 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 1/192 (0%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I + + + D +++ S GG A + R I + +KPVI V+E Sbjct: 87 PITSYELIRHDYDTALNDPEVKLIVMEFDSGGGEAAGCFDLARHILSTRGKKPVIAFVNE 146 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 SA Y ++C + + ++ GSIGV+ + K+G+SI+ S KA+ S Sbjct: 147 SCYSAAYALACCCDQVYLTSSAGAGSIGVICGRLDQTEYNRKMGLSIELFVSGDYKADFS 206 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P ++ Q +Q ++ F LV+E+R + ++ L G +TG A GL D Sbjct: 207 PHKVLSDDERQRLQALIVQLGSEFHNLVAEARGMTAEQVKALKAG-CFTGRVAVDNGLAD 265 Query: 226 VVGGQEEVWQSL 237 V Q+E + L Sbjct: 266 GVMSQDEFYNYL 277 >gi|300929060|ref|ZP_07144554.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] gi|300462933|gb|EFK26426.1| putative signal peptide peptidase SppA [Escherichia coli MS 187-1] Length = 426 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|209884719|ref|YP_002288576.1| peptidase S49 [Oligotropha carboxidovorans OM5] gi|209872915|gb|ACI92711.1| peptidase S49 [Oligotropha carboxidovorans OM5] Length = 432 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 3/205 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 A I + + + + +++ D + ++I+ + SPGG A +++V ++K Sbjct: 91 AWIGAKSGLTSYEGIQHQLKSARDDAAVKSIILDIHSPGGEAVGAFETAAIVREVASKKK 150 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+ V+ MAASA Y I + IV ET + GSIGV+ + LD G++ + + Sbjct: 151 VVAVVNGMAASAAYAIPSGATEIVTTETGVSGSIGVVLLHADFSRKLDHDGITPTLIHAG 210 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGA 216 K + + + +Q VD+ Y F+ V++ R + ++ R + G Sbjct: 211 AHKVDGNSLEPLTDAVKSDLQAEVDAFYETFLATVAKGRGGRLSVAAARK-TEARTFIGK 269 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALG 241 A GL D VG E V L G Sbjct: 270 AAVDAGLADRVGSFESVLAELSRAG 294 >gi|323947947|gb|EGB43942.1| peptidase S49 [Escherichia coli H120] Length = 354 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 306 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 307 ATASQADVTDVVPATEG 323 >gi|300936151|ref|ZP_07151089.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] gi|300458690|gb|EFK22183.1| putative signal peptide peptidase SppA [Escherichia coli MS 21-1] Length = 426 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|15605222|ref|NP_220008.1| protease [Chlamydia trachomatis D/UW-3/CX] gi|76789231|ref|YP_328317.1| protease IV [Chlamydia trachomatis A/HAR-13] gi|237802922|ref|YP_002888116.1| exported protease IV [Chlamydia trachomatis B/Jali20/OT] gi|237804844|ref|YP_002888998.1| exported protease IV [Chlamydia trachomatis B/TZ1A828/OT] gi|255311310|ref|ZP_05353880.1| exported protease IV [Chlamydia trachomatis 6276] gi|255317611|ref|ZP_05358857.1| exported protease IV [Chlamydia trachomatis 6276s] gi|6578107|gb|AAC68094.2| Protease [Chlamydia trachomatis D/UW-3/CX] gi|76167761|gb|AAX50769.1| protease IV [Chlamydia trachomatis A/HAR-13] gi|231273144|emb|CAX10057.1| exported protease IV [Chlamydia trachomatis B/TZ1A828/OT] gi|231274156|emb|CAX10950.1| exported protease IV [Chlamydia trachomatis B/Jali20/OT] gi|296436025|gb|ADH18199.1| exported protease IV [Chlamydia trachomatis G/9768] gi|296437886|gb|ADH20047.1| exported protease IV [Chlamydia trachomatis G/11074] gi|297140386|gb|ADH97144.1| exported protease IV [Chlamydia trachomatis G/9301] Length = 331 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 13/233 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 + +P +A I I I S +R++ + ++V + PGG + Sbjct: 57 ELGKTAPIIAVIDINDAIMASGGAAKRLQSALQPLNEAPYKGRVKGILVKIDCPGGEVFE 116 Query: 83 GEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 + + + K + PV V + AS GY ++C ++ I +SL+GSIGV Y Sbjct: 117 IDRMCATLSFWKKQWGIPVHVFVSGLCASGGYYVACIADKIGTTSSSLIGSIGVRSGPYF 176 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +PFS + Q +VD+ Y FV V + R Sbjct: 177 SVKEGLQRHGVETAILTAGDDKAPLNPFSSWTEEEYAERQGIVDAFYEQFVDHVVKYRSK 236 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY-ALGVDQSIRKI 249 + +K + R++ +A + GL+D + QE+ + L A G+ + R I Sbjct: 237 LSKEKLTKVLGARVFIAKQALEEGLVDAINQTQEQALEELAEACGIKDNYRVI 289 >gi|323963686|gb|EGB59201.1| peptidase S49 [Escherichia coli M863] Length = 439 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVAGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|9630469|ref|NP_046900.1| gp5 [Enterobacteria phage N15] gi|3192688|gb|AAC19041.1| gp5 [Enterobacteria phage N15] Length = 447 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 91/225 (40%), Gaps = 21/225 (9%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA + + G + +I R+++ D +++ + +PGG Sbjct: 84 VAVLPVSGTLVSKTRSLQPYSGMTGYNGIIARLQQAISDPGVDGILLDMDTPGGMVSGAF 143 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++++ KP+ ++M SAG LI+ +++ + +T+ GSIGV+ + Sbjct: 144 DCADIIARMRDIKPIWALANDMNCSAGQLIASSASRRLVTQTARTGSIGVMMAHSNYGAA 203 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L GV + + S K + +P+ ++ Q +D++ F VS + Sbjct: 204 LKTNGVEVSLIYSGDHKVDGNPYEKLPEDVRADFQTRIDATRQMFAEKVSAYTGMSVQDV 263 Query: 205 LVLSDGRIWTGAEAKKVGLIDV-------VGGQEEVWQSLYALGV 242 L ++ +++G E+ GL D +G E + + Sbjct: 264 LD-TEAAVFSGQESVDNGLADELVNNTDALGVMREALDRRKKITI 307 >gi|26990583|ref|NP_746008.1| phage minor capsid protein C, putative [Pseudomonas putida KT2440] gi|24985565|gb|AAN69472.1|AE016582_10 phage minor capsid protein C, putative [Pseudomonas putida KT2440] Length = 323 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 1/192 (0%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 + + L + + D +++ + SPGGSA + I+ KP+ V+ Sbjct: 100 TMTSYEGLRAALNKAITDPMVEHIVLDIDSPGGSAVGAFELAADIRAATKIKPITGLVNF 159 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 MA S GYLI+ A +V + TS VGSIGV+ + ++ +GV + +V + K + S Sbjct: 160 MAYSGGYLIASACTEVVVSLTSGVGSIGVVASHMDRSKMIEGMGVKVTTVFAGAHKNDLS 219 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + +++Q++ +VV SY F V+E R + ++ + G+ A +GL D Sbjct: 220 PNEPITEQSLQVLNEVVQESYQLFTTHVAEYRGRDVADIIA-TEAACYRGSSAIAIGLAD 278 Query: 226 VVGGQEEVWQSL 237 + + +L Sbjct: 279 RLESPQLAVDNL 290 >gi|62184771|ref|YP_219556.1| putative exported protease [Chlamydophila abortus S26/3] gi|62147838|emb|CAH63584.1| putative exported protease [Chlamydophila abortus S26/3] Length = 335 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 12/222 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERISR-------DDSATALIVSLSSPGGSAYA 82 V ++P +A + ++ I S+ + I+ D +I+ + PGG + Sbjct: 58 DVGKDAPIIAVLEMKDVIASSKHTAKIIQEAITTLDSPPYKDRVKGIIIDMDCPGGEVFE 117 Query: 83 GEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 ++ IQ K + + PV V+ + AS GY ++CA++ I + +SL+GSIGVL Y Sbjct: 118 ISRVYSTIQFWKQRTQCPVYVFVNGLCASGGYYVACAADKIYSTSSSLIGSIGVLSGPYF 177 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN- 198 VK L + GV + + KA +P++E K ++ Q+++D Y FV +V +R Sbjct: 178 NVKEGLSRYGVQSDLLIAGKDKAPMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPL 237 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYA 239 + DK + + R+++ +A + G IDV +++V Q L A Sbjct: 238 LTKDKLVSVLGARLYSPEKALEEGYIDVTNVTKQQVLQDLVA 279 >gi|291281130|ref|YP_003497948.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] gi|290761003|gb|ADD54964.1| Head-tail preconnector protein GP5 [Escherichia coli O55:H7 str. CB9615] Length = 501 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADIIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQGGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|156393613|ref|XP_001636422.1| predicted protein [Nematostella vectensis] gi|156223525|gb|EDO44359.1| predicted protein [Nematostella vectensis] Length = 279 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%) Query: 40 RIAIRGQIEDS---------QELIERIERISRDDSA--TALIVSLSSPGGSAYAGEAIFR 88 I ++G I S + + + I+R A+ + ++S GGS I+ Sbjct: 17 IIRLQGIINASSSNHRALSLRRVEKAIDRAFEVKKVAPKAVCLEINSTGGSPVQSNLIYT 76 Query: 89 AIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I++ N K PV++ V + A S GY +S A + I S VGSIG + V + Sbjct: 77 RIREQANDKKIPVLSFVEDHALSGGYWLSLAGDEIFVDPNSAVGSIGAVSSNVGVVEAMK 136 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 KLG+ + V K +P + P+ V+ ++ ++ ++ F+ LV E R + Sbjct: 137 KLGLEYRPVVMGEHKVRMNPMEPLKPEDVEWVKKILAEVHNNFIDLVKERRTKLDTTSKT 196 Query: 207 LSDGRIWTGAEAKKVGLIDVVGG 229 + G I+ G EA ++GL+D + Sbjct: 197 VFSGDIFLGKEAVRIGLVDAITT 219 >gi|183221224|ref|YP_001839220.1| S49 family peptidase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911315|ref|YP_001962870.1| signal peptide peptidase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775991|gb|ABZ94292.1| Signal peptide peptidase (protease IV) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779646|gb|ABZ97944.1| Putative petidase S49, protease IV family [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 544 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 21/244 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQ-------------- 51 +KI +R +V TV FS V + + G I Sbjct: 249 RKIFSRVY--PIVYQTVKEFSLFPKAN---KEVVILPLEGGITGGDYLHKNRENGKIEAF 303 Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 LI ++ + D A+I+ +SSPGGSA+ E I + I ++K KPV + AS G Sbjct: 304 SLIPTLKALGEDKKIKAVILEISSPGGSAFYSEQIHQEILELKKTKPVTAYFKDTVASGG 363 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ A++ I A+ + GSIG + ++ K ++ ++V P + S F ++ Sbjct: 364 YYIATAADYITASPVCITGSIGAVSIRANLQKLYKKFHLNKEAVGFYPFRDIHSEFQPLS 423 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 ++V ++ + F + VSE R+IP + + GR++ + ++D +GG Sbjct: 424 KQSVLYLESQIKKIEGLFYKRVSEGRDIPLKELPNIGMGRVYLPTT--ENKIVDSLGGLL 481 Query: 232 EVWQ 235 + + Sbjct: 482 DAIE 485 >gi|331682243|ref|ZP_08382862.1| minor capsid protein C (GPC) [Escherichia coli H299] gi|331079874|gb|EGI51053.1| minor capsid protein C (GPC) [Escherichia coli H299] Length = 439 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQYRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|110641352|ref|YP_669082.1| minor capsid protein C [Escherichia coli 536] gi|191173120|ref|ZP_03034653.1| minor capsid protein C [Escherichia coli F11] gi|110342944|gb|ABG69181.1| minor capsid protein C [Escherichia coli 536] gi|190906665|gb|EDV66271.1| minor capsid protein C [Escherichia coli F11] Length = 439 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRIFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|300897573|ref|ZP_07115983.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] gi|300358676|gb|EFJ74546.1| putative signal peptide peptidase SppA [Escherichia coli MS 198-1] Length = 403 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|320659114|gb|EFX26713.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O55:H7 str. USDA 5905] Length = 501 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADIIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQGGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G + GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIEAGLADELINASDAISVMA 290 >gi|296446060|ref|ZP_06888009.1| peptidase S49 [Methylosinus trichosporium OB3b] gi|296256419|gb|EFH03497.1| peptidase S49 [Methylosinus trichosporium OB3b] Length = 439 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 14/214 (6%) Query: 35 SPHVARIAIRGQIED------------SQELIERIERISR-DDSATALIVSLSSPGGSAY 81 +A + + G++ S E E I R + D +I+ +++PGG Sbjct: 69 EDGIALVNVFGELVTRGAWLNAWSGLTSYEGFEAIMRAAAVDSRVRGIILDMNTPGGQGA 128 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + ++ + +RKPV+ V+ AASAGY I+ + I++ + VGSIGV++ + Sbjct: 129 GAMEAGKLVRAIADRKPVVAFVNAQAASAGYAIASGATRIISIPSGSVGSIGVVWMHVDR 188 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 +K G + + KA+ PF+ ++ A +Q + Y FVR V++ R++P Sbjct: 189 SAEHEKAGRKVTVLTEGAYKADGHPFAALDDGARGRIQSQMRELYDDFVRTVADHRDLPE 248 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + R++ G A + GL D VG ++ + Sbjct: 249 RAVRD-TQARVYRGDRAVENGLADAVGTLDDAFA 281 >gi|46445858|ref|YP_007223.1| putative proteinase IV [Candidatus Protochlamydia amoebophila UWE25] gi|46399499|emb|CAF22948.1| putative proteinase IV [Candidatus Protochlamydia amoebophila UWE25] Length = 345 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 17/260 (6%) Query: 31 VEDNSPHVARIAIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 V ++P + ++ I G I Q+LIE E +++ AL++ +++PGG+ Sbjct: 64 VASDAPVILQLNIDGIIGTENLNTQTIRQQLIESREGAYKNNRVKALLLYINTPGGTVAD 123 Query: 83 GEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF-QYP 139 + IF+ + K + PV + + AS G I+ A++ I A++ SL+GS+GV+ + Sbjct: 124 ADGIFQLLADYKKKYQVPVYAYIDGLCASGGMYIALAADKIYASDISLIGSVGVIAPTFM 183 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN- 198 V LDKLGV ++ + K +P P + ++D Y FV LVS R Sbjct: 184 NVTKLLDKLGVETLTISAGKDKDAMNPLRPWKPGEEDNYRQIIDYYYTHFVDLVSSHRPA 243 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG--QEEVWQSLYALGVDQSIRKIKDWNPPK 256 + +K + ++ A + G IDV G E + + L +G+D ++ K Sbjct: 244 LSKEKLVKDYGAHVFPAPNAVEKGYIDVSGATISETLKELLMTIGIDNDHYQVIRLE-NK 302 Query: 257 NYWFCDLKNLSISSLLEDTI 276 +W + SSLL TI Sbjct: 303 GWWKGLFSSQ--SSLLNGTI 320 >gi|21672552|ref|NP_660619.1| putative periplasmic protease [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009272|sp|Q8K9P8|SOHB_BUCAP RecName: Full=Probable protease sohB gi|21623177|gb|AAM67830.1| possible protease SohB [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 342 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 97/216 (44%), Gaps = 12/216 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAY 81 ++ V + + +G I + E+ + ++DD +++ L S GG + Sbjct: 87 NNIVTLKKKTLFVLDFKGGIHAHEVIGLREEISAILLAANKDDE---VLLRLESSGGVIH 143 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +++++ K +I + ++AAS GY+++C ++ I++A +++GSIGV+ Q P Sbjct: 144 GYGLAAAQLERLRQNKIRLIISIDKIAASGGYMMACVADYIISAPFAIIGSIGVVGQLPN 203 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 L K + ++ + K + F + + ++ ++ F + + + R P Sbjct: 204 FNKLLKKCNIDVELHTAGDYKRTLTMFGQNTELTRKKFCQELNLTHEIFKKFIKKMR--P 261 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 +S+G W G A K L+D + + + S Sbjct: 262 CLDIENISNGEHWFGTIAFKKNLVDEINTSDNILMS 297 >gi|324014985|gb|EGB84204.1| putative signal peptide peptidase SppA [Escherichia coli MS 60-1] Length = 426 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRIFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 306 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 307 ATASQADVTDVVPATEG 323 >gi|323174539|gb|EFZ60162.1| head-tail preconnector protein GP5 [Escherichia coli LT-68] Length = 402 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 1/189 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 ++ +++ D +++ + SPGG A I +++ KPV ++ A SA Sbjct: 5 DGIVACLQQAMADTQVRGVLLDIDSPGGQATGAFDCADMIYRLRQLKPVWALCNDTACSA 64 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 L++ A + + +TS +GSIGV+ + L + GV I + + K + + F + Sbjct: 65 AMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGHLAQAGVDITLIYAGSHKVDGNQFESL 124 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 K Q MQ +D++ F V+ + D + ++ ++ G + GL D + Sbjct: 125 PAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAVMG-TEAAVFEGQSGIEAGLADELINA 183 Query: 231 EEVWQSLYA 239 + + A Sbjct: 184 SDAISVMAA 192 >gi|309797023|ref|ZP_07691422.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] gi|308119306|gb|EFO56568.1| putative signal peptide peptidase SppA [Escherichia coli MS 145-7] Length = 426 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPIVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 249 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 277 >gi|320664993|gb|EFX32107.1| peptidase S49 [Escherichia coli O157:H7 str. LSU-61] Length = 439 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 106/257 (41%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I +++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIALLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SA L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSACQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|320643596|gb|EFX12745.1| peptidase S49 [Escherichia coli O157:H- str. 493-89] gi|320648937|gb|EFX17541.1| peptidase S49 [Escherichia coli O157:H- str. H 2687] Length = 439 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 106/257 (41%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I +++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIALLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SA L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSACQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|331673505|ref|ZP_08374273.1| head-tail preconnector protein GP5 [Escherichia coli TA280] gi|331069703|gb|EGI41090.1| head-tail preconnector protein GP5 [Escherichia coli TA280] Length = 492 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 14/224 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + L R++ D +++ + SPGG A Sbjct: 78 IAILPVSGTLVHKLGTLRPYSGMTGYDGLTARLQMAVNDPDVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++MA SA L++ A + +T+ +GSIGV+ + + Sbjct: 138 DCADMIYRLREQKPVWALCNDMACSAAMLLAAACTHRLVTQTAKIGSIGVMMAHTSYEKQ 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D + FV V+ + + Sbjct: 198 LAQEGVDITLIYSGQHKVDGNSIQALPAGVRADFQRRIDEARRMFVDKVARYTGLSSEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + ++ ++ G GL D + + + + + D ++ Sbjct: 258 MN-TEAAVYDGQAGIDAGLADQLINAADAVEVMVSALNDSVTKE 300 >gi|320197690|gb|EFW72301.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327] Length = 439 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 107/257 (41%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIISRLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + + + GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQIARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|209919254|ref|YP_002293338.1| putative phage capsid structural protein [Escherichia coli SE11] gi|209912513|dbj|BAG77587.1| putative phage capsid structural protein [Escherichia coli SE11] Length = 439 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|15801354|ref|NP_287371.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 EDL933] gi|15830887|ref|NP_309660.1| minor capsid protein [Escherichia coli O157:H7 str. Sakai] gi|15831430|ref|NP_310203.1| minor capsid protein precursor [Escherichia coli O157:H7 str. Sakai] gi|168749764|ref|ZP_02774786.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|168752425|ref|ZP_02777447.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|168756502|ref|ZP_02781509.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|168758740|ref|ZP_02783747.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|168762579|ref|ZP_02787586.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|168764760|ref|ZP_02789767.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|168771031|ref|ZP_02796038.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|168771214|ref|ZP_02796221.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|168776026|ref|ZP_02801033.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168777928|ref|ZP_02802935.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168778011|ref|ZP_02803018.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168778058|ref|ZP_02803065.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|168782498|ref|ZP_02807505.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|168784221|ref|ZP_02809228.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|168784369|ref|ZP_02809376.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|168787638|ref|ZP_02812645.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|168790271|ref|ZP_02815278.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|168800423|ref|ZP_02825430.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|168802662|ref|ZP_02827669.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|195938793|ref|ZP_03084175.1| putative minor capsid protein precursor [Escherichia coli O157:H7 str. EC4024] gi|195939967|ref|ZP_03085349.1| putative minor capsid protein precursor [Escherichia coli O157:H7 str. EC4024] gi|208807522|ref|ZP_03249859.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208810835|ref|ZP_03252668.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208814915|ref|ZP_03256094.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208816407|ref|ZP_03257586.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208821699|ref|ZP_03262019.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|208822514|ref|ZP_03262833.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|209398131|ref|YP_002270077.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|209399799|ref|YP_002270223.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|217328033|ref|ZP_03444115.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|217329770|ref|ZP_03445847.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|254792619|ref|YP_003077456.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|254792758|ref|YP_003077595.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|260855340|ref|YP_003229231.1| putative capsid protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|261227262|ref|ZP_05941543.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. FRIK2000] gi|261258730|ref|ZP_05951263.1| putative capsid protein/prohead protease [Escherichia coli O157:H7 str. FRIK966] gi|12514814|gb|AAG55983.1|AE005330_15 putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. EDL933] gi|13361097|dbj|BAB35056.1| minor capsid protein [Escherichia coli O157:H7 str. Sakai] gi|13361642|dbj|BAB35599.1| putative minor capsid protein precursor [Escherichia coli O157:H7 str. Sakai] gi|187766859|gb|EDU30703.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|187766895|gb|EDU30739.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|187766931|gb|EDU30775.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|187768547|gb|EDU32391.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4196] gi|188013730|gb|EDU51852.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|188016014|gb|EDU54136.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4113] gi|188998454|gb|EDU67454.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|188998583|gb|EDU67569.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|189000028|gb|EDU69014.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4076] gi|189354482|gb|EDU72901.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|189356384|gb|EDU74803.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4401] gi|189359977|gb|EDU78396.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|189360133|gb|EDU78552.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4486] gi|189365302|gb|EDU83718.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|189367179|gb|EDU85595.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4501] gi|189370253|gb|EDU88669.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|189372400|gb|EDU90816.1| minor capsid protein C [Escherichia coli O157:H7 str. EC869] gi|189375403|gb|EDU93819.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|189377239|gb|EDU95655.1| minor capsid protein C [Escherichia coli O157:H7 str. EC508] gi|208724341|gb|EDZ74049.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208727323|gb|EDZ76924.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4206] gi|208731563|gb|EDZ80251.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208733055|gb|EDZ81743.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4045] gi|208737999|gb|EDZ85682.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|208741822|gb|EDZ89504.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4042] gi|209159531|gb|ACI36964.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|209161199|gb|ACI38632.1| minor capsid protein C [Escherichia coli O157:H7 str. EC4115] gi|217317189|gb|EEC25620.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|217318460|gb|EEC26886.1| minor capsid protein C [Escherichia coli O157:H7 str. TW14588] gi|254592019|gb|ACT71380.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|254592158|gb|ACT71519.1| putative capsid protein of prophage CP-933X [Escherichia coli O157:H7 str. TW14359] gi|257753989|dbj|BAI25491.1| putative capsid protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|320187947|gb|EFW62615.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC1212] gi|320191964|gb|EFW66610.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. EC1212] gi|320638195|gb|EFX07937.1| putative capsid protein/prohead protease [Escherichia coli O157:H7 str. G5101] gi|326338655|gb|EGD62480.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1125] gi|326348089|gb|EGD71798.1| Head-tail preconnector protein GP5 [Escherichia coli O157:H7 str. 1044] Length = 439 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|260854308|ref|YP_003228199.1| putative minor capsid protein [Escherichia coli O26:H11 str. 11368] gi|260855084|ref|YP_003228975.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|260855722|ref|YP_003229613.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|257752957|dbj|BAI24459.1| putative minor capsid protein [Escherichia coli O26:H11 str. 11368] gi|257753733|dbj|BAI25235.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] gi|257754371|dbj|BAI25873.1| putative head protein/prohead protease [Escherichia coli O26:H11 str. 11368] Length = 439 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G EA GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + +P M+ Sbjct: 320 ATASQADVTGVVPAMEG 336 >gi|209917788|ref|YP_002291872.1| putative phage minor capsid protein [Escherichia coli SE11] gi|209911047|dbj|BAG76121.1| putative phage minor capsid protein [Escherichia coli SE11] gi|320201852|gb|EFW76428.1| Head-tail preconnector protein GP5 [Escherichia coli EC4100B] gi|323965007|gb|EGB60470.1| peptidase S49 [Escherichia coli M863] Length = 439 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|323144853|ref|ZP_08079422.1| putative signal peptide peptidase SppA, 36K type [Succinatimonas hippei YIT 12066] gi|322415378|gb|EFY06143.1| putative signal peptide peptidase SppA, 36K type [Succinatimonas hippei YIT 12066] Length = 379 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 112/255 (43%), Gaps = 6/255 (2%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKV 93 ++ + G + ++ +L + I+ I + +IV+L+SPGG + + ++ Sbjct: 123 NLYVVNFVGSTKGNEVKKLRKEIDAILDVATPKDEVIVNLTSPGGMVNSYGLCASQLARI 182 Query: 94 KNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 ++R + V +AAS GYL++ ++ IVAA S +GSIGV+ P + LDK V Sbjct: 183 RDRGIKLTCTVDSVAASGGYLMASVADHIVAAPFSYIGSIGVIAGIPNFRKVLDKYDVEY 242 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + K S E + + ++ +++ + F V + R P+ ++ G Sbjct: 243 EQITAGKYKRTLSMLGENTQEGRKKFKEELEAIHARFKEQVQKYR--PFINIDEVATGEY 300 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 W ++A K+ L+D + +E A +++ + ++ + + + + Sbjct: 301 WLASDALKLKLVDEIATSDEYISKKVAQTYGCALQIMCARKQKRSLLSKLKQLILLKHIK 360 Query: 273 EDTIPLMKQTKVQGL 287 D L+ K Sbjct: 361 SDIGKLLLSAKDDEF 375 >gi|309704860|emb|CBJ04212.1| putative minor capsid protein [Escherichia coli ETEC H10407] Length = 439 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|89898686|ref|YP_515796.1| periplasmic serine proteases IV [Chlamydophila felis Fe/C-56] gi|89332058|dbj|BAE81651.1| periplasmic serine proteases IV [Chlamydophila felis Fe/C-56] Length = 338 Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 123/255 (48%), Gaps = 14/255 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + ++P +A + ++ I + Q+ I ++ D +I+ + PGG + Sbjct: 61 DLGKDAPIIAVLEMKDVISSAKHTARILQDAITTLDSAPYKDRVKGIIIDMDCPGGEVFE 120 Query: 83 GEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 + IQ K + P+ V+ + AS GY ++CA++ I + +SL+GS+GVL Y Sbjct: 121 IARTYSVIQFWKQRTNCPIYVFVNGLCASGGYYVACAADKIYSTSSSLIGSVGVLSGPYF 180 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN- 198 VK L + GV + + KA +P++E K ++ Q+V++ Y FV +V +R Sbjct: 181 NVKEGLSRYGVQSDLLTAGKDKAPMNPYTEWTTKDREIRQEVINYLYGQFVDVVVTNRPL 240 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + DK + + R+++ +A + G +DVV +++V Q L + ++ ++ + Sbjct: 241 LTKDKLVSVLGARLYSPEKALEEGYVDVVNVTKQQVIQDLVSDCKIENNYRVIGLG--SD 298 Query: 258 YWFCDLKNLSISSLL 272 W + + +S L Sbjct: 299 GWLKKVMSSITNSPL 313 >gi|254796774|ref|YP_003081610.1| signal peptide peptidase SppA, 36K type [Neorickettsia risticii str. Illinois] gi|254589965|gb|ACT69327.1| signal peptide peptidase SppA, 36K type [Neorickettsia risticii str. Illinois] Length = 308 Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 5/289 (1%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRD 63 K+ T V+ L+ ++ F ++P++ R+ G I+ + + + Sbjct: 19 TFWKVVTFIVIGVLLVVSGSSFRGGLFDSFSAPYIGRVVFSGIIDQDLVRNSQFASFADN 78 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 A+I+ + S GG A A EA++ A++ V KPV+ + M AS Y+++ A+ IVA Sbjct: 79 PKIKAVILHVDSGGGGAAASEALYNAVRSVSLVKPVVVVANGMMASGAYMVAMAAEHIVA 138 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +S+VGSIG++ Q P K+G+ + V+S +KA PS E +A M+ + Sbjct: 139 YNSSIVGSIGMILQAPNFHEIGKKVGIKMDVVRSGRLKAFPSILEEFTKEARSSMEHSIS 198 Query: 184 SSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 + F+ +V E R I + + ++ G+I+TG EA + L+D +G + + L +G+ Sbjct: 199 VANEHFLSMVQERRKITDARVMSEIATGKIFTGKEALEFALVDEIGDETNAVRWLKEMGI 258 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 IR + + + + + S S+L + + GL AV+ Sbjct: 259 TGKIRDL-GFVSGRGFRVDKISPSSYLSVLNEFFRYLYS---PGLLAVF 303 >gi|261856483|ref|YP_003263766.1| peptidase S49 domain protein [Halothiobacillus neapolitanus c2] gi|261836952|gb|ACX96719.1| Peptidase S49 domain protein [Halothiobacillus neapolitanus c2] Length = 347 Score = 181 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 9/227 (3%) Query: 37 HVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + G + SQ E + I ++R ++V L S GG A + Sbjct: 93 RTFVLRFSGDLRASQVGALREEVSSILSVAR-PETDEVLVCLESGGGLVTAYGLAAAQLA 151 Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++ ++ IVAA ++VGSIGV+ Q P + L V Sbjct: 152 RLRAAGLHLTVAVDKVAASGGYMMAAVAHRIVAAPFAIVGSIGVVAQIPNIHRLLKNHDV 211 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 I+ + + K + E P+ + Q ++ ++ F + E R P ++ G Sbjct: 212 DIELLTAGQYKRTLTLLGENTPEGREKFQSQLNETHELFKSFLLEYR--PSLDLSKVATG 269 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 W G +A +GL+D + +E + +A +RK+ N K Sbjct: 270 EYWFGTQAMTLGLVDELTTSDEWIERQFAERAVIEVRKMPATNMLKK 316 >gi|331650031|ref|ZP_08351104.1| head-tail preconnector protein GP5 [Escherichia coli M605] gi|331040976|gb|EGI13133.1| head-tail preconnector protein GP5 [Escherichia coli M605] Length = 501 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D S +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVTCLQQAMADTSVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++MA SA L++ A + + +T+ GSIGV+ + + Sbjct: 138 DCADMIYRLREQKPVWALCNDMACSAAMLLAAACSRRLITQTAKTGSIGVMMAHTSYEKQ 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D + F V+ + D Sbjct: 198 LAQDGVDITLIYSGQRKVDGNSIQALPAGVRADFQQRIDEARRMFAEKVAIYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + GL D + + + A Sbjct: 258 ME-TEAAVFDGQSGIEAGLADELINASDAIDVMAA 291 >gi|307317075|ref|ZP_07596516.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306897163|gb|EFN27908.1| peptidase S49 [Sinorhizobium meliloti AK83] Length = 440 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 2/196 (1%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 + ER D + + + + SPGG + + ++ KPV E A SA Y I Sbjct: 105 KAFERGLADGNVRGIALIIDSPGGEVAGNFDLVDKMFAHRDEKPVRAYAMESAYSAAYSI 164 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + ++ I + T VGSIGV+ + +D++G + + + K + +P+ ++P+ Sbjct: 165 ASVADSITVSRTGGVGSIGVVTAHVDASKMVDEMGWKVTFIFAGKHKVDGNPYEALSPEV 224 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 +Q +D Y FV V+ +R + ++ +T ++A GL D +G ++ Sbjct: 225 KARIQARIDELYSVFVSTVARNRGMDEKAVRD-TEALTFTASQATSNGLADHIGTLDDSV 283 Query: 235 QS-LYALGVDQSIRKI 249 + L +D+ + Sbjct: 284 AAFAAELSLDEEDETM 299 >gi|329570276|gb|EGG52014.1| signal peptide peptidase SppA [Enterococcus faecalis TX1467] Length = 184 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 2/171 (1%) Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I+K+ P+ T AAS GY IS S+ I A E + GSIGV+ L+K Sbjct: 2 AKIKKL--DIPIYTAFKNTAASGGYYISAGSDKIFATEETTTGSIGVIISGLNYSGLLEK 59 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 LGVS + KS +K SP + + + +++Q+ V S+Y FV +V++ RN+ + L Sbjct: 60 LGVSDATYKSGELKDMMSPQHKPSEEEKKVIQEFVMSAYDRFVNIVAKGRNMDTNAVKEL 119 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 +DGRI+ G +A + GL+D +G E+ SL I+ N ++ Sbjct: 120 ADGRIYDGNQAVENGLVDQIGYSEDALDSLKKEKKLTDATVIEYKNDTTSF 170 >gi|307109943|gb|EFN58180.1| hypothetical protein CHLNCDRAFT_142011 [Chlorella variabilis] Length = 479 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 4/166 (2%) Query: 78 GSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS E IF I+++ PV T ++AAS GY + CA + A ETSLVGS+GV+ Sbjct: 216 GSPVQSELIFGLIRRLSKSTGIPVYTFAEDVAASGGYWLMCAGDKSYALETSLVGSVGVI 275 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 KLGV + + K + PF V P ++D++D + F V Sbjct: 276 SATFGATEAAKKLGVERRVFTAGEAKMQLDPFLPVQPDQEARLRDIMDDLHQAFKERVRG 335 Query: 196 SRNIPYD--KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 SR + L GR WTG +A K+GL+D +G V Q + Sbjct: 336 SRGERLAAGRDDELFSGRAWTGRQALKLGLVDGLGDMRSVMQEQFG 381 >gi|171913618|ref|ZP_02929088.1| signal peptide peptidase SppA, 36K type [Verrucomicrobium spinosum DSM 4136] Length = 276 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%) Query: 37 HVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 +VA I I G I+ D + + E +++ D + T +++ + SPGG Sbjct: 62 NVAIIRIDGVIDKRLAALEAECFGGVDLEVIDEALQQAEHDRAVTHVVLDIHSPGGGVTG 121 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I ++ K V V+ A SA Y ++ +++I AA +S +GSIGV Sbjct: 122 TPETAARIARLAQTKEVHAFVNCQACSAAYWLASQADVIAAAPSSCIGSIGVYMALLDET 181 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+ G ++ +K+ KA + F ++ + + Q VDS Y F + V+ SR I Sbjct: 182 RALEMEGYTVNLIKAGKHKAMGASFQKLTDEERAIFQGQVDSIYADFKKAVTASRRI--- 238 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVV 227 G+ + G A K+GL+DV+ Sbjct: 239 -ADSTMQGQSFDGKTALKLGLVDVL 262 >gi|313116931|ref|YP_004038055.1| ClpP class periplasmic serine protease [Halogeometricum borinquense DSM 11551] gi|312294883|gb|ADQ68919.1| ClpP class periplasmic serine protease [Halogeometricum borinquense DSM 11551] Length = 304 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 18/258 (6%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISR 62 ++ ++ L+ V + VA + + G I + + E+I+ + + Sbjct: 9 FGRVLLVVGVIGLLVGAAVAPNVWERATGPDGTVAVVEMHGTITGDSATEVIDNLREARQ 68 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 +DS A+++ ++SPGG+A A E ++ A+++ + PV+ V MAAS GY ++ ++ + Sbjct: 69 NDSIRAVVLDINSPGGAASASEQLYLAVKRTQQEMPVVVSVTGMAASGGYYMTAPADEVY 128 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 S VGS+GV P + + + P K S +E ++ V Sbjct: 129 VTPASTVGSVGVRAVVPGSQAP-------SGEILTGPDKGSTSTNAE--------VRRRV 173 Query: 183 DSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ FV V E R+ LS ++++GA K+GL D +GG + Q Sbjct: 174 EALRRAFVGSVMEERSESLKLTEEELSYAKVYSGARGVKLGLADSIGGIDTAIQGAADRA 233 Query: 242 VDQSIRKIKDWNPPKNYW 259 ++ +P +N Sbjct: 234 GLSDYAIVRMESPKQNPL 251 >gi|170020107|ref|YP_001725061.1| peptidase S49 [Escherichia coli ATCC 8739] gi|169755035|gb|ACA77734.1| peptidase S49 [Escherichia coli ATCC 8739] Length = 439 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 107/257 (41%), Gaps = 15/257 (5%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 L ++ +++G E GL D + + + +D ++ K + Sbjct: 262 LD-TEAAVYSGQEVIDAGLADELVNSTDAITVMRD-ALDARKSRLSGGRMTKETQSTTVS 319 Query: 265 NLSISSLLEDTIPLMKQ 281 + + + D +P + Sbjct: 320 ATASQADVTDVVPATEG 336 >gi|170080914|ref|YP_001730234.1| head protein [Escherichia coli str. K-12 substr. DH10B] gi|169888749|gb|ACB02456.1| head protein [Escherichia coli str. K-12 substr. DH10B] gi|312019774|emb|CBH95056.1| gpC [Enterobacteria phage phi80] Length = 447 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 21/222 (9%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ D +++ + +PGG Sbjct: 84 IAVLPVSGTLVSKTRALQPYSGMTGYNGIIARLQQAISDPGVDGILLDMDTPGGMVSGAF 143 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++++ KP+ ++M SAG LI+ +++ + +T+ GSIGV+ + Sbjct: 144 DCADIIARMRDIKPIWALANDMNCSAGQLIASSASRRLVTQTARTGSIGVMMAHSNYGAA 203 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L GV + + S K + +P+ ++ Q +D++ F VS + Sbjct: 204 LKTNGVEVTLIYSGDRKVDGNPYEKLPKDVRADFQTRIDATRQMFAEKVSAYTGMSVQDV 263 Query: 205 LVLSDGRIWTGAEAKKVGLIDV-------VGGQEEVWQSLYA 239 L ++ +++G E+ GL D +G E Sbjct: 264 LD-TEAAVFSGQESLDNGLADELVNNTDALGVMREALDRRKK 304 >gi|312968745|ref|ZP_07782953.1| putative head-tail preconnector protein [Escherichia coli 2362-75] gi|312286598|gb|EFR14510.1| putative head-tail preconnector protein [Escherichia coli 2362-75] Length = 501 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 86/214 (40%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSI V+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIDVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMFTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 ++ ++ G GL D + + + Sbjct: 258 TG-TEAAVFEGQSGIDAGLADELVNASDAISVMA 290 >gi|304311309|ref|YP_003810907.1| Peptidase family S49 [gamma proteobacterium HdN1] gi|301797042|emb|CBL45255.1| Peptidase family S49 [gamma proteobacterium HdN1] Length = 344 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 11/222 (4%) Query: 35 SPHVARIAIRGQI--EDSQELIERIERI--SRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 V + G + E + L + I I +++ L SPGG + + Sbjct: 93 RKRVYVLDFNGDVRAEGVESLRQEITAILTFATPE-DEVVMRLESPGGQVHMYGFAASQL 151 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +++K R P+ V ++AAS GY+++C +N I+AA ++VGSIGV+ + P L +L Sbjct: 152 ERLKTRNIPLTVCVDKVAASGGYMMACVANRIIAAPFAIVGSIGVVAELPNFNRVLKRLD 211 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + K + E + ++ ++ + F LV R P ++ Sbjct: 212 IDYDVYTAGEFKRTVTMMGENTADGIAKFKEELEDTQVLFKALVHRHR--PQLAIDGVAT 269 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 G W G+ A LID +G ++ L+ L + I +IK Sbjct: 270 GEHWYGSSALSNALIDELGTSDD---YLFDLSKNADIFEIKY 308 >gi|17545577|ref|NP_518979.1| bacteriophage-like protein [Ralstonia solanacearum GMI1000] gi|17427870|emb|CAD14560.1| probable bacteriophage-related protein [Ralstonia solanacearum GMI1000] Length = 416 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 14/216 (6%) Query: 37 HVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I I G + + E+++ D A+++ + SPGG + Sbjct: 58 QIAVIPIHGTLVRRTVGLEAESGLASYTAIGEQLDAALADPGIAAILLDVDSPGGESGGV 117 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ KPV ++MA SA Y ++CA++ + + T VGSIGV+ + Sbjct: 118 FDLADRIRVAAAIKPVWAAANDMAFSAAYALACAASRVFVSRTGGVGSIGVIAMHVDQSV 177 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K GV +V + K + +P + +A +Q V Y FV V R + + Sbjct: 178 KDAKDGVRYTAVFAGARKNDLNPHEPITDEAQAQLQAEVSRIYRLFVATVGSYRGLSAEA 237 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G +A GL D VG ++ L A Sbjct: 238 VTA-TEAGLFFGQDAVAAGLADAVGTFDDALAQLTA 272 >gi|331233637|ref|XP_003329479.1| protease IV [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308469|gb|EFP85060.1| protease IV [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 563 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 9/187 (4%) Query: 37 HVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 +V + + G I D + +++ + + DDS A+++ + S GG + I+ A++ Sbjct: 120 NVGVVYVLGTIGDMGEFGTSAIVKGLHEAADDDSIGAVVLRIDSGGGGVVESDTIWGAVK 179 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV-KPFLDKLG 149 +K + K VI AAS GYLI+ ++ I A+++++ GSIGV P V FLD+L Sbjct: 180 ALKAKGKVVIASFGNAAASGGYLIATHADSIFASQSTITGSIGVASLRPTVTTSFLDRLK 239 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 ++ +S + S + E+ + ++ + +DS+YH F V E RNI + VL+ Sbjct: 240 LTTQSFFTGSNA--LSLYHELEGEQMERHKAHIDSAYHDFKERVCEGRNISPELIEVLAG 297 Query: 210 GRIWTGA 216 GR++TG Sbjct: 298 GRVYTGQ 304 >gi|325914610|ref|ZP_08176951.1| ClpP class periplasmic serine protease [Xanthomonas vesicatoria ATCC 35937] gi|325539112|gb|EGD10767.1| ClpP class periplasmic serine protease [Xanthomonas vesicatoria ATCC 35937] Length = 331 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 15/266 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 W + + VA I I G I + +I IE+ R + T +++ + SPGGS Sbjct: 74 WGLNADPVRDSVALITINGGIGEMGKASATSVIPLIEQACRAERVTEVVLLIDSPGGSPT 133 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + I A++ K K PVI+ + M ASA Y+I+ ++ I A+ SLVGSIG + +Y Sbjct: 134 DADRIVSALKICKAAKRPVISVIGSMGASAAYMIAMHTDRIYASRYSLVGSIGAITRYVD 193 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +LG+ + KS +K PS S +P+ ++M ++V F + +R Sbjct: 194 ASGLAQRLGLVEQVYKSGQLKGGPSTLSGSSPEDSKLMAELVVQVASEFYGQLQAARGPR 253 Query: 201 YDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + L GRIWT +A +GL+D + E++ + + + + Sbjct: 254 LKGSREDLMSGRIWTAQDAVALGLVDEIAVLEDLKLTRFKDK--------RIYQYRAKSS 305 Query: 260 FCDLKNLSISSLLEDTIPLMKQTKVQ 285 F L+ ++ + KQ ++ Sbjct: 306 FMTDMGLTAEAVSRSFVAGAKQGVIE 331 >gi|2499884|sp|Q48513|PFAP_LEPBO RecName: Full=Putative peptidase pfaP; AltName: Full=PF-associated peptidase; AltName: Full=Periplasmic flagella-associated protein; Flags: Precursor gi|440320|gb|AAA79884.1| hypothetical peptidase [Leptospira borgpetersenii] Length = 204 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 2/179 (1%) Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 +++ + ++ + +MAAS GY I+ +++ I A ++ GSIGVL Q+ + LGV Sbjct: 2 RLRKTRKIVVSMKDMAASGGYYIASSADKIFALSGTITGSIGVL-QWLRYQRAFGSLGVK 60 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 +++ K K S F + P+ +M+Q ++ +Y+ FV+ V++ RN L++GR Sbjct: 61 MRTYKEGKYKDSLSLFRDSTPEEDEMIQKMLSDTYNEFVQDVAKGRNQTVKSVQNLAEGR 120 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 I++G +A + L+D +GG++E + L L D I ++ P + F L + S Sbjct: 121 IYSGQDAFRNKLVDEIGGRKEALEELSRLCQYDGEIPLYEEEESPFDRLFMMLGSKMNS 179 >gi|193062745|ref|ZP_03043839.1| head-tail preconnector protein GP5 [Escherichia coli E22] gi|192931867|gb|EDV84467.1| head-tail preconnector protein GP5 [Escherichia coli E22] Length = 538 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 14/224 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + L R++ D +++ + SPGG A Sbjct: 78 IAILPVSGTLVHKLGTLRPYSGMTGYDGLTARLQMAVNDPDVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++MA SA L++ A + +T+ +GSIGV+ + + Sbjct: 138 DCADMIYRLREQKPVWALCNDMACSAAMLLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQ 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D + FV V+ + + Sbjct: 198 LAQEGVDITLIYSGQHKVDGNSIQALPAGVRADFQRRIDEARRMFVDKVALYTGLSSEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + ++ ++ G GL D + + + + + D ++ Sbjct: 258 MN-TEAAVYDGQAGIDAGLADQLINAADAVEVMVSALNDSVTKE 300 >gi|186471872|ref|YP_001863190.1| peptidase S49 [Burkholderia phymatum STM815] gi|184198181|gb|ACC76144.1| peptidase S49 [Burkholderia phymatum STM815] Length = 311 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 2/202 (0%) Query: 40 RIAIRGQ-IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I G + + + DDS +++ + SPGGS Y + + I K + +K Sbjct: 84 VEDISGSGLMSIARFTQALRAAVADDSIGGVLIDVDSPGGSVYGVQELGDEIYKARGQKL 143 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 ++ + +AASA + I ++ GSIGV + L+K GV + + Sbjct: 144 IVACANSLAASAAFWIGSSAGEFYVTPGGEAGSIGVFAAHENWAAALEKAGVEATLISAG 203 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAE 217 K E +P+ ++ +A MQ VDS Y F R V+ +R + +GR+ +E Sbjct: 204 KYKTEGNPYGPLSEEARTFMQSRVDSYYGAFTRAVARNRGTDVATVRGGMGEGRVLGASE 263 Query: 218 AKKVGLIDVVGGQEEVWQSLYA 239 AK ++D V ++V + Sbjct: 264 AKAANMVDDVATFDQVLGRMAK 285 >gi|293414565|ref|ZP_06657214.1| phage capsid assembly protein [Escherichia coli B185] gi|291434623|gb|EFF07596.1| phage capsid assembly protein [Escherichia coli B185] Length = 538 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 14/224 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + L R++ D +++ + SPGG A Sbjct: 78 IAILPVSGTLVHKLGTLRPYSGMTGYDGLTARLQMAVNDPDVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++MA SA L++ A + +T+ +GSIGV+ + + Sbjct: 138 DCADMIYRLREQKPVWALCNDMACSAAMLLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQ 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D + FV V+ + + Sbjct: 198 LAQEGVDITLIYSGQHKVDGNSIQALPAGVRADFQRRIDEARRMFVDKVALYTGLSSEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + ++ ++ G GL D + + + + + D ++ Sbjct: 258 MN-TEAAVYDGQAGIDAGLADQLINAADAVEVMVSALNDSVTKE 300 >gi|320660180|gb|EFX27694.1| putative phage minor capsid protein [Escherichia coli O55:H7 str. USDA 5905] Length = 439 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 82 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 142 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+K GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 202 LEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRIFAQKVSAYTGLSVQAV 261 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 L ++ +++G EA GL D + + Sbjct: 262 LD-TEAAVYSGQEAIDAGLADELVNSTDAI 290 >gi|323185713|gb|EFZ71074.1| head-tail preconnector protein GP5 [Escherichia coli 1357] Length = 538 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 86/219 (39%), Gaps = 14/219 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + L R++ D +++ + SPGG A Sbjct: 78 IAILPVSGTLVHKMGTLRPYSGMTGYDGLTARLKSAVNDPDVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++MA SA L++ A + +T+ +GSIGV+ + + Sbjct: 138 DCADMIYRLREQKPVWALCNDMACSAAMLLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQ 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D + FV V+ + + Sbjct: 198 LAQEGVDITLIYSGQHKVDGNSIQALPTGVRADFQRRIDEARRMFVDKVALYTGLSSEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + ++ ++ G GL D + + + + D Sbjct: 258 MN-TEATVYDGQAGIDTGLADQLINAADAVDVMVSALND 295 >gi|91975697|ref|YP_568356.1| peptidase S49 [Rhodopseudomonas palustris BisB5] gi|91682153|gb|ABE38455.1| peptidase S49 [Rhodopseudomonas palustris BisB5] Length = 299 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 19/270 (7%) Query: 36 PHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 P V + + G I L +ER +A A+ ++++SPGGS I Sbjct: 30 PVVPVVRLSGVIGAVTPLRPGMTLAGVARLLERAFATRNAKAVALAINSPGGSPVQSRLI 89 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + K PVI V ++AAS GY+I+CA++ I +S+VGSIGV+ + Sbjct: 90 YLRIRALAAEKKLPVIAFVEDVAASGGYMIACAADEIYCDPSSIVGSIGVVGGGFGFQEM 149 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-K 203 + K+GV + + KA+ PF +P V ++ + + F+ LV +SR Sbjct: 150 IKKIGVERRLYTAGDHKAQLDPFLPEDPADVARVKALQREIHALFISLVKDSRGARLKGA 209 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 VL G W GA + +GL D +G V ++ + V + PP + Sbjct: 210 EDVLFSGEYWAGATSVSLGLSDAIGDLRAVLRARFGDKVRTPVVA-----PPSGLLASFM 264 Query: 264 KNLSISSLLEDTIPLMKQTKVQGL--WAVW 291 + S + D + + ++ + L A+W Sbjct: 265 RRSSGAEASLDGLAALPESLISALETRAIW 294 >gi|319764217|ref|YP_004128154.1| peptidase s49 [Alicycliphilus denitrificans BC] gi|317118778|gb|ADV01267.1| peptidase S49 [Alicycliphilus denitrificans BC] Length = 451 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 1/190 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +L +E + A+++ SPGG A + + ++ RKP+ MAASA Sbjct: 105 NDLAADLEDAMANPEVHAVLLVYDSPGGEAQGAFEYAQRVHAMRGRKPLWAISDGMAASA 164 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 YL A+ T + GSIGV+ ++ + LD G+++ + + K + +P+ + Sbjct: 165 AYLGGSAAEQFAITSTGIAGSIGVVARHVDLSRALDAEGITVTHIFAGSHKVDGNPYEPL 224 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 + Q +D+ Y F+ V+ R I + +TG A L D + Sbjct: 225 PESVRKDWQAEIDNLYGMFIDAVATHRGIDVRAVRA-TQAATYTGQAAVDARLADRIATT 283 Query: 231 EEVWQSLYAL 240 + + L AL Sbjct: 284 DSLIAELAAL 293 >gi|300918442|ref|ZP_07135040.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] gi|300414417|gb|EFJ97727.1| putative signal peptide peptidase SppA [Escherichia coli MS 115-1] Length = 445 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 89/220 (40%), Gaps = 21/220 (9%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ D +++ + +PGG Sbjct: 84 IAVLPVSGTLVSKTRSLQPYSGMTGYNGIIARLQQAISDPGVDGILLDMDTPGGMVAGAF 143 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++++ KP+ ++M SAG LI+ A++ + +T+ GSIGV+ + Sbjct: 144 DCADIIARMRDIKPIWALANDMNCSAGQLIASAASRRLVTQTARTGSIGVMMAHSNYGAA 203 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L GV + + S K + +P+ ++ + Q +D++ F V+ + Sbjct: 204 LKTSGVEVTLIYSGDHKVDGNPYEKLPKEVRADFQARIDATRQMFAEKVAGYTGMSVQAV 263 Query: 205 LVLSDGRIWTGAEAKKVGLI-------DVVGGQEEVWQSL 237 L ++ +++G E+ GL D + + Sbjct: 264 LD-TEAAVFSGQESVDNGLAEQLVNNMDALNVMRDAINKR 302 >gi|313847682|emb|CBY16670.1| putative exported protease [Chlamydophila psittaci RD1] Length = 335 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 12/222 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + ++P +A + ++ I S Q+ I ++ D +I+ + PGG + Sbjct: 58 DIGKDAPIIAVLEMKDVIASSKHTAKIIQDAITTLDSAPYKDRVKGIIIDMDCPGGEVFE 117 Query: 83 GEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 ++ IQ K + + PV V+ + AS GY ++CA++ I + +SL+GS+GVL Y Sbjct: 118 ISRVYSIIQFWKQRTQCPVYVFVNGLCASGGYYVACAADKIYSTSSSLIGSVGVLSGPYF 177 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +P++E K ++ Q+++D Y FV +V +R Sbjct: 178 NVKEGLSRYGVQSDLLIAGKDKAPMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPR 237 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYA 239 + DK + + R+++ +A + G IDV +++V Q L A Sbjct: 238 LTKDKLVSVLGARLYSPEKALEEGYIDVANVTKQQVLQDLVA 279 >gi|91224322|ref|ZP_01259584.1| Putative capsid protein of prophage [Vibrio alginolyticus 12G01] gi|91190664|gb|EAS76931.1| Putative capsid protein of prophage [Vibrio alginolyticus 12G01] Length = 450 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 94/215 (43%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + ++ R+ D A+++ +++PGG Sbjct: 76 IAIIPIDGSLVHKYGHIKPYSGMTGYDGIMHRLREAVADPEVKAILLDMNTPGGMVAGCF 135 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I +++ KP+ + ++M SAG +I+ A + + +T + GS+GV+ + ++ Sbjct: 136 DLADKIAEMRKIKPIWSLGYDMHCSAGQMIASACSRRLITQTGIAGSVGVIMAHTNIEKM 195 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ GV I V + KA+ +P+ + + + Q +S+ F +E + Sbjct: 196 LDQQGVEITLVTAGDHKADGNPYQSLPKEVREKWQSEAESTRQMFAGKAAEYMGVDIKTI 255 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++ +++ G A VG + V + Q + Sbjct: 256 LS-TEAQVYEGQAAVDVGFANEVVNGLDAVQIMAE 289 >gi|153834991|ref|ZP_01987658.1| minor capsid protein C (GPC) [Vibrio harveyi HY01] gi|148868565|gb|EDL67658.1| minor capsid protein C (GPC) [Vibrio harveyi HY01] Length = 450 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 94/215 (43%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + ++ R+ D A+++ +++PGG Sbjct: 76 IAIIPIDGSLVHKYGHIKPYSGMTGYDGIMHRLREAVADPEVKAILLDMNTPGGMVAGCF 135 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I +++ KP+ + ++M SAG +I+ A + + +T + GS+GV+ + ++ Sbjct: 136 DLADKIAEMRKIKPIWSLGYDMHCSAGQMIASACSRRLITQTGIAGSVGVIMAHTNIEKM 195 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ GV I V + KA+ +P+ + + + Q +S+ F +E + Sbjct: 196 LDQQGVEITLVTAGDHKADGNPYQSLPKEVREKWQSEAESTRQMFAGKAAEYMGVDIKTI 255 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++ +++ G A VG + V + Q + Sbjct: 256 LS-TEAQVYEGQAAVDVGFANEVVNGLDAVQIMAE 289 >gi|299469968|emb|CBN79145.1| signal peptide peptidase [Ectocarpus siliculosus] Length = 915 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 15/213 (7%) Query: 37 HVARIAIRGQIEDSQE---------LIERIERIS----RDDSATALIVSLSSPGGSAYAG 83 +A + +G I +S +I ++ D S ++V +SSPGG A A Sbjct: 464 TIAVLNAQGAIVNSAAPSPGGAINLVISNFRDMASTIIADKSIDGVVVRVSSPGGDASAS 523 Query: 84 EAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + ++R +++++ K V+ V ++AAS GY I+ IV E S+ GSIGV+ + Sbjct: 524 DLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIG 583 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L+K+G++ + + S + +SY+ FV ++SR +P + Sbjct: 584 ELLEKIGITSELISKGKYAELFSA-RSFTAEEDAYFGRGAMASYNDFVGKAAKSRRMPLE 642 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + GR+WTGAEAK++GL+D +GG ++ + Sbjct: 643 DMQRRAQGRVWTGAEAKELGLVDDLGGLDKAIE 675 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 15/166 (9%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV-KNRKPVITEVHE------ 105 L++ ++ + D A+++ P S A + RA+ ++ KP+ Sbjct: 215 LVKTLKTAAHDPRIKAVVIDFDGPALSMAATMEVRRAMDYFTQSGKPLWGFTESSVDLTL 274 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 + G +A E + IG + + + L+ GV + K Sbjct: 275 LCLMGG------CTRRIATEEAYCNVIGFSSEAQFFRKALENFGVEPAVKRIGEFKTFGD 328 Query: 166 PFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +S ++ ++ +++++ + L++ S + L D Sbjct: 329 AYSRDSMSAAQREVSTNLLETVSGFKTGLLARSSGKSVAEVEALYD 374 >gi|329942445|ref|ZP_08291255.1| peptidase S49 family protein [Chlamydophila psittaci Cal10] gi|332287086|ref|YP_004421987.1| putative exported protease [Chlamydophila psittaci 6BC] gi|325506439|gb|ADZ18077.1| putative exported protease [Chlamydophila psittaci 6BC] gi|328815355|gb|EGF85343.1| peptidase S49 family protein [Chlamydophila psittaci Cal10] gi|328914320|gb|AEB55153.1| peptidase, U7 family protein, putative [Chlamydophila psittaci 6BC] Length = 333 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 12/222 (5%) Query: 30 HVEDNSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + ++P +A + ++ I S Q+ I ++ D +I+ + PGG + Sbjct: 56 DIGKDAPIIAVLEMKDVIASSKHTAKIIQDAITTLDSAPYKDRVKGIIIDMDCPGGEVFE 115 Query: 83 GEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YP 139 ++ IQ K + + PV V+ + AS GY ++CA++ I + +SL+GS+GVL Y Sbjct: 116 ISRVYSIIQFWKQRTQCPVYVFVNGLCASGGYYVACAADKIYSTSSSLIGSVGVLSGPYF 175 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-N 198 VK L + GV + + KA +P++E K ++ Q+++D Y FV +V +R Sbjct: 176 NVKEGLSRYGVQSDLLIAGKDKAPMNPYTEWTAKDREIRQEIIDYLYGQFVDVVVTNRPR 235 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYA 239 + DK + + R+++ +A + G IDV +++V Q L A Sbjct: 236 LTKDKLVSVLGARLYSPEKALEEGYIDVANVTKQQVLQDLVA 277 >gi|282891036|ref|ZP_06299541.1| hypothetical protein pah_c045o044 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499029|gb|EFB41343.1| hypothetical protein pah_c045o044 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 344 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 129/284 (45%), Gaps = 22/284 (7%) Query: 29 SHVEDNSPHVARIAIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSA 80 + + +P V + I G I Q+LIE E ++ A+ + +++PGG+ Sbjct: 61 TALSSTAPVVLVLPIDGLIGGESLNAKTVRQQLIESREGTLSNNRVKAIFLEINTPGGTV 120 Query: 81 YAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQ 137 + + I+R+++ K PV V + AS G ++ A++ + A++ SLVGS+GV+ Sbjct: 121 FDADGIYRSLKAYKKEFDVPVFAYVDGLCASGGMYVASAADKVYASDVSLVGSVGVITSS 180 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 Y + LDK+GV ++ + K E +P P MQ +++ Y FV +V+ +R Sbjct: 181 YLNLSQLLDKIGVQSLTLSAGKGKDELNPLRPWKPGEQDKMQGLINFYYQHFVGVVTANR 240 Query: 198 N-IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE-EVWQSLYA-LGVDQSIRKIKDWNP 254 + +K + ++ EA G ID G E ++L +G++ ++ + Sbjct: 241 PQLNKEKLVDEYGASVFPADEAFAKGYIDGSGFSRGEALKALLKQIGIEDDFYQVMKFQG 300 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL-----WAVWNP 293 WF + + ++L +I L ++ +++P Sbjct: 301 K--NWFSQIFS-ETNALASGSIQLRLPQELDAKFSNQPLYLYHP 341 >gi|86139851|ref|ZP_01058417.1| Peptidase U7 [Roseobacter sp. MED193] gi|85823480|gb|EAQ43689.1| Peptidase U7 [Roseobacter sp. MED193] Length = 472 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 14/204 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + +IE +RD S A+ + + S GG Sbjct: 82 IAVIEISGVLIHRGGWIGQSSGQTSYEGIAAQIEAAARDASVRAVALEIDSFGGEVAGVF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++ ++ KPV + E A SAGY ++ ++ I+ T VGSIGV+ + + Sbjct: 142 DLADQVRALRRDKPVWAFIAEHAFSAGYALASQADRILLPRTGTVGSIGVVVMHADLSGQ 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ GV + + S K + +P+ + +Q +D F V+ R+ + Sbjct: 202 LDQDGVRVTMIHSGQHKVDGNPYEPLPESVRDDIQREIDVLRFLFAETVAAGRSGLLSQD 261 Query: 205 LVLSD-GRIWTGAEAKKVGLIDVV 227 L+ + G++A GL D V Sbjct: 262 AALATEATTYRGSDAVAAGLADEV 285 >gi|254454366|ref|ZP_05067803.1| peptidase U7 [Octadecabacter antarcticus 238] gi|198268772|gb|EDY93042.1| peptidase U7 [Octadecabacter antarcticus 238] Length = 479 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 14/203 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + +I+ D + + + + S GG Sbjct: 83 IAVIEISGVLIHRGGWIGQSSGQTSYEGIAAQIDAAGNDPAVRGIALEIDSFGGEVAGVF 142 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ ++ KPV + V E A SAGY ++ ++ I+ T VGSIGV+ + + Sbjct: 143 DLADRIRAIRATKPVWSFVAEHAFSAGYALASQADRILLPRTGAVGSIGVVVMHADMSGQ 202 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ G+ + + S K + +P+S + +Q +D F V+ R + Sbjct: 203 LDQDGMRVTLIHSGEHKVDGNPYSPLPDGVRADIQGEIDVLRFLFAETVAAGRAGRLSQE 262 Query: 205 LVLSD-GRIWTGAEAKKVGLIDV 226 L+ + GA+A GL D Sbjct: 263 AALATKAATYRGADAVAAGLADE 285 >gi|110806591|ref|YP_690111.1| head-tail preconnector gp5 [Shigella flexneri 5 str. 8401] gi|110616139|gb|ABF04806.1| head-tail preconnector gp5 [Shigella flexneri 5 str. 8401] gi|333007221|gb|EGK26708.1| head-tail preconnector protein GP5 [Shigella flexneri K-218] Length = 501 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSPGGQATGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + K Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + L D + + + A Sbjct: 258 MG-TEAAVFEGQSGIEAELADELINASDAISVMAA 291 >gi|29839895|ref|NP_829001.1| protease IV, putative [Chlamydophila caviae GPIC] gi|29834242|gb|AAP04879.1| protease IV, putative [Chlamydophila caviae GPIC] Length = 332 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 29/292 (9%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVE---------------DNSPHVARIAIRGQIEDS-- 50 + V+ + L V S ++ +P +A + ++ I S Sbjct: 18 LSFGVVLAFSIILGFVALSSGGGIQFVNMPNAKGEIKDLGKEAPIIAVLEMKDVIASSRH 77 Query: 51 -----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEV 103 QE I ++ LI+ + PGG + ++ I+ K + PV V Sbjct: 78 TEKVIQEAIIALDSAPYKGRVKGLIIDMDCPGGEVFEIARVYSTIKFWKQCTKCPVYVFV 137 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ-YPYVKPFLDKLGVSIKSVKSSPMKA 162 + + AS GY ++CA++ I + +SL+GS+GVL Y VK L + GV + S KA Sbjct: 138 NGLCASGGYYVACAADKIYSTSSSLIGSVGVLSGPYFNVKEGLSRHGVQSDLLISGKDKA 197 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN-IPYDKTLVLSDGRIWTGAEAKKV 221 +P++E K ++ Q+++D Y FV +V +R + +K + + R+++ +A + Sbjct: 198 PMNPYTEWTAKDREIRQEIIDYLYGQFVDIVVTNRPLLTKEKLVGVLGARLYSPEKALET 257 Query: 222 GLIDVVG-GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 G IDVV +++V + L A ++ ++ + W + + +S L Sbjct: 258 GYIDVVNATKQQVLEDLVAACDIENNYRVIGLG--SDGWLKKFMSSAANSPL 307 >gi|332760042|gb|EGJ90342.1| head-tail preconnector protein GP5 [Shigella flexneri 4343-70] Length = 501 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSPGGQATGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + K Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + L D + + + A Sbjct: 258 MG-TEAAVFEGQSGIEAELADELINASDAISVMAA 291 >gi|168704191|ref|ZP_02736468.1| hypothetical protein GobsU_31944 [Gemmata obscuriglobus UQM 2246] Length = 304 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 102/252 (40%), Gaps = 30/252 (11%) Query: 31 VEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPG 77 V+ +P +A + + G I ++ E++E ++ D A A+++ ++SPG Sbjct: 53 VQGGAPRIALVDVDGLILNTPFVGPLSVGENPVALFREKLEAVACDPCAKAVVLRINSPG 112 Query: 78 GSAYAGEAIFRAIQ--KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G A A+ ++ K + R PV+ + + A Y ++ A++ IVA ++ G +GV+ Sbjct: 113 GGVAACIAMRHDLEQFKARTRLPVVACLMDTATGGAYYLASAADHIVAGPATVTGGLGVV 172 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 ++ + + V + +KS + + +++Q + D + Sbjct: 173 LNLFNLQDLMGMVNVRPQLIKSGERTDIGTSARRLTDGERELLQAMADEFRDRLAADIRR 232 Query: 196 SRNIPYDKTLV---------------LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 SR ++ DGRI T +AK L+D VG ++ Sbjct: 233 SRPGVVERLETPFEGSMFGWNLDRGRTFDGRILTAEQAKARNLVDAVGSLDDAISVAAPD 292 Query: 241 GVDQSIRKIKDW 252 GV + R W Sbjct: 293 GVPRRPRAGPAW 304 >gi|328849884|gb|EGF99057.1| putative protease IV sppA [Melampsora larici-populina 98AG31] Length = 842 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 100/189 (52%), Gaps = 9/189 (4%) Query: 37 HVARIAIRGQIEDSQE-----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 +V + + G I D E +++ ++ + DDS A+++ + S GG + I+ A++ Sbjct: 396 NVGVVYVLGTIGDVGEFGTGAIVKGLKEAAEDDSIGAVVLRIDSGGGGVVESDTIWGAVK 455 Query: 92 KVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP-FLDKLG 149 ++++R KPVI AAS GYLI+ ++ I A +++ GSIGV P + P F ++L Sbjct: 456 ELRSRGKPVIASFGNAAASGGYLIATHADSIFAMPSTITGSIGVASLRPTIMPSFFERLK 515 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 ++ +S + S + E+ +A+ + +D +Y F V + R I + L+ Sbjct: 516 LTTQSFFTGSQA--LSIYHELGDEAMSRHKTHIDLAYADFKGRVCDGRQISTELIEKLAG 573 Query: 210 GRIWTGAEA 218 GR++TG +A Sbjct: 574 GRVYTGLKA 582 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 84/215 (39%), Gaps = 32/215 (14%) Query: 52 ELIERIERISRDDSATALIVSLSS----------PGGSAYAGEAIFRAIQKVKNRK---- 97 + + ++ + DD LI +SS P G A E + A+ ++K K Sbjct: 128 DAVRTLQFVQADDRIIGLIADMSSTNAPTVSQNIPLGLA-QIEELQEALNELKAEKERRL 186 Query: 98 -----PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 I + A Y ++ + I + + +G+ + L+ LG+ + Sbjct: 187 GAGKFKTIAFTETFRSQAEYAMASGFDEIYCQPSGEIPLVGINSTVTFYSRLLNWLGIKV 246 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW--FVRLVSESRNIPYDKTLVLSDG 210 + + K+ +P +E + + ++ + + S F +SE R + L++ Sbjct: 247 HAEARTDYKSM-TPQAENHSELLEDLNRNMLSLIAMNRFRNELSEQRPRDPKEMGSLTE- 304 Query: 211 RIWT--------GAEAKKVGLIDVVGGQEEVWQSL 237 R+ T EA ++GLI +EE+++ + Sbjct: 305 RMKTYSKKGPLMAHEAIEMGLISGTTYKEELFEKV 339 >gi|212702705|ref|ZP_03310833.1| hypothetical protein DESPIG_00733 [Desulfovibrio piger ATCC 29098] gi|212673865|gb|EEB34348.1| hypothetical protein DESPIG_00733 [Desulfovibrio piger ATCC 29098] Length = 401 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 14/261 (5%) Query: 38 VARIAIRGQIEDSQE---------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 VA I+I G I + + + ++ +D+ +++S +SPGG A + + Sbjct: 48 VAVISITGVISRKESWWADVGQDGIRQALDEARQDERVRGILLSFNSPGGVAAGVKELAD 107 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + + KPV + ASA Y ++ A+ + A + VGS+GV+ + + FLDK+ Sbjct: 108 YIASI-DDKPVAAYADGLTASAAYWLASATGRVYAPAMAQVGSVGVISEVRNISGFLDKM 166 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GVSI + S K +P ++ P+ Q+ VD+ + F V++ I D + Sbjct: 167 GVSITYIASGKWKTAGNPVEKLTPEQTAYFQERVDALHTVFKADVAQHMGISQD--PAWT 224 Query: 209 DGRIWTGAEAKKVGLIDVV-GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + +I A+++GL+ + +++ L + + + ++ + L Sbjct: 225 EAQILFAQSAQQLGLVTAIVRDEDQAINRLLEVTMPDNSPDAPAQAMTRDRLAAEAPEL- 283 Query: 268 ISSLLEDTIPLMKQTKVQGLW 288 + +LLE+ V+ Sbjct: 284 LQALLEEGRDSASNDGVEYAL 304 >gi|299530356|ref|ZP_07043781.1| phage minor capsid protein C, putative [Comamonas testosteroni S44] gi|298721727|gb|EFI62659.1| phage minor capsid protein C, putative [Comamonas testosteroni S44] Length = 314 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 97/194 (50%), Gaps = 1/194 (0%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 + + + +++ DD+ + + + SPGGSA + I ++ KP+ V+ Sbjct: 95 TMTSYEGIRTQLQAALADDAVEHVALDVDSPGGSATGMTDLAEEIFAARSIKPITAIVNF 154 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 SA Y ++ A+N IV +++S VGSIGV+ ++ + ++ G+ + ++ + KA+ + Sbjct: 155 SCYSAAYGLASAANEIVLSKSSGVGSIGVIARHVDMSKRYEEQGIKVTTIFAGARKADLA 214 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + ++ +A Q + ++V +Y F LV+ +R + ++ ++ G + ++GL D Sbjct: 215 SDAPLSTEAAQWLNELVQQNYAEFTELVARNRGLTVAAVRG-TEAGVYFGGKGIELGLAD 273 Query: 226 VVGGQEEVWQSLYA 239 + + + A Sbjct: 274 RIEPPQAAINRIAA 287 >gi|207092958|ref|ZP_03240745.1| signal peptide protease IV [Helicobacter pylori HPKX_438_AG0C1] Length = 194 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 94/182 (51%), Gaps = 4/182 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERI 60 ++F+ K K+ ++L + +V+FS P++A++ + G I +++ + +++I Sbjct: 17 LDFITKYFKSFMLLL----IVLVFFSAKESTPSAPPNLAKLYLNGAIFSAEDFDKEVDKI 72 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + S +++ + SPGG+ A + I +K + PV+ + AS Y ++ Sbjct: 73 LKTPSIKGVLLLIDSPGGAVSASVELSEKIADLKQKMPVLAYARGVMASGSYYAGMQASE 132 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 + A++ SL+GSIGV+F V+ L+K+GV+ + V + K + P + +Q+ Sbjct: 133 VYASKASLIGSIGVIFSGANVENLLNKVGVATQGVHAGEYKEIGTFTRAWKPNEKEFLQN 192 Query: 181 VV 182 +V Sbjct: 193 LV 194 >gi|209918850|ref|YP_002292934.1| putative phage capsid assembly protein [Escherichia coli SE11] gi|209912109|dbj|BAG77183.1| putative phage capsid assembly protein [Escherichia coli SE11] Length = 499 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D S +++ + SPGG A Sbjct: 78 IAILPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMVDPSVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +EMA SA L++ A + +T+ +GSIGV+ + + Sbjct: 138 DCADMIYRLREKKPVWALCNEMACSAAMLLAAACTRRLVTQTAKIGSIGVMMAHTSYEKQ 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D + FV V+ + + Sbjct: 198 LAQEGVDITLIYSGKHKVDGNCIQALPAGVCADFQRRIDEARQMFVDKVALYTGMSSEAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G +GL D + + + A Sbjct: 258 MS-TEAAVYDGQAGIDIGLADELINASDAITVMDA 291 >gi|320654748|gb|EFX22727.1| putative head protein/prohead protease [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 184 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 1/180 (0%) Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + D +++ + SPGG A I +++ +KPV ++ A SA L++ A Sbjct: 1 QAMADSQVRGVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASAC 60 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + + +TS +GSIGV+ + L + GV I + S K + + F + + Q M Sbjct: 61 SRRLVTQTSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDM 120 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q +D++ F V+ + D ++ ++ G + GL D + + + Sbjct: 121 QQRIDAARRMFAEKVAMYTGLSVDAVTG-TEAAVFEGQSGIEAGLADELINASDAISVMA 179 >gi|46201147|ref|ZP_00055675.2| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 400 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 16/227 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLS 74 + + +A I + G + + ++ E IE + D + A+++ + Sbjct: 44 APDTQVTPDGIAIIPVMGSLVNRSSYLGAASGLSSYSDIGEDIEAAATDPNVRAILLDID 103 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG + IQ ++++ KP+ E A SA Y I C ++ +T VGS+ Sbjct: 104 SPGGEVGGLFDLVDQIQVIRSQCGKPIWAVADEAALSAAYAIGCVADRFYVTQTGEVGSV 163 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + G++ + + K + + ++ A +Q VD+ Y F+ L Sbjct: 164 GVVAVHLDESGADSQAGLTWSFIHAGAAKVDGNSHQPLSDTARATLQADVDALYTRFIDL 223 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V++ R D ++ ++ G +A +GL D VG L A Sbjct: 224 VAKCRKKAPDAIRA-TEANVYRGDQAVAMGLADKVGTLRVALADLGA 269 >gi|294636161|ref|ZP_06714581.1| head-tail preconnector protein GP5 [Edwardsiella tarda ATCC 23685] gi|291090527|gb|EFE23088.1| head-tail preconnector protein GP5 [Edwardsiella tarda ATCC 23685] Length = 498 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D + +++ + SPGG A Sbjct: 81 IAVLPVTGTLVHKLGAMRPFSGMTGYDGITARLQQAISDTAVRGILLDIDSPGGQAAGAF 140 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++ +KP+ ++MA SA LI+ A + +TS +GSIGVL + + Sbjct: 141 DCADMIARLGAQKPIWALCNDMACSAAMLIASACAKRLVTQTSTIGSIGVLMAHTSYEKQ 200 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + + Q +D++ F V+ + D Sbjct: 201 LAQQGVDITLIYSGAHKVDGNSTQALPDSVRADFQQRIDAARRLFAEKVAMFTGLSVDDV 260 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++G + VGL D + + + A Sbjct: 261 MA-TEAATYSGQASIDVGLADGMVNAADALDVMAA 294 >gi|156974266|ref|YP_001445173.1| hypothetical protein VIBHAR_01981 [Vibrio harveyi ATCC BAA-1116] gi|156525860|gb|ABU70946.1| hypothetical protein VIBHAR_01981 [Vibrio harveyi ATCC BAA-1116] Length = 450 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 94/215 (43%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + ++ R+ D A+++ +++PGG Sbjct: 76 IAIIPIDGSLVHKYGHIKPYSGMTGYDGIMHRLREAVADPEVKAMLLDMNTPGGMVAGCF 135 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I +++ KP+ + ++M SAG +I+ A + + +T + GS+GV+ + ++ Sbjct: 136 DLADKIAEMRKIKPIWSLGYDMHCSAGQMIASACSRRLITQTGIAGSVGVIMAHTNIEKM 195 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ GV I V + KA+ +P+ + + + Q +S+ F +E + Sbjct: 196 LDQQGVEITLVTAGDHKADGNPYQSLPREVREKWQSEAESTRQMFAGKAAEYMGVDIKTI 255 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L ++ +++ G A VG + V + Q + Sbjct: 256 LS-TEAQVYEGQAAVDVGFANEVVNGLDAVQIMTE 289 >gi|330818852|ref|YP_004351069.1| signal peptide peptidase SppA, 36K type [Burkholderia gladioli BSR3] gi|327374394|gb|AEA65746.1| signal peptide peptidase SppA, 36K type [Burkholderia gladioli BSR3] Length = 318 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 6/212 (2%) Query: 33 DNSPHVARIAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + P +A + + G + + ++ + D A+ + + S GGS E I Sbjct: 64 SHGPELAVVHLSGNVGTVSARADLVVPALREAFDSDKVRAIALMIDSGGGSPIDAERIDD 123 Query: 89 AIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 A+ +K + KPVI ++ + ASA YL++ S+ ++A SLVGSIG + + L Sbjct: 124 ALAALKKQHPKPVIAVINSLGASAAYLVAMHSDEVMAGRFSLVGSIGAVIESWDFSGALG 183 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 ++ V + S +KA +P+ P A Q +V+ F+ + +R K + Sbjct: 184 RVDVKQRVYASGALKAMLNPYIPATPAADDKAQALVNVLAGEFLGELERTRGAKLSKDVK 243 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 G +W G AK++GL+D VG E++ L Sbjct: 244 YDTGEVWDGEAAKRIGLVDTVGTIEDLQVRLQ 275 >gi|292492693|ref|YP_003528132.1| peptidase S49 domain protein [Nitrosococcus halophilus Nc4] gi|291581288|gb|ADE15745.1| Peptidase S49 domain protein [Nitrosococcus halophilus Nc4] Length = 325 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 97/217 (44%), Gaps = 12/217 (5%) Query: 37 HVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 + + G I + +E+ + + +D +++ L + GG + + Sbjct: 87 RIFVLDFHGDIRATAVASLREEITAVLSVATPEDE---VLLRLENGGGLVHEHGLAASQL 143 Query: 91 QKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 ++++ ++ P+ V +MAAS GY+++C N I+AA +++GSIG L Q P LDK G Sbjct: 144 ERIRKKQIPLTIAVDKMAASGGYMMACVGNRIIAAPFAVIGSIGALMQLPNFHRLLDKHG 203 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + +K+ +K + F + ++ + V+ + F ++ R P + Sbjct: 204 IDFEQIKAGELKRTVTLFGINTDRDRELAKKQVEDIHQLFKEFITHYR--PQVDLSQTAT 261 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 G+ W +A+++ LID + ++ + Sbjct: 262 GQHWHAIQAQELNLIDDLETSDDYLLEASKTADLYEV 298 >gi|3249702|gb|AAC24140.1| unknown [Enterobacteria phage Felix 01] Length = 442 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + + L + D+S +++ + S GG A + R I + +K +I V Sbjct: 84 GGLSSYEGLRRGFDEALADESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVD 143 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++ ++ I+A+ + VGSIGV+ + + +K GV+I +K+ K Sbjct: 144 EFACSAAYALASSAEEIIASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMG 203 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 SPF ++ ++ + +Q ++ +Y F V+ESRN+ + ++ +++ EA ++GLI Sbjct: 204 SPFQALSEESKERLQKRINDTYATFTGFVAESRNLSEEAVKN-TEANVYSAQEALELGLI 262 Query: 225 DVVGGQEEVWQSLYA 239 + + Q++ L Sbjct: 263 NSIMSQDDFLNYLQG 277 >gi|224014857|ref|XP_002297090.1| protease [Thalassiosira pseudonana CCMP1335] gi|220968209|gb|EED86558.1| protease [Thalassiosira pseudonana CCMP1335] Length = 217 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 10/215 (4%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 P++ G + SQ E + I R S+ +++ L S GG+ Sbjct: 1 RPNLFVTRFSGDVSASQVNDLREEVTGILRASQPGD--EVLMILQSGGGTVTGYGLSAAQ 58 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+ K + + V ++AAS GY++ C ++ IVA+ +++GSIGV+ P L + Sbjct: 59 LQRFKTKGLKLTICVEQVAASGGYMMCCTADRIVASPFAVLGSIGVISDIPNAYERLKQE 118 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ +++ + K +P +V + ++ ++ ++ F V R P ++ Sbjct: 119 GIEFQTITAGKYKRTVTPTKKVTKEDLKKSEEDINDILKLFKAFVKSQR--PQLDIENVA 176 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 G W G +A GL D + ++V G D Sbjct: 177 TGETWFGEDALAKGLCDEIATADDVLLEFVDNGYD 211 >gi|238801794|ref|YP_002922844.1| putative head maturation protease [Enterobacteria phage WV8] gi|216263007|gb|ACJ71875.1| putative head maturation protease [Enterobacteria phage WV8] Length = 448 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + + L + D+S +++ + S GG A + R I + +K +I V Sbjct: 84 GGLSSYEGLRRGFDEALADESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVD 143 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++ ++ I+A+ + VGSIGV+ + + +K GV+I +K+ K Sbjct: 144 EFACSAAYALASSAEEIIASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMG 203 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 SPF ++ ++ + +Q ++ +Y F V+ESRN+ + ++ +++ EA ++GLI Sbjct: 204 SPFQALSEESKERLQKRINDTYATFTGFVAESRNLSEEAVKN-TEANVYSAQEALELGLI 262 Query: 225 DVVGGQEEVWQSLYA 239 + + Q++ L Sbjct: 263 NSIMSQDDFLNYLQG 277 >gi|300114839|ref|YP_003761414.1| peptidase S49 domain-containing protein [Nitrosococcus watsonii C-113] gi|299540776|gb|ADJ29093.1| Peptidase S49 domain protein [Nitrosococcus watsonii C-113] Length = 325 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 100/223 (44%), Gaps = 12/223 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + ++ + + G I + QE+ + + +D +++ L + GG + Sbjct: 82 QKHAKRIFVLDFHGDIRATAVASLRQEITAVLSVATPEDE---ILLRLENGGGLVHEHGL 138 Query: 86 IFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +++++ ++ P+ V ++AAS GY+++C N I+AA +++GSIG L Q P Sbjct: 139 AASQLERIRRKQIPLTIAVDKIAASGGYMMACVGNRIIAAPFAIIGSIGALLQVPNFHRL 198 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LDK G+ + +K+ +K + F + ++ + V+ + F + R P+ Sbjct: 199 LDKHGIDFEQIKAGELKRTVTLFGINTDRDRELAKQQVEDIHQLFKEFIVRHR--PHIDL 256 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + G+ W +AK++ LID + ++ + Sbjct: 257 SQTATGQHWHAIQAKELNLIDDLETSDDYLTEACKTADLYKVT 299 >gi|38707715|ref|NP_944888.1| Putative head maturation protease [Enterobacteria phage Felix 01] gi|33340318|gb|AAQ14669.1|AF320576_99 unknown [Enterobacteria phage Felix 01] gi|269975290|gb|ACZ55514.1| putative head maturation protease [Staphylococcus phage SA1] Length = 448 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + + L + D+S +++ + S GG A + R I + +K +I V Sbjct: 84 GGLSSYEGLRRGFDEALADESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVD 143 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++ ++ I+A+ + VGSIGV+ + + +K GV+I +K+ K Sbjct: 144 EFACSAAYALASSAEEIIASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMG 203 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 SPF ++ ++ + +Q ++ +Y F V+ESRN+ + ++ +++ EA ++GLI Sbjct: 204 SPFQALSEESKERLQKRINDTYATFTGFVAESRNLSEEAVKN-TEANVYSAQEALELGLI 262 Query: 225 DVVGGQEEVWQSLYA 239 + + Q++ L Sbjct: 263 NSIMSQDDFLNYLQG 277 >gi|260757395|ref|ZP_05869743.1| clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella abortus bv. 4 str. 292] gi|260667713|gb|EEX54653.1| clp protease:peptidase U7:Na+/H+ antiporter NhaA [Brucella abortus bv. 4 str. 292] Length = 708 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 12/185 (6%) Query: 38 VARIAIRGQIEDS----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + + G I +E+ D A A+ +S++SPGG+ I+ Sbjct: 493 IPVVRLHGAIMTGGTSLRPTLSLASTAGILEKAFADKHAPAVAISINSPGGAPVQSRLIY 552 Query: 88 RAIQKVK--NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 R I+ + ++K V V ++AAS GY+I+ A + I+A +S+VGSIGV+ L Sbjct: 553 RRIRDLAVEHQKKVFVFVEDVAASGGYMIALAGDEIIADPSSIVGSIGVVSASFGFPELL 612 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 K+GV + + K PF + ++ ++ + + F+ +V E R Sbjct: 613 KKIGVERRVYTAGSNKVTLDPFQPEKAEDIERLKALQLEIHATFIDMVKERRAASLATIP 672 Query: 206 VLSDG 210 + S Sbjct: 673 IFSAA 677 >gi|197261841|ref|ZP_03161915.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197240096|gb|EDY22716.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 498 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 198 LKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 258 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 291 >gi|168264539|ref|ZP_02686512.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347014|gb|EDZ33645.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 498 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 198 LKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 258 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 291 >gi|33340432|gb|AAQ14783.1| unknown [Enterobacteria phage Felix 01] Length = 418 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + + L + D+S +++ + S GG A + R I + +K +I V Sbjct: 54 GGLSSYEGLRRGFDEALADESIKTIVLHIDSGGGEASGCFELARHIMASRGQKKIIAYVD 113 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++ ++ I+A+ + VGSIGV+ + + +K GV+I +K+ K Sbjct: 114 EFACSAAYALASSAEEIIASPDADVGSIGVIMVHQELTKAFEKNGVTINVIKAGEFKGMG 173 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 SPF ++ ++ + +Q ++ +Y F V+ESRN+ + ++ +++ EA ++GLI Sbjct: 174 SPFQALSEESKERLQKRINDTYATFTGFVAESRNLSEEAVKN-TEANVYSAQEALELGLI 232 Query: 225 DVVGGQEEVWQSLYA 239 + + Q++ L Sbjct: 233 NSIMSQDDFLNYLQG 247 >gi|62179788|ref|YP_216205.1| Gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127421|gb|AAX65124.1| Gifsy-1 prophage head-tail preconnector gp5 [Phage Gifsy-1] gi|322714256|gb|EFZ05827.1| Gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 498 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 198 LKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 258 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 291 >gi|303326909|ref|ZP_07357351.1| minor capsid protein C, degenerate [Desulfovibrio sp. 3_1_syn3] gi|302862897|gb|EFL85829.1| minor capsid protein C, degenerate [Desulfovibrio sp. 3_1_syn3] Length = 441 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 17/219 (7%) Query: 37 HVARIAIRGQIEDSQ---------------ELIERIERISRDDSATALIVSLSSPGGSAY 81 +VA + +RG ++ ++ +E + D SATAL+++L SPGG+ Sbjct: 78 NVAVVRVRGPLDRETAVSGWTGKRLSTGYGDIRSAMETAAADPSATALLLALDSPGGAVG 137 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + + AI V RKPV + ASA Y ++ A+ + A T+ VGSIGV+ + Sbjct: 138 GCKELADAIAAVAARKPVAAYADGLCASAAYWLASATGRVFAPVTAQVGSIGVVMIHADF 197 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI-P 200 +K+GVS + KA + + ++P++ +Q V++ + F V+ + + P Sbjct: 198 SHLNEKMGVSYSYITGGEWKAVGNKNAPLSPESRAYLQQRVNALHSIFRADVARNMGLDP 257 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVV-GGQEEVWQSLY 238 DG+I+ EA+++GL+ + G EE L Sbjct: 258 SADACAWGDGQIFLAQEAQRLGLVSAIVTGMEEAIHILA 296 >gi|41615105|ref|NP_963603.1| hypothetical protein NEQ315 [Nanoarchaeum equitans Kin4-M] gi|40068829|gb|AAR39164.1| NEQ315 [Nanoarchaeum equitans Kin4-M] Length = 256 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 13/238 (5%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERIS 61 ++K+ ++ ++ + +Y +VA I I I ++++I+ ++ Sbjct: 7 IIKRNSWILFLVGIILFSHIYSIL------TKGNVAVIYIDKPITSDFAEKVIDFLKEA- 59 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 A+++ + SPGG+ I + + ++ K I+ + + SA Y I+ +N I Sbjct: 60 --KDYKAIVLYIDSPGGAPEPTYRIIKYLDRINKTK--ISYIAQYGTSASYWIATHTNKI 115 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A E S VGS+GVL + L KLGV S K +P ++ Q ++ Sbjct: 116 FANELSFVGSVGVLIGKIDLSGLLSKLGVKYYSFSKGKYKEFSNPLLPLDNYTKQYYNEL 175 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D Y++F+ V E R+I + + + I+ G EAKK GLID +G ++V L Sbjct: 176 ADKLYNFFLTDVLEHRDIKKECLSKVKESTIFLGIEAKKCGLIDYIGTMDDVKAYLEK 233 >gi|16765926|ref|NP_461541.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992742|ref|ZP_02573838.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168466629|ref|ZP_02700483.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168467948|ref|ZP_02701785.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168468075|ref|ZP_02701912.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822377|ref|ZP_02834377.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|169257232|ref|YP_001700609.1| bacteriophage prohead protease; Lambda gpC homolog [Phage Gifsy-1] gi|194445600|ref|YP_002041869.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|16421154|gb|AAL21500.1| Gifsy-1 prophage protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194404263|gb|ACF64485.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195628838|gb|EDX48256.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195628990|gb|EDX48386.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630840|gb|EDX49432.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205329131|gb|EDZ15895.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205341279|gb|EDZ28043.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261247803|emb|CBG25631.1| capsid assembly protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|312913598|dbj|BAJ37572.1| Gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085509|emb|CBY95288.1| Head-tail preconnector protein GP5 Contains: Scaffold protein GP6; Head protein GP6 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222685|gb|EFX47756.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130940|gb|ADX18370.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989534|gb|AEF08517.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 498 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 198 LKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 258 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 291 >gi|323454083|gb|EGB09953.1| hypothetical protein AURANDRAFT_12803 [Aureococcus anophagefferens] Length = 204 Score = 174 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 8/206 (3%) Query: 33 DNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + + G ++ SQ E + + + +++ L+S GG+ Sbjct: 1 EAGARAFVLDFDGDVQASQLANLREEVTAVLGFANATRGDEVVLKLNSGGGTVTGYGLAA 60 Query: 88 RAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + +VK+ + + ++AAS GY+++C + IVA+ +++GSIGV+ P V L Sbjct: 61 AQLMRVKDAGFKLTVCIEQVAASGGYMMACVGDRIVASPFAVLGSIGVISDIPNVYQRLK 120 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K G+ ++V + K +P +V + + + + + F V+ R P Sbjct: 121 KEGIEFQTVTAGAYKRTLTPTKKVTKEDMDKSKQDIKEIFTLFKTFVAGQR--PALDIDA 178 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ G W G +A K L D + ++ Sbjct: 179 VATGETWFGEDALKRRLCDELRTFDD 204 >gi|257386269|ref|YP_003176042.1| peptidase S49 [Halomicrobium mukohataei DSM 12286] gi|257168576|gb|ACV46335.1| peptidase S49 [Halomicrobium mukohataei DSM 12286] Length = 307 Score = 174 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 23/259 (8%) Query: 5 LKKIKTRYVMLSLVTLTV-----VYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERI 57 +K + T Y ++ +V L + S + D+ +A + I+G I + E+ ++ Sbjct: 9 VKTLLTSYTVIIVVALLIGAAVGPAVSSALFQSDDEGTIAAVTIQGPISGPTADEVTRQL 68 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + DDS A+++ + S GGS A EA +RA++++ KPV+T V +AAS Y + Sbjct: 69 RTLRTDDSIDAVVLRIDSGGGSVAASEAQYRAVKRLAREKPVVTSVRGVAASGAYYTALP 128 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 S+ I A LVGS+GV P GV +SV + P KA + Sbjct: 129 SDEIYATPGGLVGSVGVRALIP------QPDGV-PRSVTTGPDKAGG-----LTGDD--- 173 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ V++ FV V R + L++ ++++GA A GL D +GG E + Sbjct: 174 IRGQVETLKRSFVDSVYAERGDRLSLSRTELTNAKVYSGAAAVDNGLADEIGGLETAIAA 233 Query: 237 LYALGVDQSIRKIKDWNPP 255 S + P Sbjct: 234 AAEKAGLDSYDVVYRSTTP 252 >gi|301159156|emb|CBW18670.1| putative bacteriophage tail protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 482 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 62 IAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAF 121 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 122 DCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 181 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 182 LKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAV 241 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 242 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 275 >gi|307310225|ref|ZP_07589874.1| peptidase S49 [Sinorhizobium meliloti BL225C] gi|306899777|gb|EFN30402.1| peptidase S49 [Sinorhizobium meliloti BL225C] Length = 301 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 14/219 (6%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +P +A I I G + + + + ++ D A++ + S GG Sbjct: 76 APGIALIEIEGSLVNKGKWIGKSCGMTSYEAIGVQVRDCIERDDIKAVVFEVDSYGGEVT 135 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I ++ KP I + + A SAGYL++ +V +T + GSIGV+ + + Sbjct: 136 GAFDCAEQIFELSQLKPTIAVLTDHACSAGYLLASPCRQLVIPQTGICGSIGVISMHVDM 195 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 +L K G+ + +K+ KA+ +P+ + +Q ++ F V+ R Sbjct: 196 SAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQELAELEELRVEFAATVARYRAGRL 255 Query: 202 DKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + L+ R++ G +A GL+D V +V ++ A Sbjct: 256 TQQSALATEARVYRGQKAVDAGLVDAVARPSQVLEAFEA 294 >gi|24112121|ref|NP_706631.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 301] gi|30062238|ref|NP_836409.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 2457T] gi|24050954|gb|AAN42338.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 301] gi|30040483|gb|AAP16215.1| head-tail preconnector gp5 [Shigella flexneri 2a str. 2457T] gi|281600080|gb|ADA73064.1| Head-tail preconnector gp5 [Shigella flexneri 2002017] gi|313649543|gb|EFS13973.1| head-tail preconnector protein [Shigella flexneri 2a str. 2457T] gi|332761373|gb|EGJ91659.1| head-tail preconnector protein GP5 [Shigella flexneri 2747-71] gi|332763428|gb|EGJ93668.1| head-tail preconnector protein GP5 [Shigella flexneri K-671] Length = 501 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + S GG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSSGGQATGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + K Q MQ +D++ F V+ + D Sbjct: 198 LAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + L D + + + A Sbjct: 258 MG-TEAAVFEGQSGIEAELADELINASDAISVMAA 291 >gi|267993060|gb|ACY87945.1| prophage head-tail preconnector [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|267994733|gb|ACY89618.1| head-tail preconnector-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] Length = 498 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMICRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 198 LKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAEKVARYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 258 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 291 >gi|311694855|gb|ADP97728.1| capsid protein of prophage [marine bacterium HP15] Length = 441 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 93/220 (42%), Gaps = 19/220 (8%) Query: 26 SWSSHVEDNSPH-----VARIAIRGQI-------------EDSQELIERIERISRDDSAT 67 S+ S N P+ +A I + G + +I R+E D + Sbjct: 57 SFGSDRPRNRPYEVLNGIALIPVAGTLVHKFGHLQPYSGMTGYDGIIARVEEALADPTVN 116 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + +PGG R + +++ +KP+ + ++MA SAG + A++ ++ Sbjct: 117 GILLDMDTPGGEVAGCFDTARRLNELRGQKPIASISYDMACSAGMALHSATDYRYTTTSA 176 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 GS+GV+ + + L G+ + + S K + +P+ + + + Q D + Sbjct: 177 RTGSVGVVMMHASFEEQLKANGIDVTLIHSGAFKVDGNPYENLPEQVLARFQAESDRLRN 236 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 F +V+ + L ++ I+TG +A + G D + Sbjct: 237 EFADMVATHIGLSASDVLA-TEAAIYTGQDAIEAGFADEL 275 >gi|200390897|ref|ZP_03217508.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603342|gb|EDZ01888.1| gifsy-1 prophage head-tail preconnector gp5 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 498 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + R+++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHKLGGMRPFSGMTGYDGITARLQQAVSDPEVKGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV +E A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEK 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + G+ I + S KA+ +P ++ Q +D + F V+ + D Sbjct: 198 LKQEGIDITLIYSGAHKADLTPSQKLPESVHADYQQRMDEARKMFAVKVARYTGLSVDAV 257 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G GL D + + + Sbjct: 258 MA-TEAAVYDGQAIITTGLADGMVNAADAIGVMAE 291 >gi|299067579|emb|CBJ38781.1| bacteriophage head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Ralstonia solanacearum CMR15] Length = 416 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + ++++ D A+++ + SPGG + Sbjct: 59 IAVIPIHGTLVRRTVGLEAESGLASYTAIGDQLDAALADQGVAAILLDVDSPGGESSGVF 118 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ KPV ++MA SA Y ++ A++ + + T VGSIGV+ + Sbjct: 119 DLADRIRAAAAVKPVWAVANDMAFSAAYALASAASRVFVSRTGGVGSIGVIAMHVDQSVK 178 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K G+ +V + K + +P + + +A +Q V Y FV V+ R + + Sbjct: 179 DAKDGIHYTAVFAGARKNDLNPHAPITDEAQAQLQAEVSRIYGLFVATVASYRGLSVEAV 238 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G +A GL D VG E+ L A Sbjct: 239 TA-TEAGLFFGPDAVTAGLADAVGTFEDALAQLNA 272 >gi|309780992|ref|ZP_07675731.1| prophage LambdaMc01, peptidase, U7 family [Ralstonia sp. 5_7_47FAA] gi|330824611|ref|YP_004387914.1| peptidase S49 [Alicycliphilus denitrificans K601] gi|308920295|gb|EFP65953.1| prophage LambdaMc01, peptidase, U7 family [Ralstonia sp. 5_7_47FAA] gi|329309983|gb|AEB84398.1| peptidase S49 [Alicycliphilus denitrificans K601] Length = 413 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 15/250 (6%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI------------- 47 ++ +L + R + L +V Y + S VA I I G + Sbjct: 23 LDIILSVLGARIGLADLAA-SVGYTPAARAPGPPSGKVAVIPIHGTLVRRTSGLEAESGL 81 Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +++ A+++ + SPGG + + I+ KPV ++MA Sbjct: 82 ASYTGIAAQLDAALTSPEVAAILLDIDSPGGESGGVFDLADRIRVASQVKPVWAVANDMA 141 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SA Y ++ A+ + A T VGSIGV+ + K GV +V + K + +P Sbjct: 142 FSAAYALASAATRVFVARTGGVGSIGVIAMHIDQSVKDAKDGVRYTAVFAGERKNDLNPH 201 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++ A +++ VD Y FV V+ R + D ++ ++ G +A GL D V Sbjct: 202 EPLSDAAHAVLKAEVDRVYELFVETVARHRGLDADAVRA-TEAGLFFGPDAVATGLADAV 260 Query: 228 GGQEEVWQSL 237 G ++ L Sbjct: 261 GSLDDALTQL 270 >gi|333021224|gb|EGK40478.1| head-tail preconnector protein GP5 [Shigella flexneri K-304] Length = 467 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + S GG A Sbjct: 44 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSSGGQATGAF 103 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 104 DCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 163 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + K Q MQ +D++ F V+ + D Sbjct: 164 LAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 223 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + L D + + + A Sbjct: 224 MG-TEAAVFEGQSGIEAELADELINASDAISVMAA 257 >gi|332768316|gb|EGJ98501.1| peptidase S49 family protein [Shigella flexneri 2930-71] Length = 467 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + S GG A Sbjct: 44 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADTQVRGVLLDIDSSGGQATGAF 103 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 104 DCADMIYRLRQLKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMGHVSYAGH 163 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + + K + + F + K Q MQ +D++ F V+ + D Sbjct: 164 LAQAGVDITLIYAGSHKVDGNQFESLPAKVRQDMQQRIDAARRMFAEKVAMYTGLSVDAV 223 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ ++ G + L D + + + A Sbjct: 224 MG-TEAAVFEGQSGIEAELADELINASDAISVMAA 257 >gi|307320186|ref|ZP_07599606.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306894232|gb|EFN24998.1| peptidase S49 [Sinorhizobium meliloti AK83] Length = 301 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 14/216 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + + ++ D A++ + S GG Sbjct: 79 IALIEIEGSLVNKGKWIGKSCGMTSYEGISAQVRDCIDRDDIKAVVFEVDSYGGEVTGAF 138 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++ KP I + + A SAGYL++ +V +T + GSIGV+ + + + Sbjct: 139 DCAEQIFELSQVKPTIAVLTDHACSAGYLLASPCRQLVIPQTGICGSIGVISMHVDMSAW 198 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K G+ + +K+ KA+ +P+ + +Q ++ F V+ R + Sbjct: 199 LAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQELAELEELRVEFAATVARYRAGRLTQQ 258 Query: 205 LVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+ R++ G +A GL D V +V ++ A Sbjct: 259 SALATEARVYRGQKAVDAGLADAVARPSQVLEAFEA 294 >gi|307321389|ref|ZP_07600787.1| peptidase S49 [Sinorhizobium meliloti AK83] gi|306892934|gb|EFN23722.1| peptidase S49 [Sinorhizobium meliloti AK83] Length = 301 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 14/219 (6%) Query: 35 SPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +P +A I I G + + + + ++ D A++ + S GG Sbjct: 76 APGIALIEIEGSLVNKGKWIGKSCGMTSYEAIGVQVRDCIERDDIKAVVFEVDSYGGEVT 135 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I ++ KP I + + A SAGYL++ +V +T + GSIGV+ + + Sbjct: 136 GAFDCAEQIFELSQVKPTIAVLTDHACSAGYLLASPCRQLVIPQTGICGSIGVISMHVDM 195 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 +L K G+ + +K+ KA+ +P+ + +Q ++ F V+ R Sbjct: 196 SAWLAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQELAELEELRVEFAATVARYRAGRL 255 Query: 202 DKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + L+ R++ G +A GL D V +V ++ A Sbjct: 256 TQQSALATEARVYRGQKAVDAGLADAVARPSQVLEAFEA 294 >gi|53803155|ref|YP_115065.1| prophage LambdaMc01, U7 family peptidase [Methylococcus capsulatus str. Bath] gi|53756916|gb|AAU91207.1| prophage LambdaMc01, peptidase, U7 family [Methylococcus capsulatus str. Bath] Length = 408 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 14/216 (6%) Query: 37 HVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I + G + L +++ A+++ + SPGG + Sbjct: 58 RIAVIPVHGTLVRRTVGLEAESGLASYAGLAAQLDAAVASAQVDAILLDIDSPGGESGGV 117 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ KPV ++MA SA Y ++ A++ + + T VGSIGV+ + Sbjct: 118 FDLADRIRAAAAVKPVWAVANDMAFSAAYALASAASKVFVSRTGGVGSIGVIAMHVDQSA 177 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K GV +V + K + +P ++ +A ++Q VD Y FV V+ R + Sbjct: 178 KDAKDGVRYTAVFAGERKNDLNPHEPISDEAHALLQAEVDRVYRLFVDTVARHRGLDARA 237 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G +A GL D VG ++ L Sbjct: 238 IEA-TEAGLFFGQDAVTAGLADAVGTFDDALSQLTE 272 >gi|190571676|ref|YP_001976034.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357948|emb|CAQ55411.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 345 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 14/218 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V N A I I G + +++ E+I + D S +I+ + SPG Sbjct: 40 VNQNIEKTAVIEIHGILTKKPGAFDVFLGMTSYEQIEEQITQALADSSIETIILEIDSPG 99 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + I + + +K +I ++ A SA Y I+ ++ + + TS VGSIGV+ Sbjct: 100 GEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSGVGSIGVIAS 159 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + F +K G+ +V + K + +P + ++++ +Q VD Y FV+L++ +R Sbjct: 160 HIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPMTSESLESLQKEVDRLYEMFVQLIARNR 219 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 N+ + ++ ++ G +A ++GL D V E Sbjct: 220 NLSIEAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 256 >gi|126737104|ref|ZP_01752839.1| Periplasmic serine protease [Roseobacter sp. SK209-2-6] gi|126721689|gb|EBA18392.1| Periplasmic serine protease [Roseobacter sp. SK209-2-6] Length = 305 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 22/239 (9%) Query: 29 SHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSS 75 ++ V + + G I + + + + D A A+++ + S Sbjct: 55 EPIQGRRGTVHLLRLHGTIMPRGGMMARMSGGASLEMFQKAFSQAASDAHAQAIVIEVDS 114 Query: 76 PGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 PGG + I + + +P++ + +AASA Y I+ A++ +V + VGSIGV Sbjct: 115 PGGMVEQVQETASMIYSARRSGRPIVAVANSLAASAAYWIASAADELVVTPSGRVGSIGV 174 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + L+K G+ + + K E PF ++ P+A Q VD++Y F V+ Sbjct: 175 YTMHDNLAVALEKAGIERSVISAGARKVESLPFGKLAPEARAATQAQVDATYERFTHDVA 234 Query: 195 ESRNI--------PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 E R + P + GR + EA ++G+ D V E Q L G Sbjct: 235 EFRGVASEVVRADPEEAEAHFGGGRAYHAQEAVRLGMADRVATLSETIQRLSTEGRVPK 293 >gi|320108129|ref|YP_004183719.1| peptidase S49 [Terriglobus saanensis SP1PR4] gi|319926650|gb|ADV83725.1| peptidase S49 [Terriglobus saanensis SP1PR4] Length = 248 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSS---------HVEDNSPHVARIAIRGQIEDSQEL 53 F L I +ML+L+ V+ + S + +S + I + G I + L Sbjct: 32 FWLLIIGGSLLMLALLIAGTVWSTMQSLKADDSEENGIATSSKKIGVIEVTGVILTADTL 91 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAG 111 +++ +++ D A+I+ ++SPGG A A + +F + +++ K +I + + AS Sbjct: 92 SQQMRKMAADSDVKAIILHINSPGGGAAASQELFNEVVRIRKESHKKIIASIESVGASGA 151 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 Y I+ + I A + S+VGSIGV+ ++ L + ++K+ +K P ++ Sbjct: 152 YYIASGCDRIYANDASVVGSIGVIMEWTNYGELLRWAKLKNVTLKAGELKDAGDPTRDLT 211 Query: 172 PKAVQMM 178 PK + Sbjct: 212 PKEQSVW 218 >gi|153840986|ref|ZP_01993380.1| secreted protease [Vibrio parahaemolyticus AQ3810] gi|149745539|gb|EDM56755.1| secreted protease [Vibrio parahaemolyticus AQ3810] Length = 192 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 3/146 (2%) Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L K Sbjct: 1 LDRIKAAGLPLTISVDKVAASGGYMMACVADKIVSAPFAIVGSIGVIAQIPNFNKLLKKH 60 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E KA + ++ ++ F + E R P + ++ Sbjct: 61 DIEYEQLTAGEYKRTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVA 118 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVW 234 G W G +AK++GL+D + +++ Sbjct: 119 TGEHWFGTQAKELGLVDEISTSDDLV 144 >gi|300689946|ref|YP_003750941.1| bacteriophage head-tail preconnector protein GP5 [Ralstonia solanacearum PSI07] gi|299077006|emb|CBJ49620.1| bacteriophage head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] [Ralstonia solanacearum PSI07] Length = 419 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 14/213 (6%) Query: 37 HVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I I G + + ++++ D A+++ + SPGG + Sbjct: 58 QIAVIPIHGTLVRRTVGLEAESGLASYTAIGDQLDAALTDPGIAAILLDVDSPGGESGGV 117 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ KPV ++MA SA Y ++CA++ + + T VGSIGV+ + Sbjct: 118 FDLADRIRAAAAIKPVWVVANDMAFSAAYALACAASRVFVSRTGGVGSIGVIAMHVDQSV 177 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 K GV +V + K + +P + +A +Q V Y FV V+ R + + Sbjct: 178 KDAKDGVRYTAVFAGARKNDLNPHEPLTDEAQAQLQAEVSRIYGLFVATVARYRGLSAET 237 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ ++ G +A GL D VG ++ Sbjct: 238 VTA-TEAGLFFGQDAVAAGLADAVGTFDDALAQ 269 >gi|212712418|ref|ZP_03320546.1| hypothetical protein PROVALCAL_03507 [Providencia alcalifaciens DSM 30120] gi|212684941|gb|EEB44469.1| hypothetical protein PROVALCAL_03507 [Providencia alcalifaciens DSM 30120] Length = 483 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 86/215 (40%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + + +++ D +++ + SPGG A Sbjct: 68 IAVLPVSGTLVHKLGAMRPFSGMTGYDGITAFLKQAVTDPEVKGILLDIDSPGGQASGAF 127 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + ++ KP+ H+MA SA L++ A + + +T+ +GSIGV+ + + Sbjct: 128 DCADMVARLGQEKPIWALCHDMACSAAMLLASACSRRLVTQTAKIGSIGVMMAHANREQQ 187 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L + GV I + S K + + F + + Q +D + FV+ V+ +P Sbjct: 188 LAQTGVDITLIYSGAHKVDGNAFQALPERVRADFQRQIDEARTLFVQKVAGYLGVPESTI 247 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ + G VGL D + + + + Sbjct: 248 RE-TEAATYQGQAGIDVGLADDMVNAADAVDVMAS 281 >gi|332534170|ref|ZP_08410018.1| putative capsid assembly protein/protease [Pseudoalteromonas haloplanktis ANT/505] gi|332036459|gb|EGI72928.1| putative capsid assembly protein/protease [Pseudoalteromonas haloplanktis ANT/505] Length = 315 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 15/227 (6%) Query: 33 DNSPHVARIAI-------RGQIEDSQE-------LIERIERISRDDSATALIVSLSSPGG 78 + H+ + + RG I DS E L ++++ DDS +++ ++S GG Sbjct: 68 EKGDHIVVLPVHGILIPRRGSITDSCEEVMSYEFLRTQMQKALNDDSVLEIVLDINSGGG 127 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A A I + ++ KP+ ++ A S YLI+ A I+ ++T+ VGS+GV + Sbjct: 128 TAQAAFECAEFIYQARSIKPIRAIINFNAYSGAYLIAAACTEIIISDTAGVGSVGVYQKR 187 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + G + + K P E++ + + ++ +Y FV + + R+ Sbjct: 188 LDMTKAYADAGYKMHTFHRGATKVYFHPDVEMSEEERAHTEKNIEKTYQKFVGAIVKYRD 247 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + ++ L ++ + G A + L D + ++ + V +S Sbjct: 248 MSLEQVLA-TEADTYEGQAAIDLKLADRLATPQDAINQIAQGAVQRS 293 >gi|207725418|ref|YP_002255814.1| bacteriophage-related protein [Ralstonia solanacearum MolK2] gi|206590654|emb|CAQ37616.1| bacteriophage-related protein [Ralstonia solanacearum MolK2] Length = 416 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 14/216 (6%) Query: 37 HVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 +A I I G + + ++++ D A+++ + SPGG + Sbjct: 58 QIAVIPIHGTLVRRTVGLEAESGLASYTAIGDQLDAALADPGVAAILLDVDSPGGESGGA 117 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I+ KPV ++MA SA Y ++ A++ + + T VGSIGV+ + Sbjct: 118 FDLADRIRAAAAVKPVWAVANDMAFSAAYALASAASRLFVSRTGGVGSIGVIAMHVDQSV 177 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + G+ +V + K + +P ++ A +Q VD Y FV V+ +R I + Sbjct: 178 KDAQDGIRYTAVFAGARKNDLNPHEPISDAAQAQLQAEVDRLYGLFVATVANNRGIAAEA 237 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 G + G +A GL D VG ++ L A Sbjct: 238 VTATEAGLFF-GQDAVAAGLADDVGTFDDALAQLTA 272 >gi|145350683|ref|XP_001419729.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579961|gb|ABO98022.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 234 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 8/215 (3%) Query: 35 SPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 HV + G + SQ E + + R ++ + +++ L++ GG+ Sbjct: 14 KKHVFVLNFFGDVRASQAEQLREEVTGLLRSAKKERGDEVVLRLNTGGGTVTGYGLAAAQ 73 Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + ++K+ + V ++AAS GY+++C ++ IVA+ +++GSIGV+ + P V L + Sbjct: 74 LMRIKDAGLKLTICVEQVAASGGYMMACVADEIVASPFAVLGSIGVISEQPNVYERLQRE 133 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 G+ ++V + K +P +V + ++ + ++ F V+E+R P ++ Sbjct: 134 GIEFQTVTAGKFKRTLTPTKKVTEEDLEKSKKDIEDVLVLFKGFVAENR--PTLDIDNVA 191 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 G W G +A L+D + ++V L + G + Sbjct: 192 TGETWFGKDALSRNLVDKLKTSDDVLLDLLSAGAE 226 >gi|317485330|ref|ZP_07944210.1| peptidase family S49 [Bilophila wadsworthia 3_1_6] gi|316923456|gb|EFV44662.1| peptidase family S49 [Bilophila wadsworthia 3_1_6] Length = 401 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 11/210 (5%) Query: 38 VARIAIRGQI--------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 VA I + G I + ++ D SA A++ ++SPGG + + A Sbjct: 47 VAVIPVSGAIVREQGWYGTGQDAVASSLKAALADPSARAILFDITSPGGVVAGTKELADA 106 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I + + +K + + ASA Y ++ A+ + A T+ VGSIGV+ +K G Sbjct: 107 IAEARTKKHCAAYANGLCASAAYWLASATGTVYAPLTATVGSIGVIMTITNYAKLEEKWG 166 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +S ++ KA E+ + + Q+ +++ + F V + D L + Sbjct: 167 ISTVTITGGKWKAAGQG-GELTDEERRYFQERINTLHQIFKADVGRHMGLTADPQL-WGE 224 Query: 210 GRIWTGAEAKKVGLI-DVVGGQEEVWQSLY 238 ++ A+++GL+ D+V ++ + L Sbjct: 225 AQLLLAQPARELGLVTDIVRDRDAAIRKLA 254 >gi|307308725|ref|ZP_07588421.1| peptidase S49 [Sinorhizobium meliloti BL225C] gi|306900731|gb|EFN31342.1| peptidase S49 [Sinorhizobium meliloti BL225C] Length = 301 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 14/216 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + + +++ D A++ + S GG Sbjct: 79 IALIEIEGSLVNKGKWIGKSCGMTSYEGISAQVQDCIDRDDIKAVVFEVDSYGGEVTGAF 138 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++ KP I + + A SAGYL++ +V +T + GSIGV+ + + + Sbjct: 139 DCAEQIFELSQVKPTIAVLTDHACSAGYLLASPCRQLVIPQTGICGSIGVISMHVDMSAW 198 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K G+ + +K+ KA+ +P+ + +Q ++ F V+ R + Sbjct: 199 LAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQELAELEELRVEFAATVARYRAGRLTQQ 258 Query: 205 LVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+ R++ G +A GL D V +V ++ A Sbjct: 259 SALATEARVYRGQKAVDAGLADAVARPSQVLEAFGA 294 >gi|190570700|ref|YP_001975058.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190570754|ref|YP_001975112.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190570768|ref|YP_001975126.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190356972|emb|CAQ54360.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357026|emb|CAQ54419.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357040|emb|CAQ54434.1| Putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 348 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 14/238 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIE 58 + +LSL F H N +A I I G + + + E IE Sbjct: 14 FELLSLYNSKQPIFKNLKHFHINPKGIAIIRIYGVLTKKTEAFDHILDMTSYENIHEEIE 73 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D S +++ + SPGG + I V+ +K +I ++ A SA Y I+ ++ Sbjct: 74 SALEDKSIETILLDIDSPGGEVNGVFDLADFIYGVRGKKRIIAIANDDAYSAAYAIASSA 133 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + TS VGSIGV+ + F +K G+ ++ + K + +P + ++++ + Sbjct: 134 EKVFVCRTSGVGSIGVIASHIDQSGFDEKQGIKYTTIFAGKRKNDLNPHEPMTSESLESL 193 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 194 QKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFINK 250 >gi|260577051|ref|ZP_05845030.1| peptidase S49 [Rhodobacter sp. SW2] gi|259020721|gb|EEW24038.1| peptidase S49 [Rhodobacter sp. SW2] Length = 448 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 14/206 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + +++ D + + + S GG Sbjct: 84 IAVIEIAGTLVHRGAWIGQSSGLTSYEGIAAQLQAALADPGVRGIALDIDSFGGEVAGAF 143 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + +KPV V E A SAGY+++ ++ I+ T VGSIGV+ + + Sbjct: 144 DLADRIRAARAQKPVRAFVAEHALSAGYVLASQADRIILPRTGAVGSIGVVALHTDMSGA 203 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 LD+ G+++ + + K + +P+ + MQ ++ F R V++ R D Sbjct: 204 LDQKGIAVTLIHAGSHKVDANPYQPLPEAVRSRMQAELEELRLLFARTVADGRGDRLDVA 263 Query: 205 LVL-SDGRIWTGAEAKKVGLIDVVGG 229 L ++ ++ G A GL D + Sbjct: 264 RALGTEAAVFRGEAAVHAGLADDLAD 289 >gi|213019703|ref|ZP_03335508.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|213019745|ref|ZP_03335549.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994651|gb|EEB55295.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994744|gb|EEB55387.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 341 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 14/238 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIE 58 + +LSL F H N +A I I G + + + E IE Sbjct: 7 FELLSLYNSKQPIFKNLKHFHINPKGIAIIRIYGVLTKKTEAFDHILDMTSYENIHEEIE 66 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D S +++ + SPGG + I V+ +K +I ++ A SA Y I+ ++ Sbjct: 67 SALEDKSIETILLDIDSPGGEVNGVFDLADFIYGVRGKKRIIAIANDDAYSAAYAIASSA 126 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + TS VGSIGV+ + F +K G+ ++ + K + +P + ++++ + Sbjct: 127 EKVFVCRTSGVGSIGVIASHIDQSGFDEKQGIKYTTIFAGKRKNDLNPHEPMTSESLESL 186 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 187 QKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFINK 243 >gi|22299153|ref|NP_682400.1| protease IV-like protein [Thermosynechococcus elongatus BP-1] gi|22295335|dbj|BAC09162.1| tlr1610 [Thermosynechococcus elongatus BP-1] Length = 369 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 40/291 (13%) Query: 11 RYVMLSLVTLTVVYFSWSSHV---EDNSPHVARIAIRGQIEDS----------------- 50 + +L ++ S H+ E + + +I I G I S Sbjct: 40 FFALLGILLAPASETSPYEHISGKESSRDRILQIDIAGPILGSPQSEEDIFFAPLVGVTY 99 Query: 51 -QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMA 107 E+ ++ ++D + A+ V++ +PGG+ + +AI I++ + +KPV + +A Sbjct: 100 GYEVQRQLAEAAKDKTIQAVFVNIKTPGGTIFGSQAIAEGIRRYRKATQKPVYAFIEGIA 159 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG------------VSIKSV 155 AS G ++ I A S+VGSIG+L + L + +++ Sbjct: 160 ASGGVWAMVTADQIYADHGSMVGSIGILGPSVFYYDRPTSLDNGLLRGGVTANSIEERTL 219 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K +PF + P+ +Q++Q ++ Y F+ V+++R I I++ Sbjct: 220 SAGRSKDIGNPFRRLTPQEIQVLQAGLEQEYTKFINHVAQARGIDPSVIRNEMGAMIFSN 279 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQS-----IRKIKDWNPPKNYWFC 261 +A++ LID + E +L + +R +D +P N F Sbjct: 280 DQAQRYRLIDGTRSRSETLNALARAANLKEGEYAIVRFRRDRSPLINQLFG 330 >gi|150396862|ref|YP_001327329.1| peptidase S49 [Sinorhizobium medicae WSM419] gi|150028377|gb|ABR60494.1| peptidase S49 [Sinorhizobium medicae WSM419] Length = 301 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 14/216 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + + ++ D A++ + S GG Sbjct: 79 IALIEIEGSLVNKGKWIGKSCGMTSYEAIGVQVRDCIERDDIKAVVFEVDSYGGEVTGAF 138 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I ++ KP I + + A SAGYL++ +V +T + GSIGV+ + + + Sbjct: 139 DCAELIFELSQVKPTIAVLTDHACSAGYLLASPCRQLVIPQTGICGSIGVISMHVDMSAW 198 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K G+ + +K+ KA+ +P+ + +Q ++ F V+ R + Sbjct: 199 LAKEGLKVTILKAGEHKADFNPYEAIPDDVLQQELAELEELRVEFAATVARYRAGRLTQQ 258 Query: 205 LVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+ R++ G +A GL D V +V ++ A Sbjct: 259 SALATEARVYRGQKAVDAGLADAVARPSQVLEAFEA 294 >gi|294635994|ref|ZP_06714433.1| peptidase, S49 family [Edwardsiella tarda ATCC 23685] gi|291090671|gb|EFE23232.1| peptidase, S49 family [Edwardsiella tarda ATCC 23685] Length = 190 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++ + V ++AAS GY+++C ++ IVAA +++GSIGV+ Q P +L K V Sbjct: 1 RLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPFAIIGSIGVVAQIPNFNRWLKKNDV 60 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 ++ + K + F E + +D ++ F + V R P ++ G Sbjct: 61 DVELHTAGEFKRTLTLFGENTEAGREKFCQELDETHRLFKQFVQRQR--PSLDVDAVATG 118 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 W G +A + GL+D + +++ + ++R ++ Sbjct: 119 EHWYGEQALEKGLVDELSTSDDLLIAEMEQAEVIAVRYMRR 159 >gi|83593390|ref|YP_427142.1| peptidase S49 [Rhodospirillum rubrum ATCC 11170] gi|83576304|gb|ABC22855.1| Peptidase S49 [Rhodospirillum rubrum ATCC 11170] Length = 264 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 19/248 (7%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR--AIQKVKNR 96 IA R + L I+R R AL+ ++SPGGS + I IQ + + Sbjct: 18 GVIAARDRALSLAALKPLIDRAFRVGDEVALV--INSPGGSPAQSQLIHDYIRIQADRRK 75 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 K VIT V ++AAS GY I+ A + I TSLVGSIGV+ LD+LGV + V Sbjct: 76 KAVITFVEDVAASGGYWIALAGDSIRVLPTSLVGSIGVVSAGFGFVEALDRLGVERRLVA 135 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR---NIPYDKTLVLSDGRIW 213 + K PFS + + + + + F+ V R + L G +W Sbjct: 136 AGRNKVRLDPFSPRKDEDTEWLTGLQAQLHERFIEHVRSRRAAQGTRLPEGGELFTGEVW 195 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLE 273 G EA L D + VD+ ++++ P + + L I L Sbjct: 196 LGREAIAHRLADQ--------EDSLGAYVDREKIRLREIAPRRMFSLRGL----IGGLAA 243 Query: 274 DTIPLMKQ 281 +T+ ++ Sbjct: 244 ETLGALEA 251 >gi|226227659|ref|YP_002761765.1| hypothetical protein GAU_2253 [Gemmatimonas aurantiaca T-27] gi|226090850|dbj|BAH39295.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 502 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 84/229 (36%), Gaps = 20/229 (8%) Query: 35 SPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +A I + G + D L + D A+++ SPGG Sbjct: 73 RDGIASIPVTGVLTRRASWFDAVCGAVDYTTLALELRSALDDHRVEAVVLQFDSPGGEVS 132 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I+ + RKPV V SA Y ++ I T+L G++GV V Sbjct: 133 GCSELGEQIRAARERKPVYAYVGGDCCSAAYWLAAQCTEIHVNNTALTGNLGVRMTAHDV 192 Query: 142 KPFLDKLGVSIKSV--KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L + G+ + ++ ++P K P +A Q +VD F V+ R++ Sbjct: 193 SRRLKREGIDVITIVSSTTPAK----PHDPTTDEAKARCQKIVDDLAAVFHAQVALGRSV 248 Query: 200 PYDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + G ++ G +A GL D V E + SL A S+ Sbjct: 249 EESQIYEQYGRGAVFVGVDAVSHGLADAVTTYEALLASLTAADRSDSLE 297 >gi|38348035|ref|NP_941284.1| putative peptidase [Serratia marcescens] gi|190410362|ref|YP_001965865.1| putative peptidase [Klebsiella pneumoniae] gi|226807771|ref|YP_002791467.1| hypothetical protein pEC-IMP_205 [Enterobacter cloacae] gi|226810085|ref|YP_002791780.1| hypothetical protein pEC-IMPQ_212 [Enterobacter cloacae] gi|38259512|emb|CAE51740.1| putative peptidase [Serratia marcescens] gi|146151156|gb|ABQ02922.1| putative peptidase [Klebsiella pneumoniae] gi|226425998|gb|ACO54091.1| conserved hypothetical protein [Enterobacter cloacae] gi|226426312|gb|ACO54404.1| conserved hypothetical protein [Enterobacter cloacae] Length = 393 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 119/349 (34%), Gaps = 81/349 (23%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS------HVEDNSPHVARIAIRGQIEDSQE----- 52 + + T V +SL+ +T V FS+ + E H+A I I G++ E Sbjct: 27 MFRIHTTAKVAMSLIAMTAVGFSFYNLYEQWQDAEGKKDHIAVIRISGEMGTGSETGDGT 86 Query: 53 -LIERIERISRDDSATALIVSLSSP------------------------------GGSA- 80 + + + + A A+I+ S GGS Sbjct: 87 VIATALAKAYNNPHAKAVIIEAESGGGGPSDAIIIYRQINALKNHQPQIERVSDAGGSLS 146 Query: 81 ---------YAGEAIFRAIQKVKNR-------------------KPVITEVHEMAASAGY 112 + +N KP+I V + ASA Y Sbjct: 147 SVAADKSNKTGSTERGDEARSKQNSLEVLSSGTGRFFSDIADSYKPIIVSVKGICASACY 206 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ I A +L+GSIGV + + + +GV + + + K PF ++ Sbjct: 207 YAVSPADAIYADSNALIGSIGVRMDHWNLSEIMSTVGVKNEPLTAGEFKDALDPFHPLSD 266 Query: 173 KAVQMMQDVV-DSSYHWFVRLVSESRNIPY-----DKTLVLSDGRIWTGAEAKKVGLIDV 226 + MQ + ++ + F+ V R + L GR+W +A K GL+D Sbjct: 267 STREFMQKEILNTMHEKFITDVELGRGKKLLSRHDADAVSLYSGRVWPTPQAVKYGLVDG 326 Query: 227 VGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL-SISSLLED 274 E+ L + S K++N P L L S+SS +E Sbjct: 327 DLTSVEIRTRLSKM---YSTDTFKNYNEPHRNLRSALGMLMSLSSNIES 372 >gi|6723229|dbj|BAA89626.1| orf7 [Wolbachia phage WO] Length = 353 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 106/234 (45%), Gaps = 14/234 (5%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V N A IAI G + +++ E IE + +++ + SPG Sbjct: 40 VNQNIEKTAVIAINGILTKKPGAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPG 99 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + I + + +K +I ++ A SA Y I+ ++ + + TS VGSIGV+ Sbjct: 100 GEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSGVGSIGVIAS 159 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + F +K G+ ++ + K + +P + ++++ +Q V Y F++L++ +R Sbjct: 160 HIDQSRFDEKQGIKYTTIFAGSRKNDLNPHEPMTSESLESLQKEVGRLYEMFLQLIARNR 219 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 + +K ++ ++ G +A ++GL D V E + + V + ++ D Sbjct: 220 GLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFINNHKSRSVSMTTNELPD 272 >gi|292656116|ref|YP_003536013.1| proteinase IV-like protein [Haloferax volcanii DS2] gi|291372078|gb|ADE04305.1| proteinase IV-like protein [Haloferax volcanii DS2] Length = 299 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 20/253 (7%) Query: 29 SHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 VA I++ G I + +L E + ++S A+++ + SPGGSA A E + Sbjct: 35 DAAAPTPDRVAVISVDGTITSYTADQLEEDLHEARENESIKAVVLQVDSPGGSAAASEQM 94 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + A+ + PV++ V AS Y S I +S++GS+GV P Sbjct: 95 YLAVNRTAQEMPVVSSVEGTGASGAYYTMLPSESIYVTPSSVIGSVGVRGSAP------- 147 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTL 205 +G S +++ P KA + + + +++ H FV V E R Sbjct: 148 -IGGSSNEIRTGPDKASMT---------LDHREAQIETLKHAFVGSVMEHRGDELSLSRE 197 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 ++ +++TGA A + G D +G + + ++ ++ ++ Sbjct: 198 EVAYAKVYTGARATQNGYADDIGTLQTAIDRAASEAGLENYEVVEKEPSTRSGIILLSSQ 257 Query: 266 LSISSLLEDTIPL 278 S+++ + P+ Sbjct: 258 NGNSTVVVEESPI 270 >gi|83648314|ref|YP_436749.1| periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] gi|83636357|gb|ABC32324.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 407 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 15/259 (5%) Query: 32 EDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGG 78 +D++P +A I + G + ++ + ++ D +++ + SPGG Sbjct: 51 KDSAPGIAVIPVHGSLVRRTLGLEAASGLSSYGQIAQSLDAAVADPQVAGILLDIDSPGG 110 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 A + I+ V RKPV ++ A SA Y I+ ++ + ++T+ VGS+GV+ + Sbjct: 111 EAGGVFELAERIRAVNARKPVWAHANDSAFSAAYAIAASAGRLSVSQTAGVGSVGVIALH 170 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + G++ ++ + K + SP + ++P+A +Q VD Y FV V++ RN Sbjct: 171 VDQSAKDARDGLAYTALYAGEHKNDLSPHAPLSPEAASSLQAEVDRLYRIFVSQVAQMRN 230 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 + D + R++ G EA +GL D V ++ Q ++ Y Sbjct: 231 LSEDDVRN-TKARLFFGEEAVSLGLADAVSSFDQTLSEFTDALRRQGALTPRERRNAHAY 289 Query: 259 WFCDLKNLSISSLLEDTIP 277 K L +S +L + +P Sbjct: 290 PRSS-KELIVSEVLPEALP 307 >gi|297519281|ref|ZP_06937667.1| putative periplasmic protease [Escherichia coli OP50] Length = 176 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL + I+ + K Sbjct: 1 KVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTL 60 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + E + + ++ ++ ++ F V R P ++ G W G +A + GL+ Sbjct: 61 TLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIEQVATGEHWYGQQAVEKGLV 118 Query: 225 DVVGGQEEVWQSLYA 239 D + +EV SL Sbjct: 119 DEINTSDEVILSLME 133 >gi|190570851|ref|YP_001975209.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357123|emb|CAQ54534.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 353 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 14/209 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V N A IAI G + +++ E+I + D S +I+ + SPG Sbjct: 40 VNQNIEKTAVIAIHGILTKKPGAFDVFLGMTSYEQIEEQITQALADSSIETIILEIDSPG 99 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + I + + +K +I ++ A SA Y I+ ++ + + TS VGSIGV+ Sbjct: 100 GEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSGVGSIGVIAS 159 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + F +K G+ +V + K + +P + ++++ +Q VD Y FV+L++ +R Sbjct: 160 HIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPMTSESLESLQKEVDRLYEMFVQLIARNR 219 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 N+ + ++ ++ G +A ++GL D Sbjct: 220 NLSIEAIKS-TEAGLYFGEKAVEIGLADG 247 >gi|83309474|ref|YP_419738.1| periplasmic serine protease [Magnetospirillum magneticum AMB-1] gi|82944315|dbj|BAE49179.1| Periplasmic serine protease [Magnetospirillum magneticum AMB-1] Length = 410 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 16/256 (6%) Query: 28 SSHVEDNSPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLS 74 S VE +A I + G + ++ E IE + D A+++ + Sbjct: 48 SDDVEVTPDGIAIIPVVGTLVARSGYLGAASGLTAYSDIAETIEAAATDPGIRAILLDVD 107 Query: 75 SPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 S GG + IQ ++++ KP+ E A SA Y I+C ++ + +T VGSI Sbjct: 108 SSGGEVGGLFDLVDHIQAIRSQCGKPIWAVADEAALSAAYAIACTADRLYVTQTGEVGSI 167 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + G++ V + K + +P ++ A +Q VD+ Y F L Sbjct: 168 GVVAVHRDESGADAQAGLAWTFVHAGAAKVDGNPHQPLSDSARAALQADVDALYGKFATL 227 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 V+E R + D ++ ++ G +A GL D VG + L A S+R Sbjct: 228 VAERRRLSPDAVRA-TEAVVYRGDQAVAAGLADKVGTLRQALADLGASLTRPSVRTPVLS 286 Query: 253 NPPKNYWFCDLKNLSI 268 P + ++ I Sbjct: 287 RPKETTMSEQTGDIPI 302 >gi|14189731|gb|AAK54346.1| probe 6 protein [Chlamydomonas reinhardtii] Length = 721 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 58/254 (22%) Query: 35 SPHVARIAIRGQI--------------------EDSQELIERIERISRDDSATALIVSLS 74 P +A + + G I D+ +L+ + I D+ A++V ++ Sbjct: 405 EPCIAVVTVSGTIVQGPVPPGSLAASNQQQQQVVDAAKLVADLRTIMDDNLVRAVVVRVN 464 Query: 75 SPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGGSA A ++I R +Q++K K V+ + ++AA Y I+ A+N +VA ++ G IG Sbjct: 465 SPGGSALASDSIRRELQRLKTLGKTVVVSMGDVAAGGAYYIASAANAVVAQPGTVTGGIG 524 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 K+VK++P+K +Q+ + V V Sbjct: 525 AA---------------ENKTVKAAPLK---------------HVQEEL-------VGQV 547 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 ++SR + L+ GR++TG +A +GL+D +GG EE AL + + + Sbjct: 548 AKSRGRAMWEMQQLAHGRVYTGRQAYDIGLVDQLGGLEEAISHAKALADLEEDVSVYEHP 607 Query: 254 PPKNYWFCDLKNLS 267 + L S Sbjct: 608 LRRLPLELTLFKRS 621 >gi|219681309|ref|YP_002456073.1| putative prohead protease [Erwinia phage phiEa21-4] gi|199580576|gb|ACH88963.1| putative prohead protease [Erwinia phage phiEa21-4] Length = 456 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + Q L + D S +++ + S GG A + R I++ N KPVI V Sbjct: 87 GGLSSYQGLTRAFDEAVADASVDKIVLMIDSGGGEAAGCFELARHIKEHSNGKPVIAYVD 146 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++CA++ I A+ + VGSIGV+ + ++K GV +K+ +K Sbjct: 147 ERACSAAYALACAASEIYASPNADVGSIGVIVIHQEFSKAMEKAGVQTNIIKAGEVKGMG 206 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +PF ++ +A ++Q VD+SY FV LVS SR I + + R++ EA + LI Sbjct: 207 NPFEPLSDQAKDLIQKSVDNSYTSFVNLVSSSRGISAEAVKD-TGARVYGAQEALSLKLI 265 Query: 225 DVVGGQEEVWQSLYA 239 D + +E L+ Sbjct: 266 DGIKTTDEFKDYLFG 280 >gi|84684063|ref|ZP_01011965.1| Peptidase U7 [Maritimibacter alkaliphilus HTCC2654] gi|84667816|gb|EAQ14284.1| Peptidase U7 [Rhodobacterales bacterium HTCC2654] Length = 855 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 16/217 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + L +I + D++ A+ + + S GG A Sbjct: 84 VAVIPVTGTLVRRGSFVGESSGMTSYEGLSAQIRAAAEDETVRAIAMEVDSFGGEAAGIF 143 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + +KPV + E A SAGY ++ ++ + GSIGV+ + + Sbjct: 144 ELMADIRAAREKKPVYAFLAEYALSAGYALASQADRVTIPPFGKAGSIGVVVIHADYQTQ 203 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR--NIPYD 202 L+ GV++ + S K + +P+ + + +Q D+ + F V + R I Sbjct: 204 LENAGVNVTLIHSGKHKVDGNPYQHLKGEVRDRIQQENDAMWLAFAEAVEQGRRGKITAQ 263 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + L G ++TG +A + GL D V +++L Sbjct: 264 GAMKLEAG-VFTGLDALRYGLADEVIEARAAFEALVE 299 >gi|321272257|gb|ADW80142.1| phage minor capsid protein [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1] Length = 343 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 14/259 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIE 58 + +LSL F S + N +A I I G + + + E IE Sbjct: 14 FELLSLYNSKQPIFKNSKYFHINPKGIAIIRIYGVLTKKTEAFDHILDMTSYENIHEEIE 73 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 D S +++ + SPGG + I + +K +I ++ A SA Y I+ ++ Sbjct: 74 SALEDKSIETILLDIDSPGGEVNGVFDLADFIYSARGKKRIIAIANDDAYSAAYAIASSA 133 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + + TS VGSIGV+ + F +K G+ ++ + K + +P ++ ++++ + Sbjct: 134 EKVFVSRTSGVGSIGVIASHIDQSRFDEKQGIKYTTIFAGSRKNDLNPHEQMTSESLESL 193 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q VD Y FV+L++ +RN+ ++ ++ G +A ++GL D V E + Sbjct: 194 QKEVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFINNHK 252 Query: 239 ALGVDQSIRKIKDWNPPKN 257 + V + ++ + N + Sbjct: 253 SRSVSMTTDELIEENYRRE 271 >gi|327198436|ref|YP_004327024.1| head maturation protease [Erwinia phage phiEa104] gi|311875132|emb|CBX44392.1| head maturation protease [Erwinia phage phiEa104] Length = 456 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 1/195 (0%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G + Q L + D S +++ + S GG A + R I++ N KPVI V Sbjct: 87 GGLSSYQGLTRAFDEAVADASVDKIVLMIDSGGGEAAGCFELARHIKEHSNGKPVIAYVD 146 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 E A SA Y ++CA++ I A+ + VGSIGV+ + ++K G+ +K+ +K Sbjct: 147 ERACSAAYALACAASEIYASPNADVGSIGVIVIHQEFSKAMEKAGIQTNIIKAGEVKGMG 206 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +PF ++ +A ++Q VD+SY FV LVS SR I + + R++ EA + LI Sbjct: 207 NPFEPLSDQAKDLIQKSVDNSYTSFVNLVSSSRGISAEAVKD-TGARVYGAQEALSLKLI 265 Query: 225 DVVGGQEEVWQSLYA 239 D + +E L+ Sbjct: 266 DGIKTTDEFKDYLFG 280 >gi|55378760|ref|YP_136610.1| protease IV-like [Haloarcula marismortui ATCC 43049] gi|55231485|gb|AAV46904.1| protease IV-like [Haloarcula marismortui ATCC 43049] Length = 319 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 20/241 (8%) Query: 13 VMLSLVTLTV---VYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSAT 67 V L++V + V ++ D+ P VA I +RG D+ + + + ++S Sbjct: 19 VTLAIVIAAIFAPVIWNGVPSGGDDDPSVAVITLRGGTTDANVNAVKQDLREARTNESIE 78 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ + SPGG + E + A+ + + PV+ V AAS GY ++ IV +S Sbjct: 79 AVVLRVDSPGGPVDSSEEFYLAVNRTASEMPVVAYVEGTAASGGYYGITPADEIVVKPSS 138 Query: 128 LVGSIGVLFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 VGSIGV+ Q P + +++ G + V+S P KA+ S +++ ++ Sbjct: 139 NVGSIGVIVQAPLSLIEQVEQQGETF--VRSGPDKAQIS---------KDSLREDIEVLQ 187 Query: 187 HWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 FV V R + + +++G + GA+A + G D +G + AL D Sbjct: 188 RSFVGTVMRHRGEQLTVSR-EEVANGGTYLGAQATENGFADRIGDTGLAIERAAALSDDI 246 Query: 245 S 245 Sbjct: 247 E 247 >gi|321272319|gb|ADW80201.1| minor capsid protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB] Length = 336 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 110/246 (44%), Gaps = 14/246 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIV 71 F S + N +A I I G + + + E IE D S +++ Sbjct: 20 FKNSKYFHINPKGIAIIRIYGVLTKKTEAFDHILDMTSYENIHEEIESALEDKSIETILL 79 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG + I + +K +I ++ A SA Y I+ ++ + + TS VGS Sbjct: 80 DIDSPGGEVNGVFDLADFIYSARGKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSGVGS 139 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ + F +K G+ ++ + K + +P ++ ++++ +Q VD Y FV+ Sbjct: 140 IGVIASHIDQSRFDEKQGIKYTTIFAGSRKNDLNPHEQMTSESLESLQKEVDRLYEMFVQ 199 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 L++ +RN+ ++ ++ G +A ++GL D V E + + V + ++ + Sbjct: 200 LIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFINNHKSRSVSMTTDELIE 258 Query: 252 WNPPKN 257 N + Sbjct: 259 ENYRRE 264 >gi|170742279|ref|YP_001770934.1| peptidase S49 [Methylobacterium sp. 4-46] gi|168196553|gb|ACA18500.1| peptidase S49 [Methylobacterium sp. 4-46] Length = 481 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++TL + + V +S I+ G ++ + D A+++ L Sbjct: 101 VAILTLVGEWVNRGGWVGASS---GLISYEG-------FAYQMRMAAADPRTKAILLDLE 150 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A +++V ++K V V+ MA+SA Y I+ ++ IV+ T L GSIGV Sbjct: 151 SPGGEAVGAFEAAELVRQVASQKSVTALVNGMASSAAYAIASGASRIVSIPTGLAGSIGV 210 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + + +L G+ + + K + +PF + +Q V+ Y FV V+ Sbjct: 211 VLMHLDISEYLRAEGMKPTLIFAGDHKVDWNPFEPLPDAVRADLQKEVEGFYAKFVTTVA 270 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R ++ + ++ R + G EA K GL+D +G + V L A Sbjct: 271 AGRPGLSEQAIRDTEARTFMGEEAIKAGLVDAIGTFDAVLADLSA 315 >gi|220922431|ref|YP_002497733.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219947038|gb|ACL57430.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 461 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 10/225 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++T+ + + V +S I+ G ++ + D ++++ L Sbjct: 101 VAIITMVGELVNRGAWVGASS---GLISYEG-------FAYQMRMAAADLRTKSILLDLE 150 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A +++V +KPV V+ MAASA Y I+ A+N IV T + GSIGV Sbjct: 151 SPGGEAVGAFEAAEVVRQVAAQKPVTALVNGMAASAAYAIASAANRIVTIPTGISGSIGV 210 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + +L G+ + + K + +P+ + +Q V+ Y FV V+ Sbjct: 211 VLCHLDFSEWLKAEGLKPTLIFAGDHKVDANPYEPLPDDVRANLQAEVEGFYGKFVETVA 270 Query: 195 ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + R + + + R + G EA GL+D VG EEV L A Sbjct: 271 KGRTNLDETKIRGTQARCFMGEEAVAAGLVDAVGTLEEVLADLSA 315 >gi|289804822|ref|ZP_06535451.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 204 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 10/178 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIER------ISRDDSATALIVSLSSPGGSA 80 + P V I +G ++ + + + A++ L SPGG Sbjct: 29 LGDIATSDKPRVWVIDFKGSMDAHE--VNALREEVTAVLAVAKPGDRAVV-RLESPGGVV 85 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + +Q+++++ P+ V ++AAS GY+++C + I+AA ++VGSIGV+ Q P Sbjct: 86 HGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVAEKIIAAPFAIVGSIGVVAQIP 145 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 FL + I+ + K + E + Q ++ ++ ++H F V R Sbjct: 146 NFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR 203 >gi|311234315|gb|ADP87169.1| peptidase S49 [Desulfovibrio vulgaris RCH1] Length = 425 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 38 VARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 VA + +RG + + + +++ D + A+++++ SPGG+ + Sbjct: 70 VAVVNMRGTLTKRGSWWTTGMEGVRTTVQQALDDPAVRAVLLAIDSPGGTVDGTRELADW 129 Query: 90 IQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I KP+ + SA Y I ++ + A ++VGS+GVL+ + +L+ Sbjct: 130 IAARVADGVKPIASYADGTMCSAAYWIGGSTGRVFAPAAAIVGSVGVLWMHYDWSQYLET 189 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ + + KA +P + ++ Q ++D++Y F+ VS + Sbjct: 190 NGIRATYITAGSRKAAGAPEAPLSDNDKAYFQHLIDTAYTQFLDGVSAPMGLDRANPAAW 249 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 +DG+++ EA +GL+ + Sbjct: 250 ADGQVFRATEALALGLVTAI 269 >gi|120602110|ref|YP_966510.1| peptidase S49 [Desulfovibrio vulgaris DP4] gi|120562339|gb|ABM28083.1| protein C, Serine peptidase, MEROPS family S49 [Desulfovibrio vulgaris DP4] Length = 408 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 38 VARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 VA + +RG + + + +++ D + A+++++ SPGG+ + Sbjct: 51 VAVVNMRGTLTKRGSWWTTGMEGVRTTVQQALDDPAVRAVLLAIDSPGGTVDGTRELADW 110 Query: 90 IQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I KP+ + SA Y I ++ + A +LVGS+GVL+ + +L+ Sbjct: 111 IAARVADGGKPIASYADGTMCSAAYWIGGSTGRVFAPAAALVGSVGVLWMHYDWSQYLET 170 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ + + KA +P + ++ Q ++D++Y F+ VS + Sbjct: 171 NGIRATYITAGSRKAAGAPEAPLSDNDKAYFQHLIDTAYTQFLDGVSAPMGLDRANPAAW 230 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 +DG+++ EA +GL+ + Sbjct: 231 ADGQVFRATEALALGLVTAI 250 >gi|260459549|ref|ZP_05807803.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] gi|259034351|gb|EEW35608.1| peptidase S49 [Mesorhizobium opportunistum WSM2075] Length = 302 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 23/233 (9%) Query: 33 DNSPHVARIAIRGQI----------EDSQELIERIERI----SRDDSATALIVSLSSPGG 78 D VA + I G I L+ R + D +A+++ + SPGG Sbjct: 56 DQRGSVAVLRIVGPILPRAEAVVDVSQPAALMTDFRRAFSQVANDAGVSAIVIDIDSPGG 115 Query: 79 SAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 I+ + P++ + +A SA Y I+ A++ IV + + VGSIGV Sbjct: 116 RVDLVPETAAMIRSARRDGRPIVAVANTIALSAAYWIASAADEIVVSPSGAVGSIGVYTV 175 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + L+ GV + + + P K E +PF ++ + + V + Y F V++ R Sbjct: 176 HEDMSAALEAEGVKVTMISAGPRKVEGNPFQPLDEAGLASLLGNVTTFYGMFAGDVAKGR 235 Query: 198 NIPYDKTLV--------LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGV 242 +P GR EA K+G++D V EE L G Sbjct: 236 GVPVSVVKADPESSDKNFGGGRAVLAQEALKLGMVDRVATLEETVARLAKGGK 288 >gi|213019344|ref|ZP_03335151.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995453|gb|EEB56094.1| putative minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 340 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 14/209 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V N A IAI G + +++ E+I + D S +I+ + SPG Sbjct: 27 VNQNIEKTAVIAIHGILTKKPGAFDVFLGMTSYEQIEEQITQALADSSIETIILEIDSPG 86 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + I + + +K +I ++ A SA Y I+ ++ + + TS VGSIGV+ Sbjct: 87 GEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSGVGSIGVIAS 146 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + F +K G+ +V + K + +P + ++++ +Q VD Y FV+L++ +R Sbjct: 147 HIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPMTSESLESLQKEVDRLYEMFVQLIARNR 206 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 N+ + ++ ++ G +A ++GL D Sbjct: 207 NLSIEAIKS-TEAGLYFGEKAVEIGLADG 234 >gi|23016403|ref|ZP_00056159.1| COG0616: Periplasmic serine proteases (ClpP class) [Magnetospirillum magnetotacticum MS-1] Length = 410 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 16/258 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVS 72 + S+ V S +A I + G + ++ + IE + D A+++ Sbjct: 46 APSADVAVTSDGIAIIPVIGTLVARSGYLGAASGLTAYSDIADTIEAAATDPGVRAILLD 105 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + S GG + IQ ++++ KP+ E A SA Y I+C ++ + +T VG Sbjct: 106 VDSSGGEVGGLFDLVDHIQAIRSQCGKPIWAVADEAALSAAYAIACTADRLYVTQTGEVG 165 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + + G++ V + K + +P ++ A M+Q VD+ Y F Sbjct: 166 SIGVVAVHRDESGADAQAGLAWSFVHAGAAKVDGNPHQPLSDSARAMLQADVDALYGKFT 225 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+E R + D ++ +++ G +A GL D VG L A SIR Sbjct: 226 TLVAERRCLSPDVVRA-TEAQVYRGDQAVTAGLADKVGTMRIALADLGATLARPSIRSPV 284 Query: 251 DWNPPKNYWFCDLKNLSI 268 P + ++ + Sbjct: 285 LSKPKETTMSEQTGDIPV 302 >gi|285017031|ref|YP_003374742.1| hypothetical protein XALc_0210 [Xanthomonas albilineans GPE PC73] gi|283472249|emb|CBA14755.1| hypothetical phage-related protein [Xanthomonas albilineans] Length = 433 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 22/239 (9%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 VA + I G + +Q L I+ + A+++ ++SPGG A Sbjct: 53 RDGVAVVPITGPVFRYANLFTEISGATSTQVLATDIQSALDNPYVRAIVLDINSPGGEAT 112 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + + I KP+ ASA Y + A++ IV +T+++GSIGV+ Y Sbjct: 113 GINELAKLIHAGSACKPIKAYAGGTMASAAYWLGAAADEIVIDDTAVLGSIGVVMSYLDT 172 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFS---EVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 K V + SS SP + +Q VD+ FV V+ RN Sbjct: 173 SARDAKSDVRRVEIVSSQ-----SPDKRVDPSTDEGRAKVQAQVDALADVFVAAVARYRN 227 Query: 199 IPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 D L G + GA+A K G+ D +G E V L P+ Sbjct: 228 TSTDTVLSDFGRGGVRVGADAVKAGMADRIGSLESVIAELAGSASHSKRTTNMSTTKPQ 286 >gi|325292902|ref|YP_004278766.1| peptidase S49 [Agrobacterium sp. H13-3] gi|325060755|gb|ADY64446.1| peptidase S49 [Agrobacterium sp. H13-3] Length = 372 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 108/239 (45%), Gaps = 15/239 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVS 72 + + + +++ VA I + G + D + + + + + + A+++ Sbjct: 50 ARAKEIAESTGSVAIIPVYGVLADKMDLFSAMSGGTSYAGIKKALHKALSNADIKAVVLD 109 Query: 73 LSSPGGSAYAGEAIFRAIQKVK-NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGG+ + + I+K++ KP+I +V+ +AASA Y I+ +++ IV + GS Sbjct: 110 IDSPGGTVPGTDELATEIRKLRGGEKPIIAQVNSLAASAAYWIAASTDEIVVTPSGRAGS 169 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV + + L++ G+ + + K E + + + +QD V+ SY+ FV Sbjct: 170 IGVYTAHDDLSAALEQRGIKRTYISAGKHKVEGNETEPLGKDTLAHVQDGVNRSYNRFVA 229 Query: 192 LVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V+E R + K GR++ G++D + +E A +R+I Sbjct: 230 SVAEGRGVTVSKVEDNFGQGRVFYAEALMDRGMVDRIATLDETLARYGADVEPAPVRRI 288 >gi|46580575|ref|YP_011383.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] gi|46449994|gb|AAS96643.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] Length = 406 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 10/200 (5%) Query: 38 VARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 VA + +RG + + + +++ D + A+++++ SPGG+ + Sbjct: 51 VAVVNMRGTLTKRGSWWTTGMEGVRTTVQQALDDPAVRAVLLAIDSPGGTVDGTRELADW 110 Query: 90 IQK--VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I KP+ + SA Y I ++ + A ++VGS+GVL+ + +L+ Sbjct: 111 IAARVADGVKPIASYADGTMCSAAYWIGGSTGRVFAPAAAIVGSVGVLWMHYDWSQYLET 170 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G+ + + KA +P + ++ Q ++D++Y F+ VS + Sbjct: 171 NGIRATYITAGSRKAAGAPEAPLSDNDKAYFQHLIDTAYTQFLDGVSAPMGLDRANPAAW 230 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 +DG+++ EA +GL+ + Sbjct: 231 ADGQVFRATEALALGLVTAI 250 >gi|298713144|emb|CBJ26900.1| putative periplasmic protease [Ectocarpus siliculosus] Length = 898 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 6/197 (3%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCAS 118 + + ++V L SPGG + ++K+R + V ++AAS GY+I+C + Sbjct: 564 AHGNTTTDEVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMIACIA 623 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + + A +++GSIGV+ L K GV S K+ PF EV + M Sbjct: 624 DELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQHKSLVGPFQEVTKENKAMQ 683 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 Q +D+ + F V R P + G IW G A + L D V + L Sbjct: 684 QKQMDAIHSAFKTHVHRYR--PSVDIEAVGTGEIWLGQRAVDMRLADKVTT---AMEYLQ 738 Query: 239 ALGVDQSIRKIKDWNPP 255 D + +K Sbjct: 739 GRMTDAQVFLVKPHKKK 755 >gi|91214231|ref|NP_918994.2| prohead protease ClpP [Burkholderia phage BcepNazgul] gi|88604924|gb|AAQ63361.2| prohead protease ClpP [Burkholderia phage BcepNazgul] Length = 434 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 12/215 (5%) Query: 35 SPHVARIAIRGQIEDSQE-----------LIERIERISRDDSATALIVSLSSPGGSAYAG 83 S +A I ++G + + + ++ DD +I+ ++S GG A Sbjct: 74 SNGLAIIPLQGTMINRFNYSFGYVTGYNFVRAQLNAALADDDVEGIILDVNSYGGEAAGC 133 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + I ++ KP++ + SA Y I+ A+ +V+ + GSIGV+ + + Sbjct: 134 FELADDIYAARDEKPIMAVIDSNCYSAAYAIASAATKVVSTPSGGAGSIGVVAMHVDMSE 193 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LD +G+ I + + K + +P+ ++ + +Q V++SY FV LV+ +R + K Sbjct: 194 MLDDMGIKITFIHAGDHKVDGNPYEALSKEVKASIQADVNASYDEFVSLVARNRGMDSQK 253 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + + + +A +GLID V + + + Sbjct: 254 VRD-TQAQTYRADDALNLGLIDAVAKPVDAVAAFF 287 >gi|294340242|emb|CAZ88614.1| putative phage minor capsid protein C [Thiomonas sp. 3As] Length = 307 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 16/216 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + +++ D + + + SPGGS Sbjct: 64 VAVIPVHGALVPRGNTMTACMGTSSYDRIGAQLDAALADPEVRQIALDIDSPGGSVQGAF 123 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + KP V+ A SA YL++ A + + + T VGS+GV+ + + Sbjct: 124 ELAGKI--AQATKPTTAIVNFNALSAAYLLASACDSVSVSSTGAVGSVGVVAMHRDLSGA 181 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 DK GV I +V K + + ++ A Q +Q VD ++ FV VS RN+P D+ Sbjct: 182 NDKAGVKITAVYRGDKKLHGASHAPLSEVAQQELQAQVDDAFDQFVAAVSTHRNLPADRV 241 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + L ++ GA+A GL D + +E L L Sbjct: 242 VGL-QAGVFHGADALSQGLADQMETPQEAIDRLAGL 276 >gi|299145691|ref|ZP_07038759.1| putative signal peptide peptidase SppA [Bacteroides sp. 3_1_23] gi|298516182|gb|EFI40063.1| putative signal peptide peptidase SppA [Bacteroides sp. 3_1_23] Length = 304 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 12/231 (5%) Query: 35 SPHVARIAIRGQI--------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 VA I ++G + + E+ E + + + + +++ + S GGS A + Sbjct: 72 QDSVAIIGLQGSMLKYGSYCSYGTTEVAEMVNQAADSPKISGILLDIDSGGGSVDAIAPL 131 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET--SLVGSIGVLFQYPYVKPF 144 AIQ + +K + ++ ASA Y ++C + I+A+ T S GSIGV+ +P + Sbjct: 132 VDAIQYAQKKKKCVVAYCDLCASAAYYVACYCDEIIASNTISSEFGSIGVMMSFPDYAKY 191 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYD- 202 + +GV + ++ S+ + PF ++ + +D F V R + Sbjct: 192 YENVGVKVHTIYSNLSSYKNGPFEAAKEGKYDAIKTEELDPLARGFQEAVKNKRGSKLNL 251 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +T + GR++ +AK+ GLID VG ++ + L D + + + Sbjct: 252 ETEGIIAGRMFYANDAKENGLIDSVGTRDFALGRVRELRRDAYVNEYINSK 302 >gi|307944694|ref|ZP_07660033.1| peptidase S49 [Roseibium sp. TrichSKD4] gi|307772121|gb|EFO31343.1| peptidase S49 [Roseibium sp. TrichSKD4] Length = 428 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 16/221 (7%) Query: 34 NSPHVARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSA 80 S VA I + G + + L+E +E A+++ + GG + Sbjct: 70 TSEGVAVIRVSGALSRTSRGWHRECGYMSYPALLETVEEAVTHPGVKAVLLEIDCYGGPS 129 Query: 81 YAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 E RA++ + KP+ ++E A SAG+ I A++ I A T L GSIGV+ Sbjct: 130 QGLEDTARAMRDAAEQSGKPLWAHINEAALSAGFGIGSAASEISIARTGLAGSIGVIAMV 189 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 V +K GV K+ K + SPF+ ++ A +Q VD F ++V++ R Sbjct: 190 QDVSGAAEKSGVKYHVFKAGAAKDDASPFTAMSEDAAARIQADVDGMNDDFCQMVADHRG 249 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D L +I+ G +A GL+D + ++ L A Sbjct: 250 MKKDAVAGL-QAQIFRGEKAVAAGLVDQMEPMRDMLARLTA 289 >gi|328545661|ref|YP_004305770.1| peptidase S49 [polymorphum gilvum SL003B-26A1] gi|326415401|gb|ADZ72464.1| Peptidase S49 [Polymorphum gilvum SL003B-26A1] Length = 439 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 16/221 (7%) Query: 34 NSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSA 80 P +A + I G + D E+ +E D + A++V + SPGG Sbjct: 54 TDPGIAVVPILGPLVTRGDWLTSLLGASDYGEVASAVEAALADPTVRAVLVEIDSPGGEV 113 Query: 81 YAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + + ++ +KP+ E A SA + I+ ++ + T+ VGSIGV+ + Sbjct: 114 GGLFDLVDRLVSLRQDAQKPLWAVASESALSAAFAIASVADRLYVTRTAEVGSIGVVAIH 173 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 G+ V + K E + + ++ A+ +Q VD+ + V LV+ +RN Sbjct: 174 VDESVADVMAGLKWTLVHAGDRKIEGNAHAPLSDTALSAIQADVDALHADLVTLVARNRN 233 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D ++ I+ G GL D +G + L Sbjct: 234 MSPDAVRA-TEAAIYRGQRGIGAGLADKLGTVDLALVDLAR 273 >gi|114327168|ref|YP_744325.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] gi|114315342|gb|ABI61402.1| signal peptide peptidase sppA [Granulibacter bethesdensis CGDNIH1] Length = 270 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 9/217 (4%) Query: 38 VARIAIRGQIE-----DSQELIERIERISR-DDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + ++G + + + I + + + ALI+S+ SPGGS + I I+ Sbjct: 20 IPVLELKGILSRRGPLSFETVEPAIRKAAALAEKRGALILSIDSPGGSPVQSDQIAALIR 79 Query: 92 KVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 + K V + E+ AS GY ++CA++ I+A+ S+VGSIGV+ + +++LG Sbjct: 80 REAEEKSFRVYAVIQEVGASGGYWLACAADEIMASPMSIVGSIGVVGGGFGLNRLIERLG 139 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLS 208 + + + K PF P+ V + +++ + F V + R + Sbjct: 140 IDRRLHTAGQNKRRGDPFLPEKPEDVAFIAGLMEDIHASFKDWVRQRRGARLTSDESAIF 199 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 DG G +A +GLID + + + L G Sbjct: 200 DGGYMLGRQAVTLGLIDGLTDLTALVEQLGGKGAQPK 236 >gi|152981575|ref|YP_001354459.1| hypothetical protein mma_2769 [Janthinobacterium sp. Marseille] gi|151281652|gb|ABR90062.1| phage-related protein [Janthinobacterium sp. Marseille] Length = 435 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%) Query: 38 VARIAIRGQ-------IEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I + G IE + E+ R++ D +++ L SPGG A Sbjct: 58 IAVIPVVGTLVRRSMGIEAASGLMSYGEIEARLDAALADPQVAGILLDLDSPGGEASGVF 117 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ KP+ ++ A SA + I+ A + ++T+ VGSIGV+ + Sbjct: 118 ELAERIRAASTIKPIWAHANDAAYSAAFAIAAACQRLTLSQTAGVGSIGVIALHVDQSVK 177 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K G++ +V + K + SP ++P+A+ +Q VD Y FV V + R + D Sbjct: 178 DAKDGLNYTAVFAGSHKNDFSPHEPLSPQAITALQTEVDRLYDIFVNQVGQMRGLDPDAV 237 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 G + G +A GL D V + V Sbjct: 238 RATEAGLFY-GEQAVAAGLADAVMPFDAVMTE 268 >gi|222148703|ref|YP_002549660.1| Periplasmic serine proteases (ClpP class) [Agrobacterium vitis S4] gi|221735689|gb|ACM36652.1| Periplasmic serine proteases (ClpP class) [Agrobacterium vitis S4] Length = 306 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 14/215 (6%) Query: 36 PHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++A I + G + Q L ++ + ++ S GG Sbjct: 84 DNIAIIPVEGSLVHKGGWVGSASGETSYQGLQAQVAAARKYAGVKGVVFEYDSYGGEVNG 143 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G A+Q + KP + + + A SAGYL++ + IV E GSIGV+ + Sbjct: 144 GFETAAAMQALSREKPTLAILTDFAYSAGYLLASQARGIVMPEFGGAGSIGVIIMHADYS 203 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L++ G+ + ++S KA+ +P+ ++ Q D F V++ R Sbjct: 204 QALEQDGIKVTIIRSGKKKADGNPYEPLSADVADRWQAQADQMRDKFAETVAKGRKNRIT 263 Query: 203 KTLVLS-DGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 K L+ + ++ +A +GL+D +G E + + Sbjct: 264 KAKALASEADVYDAKQALSMGLVDAIGDPIEAFDA 298 >gi|213618610|ref|ZP_03372436.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 203 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 S GY IS +N IVA+ ++L GSIG+ V+ L +GV V +SP+ S Sbjct: 1 SGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SMTK 59 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVG 228 ++P+ QMMQ ++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G Sbjct: 60 ALSPEVQQMMQLSIEYGYKRFITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLG 119 Query: 229 GQEEVWQSLYALGVDQS-IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 ++ L + P D S+ ++L + I M + Sbjct: 120 DFDDAVAKAAELAKLKQWHLDYYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPAPL 176 >gi|90423538|ref|YP_531908.1| peptidase S49 [Rhodopseudomonas palustris BisB18] gi|90105552|gb|ABD87589.1| peptidase S49 [Rhodopseudomonas palustris BisB18] Length = 262 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 7/212 (3%) Query: 38 VARIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 VA + +RG+I S Q+L+ + +++ + A ALI++L + GG+ E I + + Sbjct: 17 VAVLRLRGEIAVSSAMIQDLLNVLPQLTPQEHA-ALIITLETAGGTLTCAENIMGWVDHL 75 Query: 94 --KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + PVI + E SAG I+ + ++A ++++G+ GV+ +P +LG+ Sbjct: 76 YRRLSCPVIAVIEERCLSAGLAIAACCDHVIAQPSAMIGAFGVMMTWPGENRLRAQLGLL 135 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K++ +K SP + + V+ + F L+ + R I + + DGR Sbjct: 136 ATVYKTTALKDFGSPHRAPTAEDDAAIHSVLQDIHGQFAELIRDRRGIGGGEIDEIFDGR 195 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 + TG A ++GL+D +GG E Q L A GV Sbjct: 196 LITGRRALEIGLVDQLGGFETALQWLNANGVS 227 >gi|323953763|gb|EGB49573.1| peptidase S49 [Escherichia coli H263] Length = 264 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 13/168 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 L + GV I + S K + + F + + Q MQ +D++ F Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEK 245 >gi|46581275|ref|YP_012083.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] gi|46450696|gb|AAS97343.1| minor capsid protein C [Desulfovibrio vulgaris str. Hildenborough] gi|311234940|gb|ADP87794.1| peptidase S49 [Desulfovibrio vulgaris RCH1] Length = 439 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 4/192 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI--QKVKNRKPVITEVHEMAA 108 ++ I D A+++ ++SPGG+ + + I ++ K KP+ + + A Sbjct: 99 DQIRPAIASALADRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMA 158 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y+I A+ ++A T+ VGSIGV+ Y + +K G+S + + KA +P + Sbjct: 159 SAAYMIGSATGRVLAPATATVGSIGVISVYENWSKWNEKAGLSYAYLTAGQWKAVGNPDT 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV- 227 + +Q+ + + Y F VS S + +DG+++ +EA + GL+ + Sbjct: 219 PLADNERAYLQERLTALYRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQ-GLVTAIV 277 Query: 228 GGQEEVWQSLYA 239 +E +L Sbjct: 278 ADREAAIATLAK 289 >gi|46578615|ref|YP_009423.1| minor capsid protein C, degenerate [Desulfovibrio vulgaris str. Hildenborough] gi|46448026|gb|AAS94682.1| minor capsid protein C, degenerate [Desulfovibrio vulgaris str. Hildenborough] Length = 439 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 4/192 (2%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAI--QKVKNRKPVITEVHEMAA 108 ++ I D A+++ ++SPGG+ + + I ++ K KP+ + + A Sbjct: 99 DQIRPAIAAALADRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMA 158 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA Y+I A+ ++A T+ VGSIGV+ Y + +K G+S + + KA +P + Sbjct: 159 SAAYMIGSATGRVLAPATATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNPDT 218 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV- 227 + +Q+ + + Y F VS S + +DG+++ +EA + GL+ + Sbjct: 219 PLADNERAYLQERLTALYRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQ-GLVTAIV 277 Query: 228 GGQEEVWQSLYA 239 +E +L Sbjct: 278 ADREAAIATLAK 289 >gi|145591098|ref|YP_001153100.1| peptidase S49 [Pyrobaculum arsenaticum DSM 13514] gi|145282866|gb|ABP50448.1| peptidase S49 [Pyrobaculum arsenaticum DSM 13514] Length = 552 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 107/268 (39%), Gaps = 24/268 (8%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + P + + I ++ S +I + +++ +++ ++SPGG+ A E Sbjct: 34 GQTPAAPPKPKIVLVPIDFVLDSSPVDGVIRDLVSLAQRKDVAGVVLVINSPGGTVSATE 93 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 A++ A+ + K V+ +AAS Y ++ A+ I A +S VGSIGV+ + F Sbjct: 94 ALYSALAGLNKTK--YAVVNGLAASGAYYVAMAAEKIYATPSSWVGSIGVVAVMWPDEYF 151 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 D + + P+K E+ + ++ FV+ V R Sbjct: 152 YD---IPDYVYTTGPLKYYG---KELTD-----YYNDIERVRMNFVQAVLRGRAGRIKAD 200 Query: 205 LVLS-DGRIWTGAEAKKVGLIDVVGGQEEVWQSLY-ALGVDQSIRKIKDWNPPKNYWFCD 262 + I+T +A ++GL+D VGG + + + LG +K++ + Sbjct: 201 PQVFETAAIFTAEDALRLGLVDAVGGVFDAVRDMAQRLG-------LKEYEVKFLRELGN 253 Query: 263 LKNLSISSLLEDTIPLMKQTKVQGLWAV 290 ++ D LM T V + + Sbjct: 254 ASASPAAAFRVDLERLMNSTPVPIFYIL 281 >gi|225155745|ref|ZP_03724233.1| Periplasmic serine protease (ClpP class)-like protein [Opitutaceae bacterium TAV2] gi|224803539|gb|EEG21774.1| Periplasmic serine protease (ClpP class)-like protein [Opitutaceae bacterium TAV2] Length = 282 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 18/218 (8%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I + G I ++++ I + ++++++SPGG+ Sbjct: 63 IAEIPVFGPIGKGLGSFEKSCGATSTEDVANDITEALGRRDVSGILLNINSPGGTTTGVP 122 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + AI + KPV+ + ASA Y + +++IVA++++ VGS+GV + Sbjct: 123 ELASAIARAAENKPVVAFTDSLMASAAYWLGSQADMIVASKSASVGSVGVYIPFLDSSRR 182 Query: 145 LDKLGVSIKSV--KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + +G+ + V K +K P + + + +Q D + F + R D Sbjct: 183 AEMMGLKVDVVKNKEGTLKGMGIPGTSLTEAQREHLQQRADEIFSMFKGDIKSRRPGVKD 242 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + L G+ A +++ GLID +G + SL AL Sbjct: 243 EALR---GQTLLAAGSRETGLIDDIGDIQHARASLAAL 277 >gi|260576715|ref|ZP_05844701.1| peptidase S49 [Rhodobacter sp. SW2] gi|259021082|gb|EEW24392.1| peptidase S49 [Rhodobacter sp. SW2] Length = 458 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 14/206 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I + G + + + ++ D + + + + S GG Sbjct: 85 IAVIEVSGVLVHRGAWIGQSSGQTSYEGIAAQLAAAVTDPAVRGIALEIDSFGGEVAGVF 144 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + AI+ + KPV V E A SAGY ++ + I+ T VGSIGV+ + + Sbjct: 145 DLADAIRAARTAKPVQAFVAEHAFSAGYALASQATSIILPRTGAVGSIGVVVMHADLSGQ 204 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP-YDK 203 L GV++ + S K + +P++ + +Q +DS F + VS R + Sbjct: 205 LADDGVTVTLIHSGAHKVDGNPYAPLPDPVRARIQGEIDSLRTLFAQTVSAGRGRRLTAE 264 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGG 229 + ++ + GAEA GL D V Sbjct: 265 AALATEAECYRGAEAVAAGLADEVSD 290 >gi|77919415|ref|YP_357230.1| periplasmic serine proteases [Pelobacter carbinolicus DSM 2380] gi|77545498|gb|ABA89060.1| protein C, Serine peptidase, MEROPS family S49 [Pelobacter carbinolicus DSM 2380] Length = 383 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 17/230 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 A I I+G + + L + DD+ +I + SPGG Sbjct: 64 TAIIGIQGTLVHKSGYLDALSGLSSYESLRSSFDLALEDDAVRRIIFDVDSPGGEVTGCF 123 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + + +KP+ V+E SA Y ++ A++ I+ T GSIGV+ + F Sbjct: 124 DLADHIYQSRGKKPITAVVNESCYSAAYALASAADKIILPRTGGAGSIGVILAHVDQSGF 183 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +K G+++ + + KA+ SP ++ +A +Q +V+ +Y FV VS +RN+ + Sbjct: 184 NEKNGLAVTHIFAGAHKADFSPHHALSEEAKTRLQGMVNETYSLFVSTVSRNRNMSAEAV 243 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 ++ I+ G++A GL D V + + L G + +++ P Sbjct: 244 RK-TEACIYIGSKAVAAGLADQVAAVD---RYLSGSGGSSTPLRMEAAEP 289 >gi|326404357|ref|YP_004284439.1| putative peptidase S49 [Acidiphilium multivorum AIU301] gi|325051219|dbj|BAJ81557.1| putative peptidase S49 [Acidiphilium multivorum AIU301] Length = 265 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 98/255 (38%), Gaps = 15/255 (5%) Query: 34 NSPHVARIAIRGQIE------DSQELIERIERISR--DDSATALIVSLSSPGGSAYAGEA 85 + P V I + G I + + I+R LI+++ SPGGS + Sbjct: 8 SRPCVPVIRLAGLISPREGAVNLERFAPAIDRGFDLAKGGTKLLILAIESPGGSPVQSDL 67 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I R I++ V+ + ++ AS GY I+CA + I A S+VGSIGV+ + Sbjct: 68 IGRHIRRKAEETGVRVLAVIGDVGASGGYWIACAGDEIFANPMSIVGSIGVVGGGFGLHD 127 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + + G+ + V + K PFS P Q ++D + F V E R Sbjct: 128 LIRRFGIERRVVTAGANKLRNDPFSPERPGDAAFNQALLDDIHDAFKAWVRERRGAALKG 187 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + DG G+ AK GLID G + G K P + + L Sbjct: 188 DDTVFDGSYMLGSAAKARGLIDGFGDVRGLIT-----GRCGPRAKPVFLGPKRKFSLLRL 242 Query: 264 KNLSISSLLEDTIPL 278 S L + + Sbjct: 243 FGRSSLIELANAMEA 257 >gi|83945138|ref|ZP_00957487.1| putative proteinase IV [Oceanicaulis alexandrii HTCC2633] gi|83851308|gb|EAP89164.1| putative proteinase IV [Oceanicaulis alexandrii HTCC2633] Length = 554 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 100/277 (36%), Gaps = 33/277 (11%) Query: 36 PHVARIAIRGQIEDS--------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +VA I I G + ++ + + + D+ A+++ +PGG Sbjct: 92 DNVALIEIEGVLMSRGFEGVWSGCYWPGYRDYVAAVRAANEDERVDAILLRFDTPGGYVA 151 Query: 82 AGEAIFRAIQKVKNR---KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 +A++ + KP++ E+ ASAG ++ + + A++ ++VGS+GV + Sbjct: 152 GCAEAAQALRNLNQSNGGKPLVGHADELCASAGMKLAAQCDGLFASDGAMVGSVGVRIGF 211 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + L+K G KS +K SP + + Q VD F ++ R Sbjct: 212 FDFEGALEKWGERYHVYKSGRLKDMGSPLRAPTDEESAIYQAEVDHLADRFYVELALGRG 271 Query: 199 IPYDKTLVL--SDGRIWTGAE----------AKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + + + R +T + A LID V +E + +L + Sbjct: 272 LDLEAVRESRGWEARTFTAGDPPPPAELDPLAVD--LIDAVMTEEAAFAVAQSLAGTPAA 329 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 + NP + ++P Q + Sbjct: 330 --VNPPNPVSVSAAASRAASCDEAASARSVPPAGQLE 364 >gi|219121417|ref|XP_002185933.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582782|gb|ACI65403.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 165 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 2/165 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI--TEVHEMAASAGYLISCASNIIVAAET 126 +I+S++SPGGS + I+++ N + V AAS GY+I+ ++ IVAA Sbjct: 1 VILSVNSPGGSVASYGLASAQIERLANVVGITTTACVDRYAASGGYMIASQAHRIVAAPF 60 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + VGS+GV+ + + GV +K+ K + F V+ + ++ + ++ + Sbjct: 61 ASVGSVGVIMEGLNFHDLAKRYGVQPMILKAGNEKNPLTTFGSVSKQDLKHETERLEKVH 120 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQE 231 F +LV R DK +++G ++ G EA ++GL+D V + Sbjct: 121 DAFRQLVVRGRPELADKLDEVANGNVFLGLEAVELGLVDAVMTSD 165 >gi|148260959|ref|YP_001235086.1| peptidase S49 [Acidiphilium cryptum JF-5] gi|146402640|gb|ABQ31167.1| peptidase S49 [Acidiphilium cryptum JF-5] Length = 265 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 98/255 (38%), Gaps = 15/255 (5%) Query: 34 NSPHVARIAIRGQIE------DSQELIERIERISR--DDSATALIVSLSSPGGSAYAGEA 85 + P V I + G I + + I+R LI+++ SPGGS + Sbjct: 8 SRPCVPVIRLAGLISPREGAVNLERFAPAIDRGFDLAKGGTKLLILAIESPGGSPVQSDL 67 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I R I++ V+ + ++ AS GY I+CA + I A S+VGSIGV+ + Sbjct: 68 IGRHIRRKAEETGVRVLAVIGDVGASGGYWIACAGDEIFANPMSIVGSIGVVGGGFGLHD 127 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + + G+ + V + K PFS P Q ++D + F V E R Sbjct: 128 LIRRFGIERRIVTAGANKLRNDPFSPERPGDAAFNQALLDDIHDAFKAWVRERRGAALKG 187 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 + DG G+ AK GLID G + G K P + + L Sbjct: 188 DDTVFDGSYMLGSAAKARGLIDGFGDVRGLIT-----GRCGPRAKPVFLGPKRKFSLLRL 242 Query: 264 KNLSISSLLEDTIPL 278 S L + + Sbjct: 243 FGRSSLIELANAMEA 257 >gi|15789821|ref|NP_279645.1| proteinase IV-like protein [Halobacterium sp. NRC-1] gi|169235542|ref|YP_001688742.1| proteinase IV [Halobacterium salinarum R1] gi|10580211|gb|AAG19125.1| proteinase IV homolog [Halobacterium sp. NRC-1] gi|167726608|emb|CAP13393.1| proteinase IV [Halobacterium salinarum R1] Length = 300 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 22/232 (9%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW----SSHVEDNSPHVARIAIRGQIEDS--QELIERIER 59 K + T + + +V V S VA + I I + + + Sbjct: 10 KTLATSWTFIIVVAAIVGGVGGVALQSGSDSGPENSVAVVNIESAITGGTGDAVAKELRS 69 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 I +DS A+++ +SSPGG+ E +RA++++ KPV+T V AAS GY ++ Sbjct: 70 IRGNDSIDAVVLRVSSPGGAVSGSEVQYRAVKRLAQEKPVVTSVRGPAASGGYYTIAPTD 129 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I +SLVGS+GV+ + GV + KS+P K P + +A Q Sbjct: 130 KIYVTPSSLVGSVGVISS------VSENNGVPSR-WKSAPDKGTTGPADKARARAATFRQ 182 Query: 180 DVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 F+ +V R + +I+ G +A ++GL D +GG Sbjct: 183 S--------FLDVVMNERGDDLTVDRETIGRAQIYAGNKAVEIGLADEIGGL 226 >gi|189022207|ref|YP_001931940.1| peptidase S49 [Vibrio nigripulchritudo] gi|160334219|gb|ABX24532.1| putative peptidase S49 [Vibrio nigripulchritudo] Length = 434 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 28/278 (10%) Query: 29 SHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSS 75 S + + VA I + G I ++ L + + S A+I+++ S Sbjct: 49 SQITEMRDGVAIIHVNGVISRYANLFHAVCGGVSTEVLAKEFNAAINESSVKAVILNVDS 108 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG A + I + +KPV V SA Y I+ A + + T+ VGSIG + Sbjct: 109 PGGEASGIHELSEMIHASRGKKPVRAYVGGDGCSAAYWIATACDRVTMDATARVGSIGTV 168 Query: 136 FQYPYVKPFLDKLGVSIKSVKS-SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + VK + + V S SP K + + +Q +D+ F+ V+ Sbjct: 169 VSF--VKRPDAEGSKRFEFVSSQSPNKR----LDPESEQGQTAIQTQLDAMADVFISRVA 222 Query: 195 ESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD-- 251 + + DK G + G +A G+ +G E + SL + G +QS ++ Sbjct: 223 RNMGVTSDKVKSDFGQGGVKIGQQAVDAGMAHELGSLEALIASL-SNGKNQSTTASRNTK 281 Query: 252 --WNPPKNYWFC--DLKNLSISSLLEDTIPLMKQTKVQ 285 NP ++W D SI + L + P + Q Sbjct: 282 TQHNPNASHWLALDDTSPESIINALREQYPDALASFEQ 319 >gi|289582290|ref|YP_003480756.1| peptidase S49 [Natrialba magadii ATCC 43099] gi|289531843|gb|ADD06194.1| peptidase S49 [Natrialba magadii ATCC 43099] Length = 328 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 19/217 (8%) Query: 37 HVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 VA I + I ++ ++ + ++S A+++ + SPGG A E ++ A+ + Sbjct: 47 TVAVIEVDQSITEASAADITADLAEARENESIDAVVLDVDSPGGGVTASEQLYLAVDRTA 106 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 PV+T V M S Y +S ++ + + +S VGSIGV + P Sbjct: 107 AEMPVVTSVQSMGTSGAYYMSAPTDEMYVSPSSTVGSIGVRATHLDSPPMDG-------E 159 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIW 213 V + P K + ++D + F+ V E R + LS +++ Sbjct: 160 VTTGPDKGSMT---------ADQVKDQTEQMKQTFLGSVLEHRGDELELTERELSYAKVY 210 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 G EA + GL D +G E + ++ Sbjct: 211 IGTEAVENGLADEIGDTEVAIGAAADRAGLDDYEVVR 247 >gi|330946509|gb|EGH47542.1| putative inner membrane peptidase [Pseudomonas syringae pv. pisi str. 1704B] Length = 189 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 2/144 (1%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K + + + + Sbjct: 6 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTA 65 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 K + F E K + Q +D ++ F V+ R P ++ G +W G Sbjct: 66 GEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVATGEVWLGMA 123 Query: 218 AKKVGLIDVVGGQEEVWQSLYALG 241 A L+D + +E Sbjct: 124 AVDKLLVDELKTSDEYLAERAKDA 147 >gi|58698082|ref|ZP_00373006.1| hypothetical protein WwAna1566 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630941|ref|YP_002727732.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|58535439|gb|EAL59514.1| hypothetical protein WwAna1566 [Wolbachia endosymbiont of Drosophila ananassae] gi|225592922|gb|ACN95941.1| minor capsid protein C, putative [Wolbachia sp. wRi] Length = 360 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 14/227 (6%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V ++ + I I G + +++ E IE D+ +I+ + SPG Sbjct: 35 VRNSERGIKVIPIHGILTKKSEAFDDVLGMTSYEKIREEIEEALIDEEVETIILDIDSPG 94 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + + I + + K ++ ++ A SA Y I+ ++ ++ TS VGSIGV+ Sbjct: 95 GEVNSLFDLSDFIYEARGLKKIVAIANDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIAS 154 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + F +K G+ +V + K + +P + ++++ +Q+ V Y FV LV+ +R Sbjct: 155 HIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPITSESLESLQEEVGRLYEMFVELVARNR 214 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 N+ + ++ ++ G +A ++GL D V E + + Sbjct: 215 NLSTETIKS-TEAGLYFGEKAIEIGLADEVITYSEFIDRRNNMSKAE 260 >gi|255029400|ref|ZP_05301351.1| U7 family peptidase [Listeria monocytogenes LO28] Length = 131 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 69/118 (58%) Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 A++ +L GS+GV+ Q + KLGVS ++KS K S + ++MQ + Sbjct: 11 FASKETLTGSLGVIMQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKIMQSM 70 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 +D SY+ FV++V++ R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 71 IDDSYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKK 128 >gi|330902693|gb|EGH33708.1| putative inner membrane peptidase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 193 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%) Query: 90 IQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K Sbjct: 1 MARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKH 60 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + K + F E K + Q +D ++ F V+ R P ++ Sbjct: 61 DIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVA 118 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 G +W G A L+D + +E Sbjct: 119 TGEVWLGMAAVDKLLVDELKTSDEYLAERAKDA 151 >gi|269975292|gb|ACZ55516.1| prohead protease ClpP [Staphylococcus phage SA1] Length = 438 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 13/214 (6%) Query: 35 SPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYA 82 S +A I I G + + + + D A+I ++S GG A Sbjct: 75 SNGLAIIPIHGTLINRYGGYYYGYVTGYNFIRSQRNAALADPDVEAIIYDVNSNGGEAAG 134 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 + + + + KP + V SA Y ++ A++ IV + GSIGV+ + + Sbjct: 135 CFELSQEMFDTRGEKPSLAVVDSNCYSAAYALASAADKIVVTPSGGAGSIGVIALHIDMS 194 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L +G+++ +KS KA+ +P+ ++ + Q VDS FV LV+++R++ Sbjct: 195 KMLADIGITVNIIKSGEHKADGNPYEPMSDEVRADWQASVDSMRTDFVNLVAQNRDLDPK 254 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ + EA +GLID V + Sbjct: 255 VVRD-TEAMCYNAGEAMSIGLIDAVSTPSKAVTE 287 >gi|186476640|ref|YP_001858110.1| peptidase S49 [Burkholderia phymatum STM815] gi|184193099|gb|ACC71064.1| peptidase S49 [Burkholderia phymatum STM815] Length = 292 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 14/215 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + D A+++S+ SPGG Sbjct: 76 VAVIDVSGTLVQKSSNLRPYSGMLGYNAIRHNFLAALDDKKVKAIVLSIDSPGGEVAGCF 135 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + ++ KP + ++E SA Y ++ A I T GS+GV+ + Sbjct: 136 DLADLIYESRSVKPTLAILNESGYSAAYALASACEQITVPRTGGTGSVGVICMHVDQSKA 195 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +DK G+++ +K KA+ + F+ ++ +A+ Q VD FV+ V+ +RN+ D Sbjct: 196 IDKAGLTVTIIKYGDRKADGNQFNPLSKEALDRYQAEVDEMGELFVQTVARNRNLSADVV 255 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + GA ++G D V +E ++SL Sbjct: 256 RK-TQATTFLGAAGVEIGFADAVMAPDEAFRSLLK 289 >gi|134297328|ref|YP_001121063.1| peptidase S49 [Burkholderia vietnamiensis G4] gi|134140485|gb|ABO56228.1| protein C, Serine peptidase, MEROPS family S49 [Burkholderia vietnamiensis G4] Length = 412 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 14/212 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + E+ ++ D + +++ + SPGG A Sbjct: 59 IAVIPIHGSLVKRSLGMEAASGLTSYGEIAAMLDSALADPQVSGILLDIDSPGGEASGSF 118 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + R +++V KPV ++ A SA Y I+ ++ + ET VGSIGV+ + Sbjct: 119 ELARRVREVAAMKPVWAVANDAAYSAAYAIAASAQRLFVTETGGVGSIGVIALHVDQSVK 178 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K G ++ + K + SP ++ A +Q VD Y F V+ R++ D Sbjct: 179 DAKDGYRFTAITAGAHKNDYSPHEPLSDAAKTELQGEVDRLYSIFTEHVAAMRDLDVDAV 238 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 ++ ++ G+ A GL D + E Sbjct: 239 RA-TEAGLFFGSNAVAQGLADGLQTLEVTLSE 269 >gi|110668686|ref|YP_658497.1| protease IV; endopeptidase IV; signal peptide peptidase [Haloquadratum walsbyi DSM 16790] gi|109626433|emb|CAJ52894.1| Protease IV; endopeptidase IV; probable signal peptide peptidase [Haloquadratum walsbyi DSM 16790] Length = 328 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 13/220 (5%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYA 82 S S E VA I RG + E + + S A+++ + SPGG A Sbjct: 36 VSGSGPDEGGESSVAVITFRGGTTSGNVAAVTESLREARTNGSVDAIVLRIDSPGGPVDA 95 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 E + A+ + ++ PV+ V AAS GY + IV +S VGSIGV+ Q P + Sbjct: 96 SEEFYLAVNRTASQMPVVAYVEGTAASGGYFGIAPVDEIVVKPSSTVGSIGVIVQAP-LS 154 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + ++S P KA+ + +++ ++ FV + + R Sbjct: 155 AVENIENQRQVFIRSGPDKAQIT---------RDGLRENLELLQKAFVDTIIKHRGDELS 205 Query: 203 KTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + ++ G+ + G A G D +G + Sbjct: 206 LSRTEVATGQTFLGPRAVDNGFADQIGDLNVAIEEAAGRA 245 >gi|163796778|ref|ZP_02190736.1| Periplasmic serine protease [alpha proteobacterium BAL199] gi|159178032|gb|EDP62579.1| Periplasmic serine protease [alpha proteobacterium BAL199] Length = 425 Score = 159 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 25/277 (9%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 P +A + + G + ++ +++E + +++ L +PGG A Sbjct: 55 EPGIAVVPVLGTLVRRSSYLAAASGLTAYADIGDKVEAVLSSADVRGVLLELDTPGGEAG 114 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + +++ KP+ E A SAGY I+ + I T+ VGSIGV+ + Sbjct: 115 GVFDLADRLSELQRASGKPIWAIADEAALSAGYAIASVAEQIWLTRTAEVGSIGVVAVHV 174 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G++ V + K + SP ++ A +Q VD+ FV LV+ +R I Sbjct: 175 DQSAADRQAGLAYSFVHAGAHKIDGSPHLPLSDSARARIQADVDALNDAFVDLVARNRGI 234 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWNPPKNY 258 ++ + G A GL D +G + V + LG +SI + + Sbjct: 235 TAIVIRQ-TEAATFRGERAVAAGLADRIGNFDAVLTAFAERLGRPRSIAARAFPHVKETP 293 Query: 259 WFCDLKN--------LSISSLLEDTIPLMKQTKVQGL 287 L L + ++E + P++ GL Sbjct: 294 MKTGLPEQPPAGADALEPAMIVETSAPVVSAAADAGL 330 >gi|255088643|ref|XP_002506244.1| predicted protein [Micromonas sp. RCC299] gi|226521515|gb|ACO67502.1| predicted protein [Micromonas sp. RCC299] Length = 342 Score = 159 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 11/230 (4%) Query: 34 NSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + PHV + G + SQ E + + R ++ +++ L++ GG+ Sbjct: 5 DKPHVFVLQFFGDVRASQASNLREEVTAVLRSAKKSRGDEVVLVLNTGGGTVTGYGLAAA 64 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + ++K+ + V ++AAS GY+++C ++ +VA+ +++GSIGV+ + P V L K Sbjct: 65 QLTRLKDAGIKLTICVEQVAASGGYMMACTADRLVASPFAVLGSIGVISEIPNVYERLKK 124 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 GV ++V + K +P ++ V+ + ++ F V + R P + Sbjct: 125 EGVEFQTVTAGKFKRTLTPTKKIEKADVEKSKADIEDVLTLFKTFVKQQR--PKLVIDEV 182 Query: 208 SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + G W GA+A K L D + ++V L A G + I +K + PP++ Sbjct: 183 ATGETWFGADALKRDLCDELKTTDDVLLELLAAG--REIFSVK-YRPPQS 229 >gi|224011339|ref|XP_002295444.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583475|gb|ACI64161.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 384 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 11/215 (5%) Query: 35 SPHVARIAIRGQIEDSQELI--ERIER--ISRDDSATALIVSLSSPGGSAYAGEAIFRAI 90 +A + I+D+ + E + +++ L SPGG+ + Sbjct: 87 KDIIATVDENAPIDDATTSLSTEELRDKPQYATPKVEVIVL-LESPGGAVSNYGLASSHL 145 Query: 91 QKVKNR--KPVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLD 146 Q++++ + V +AAS GY+++C S+ + A ++VGSIGV+ Q V+ L+ Sbjct: 146 QRLRSTPGVKLTICVDTVAASGGYMMACMSSPGQLYCAPFAMVGSIGVIGQSLNVQKTLE 205 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K GV + MK EV + + MQD+VD + F V+ +R + Sbjct: 206 KYGVRPYVFRGGTMKNPVGMVGEVTKEGIGHMQDMVDRIHDAFREHVANARENSHHD--G 263 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 +S G ++ G +A K+GL+D + +E G Sbjct: 264 ISTGDVFIGMQALKLGLVDRLITSDEYIAERIQDG 298 >gi|146340583|ref|YP_001205631.1| hypothetical protein BRADO3628 [Bradyrhizobium sp. ORS278] gi|146193389|emb|CAL77405.1| conserved hypothetical protein; putative peptidase S49 domain [Bradyrhizobium sp. ORS278] Length = 289 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 3/172 (1%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +I+ + SPGG+ A+ + RKP + V+ +AASA Y I+ ++ IV ++ Sbjct: 98 IILDVDSPGGTVAGTAEAAAAVAEAAQRKPCVACVNTLAASAAYWIASQASEIVMTPSAD 157 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 VGSIG + + L+ G+++ ++S SP K E PF ++ +A +Q V+ + Sbjct: 158 VGSIGAMVMHVDYSKALEDAGITVTMIRSEQSPKKNEAHPFGPLSDEARANLQSRVNDAG 217 Query: 187 HWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 F+R V+ R + K GR++ EA G++D + +E+ L Sbjct: 218 ADFIRAVASGRRVTQSKVKEDFGQGRMFGAREAVARGMVDRISTFDELVSRL 269 >gi|94970200|ref|YP_592248.1| peptidase S49 [Candidatus Koribacter versatilis Ellin345] gi|94552250|gb|ABF42174.1| peptidase S49 [Candidatus Koribacter versatilis Ellin345] Length = 781 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 16/222 (7%) Query: 34 NSPHVARIAIRGQI---------------EDSQELIERIERISRDDSATALIVSLSSPGG 78 S V I I G I L + + +A++ + SPGG Sbjct: 76 TSGAVMVIPIYGVIGPKASQFERASSGGGTGIDALTQTFRSALSNPDISAIVFDVDSPGG 135 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 S + + I + +K ++ +V AASA Y ++ ++ +V + GSIGV + Sbjct: 136 SVFGIAELADEIYAGRGKKKIVAQVAPRAASAAYWLAASAGEVVVTPSGQAGSIGVFVAH 195 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + LD GV + + K E + ++ +A MQ++VD Y FV+ V+ R Sbjct: 196 EDLSKALDMQGVKETLISAGKYKVEGASSQPLSDEARAAMQNMVDQYYGAFVQGVARGRA 255 Query: 199 IPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + +GR+ + +A ++G++D + ++ +L Sbjct: 256 VTAATVRNSFGEGRVVSAQDALQLGMVDRIATLDQTIAALLG 297 >gi|223993391|ref|XP_002286379.1| hypothetical protein THAPSDRAFT_261093 [Thalassiosira pseudonana CCMP1335] gi|220977694|gb|EED96020.1| hypothetical protein THAPSDRAFT_261093 [Thalassiosira pseudonana CCMP1335] Length = 185 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 7/180 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI--TEVHEMAASAGYLISCASN--IIVAA 124 +++ L SPGG+ + +++N + V +AAS GY+++C + + AA Sbjct: 2 ILLLLDSPGGTVQDYGLASSHLARLRNEPHITLSVCVDRVAASGGYMMACQATPGQLFAA 61 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 ++VGSIGVL + L K GV +K+ KA EV + ++M Q D Sbjct: 62 PFAMVGSIGVLMETINFNDVLKKYGVKPLVIKAGKNKAPLKTLGEVTNEELKMAQSDADV 121 Query: 185 SYHWFVRLVSESRN---IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 + F V +SR + + G ++ G EA+++GLID V +E A G Sbjct: 122 IHKAFQDWVLQSRPNVVVSKGWIEKVCTGSVFLGKEARELGLIDRVMTSDEYVAERIANG 181 >gi|83645660|ref|YP_434095.1| periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] gi|83633703|gb|ABC29670.1| Periplasmic serine protease (ClpP class) [Hahella chejuensis KCTC 2396] Length = 427 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 102/269 (37%), Gaps = 20/269 (7%) Query: 26 SWSSHVEDNSPH-----VARIAIRGQI-------------EDSQELIERIERISRDDSAT 67 S+ + P+ VA + + G + LI RI D Sbjct: 61 SYGPNRARERPYQVVDGVAIVPVSGTLVHKFGYLRPTSGMTGYDGLIARINDAVGDPEVR 120 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + SPGG I +KP+ + ++MA SA + I+ A++ + ++ Sbjct: 121 GILLDMDSPGGEVAGCFDTTAMIAAYAKQKPIWSLTYDMACSACFAIASATSRRLITQSG 180 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + GS+GV+ + + L +G + + S KAE +P+ ++ + + Q + + Sbjct: 181 VAGSVGVIMAHVSRQEELAAMGRKVTLIYSGKYKAEGNPYEDLPEETLSRFQAEMHTLRE 240 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSI 246 F +V+ + + + + ++ +++ G A VG + E L S Sbjct: 241 QFAGIVATNTGLSIEAVMS-TEAQVYRGQAAIDVGFAHEIVNGHEAVGIFSEYLKTTNSN 299 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 + + + D+ + E+ Sbjct: 300 KGVVYMTTEQTQPVADVAKERAQAATEER 328 >gi|330815838|ref|YP_004359543.1| peptidase S49 [Burkholderia gladioli BSR3] gi|327368231|gb|AEA59587.1| peptidase S49 [Burkholderia gladioli BSR3] Length = 353 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 1/191 (0%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ + + + D S + +++ + SPGG Y I+ + +KPV + +A Sbjct: 91 MSLEQFMSQFRAMMADSSVSGILIDIDSPGGGVYGVPEAAAEIRAARGKKPVYAVANSVA 150 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 ASA Y I+ +++ + +GSIGV + + L+K G+ V + K E +PF Sbjct: 151 ASAAYWITSSASEFYVTSSGELGSIGVYASHQDLSAALEKEGIKTTLVSAGKYKTERNPF 210 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDV 226 ++ +A MQ +D+ Y FVR V+ SRN+ + GR+ ++A + D Sbjct: 211 GPLSKEAEAAMQSRIDACYRTFVRDVARSRNVDAAYVNARMGQGRLVGASDAVAAKMADG 270 Query: 227 VGGQEEVWQSL 237 V +EV L Sbjct: 271 VMTFDEVLAKL 281 >gi|146174461|ref|XP_001019379.2| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila] gi|146144797|gb|EAR99134.2| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila SB210] Length = 255 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 11/212 (5%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 P V + I GQI + EL + ++ I +A AL V ++SPGGS + + I Sbjct: 10 KPTVPVVTINGQITEKSVIELEKNLKDIRV-STAKALAVVVNSPGGSPTQSKKMVDLIHN 68 Query: 93 VKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + V T ++AASAG+ + + + + A + S +GSIG + + VK + G+ Sbjct: 69 FAHDNHLTVYTFAEDLAASAGFQVLISGDKVFADQQSTLGSIGSITNFMNVKELILNQGI 128 Query: 151 SIKSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV--- 206 I+SV ++P S F +V + + ++++ S + F+ LV E R Sbjct: 129 EIRSVTTNPASVTNQSMFKDVPEELRHVYENMLQSQHKKFIDLVEEQRGSKIKVPKEKRG 188 Query: 207 --LSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 L +G ++ G +A + GLID +G ++V + Sbjct: 189 SLLYNGDVFNGKQALEYGLIDSIGRVQDVMKE 220 >gi|126459873|ref|YP_001056151.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] gi|126249594|gb|ABO08685.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] Length = 522 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 113/273 (41%), Gaps = 25/273 (9%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 Y + P + + I+ D+ L +R+ +S+ +++ ++SPGG+ Sbjct: 21 YLALHPPAPAPPPKIVVATLDFVIQSPDAGALAQRLVELSQRGDVAGVVLVINSPGGTVS 80 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 EA++ ++ + KP V+ +AAS Y ++ A++ I A +S VGSIGV+ Sbjct: 81 DTEALYATLRGL--GKPKYAVVYGLAASGAYYVAAAADKIYATPSSWVGSIGVIAVIWPD 138 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + D + P+K + + V+ + FV+ V+E R Sbjct: 139 EYLYDAPD---YVYTTGPLKYYGMDLTS--------FYNAVEEVRNNFVKAVAEGRRGRL 187 Query: 202 D-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 L ++T ++A ++GL+D +GG + + + + + ++ P N Sbjct: 188 RVNATELETAALYTASQALEMGLVDKIGGVPDAVRDMAQELGLREYQ--VEYLKPLNATQ 245 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 + S L ++ PL ++ +W P Sbjct: 246 GPASQRASLSALLNSTPL-------PIFYMWPP 271 >gi|170744988|ref|YP_001763287.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] gi|170659395|gb|ACB28442.1| peptidase S49 [Methylobacterium radiotolerans JCM 2831] Length = 374 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 13/215 (6%) Query: 38 VARIAIRGQ-------IEDSQELIE------RIERISRDDSATALIVSLSSPGGSAYAGE 84 A I + G I S L+ ++ S+DD A+++ PGG A Sbjct: 73 TAIIPVIGSTVNRGAWIGASSGLVSYEGLKFQLAHASQDDRTRAVLLDFECPGGEAVGAF 132 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 +++V KPV+ V+ + ASA Y ++ + IV + + GSIGV+ + V Sbjct: 133 EAAAVVRQVAALKPVVAVVNGLCASAAYAMASGATRIVTTPSGIAGSIGVVMLHTDVSGA 192 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K GV + + K + P+ + ++ ++ Y F+ V+ R + Sbjct: 193 LAKAGVKPTLIFAGKHKTDGHPYGPLPDSVKADLRAEIEGFYAAFINCVATGRKNLTAEA 252 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ R + GA A GL D VG E L A Sbjct: 253 IRGTEARTFMGAAAVAAGLADEVGTFEGALVDLEA 287 >gi|171913527|ref|ZP_02928997.1| peptidase S49 [Verrucomicrobium spinosum DSM 4136] Length = 306 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 20/217 (9%) Query: 38 VARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 VA + I G + D + I++ + +++ ++SPGG Sbjct: 93 VAVVPIYGILAKNAGFMEEACQGLSDINGAMTAIQQAMKAKEIKTIVLDVASPGGQVTGI 152 Query: 84 EAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 I A+++ K V T E ASA Y I ++ I +S VGSIG + Sbjct: 153 REIAAAVREATQVRGKTVYTFSDERIASAAYWIGSQADEIYVTPSSTVGSIGTYLAWLDP 212 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + G+ ++ + K P + +++Q V+ WF VS +R Sbjct: 213 SMKMAMEGLRLEYFGAGTHKGMGLPGKPLTEADRKLLQGKVEEINGWFKDGVSAARPKVA 272 Query: 202 DKTLVLSDGRIWTGAEAKKVGLIDVV-GGQEEVWQSL 237 D T+ G+ ++G EA K+ L D + G EE + L Sbjct: 273 DSTM---QGQTFSGEEAVKLKLADGLVGSWEEFIELL 306 >gi|163796636|ref|ZP_02190595.1| Periplasmic serine protease [alpha proteobacterium BAL199] gi|159178196|gb|EDP62741.1| Periplasmic serine protease [alpha proteobacterium BAL199] Length = 425 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 16/220 (7%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 P +A + + G + ++ + +E + +++ L +PGG A Sbjct: 55 EPGIAVVPVLGTLVRRSSYLAAASGLMAYADIGDEVEAVLSSADVRGVLLELDTPGGEAG 114 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + + +++ KP+ E A SAGY I+ + I T+ VGSIGV+ + Sbjct: 115 GVFDLADRLSELQRASGKPIWAIADEAALSAGYAIASVAEQIWLTRTAEVGSIGVVAVHV 174 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G++ V + K + SP ++ A +Q VD+ FV LV+ +R + Sbjct: 175 DQSAADRQAGLAYSFVHAGAHKIDGSPHLPLSDSARARIQADVDALNDAFVDLVARNRGL 234 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D ++ + G A GL D VG + + Sbjct: 235 AADAVRR-TEAATFRGERAVVAGLADWVGNMDTTLAAFAE 273 >gi|332186917|ref|ZP_08388658.1| peptidase S49 family protein [Sphingomonas sp. S17] gi|332012927|gb|EGI54991.1| peptidase S49 family protein [Sphingomonas sp. S17] Length = 290 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 1/183 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + +R+ D A+++++ SPGG + AI +V+ KPVI SA Y Sbjct: 82 IADRVREAGADAKVGAIVLAIRSPGGYVWGCAEAGDAIYEVRQSKPVIAVADPYCFSAAY 141 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ + + VGS+GV + V F DK+G+ + S K P++ ++ Sbjct: 142 WLATQGSGFYCTTSGEVGSVGVRSGHTDVSGFEDKIGMKTTLIASHEDKIAGHPYAPLDD 201 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVVGGQE 231 A +Q VD S F ++ R I + + G+ ++ +A G ID V Sbjct: 202 AARAEIQASVDESNAAFAAAIARGRGIKASEVAGIHGTGKTFSAKQALANGAIDGVATLR 261 Query: 232 EVW 234 +V Sbjct: 262 DVV 264 >gi|46804778|dbj|BAD16787.1| similar to minor capsid protein GPC of phage lambda [Wolbachia phage WOcauB1] Length = 350 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 90/177 (50%), Gaps = 1/177 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 68 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRGKKRIIAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++++ ++ V+ Y V L++ +RN+ + ++ ++ G +A ++GL D + Sbjct: 188 TSESLENLKSEVNRLYEMLVELIARNRNLSVEAIKS-TEAGLYFGEKAVEIGLADGI 243 >gi|91782762|ref|YP_557968.1| serine peptidase [Burkholderia xenovorans LB400] gi|91686716|gb|ABE29916.1| protein C, Serine peptidase, MEROPS family S49 [Burkholderia xenovorans LB400] Length = 293 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA + I G + + + D+S A+++ + SPGG Sbjct: 77 VAIVPIEGTLVHKLGELRPYSGMTGYDGIRANLSMAMADESVRAIVLDIDSPGGEVAGCF 136 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + +I ++ KP+ E A SA Y I+ A++ I+ T GS+GV+ + Sbjct: 137 DLVDSIYAARDVKPIWAICTESAYSAAYAIATAASRIIVPRTGGTGSVGVICMHVDFSQA 196 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L K G+ ++ + KA+ S ++ A Q VD+ FV V+ +R + Sbjct: 197 LTKAGIEVELIYFGDKKADGSDMKPLSKDARARFQSDVDAMGQLFVETVARNRGLTTANV 256 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + GA ++G D V +E + SL Sbjct: 257 RG-TQAGTFLGAAGVEIGFADAVMSPDEAFASL 288 >gi|222825064|dbj|BAH22222.1| putative minor capsid protein c [Wolbachia endosymbiont of Cadra cautella] Length = 358 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 90/177 (50%), Gaps = 1/177 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E+I + D S +I+ + SPGG + I + + +K +I ++ A SA Sbjct: 58 EQIEEQITQALADSSIETIILEIDSPGGEVNGIFDLADFIYESRGKKRIIAIANDDAYSA 117 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 118 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKCGIKYTTVFAGSRKNDLNPHEPI 177 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++++ ++ V+ Y V L++ +RN+ + ++ ++ G +A ++GL D + Sbjct: 178 TSESLENLKSEVNRLYEMLVELIARNRNLSVEAIKS-TEAGLYFGEKAVEIGLADGI 233 >gi|18314240|ref|NP_560907.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] gi|18161836|gb|AAL65089.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] Length = 608 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 103/257 (40%), Gaps = 18/257 (7%) Query: 38 VARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + + + I D LI+ ++++ D+ +I+ ++SPGG+ A E ++ I+ + Sbjct: 87 IVIVPVDQPIFDYYVDFLIKYVKKLQFDNKTAGVILLINSPGGAVGATERLYSTIKGL-- 144 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 K V V +AAS Y + A+ I A +S VGSIGV+ + P + + Sbjct: 145 NKTVYAVVAGLAASGAYYTAVAAGRIYATPSSWVGSIGVVAL---LWPDEYLIDLPDYIY 201 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWT 214 + P K +E + ++ + FV V + R + +I+ Sbjct: 202 TTGPFKYYGMDLTE--------FYNDIEKTRANFVAAVLKGRAGRLKADPEVFETAKIFN 253 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 A ++GLID +GG + + + ++ + + F + L + + Sbjct: 254 AETALRLGLIDKIGGLWDAVEDMARELGLKNYTVVDIYEKYNATGFGIVVPLISGNKIP- 312 Query: 275 TIPLMKQTKVQGLWAVW 291 + + ++ +W Sbjct: 313 -LQFLMNVSAPPVFYLW 328 >gi|189022217|ref|YP_001931948.1| serine peptidase S49 family [Vibrio shilonii] gi|161087235|gb|ABX56715.1| putative serine peptidase S49 family [Vibrio shilonii] Length = 434 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 30/254 (11%) Query: 29 SHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSS 75 S + + VA I + G I ++ L + + S A+I+++ S Sbjct: 49 SQITEMRDGVAIIHVNGVISRYANLFHAVCGGVSTEVLAKEFNAALNESSVKAVILNVDS 108 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG A + I + +KPV V SA Y I+ A + + T+ VGSIG + Sbjct: 109 PGGEASGIHELSEMIHASRGKKPVRAYVGGDGCSAAYWITTACDRVTMDATARVGSIGTV 168 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ---MMQDVVDSSYHWFVRL 192 + D G SS SP ++P++ Q +Q +D+ F+ Sbjct: 169 VSFV---KRPDAEGAKRFEFVSSQ-----SPNKRLDPESEQGQTAIQTQLDAMAEVFISR 220 Query: 193 VSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V+ + + DK G + G +A G+ +G E + SL + G QS ++ Sbjct: 221 VARNMGVTSDKVKSDFGQGGVKIGQQAVDAGMAHELGSLEALIASL-SNGKSQSPTASRN 279 Query: 252 WN----PPKNYWFC 261 N P ++W Sbjct: 280 TNAQHGPNASHWLA 293 >gi|76802382|ref|YP_327390.1| signal peptide peptidase [Natronomonas pharaonis DSM 2160] gi|76558247|emb|CAI49835.1| probable signal peptide peptidase [Natronomonas pharaonis DSM 2160] Length = 315 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 21/239 (8%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATAL 69 V+L++ + S V D+ V I ++G IE +Q++ +++ +DD+ A+ Sbjct: 18 VVLLAIAAGVLAAPQVYSFVADDGDTVVVIEMQGPIETNMAQDVEDQLRDARQDDAVEAV 77 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-L 128 ++ + S GG E I+ A+ + PVI V M AS YL ++ I A ++ Sbjct: 78 VLEVESGGGLPAQSERIYAAVDRTSEEMPVIATVDTMGASGAYLSMAPADEIYVAPSAQA 137 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGS+GV P + P K PS + + Q + + Sbjct: 138 VGSVGVAGTAPSPSGPNAG--------TTGPDKRGPS-----TEQQREQQQILAN----L 180 Query: 189 FVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV V E R + ++ + G EA G D G ++ + ++ Sbjct: 181 FVESVIEQRGDEIELDREEIAHANSYLGTEAVNNGYADDFGFVDDAIEDAADEAGLRTY 239 >gi|303245382|ref|ZP_07331666.1| peptidase S49 [Desulfovibrio fructosovorans JJ] gi|302493231|gb|EFL53093.1| peptidase S49 [Desulfovibrio fructosovorans JJ] Length = 448 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 24/227 (10%) Query: 28 SSHVEDNSPHVARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSL 73 S + +VA I + G I + L ++ D + ++++++ Sbjct: 54 GSRTVEMRGNVAIIPVMGPIFPRASMFESISQAAVSVETLARDLQAALDDPAVASIVLNI 113 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 SPGG + + KPV+ + ASA Y I+ A++ I A ++VGSIG Sbjct: 114 DSPGGQVSGIHEFASQVFYAGSVKPVVAYIQGTGASAAYWIASATSRIFADAAAVVGSIG 173 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 ++ P G ++ V S K P + + +D + FV V Sbjct: 174 IVATIP------KNDGKTLSIVSSRAPKKRVDP---ETEEGRAEVVRTLDDLHAVFVGDV 224 Query: 194 SESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + R ++ G + GA A G+ D +G E V L A Sbjct: 225 AAFRGFTREEVEQNFGQGGVLVGARAVAAGMADALGSLEGVIAELSA 271 >gi|307546775|ref|YP_003899254.1| peptidase S49 [Halomonas elongata DSM 2581] gi|307218799|emb|CBV44069.1| peptidase S49 [Halomonas elongata DSM 2581] Length = 407 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 21/220 (9%) Query: 35 SPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 VA I I G + ++ L++ I+ D S +++++ SPGG A Sbjct: 54 RDGVAVIPITGPVFRYANLFTEISGAVSTEMLVKDIQTALDDPSIQGIVLNIDSPGGEAT 113 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 + I + +KP+ ASA Y + A++ ++ +T+ +GS+GV+ + Sbjct: 114 GINELSDLIYNARGQKPIKAYAGGQMASALYWVGSAADEVIVDDTAQLGSVGVVLS---L 170 Query: 142 KPFLDKLGVS-IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + D+ G + V S+ P P +Q D F+ V+ +R++P Sbjct: 171 RKREDRPGEKSYEIVSSNAPNKRPDP---ETEAGRAQLQARTDELAAVFLDKVARNRDLP 227 Query: 201 YDKT-LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 D+ G + TGA A + G+ D +G E V L Sbjct: 228 RDEVNDRFRQGGVATGALAVEAGMADRLGSLESVIAELAG 267 >gi|10957305|ref|NP_058329.1| hypothetical protein R27_p116 [Salmonella typhi] gi|18466650|ref|NP_569458.1| putative peptidase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|7800358|gb|AAF69954.1|AF250878_115 orf; hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|16505966|emb|CAD09852.1| putative peptidase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|145849084|emb|CAM91648.1| putative transmembrane peptidase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|313651407|gb|EFS15803.1| peptidase family S49 family protein [Shigella flexneri 2a str. 2457T] Length = 393 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 9/203 (4%) Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP+I V + ASA Y ++ I A ++L GSIGV + + +D +GV + + Sbjct: 191 KPIIVSVKGICASACYYAVSPADAIYADSSALTGSIGVRMDHWNLSRVMDTVGVKNEPLT 250 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNI-----PYDKTLVLSDG 210 + K P+ ++ MQ + D+ + F+ V + R P + L G Sbjct: 251 AGEFKDALDPYHPLSDATRDFMQKQILDAMHEQFIADVEQGRGKKLLSRPEADAVALYSG 310 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R+WT +A + GLID EV L + S K +N P+ L L S Sbjct: 311 RVWTTQQAIRYGLIDGDLTPVEVRSRLSQM---YSTTIFKTYNEPQRSLRSALGMLMSLS 367 Query: 271 LLEDTIPLMKQTKVQGLWAVWNP 293 +T+ + + A P Sbjct: 368 TNVETLAGTTSRILDSVQATSYP 390 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 9/91 (9%) Query: 14 MLSLVTLTVVYFSWSSHVEDNS---PHVARIAIRGQIEDSQE------LIERIERISRDD 64 +L+L V F+ +++ H+A + I G++ E + + + + Sbjct: 40 LLALAAAGVSAFNIYDKYQESEGRMDHIAVVRISGEMGTGSEVGDGSVIATALAKAYNNP 99 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 A A+I+ S GG I+R I +++ Sbjct: 100 HAKAVIIEAESGGGGPSDAIIIYRQINALRS 130 >gi|323953809|gb|EGB49615.1| peptidase S49 [Escherichia coli H263] Length = 241 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGILLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 L + GV I + S K + + F + + Q MQ +D++ Sbjct: 198 LAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRM 241 >gi|160431862|ref|YP_001551976.1| putative peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|260752171|ref|YP_003237686.1| signal peptide peptidase [Escherichia coli O111:H- str. 11128] gi|159885403|dbj|BAF93007.1| putative peptidase [Salmonella enterica subsp. enterica serovar Choleraesuis] gi|257767641|dbj|BAI39135.1| signal peptide peptidase [Escherichia coli O111:H- str. 11128] Length = 393 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 9/203 (4%) Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP+I V + ASA Y ++ I A ++L GSIGV + + +D +GV + + Sbjct: 191 KPIIVSVKGICASACYYAVSPADAIFADSSALTGSIGVRMDHWNLSRVMDTVGVKNEPLT 250 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNI-----PYDKTLVLSDG 210 + K P+ ++ MQ + D+ + F+ V + R P + L G Sbjct: 251 AGEFKDALDPYHPLSDATRDFMQKQILDAMHEQFIADVEQGRGKKLLSRPEADAVALYSG 310 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R+WT +A + GLID EV L + S K +N P+ L L S Sbjct: 311 RVWTTQQAIRYGLIDGDLTPVEVRSRLSQM---YSTTIFKTYNEPQRSLRSALGMLMSLS 367 Query: 271 LLEDTIPLMKQTKVQGLWAVWNP 293 +T+ + + A P Sbjct: 368 TNVETLAGTTSRILDSVQATSYP 390 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 9/91 (9%) Query: 14 MLSLVTLTVVYFSWSSHVEDNS---PHVARIAIRGQIEDSQE------LIERIERISRDD 64 +L+L V F+ +++ H+A + I G++ E + + + + Sbjct: 40 LLALAAAGVSAFNIYDKYQESEGRMDHIAVVRISGEMGTGSEVGDGSVIATALAKAYNNP 99 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 A A+I+ S GG I+R I +++ Sbjct: 100 HAKAVIIEAESGGGGPSDAIIIYRQINALRS 130 >gi|2282048|gb|AAB65791.1| Z2Z3 protein [Vibrio shilonii AK1] Length = 330 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 30/254 (11%) Query: 29 SHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSS 75 S + + VA I + G I ++ L + + S A+I+++ S Sbjct: 30 SQITEMRDGVAIIHVNGVISRYANLFHAVCGGVSTEVLAKEFNAALNESSVKAVILNVDS 89 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG A + I + +KPV V SA Y I+ A + + T+ VGSIG + Sbjct: 90 PGGEASGIHELSEMIHASRGKKPVRAYVGGDGCSAAYWITTACDRVTMDATARVGSIGTV 149 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ---MMQDVVDSSYHWFVRL 192 + D G SS SP ++P++ Q +Q +D+ F+ Sbjct: 150 VSFV---KRPDAEGAKRFEFVSSQ-----SPNKRLDPESEQGQTAIQTQLDAMAEVFISR 201 Query: 193 VSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 V+ + + DK G + G +A G+ +G E + SL + G QS ++ Sbjct: 202 VARNMGVTSDKVKSDFGQGGVKIGQQAVDAGMAHELGSLEALIASL-SNGKSQSPTASRN 260 Query: 252 WN----PPKNYWFC 261 N P ++W Sbjct: 261 TNAQHGPNASHWLA 274 >gi|163784834|ref|ZP_02179617.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] gi|159879894|gb|EDP73615.1| proteinase IV [Hydrogenivirga sp. 128-5-R1-1] Length = 172 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 76/161 (47%) Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPK 173 IS A+ I A ++ GSIGV+ Q+ + ++K+GV I ++KS K P ++ P+ Sbjct: 1 ISAAATEIFANPGTITGSIGVIVQHMDLTNLMNKVGVKITNIKSGKNKDILYPNHKLKPE 60 Query: 174 AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 ++++ V Y F+ V + R I +K +DGR+++G +A K+GL+D +G ++ Sbjct: 61 EAKLIKQTVLDVYEQFLDAVVKYRKIDKEKLRPYADGRVFSGRQALKLGLVDKLGNLQDA 120 Query: 234 WQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 L + + + L I L D Sbjct: 121 VDEARKLIGKEGKSAVVIKLGRQKPLLEKLLGAKIDLNLLD 161 >gi|144898890|emb|CAM75754.1| Peptidase S49 [Magnetospirillum gryphiswaldense MSR-1] Length = 410 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 16/258 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERI-------------ERISRDDSATALIVS 72 + S+ V +A + + G + + E + D A+++ Sbjct: 46 APSADVAVTPDGIAIVPVVGTLVARSGYLGAASGLTGYGDIADAIEAAATDPGVRAILLD 105 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + S GG + IQ ++++ KP+ E A SA Y I+C ++ I +T VG Sbjct: 106 VDSSGGEVGGLFDLVDHIQAIRSQCGKPIWAVADEAALSAAYAIACTADRIYVTQTGEVG 165 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + + G++ V + K + +P ++ A +Q VD+ Y FV Sbjct: 166 SIGVVAVHRDESGADAQAGLAWTFVHAGAAKVDGNPHQPLSDSARAGLQADVDALYGRFV 225 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+ R P + ++ ++ G +A GL D VG L SIR Sbjct: 226 ALVARCRKQPPEAIRA-TEAAVYRGDQAVAAGLADKVGTLRVALADLGTTLARPSIRSPV 284 Query: 251 DWNPPKNYWFCDLKNLSI 268 P + ++ + Sbjct: 285 LSKPKETTMSEQTGDIPV 302 >gi|306820326|ref|ZP_07453965.1| signal peptide peptidase SppA [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551655|gb|EFM39607.1| signal peptide peptidase SppA [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 294 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 86/215 (40%), Gaps = 26/215 (12%) Query: 30 HVEDNSPHVARIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 D+ +A + + G ++ + + + I +I+ + SP G Y I Sbjct: 61 KAGDSDSKIATVTLDGTLDSFVKQDYITKSLNNIMNTPEVKGVIIRIDSPKGGIYDSVEI 120 Query: 87 FRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ K K PV + ++ GY ++ + + + A E +++ Sbjct: 121 SEMIKAFKTDKKVPVYAVIGSATSAGGYCVAISCDKVYAKENTII----------NYTKL 170 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +K + S +N ++ +++++Y FV V ES+ I + Sbjct: 171 FEKN--ETEL---------GSTDRALNVDGRSSLRSILENAYEKFVSTVMESKGIDEARV 219 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 L+DGRI+ G +A + L+D VGG + ++ + Sbjct: 220 RTLTDGRIYNGTQAHENQLVDEVGGFNDAVNAMKS 254 >gi|126458778|ref|YP_001055056.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] gi|126248499|gb|ABO07590.1| peptidase S49 [Pyrobaculum calidifontis JCM 11548] Length = 612 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 15/221 (6%) Query: 35 SPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + + + I D + L++ ++R+ DD +++ ++SPGG+ A E ++ I Sbjct: 85 EKEIVVVPVDFAIYDYEVDFLVKYVKRLEFDDRVAGVVLLINSPGGAVGATERLYSTIAG 144 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + K + + AS Y + A+ I A +S VGS+GV+ + P V Sbjct: 145 LNKTK--YAVIAGLGASGAYYTAVAAEKIYATPSSWVGSVGVIAL---IAPEDYLAEVPD 199 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + P K K + + D V+ + FV V + R + I Sbjct: 200 WIYTTGPWKYYG--------KDLLALYDDVEKTRENFVNAVLKGRGDRLKDLKAVETAEI 251 Query: 213 WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + EA ++GLID +GG + + + ++ + + Sbjct: 252 FRADEALRIGLIDAIGGLWDAVRDMAKELGLKNYTVVDIYE 292 >gi|225630471|ref|YP_002727262.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|225592452|gb|ACN95471.1| minor capsid protein C, putative [Wolbachia sp. wRi] Length = 345 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 1/176 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IER D S +++ + SPGG + I + + +K +I ++ A SA Sbjct: 68 EKIHEEIERALEDKSIETILLDIDSPGGEVNGVFDLADFIYESRAKKRIIAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++++ ++ V+ Y V L++ +R++ + ++ ++ G +A ++GL D Sbjct: 188 TSESLENLKSEVNRLYGMLVELIARNRSLSVEAIKN-TEAGLYFGEKAIEMGLADG 242 >gi|110668977|ref|YP_658788.1| protease IV; endopeptidase IV; signal peptide peptidase [Haloquadratum walsbyi DSM 16790] gi|109626724|emb|CAJ53191.1| Protease IV; endopeptidase IV; probable signal peptide peptidase [Haloquadratum walsbyi DSM 16790] Length = 305 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 85/235 (36%), Gaps = 19/235 (8%) Query: 29 SHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + + V+ I + G I S L E + +DS ++++ + S GG+ E + Sbjct: 38 AQSAQSEGTVSVITVSGVITGSKVDTLSEDLREARINDSIKSVVLKVDSGGGAVAPSERL 97 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + + + PV+ V ++AS Y +N + VGS+GV+ Sbjct: 98 YLEVLRTAKEIPVVASVQGVSASGAYYGILPANETFMLSSGQVGSVGVIGAGGTA----- 152 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTL 205 V + +++ P KA + Q V+S FV V E R Sbjct: 153 --PVPDRIIRTGPDKA-----QPTTEQRRQ----QVESLKRQFVNRVVEHRGENITLSRE 201 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 +++ + + G A + GLID +G + + + P F Sbjct: 202 EIANAKTYLGPRAAENGLIDQLGTLSVAIDHAAEMAGMEDYDIARKEPPRGGLIF 256 >gi|294676957|ref|YP_003577572.1| S49 family peptidase [Rhodobacter capsulatus SB 1003] gi|294475777|gb|ADE85165.1| peptidase, S49 family [Rhodobacter capsulatus SB 1003] Length = 316 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 14/228 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVS 72 + +H+ +A I I G + + + +++ D + + + Sbjct: 15 ARYAHLAAEPVRMAVIEIAGTLVHRGAWIGQSSGLTSYEGIAAQLQAAVADPAIRGIALD 74 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + S GG + I+ + +KPV V + A SA Y ++ + I+ T VGSI Sbjct: 75 IDSFGGEVAGAFDMADRIRAARAQKPVQAFVADHALSAAYALASQAGRIILPRTGAVGSI 134 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + LD+ G+++ + + K + +P+ + + ++ F Sbjct: 135 GVVAMHSDMSGALDQKGIAVTLIHAGARKVDANPYQPLPETIRARIAGELEDLRQLFAET 194 Query: 193 VSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+E R D + L ++ ++ G A GL D V + + A Sbjct: 195 VAEGRGRRLDTSRALDTEAAVFRGEAAVFAGLADEVADPVTAFCAFAA 242 >gi|301306894|ref|ZP_07212941.1| peptidase, S49 family protein [Escherichia coli MS 124-1] gi|300837903|gb|EFK65663.1| peptidase, S49 family protein [Escherichia coli MS 124-1] Length = 239 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 13/171 (7%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAA 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 L+K GV I + S K + +P+S + + +Q +D++ F + VS Sbjct: 189 LEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSA 239 >gi|319408485|emb|CBI82140.1| putative capsid protein of prophage [Bartonella schoenbuchensis R1] gi|319409130|emb|CBI82774.1| putative capsid protein of prophage [Bartonella schoenbuchensis R1] Length = 280 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 16/220 (7%) Query: 35 SPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 HVA + + G + L E + A+++ + S GG A Sbjct: 59 KNHVAILPVHGTLVRRGAWLSAASGLTSYNGLREAFQEAIGQPDVRAILLDIDSGGGEAG 118 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + A + + KP+ +EMA SA Y I+CA++ I A T +VGSIGV+ + Sbjct: 119 GVFDLVDAFRALSQEYNKPIWAHANEMACSAAYAIACAASQIWVARTGIVGSIGVVCAHL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G V K +P + KA++ MQ Y FV LV+++R Sbjct: 179 DQSRADEMDGYKWTFVYEGDHKVHGNPHEPLADKALEKMQADCALLYDMFVDLVAQNRPT 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + G +A ++GL D G + ++L A Sbjct: 239 SAQAIRD-TKAETFIGTQAVELGLADAQGTFAQALEALTA 277 >gi|221369919|ref|YP_002521015.1| Peptidase U7 [Rhodobacter sphaeroides KD131] gi|221162971|gb|ACM03942.1| Peptidase U7 [Rhodobacter sphaeroides KD131] Length = 477 Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 13/173 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I G + + + +I+ + D + L + + S GG Sbjct: 82 IAVIEIAGVLIHRGGWIGQSSGQTSYEGIAAQIKAAASDPAVRGLALEIDSFGGEVAGVF 141 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ ++ KPV V E A SAGY ++ ++ I+ T +GSIGV+ + + Sbjct: 142 DLADRIRAIRGAKPVWAFVAEHALSAGYALASQADRILLPRTGALGSIGVVVLHADLSGK 201 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 LD+ GV + + S K + +P+ + +Q +D F V+ R Sbjct: 202 LDQDGVRVTLIHSGQHKVDGNPYQPLPEAVQGDIQREIDVLRFLFAETVAAGR 254 >gi|256841934|ref|ZP_05547439.1| signal peptide peptidase SppA, 36K type [Parabacteroides sp. D13] gi|256736250|gb|EEU49579.1| signal peptide peptidase SppA, 36K type [Parabacteroides sp. D13] Length = 294 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 13/223 (5%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLS 74 Y WS + VA + I G I + + R +++ A+++++ Sbjct: 70 YGGWSPPEDAPKNSVAIMNINGAITKYDQECGPSGMLTKANLLNRCYNENNIKAIVLNID 129 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET-SLVGSIG 133 S GG + AI KPV+ ++ ASA Y I+ + IVA +GS+G Sbjct: 130 SGGGEGMGCRIMQEAIN--SRNKPVVAFCNDFVASAAYGIASCCDKIVANSNVCRIGSVG 187 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + K+G+ + + +S + F + + ++ V D+ F+ + Sbjct: 188 TYMTIVDTSEYYAKMGIKLIDIYASKSTDKNQEFHKALQGDTEPLKKVCDTYNENFISSI 247 Query: 194 SESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +R + + + G+++ EA +G+ID + E V Sbjct: 248 ANARVGVINEDQGKWATGKMFFAPEAMDIGMIDEIDTFENVLN 290 >gi|126352250|tpe|CAJ29275.1| TPA: exfoliative toxin [Staphylococcus intermedius] Length = 120 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 63/120 (52%) Query: 103 VHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + +AAS GY IS ++ I A SL GSIGV+ + LD LG+ ++KS K Sbjct: 1 MENLAASGGYYISAPADKIYAGPQSLTGSIGVISESKDYSELLDNLGIKTNTIKSGAHKD 60 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S ++ + +++Q + S+ FV +V E R + K L+DGRI++ +AK G Sbjct: 61 ILSSSRKMTDEEREILQSINKDSFDQFVNVVKEGRQMSESKVRELADGRIYSAQQAKSNG 120 >gi|163867606|ref|YP_001608805.1| putative capsid protein of prophage [Bartonella tribocorum CIP 105476] gi|161017252|emb|CAK00810.1| putative capsid protein of prophage [Bartonella tribocorum CIP 105476] Length = 348 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 27/259 (10%) Query: 35 SPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +VA I + G + + L A+++ + S GG A Sbjct: 59 QNNVAIIPVHGTLVRRGAWLGALSGLTSYEGLRASFREAIAQPDVNAVLLDIDSGGGEAG 118 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+CA++ I T +VGSIGV+ + Sbjct: 119 GIFDLVEEFQTLSKQYAKPIWAHANEFACSAAYAIACAASQIWITRTGVVGSIGVVCAHL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G+ V K +P ++ A MQ Y FV V+++R + Sbjct: 179 DQSRADEKQGLKWTFVFEGDHKTHGNPHEPLSDTAQIKMQADCTLLYEMFVDWVAKNRPL 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D + + G +A ++GL D G + ++L D + +N W Sbjct: 239 SADAIRD-TKAETFIGTQALELGLADAQGTLAQALEALT----DSISQTPTATKKGQNTW 293 Query: 260 FCD-------LKNLSISSL 271 +K LS SS+ Sbjct: 294 HAPYTAPKKMMKKLSTSSM 312 >gi|262365465|gb|ACY62022.1| peptidase family U7 protein [Yersinia pestis D182038] Length = 168 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +++C ++ I+ A +++GSIGV+ Q P L K + ++ + K + F E Sbjct: 1 MMACVADRIICAPFAIIGSIGVVAQIPNFHRLLKKNDIDVELHTAGEFKRTLTLFGENTE 60 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + ++ ++ ++ F + V + R P ++ G W G +AK+ GL+D +G ++ Sbjct: 61 QGREKFREDLNETHLLFKQFVQQQR--PSLDIDAVATGEHWFGTQAKEKGLVDAIGTSDD 118 Query: 233 VW 234 + Sbjct: 119 LL 120 >gi|284988655|ref|YP_003407209.1| peptidase S49 [Geodermatophilus obscurus DSM 43160] gi|284061900|gb|ADB72838.1| peptidase S49 [Geodermatophilus obscurus DSM 43160] Length = 417 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 30/248 (12%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPG 77 D + + + G I S+ ++ + I+ + A LI+ L++PG Sbjct: 114 AADAPARLIAVPVTGVILGSESDGVTFGGATYGYDVADTID-ALETEDADGLILELNTPG 172 Query: 78 GSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G+ + AI A+++ + V+ V M+AS G ++ IVA SLVGSIGV+ Sbjct: 173 GTIHGSRAIADAVERYQKRTGNQVLAHVQGMSASGGMYAMAGADQIVADHGSLVGSIGVI 232 Query: 136 FQ----YPYVKPFLDKL---------GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + V L GV+ + + K +P+ ++ + ++ + Sbjct: 233 MGPFQRFRDVTGIPGSLLEPGVTTDGGVTEEYLTRGRGKDFGNPYRDMTEEERAVLGRGL 292 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL-G 241 D Y FV VS++R IP + ++ A GL+D V G+EE ++ + G Sbjct: 293 DREYEAFVSWVSQARGIPPQTIVDELGAFVFDSYTAVDRGLVDRVLGREEAYRHAAEING 352 Query: 242 VDQSIRKI 249 D ++ Sbjct: 353 ADPDDTRV 360 >gi|58698702|ref|ZP_00373591.1| hypothetical protein WwAna1181 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534788|gb|EAL58898.1| hypothetical protein WwAna1181 [Wolbachia endosymbiont of Drosophila ananassae] Length = 345 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 1/176 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IER D S +++ + SPGG + I + + +K +I ++ A SA Sbjct: 68 EKIHEEIERALEDKSIETILLDIDSPGGEVNGVFDLADFIYESRAKKRIIAIANDDAYSA 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIG++ + F +K G+ +V + K + +P + Sbjct: 128 AYAIASSAEKIFLTRTSGVGSIGIIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 187 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++++ ++ V+ Y V L++ +R++ + ++ ++ G +A ++GL D Sbjct: 188 TSESLENLKSEVNRLYGMLVELIARNRSLSVEAIKN-TEAGLYFGEKAIEMGLADG 242 >gi|42520455|ref|NP_966370.1| prophage LambdaW4, minor capsid protein C, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|58696804|ref|ZP_00372334.1| hypothetical protein WwSim0278 [Wolbachia endosymbiont of Drosophila simulans] gi|58699409|ref|ZP_00374166.1| hypothetical protein WwAna0001 [Wolbachia endosymbiont of Drosophila ananassae] gi|99034491|ref|ZP_01314479.1| hypothetical protein Wendoof_01000714 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225630333|ref|YP_002727124.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|225630727|ref|YP_002727518.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|42410194|gb|AAS14304.1| prophage LambdaW4, minor capsid protein C, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|58534074|gb|EAL58316.1| hypothetical protein WwAna0001 [Wolbachia endosymbiont of Drosophila ananassae] gi|58536999|gb|EAL60149.1| hypothetical protein WwSim0278 [Wolbachia endosymbiont of Drosophila simulans] gi|225592314|gb|ACN95333.1| minor capsid protein C, putative [Wolbachia sp. wRi] gi|225592708|gb|ACN95727.1| minor capsid protein C, putative [Wolbachia sp. wRi] Length = 353 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 89/177 (50%), Gaps = 1/177 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IE D +I+ + SPGG + I + + +K ++ ++ A SA Sbjct: 70 EKISEEIEEALIDKEVETIILDIDSPGGEVNGLFDLSDFIYQARRKKRIVAIANDDAYSA 129 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ ++ TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 130 AYAIASSAEKVLVTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 189 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 ++++ ++ V+ Y V L++ +RN+ + ++ ++ G +A ++GL D + Sbjct: 190 TSESLESLKSEVNRLYGMLVELIARNRNLSVEAIKS-TEAGLYFGEKAVEIGLADGI 245 >gi|119872893|ref|YP_930900.1| peptidase S49 [Pyrobaculum islandicum DSM 4184] gi|119674301|gb|ABL88557.1| peptidase S49 [Pyrobaculum islandicum DSM 4184] Length = 550 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 113/274 (41%), Gaps = 28/274 (10%) Query: 13 VMLSLVTLTVVYF---SWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERISRDDSAT 67 + + + L V++ + + P + +++ I ++ +L++ + +S+ D Sbjct: 14 LAIGVAALFAVFYICQPKPAAPQPVKPKIVLVSVDFVIGGPETDKLVKALTELSQRDDVA 73 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ ++SPGG+ E ++ + + K + + AS Y + A+ I AA +S Sbjct: 74 GIVLVINSPGGTVSGTETLYTTLLGLNKTK--YAVIVGLGASGAYYTAVAAERIYAAPSS 131 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 VGSIGV+ + P L + + P+K + + D V+ Sbjct: 132 WVGSIGVVAV---IWPDLYLYDAADYIYTTGPLKYYG--------EDLHGYYDDVEKIRQ 180 Query: 188 WFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 FV V R VL ++T EA K+GL+D +GG + + + ++ Sbjct: 181 NFVEAVLRGRAGRIKADPAVLETAGLFTAEEALKLGLVDKIGGVLDAARDMAEELGLRNY 240 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 + + DL N++ ++ +PL + Sbjct: 241 SLV---------YLGDLMNMTAAAASAWRVPLSQ 265 >gi|58040764|ref|YP_192728.1| bacteriophage minor capsid protein C [Gluconobacter oxydans 621H] gi|58003178|gb|AAW62072.1| Bacteriophage minor capsid protein C [Gluconobacter oxydans 621H] Length = 265 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 12/214 (5%) Query: 38 VARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 VA I + G + Q++ + + D + + + + ++SPGG+ Sbjct: 53 VALIPVSGILLPGRGWSWSGATYYQDIRKALNSALDDAAVSRIALMVNSPGGTVSECFDT 112 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I + + KP+ +++ A SA Y I+ A++ I + GSIG + + + LD Sbjct: 113 AEMIYQARGEKPIWAILNDAAYSAAYAIASAADFITVPQMGGTGSIGCVGMHVDITDALD 172 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K G+ + + + K + P + + A + Q +D +FV+ V+ +R I D Sbjct: 173 KAGIKVTTFQYGARKTDGYPTTPMTDPARERAQAEIDEMGDFFVQTVARNRAISADVVRN 232 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + + G ++GL D + EE + L Sbjct: 233 -TQAGTYLGRHGVEIGLADEIATPEEAIAAFLKL 265 >gi|163867766|ref|YP_001608968.1| putative capsid protein of prophage [Bartonella tribocorum CIP 105476] gi|161017415|emb|CAK00973.1| putative capsid protein of prophage [Bartonella tribocorum CIP 105476] Length = 349 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 28/260 (10%) Query: 35 SPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 +VA I + G + + L A+++ + S GG A Sbjct: 59 QNNVAIIPVHGTLVRRGAWLGALSGLTSYEGLRASFREAIAQPDVNAVLLDIDSGGGEAG 118 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+CA++ I T +VGSIGV+ + Sbjct: 119 GIFDLVEEFQTLSKQYAKPIWAHANEFACSAAYAIACAASQIWITRTGVVGSIGVVCAHL 178 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G+ V K +P ++ A MQ Y FV V+++R + Sbjct: 179 DQSRADEKQGLKWTFVFEGDHKTHGNPHEPLSDTAQIKMQADCTLLYEMFVDWVAKNRPL 238 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 D + + G +A ++GL D G + ++L D + +N W Sbjct: 239 SADAIRD-TKAETFIGTQALELGLADAQGTLAQALEALT----DSISQTPTATKKGQNTW 293 Query: 260 FCD--------LKNLSISSL 271 +K LS SS+ Sbjct: 294 HAPYTALEKMMMKKLSTSSM 313 >gi|254884972|ref|ZP_05257682.1| protease [Bacteroides sp. 4_3_47FAA] gi|254837765|gb|EET18074.1| protease [Bacteroides sp. 4_3_47FAA] Length = 286 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 10/221 (4%) Query: 35 SPHVARIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 S VA I + G + + L E I + + +D +I+ ++ PGG + + I + Sbjct: 69 SDSVAVIVLEGTLYSWETFRLQEYIAQAAANDRIAGIILWINGPGGMITGLDNASKMISE 128 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIV-AAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 KPV+ + ASA + ++ A++ + VGSIGV+ Y K L K G+ Sbjct: 129 C--PKPVVAYIAGACASAHFWLASAADKRFLGSLMCEVGSIGVVGTYYNAKEALKKKGID 186 Query: 152 IKSVK--SSPMK-AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + S+ +K E +E N + ++ + + F R VSE+ +I YDK + Sbjct: 187 YREIYPDSADLKNREHREIAENNNEE--PYKEKLSKLHMMFCRTVSENLSIAYDKDSPVF 244 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 G + G EA + GL D E + + A V +I Sbjct: 245 RGATFMGDEAVREGLADGYNTLEGAARWILAQSVINKTNQI 285 >gi|312964065|ref|ZP_07778509.1| peptidase family S49 family protein [Escherichia coli 2362-75] gi|312291106|gb|EFR18968.1| peptidase family S49 family protein [Escherichia coli 2362-75] Length = 127 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 3/129 (2%) Query: 92 KVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 +++++ P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL + Sbjct: 1 RLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDI 60 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 I+ + K + E + + ++ ++ ++ F V R P ++ G Sbjct: 61 DIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMR--PSLDIEQVATG 118 Query: 211 RIWTGAEAK 219 W G +A Sbjct: 119 EHWYGQQAV 127 >gi|18313592|ref|NP_560259.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] gi|18161137|gb|AAL64441.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2] Length = 548 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 102/242 (42%), Gaps = 18/242 (7%) Query: 2 EFVLK--KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERI 57 +FV + + ++ + Y + P + + I +E +LI + Sbjct: 4 KFVTFGVALALAISVAAIFLVLTTYKPSPPPPQPAKPKIVLVPIDFVLESPAVDKLISAL 63 Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 +++ +++ ++SPGG+ A EA++ + + K V+ +AAS Y ++ A Sbjct: 64 IAVAQRGDVAGIVLLINSPGGTVSATEALYTTVAGINKTK--YAVVNGLAASGAYYVAVA 121 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + I A +S VGSIGV+ + F D + + P+K E+ Sbjct: 122 TERIYATPSSWVGSIGVIAVMWPEEYFYD---IPDYIYTTGPLKYYG---RELTD----- 170 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + ++ FV+ V + R + + I+T +AK++GL+D +GG + + Sbjct: 171 YYNDIERVRLNFVQAVLKGRAGRIKASPDVFETASIFTADQAKELGLVDEIGGIFDAVRD 230 Query: 237 LY 238 + Sbjct: 231 MA 232 >gi|71065564|ref|YP_264291.1| serine peptidase [Psychrobacter arcticus 273-4] gi|71038549|gb|AAZ18857.1| protein C. Serine peptidase. MEROPS family S49 [Psychrobacter arcticus 273-4] Length = 402 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 16/232 (6%) Query: 38 VARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I +RG + L + I++ + D + T++++ + S GG + Sbjct: 54 VATIDVRGLLVPETSSDYRSWGVTGYANLADYIQQANDDYAVTSIVLDIDSGGGYVAGLD 113 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I I ++ KP+ T V A SA Y ++ +++ I A++ S +GSIGV + Sbjct: 114 GITETIY--QSAKPIETFVSGDAYSAAYWLAASTSKITASKKSGIGSIGVYGDHAEKSKA 171 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L+ G+ IK +S K + F+ ++ + +QD ++ S F V+ RNI Sbjct: 172 LEDAGIKIKRFRSGRWKGAFNWFTPLSAEEETRLQDGINESASIFFNYVAAQRNIDVKTI 231 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 +G ++ A+AK++GLID + V S + + + + Sbjct: 232 QGW-EGDDFSAAKAKELGLIDAIADSVAVSSSTKQSNNNPEEYDLNELEKAQ 282 >gi|330883334|gb|EGH17483.1| putative inner membrane peptidase [Pseudomonas syringae pv. glycinea str. race 4] Length = 178 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 2/138 (1%) Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 ++AAS GY+++C N I++A +++GSIGV+ Q P V L K + + + + K Sbjct: 1 DKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRT 60 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 + F E K + Q +D ++ F VS R P ++ G +W G A L Sbjct: 61 LTVFGENTEKGREKFQQDLDITHDLFKNFVSSYR--PQLSIDEVATGEVWLGMAAVDKLL 118 Query: 224 IDVVGGQEEVWQSLYALG 241 +D + +E Sbjct: 119 VDELKTSDEYLAERAKDA 136 >gi|196229320|ref|ZP_03128185.1| peptidase S49 [Chthoniobacter flavus Ellin428] gi|196226552|gb|EDY21057.1| peptidase S49 [Chthoniobacter flavus Ellin428] Length = 269 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 19/201 (9%) Query: 38 VARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 + I I G + D E+ E I + A+++ + SPGG+ Sbjct: 52 IGIIPITGVLMKRPDIFSRVLLGAADMDEISEAINEAGDREDVQAVLLDIDSPGGTVTGT 111 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + A+ + K V SA Y I+ +++I + ++ VGSIGVL Sbjct: 112 PELAAAVAALSRAKYVYAFSDGQMCSAAYWIASQADVIFSTPSARVGSIGVLLPMLDETE 171 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV-SESRNIPYD 202 + G+ + + K+ P + +Q ++D F V + R I Sbjct: 172 AFKQEGLKVDLFAAGKYKSVGVPGVALTDDQRTWLQSMIDEINGEFQAAVLARGRAIDPA 231 Query: 203 KTLVLSDGRIWTGAEAKKVGL 223 +G+ ++G +A + L Sbjct: 232 AM----EGQDFSGQKAFENSL 248 >gi|312114779|ref|YP_004012375.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] gi|311219908|gb|ADP71276.1| peptidase S49 [Rhodomicrobium vannielii ATCC 17100] Length = 285 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 16/218 (7%) Query: 35 SPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 ++A + I G + + + + I ++ D +I+ + S GG A Sbjct: 63 EGNIAVLPIMGTLVRRLSWIEAESGLTSYKTITDDITQLMLDPYIRGVILEIDSYGGEAG 122 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + I+K++ + KP+ +E AASA Y I+CA+ + A T VGSIGV+ + Sbjct: 123 GVFDLADFIRKIQRQTGKPIYAHANENAASAAYAIACAAEKVWVARTGEVGSIGVICAHL 182 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G+ + + K +P + +A +Q VD Y FV+ V+ R + Sbjct: 183 DQSQADEKAGLRWTFISAGERKTWGNPHEPLGDEARARVQADVDWLYDEFVKTVARYRGM 242 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++ G +A VGL D G +E + L Sbjct: 243 RPADIRA-TKADVFRGEDAVGVGLADASGTLDECFDVL 279 >gi|222825130|dbj|BAH22287.1| putative minor capsid protein c [Wolbachia endosymbiont of Cadra cautella] Length = 335 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 +++ E IE D S +++ + SPGG + I + + +K +I ++ A SA Sbjct: 58 EKIHEEIESALEDKSIETILLDIDSPGGEVNGVFDLADFIYESRAKKRIIAIANDDAYSA 117 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 Y I+ ++ I TS VGSIGV+ + F +K G+ +V + K + +P + Sbjct: 118 AYAIASSAEKIFLTRTSGVGSIGVIASHIDQSGFDEKQGIKYTTVFAGSRKNDLNPHEPI 177 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++++ ++ V+ Y V L++ +R++ + ++ ++ G +A ++GL D Sbjct: 178 TSESLENLKSEVNRLYGMLVELIARNRSLSVEAIKN-TEAGLYFGEKAIEMGLADG 232 >gi|219128394|ref|XP_002184399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404200|gb|EEC44148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 216 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 3/151 (1%) Query: 85 AIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +Q+ ++ + V ++AAS GYL+SC ++ IVA+ +++GSIGV+ P V Sbjct: 53 LAAAQLQRFRDAGMQLTVAVEQVAASGGYLMSCVADRIVASPFAVLGSIGVISDIPNVYD 112 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K G+ ++V + K +P + + + V+ F V ++R P Sbjct: 113 RLKKEGIEFQTVTAGKYKRTLTPTKKATKEDFDKTKKDVEDILVLFKEFVHQNR--PQLD 170 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 ++ G W G +A L D + ++V Sbjct: 171 IDQVATGETWFGKDALDRKLCDEIKTVDDVI 201 >gi|330946542|gb|EGH47564.1| peptidase S49, SppA [Pseudomonas syringae pv. pisi str. 1704B] Length = 195 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 10/150 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVIVPMLDFEGGTSRRSSHTALIDVQGVIADKEAASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTKGVILRINSPGGSPVQSGYVYDEIRRLRATKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 A++ I A + SLVGSIGV L Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFGFVGSL 195 >gi|255020331|ref|ZP_05292399.1| Periplasmic serine proteases (ClpP class) [Acidithiobacillus caldus ATCC 51756] gi|254970251|gb|EET27745.1| Periplasmic serine proteases (ClpP class) [Acidithiobacillus caldus ATCC 51756] Length = 420 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 3/202 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR-- 96 A + + + E D A+++ + S GG A + ++ + Sbjct: 74 AYLDATSGLMSYHAIQAMAEDAFADPQVRAVLLEVDSSGGEAGGVFDLALRLRALSKASG 133 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP+ E A SA Y I+ A+ + T+ GSIGV+ + + G+S + Sbjct: 134 KPLWAIADEAALSAAYAIASAAEQLWLTRTAEAGSIGVVAAHVDQSGADAQAGLSYTLLH 193 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 + K + P + + + +Q +D Y FV LV+ R + + RI+ G Sbjct: 194 AGEHKIDGHPHAPLPAEVAADIQADIDRLYDQFVELVASHRRLDAQAVRA-TQARIYRGQ 252 Query: 217 EAKKVGLIDVVGGQEEVWQSLY 238 A + GL D +G ++ +L Sbjct: 253 AALQAGLADRIGTLDDALAALQ 274 >gi|71019091|ref|XP_759776.1| hypothetical protein UM03629.1 [Ustilago maydis 521] gi|46099216|gb|EAK84449.1| hypothetical protein UM03629.1 [Ustilago maydis 521] Length = 949 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 11/196 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +D V + + G I + +++ ++ + ++++ + S GG A E+ Sbjct: 378 DDEVERVGVVYLLGGISSAPGEFSTSSVLKGLKEAAEHKDIKSIVLRIDSGGGDVVASES 437 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I+ A+++V+ KPV+ AAS GY + A++ I+A E ++ GSIGV P + Sbjct: 438 IWDAVRRVREDYGKPVVASFGNTAASGGYYAASAADAILACENTVTGSIGVASLRPTITR 497 Query: 144 -FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 F DK + I++ ++ S E++ +D Y F++ V + R+I + Sbjct: 498 AFFDKFNIGIQTFFTAS--TSQSTLHELDEAQQAKSAKHIDEMYDEFLQKVCDGRSISRE 555 Query: 203 KTLVLSDGRIWTGAEA 218 L+ GR+ TG A Sbjct: 556 VVENLAGGRVMTGLSA 571 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 82/221 (37%), Gaps = 43/221 (19%) Query: 52 ELIERIERISRDDSATALI-----VSLSSPGGSAY-------AGEAIFRAIQKVKNRK-- 97 E+I ++ DD ++ + L S S E + +AI + K K Sbjct: 133 EVIRALKWAQADDRIKGILADFSGLHLPS---SVTPNRLGLAQIEELMQAIHEFKIAKKQ 189 Query: 98 -------PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDK 147 P I + +L++ A + + GSI G+ Q P+ K LD Sbjct: 190 QHGDKARPSIAWADTFNSQGSFLLASAFDELWMQPA---GSIPLTGLSAQIPFFKKVLDY 246 Query: 148 LGVSIKSVKSSPMKAEPSPFS---EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 G+ + + K+ S FS + + +++ V ++ +R D+ Sbjct: 247 FGIRVLAEARREYKSMISTFSREDSLTAPQIHNEAELLGELNRGLVHAIAVNRF--PDED 304 Query: 205 LVLSDGRI--------WTGAEAKKVGLIDVVGGQEEVWQSL 237 L+ ++ ++ EA ++GLI+ + ++ + L Sbjct: 305 PELTSSKVEAWMKQGPFSTREATQLGLINGAAFKRDIIKRL 345 >gi|238785978|ref|ZP_04629941.1| Protein C serine peptidase MEROPS family S49 [Yersinia bercovieri ATCC 43970] gi|238713126|gb|EEQ05175.1| Protein C serine peptidase MEROPS family S49 [Yersinia bercovieri ATCC 43970] Length = 260 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 14/216 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I I+G + + DD+ + + SPGG Sbjct: 42 VAVIPIQGTLVQKLGTLRPYSGMTGYDGIRASFLTAMNDDAVKGICFDIDSPGGEVAGCF 101 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + KP+ + + E A SA Y ++ A++ I+ T VGSIGV+ + Sbjct: 102 DLVDEIYAARGAKPIWSILSENAYSAAYALASAADRIIVPRTGGVGSIGVIVMHVDWSQR 161 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV + + KAE +P+ ++ +A + +Q VD FV VS +R I ++T Sbjct: 162 IKSDGVQVTIITFGSRKAESNPYEALSEEAKKAIQSDVDEMGRLFVSTVSRNRGI-AERT 220 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + ++ + A+ ++GL D V + ++ L L Sbjct: 221 IRDTEAACFLAADGVQLGLADQVAPPDVAFRDLLTL 256 >gi|171186306|ref|YP_001795225.1| peptidase S49 [Thermoproteus neutrophilus V24Sta] gi|170935518|gb|ACB40779.1| peptidase S49 [Thermoproteus neutrophilus V24Sta] Length = 550 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 21/235 (8%) Query: 13 VMLSLVTLTVVYF-----SWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERISRDDS 65 + L +V L V+ + + P + + + I ++ +++ + +S+ Sbjct: 14 LALGVVALLAVFTICQPKAPGEAPQPTKPKIVLVPVDFVIGGPETDRVVKALVELSQRRD 73 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +I+ ++SPGG+ EA++ A++ + K V + AS Y + A+ I AA Sbjct: 74 VAGVILIINSPGGTVSGTEALYTALRGLNKTK--YAVVVGLGASGAYYTAVAAERIYAAP 131 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 +S VGSIGV+ + P L + P+K + + D V+ Sbjct: 132 SSWVGSIGVVAV---IWPDLYLYDAGDYVYTTGPLKYYG--------EDLLSYYDDVEKI 180 Query: 186 YHWFVRLVSESRNIPYDKTLVLS-DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 FV+ V E R + ++T EA ++GL+D VGG + + + Sbjct: 181 RQNFVKAVLEGRRGRIKANPAVFETAGLFTAEEALRLGLVDKVGGVLDAARDMAE 235 >gi|157412171|ref|YP_001481512.1| hypothetical protein APECO1_O1R156 [Escherichia coli APEC O1] gi|99867196|gb|ABF67841.1| conserved hypothetical protein [Escherichia coli APEC O1] Length = 393 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 10/185 (5%) Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP+I V + ASA Y ++ I A +L+GSIGV + + + +GV + + Sbjct: 191 KPIIVSVKGICASACYYAVSPADAIYADSNALIGSIGVRMDHWNLSEIMSTVGVKNEPLT 250 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNIPY-----DKTLVLSDG 210 + K PF ++ + MQ + ++ + F+ V R + L G Sbjct: 251 AGEFKDALDPFHPLSDSTREFMQKEILNTMHEKFITDVELGRGKKLLSRHDADAVSLYSG 310 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNL-SIS 269 R+W +A K GL+D E+ L + S K++N P L L S+S Sbjct: 311 RVWPTPQAVKYGLVDGDLTSVEIRTRLSKM---YSTDTFKNYNEPHRNLRSALGMLMSLS 367 Query: 270 SLLED 274 S +E Sbjct: 368 SNIES 372 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 20/140 (14%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSS------HVEDNSPHVARIAIRGQIEDSQE----- 52 + + T V +SL+ +T V FS+ + E H+A I I G++ E Sbjct: 27 MFRIHTTAKVAMSLIAMTAVGFSFYNLYEQWQDAEGKKDHIAVIRISGEMGTGSETGDGT 86 Query: 53 -LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + + + + A A+I+ S GG I+R I +KN +P I V + S Sbjct: 87 VIATALAKAYNNPHAKAVIIEAESGGGGPSDAIIIYRQINALKNHQPQIERVSDAGCS-- 144 Query: 112 YLISCASNIIVAAETSLVGS 131 +S + A +++ GS Sbjct: 145 --LSSVA----ADKSNKTGS 158 >gi|118355546|ref|XP_001011032.1| probable peptidase, putative [Tetrahymena thermophila] gi|89292799|gb|EAR90787.1| probable peptidase, putative [Tetrahymena thermophila SB210] Length = 265 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 10/211 (4%) Query: 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 ++ I I I+ +Q++ I +I D A A+ + ++SPGGS + I ++ Sbjct: 13 GSYIPVIVINTGIDAKATQDVRNSIAKIDAD-RAKAVALLINSPGGSPVQCDIITEMVKG 71 Query: 93 VKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 + P+ T +++AAS G + + A ETSLVGS+GV+ + + + + Sbjct: 72 FSKKHHLPLYTFANDIAASGGQFLLSIGDKSFAQETSLVGSVGVVGMWFGLGNLAKEYKL 131 Query: 151 SIKSVKSSPMK--AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI---PYDKTL 205 + S+ + A + F ++ P+ + + + + + F+ + + N P ++ Sbjct: 132 KPEIFSSNQEQELAYMNFFEDLTPEKKEKIIRTLKTHHKIFIEHIEKHSNYKISPEEREK 191 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 + D I G +A K GL+D +G + V Sbjct: 192 KIYDASIVLGKDAVKYGLVDEIGQYQSVLNR 222 >gi|303274683|ref|XP_003056657.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461009|gb|EEH58302.1| predicted protein [Micromonas pusilla CCMP1545] Length = 848 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 6/174 (3%) Query: 85 AIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 + ++++ + V ++AAS GY+++C ++ +VA+ +++GSIGV+ + P + Sbjct: 581 LAAAQLTRIRDAGIKLTICVEQVAASGGYMMACVADRLVASPFAVLGSIGVISEVPNLYE 640 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 L K G+ +++ + K +P ++ V+ ++ F V R P Sbjct: 641 RLKKEGIEFQTITAGKFKRTLTPTKKIEKADVEKSTRDIEDVLTLFKGFVKSQR--PGLD 698 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 ++ G W G +A GL D + ++V L + G + I +K + PP+ Sbjct: 699 IDDVATGETWFGEDAMNKGLCDALQTTDDVLLQLLSDG--KEIFSVK-YAPPRT 749 >gi|157161458|ref|YP_001458776.1| S49 family peptidase [Escherichia coli HS] gi|157067138|gb|ABV06393.1| putative peptidase, S49 (protease IV) family [Escherichia coli HS] Length = 288 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 14/227 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVS 72 S S DN VA I I G + + + D T + + Sbjct: 59 SRSDPGYDNVLGVAVIPICGTLVQKLGSLRPYSGMTGYDGIRQAFLTAMEDPDITGICLD 118 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I + +KP+ + E A SA Y I+ A++ I T+ VGS+ Sbjct: 119 IDSPGGEVAGCFDLVDVIYGARGKKPIHAILTESAYSAAYAIASAADRISVPRTAGVGSV 178 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + G+ + + KAE +P E++ +A+ +Q +++ FV Sbjct: 179 GVITMHLDWTQRIKDDGLKVTIITYGSRKAEGAPLRELSDEALAAIQQDINTMGELFVNT 238 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ +R I K + + + A+ ++GL D V + +++L Sbjct: 239 VARNRGIS-AKVIKSTQAACFMAADGVELGLADEVCPPDAAFRNLLE 284 >gi|209883973|ref|YP_002287830.1| periplasmic serine protease [Oligotropha carboxidovorans OM5] gi|209872169|gb|ACI91965.1| periplasmic serine protease [Oligotropha carboxidovorans OM5] Length = 448 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 16/229 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVS 72 + + +A +++ G + ++ E + D S +I+ Sbjct: 61 DLAPLTSITAERIAVVSVIGTLVSRSGYLDAASGLQAYDDIAEAVAVAMDDASVRGVILD 120 Query: 73 LSSPGGSAYAGEAIFRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + S GG + I+ + N KP+ +E A SA Y I+ A++ + + T VG Sbjct: 121 VDSSGGEVGGLFDLVERIKAISSANAKPLWAVANESALSAAYAIASAADRLYVSRTGEVG 180 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + K G++ V + K + + ++ +A +Q VD Y F Sbjct: 181 SIGVVAVHIDESGADAKAGLAWTFVFAGDRKVDGNAHEPLSERARATIQADVDRLYFEFC 240 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 LV+ +R + + ++ I+ G A + GL D VG + + A Sbjct: 241 GLVAGNRGLTSETVRG-TNAAIYRGELAIRAGLADRVGTLDLAIAEMAA 288 >gi|222086932|ref|YP_002545466.1| protease protein [Agrobacterium radiobacter K84] gi|221724380|gb|ACM27536.1| protease protein [Agrobacterium radiobacter K84] Length = 409 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 16/230 (6%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G Q L + ++ D + ++ + + SPGG A + + KPV Sbjct: 76 EISGA-TSYQTLAKDLQVALDDRALHSIAMLIDSPGGEANGADEFAAMVNAANKVKPVTA 134 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SP 159 V M ASA Y I+ A+ IV +E S+VGSIGV+ ++ GV S SP Sbjct: 135 FVSGMGASAAYWIASAAGRIVLSEGSMVGSIGVVLGINDTTLADERRGVRKLQFVSSQSP 194 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEA 218 K +Q +VDS F+ V+ R + G + GAEA Sbjct: 195 NKRP----DPNTEDGKSHIQAMVDSLASVFISKVAAYRGVSQADVIAKFGGGGMKVGAEA 250 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G+ D VG E+V ++ G K +PP+N + + Sbjct: 251 VNAGMADEVGQFEDVLATMIQRG--------KALSPPRNLGGIKMSETIL 292 >gi|193064873|ref|ZP_03045950.1| putative peptidase, S49 (protease IV) family [Escherichia coli E22] gi|192927558|gb|EDV82175.1| putative peptidase, S49 (protease IV) family [Escherichia coli E22] Length = 288 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVS 72 S S DN VA I I G + + + D + + + Sbjct: 59 SRSDPGYDNVLGVAVIPICGTLVQKLGSLRPYSGMTGYDGIRQAFLTAMEDPDISGICLD 118 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG + I + +KP+ + E A SA Y I+ A++ I T VGS+ Sbjct: 119 IDSPGGEVAGCFDLVDVIYGSRGKKPIHAILTESAYSAAYAIASAADRISVPRTGGVGSV 178 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + + G+ + + KAE SP E++ +A+ +Q +++ FV Sbjct: 179 GVITMHLDWTQRIKDDGLKVTIITYGSRKAEGSPLRELSDEALAAIQQDINTMGELFVNT 238 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ +R I K + + + A+ ++GL D V + +++L Sbjct: 239 VARNRGIS-AKVIKSTQAACFMAADGVEIGLADEVCPPDAAFKNLLE 284 >gi|49475134|ref|YP_033175.1| Phage protein gp18 [Bartonella henselae str. Houston-1] gi|49237939|emb|CAF27143.1| Phage protein gp18 [Bartonella henselae str. Houston-1] Length = 369 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 16/218 (7%) Query: 35 SPHVARIAIRGQ-------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 ++A I + G + + L A+++ + S GG A Sbjct: 87 QNNIAIIPVHGTLVRRSAWLGALSGLTSYEGLRASFREAIAQPDVNAVLLDIDSGGGEAG 146 Query: 82 AGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + Q + + KP+ +E A SA Y I+CA++ I A T +VGSIGV+ + Sbjct: 147 GIFDLVEEFQTLSKQYAKPIWAHANEFACSAAYAIACAASQIWIARTGVVGSIGVVCAHL 206 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +K G+ V K + ++ A MQ Y FV V+++R + Sbjct: 207 DQSLADEKQGLKWTFVFEGDHKTHGNSHEPLSDTAQIKMQADCALLYEMFVDWVAKNRPL 266 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 D + + G +A ++GL D G + ++L Sbjct: 267 SADAIRD-TKAETFIGIQALELGLADAQGTLAQALEAL 303 >gi|83310271|ref|YP_420535.1| periplasmic serine protease [Magnetospirillum magneticum AMB-1] gi|82945112|dbj|BAE49976.1| Periplasmic serine protease [Magnetospirillum magneticum AMB-1] Length = 404 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 102/268 (38%), Gaps = 16/268 (5%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR-------------DDSATALIVS 72 + S+ + +A + + G + + ++ D A+++ Sbjct: 46 APSAEMAVTPDGIAIVPVIGTLVARSGYLGAASGLTAYSDIADAIEAAATDPGVRAILLD 105 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + S GG + IQ ++ + KP+ E A SA Y I+C ++ + +T +G Sbjct: 106 VDSSGGEVGGLFDLVDHIQAIRAQCGKPIWAIADEAALSAAYAIACTADRLYLTQTGEIG 165 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 SIGV+ + + G + + + K + +P ++ A +Q VD+ Y F Sbjct: 166 SIGVVAIHVDESAADAQAGRAWSFIHAGASKVDGNPHQPLSDSARATLQADVDALYGKFT 225 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 LV+E R + D ++ ++ G +A GL D VG L S+R Sbjct: 226 ALVAERRRLSPDAIRA-TEAAVYRGDQAVAAGLADKVGTLRVALADLGTSLARPSVRSPV 284 Query: 251 DWNPPKNYWFCDLKNLSISSLLEDTIPL 278 P + ++ + + + + Sbjct: 285 LSKPKETTMSEQTGDIPVLAAVPSAVEA 312 >gi|237721549|ref|ZP_04552030.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449345|gb|EEO55136.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 288 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 10/221 (4%) Query: 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + VA I + G + + L +++ IS + ++ ++ PGG + + I + Sbjct: 69 ADSVAVIILEGTLYSWETYRLEKQLRDISDNPKICGAVLWINGPGGMVAHVDLAAKMIAE 128 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + KP+ T V SA + + A+ +A+ VGS+G++ Y K + K G+ Sbjct: 129 --SSKPIATYVAGTMGSAHFWLGTAAGRTFIASPMCEVGSVGIMLTYQSFKEYFRKQGID 186 Query: 152 IKSVK--SSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + S+ +K E + N + ++ + + F +S + I YD L L Sbjct: 187 YREIYPDSADLKNYETRVIEKENNEE--PIKQRLAVMHRIFCDAISRNLGIAYDPELPLF 244 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 G+I+TG A G ID G E+ + + A + + ++ Sbjct: 245 RGQIFTGDVAVANGYIDQFGTLEDAVKWVLAQATVRKVNEM 285 >gi|51245435|ref|YP_065319.1| capsid protein GPC of phage lambda [Desulfotalea psychrophila LSv54] gi|50876472|emb|CAG36312.1| related to capsid protein GPC of phage lambda [Desulfotalea psychrophila LSv54] Length = 433 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 101/276 (36%), Gaps = 19/276 (6%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D VA I + G + + + I++ D S +++ + S GG Sbjct: 68 SDEEKRVAIIPVIGSLVARNRGFDDGSGLRSYRTIAHEIDQALADQSILGIVLDIDSYGG 127 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET--SLVGSIGVLF 136 +A + I++ KP+ + SA I+ A + ++ + +GS+G + Sbjct: 128 AAAGCARLAGHIKEAGLVKPIYANIDLNCFSAATWIASACTKVFLSDGLDAGMGSVGCIA 187 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + +K G +V K + SP ++ MQ VD H F V+E+ Sbjct: 188 IHRDQSVKNEKEGEVYTAVYFGERKNDFSPHQPLSGDLQTKMQAGVDRMGHAFAAAVAEN 247 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD---WN 253 R + L + + G +A GL D V E L A ++ + + Sbjct: 248 RGLDLQAVLKM-QAGTFYGQDAITHGLADGVASLTETVALLGAEAEERERASVHNTTGLT 306 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 KN + +S+LL + + K+ + A Sbjct: 307 QAKNRGETMSLSEKLSALLAEEGAVQALAKLGYIAA 342 >gi|330877855|gb|EGH12004.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. race 4] Length = 196 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 10/146 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-----SQELIERIE 58 + K+ T + V + V + S H A I ++G I D ++ ++ ++ Sbjct: 48 IFFKLLTFAFL--FVAVVVPMLDFEGGTSRRSSHTALIDVQGVIADKESASAENIVTALQ 105 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLIS 115 + D+ +I+ ++SPGGS ++ I++++ KP V + ++ AS Y I+ Sbjct: 106 KAFEDEKTRGVILRINSPGGSPVQSGYVYDEIRRLRAAKPDIKVYAVITDLGASGAYYIA 165 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYV 141 A++ I A + SLVGSIGV + Sbjct: 166 SAADQIYADKASLVGSIGVTAAGFWF 191 >gi|91782184|ref|YP_557390.1| serine peptidase [Burkholderia xenovorans LB400] gi|91686138|gb|ABE29338.1| protein C, Serine peptidase, MEROPS family S49 [Burkholderia xenovorans LB400] Length = 323 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 19/218 (8%) Query: 38 VARIAIRGQIEDS------------------QELIERIERISRDDSATALIVSLSSPGGS 79 +A I ++G + + + D + A+++ + SPGG Sbjct: 63 IAVIQVQGMLLSRTGAAGPCLMTGADFVTGYDGIRANVSAALADPAVRAIVLDIDSPGGE 122 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI + RKP++ +E A SA Y ++ A + T G +GVL + Sbjct: 123 IAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASACEQVTVPRTGGTGGVGVLVVHV 182 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 L G+++ + S KA+ + + ++ A + ++ VD++ + +V+ +R + Sbjct: 183 DFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADVDATAKMLIAMVAHNRGL 242 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + ++G + GA + GL D V +E SL Sbjct: 243 SQAQVRD-TEGATYLGAAGVRAGLADAVMSPDEALLSL 279 >gi|260174732|ref|ZP_05761144.1| putative proteinase [Bacteroides sp. D2] gi|315922992|ref|ZP_07919232.1| protease [Bacteroides sp. D2] gi|313696867|gb|EFS33702.1| protease [Bacteroides sp. D2] Length = 288 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 8/220 (3%) Query: 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + VA I + G + + L +++ IS + ++ ++ PGG + + I + Sbjct: 69 ADSVAVIILEGTLYSWETYRLEQQLRDISGNPKICGAVLWINGPGGMVAHVDLAAKMIAE 128 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + KP+ T V SA + + A+ +A+ VGS+G++ Y K + K G+ Sbjct: 129 --SSKPIATYVAGTMGSAHFWLGTAAGRTFIASPMCEVGSVGIMLTYQSFKEYFRKQGID 186 Query: 152 IKSVK--SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + S+ +K + E + + Q +V + F +S + I YD L L Sbjct: 187 YREIYPDSADLKNYETRAIEKDNNEEPIKQRLV-VMHRIFCDAISRNLGIAYDPELPLFR 245 Query: 210 GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 G+I+TG A G ID G E+ + + A + + ++ Sbjct: 246 GQIFTGDVAVANGYIDQFGTLEDAVKWVLAQATVRKVNEM 285 >gi|212710697|ref|ZP_03318825.1| hypothetical protein PROVALCAL_01764 [Providencia alcalifaciens DSM 30120] gi|212686394|gb|EEB45922.1| hypothetical protein PROVALCAL_01764 [Providencia alcalifaciens DSM 30120] Length = 168 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 2/146 (1%) Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 +++C +N IVAA S++GSIGV+ Q P + L K V ++ + K + E Sbjct: 1 MMACIANKIVAAPFSIIGSIGVVAQVPNIHRLLKKHDVDVELHTAGEYKRTLTMLGENTE 60 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + + + ++S++ F V ++R P ++ G W G +A + GL+D +G ++ Sbjct: 61 QGRKKFVEDLNSTHELFKDFVHQNR--PSLDIAAVATGEYWYGTQALEKGLVDQIGVSDD 118 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNY 258 + SIR + + + Sbjct: 119 LIIDAIETKEIVSIRFVMSKKMVERF 144 >gi|226940574|ref|YP_002795648.1| Periplasmic serine proteases (ClpP class) [Laribacter hongkongensis HLHK9] gi|226715501|gb|ACO74639.1| Periplasmic serine proteases (ClpP class) [Laribacter hongkongensis HLHK9] Length = 421 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 14/226 (6%) Query: 34 NSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGGSA 80 S VA I + G + + + RD A+++ + SPGG Sbjct: 70 TSAGVAVIPVMGPLMQRGSWLDAMCGMTSYDRVNALVSAAMRDQDVRAVLLEIDSPGGEV 129 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 A+ ++ KPV +E A SA Y I+ + + + T++VGSIGV+ + Sbjct: 130 AGLFALCDRLKAAATSKPVWAYANEAACSAAYAIASSVDRLYLPRTAMVGSIGVIAMHVD 189 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 G + V + KA+ + + ++ +A +Q +D Y FV V+ R + Sbjct: 190 QSARDATQGYTYTPVFAGDKKADGNSHAPLSDRARTTLQTEIDRLYSMFVDHVATGRRLE 249 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSI 246 + + + A D + +EV L S+ Sbjct: 250 KQAVID-TQAGLLNADAAVAGQFADGIASFDEVLAQLADTAKPASV 294 >gi|218507288|ref|ZP_03505166.1| peptidase S49 [Rhizobium etli Brasil 5] Length = 159 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 10/168 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-EDSQELIERIERISRDDSATALIVS 72 M+++++ + +S V+D I G ++ + D S A++++ Sbjct: 1 MIAVISFFGIVAQHASQVDD---------ISGPGGTSTERVANSYRAAKSDPSVKAIVIN 51 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 SPGG+ + + I + KPVI +V+ + ASA Y ++ + + IV ++ GSI Sbjct: 52 FDSPGGNVSGVQVLADEIFNGRGDKPVIAQVNSLCASAAYWVASSCDEIVMTPGAMAGSI 111 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 GV + V +D G+ + + K E + F ++ +A Q Q Sbjct: 112 GVYSLHQDVSRAVDAAGLKFTFISAGKYKVEGNAFEPLSDEAAQAAQS 159 >gi|323179369|gb|EFZ64937.1| head-tail preconnector protein GP5 domain protein [Escherichia coli 1180] Length = 360 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + L + Sbjct: 1 MIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGHLAQA 60 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 GV I + + K + + F + + Q MQ VD+++ F V+ + + + Sbjct: 61 GVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRVDAAHRMFAEKVAMYTGLSVEAVTG-T 119 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + ++ G A K GL D + + + A Sbjct: 120 EAAVFEGQSAIKAGLADELINASDAISVMAA 150 >gi|320539111|ref|ZP_08038782.1| peptidase family S49 domain-containing protein [Serratia symbiotica str. Tucson] gi|320030749|gb|EFW12757.1| peptidase family S49 domain-containing protein [Serratia symbiotica str. Tucson] Length = 286 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 14/214 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I ++G + + + D + + + SPGG Sbjct: 69 IAVIPVQGTLVQKLGSLRPYSGMTGYDGIRQSFLTAMNDPEVAGICLDIDSPGGEVAGCF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I KP+ + + E A SA Y I+ A++ I T VGSIGV+ + Sbjct: 129 DLVDEIYHTHGSKPIHSILTENAYSAAYAIASAADRIHVPRTGGVGSIGVIVIHCDWSQR 188 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + + G+++ + KAE +P+ +++ +A +QD VD+ FV V+ +R I Sbjct: 189 IKEDGLAVSIITYGNRKAESNPYVKLSDQARAAIQDDVDTMGRLFVSTVARNRGISEKTI 248 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + + A+ ++GL D V + ++ L+ Sbjct: 249 RN-TQAACFLAADGVQLGLADAVMTPDAAFRKLF 281 >gi|307942416|ref|ZP_07657767.1| minor capsid protein C [Roseibium sp. TrichSKD4] gi|307774702|gb|EFO33912.1| minor capsid protein C [Roseibium sp. TrichSKD4] Length = 281 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 17/218 (7%) Query: 38 VARIAIRGQ------------IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 VA I++ G I + D A+ + +SSPGG Sbjct: 61 VAVISVYGFLVSDLPFHGASWITGYNGIRLAFLAALSDPDIRAIALDVSSPGGMVSGCFE 120 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I++ + KP++ V +++ASA + IS A+ +I T VGSIGV+ + Sbjct: 121 LVEFIRQARGEKPIMAIVRDLSASAAFAISSAAEVITVPNTGSVGSIGVVRMHGDFSKMF 180 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 +G+ + + S K + +P+ E+ + Q VD+ F V+ R I L Sbjct: 181 SDVGLKVTLIHSGARKVDGNPYQELPDTVRESWQASVDAVRDLFADHVAAGRGIDRQTVL 240 Query: 206 VLSDGRIWTG----AEAKKVGLIDVVGGQEEVWQSLYA 239 ++ ++ G A A+++GLID + ++ + SL Sbjct: 241 E-TEAELYDGPLNLARAREIGLIDQIMSPDKAFASLIE 277 >gi|6723247|dbj|BAA89643.1| gp18 [Wolbachia phage WO] Length = 350 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 100/219 (45%), Gaps = 14/219 (6%) Query: 30 HVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSP 76 +V++N A I I G + +++ E IE D+ +++ + SP Sbjct: 41 YVKNNIEKTAIIPIHGILTKKPEAFDDFLGMTSYEKMQEEIEEALEDEKVEIILLDIDSP 100 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GG + I +++K +I ++ A SA Y I+ ++ I TS VGSIGV+ Sbjct: 101 GGEVNGIFDLADFIYNARSKKRIIAIANDDAYSAAYAIASSAEKIFLTRTSGVGSIGVIA 160 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + F +K G+ ++ + K + +P + ++++ ++ V+ Y V L++ + Sbjct: 161 SHIDQSGFDEKQGIKYSTIFAGSRKNDLNPHEPITSESLENLKSEVNRLYGMLVELIARN 220 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 R++ + ++ ++ G +A ++GL D V E Sbjct: 221 RSLSIEAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 258 >gi|288560933|ref|YP_003424419.1| peptidase S49 family [Methanobrevibacter ruminantium M1] gi|288543643|gb|ADC47527.1| peptidase S49 family [Methanobrevibacter ruminantium M1] Length = 285 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 20/242 (8%) Query: 29 SHVEDNSPHVARIAIRGQIEDSQ----------ELIERIERISRDDSATALIVSLSSPGG 78 S++ ++ +A I I I E+ + + +++ + S GG Sbjct: 32 SNLAVDNDEIAVITISDTITYGDNSTSAHTSKKEIESELNDAYSNPKIKGIVLDIDSGGG 91 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 S A + I I+ K+ KP+++ + + Y I+ A++ I A+ +S + G+ Y Sbjct: 92 SLVASDEISDLIK--KSPKPIVSYIGDKGFDEAYQIASATDYIFASSSSSL--GGIGLSY 147 Query: 139 PYVKPFLDKLGVSIKSVKSSPM---KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + D+ + V + S + + Q +VD Y F++ ++E Sbjct: 148 INTDRYSDE---KVTGVFNEKYLKNNKTKSNSKVKSANDLANAQKMVDQDYTLFIKKIAE 204 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 +RN+ D L+ G+ + G EAKK+GLID +G + + + L + I P Sbjct: 205 NRNLTADYVAELAHGKKYNGNEAKKLGLIDEIGSKSQSIEKAAKLSNATNYTVITYPEPQ 264 Query: 256 KN 257 K Sbjct: 265 KK 266 >gi|254671315|emb|CBA08708.1| serine protease [Neisseria meningitidis alpha153] Length = 204 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 8/145 (5%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-----QELIERIERISRDDSA 66 ++++L+ + + N+PH A + + G+I + ++L + +E ++ A Sbjct: 54 LILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKDGMEAAYKNPQA 113 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP---VITEVHEMAASAGYLISCASNIIVA 123 A+++ +SPGGS F I+++K + P V +M AS Y I+ A++ I A Sbjct: 114 KAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASGCYYIAAAADKIYA 173 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKL 148 +S+VGSIGV+ K Sbjct: 174 DPSSIVGSIGVIGSSFDATGPDGKN 198 >gi|281425071|ref|ZP_06255984.1| putative protease transmembrane protein [Prevotella oris F0302] gi|281400915|gb|EFB31746.1| putative protease transmembrane protein [Prevotella oris F0302] Length = 329 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 6/204 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L + + + + ++SPGG A+ + + ++ KP++T +M Sbjct: 119 SSKQLQSDLLAAEANPQISCHFLHINSPGGEAWYLDRLSETLRSC--EKPILTFYEQMCC 176 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SAGY I C I A + VG IG + + +P+ KLG+ K++ + F Sbjct: 177 SAGYYIGCHGQRIYAMTQNDYVGCIGTMCSFYDFEPYFAKLGIKKVEAKATNSDLKNKVF 236 Query: 168 SEVNP-KAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLI 224 ++ K Q +++++D F+ V R+ D + + G + +A ++GL Sbjct: 237 DDLRHGKDAQFVKEILDPMNVQFLDEVRSQRSKLADLPDDVPVLRGETFYTPQAVEIGLA 296 Query: 225 DVVGGQEEVWQSLYALGVDQSIRK 248 D E +G + + K Sbjct: 297 DGSRTMVEAIAEASTMGREYTEAK 320 >gi|220920634|ref|YP_002495935.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219945240|gb|ACL55632.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 420 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 1/187 (0%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + ER D + + SPGG + + + KPV HE A SA Y Sbjct: 98 IRRAFERGMADPEVRGIALICDSPGGEVAGNFDLVDVLYAARGAKPVRAFAHEGAYSAAY 157 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I+ + T VGSIGV+ + L + G+ + + + K + + + P Sbjct: 158 SIASAADRIIVSRTGGVGSIGVVTAHIDASGALAQAGLKVTFIFAGEHKVDGNSAEPLPP 217 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + +Q +D Y FV V+ +R++ + + EA + GL D VG ++ Sbjct: 218 EVKDRIQARIDGLYDIFVAAVARNRSLKETAVRA-TKALTYAADEAIRTGLADAVGALDD 276 Query: 233 VWQSLYA 239 + A Sbjct: 277 AVAAFAA 283 >gi|323179198|gb|EFZ64768.1| head-tail preconnector protein GP5 domain protein [Escherichia coli 1180] Length = 225 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 63/147 (42%), Gaps = 13/147 (8%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVN 171 L + GV I + + K + + F + Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFEALP 224 >gi|307565406|ref|ZP_07627895.1| peptidase, S49 (protease IV) family protein [Prevotella amnii CRIS 21A-A] gi|307345856|gb|EFN91204.1| peptidase, S49 (protease IV) family protein [Prevotella amnii CRIS 21A-A] Length = 274 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 6/201 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L + + + + ++SPGG A+ + + ++ K KP++T +M Sbjct: 64 SSKQLEADLLAAEANPQISCHFLHINSPGGEAWYLDRLSETLRNCK--KPILTFYEKMCC 121 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SAGY I C N I A E G IG + + + + KLG+ K++ + F Sbjct: 122 SAGYYIGCHGNRIYALTENDYAGCIGTMCSFYDFEDYFAKLGIKKVEAKATNSDLKNKTF 181 Query: 168 SEVNP-KAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLI 224 ++ K +Q++++ F+ V R + + G + +A ++GL Sbjct: 182 DDLRHGKDEAFVQNILNPLNAQFLAEVRGQRKSLAELPDDAPVLRGETFYTPKAVEIGLA 241 Query: 225 DVVGGQEEVWQSLYALGVDQS 245 D E +G + S Sbjct: 242 DGSKTMAEAVAEAMTMGSEYS 262 >gi|297626322|ref|YP_003688085.1| SppA, Periplasmic serine proteases [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922087|emb|CBL56655.1| SppA, Periplasmic serine proteases [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 418 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 31/245 (12%) Query: 41 IAIRGQIED--------------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 I++ G I+ ++ + I+ ++ D SA L++ + +PGGS AI Sbjct: 123 ISVSGTIQASGGSSSGMFSSATYGYDVAKLIDSLTAD-SAAGLVLLMDTPGGSINGSRAI 181 Query: 87 FRAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ----YPY 140 A+ + + K V M+AS G N I A + ++VGSIGV+ Y Sbjct: 182 ADAVDRYEQRTGKKSFAFVEGMSASGGMYAMAGVNRIYADQGTMVGSIGVIMGPFARYRD 241 Query: 141 VK---------PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 V G+ + K + F ++ K + + Y FV Sbjct: 242 VTAVDGGLLGNGVTASGGIDQFYLTQGEAKDFGNAFRDMTQKERDVYTAGLSREYDAFVN 301 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIK 250 VS SR I + ++ AK L+D V G+EE ++ + GVD K+ Sbjct: 302 WVSTSRGIAPETIRNDLGAYMFDAQTAKDKHLVDDVLGREEAFRQIARDAGVDPDQTKLV 361 Query: 251 DWNPP 255 P Sbjct: 362 TDAEP 366 >gi|325268614|ref|ZP_08135244.1| S49 family peptidase [Prevotella multiformis DSM 16608] gi|324989142|gb|EGC21095.1| S49 family peptidase [Prevotella multiformis DSM 16608] Length = 329 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 6/204 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L + + + + ++SPGG A+ + + ++ KP++T +M Sbjct: 119 SSKQLQSDLLAAEANPQISCHFLHINSPGGEAWYLDRLSETLRSC--EKPILTFYEQMCC 176 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SAGY I C I A + VG IG + + +P+ KLG+ K++ + F Sbjct: 177 SAGYYIGCHGQRIYAMTQNDYVGCIGTMCSFYDFEPYFAKLGIKKVEAKATNSDLKNKVF 236 Query: 168 SEVNP-KAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLI 224 ++ K + +++++D F+ V R+ D + G + +A ++GL Sbjct: 237 DDLRHGKDAKFVKEILDPMNVQFLDEVRSQRSKLADLPDDAPVLRGETFYTPQAVEIGLA 296 Query: 225 DVVGGQEEVWQSLYALGVDQSIRK 248 D E +G + + K Sbjct: 297 DGSRTMVEAISEASTMGREYTEAK 320 >gi|299142750|ref|ZP_07035879.1| phage protein gp18 [Prevotella oris C735] gi|298575779|gb|EFI47656.1| phage protein gp18 [Prevotella oris C735] Length = 329 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 10/203 (4%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L + + + + ++SPGG A+ + + ++ +KP++T +M Sbjct: 119 SSKQLEADLIAAEANPQISCHFLHINSPGGEAWYLDRLSETLRNC--QKPILTFYEQMCC 176 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SPMKA-EP 164 SAGY I C N I A E VG IG + + + + KLG+ K+ S +K Sbjct: 177 SAGYYIGCHGNRIYALTENDYVGCIGTMCSFYDFEDYFAKLGIKKVEAKATNSDLKNKTF 236 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVG 222 N + +Q++++ F+ V R + + + + G + +A ++G Sbjct: 237 DDLRHGNDE--AFVQNILNPLNAQFLAEVRGQRKLLAELPEDAPVLRGETFYTPQAVEIG 294 Query: 223 LIDVVGGQEEVWQSLYALGVDQS 245 L D + +G + + Sbjct: 295 LTDGSRTMAQAVAEAMTMGSEYT 317 >gi|301022675|ref|ZP_07186530.1| peptidase, S49 family protein [Escherichia coli MS 196-1] gi|299881171|gb|EFI89382.1| peptidase, S49 family protein [Escherichia coli MS 196-1] Length = 222 Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 13/144 (9%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG A Sbjct: 78 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQAAGAF 137 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 138 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 197 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFS 168 L + GV I + + K + + F Sbjct: 198 LAQAGVDITLIYAGAHKVDGNQFE 221 >gi|304383386|ref|ZP_07365852.1| possible protease [Prevotella marshii DSM 16973] gi|304335554|gb|EFM01818.1| possible protease [Prevotella marshii DSM 16973] Length = 331 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 6/200 (3%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L + + + + ++SPGG A+ + + ++ +KP++T +M Sbjct: 120 SSKQLAADLHAAEANPQISCHFLHINSPGGEAWYLDRLSETLRAC--QKPILTFYEQMCC 177 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SAGY I C N I A + VG IG + + +P+ +KLG+ K++ + F Sbjct: 178 SAGYYIGCHGNRIYALTDNDYVGCIGTMCSFYDFEPYFEKLGIKRVEAKATNSDLKNKTF 237 Query: 168 SEVNP-KAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVGLI 224 ++ K + + D++D F+ V R+ + + G + +A ++GL Sbjct: 238 DDLRHGKDEKFVHDILDPLNVQFLAEVRSQRSQLAELPDDAPVLRGETFYTPQAVELGLT 297 Query: 225 DVVGGQEEVWQSLYALGVDQ 244 D +E +G + Sbjct: 298 DGSHTMQEAIAEAVTMGREY 317 >gi|171911267|ref|ZP_02926737.1| peptidase S49 [Verrucomicrobium spinosum DSM 4136] Length = 233 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 19/211 (9%) Query: 33 DNSPHVARIAIRGQIE--------------DSQELIERIERISRDDSATALIVSLSSPGG 78 + +VA I I G + D + + + ++ + +++ ++SPGG Sbjct: 15 EGKSNVAVIPIYGVLAKNAGLLQQVCMGFCDINPIAHAVNQAAKAKDVSTIVLDIASPGG 74 Query: 79 SAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 A++ K V E AS+ Y + +N I ++ VGSIG Sbjct: 75 QVKGIRETASAVRAAAKTRGKTVYAFSDENMASSAYYLGSQANEIYVTPSATVGSIGTYL 134 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + L G+ ++ + K P ++ ++Q VD WF V + Sbjct: 135 AWLDPTMKLAMEGLKLEFFGAGQHKGMGLPGKPLSEGDRVLLQATVDEFNGWFTSAVQGA 194 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 R G+ ++G A V L D + Sbjct: 195 R---PKVVNATMQGQSFSGERAVGVRLADGI 222 >gi|323453936|gb|EGB09807.1| hypothetical protein AURANDRAFT_23965 [Aureococcus anophagefferens] Length = 259 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 95/230 (41%), Gaps = 10/230 (4%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK--NRKPVIT 101 RG + + +++ + ++ L++ ++SPGGS + +++ V Sbjct: 20 RGAVARLEAVVDLLSAVATRHD--ELVLRVTSPGGSVSDFGLAASLVLRLRRTTGVGVTA 77 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V +AAS GY+++ S+ +VAA + VGS+GV+ P LD+ + + K Sbjct: 78 AVDVVAASGGYMLAVCSDRVVAAPFAFVGSVGVITMIPNFHRVLDREKIDFLQFTAGRYK 137 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 +P +E +A +Q ++ + F LV+ +R ++ G W + A Sbjct: 138 RTVTPVTEATDEAKAKLQSELEEIHGAFKDLVATNRADS--DIEDVATGEAWIASLAPP- 194 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSL 271 G++D + E+ + A Q + +K L + L Sbjct: 195 GVVDDLMTSGELLREKMA---TQDVVLVKPARERPRSLLEALNAAVLGGL 241 >gi|258611700|ref|ZP_05711610.1| peptidase [Listeria monocytogenes FSL R2-503] gi|258605514|gb|EEW18122.1| peptidase [Listeria monocytogenes FSL R2-503] Length = 193 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 16/133 (12%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E + +A +++ G I+D+ + ++++E++ DD+ +++ ++SPG Sbjct: 57 EGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRNDDNIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 G I I +++ + P + MAAS GY IS ++ I A++ +L GS+GV+ Sbjct: 117 GGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPADKIFASKETLTGSLGVI 176 Query: 136 FQYPYVKPFLDKL 148 Q + K+ Sbjct: 177 MQGYDYSELMKKI 189 >gi|303235964|ref|ZP_07322567.1| peptidase, S49 (protease IV) family protein [Prevotella disiens FB035-09AN] gi|302483837|gb|EFL46829.1| peptidase, S49 (protease IV) family protein [Prevotella disiens FB035-09AN] Length = 330 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 6/204 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L E +++ + T + +++PGG A+ + + ++ KP+IT ++ Sbjct: 119 SSKQLEEDLKQAENNPQITCHFLHINTPGGEAWYMDRLSETLRNC--NKPIITLCEQLCC 176 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 SAGY I C + + ++G IG + + + + KLG++ K++ + F Sbjct: 177 SAGYYIGCHGQRVYGLTQNDMIGCIGTMCSFYDFEEYYKKLGITKVEAKATNSDLKNKMF 236 Query: 168 SEVNP-KAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWTGAEAKKVGLI 224 ++ K+ Q +++V++ F+ V E R + G + +EA+KVGLI Sbjct: 237 DDLRKGKSEQYVREVLNPLCAQFLTEVREQRKALASLADDAPVLRGETFLSSEAEKVGLI 296 Query: 225 DVVGGQEEVWQSLYALGVDQSIRK 248 D EV +G + + ++ Sbjct: 297 DGCKTMIEVLAEAVTIGKEYAEKE 320 >gi|289673839|ref|ZP_06494729.1| putative periplasmic protease [Pseudomonas syringae pv. syringae FF5] Length = 131 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 3/133 (2%) Query: 79 SAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 ++ + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q Sbjct: 1 MVHSYGLASSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQ 60 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P V L K + + + + K + F E K + Q +D ++ F V+ R Sbjct: 61 LPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR 120 Query: 198 NIPYDKTLVLSDG 210 P ++ G Sbjct: 121 --PQLSIDEVATG 131 >gi|265763947|ref|ZP_06092515.1| protease [Bacteroides sp. 2_1_16] gi|263256555|gb|EEZ27901.1| protease [Bacteroides sp. 2_1_16] Length = 345 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 103/237 (43%), Gaps = 11/237 (4%) Query: 21 TVVYFSWSSHVEDNS-PHVARIAI--RGQIED--SQELIERIERISRDDSATALIVSLSS 75 V Y + ++D S P A + + G + + L I +D + +++ ++ Sbjct: 111 AVPYVAGRWELDDASLPQGAVVVLTCEGVLYSWETYRLERYISAAMANDRISGVVLFVNG 170 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL-ISCASNIIVAAETSLVGSIGV 134 PGG + + + I+ ++ KP++ + + ASA + +S + V++ +GS GV Sbjct: 171 PGGMITRVDVLEKLIR--QSPKPIVAYITGVCASAHFWFVSACARRFVSSPMDEIGSCGV 228 Query: 135 LFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 ++ + K + ++G+ I+ + S+ +K E ++++ + +H F + Sbjct: 229 VYTFQSFKEYYAQMGIEIEDIYPDSADLKNRAYRDKEEKQDDT-LIKENLSFYHHLFAQA 287 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ + + YD L G+ + A G +D G E+ + A + K+ Sbjct: 288 IARNLGVKYDAQDPLFRGQTFFADTALAKGYVDAYGSLEDAILWIAAQKTVKRANKM 344 >gi|53713622|ref|YP_099614.1| protease [Bacteroides fragilis YCH46] gi|52216487|dbj|BAD49080.1| probable protease [Bacteroides fragilis YCH46] Length = 345 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 103/237 (43%), Gaps = 11/237 (4%) Query: 21 TVVYFSWSSHVEDNS-PHVARIAI--RGQIED--SQELIERIERISRDDSATALIVSLSS 75 V Y + ++D S P A + + G + + L I +D + +++ ++ Sbjct: 111 AVPYVAGRWELDDASLPQGAVVVLTCEGVLYSWETYRLERYISAAMANDRISGVVLFVNG 170 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL-ISCASNIIVAAETSLVGSIGV 134 PGG + + + I+ ++ KP++ + + ASA + +S + V++ +GS GV Sbjct: 171 PGGMITRVDVLEKLIR--QSPKPIVAYITGVCASAHFWFVSACARRFVSSPMDEIGSCGV 228 Query: 135 LFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 ++ + K + ++G+ I+ + S+ +K E ++++ + +H F + Sbjct: 229 VYTFQSFKEYYAQMGIEIEDIYPDSADLKNRAYRDKEEKQDDT-LIKENLSFYHHLFAQT 287 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ + + YD L G+ + A G +D G E+ + A + K+ Sbjct: 288 IARNLGVKYDAQDPLFRGQTFFADTALAKGYVDAYGSLEDAILWVSAQKTVKRANKM 344 >gi|163804098|ref|ZP_02197885.1| protease IV [Vibrio sp. AND4] gi|159172087|gb|EDP57039.1| protease IV [Vibrio sp. AND4] Length = 160 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 +++ IVA T+L GSIG+ + +KLG+S V +SP + + ++ A Sbjct: 1 MSADKIVAQPTTLTGSIGIFSVITTFEKGFNKLGISTDGVGTSPFSGDG-ITTGLSDGAS 59 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 Q Q ++ Y F+ LV +R + ++ ++ GR+WTG +A GL+D +G ++ Q Sbjct: 60 QAFQLGIEHGYKRFISLVGSNREMSLEEVDKVAQGRVWTGQDAMSFGLVDQMGDFDDAVQ 119 Query: 236 SLYALGVDQSIRK--IKDWNPPKNYWFCDLKNLSISSL 271 L ++ + +++ P + + N SL Sbjct: 120 LAAKLAEVENYQLYWVEEPLSPAEQFVQEFMNQVKVSL 157 >gi|329115488|ref|ZP_08244236.1| Peptidase [Acetobacter pomorum DM001] gi|326695198|gb|EGE46891.1| Peptidase [Acetobacter pomorum DM001] Length = 347 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 93/266 (34%), Gaps = 22/266 (8%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIER 59 MLS V T + +++V N VA I + G I D L ++ Sbjct: 80 TMLSAVADTGKRMNGTNNVTLNKQGVATIPVMGPIFPRANLLTEFSGATDLSSLSADLQA 139 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 +++ SPGG + I + KPV V MAASA Y ++ + Sbjct: 140 ALSSADVKQILMVFDSPGGVTTGVSDMASQI--AASSKPVTAFVPGMAASAAYWLASQCS 197 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 I+ T+LVGSIGV+ + + V S+ + ++ Sbjct: 198 TILMDNTALVGSIGVVMSGAKQVEPDANGMMEVDIVSSNAPNKRLDVT---SDDDQAQIR 254 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 V+D F++ V++ R+ D G + A G+ D + +L Sbjct: 255 TVLDDLEAVFLQAVAQGRHTSVDNVKQNFGQGGMKVANSAISAGMADGISTLS---ATLA 311 Query: 239 ALGVDQSIRKIKDWNPPKNYWFCDLK 264 LG + P + DL+ Sbjct: 312 KLGAANPPKTPVKSAPRRAAAMADLE 337 >gi|60681898|ref|YP_212042.1| putative proteinase [Bacteroides fragilis NCTC 9343] gi|60493332|emb|CAH08117.1| putative proteinase [Bacteroides fragilis NCTC 9343] Length = 286 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 103/237 (43%), Gaps = 11/237 (4%) Query: 21 TVVYFSWSSHVEDNS-PHVARIAI--RGQIED--SQELIERIERISRDDSATALIVSLSS 75 V Y + ++D S P A + + G + + L I +D + +++ ++ Sbjct: 52 AVPYVAGRWELDDASLPQGAVVVLTCEGVLYSWETYRLERYISAAMANDRISGVVLFVNG 111 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL-ISCASNIIVAAETSLVGSIGV 134 PGG + + + I+ ++ KP++ + + ASA + +S + V++ +GS GV Sbjct: 112 PGGMITRVDVLEKLIR--QSPKPIVAYITGVCASAHFWFVSACARRFVSSPMDEIGSCGV 169 Query: 135 LFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 ++ + K + ++G+ I+ + S+ +K E ++++ + +H F + Sbjct: 170 VYTFQSFKEYYAQMGIEIEDIYPDSADLKNRAYRDKEEKQDDT-LIKENLSFYHHLFAQA 228 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ + + YD L G+ + A G +D G E+ + A + K+ Sbjct: 229 IARNLGVKYDAQDPLFRGQTFFADTALAKGYVDAYGSLEDAILWVAAQKTVKRANKM 285 >gi|331671242|ref|ZP_08372061.1| minor capsid protein C (GPC) [Escherichia coli TA271] gi|331061535|gb|EGI33475.1| minor capsid protein C (GPC) [Escherichia coli TA271] Length = 294 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 1/142 (0%) Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 +++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + L+K GV I Sbjct: 1 MRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEI 60 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + S K + +P+S + + +Q +D++ F + VS + L ++ + Sbjct: 61 TLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVLD-TEAAV 119 Query: 213 WTGAEAKKVGLIDVVGGQEEVW 234 ++G EA GL D + + Sbjct: 120 YSGQEAIDAGLADELVNSTDAI 141 >gi|320660346|gb|EFX27826.1| Head-tail preconnector protein GP5 (Contains: Scaffold protein GP6 (Head protein GP6)) [Escherichia coli O55:H7 str. USDA 5905] Length = 119 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 57/117 (48%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + SPGG A I +++ +KPV ++ A SA L++ A + + +TS +GSI Sbjct: 1 MDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSI 60 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 GV+ + L + GV I + S K + + F + + Q MQ +D++ F Sbjct: 61 GVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMF 117 >gi|327311349|ref|YP_004338246.1| protease IV [Thermoproteus uzoniensis 768-20] gi|326947828|gb|AEA12934.1| protease IV, putative [Thermoproteus uzoniensis 768-20] Length = 533 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 25/263 (9%) Query: 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 + I I + L+ I R+ +I+ + SPGG+ A EA++ A++ Sbjct: 44 KERIVVIPITAPLTSCWVNPLLPYILRL-NSSDVAGIILYIDSPGGTLDATEALYGALKG 102 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 + KPV V + AS + +S A+ I A+ SLVG+IG + + P + + + Sbjct: 103 L--GKPVYAVVSGLDASGAFYVSMAAEKIYASPGSLVGNIG---AWAVINPAVFWTPIPL 157 Query: 153 KSVKSSPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDG 210 + S K S F D VD + F+ +V +SR + +L+ G Sbjct: 158 EIFPSGYEKLFGMSLFG---------YYDSVDQAAASFLSVVLKSRGDRLNASADLLATG 208 Query: 211 RIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 R++T EA ++GLID +GG + + S + + +Y+ N S + Sbjct: 209 RLFTAQEALRIGLIDKIGGLADAVADMARSLGLTSYSVVSIY----SYYGISPPNCSGLA 264 Query: 271 LLEDTIP--LMKQTKVQGLWAVW 291 + + +P L+ + + ++ ++ Sbjct: 265 MTQAKVPLGLLANSTLNPVFYIY 287 >gi|82701192|ref|YP_410758.1| peptidase S49 [Nitrosospira multiformis ATCC 25196] gi|82409257|gb|ABB73366.1| protein C, Serine peptidase, MEROPS family S49 [Nitrosospira multiformis ATCC 25196] Length = 321 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 18/242 (7%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIV 71 F S + VA I I G I D + + + + D S +++ Sbjct: 35 FPASQRKSVSQDGVAVIDITGPITPRASFLSLLFGGTDVETIQQDLSAALADSSVNKIVL 94 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++ SPGG + I ++ KP+ + V M ASA Y ++ A++ I ++T+LVGS Sbjct: 95 NIDSPGGVVSGVSPLADQIFSARSIKPIESFVSGMGASAAYWLAAATSHITISDTALVGS 154 Query: 132 IGVLFQYPYVKPFLDKLGVSI-KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 IGV+ K GV + V S+ K P P P+ +Q++Q +DS F Sbjct: 155 IGVVGTAIDDKARQQMQGVIFHQIVSSNAPKKRPDP---ATPEGLQVLQKEIDSLASVFT 211 Query: 191 RLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 V+ R + K G + G EA + GL D +G E S A+ K Sbjct: 212 AKVARYRGVNEMKVNSDFGQGGVLVGVEAVRAGLADAIGTFESTLVSSGAMPSAARATKK 271 Query: 250 KD 251 ++ Sbjct: 272 EE 273 >gi|220923762|ref|YP_002499064.1| peptidase S49 [Methylobacterium nodulans ORS 2060] gi|219948369|gb|ACL58761.1| peptidase S49 [Methylobacterium nodulans ORS 2060] Length = 300 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 18/215 (8%) Query: 38 VARIAIRGQI--------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAG 83 VA I + G I + L ++ A+++ + SPGGS Sbjct: 74 VAVIPVIGPIFPRANMLTEMSGTGTSAAMLARDLQLARDSAEVGAVMLLVDSPGGSPTGI 133 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 A+ + ++ RK V+ V AASA Y I+ ++ +V +T ++GSIGV+ Sbjct: 134 NALADQLYAMRGRKRVVAHVSGSAASAAYWIASSAGELVTEKTGMLGSIGVVAAISKQVE 193 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +SI+ V S+ P P ++ ++DS F+ V+ R + Sbjct: 194 PDASGSLSIEIVSSNAPNKRPDP---QTEDGAAEIRALLDSIEAQFIADVARGRKTTPAR 250 Query: 204 TLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 G + GA+A G+ D V + + L Sbjct: 251 VRTNFGAGGMKVGADAVAAGMADRVQTYDFTLRDL 285 >gi|149191855|ref|ZP_01870090.1| predicted inner membrane peptidase [Vibrio shilonii AK1] gi|148834290|gb|EDL51292.1| predicted inner membrane peptidase [Vibrio shilonii AK1] Length = 238 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 PH+ + G I+ + E + I ++RD ++V L S GG +A Sbjct: 101 SKREPHLFVLDFNGSIDAKEVASLREEVSAILAVARDGD--EVLVRLESGGGMVHAYGLA 158 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K K P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P L Sbjct: 159 SSQLDRIKAAKLPLTIAVDKVAASGGYMMACIADKIVSAPFAVVGSIGVIAQLPNFNKLL 218 Query: 146 DKLGVSIKSVKSSPMKAEPS 165 K + + + + K + Sbjct: 219 KKNDIEFEQLTAGEYKRTLT 238 >gi|27311191|ref|NP_758917.1| ORF24 [Vibrio phage VHML] gi|26891711|gb|AAN12323.1| ORF24 [Vibrio phage VHML] Length = 426 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 16/201 (7%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSS------PGGSAYAGEAIFRAIQKVKNRK-P 98 I + + + D + GG A + ++ K P Sbjct: 87 PITSYELIRHDYDTALNDPGVQ-----IDRHGDLTHGGGEAAGCYDLAPSLLSAPGVKRP 141 Query: 99 V--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +E SA Y ++C + + ++ GSIGV+ + K+G+SI V Sbjct: 142 VTRVSLENESCYSAAYALACCCDQVFLTSSAGAGSIGVICGRLDQTEYNRKMGLSIAVV- 200 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S KA+ SP ++ Q +Q ++ F LV+E+R + ++ L G +TG Sbjct: 201 SGDYKADFSPHKVLSDDERQRLQALIVQLGSEFHNLVAEARGMTAEQVKALKAG-CFTGR 259 Query: 217 EAKKVGLIDVVGGQEEVWQSL 237 A GL D V Q+E + L Sbjct: 260 XAVDNGLADGVMSQDEFYNYL 280 >gi|224535172|ref|ZP_03675711.1| hypothetical protein BACCELL_00033 [Bacteroides cellulosilyticus DSM 14838] gi|224523222|gb|EEF92327.1| hypothetical protein BACCELL_00033 [Bacteroides cellulosilyticus DSM 14838] Length = 292 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 97/221 (43%), Gaps = 10/221 (4%) Query: 35 SPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 V + G + + L + I + + +++ ++ PGG + + R I++ Sbjct: 75 ENSVVILTCDGVLYSWETYRLEQFIAKALANPKIAGIVLFVNGPGGMITRVDLLERMIRE 134 Query: 93 VKNRKPVITEVHEMAASAGYL-ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + KP+ + + ASA + +S V++ +GS G+++ Y K + ++LGV Sbjct: 135 --SSKPIAAYITGVCASAHFWFVSACGRKFVSSPMDEIGSCGIIYTYQSFKKYYEELGVE 192 Query: 152 IKSVK--SSPMKAEPSPFSEVNPKAVQ-MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +K + S+ +K + ++ K ++++ + ++ F + V+ + I YD+ L Sbjct: 193 LKDIYPDSADLKNKM--IRDMEEKQDDSLIKEKLSFYHNLFAQAVARNLGIKYDRNDPLF 250 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 G+ + A G +D G E+ + + + +I Sbjct: 251 RGQTYFADVALANGYVDAYGTLEDAIVWVLSQATLKRANEI 291 >gi|164662519|ref|XP_001732381.1| hypothetical protein MGL_0156 [Malassezia globosa CBS 7966] gi|159106284|gb|EDP45167.1| hypothetical protein MGL_0156 [Malassezia globosa CBS 7966] Length = 704 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 107/200 (53%), Gaps = 11/200 (5%) Query: 28 SSHVEDNSPHVARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + H +D + VA I ++G ++ E I +++ + + A+++ ++S GG Sbjct: 316 NEHADDPADKVAVIFLQGIMDRNSKSCSVSEAIHGLKQAAENKDIRAIVLRINSGGGEVI 375 Query: 82 AGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A EA++ AIQ V+ +KPV+ +AAS Y + A++ I A E+++ GSIGV F P Sbjct: 376 ASEALWAAIQHVRKSTQKPVVASFGSVAASGAYYAASAADAIFACESTMTGSIGVAFARP 435 Query: 140 YV-KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + +DK+ ++++++ + + A S +++ + V ++ VD Y F+ V + R Sbjct: 436 TILRELIDKVQLNVQTILAGSIGA--SVLHDLDDQHVSRLRTHVDEMYKDFLHKVMQGRG 493 Query: 199 IPYDKTLVLSDGRIWTGAEA 218 + D L+ GRI TG A Sbjct: 494 MSQDVLAGLAGGRIMTGLAA 513 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 83/222 (37%), Gaps = 35/222 (15%) Query: 47 IEDSQELIERIERISRDDSATALI------------VSLSSPGGSAYAGEAIFRAIQKVK 94 I + ++IE + R D ++ + P G A E + A+ + + Sbjct: 81 ILELHQVIETLRRAKDDARIRGIVADFSQMHVPRAVLR--QPLGLA-QTEELLTALHEFR 137 Query: 95 NRK--------PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 K P + S +L++ + + + V +G+ + + L Sbjct: 138 TAKQDQFGKDQPATVAWSDTFDSQTAFLLATGFDRVYMQSSGQVPLVGLGSSLTFFRRML 197 Query: 146 DKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 LGV + S + K+ S F E+ P+ + + DV+ H RL+ ++R Sbjct: 198 QWLGVRVLSETRNEYKSVTSAFVHDELPPEQLANLSDVLGGLQHNMARLLGQNR-FSEQG 256 Query: 204 TLVLSDGRI--------WTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ + ++ +EA GLID + + ++ SL Sbjct: 257 PPHVATAKAEHVLRHGPYSASEALAAGLIDGICHRHDITPSL 298 >gi|126729086|ref|ZP_01744900.1| probable bacteriophage-related protein [Sagittula stellata E-37] gi|126710076|gb|EBA09128.1| probable bacteriophage-related protein [Sagittula stellata E-37] Length = 340 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 1/173 (0%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 + S GG + I + KP+ A A Y + ++ I + VGSI Sbjct: 14 VKSGGGLVDGCFELNDKIYARRGEKPIRAFADSYAYIAAYATASVADSITVTRSGGVGSI 73 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV+ + LD GV++ ++S P KAE P+ ++ A MQ VD S+ FV L Sbjct: 74 GVIITHVEYSCALDTRGVTVTPIRSKPRKAESGPYQALSKAAQAKMQASVDFSHSEFVAL 133 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 V+ +R + +D + EA + GL D +G ++ + A D Sbjct: 134 VARNRGMSEADVDA-TDALTFLAHEAVENGLADQIGSTDDALAAFAASFNDPD 185 >gi|254521421|ref|ZP_05133476.1| peptidase S49 [Stenotrophomonas sp. SKA14] gi|219719012|gb|EED37537.1| peptidase S49 [Stenotrophomonas sp. SKA14] Length = 434 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 89/213 (41%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + I + G + + + + + + DD+ T++I+ L +PGG A Sbjct: 62 IGVINLSGAMVNRPMPGASGPGPVSYAAVRDTFDELLNDDAVTSIILRLDTPGGMASGCF 121 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + + RKP+ V + A SAG+ + A + I + T VGS+GV+ + Sbjct: 122 DLVDHIFEARGRKPLYALVDDHAYSAGFALGSACDEIWISRTGGVGSVGVVRFHQDWSGN 181 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 ++G+ + + + K + +P ++ +A ++ FV V+ + + + Sbjct: 182 NAQIGLKVTPLFAGARKVDFNPNFPLSEEAHAEAMADLEDMRTMFVDTVARNLGMEAEAV 241 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 ++ + G A VG +G ++ L Sbjct: 242 RA-TEAACYRGQAAVAVGFATRLGTWHDLIAHL 273 >gi|535530|gb|AAA57011.1| protease IV [Escherichia coli] Length = 324 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 201 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 260 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 261 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 320 Query: 130 GSIG 133 GSIG Sbjct: 321 GSIG 324 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 17/207 (8%) Query: 63 DDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 D + T +++ L + GG + + I +A+++ ++ KPV + Y ++ +N Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYS-QGQYYLASFANK 59 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMM 178 I + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 60 IWLSPQGVVDLHGFATNSLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREAD 119 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAKKVGLIDVVGGQ 230 + + ++ V+ +R IP + + G + T A + L+D + Sbjct: 120 SRWIGELWQNYLNTVAANRQIPAHQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 179 Query: 231 EEVWQSLYAL----GVDQSIRKIKDWN 253 E+ ++L D++ R I ++ Sbjct: 180 AEIEKALTKEFGWSKTDKNYRAISYYD 206 >gi|535532|gb|AAA57012.1| protease IV [Escherichia coli] gi|535538|gb|AAA57015.1| protease IV [Escherichia coli] gi|535540|gb|AAA57016.1| protease IV [Escherichia coli] gi|535568|gb|AAA57030.1| protease IV [Escherichia coli] Length = 324 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 201 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 260 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 261 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 320 Query: 130 GSIG 133 GSIG Sbjct: 321 GSIG 324 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 17/207 (8%) Query: 63 DDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 D + T +++ L + GG + + I +A+++ ++ KPV + Y ++ +N Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYS-QGQYYLASFANK 59 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMM 178 I + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 60 IWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREAD 119 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAKKVGLIDVVGGQ 230 + + ++ V+ +R IP + + G + T A + L+D + Sbjct: 120 SRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 179 Query: 231 EEVWQSLYAL----GVDQSIRKIKDWN 253 E+ ++L D++ R I ++ Sbjct: 180 AEIEKTLTKEFGWSKTDKNYRAISYYD 206 >gi|535534|gb|AAA57013.1| protease IV [Escherichia coli] Length = 324 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 201 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 260 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 261 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 320 Query: 130 GSIG 133 GSIG Sbjct: 321 GSIG 324 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 17/207 (8%) Query: 63 DDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 D + T +++ L + GG + + I +A+++ ++ KPV + Y ++ +N Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYS-QGQYYLASFANK 59 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMM 178 I + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 60 IWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREAD 119 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAKKVGLIDVVGGQ 230 + + ++ V+ +R IP + + G + T A + L+D + Sbjct: 120 SRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 179 Query: 231 EEVWQSLYAL----GVDQSIRKIKDWN 253 E+ ++L D++ R I ++ Sbjct: 180 AEIEKTLTKEFGWSKTDKNYRAISYYD 206 >gi|535536|gb|AAA57014.1| protease IV [Escherichia coli] Length = 324 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 201 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 260 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 261 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 320 Query: 130 GSIG 133 GSIG Sbjct: 321 GSIG 324 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 17/207 (8%) Query: 63 DDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 D + T +++ L + GG + + I +A+++ ++ KPV + Y ++ +N Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAIGENYS-QGQYYLASFANK 59 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMM 178 I + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 60 IWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREAD 119 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAKKVGLIDVVGGQ 230 + + ++ V+ +R IP + + G + T A + L+D + Sbjct: 120 SRWIGELWQNYLNTVAANRQIPAKQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 179 Query: 231 EEVWQSLYAL----GVDQSIRKIKDWN 253 E+ ++L D++ R I ++ Sbjct: 180 AEIEKTLTKEFGWSKTDKNYRAISYYD 206 >gi|535570|gb|AAA57031.1| protease IV [Escherichia coli] Length = 324 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 201 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 260 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 261 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 320 Query: 130 GSIG 133 GSIG Sbjct: 321 GSIG 324 Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 17/207 (8%) Query: 63 DDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 D + T +++ L + GG + + I +A+++ ++ KPV + Y ++ +N Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYS-QGQYYLASFANK 59 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMM 178 I + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 60 IWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREAD 119 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAKKVGLIDVVGGQ 230 + + ++ V+ +R IP + + G + T A + L+D + Sbjct: 120 SRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 179 Query: 231 EEVWQSLYAL----GVDQSIRKIKDWN 253 E+ ++L D++ R I ++ Sbjct: 180 AEIEKALTKEFGWSKTDKNYRAISYYD 206 >gi|535524|gb|AAA57008.1| protease IV [Escherichia coli] gi|535526|gb|AAA57009.1| protease IV [Escherichia coli] gi|535528|gb|AAA57010.1| protease IV [Escherichia coli] gi|535542|gb|AAA57017.1| protease IV [Escherichia coli] Length = 324 Score = 132 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ ++ D + + G I D +E +I D A++ Sbjct: 201 AISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIV 260 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + ++SPGG+ A E I + + KPV+ + MAAS GY IS +N IVA ++L Sbjct: 261 LRVNSPGGTVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLT 320 Query: 130 GSIG 133 GSIG Sbjct: 321 GSIG 324 Score = 86.0 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 17/207 (8%) Query: 63 DDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNI 120 D + T +++ L + GG + + I +A+++ ++ KPV + Y ++ +N Sbjct: 1 DRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYS-QGQYYLASFANK 59 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMM 178 I + +V G Y K LDKL VS + K+ PF +++P A + Sbjct: 60 IWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREAD 119 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW--------TGAEAKKVGLIDVVGGQ 230 + + ++ V+ +R IP ++ + G + T A + L+D + Sbjct: 120 SRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 179 Query: 231 EEVWQSLYAL----GVDQSIRKIKDWN 253 E+ ++L D++ R I ++ Sbjct: 180 AEIEKALTKEFGWSKTDKNYRAISYYD 206 >gi|296536846|ref|ZP_06898893.1| serine peptidase [Roseomonas cervicalis ATCC 49957] gi|296262817|gb|EFH09395.1| serine peptidase [Roseomonas cervicalis ATCC 49957] Length = 294 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 16/217 (7%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + + + D A A+++ L+S GG Sbjct: 74 VAVIQVEGMLVQKTGTLRPYSGMTGYDGIRQNLLTALADTQAEAIVLDLNSGGGEVSGCF 133 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + + KP+ + A SA Y ++ A + + T VGS+GV+ Sbjct: 134 DLADTITQARGIKPIWGICGDCAYSAAYALASACDRVTVPRTGGVGSVGVITMMVDYSKA 193 Query: 145 LDKLGVSIKSVKSSPMKAEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G+++ V KAE + ++ + P+ +Q +Q V FV LV+++R + D Sbjct: 194 ITDEGLAVHFVHYGARKAEETRQMYTGIKPELLQRVQQDVTMMGDIFVNLVAQNRRMSAD 253 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 + + G GL D V +E +++L A Sbjct: 254 AVKA-QEADYFLGERGVAAGLADAVMAPDEAFRALLA 289 >gi|221369846|ref|YP_002520942.1| Protein C. Serine peptidase. MEROPS family S49 [Rhodobacter sphaeroides KD131] gi|221162898|gb|ACM03869.1| Protein C. Serine peptidase. MEROPS family S49 [Rhodobacter sphaeroides KD131] Length = 447 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + L+ +I D S + + + S GG Sbjct: 86 VAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQITAAVADPSVRGIALEIDSYGGEVAGLF 145 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + AI+ + KPV V E A SA Y I+ + IV T VGSIGVL + Sbjct: 146 DLADAIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQA 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV++ + + K + +P+ + +Q V++S F V+ R + Sbjct: 206 MADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRALFAETVAAGRGARLSRQ 265 Query: 205 LVLSD 209 L+ Sbjct: 266 QALAT 270 >gi|238756367|ref|ZP_04617679.1| Protein C serine peptidase MEROPS family S49 [Yersinia ruckeri ATCC 29473] gi|238705428|gb|EEP97833.1| Protein C serine peptidase MEROPS family S49 [Yersinia ruckeri ATCC 29473] Length = 280 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I I+G + + R D + + + + SPGG Sbjct: 62 IAIIPIQGTLVQKLGSLRPYSGMTGYDGIRACFLRALYDKTVKGICLDIDSPGGEVAGCF 121 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + +KP+ + E A SA Y ++ A++ IV T VGS+GV+ + Sbjct: 122 DLVDEIYASRGQKPIWAILSENAYSAAYALASAADRIVVPRTGGVGSVGVIVMHVDWSQR 181 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + G+ + + KAE +P++ ++ +A Q +Q VD FV V+ +R I +K Sbjct: 182 IKADGLQVTIITYGDRKAESNPYTPLSEEAQQSIQSDVDEMGRLFVSTVARNRGI-AEKI 240 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + A+ ++GL D V + +++L Sbjct: 241 IRDTQAACLLAADGVQLGLADEVAAPDTAFRAL 273 >gi|330994906|ref|ZP_08318828.1| Head-tail preconnector protein GP5 [Gluconacetobacter sp. SXCC-1] gi|329758167|gb|EGG74689.1| Head-tail preconnector protein GP5 [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 14/213 (6%) Query: 38 VARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + ++ ++ + S A ++ + SPGG+ Sbjct: 59 VAIIPVSGVLLPGESPGWWWSGATFYEDINVAFQQAIDEPSIKATVLLVDSPGGTVAGCF 118 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I + + KP++ V+E A SA Y ++ +++ I+ T VGSIGV+ + + Sbjct: 119 DLADRIYEGRGAKPIVAIVNESAYSAAYALASSADTIIVPRTGGVGSIGVVGMHVDITGA 178 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 L++ G+ + + + K + P + ++ +A + Q +D+ FV V+ +R+IP D+ Sbjct: 179 LEQAGIKVTTFQFGDQKTDSYPTTTMSEEAAKRFQADIDAMGELFVATVARNRDIPADRV 238 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + + G GL D V G E ++ L Sbjct: 239 RA-TQAGTFLGQRGIDAGLADAVMGAEAAFREL 270 >gi|77465783|ref|YP_355286.1| serine peptidase [Rhodobacter sphaeroides 2.4.1] gi|77390201|gb|ABA81385.1| protein C. Serine peptidase. MEROPS family S49 [Rhodobacter sphaeroides 2.4.1] Length = 448 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + L+ +I D S + + + S GG Sbjct: 86 VAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQISAAVADPSVRGIALEIDSYGGEVAGLF 145 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + AI+ + KPV V E A SA Y I+ + IV T VGSIGVL + Sbjct: 146 DLADAIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQA 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV++ + + K + +P+ + +Q V++S F V+ R + Sbjct: 206 MADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRALFAETVAAGRGARLSRQ 265 Query: 205 LVLSD 209 L+ Sbjct: 266 QALAT 270 >gi|283786268|ref|YP_003366133.1| hypothetical protein ROD_25981 [Citrobacter rodentium ICC168] gi|282949722|emb|CBG89341.1| hypothetical prophage protein [Citrobacter rodentium ICC168] Length = 288 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 14/221 (6%) Query: 33 DNSPHVARIAIRGQIEDS-------------QELIERIERISRDDSATALIVSLSSPGGS 79 DN +A I I+G + + + D T + + + SPGG Sbjct: 66 DNVAGIAVIPIQGTLVQKLGCLRPYSGMTGYDGIRQTFLTAMADPEITGICLDIDSPGGE 125 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + I + KP+ + E A SA Y I+ A++ I T VGS+GV+ + Sbjct: 126 VAGCFDLVDEIYSARGDKPIHAILSESAYSAAYAIASAADRICVPRTGGVGSVGVVTMHL 185 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G+ + + KAE SP+ E++ +A +Q +++ FV V+ +R I Sbjct: 186 DWSQRIMDDGLKVTIITFGSRKAEGSPYKELSDEAFTAIQQDINAMGELFVNTVARNRGI 245 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 K + + + + ++GL D V + ++ L +L Sbjct: 246 S-AKVIKNTQAACFMAGDGVELGLADEVITPDAAFRKLLSL 285 >gi|320326645|gb|EFW82694.1| hypothetical phage-related protein [Pseudomonas syringae pv. glycinea str. B076] Length = 410 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 19/228 (8%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++ + F +++ I G +Q L ++ D S ++I+++ Sbjct: 56 VAIIPVVGPVFRYANLFT---------EISGA-TSTQVLATDLQSALDDPSIKSIILNID 105 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L+GSI Sbjct: 106 SPGGVAAGINELADQIHAGRARKRIVAYVGGTGASAAYWLASAASEIVIDETALLGSI-- 163 Query: 135 LFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V G + S +P K + + + VD+ FV Sbjct: 164 GVVVEAVVEGEASSGRKRYQIVSRNAPNKR----LDMATEEGRAKVGETVDAMGEVFVAK 219 Query: 193 VSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ + + D + D G + GA A + GL +G E + L Sbjct: 220 VARNLGVASDDVPAMGDFGGLRVGAAAVESGLAHRLGSLEGLITELAK 267 >gi|77465636|ref|YP_355139.1| serine peptidase [Rhodobacter sphaeroides 2.4.1] gi|77390054|gb|ABA81238.1| protein C. Serine peptidase. MEROPS family S49 [Rhodobacter sphaeroides 2.4.1] Length = 448 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + L+ +I D S + + + S GG Sbjct: 86 VAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQITAAVADPSVRGIALEIDSYGGEVAGLF 145 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + I+ + KPV V E A SA Y I+ + IV T VGSIGVL + Sbjct: 146 DLADTIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQA 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV++ + + K + +P+ + +Q V++S F V+ R + Sbjct: 206 MADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRGLFAETVAAGRGARLTRQ 265 Query: 205 LVLSD 209 L+ Sbjct: 266 QALAT 270 >gi|260910201|ref|ZP_05916878.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635705|gb|EEX53718.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 330 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 10/206 (4%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S++L+ + + T + ++SPGG A+ + + ++ KP+IT + Sbjct: 119 SSKQLVADLMAAEANPQITCHFLHVNSPGGDAWFLDRLDETLRAC--TKPIITLYEHLCC 176 Query: 109 SAGYLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SPMKA-EP 164 SAGY I+C N + A VG IG + + +P+ +KLG+ + K+ S +K Sbjct: 177 SAGYYIACHGNRVYALTANDYVGCIGTMCSFYDFQPYFEKLGIKLIEAKADKSDLKNKTF 236 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD--KTLVLSDGRIWTGAEAKKVG 222 + P+ Q + D ++ F+ V R+ + + G + AEA G Sbjct: 237 DDLRQGKPE--QYVDDFLNPLNEQFLACVRSMRSGLAELGDDAPVLRGETYLTAEAVTTG 294 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRK 248 L D E +G + + + Sbjct: 295 LCDGTRTFAEAVAEAVVMGAEYTEAE 320 >gi|330946658|gb|EGH47631.1| putative inner membrane peptidase [Pseudomonas syringae pv. pisi str. 1704B] Length = 165 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 2/124 (1%) Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 N I++A +++GSIGV+ Q P V L K + + + + K + F E K + Sbjct: 2 GNKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREK 61 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 Q +D ++ F V+ R P ++ G +W G A L+D + +E Sbjct: 62 FQQDLDITHDLFKNFVASYR--PQLSIDEVATGEVWLGMAAVDKLLVDELKTSDEYLAER 119 Query: 238 YALG 241 Sbjct: 120 AKDA 123 >gi|145516697|ref|XP_001444237.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411648|emb|CAK76840.1| unnamed protein product [Paramecium tetraurelia] Length = 241 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 15/226 (6%) Query: 35 SPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 P + + I I+ +S +L+E E + AL V ++S GG GE + + I+ Sbjct: 7 KPTIPILRINSGIDHNSAKLVE--ESLKPLTRMKALAVVVNSTGGLLVQGELMKKKIELF 64 Query: 94 KN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + P+ T + A SAGY + N I E S+VGSIGVL+ + KLG Sbjct: 65 AKTHKIPLYTFAEDSALSAGYYLLSIGNKIFVDEASMVGSIGVLYLNLSIDKLTRKLGFE 124 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS----SYHWFVRLVSESR----NIPYDK 203 + S+ K + +N + + M+ +V F + R D Sbjct: 125 PRKFSSNK-KLFLNITG-LNDERDEEMEGIVKDQFGIMRQQFFDHCDKYRPQLQKQDADV 182 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 ++ + I+TG EA K GL D +G EEV L+ + I +I Sbjct: 183 KDLIYNANIFTGIEAVKYGLADEIGNFEEVLNRLHPDCQLRDITRI 228 >gi|332560534|ref|ZP_08414852.1| Protein C, Serine peptidase, MEROPS family S49 [Rhodobacter sphaeroides WS8N] gi|332274332|gb|EGJ19648.1| Protein C, Serine peptidase, MEROPS family S49 [Rhodobacter sphaeroides WS8N] Length = 448 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + L+ +I D S + + + S GG Sbjct: 86 VAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQITAAVADPSVHGIALEIDSYGGEVAGLF 145 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + AI+ + KPV V E A SA Y I+ + IV T VGSIGVL + Sbjct: 146 DLADAIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQA 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV++ + + K + +P+ + +Q V++S F V+ R + Sbjct: 206 MADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRGLFAETVAAGRGARLSRQ 265 Query: 205 LVLSD 209 L+ Sbjct: 266 QALAT 270 >gi|126464115|ref|YP_001045228.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17029] gi|126105926|gb|ABN78456.1| protein C. Serine peptidase. MEROPS family S49 [Rhodobacter sphaeroides ATCC 17029] Length = 451 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA I + G + + L+ +I D S + + + S GG Sbjct: 86 VAVIEVTGTLVHRGGWIGQSSGTTSYEGLMAQITAAVADTSVRGIALEIDSYGGEVAGLF 145 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 + AI+ + KPV V E A SA Y I+ + IV T VGSIGVL + Sbjct: 146 DLADAIRAARAVKPVRAFVAEAALSAAYAIASQAERIVLPRTGAVGSIGVLLVHADFSQA 205 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + GV++ + + K + +P+ + +Q V++S F V+ R + Sbjct: 206 MADRGVAVTLIHAGRHKVDGNPYEALPEGVRADLQARVEASRALFAETVAAGRGARLSRQ 265 Query: 205 LVLSD 209 L+ Sbjct: 266 QALAT 270 >gi|301385640|ref|ZP_07234058.1| hypothetical phage-related protein [Pseudomonas syringae pv. tomato Max13] Length = 410 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 19/228 (8%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++ + F +++ I G +Q L ++ D + ++I+++ Sbjct: 56 VAIIPVVGPVFRYANLFT---------EISGA-TSTQVLATDLQSALDDPNIKSIILNID 105 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L+GSI Sbjct: 106 SPGGVAAGINELADQIHAGRARKSIVAYVGGTGASAAYWLASAASEIVIDETALLGSI-- 163 Query: 135 LFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V G + S +P K + + + VD+ FV Sbjct: 164 GVVVEAVVEGEASSGRKRYQIVSRNAPNKR----LDMATEEGRAKVGETVDAMGEVFVAK 219 Query: 193 VSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ + + D + D G + GA A + GL +G E + L Sbjct: 220 VARNLGVASDAVPAMGDFGGLRVGAAAVESGLAHRLGSLEGLITELAK 267 >gi|302061402|ref|ZP_07252943.1| hypothetical phage-related protein [Pseudomonas syringae pv. tomato K40] Length = 410 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 19/228 (8%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++ + F +++ I G +Q L ++ D + ++I+++ Sbjct: 56 VAIIPVVGPVFRYANLFT---------EISGA-TSTQVLATDLQSALDDPNIKSIILNID 105 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L+GSI Sbjct: 106 SPGGVAAGINELADQIHAGRARKSIVAYVGGTGASAAYWLASAASEIVIDETALLGSI-- 163 Query: 135 LFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V G + S +P K + + + VD+ FV Sbjct: 164 GVVVEAVVEGEASSGRKRYQIVSRNAPNKR----LDMATEEGRAKVGETVDAMGEVFVAK 219 Query: 193 VSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ + + D + D G + GA A + GL +G E + L Sbjct: 220 VARNLGVASDAVPAMGDFGGLRVGAAAVESGLAHRLGSLEGLITELAK 267 >gi|55379667|ref|YP_137517.1| proteinase IV-like [Haloarcula marismortui ATCC 43049] gi|55232392|gb|AAV47811.1| proteinase IV-like [Haloarcula marismortui ATCC 43049] Length = 308 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 18/221 (8%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSAT 67 T +++++ V +S E + +VA + I I S Q+ ++++ + ++S Sbjct: 17 TVLAVIAILIGAAVVPYAASVAEGDEQYVAVVNIDETISSSSSQDTVQKLRELRSNESVE 76 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ +SSPGGSA + E+++ A++++ KPV T V + AAS Y + S+ I S Sbjct: 77 AVVLRISSPGGSAASSESMYLAVKRLSAEKPVYTSVDQYAASGAYYTAVPSDRIYVTPAS 136 Query: 128 LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 LVG +GV+ P G+S + + P KA + ++S Sbjct: 137 LVGHVGVIGTAPS-------DGLSP-AATTGPDKA----HRGMT---RDQYYASLESMKR 181 Query: 188 WFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVV 227 FV V R + + +++ + G A + G D V Sbjct: 182 AFVGAVMAERGDRLNVSRETVAEASAYQGGRAVQTGYADEV 222 >gi|99081464|ref|YP_613618.1| serine peptidase [Ruegeria sp. TM1040] gi|99037744|gb|ABF64356.1| protein C. Serine peptidase. MEROPS family S49 [Ruegeria sp. TM1040] Length = 315 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 79/222 (35%), Gaps = 16/222 (7%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSS 75 ++V + F +S + +S + + I ++V + S Sbjct: 79 AVVPMFGPIFPRASMINASSDGTSL----------NAFMRDIRVAQASTDVHRIVVVVDS 128 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 PGG ++ KP+ V ASA Y + IV ++ VGSIGV+ Sbjct: 129 PGGVVSGLGEASETLRA--TTKPITAFVTGNCASAAYWLCSQFGEIVMDRSAAVGSIGVV 186 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + ++ S + V S+ P P + +Q +D+ F+ V+ Sbjct: 187 ASLSRQEAADNQGRRSYEIVSSNAPNKRPDPS---TEEGRTAIQKDIDAIEEVFIADVAA 243 Query: 196 SRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 R + D+ G + + A + G+ D +G E V Sbjct: 244 GRRVSADRVRSDFGRGAMLSATRAIEAGMADRIGTLEGVLTE 285 >gi|213971971|ref|ZP_03400069.1| bacteriophage-related protein [Pseudomonas syringae pv. tomato T1] gi|213923286|gb|EEB56883.1| bacteriophage-related protein [Pseudomonas syringae pv. tomato T1] Length = 381 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 19/228 (8%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++ + F +++ I G +Q L ++ D + ++I+++ Sbjct: 27 VAIIPVVGPVFRYANLFT---------EISGA-TSTQVLATDLQSALDDPNIKSIILNID 76 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L+GSI Sbjct: 77 SPGGVAAGINELADQIHAGRARKSIVAYVGGTGASAAYWLASAASEIVIDETALLGSI-- 134 Query: 135 LFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V G + S +P K + + + VD+ FV Sbjct: 135 GVVVEAVVEGEASSGRKRYQIVSRNAPNKR----LDMATEEGRAKVGETVDAMGEVFVAK 190 Query: 193 VSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ + + D + D G + GA A + GL +G E + L Sbjct: 191 VARNLGVASDAVPAMGDFGGLRVGAAAVESGLAHRLGSLEGLITELAK 238 >gi|330970624|gb|EGH70690.1| peptidase S49 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 410 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 19/228 (8%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLS 74 ++++ + F +++ I G +Q L ++ D S ++I+++ Sbjct: 56 VAIIPVVGPVFRYANLFT---------EISGA-TSTQVLATDLQSALDDPSIKSIILNID 105 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 SPGG A + I + RK ++ V ASA Y ++ A++ IV ET+L+GSI Sbjct: 106 SPGGVAAGINELADQIHAGRARKRIVAYVGGTGASAAYWLASAASEIVIDETALLGSI-- 163 Query: 135 LFQYPYVKPFLDKLGVSIKSVKS--SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 V G + S +P K + + + VD+ FV Sbjct: 164 GVVVEAVVEGEASSGRKRYQIVSRNAPNKR----LDMATEEGRAKVGETVDAMGEVFVAK 219 Query: 193 VSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 V+ + + D + D G + G A + GL +G E + L Sbjct: 220 VARNLGVASDAVPAMGDFGGLRVGVAAVESGLAHRLGSLEGLITELAK 267 >gi|126732642|ref|ZP_01748439.1| Peptidase S49 [Sagittula stellata E-37] gi|126706926|gb|EBA05995.1| Peptidase S49 [Sagittula stellata E-37] Length = 323 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 74/208 (35%), Gaps = 19/208 (9%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 A + + G I ++ + +S +++ + SPGG Sbjct: 81 TAVVPVFGTIFPRASMLGASTGGTALSSIMADMRVAWATESVERIVMLVDSPGGVVSGLG 140 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 A++ + KP+ V + ASA Y ++ + IV +++VGSIGVL + Sbjct: 141 EAAEALR--ASPKPITAFVTGIGASAAYWLASQAQEIVLDRSAMVGSIGVLATTSRQEGP 198 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 S + S P P + +Q VD+ FV V+ R + Sbjct: 199 DASGRRSYEITSSGAPLKRPDPS---TDEGRAAIQRDVDALEAVFVADVAAGRRVKASTV 255 Query: 205 L-VLSDGRIWTGAEAKKVGLIDVVGGQE 231 G + EA G+ D VG E Sbjct: 256 RSEFGRGAMVVAEEAVAAGMADRVGTLE 283 >gi|146277791|ref|YP_001167950.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145556032|gb|ABP70645.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 314 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 79/222 (35%), Gaps = 19/222 (8%) Query: 28 SSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLS 74 + + VA + + G I ++ + D + +++ Sbjct: 68 GARMSTVRDGVAVVPVFGPIFPRANMINSSAGGTSLDAIMRDMRVALADGNVERIVMVFD 127 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 +PGG I+ KP+ V +AASAGY ++ + +V + VGSIGV Sbjct: 128 TPGGVVSGLGEAAEGIRGAS--KPITGFVTGIAASAGYWLASQAAELVVERAASVGSIGV 185 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + S + V S + P P + +Q+ VD+ FV V+ Sbjct: 186 VASTSRQEGPGADGRRSYEIVSSGAPRKRPDPS---TDEGRAAIQEEVDAIEAVFVGDVA 242 Query: 195 ESRNIPYDKTL-VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + R L G + A G+ D +G E V + Sbjct: 243 KGRKTTATTVLSSFGRGAMVPAGAAIDAGMADRIGTLESVLR 284 >gi|302382492|ref|YP_003818315.1| peptidase S49 [Brevundimonas subvibrioides ATCC 15264] gi|302193120|gb|ADL00692.1| peptidase S49 [Brevundimonas subvibrioides ATCC 15264] Length = 520 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 15/200 (7%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAY----AGEAIFRAIQKVKNRKPVITEVHEM 106 L+ + D + + L +PGG A R ++ KP+ +M Sbjct: 127 DTLLIAMREAMADARVRGIFLRLDTPGGVVGGGLPALAQFMREARESAGGKPIWVYA-DM 185 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--SPMKAEP 164 A SAGY I+ ++ I+A VGSIG + + L++ GV+I S++ +K E Sbjct: 186 ACSAGYWIAAQADRILAPSVGYVGSIGAVMVHEDWSGALEQDGVAITSIEFPDGGVKTEG 245 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGA------E 217 + + ++ +Q ++ F+ V+ R + + L + + Sbjct: 246 AWWKALSEGGRTALQSDINQVGEMFLADVAAGRPGLDREAMLAM-RADAFMAEHTDPARS 304 Query: 218 AKKVGLIDVVGGQEEVWQSL 237 +GL D + +E + +L Sbjct: 305 GVTLGLADEIATEEAAFAAL 324 >gi|187735829|ref|YP_001877941.1| peptidase S49 [Akkermansia muciniphila ATCC BAA-835] gi|187425881|gb|ACD05160.1| peptidase S49 [Akkermansia muciniphila ATCC BAA-835] Length = 247 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 31/229 (13%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR 62 F+ + K R + SLV + V+ + V N + G + Q +++ I+ + Sbjct: 36 FIQTRQKARVIGSSLV-IDVIGPLYGDGVPLNE------VLGGT--NYQSIVKEIKGAA- 85 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNI 120 + ++ SPGG I+ + PV + V M SA Y ++ A + Sbjct: 86 -GNIDEVVFIFDSPGGDVQGCHETAELIKSL----PVETVAYVKGMCCSAAYYLASACDQ 140 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK-SSPMKAEPSPFSEVNPKAVQMMQ 179 +V ET+LVGSIG + K S + + ++ P + +N +A+ + Sbjct: 141 VVVTETALVGSIGTVISLWNAK--------SEEILTITNDDAVFKHPETPMNTEAIAYYR 192 Query: 180 DVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 D+ + F V+ R + D G+++ +A +GLID V Sbjct: 193 DLCNKIAGRFQEFVASGRPGLSADA----FSGKVFVAEDAVSLGLIDDV 237 >gi|167761710|ref|ZP_02433837.1| hypothetical protein BACSTE_00044 [Bacteroides stercoris ATCC 43183] gi|167700436|gb|EDS17015.1| hypothetical protein BACSTE_00044 [Bacteroides stercoris ATCC 43183] Length = 305 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 12/239 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQI--------EDSQELIERIERISRDDSATALIVSLSSPGG 78 +S + A I + G + + E I + + ++++ + S GG Sbjct: 66 GNSFSDAPQGSTAIIPVHGTMLKYGTYCSYGTTEYAALIRDAADSANISSVLCDIDSGGG 125 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET--SLVGSIGVLF 136 + A + AI K++ + ++ ASA Y + + I+A+ T + GSIGV+ Sbjct: 126 AVDAIAPLVDAILYAKSKGKAVVAHCDLCASAAYYAASYCDEIIASNTISAEFGSIGVMM 185 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSE 195 +P + + GV + ++ S+ + +PF ++ + +D F V + Sbjct: 186 SFPDYAKYYENAGVKVHTIYSNLSDYKNAPFEAAKKGDYASIRDEELDPLARDFQANVRK 245 Query: 196 SRNI-PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 +R +T L GR++ +A KVGLID +G Q+ + + + +I + Sbjct: 246 NRGECLKQETEGLLRGRMFYAEDALKVGLIDSIGNQDYAVRRSREINAEMTINNYINSK 304 >gi|225709548|gb|ACO10620.1| Probable protease sohB [Caligus rogercresseyi] Length = 131 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 1/116 (0%) Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A S GY + CA + I + SL+GSIG + ++ F+ + + + + + K+ P Sbjct: 15 ALSGGYWLLCAGDEIYINQCSLIGSIGAIMASFGLEKFIKRHDIERRVLTAGKNKSIMDP 74 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY-DKTLVLSDGRIWTGAEAKKV 221 F E+ + ++ + F V +SR L +G W G A + Sbjct: 75 FVEMTEAERLRLSAILSDIHEPFKEHVRKSRGNKLIKDEDKLFNGEFWCGQAAVNL 130 >gi|319411923|emb|CBQ73966.1| related to Signal peptide peptidase [Sporisorium reilianum] Length = 939 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 11/196 (5%) Query: 32 EDNSPHVARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +D V + + G I + +++ ++ + + ++++ + S GG + E+ Sbjct: 373 DDEVVQVGVVYLLGGISSAPGEFSTSSVLKGLKEAAEHEDIKSIVLRIDSGGGDVVSSES 432 Query: 86 IFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I+ A+++V+ KPV+ AAS GY + A++ I+A E ++ GSIGV P + Sbjct: 433 IWDAVRRVREDYGKPVVASFGNAAASGGYYAASAADAILACENTVTGSIGVASLRPTITR 492 Query: 144 -FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 F D+ + I+S + S +++ +D Y F++ V + R+I D Sbjct: 493 AFFDRFNIGIQSFFTGS--TSQSTLHDLDEAQRAKSAKHIDEMYGDFLQKVCDGRSISRD 550 Query: 203 KTLVLSDGRIWTGAEA 218 L+ GR+ TG A Sbjct: 551 IIESLAGGRVMTGLSA 566 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 79/219 (36%), Gaps = 39/219 (17%) Query: 52 ELIERIERISRDDSATALI-----VSLSSPGGSAY-------AGEAIFRAIQKVKNRK-- 97 E+I ++ D+ + + L S S E + +AI + K K Sbjct: 128 EVIRALKWAQADERIKGIFADFSGLHLPS---SVTPNRLGLAQIEELMQAIHEFKLAKKQ 184 Query: 98 -------PVITEVHEMAASAGYLISCASNIIVAAETSLVGSI---GVLFQYPYVKPFLDK 147 P I + +L++ A + + GS+ G+ Q P+ K LD Sbjct: 185 QHGESARPSIAWADTFNSQGSFLLASAFDELWMQPA---GSVPLTGLGAQIPFFKKVLDY 241 Query: 148 LGVSIKSVKSSPMKAEPSPFS---EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-- 202 G+ + + K+ S FS + +Q +++ V V+ +R D Sbjct: 242 FGIRVLAEARREYKSMISTFSREDSLPAPQIQNEAELLGELNRGLVHAVAVNRYPDQDPD 301 Query: 203 ----KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 K ++ EAK++GLI+ + ++ + L Sbjct: 302 VVSRKVEAWMKDGPFSTREAKELGLINGAAFKRDIIKRL 340 >gi|99034762|ref|ZP_01314688.1| hypothetical protein Wendoof_01000499 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 199 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 13/168 (7%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 E+N +A I + G + +++ E IE+ D+ +I+ + SPG Sbjct: 32 AENNVEKIAIIPVHGILTKKPGAFDDMLGMTSYEKIREEIEKALIDEEVETIILDIDSPG 91 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + I + + K ++ ++ A SA Y I+ ++ ++ TS VGSIGV+ Sbjct: 92 GEVNGLFDLSDFIYEARGLKKIVAIANDDAYSAAYAIASSAEKVLVTRTSGVGSIGVIAS 151 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + F +K G+ +V + K + +P + ++V+ +QD VD Sbjct: 152 HIDQSGFDEKQGIKYTTVFAGKRKNDLNPHEPITSESVESLQDEVDRL 199 >gi|323187659|gb|EFZ72962.1| head-tail preconnector protein GP5 domain protein [Escherichia coli RN587/1] Length = 169 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 13/122 (10%) Query: 38 VARIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + ++ +++ D +++ + SPGG Sbjct: 44 IAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVRGVLLDIDSPGGQVAGAF 103 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I +++ +KPV ++ A SA L++ A + + +TS +GSIGV+ + Sbjct: 104 DCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTSRIGSIGVMMSHVSYAGH 163 Query: 145 LD 146 L Sbjct: 164 LA 165 >gi|224135353|ref|XP_002322052.1| predicted protein [Populus trichocarpa] gi|222869048|gb|EEF06179.1| predicted protein [Populus trichocarpa] Length = 212 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 1/137 (0%) Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-SEVNP 172 ++ A++ IVA +L GSIGV+ + +K+G + + + + + P Sbjct: 1 MAMAADTIVAENLTLTGSIGVVTGKFSLGKLYEKIGFNKEIISRGKYAELLAADQRPLRP 60 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 ++ ++Y F + SR++P DK ++ GR+WTG +A GL+D +GG Sbjct: 61 DEAELFAKSAQNAYEQFRDKAAFSRSMPVDKMEEVAQGRVWTGQDAASRGLVDAIGGFSR 120 Query: 233 VWQSLYALGVDQSIRKI 249 R++ Sbjct: 121 AVAIAKQKANIPQDRQV 137 >gi|237800698|ref|ZP_04589159.1| putative inner membrane peptidase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023557|gb|EGI03614.1| putative inner membrane peptidase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 218 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 8/134 (5%) Query: 32 EDNSPHVARIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V + G I+ S I + ++ D +++ L S GG ++ Sbjct: 87 AETKARVYVLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLA 144 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + +++ P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L Sbjct: 145 SSQLARIRQAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLL 204 Query: 146 DKLGVSIKSVKSSP 159 K + + + + Sbjct: 205 KKHDIDFEVLTAGE 218 >gi|313157920|gb|EFR57326.1| peptidase, S49 (protease IV) family protein [Alistipes sp. HGB5] Length = 190 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 5/165 (3%) Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLD-KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 IVA + +L GSIGV + L KLG++I V+S+ + + + P M+ Sbjct: 2 IVADKLTLTGSIGVFGMILDTREALKNKLGITIDGVQSNASSSFLA-TQPLTPVQRSMIM 60 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ---S 236 VD Y F V+E RN+P +K L ++ GR+W+GA+A +GLID GG + Sbjct: 61 RGVDKVYTTFTNDVAEGRNLPIEKVLDIAGGRVWSGADALGIGLIDTYGGLKTAIALAVD 120 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 LG + + ++ + + L + + LM + Sbjct: 121 KADLGDNYRVTEVTETPTGFAAFIASLNMSVREAFTRSELGLMMK 165 >gi|323454680|gb|EGB10550.1| hypothetical protein AURANDRAFT_3938 [Aureococcus anophagefferens] Length = 201 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 51 QELIERIER--ISRDDSATALIVSLSSPGGSAYA----GEAIFRAIQKVKNRKPVITEVH 104 +E+ +++R A+++ + SPGG A I R I +++ V Sbjct: 6 REVRAQVDRVLAVVRPGDEAVVL-VESPGGEVSAVGAVAGQIRRQIARLRRATRATACVD 64 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK----SVKSSPM 160 +AAS GY+ + ++ + AA +LVGS+GV+ P V+ ++ + + + + Sbjct: 65 AIAASGGYMAAVVAHEVRAAPFALVGSVGVVSYVPNVQRLCERSEIDVHARTGVLTAGSD 124 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKK 220 K V P+ + ++ + + F + R D L+ G W GA A Sbjct: 125 KRTVDVVGVVTPEDERKAREELRLIHDVFKSHCVKYRPRLADDIDSLASGAAWLGAHALS 184 Query: 221 VGLIDVVGGQEEVWQSL 237 +GL+D V ++ L Sbjct: 185 LGLVDAVDTSDDYLARL 201 >gi|325578442|ref|ZP_08148577.1| SppA protein [Haemophilus parainfluenzae ATCC 33392] gi|325160178|gb|EGC72307.1| SppA protein [Haemophilus parainfluenzae ATCC 33392] Length = 223 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSAY 81 +S E P V + +G I S+ E+ I DD +++ L SPGG + Sbjct: 94 NSEKETPKPCVYVLDFKGDISASETTALREEISAIINVAKADDE---VLLRLESPGGVVH 150 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P Sbjct: 151 GYGLAASQLARLKQKGIKLTVAVDKVAASGGYMMACVADRIVSAPFAIIGSIGVVAQIPN 210 Query: 141 VKPFLDKL 148 + L + Sbjct: 211 IHRLLKNM 218 >gi|294846003|gb|ADF43161.1| SPP1Cm [Chlamydomonas reinhardtii] Length = 631 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 39/152 (25%) Query: 35 SPHVARIAIRGQIE-----------------------DSQELIERIERISRDDSATALIV 71 P +A + + G I D+ +L+ + + D+ A++V Sbjct: 405 EPCIAVVTVSGTIVQGPVPPGSLAANNQQQQQQQQVVDAAKLVADLRMMMDDNLVRAVVV 464 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 ++SPGGSA A ++I R +Q++K K V+ + ++AA Y I+ A+N +VA ++ G Sbjct: 465 RVNSPGGSALASDSIRRELQRLKTLGKTVVVSMGDVAAGGAYYIASAANAVVAQPGTVTG 524 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 IG K+V ++P+K Sbjct: 525 GIGAA---------------EDKTVTAAPLKD 541 >gi|332557495|ref|ZP_08411817.1| Periplasmic serine protease [Rhodobacter sphaeroides WS8N] gi|332275207|gb|EGJ20522.1| Periplasmic serine protease [Rhodobacter sphaeroides WS8N] Length = 306 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 15/202 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E ++ ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 89 LAETLDHLAASEDAAAIVLEIDSPGGLVTGIEAAAEAIAAAAAVKPVHALVSPLAASAAY 148 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEV 170 ++ ++ IV ++ GSIGV + G + + SS P + Sbjct: 149 WLASQASEIVMTPGAVAGSIGVALT----TAAHVQPGANGAQIFEMSSRHARAKRPDAS- 203 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---LVLSD-----GRIWTGAEAKKVG 222 +Q +D + F VS R IP + L ++D G + EA + G Sbjct: 204 TEAGRAELQRSLDEAEAAFHAAVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 263 Query: 223 LIDVVGGQEEVWQSLYALGVDQ 244 L D + ++ L A + Sbjct: 264 LADRTETRAAFYERLTARTAPK 285 >gi|196019570|ref|XP_002119003.1| hypothetical protein TRIADDRAFT_62972 [Trichoplax adhaerens] gi|190577377|gb|EDV18511.1| hypothetical protein TRIADDRAFT_62972 [Trichoplax adhaerens] Length = 203 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 8/132 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 E+ S + G I+ + + I I ++ + +++ L SPGG+ Sbjct: 74 ENKSSKTYLLKFNGDIQAKEVDSLKKEITAILSVANNGDN--VVLMLESPGGTVNGYGLA 131 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 ++++ R + V +AAS GY+++ ++ I+AA ++VGSIGVL + P + Sbjct: 132 TSELERLTARGLHLTVLVDRVAASGGYMMAVVADRIIAAPFAIVGSIGVLTEIPNFNELM 191 Query: 146 DKLGVSIKSVKS 157 +K G+ + + S Sbjct: 192 EKNGIKYEQITS 203 >gi|300905036|ref|ZP_07122850.1| peptidase, S49 family protein [Escherichia coli MS 84-1] gi|300403058|gb|EFJ86596.1| peptidase, S49 family protein [Escherichia coli MS 84-1] Length = 113 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 58/113 (51%) Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I +V++ KPV ++M SAG L++ A++ + +T+ GSIGV+ + L+K Sbjct: 1 DIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEK 60 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 GV I + S K + +P+S + + +Q +D++ F + VS + Sbjct: 61 QGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLS 113 >gi|218528332|ref|YP_002419148.1| peptidase S49 [Methylobacterium chloromethanicum CM4] gi|218520635|gb|ACK81220.1| peptidase S49 [Methylobacterium chloromethanicum CM4] Length = 299 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 16/199 (8%) Query: 25 FSWSSHVEDNSPHVARIAIRGQI-------------EDSQELIERIERISRDDSATALIV 71 + + + VA + I G I + + + + A+++ Sbjct: 61 LDGARYAVTTADGVAIVPITGPIFPRANLMTEMSGSVSATMVANDLRLAQANPDVGAIML 120 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 + SPGGS A+ I ++ RK V+ V AASA Y ++ A++ +V +T +VGS Sbjct: 121 LVDSPGGSPTGMNALADQIYAMRGRKRVLAHVSGAAASAAYWLATAASELVVEKTGMVGS 180 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 IGV+ +SI+ V SS P P ++ ++D F+ Sbjct: 181 IGVVAAISKQVEPDASGSLSIEIVSSSAPNKRPDP---QTDDGAAEIRAILDGIEAQFIA 237 Query: 192 LVSESRNIPYDKTLVLSDG 210 V+ R K Sbjct: 238 DVARGRGTTVAKVKSDFGA 256 >gi|221641142|ref|YP_002527404.1| periplasmic serine protease [Rhodobacter sphaeroides KD131] gi|221161923|gb|ACM02903.1| Periplasmic serine protease [Rhodobacter sphaeroides KD131] Length = 305 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 11/201 (5%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 88 LAETLAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAATLKPVHALVSPLAASAAY 147 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ + IV ++ GSIGV G I + SS P + Sbjct: 148 WLASQATEIVMTPGAVAGSIGVALTAA-AHVQPGTNGAQIFEM-SSRHARAKRPDAS-TE 204 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---LVLSD-----GRIWTGAEAKKVGLI 224 +Q +D + F VS R IP + L ++D G + EA + GL Sbjct: 205 AGRAELQRSLDEAEAAFHAAVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRGLA 264 Query: 225 DVVGGQEEVWQSLYALGVDQS 245 D + + L A V +S Sbjct: 265 DRTETRAAFYARLTARTVPKS 285 >gi|77465659|ref|YP_355162.1| periplasmic serine protease (ClpP class) [Rhodobacter sphaeroides 2.4.1] gi|77390077|gb|ABA81261.1| Periplasmic serine proteases (ClpP class) [Rhodobacter sphaeroides 2.4.1] Length = 305 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 15/202 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 88 LAETMAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAAAVKPVHALVSPLAASAAY 147 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEV 170 ++ ++ IV ++ GSIGV + G + + SS P + Sbjct: 148 WLASQASEIVMTPGAVAGSIGVALT----AAAHVQPGANGAQIFEMSSRHARAKRPDAS- 202 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---LVLSD-----GRIWTGAEAKKVG 222 +Q +D + F VS R IP + L ++D G + EA + G Sbjct: 203 TEAGRAELQRSLDEAEAAFHAAVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 262 Query: 223 LIDVVGGQEEVWQSLYALGVDQ 244 L D + + + L A + Sbjct: 263 LADRIETRAAFYARLAARTAPK 284 >gi|308231618|ref|ZP_07663896.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu001] gi|308369980|ref|ZP_07666835.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu002] gi|308216724|gb|EFO76123.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu001] gi|308325734|gb|EFP14585.1| peptidase, S49 (protease IV) family [Mycobacterium tuberculosis SUMu002] Length = 313 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 15/232 (6%) Query: 40 RIAIRGQIEDSQELIERIERISRDDSATALIVSLS---SPGGSAYAGEAIFRAIQKVKNR 96 + G+ ++ + I R + D LI + SP G+ + + AI Sbjct: 56 VLTGGGRPMALRDAVAAIHRAAEDPRVAGLIARVQLPPSPAGAV---QELREAIAAFSAV 112 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 KP + + Y ++ A + + VG +G +++ L K G+ + V Sbjct: 113 KPSLAWAETYPGTLSYYLASAFGEVWMQPSGSVGLVGFATNATFLRDALHKAGIEAQFVA 172 Query: 157 SSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K+ + F+E + + ++DS + V++SRNI D L+D Sbjct: 173 RGEYKSAANLFTEDGFTDAHREAVTRMLDSLQDQVWQAVAKSRNIGVDALDELADRAPLL 232 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYAL-GVDQSIRK------IKDWNPPKNYW 259 +A GLID +G +++ + + L GV++ + D PP+ Y Sbjct: 233 RDDAVTCGLIDRIGFRDQAYARMAELVGVEKGSPESSGSQTSPDEKPPRMYL 284 >gi|150024898|ref|YP_001295724.1| S49 family serine protease [Flavobacterium psychrophilum JIP02/86] gi|149771439|emb|CAL42908.1| Putative S49 family serine protease [Flavobacterium psychrophilum JIP02/86] Length = 294 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 16/234 (6%) Query: 28 SSHVEDNSPHVARIAIRGQIE--------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + + +A++ + G+I + E++ ++ + D+ A + + SPGGS Sbjct: 64 GNSISVPKNSIAQVKMMGEIVAYSDWCAIGADEIVAQLYKAQEMDNVDATVFRIDSPGGS 123 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISC-ASNIIVAAE--TSLVGSIGVLF 136 A + FR K K KP++ V + S GY + + I+A +S GSIGV+ Sbjct: 124 TKAID-AFREFSKYKT-KPIVGLVKD-GLSLGYWAAIEVCDYIMADGDVSSRFGSIGVVA 180 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQ-MMQDVVDSSYHWFVRLVSE 195 + L+ G+ I + + + + ++++ + F V Sbjct: 181 SFRDNTKALEVAGIKIHEIYPPESNHKNKDVKDARSGDYEGIIKNSLSPLAGMFQGGVIS 240 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 R + VL +G ++ EA ++GLID +G Q L + + + Sbjct: 241 KRPNLIKEEGVL-NGGVYFAKEALRLGLIDGIGDSRMAIQKAKQLALQSVSKNL 293 >gi|330877863|gb|EGH12012.1| signal peptide peptidase SppA, 36K type [Pseudomonas syringae pv. glycinea str. race 4] Length = 149 Score = 112 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 10/154 (6%) Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 +DKLGV ++ S KA PF Q Q V+D+++ F+ V + Sbjct: 3 AAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQFIASVKQ 62 Query: 196 SRN--IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 R + L G IWTG +A +GL+D +G V + + + I ++ Sbjct: 63 GRGDRLKDKDHPELFSGLIWTGEQAVALGLVDGLGSASYVARDVI------KEKDIVEYT 116 Query: 254 PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 ++ + K L S + + I ++ L Sbjct: 117 VEESPFDRFSKKLGTS--IAERIAMLVGFNGPSL 148 >gi|221638467|ref|YP_002524729.1| periplasmic serine protease [Rhodobacter sphaeroides KD131] gi|221159248|gb|ACM00228.1| Periplasmic serine protease [Rhodobacter sphaeroides KD131] Length = 304 Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 15/202 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 87 LAETLAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIAAAAVVKPVHALVSPLAASAAY 146 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEV 170 ++ + IV ++ GSIGV + G + + SS P + Sbjct: 147 WLASQATEIVMTPGAVAGSIGVALT----AAAHVQPGANGAQIFEMSSRHARAKRPDAS- 201 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---LVLSD-----GRIWTGAEAKKVG 222 +Q +D + F VS R IP + L ++D G + EA + G Sbjct: 202 TEAGRAELQRSLDEAEAAFHAAVSAGRAIPAAELAARLSVTDDPQDGGATFRAPEAIRRG 261 Query: 223 LIDVVGGQEEVWQSLYALGVDQ 244 L D + + L A + Sbjct: 262 LADRTETRAAFYARLTARTAPK 283 >gi|809692|emb|CAA28163.1| unnamed protein product [Escherichia coli] Length = 125 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q++++R P+ V ++AAS GY+++C ++ IV+A ++VGSIGV+ Q P FL Sbjct: 22 ASQLQRLRDRNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFL 81 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + I+ + K + E + + V+ Sbjct: 82 KSKDIDIELHTAGQYKRTLTLLGENTEEGRGEIPRRVER 120 >gi|332829802|gb|EGK02444.1| hypothetical protein HMPREF9455_01401 [Dysgonomonas gadei ATCC BAA-286] Length = 304 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 88/231 (38%), Gaps = 12/231 (5%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI--------EDSQELIERIERISRDDSATALIVSLSS 75 Y + + VA I I G + ++ + I + I+ ++ Sbjct: 67 YIQKDPFADLDENSVAIIPIIGSMFKYSSWWSYGMDDIADLIRLADASPNIIGTILLCNT 126 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA-AETSLVGSIGV 134 PGG++ + + A++ KP + + S G + + A ++G+IGV Sbjct: 127 PGGTSQSIIQLEDAMRN--RTKPSVGLIDGHCCSGGIYALSFCDRLTATNPMCVIGNIGV 184 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-NPKAVQMMQDVVDSSYHWFVRLV 193 Q + + GV SV K + ++E N ++++ + F ++ Sbjct: 185 YNQIINDDKWYENQGVEFISVYPPESKYKNLAYTEAKNGNTKILIEESLSPFAIHFQNII 244 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 ++R + +G+ + +A+K GLID + E + L L ++ Sbjct: 245 KQNRPNLDLSVEGIIEGKDFYAQDAEKNGLIDAITNLEGAVKLLRILHTEK 295 >gi|77462189|ref|YP_351693.1| peptidase [Rhodobacter sphaeroides 2.4.1] gi|77386607|gb|ABA77792.1| probable peptidase [Rhodobacter sphaeroides 2.4.1] Length = 319 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 15/202 (7%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 L E + ++ + A A+++ + SPGG EA AI KPV V +AASA Y Sbjct: 102 LAETLAHLAASEDAAAIVLEIDSPGGLVCGIEAAAEAIATAAAVKPVHALVSPLAASAAY 161 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK--SSPMKAEPSPFSEV 170 ++ ++ IV ++ GSIG+ + G + + SS P + Sbjct: 162 WLASQASEIVMTPGAVAGSIGIALT----AAAHVQPGANGAQIFEMSSRHARAKRPDAS- 216 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT---LVLSD-----GRIWTGAEAKKVG 222 +Q +D + F VS R IP + L ++D G + A + G Sbjct: 217 TEAGRAELQRSLDEAEAAFHAAVSTGRAIPAAELAARLSVTDDPQDGGATFRAPAAIRRG 276 Query: 223 LIDVVGGQEEVWQSLYALGVDQ 244 L D + + L A + Sbjct: 277 LADRSETRAAFYARLTARTAPK 298 >gi|167948600|ref|ZP_02535674.1| peptidase S49 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 141 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 10/141 (7%) Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLV 206 G+ + + + K PFS VN + +Q ++D + F+ V + R + D+ Sbjct: 7 GIERRLMTAGEHKGILDPFSPVNDYEREHIQRMLDQLHAQFIETVKQGRGERLKVDEYPE 66 Query: 207 LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLK 264 L G W+G E K+GL+D G V + + I D+ P ++ W F + Sbjct: 67 LFSGLFWSGEEGLKIGLVDAFGSSSYVAREVIG------AEDIVDFTPEEDIWDRFAEKL 120 Query: 265 NLSISSLLEDTIPLMKQTKVQ 285 + + L + ++ Sbjct: 121 GTGAAQAIARMGGLTEGWSLR 141 >gi|257091816|ref|YP_003165457.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044340|gb|ACV33528.1| peptidase S49 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 130 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + +AAS Y I C+++ A VGSI V Y GV + + Sbjct: 2 VAIANRLAASGSYWIGCSASEFYVAPGGEVGSIAVWQAYFDYSQAFAAGGVKPTLISAGK 61 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEA 218 K E +P + ++ +A +MQ VD Y F ++V+ R +P + + GR+ GA+A Sbjct: 62 YKVEGNPCAPLDEEAQGLMQSRVDDYYTSFTKVVARGRAVPIAQVRDGMGQGRV-LGADA 120 >gi|145633615|ref|ZP_01789342.1| predicted inner membrane peptidase [Haemophilus influenzae 3655] gi|144985492|gb|EDJ92308.1| predicted inner membrane peptidase [Haemophilus influenzae 3655] Length = 223 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 8/122 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ V + G I S+ E I I +++ + +++ L SPGG + Sbjct: 100 DEKKACVYVLDFCGDISASETTALREEISAILNVAKPED--EVLLRLESPGGIVHNYGFA 157 Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + ++K + + V ++AAS GY+++C ++ IV+A +++GSIGV+ Q P V L Sbjct: 158 ASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLL 217 Query: 146 DK 147 K Sbjct: 218 KK 219 >gi|303251829|ref|ZP_07338000.1| truncated periplasmic protease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649259|gb|EFL79444.1| truncated periplasmic protease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 224 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + + G ++ L I+ IS + +++ L SPGG + Sbjct: 99 EAPKSRLFVLNFTGDVQAHAVSSLRREIDAVISLANKEDEVLLRLESPGGVVHGYGLAAS 158 Query: 89 AIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +Q+++ P+ V ++AAS GY+++C +N IVAA +++GS+GV+ Q P + L Sbjct: 159 QLQRLRTHNIPLTVAVDKVAASGGYMMACVANKIVAAPFAIIGSVGVVAQVPNIHRLLKN 218 >gi|325142766|gb|EGC65139.1| putative signal peptide peptidase SppA, 36K type [Neisseria meningitidis 961-5945] Length = 224 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 10/130 (7%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGS 79 E + + G + E+ + +D +++ L SPGG Sbjct: 93 GGEKSSETQKSRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDE---VLLRLESPGGV 149 Query: 80 AYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +++++ R P+I V ++AAS GY+++C ++ IV+A ++VGS+GV+ + Sbjct: 150 VHGYGLAASQLRRLRERNIPLIVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEV 209 Query: 139 PYVKPFLDKL 148 P + L + Sbjct: 210 PNIHRLLKNM 219 >gi|83951435|ref|ZP_00960167.1| Periplasmic serine protease (ClpP class) [Roseovarius nubinhibens ISM] gi|83836441|gb|EAP75738.1| Periplasmic serine protease (ClpP class) [Roseovarius nubinhibens ISM] Length = 309 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 30/216 (13%) Query: 35 SPHVARIAIRGQIEDSQELIERI-------------ERISRDDSATALIVSLSSPGGSAY 81 S VA + IRG + E++ER I+ ++ +A ++ ++SPGG Sbjct: 58 SRRVAVMPIRGILTPDSEVLERYFGWATYQGIEAACAEIAANEDVSAAVLDVNSPGGMVM 117 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY--- 138 E +A+ + KPV V+ MAASA Y I+ ++ I S +GSIG + Sbjct: 118 GLEGAAQAVAALAAIKPVHVLVNPMAASAAYFIASQASDITMIPGSELGSIGTMRSSVWP 177 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + D+ GV + S + + + +Q +D + F+ V+ R Sbjct: 178 VKPDNWGDQWGVHLSSHARAKNPN------PTSETGLAEIQRSLDEAEAAFLDAVATGRG 231 Query: 199 IPYD---KTLVLSD-----GRIWTGAEAKKVGLIDV 226 + K L ++D G ++ +A L D Sbjct: 232 LDRAGLPKHLSVTDDEADGGAMYRTDQALARNLADG 267 >gi|298487181|ref|ZP_07005230.1| Peptidase, U7 family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158205|gb|EFH99276.1| Peptidase, U7 family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 121 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 8/116 (6%) Query: 40 RIAIRGQIEDSQEL-----IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 + G I+ S I + ++ D +++ L S GG ++ + +++ Sbjct: 1 MLDFDGDIKASATESMRHEITALLTLATDKD--EVVLRLESGGGMVHSYGLASSQLARIR 58 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 P+ + ++AAS GY+++C N I++A +++GSIGV+ Q P V L K G Sbjct: 59 QAGIPLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVAQLPNVNRLLKKHG 114 >gi|213621365|ref|ZP_03374148.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 107 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 FL + I+ + K + E + Q ++ ++ ++H F V R P Sbjct: 1 RFLKSKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKEFVQRMR--PAL 58 Query: 203 KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ G W G +A + GL+D + +EV L Sbjct: 59 DIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 95 >gi|144897349|emb|CAM74213.1| Periplasmic serine proteases (ClpP class) [Magnetospirillum gryphiswaldense MSR-1] Length = 173 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + F KLGVS VK S + +P+A + + +D+ Y F ++ RN+ Sbjct: 3 LADFWPKLGVSWDGVKRGDNADMMSANHKFSPQAWERLNRSLDAIYADFTGKAAKGRNLA 62 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV---WQSLYALGVDQSIRKIKDWNPPKN 257 D+ L+ GRIW G++A+ GL+D +GG + + L L D + + + PK Sbjct: 63 PDRMEELAKGRIWAGSDAQARGLVDALGGWDVAQAQVRELLKLAPDADL-DLVAYPKPKA 121 Query: 258 YWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 W K + L + + ++ + A Sbjct: 122 PWQKLAKMMGGGGGLAEDEGMRALLRLARVLA 153 >gi|85713379|ref|ZP_01044387.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] gi|85692795|gb|EAQ30785.1| Periplasmic serine protease, ClpP family protein [Idiomarina baltica OS145] Length = 104 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Query: 87 FRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 +Q++ + V V ++AAS GY+++C N I++A + +GSIGV+ Q P V +L Sbjct: 3 AAQLQRLIDHGLKVTIAVDKVAASGGYMMACVGNNILSAPFAFIGSIGVVAQLPNVNKWL 62 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 + I+ + K + E + ++ + ++S +H Sbjct: 63 KNHDIDIEHFTAGEYKRTLTVLGENTEEGRRIFKQDLESIHH 104 >gi|146278618|ref|YP_001168777.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] gi|145556859|gb|ABP71472.1| peptidase S49 [Rhodobacter sphaeroides ATCC 17025] Length = 327 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 81/218 (37%), Gaps = 21/218 (9%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + +RG + + L E + ++ + A A+++ + SPGG E Sbjct: 60 LAVVPVRGILTPNMAQYERWFGWATYHGLAETLTHLAASEDAAAIVLEIDSPGGLVCGIE 119 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 A AI KPV V +AASA Y ++ ++ IV ++ GSIGV Sbjct: 120 AAAEAIAAAAAVKPVHALVSPLAASAAYWLASQASEIVMTPGAVAGSIGVALT----AAA 175 Query: 145 LDKLGVSIKSVK--SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + G + + SS P + +Q +D + F + + Sbjct: 176 HVQPGANGAQIFEMSSRHARAKRPDAS-TKAGRAELQRSLDEAEAAFHAIPAAELAARLS 234 Query: 203 KTLVLSDG-RIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 T DG + AE + GL D + + L A Sbjct: 235 VTDDPQDGAATFRAAEVIRRGLADRTETRAAFYARLTA 272 >gi|118361832|ref|XP_001014144.1| hypothetical protein TTHERM_00406670 [Tetrahymena thermophila] gi|89295911|gb|EAR93899.1| hypothetical protein TTHERM_00406670 [Tetrahymena thermophila SB210] Length = 279 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 13/191 (6%) Query: 57 IERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYL 113 + + ++ +A AL++S S S I + IQ + + PV T E S GYL Sbjct: 44 LNKAAKHKNAAVALVISADSS--SYAQAYNIIKQIQIFQKNTKIPVYTFGEEQVFSGGYL 101 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKSVKSSP-----MKAEPSPF 167 I CA TSLVG++GV + + ++ + K L +I +S S Sbjct: 102 ILCAGQKSFVDNTSLVGNLGVNYTHTNIEKLVTKTLDFTINDFHTSDIAFSHRADSLSKQ 161 Query: 168 SEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNI-PYDKTLVLSDGRIWTGAEAKKVGLID 225 E N + + + D F L + P L G I+ G +A + GL+D Sbjct: 162 KEDNEEFFRQFNSHLQDQVIQTFEGLRKPKVKMQPELYQNDLLQGEIYNGKKAVEYGLVD 221 Query: 226 VVGGQEEVWQS 236 +G V Sbjct: 222 EIGTYYSVINK 232 >gi|145552723|ref|XP_001462037.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124429874|emb|CAK94664.1| unnamed protein product [Paramecium tetraurelia] Length = 310 Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 87/216 (40%), Gaps = 24/216 (11%) Query: 48 EDSQELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVH 104 + +++ ++ + I L++S++S G + + A Q+ P T + Sbjct: 34 SSATKILFQLRKHIQEKPKV--LMLSINSAYGDITQAQIVAEAFQQAAQNLDAPFYTFID 91 Query: 105 EMAASAGYLISCASNIIVAAETSLVG-------SIGVLFQYPYVKPFLDKLGVSIKSVKS 157 A + Y ++ + A SL+G SIG + L+ ++ + KS Sbjct: 92 CYALGSAYYLASCGTEVYANPFSLIGEVQPSKRSIG-------FQNVLENFKINYR--KS 142 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 F++V+ K +Q + V + + + + + ++R K + +I+T + Sbjct: 143 RRETILLDAFTKVSEKQLQFVNKEVQTEFQFALDQIKQNR---AGKIKKFEESKIYTAQQ 199 Query: 218 AKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 A + GLID + +EV Y + + KD + Sbjct: 200 ALENGLIDDICTFDEVLAKKYPKYKFRELTLYKDES 235 >gi|213620929|ref|ZP_03373712.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 412 Score = 98.7 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 11/103 (10%) Query: 21 TVVYFSWSSHV-EDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALI 70 + Y+ +S D +A I G I D +E +I D A++ Sbjct: 310 AISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIV 369 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGY 112 + ++SPGGS A E I + + KPV+ + MAAS GY Sbjct: 370 LRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGY 412 Score = 88.7 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|167945133|ref|ZP_02532207.1| peptidase, S49 (protease IV) family protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 159 Score = 98.7 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 13/113 (11%) Query: 28 SSHVEDNSPHVARIAIRG----------QIEDSQE---LIERIERISRDDSATALIVSLS 74 +S+V + VA I + G I + L + + +++ + Sbjct: 46 NSYVSEIRDGVAIIPVVGPLFRYANLFTAISGASSYEILAKDFTTALDNPEVKGIVLDID 105 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 SPGG I + + KP+I AAS Y I+ A + +V +ETS Sbjct: 106 SPGGEVNGCAEFANMIFEARGTKPIIAYTSGDAASGAYWIASACDEVVVSETS 158 >gi|145631779|ref|ZP_01787539.1| protease IV [Haemophilus influenzae R3021] gi|144982569|gb|EDJ90119.1| protease IV [Haemophilus influenzae R3021] Length = 329 Score = 97.9 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 116/295 (39%), Gaps = 55/295 (18%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI + K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 N KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 NAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNILP-- 248 Query: 209 DGRIWTGA----------EAKKVGLI-DVVG--GQEEVWQSLYALGVDQSIRKIK 250 + + + A++ GL+ DVV ++ +L+ G D I+ Sbjct: 249 NAKQYLAELKALKGNSTAYAQQRGLVTDVVTRLDLDKKLTALFGKGSDGKANLIE 303 >gi|69245972|ref|ZP_00603744.1| signal peptide peptidase [Enterococcus faecium DO] gi|68195502|gb|EAN09946.1| signal peptide peptidase [Enterococcus faecium DO] Length = 165 Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 15/105 (14%) Query: 32 EDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPGG 78 D++ + ++++ G I + + +E+++ I D + + + ++SPGG Sbjct: 55 GDSTQKIVKLSVDGTIAAGGSSGLFASEGYNHKNFMEQLKAIEEDPTVKGIFLEVNSPGG 114 Query: 79 SAYAGEAIFRAIQKVKNRK--PVITEVHEMAASAGYLISCASNII 121 Y I + + ++ P+ + MAAS GY IS ++ I Sbjct: 115 GVYESAEIAKKLDTIRKEHDIPMYVSMKNMAASGGYYISAQADKI 159 >gi|145510482|ref|XP_001441174.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408413|emb|CAK73777.1| unnamed protein product [Paramecium tetraurelia] Length = 248 Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 85/192 (44%), Gaps = 8/192 (4%) Query: 43 IRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--P 98 ++GQI S ++ + +++ +++ A+ + ++S GGS I R +V+ + P Sbjct: 23 LQGQITSSMTYKVYKALKK-FHPENSKAIALIINSTGGSLAHAHIIQRKFDQVRKKHNIP 81 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 + T + A S + + C + I +TS+VG++G Q + + + +++ S Sbjct: 82 LYTFAEDYALSGAFYLLCMGDKIFCNKTSIVGAVGTQIQTLNILNLFEHYNLEVRTFNSG 141 Query: 159 PMKAEPSPFSEVNPK-AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 + ++ + +++++ + +S+ +K VL G I+ G + Sbjct: 142 SNETFLQQLDPLSNNTSTNILENISEQQNQQLQLQISQMIGNRQNKEQVL-TGSIFNGQQ 200 Query: 218 AKK-VGLIDVVG 228 + ID +G Sbjct: 201 LFEDYKFIDGIG 212 >gi|213584577|ref|ZP_03366403.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 84 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AAS GY IS +N IVA+ ++L GSIG+ V+ L +GV V +SP+ S Sbjct: 1 AASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGVHSDGVSTSPLADI-SM 59 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFV 190 ++P+ QMMQ ++ Y F+ Sbjct: 60 TKALSPEVQQMMQLSIEYGYKRFI 83 >gi|298487182|ref|ZP_07005231.1| Peptidase, U7 family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158206|gb|EFH99277.1| Peptidase, U7 family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 182 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 2/96 (2%) Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + + + + + K + F E K + Q +D ++ F V+ R P Sbjct: 47 ARHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSID 104 Query: 206 VLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G IW G A L+D + +E Sbjct: 105 EVATGEIWLGMAAVDKLLVDELKTSDEYLAERAKDA 140 >gi|325578441|ref|ZP_08148576.1| protease SohB [Haemophilus parainfluenzae ATCC 33392] gi|325160177|gb|EGC72306.1| protease SohB [Haemophilus parainfluenzae ATCC 33392] Length = 128 Score = 95.6 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 5/97 (5%) Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + + K + E K Q Q ++ ++ F + V+++R P+ ++ G W Sbjct: 2 ITAGEFKRTVTVLGENTEKGKQKFQAELEETHQLFKQFVAQNR--PHLDVDKVATGEHWF 59 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 G +A + L+D + +++ D+S+ +K Sbjct: 60 GQQALALQLVDELATSDDIILEKMK---DKSVIAVKY 93 >gi|294677522|ref|YP_003578137.1| S49 family peptidase [Rhodobacter capsulatus SB 1003] gi|3128372|gb|AAC16224.1| potential peptidase [Rhodobacter capsulatus SB 1003] gi|294476342|gb|ADE85730.1| peptidase, S49 family [Rhodobacter capsulatus SB 1003] Length = 303 Score = 95.6 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 10/179 (5%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++V +PGG E A++ + KPV +AASAGY ++ + +V + Sbjct: 100 VVVEFDTPGGYTLGIEDAVTALRDLAAVKPVHALAAPLAASAGYWLASQARELVMTPRAA 159 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 VGSIGV GV + S P ++ +D + Sbjct: 160 VGSIGVAVTAAANVAPGAASGVQLFDFTS-RHARAKWPD-PATEDGKAEIRRGLDRTEAR 217 Query: 189 FVRLVSESRNIPYDKT---LVLSD-----GRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 F V+E R I + L +SD G ++ AEA GL D + + + L A Sbjct: 218 FHAAVAEGRGIAPEDLAARLSVSDDPEDGGAVFEAAEALARGLADRIETRAAFYARLRA 276 >gi|145499263|ref|XP_001435617.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402751|emb|CAK68220.1| unnamed protein product [Paramecium tetraurelia] Length = 243 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 14/230 (6%) Query: 36 PHVARIAIRGQIEDSQELIERIERISRDDS---ATALIVSLSSPGGSAYAGEAIFRAIQK 92 + RI I+ I +L + I + S A L V + GGS + I +QK Sbjct: 5 NRIIRINIQRPITS--KLTQLIRNQLENFSFYQAKVLAVQIDCQGGSVVQAKQIQYLLQK 62 Query: 93 V--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 K + P++ ++ +I ++ I+AA S +G Q + + + + Sbjct: 63 FAQKQKLPILCFAGAQVYNSANIILSCADKIIAANNSEIGDYTFSGQLWNISELIKRENL 122 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP-------YDK 203 + ++ K +PF + + + + ++ + ++ + + D Sbjct: 123 EVINLSHGKYKDRLNPFQPYKETDKEWLNNSMKNNEIELKKQITLNLSKKFINLHEQTDC 182 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 I TG +A+K+ ++D +G +E QS Y K + +N Sbjct: 183 LNEAFQSSILTGYQAQKLKIVDEIGTIDEYLQSNYKNMKTIEFFKPQAYN 232 >gi|145642067|ref|ZP_01797638.1| protease IV [Haemophilus influenzae R3021] gi|145273247|gb|EDK13122.1| protease IV [Haemophilus influenzae 22.4-21] Length = 295 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 111/292 (38%), Gaps = 51/292 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI + K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISQFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 N KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 NAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D+ L Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDRILP-- 248 Query: 209 DGRIWTGA-EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYW 259 + + + +A K G + L D R D + +W Sbjct: 249 NAKQYLAELKALK--------GNSTAYAQQRGLVTDVVTRLDLDKKTSRTFW 292 >gi|303251830|ref|ZP_07338001.1| truncated periplasmic protease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649260|gb|EFL79445.1| truncated periplasmic protease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 129 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + E K Q Q ++ ++ F + V+++R P ++ G Sbjct: 1 MDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHQLFKQFVAQNR--PQLDIEKIATGE 58 Query: 212 IWTGAEAKKVGLIDVVGGQEEVW 234 W G +A + L+D + +++ Sbjct: 59 HWFGKQALALDLVDEINTSDDLL 81 >gi|289679276|ref|ZP_06500166.1| serine peptidase S49 family protein [Pseudomonas syringae pv. syringae FF5] Length = 112 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q L ++ D S ++I+++ SPGG A + I + RK ++ Sbjct: 24 EISGA-TSTQVLATDLQSALDDPSIKSIILNIDSPGGVAAGINELADQIHAGRARKRIVA 82 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGS 131 V ASA Y ++ A++ IV ET+L+GS Sbjct: 83 YVGGTGASAAYWLASAASEIVIDETALLGS 112 >gi|145629712|ref|ZP_01785508.1| protease IV [Haemophilus influenzae 22.1-21] gi|144978049|gb|EDJ87828.1| protease IV [Haemophilus influenzae 22.1-21] Length = 304 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 115/294 (39%), Gaps = 50/294 (17%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVA----RIAIRGQIEDSQE-------- 52 ++ + V L V L V S+SS + ++ + + + G + D+++ Sbjct: 15 IRDLVMNVVFLGFVLLLVAIISFSSGGKKSTALTSEGALLLNLDGYLADNRDETLRWQDA 74 Query: 53 -----------------LIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVK 94 ++ I++ D L++ L+ G+ + I AI K Sbjct: 75 LSELNGEHVPRKISTFDVVFAIQQAEDDPKIKGLVLDLNYFEGADLPALDFIGGAISHFK 134 Query: 95 NR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGV 150 + KPVI + Y ++ ++ I +GS+ + Y K LDKL V Sbjct: 135 DAGKPVIAYADNY-SQGQYYLASFADEIYLNS---IGSVDIHGLSQENLYFKEMLDKLAV 190 Query: 151 SIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + K+ PF ++++ +A MQ + ++ +V VSE+RNI D L + Sbjct: 191 TPHIFRVGTYKSAVEPFLRNDMSAEAKANMQRWLGEMWNNYVLSVSENRNIKKDNVLPNA 250 Query: 209 DGRIWTGAEAKK---------VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 + + +A K GL+ V + ++ + L AL + K + + Sbjct: 251 K-QYLSDLKALKGNSTAYAQQRGLVTDVVTRLDLDKKLTALFWQRKRWKSEPYR 303 >gi|270667919|ref|ZP_06222488.1| protease IV [Haemophilus influenzae HK1212] gi|270316754|gb|EFA28517.1| protease IV [Haemophilus influenzae HK1212] Length = 259 Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%) Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 A+ S FS + + Q ++ Y F+ +VS+ R + + L+ G++W G++A + Sbjct: 1 AKTSAFSPLAKPVQDIYQTEIEHGYDRFLEIVSKGRQLSKTQVDKLAQGQVWLGSDAFQN 60 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDT 275 GL+D +G E L + ++D++ WF D IS+LL DT Sbjct: 61 GLVDEIGSFNEAVNKAEQLVNQRQDTAVQDFSVE---WFTDDNVSLISTLLRDT 111 >gi|145507772|ref|XP_001439841.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407036|emb|CAK72444.1| unnamed protein product [Paramecium tetraurelia] Length = 251 Score = 92.5 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 24/202 (11%) Query: 78 GSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GS + I AI+ + P+ T + ++ + + A+E S++G G + Sbjct: 53 GSFVQSKNIATAIRNYAKYYKVPLYTFGEDFVLNSSVYLMTVGDKNFASEYSVIGDFGYV 112 Query: 136 FQYPYVKPFLDKLGVSIK---------SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 + K ++ LG+ + S K + SP+ ++ + V+ ++ + Sbjct: 113 QRRLGYKQLIENLGMQYHKIIIIREHKFIHSGEKKVKLSPYDDLKEEDVKWIEGQLKHRE 172 Query: 187 HWFVRLVSESRNIPYDKTLVLSDGRIW-----TGAEAKKVGLIDVVGGQEEVW-QSLYAL 240 + ++RN D+ +W TG +A K GL+D +G +++ Q + Sbjct: 173 SRLKEEIMQNRNQKVDQ-------EMWNQTLLTGQQALKYGLVDGLGVFDDIREQEYKGM 225 Query: 241 GVDQSIRKIKDWNPPKNYWFCD 262 + + D+ P N F Sbjct: 226 KSYDILSNLLDYYVPANATFSS 247 >gi|254361155|ref|ZP_04977299.1| S49 family endopeptidase [Mannheimia haemolytica PHL213] gi|153092646|gb|EDN73695.1| S49 family endopeptidase [Mannheimia haemolytica PHL213] Length = 204 Score = 92.5 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 5/107 (4%) Query: 33 DNSPHVARIAIRGQIEDSQ--ELIERIERI--SRDDSATALIVSLSSPGGSAYAGEAIFR 88 ++ + + G + + L I+ + + +++ L SPGG + Sbjct: 98 ESPSRLFVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAAS 157 Query: 89 AIQKVKNRKP-VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 +Q++++R + V ++AAS GY+++C +N IV+A +++GS+GV Sbjct: 158 QLQRLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGV 204 >gi|126735733|ref|ZP_01751478.1| Periplasmic serine protease (ClpP class) [Roseobacter sp. CCS2] gi|126714920|gb|EBA11786.1| Periplasmic serine protease (ClpP class) [Roseobacter sp. CCS2] Length = 301 Score = 92.2 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 24/222 (10%) Query: 38 VARIAIRGQIEDSQ-------------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 VA + +RG + + L + + +++ + A+++ + +PGG A E Sbjct: 55 VAVVPVRGLLTPNSYGLERWLGWTTYHGLADTMGQLAASEEVAAIVLEIDTPGGMVLAIE 114 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 A AI KPV V MA SAGY ++ I + +GSIGV P Sbjct: 115 AAGEAIAATAAVKPVHAVVCPMATSAGYWLASQCTDISMTPGAWIGSIGVQMS--TYSPV 172 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + S +P ++ +++ F ++ R I Sbjct: 173 QPGMHGDQWFNFRSQYARAKNPD-AATEPGTALIDQRLNALEADFHAAIAAGRGIAPADL 231 Query: 205 -------LVLSDGRIWTG-AEAKKVGLIDVVGGQEEVWQSLY 238 ++DG G EA+ GL D ++ + ++ Sbjct: 232 PARLSVTDDVADGGAVFGFQEARARGLADAQMTRDVFFADIF 273 >gi|145633616|ref|ZP_01789343.1| predicted inner membrane peptidase [Haemophilus influenzae 3655] gi|144985493|gb|EDJ92309.1| predicted inner membrane peptidase [Haemophilus influenzae 3655] Length = 127 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + + K + E K Q Q ++ ++ F + VS++R P ++ G W Sbjct: 1 MTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNR--PCLDIDKIATGEHWF 58 Query: 215 GAEAKKVGLIDVVGGQEEVWQS 236 G +A + L+D + +++ Sbjct: 59 GQQAIALQLVDEISTSDDLILE 80 >gi|146163651|ref|XP_001012050.2| hypothetical protein TTHERM_00984990 [Tetrahymena thermophila] gi|146145966|gb|EAR91805.2| hypothetical protein TTHERM_00984990 [Tetrahymena thermophila SB210] Length = 332 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 12/165 (7%) Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 EA+ +A +K++ P+ T + A YL+ + A S++GSI Y + Sbjct: 71 YEALRQASEKLRA--PLYTFSEDQALGDSYLLLSLGETVTANPFSIIGSINSRINYISFE 128 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM----QDVVDSSYHWFVRLVS---E 195 ++LG+ SS P + P +Q+ Q+V++S + ++ E Sbjct: 129 KLFERLGIKYDIYTSSSPA--FLPSRKPTPSDIQLAEQSNQEVLESIQNLILQKRGKHFE 186 Query: 196 SRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 ++ I ++ + G+ +T +A K GLID +G E S+Y+ Sbjct: 187 NKGISREQAKKEILSGQTFTAQQALKNGLIDQIGTFYEFKDSMYS 231 >gi|213584071|ref|ZP_03365897.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 310 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 46/282 (16%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR----IAIRGQIEDS------ 50 + FV + + + + ++ ++ + NS AR + I G I D Sbjct: 19 LNFVREMVLNLFFIFLVLVGVGIWMQIGN--GSNSEQTARGALLLDISGVIVDKPSTNHR 76 Query: 51 ---------------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEA-IFR 88 +++ I + D + T +++ L + G+ I + Sbjct: 77 LGALGRQLFGASSDRLQENSLFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGK 136 Query: 89 AIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A+++ ++ KPV + Y ++ +N I + V G Y K LDK Sbjct: 137 ALREFRDSGKPVFAVGENY-SQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDK 195 Query: 148 LGVSIKSVKSSPMKAEPSPF--SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-- 203 L VS + K+ PF +++P A + + + ++ VS +R I + Sbjct: 196 LKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLF 255 Query: 204 --TLVLSDGRIWTGAE----AKKVGLIDVVGGQEEVWQSLYA 239 + DG G + A L+D + +V ++L Sbjct: 256 PGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTK 297 >gi|213581681|ref|ZP_03363507.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 107 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 MMQ ++ Y F+ LV+++R ++ ++ G +WTG +AK GL+D +G ++ Sbjct: 1 MMQLSIEYGYKRFITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAK 60 Query: 237 LYALGVDQS-IRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 L + P D S+ ++L + I M Sbjct: 61 AAELAKLKQWHLDYYQDEPTVLDMVMDSMTGSVRAMLPEAIQAMLPA 107 >gi|330948407|gb|EGH48667.1| peptidase S49, SppA [Pseudomonas syringae pv. pisi str. 1704B] Length = 85 Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V +DKLGV ++ S KA PF Q Q V+D+++ F+ V Sbjct: 1 VTAAGFGFVGAMDKLGVDRRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTTHRQFIASV 60 Query: 194 SESRN--IPYDKTLVLSDGRIWTGA 216 + R + + L G IWTG Sbjct: 61 KQGRGDRLKDKEHPELFSGLIWTGE 85 >gi|320108131|ref|YP_004183721.1| peptidase S49 [Terriglobus saanensis SP1PR4] gi|319926652|gb|ADV83727.1| peptidase S49 [Terriglobus saanensis SP1PR4] Length = 213 Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 2/117 (1%) Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 Q +VD+ + F+ V+ R DK L L+ G++WTG +A + LID GG Sbjct: 98 QAYFQTLVDNMHGQFIHDVATGRGTSDDKILPLATGQVWTGQQAIGLHLIDKQGGFRVAL 157 Query: 235 QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVW 291 I+ K+ +L + +L + L+ Q G + +W Sbjct: 158 MDTARDAGISGEPGIQRPVKIKHGLLSNLISGDADNLFPNPSKLLDQA--PGFYYMW 212 >gi|254671316|emb|CBA08710.1| signal peptide peptidase SppA, 36K type [Neisseria meningitidis alpha153] Length = 129 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN--IPYDKTLVLSDGRIWT 214 + K PFS P+ ++ ++++ + F++ V R + + + + GR++T Sbjct: 8 AGSNKGMGDPFSPETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYT 67 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258 GA+A KVGL+D +G V + + + D+ P ++ Sbjct: 68 GADALKVGLVDGLGNIYSVARDVV------KAPDVVDYTPKDDF 105 >gi|300905038|ref|ZP_07122851.1| conserved domain protein [Escherichia coli MS 84-1] gi|300403056|gb|EFJ86594.1| conserved domain protein [Escherichia coli MS 84-1] Length = 170 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 13/102 (12%) Query: 38 VARIAIRGQIEDSQE-------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A + + G + +I R+++ + D +++ + +PGG Sbjct: 69 IAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAF 128 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 I +V++ KPV ++M SAG L++ A++ + +T Sbjct: 129 DCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQT 170 >gi|219117681|ref|XP_002179631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408684|gb|EEC48617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 101 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%) Query: 87 FRAIQKVKNRKP---VITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYV 141 + + +++N P V V ++AAS GY+I+C ++ + AA ++VGSIGV+ Q + Sbjct: 1 AQQLVRLRNE-PGLTVTIVVDKVAASGGYMIACTASPGRLFAAPFAVVGSIGVIGQTFNI 59 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 L+ GV + KA EV + + +QD+VD Sbjct: 60 HKTLEGWGVRPLVFRGGRDKAPVGLVGEVTEEGLAKVQDMVD 101 >gi|118382549|ref|XP_001024432.1| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila] gi|89306199|gb|EAS04187.1| peptidase, S49 (protease IV) family protein [Tetrahymena thermophila SB210] Length = 184 Score = 85.6 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 16/182 (8%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T +M ++ LI + N + A + SL+G G +Q K L+ V + V + Sbjct: 6 PVYTFAEDMVLNSANLILSSGNKVFAGKYSLLGDFGYSYQGFGYKGLLENYNVKAEFVHA 65 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-------NIPYDKTLV--LS 208 K + +PF ++ + Q M++ + S + V ++R + ++ L Sbjct: 66 GEKKVKLNPFQDLKQEDAQWMKNYLLESEYDLKSSVIQTRAQKFHDLKLSNEQVNKELLE 125 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 G I +AK++GLID + EE+ Y KI D P ++ LK+ ++ Sbjct: 126 KGMI-EAEQAKQIGLIDGIKTFEELAHEQY------HGVKILDAIPTGSFTNNLLKSNTL 178 Query: 269 SS 270 S Sbjct: 179 FS 180 >gi|257470301|ref|ZP_05634392.1| peptidase S14, ClpP [Fusobacterium ulcerans ATCC 49185] gi|317064512|ref|ZP_07928997.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium ulcerans ATCC 49185] gi|313690188|gb|EFS27023.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium ulcerans ATCC 49185] Length = 367 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 47/221 (21%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVS 72 ++FS + +D I I G+I S I+++E+I + + Sbjct: 5 LFFSIKNLSDDEGE----IRISGEITRWAWEEFGQTSSLIFIKQLEKIKNARKVS---IK 57 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++SPGG AI+ ++++ K + + MA SA LI+ A+ V + Sbjct: 58 INSPGGDISETLAIYHELKRLSQTKEITAYIDGMACSAATLIAIAAKKTVMGKGC----- 112 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 Y + + +G S + + + + ++ + + L Sbjct: 113 -----YFMIHNPMIYMGYS------------------NTGEMQEAI-EHLNKTKENMIDL 148 Query: 193 VSESRNIPYDKTLVLSDGRI-WTGAEAKKVGLIDVVGGQEE 232 E ++ + D +T EA + G ID + + Sbjct: 149 YEEKSSLSREDIAKKMDEETYFTAQEALEAGFIDEIASYDT 189 >gi|37626162|gb|AAQ96537.1| putative protease [Vibrio phage VP16C] Length = 395 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 31/214 (14%) Query: 38 VARIAIRGQIEDS---------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 ARI ++G + + +L E I+ DDS + ++ SPGG A Sbjct: 53 TARINMQGVMTSTPDFFAMLFGGGNCLYCDLFEAIDAAENDDSIKRIEYAIDSPGGEAEG 112 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL--FQYPY 140 + I+ K KP V +++A S A I+ A+ S VG+IG + + P Sbjct: 113 AIKLGDKIRNAK--KPSTALVSTASSAAYLAASQADEIVAASRVSRVGNIGAVLSMRRPS 170 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD-VVDSSYHWFVRLVSESRNI 199 V + + P P + + +++++ +D ++ F + V++ R Sbjct: 171 TS-------VYVDVTSTDAPNKRPDP---ESEEGRRVIREQSLDPLHNMFAQAVADGRGT 220 Query: 200 PYDKTLV-LSDGRIWTGAEAKKVGLIDVVGGQEE 232 G A K+G+ID + E Sbjct: 221 TLSDVNQNFGRGGSLFAETALKMGMIDKILTAET 254 >gi|104641333|gb|ABF73019.1| plastid periplasmic serine protease IV protein precursor [Karenia brevis] Length = 461 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 50/226 (22%) Query: 52 ELIERIERISRDDSATALIVSL---SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 E+ +++ + D + +I+++ + G + R+++ ++ E+ Sbjct: 142 EVTLNLQKAAADPRISGVILNIKPLTCGWGKVS---ELVRSLKHFQSSGKFCMCYLEIMT 198 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF- 167 +++ A ++ + GV + ++ L K GV + + K+ Sbjct: 199 EKEAVVAAACGESYMPPSAYISLTGVSLKGQFLGDVLRKAGVEPQIQRIGAYKSAGDQLQ 258 Query: 168 -------------------------------------------SEVNPKAVQMMQDVVDS 184 + ++ Sbjct: 259 RGNMSTAQREVLNALADDVYEGMVCLLAELSNGTHSXEASADNRPYTEEEEAYVKANAQK 318 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 SY F + SR + + T ++ GR+WTG +AK GL+D +GG Sbjct: 319 SYTLFRDTAALSRGLAINATEAVAQGRVWTGRQAKGAGLVDALGGL 364 >gi|237738215|ref|ZP_04568696.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium mortiferum ATCC 9817] gi|229420095|gb|EEO35142.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium mortiferum ATCC 9817] Length = 361 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 93/255 (36%), Gaps = 51/255 (20%) Query: 30 HVEDNSPHVARIAIRGQI----------EDSQELIERIERISRDDSATALIVSLSSPGGS 79 +++ S V I + G I S +++ + + L + ++SPGG Sbjct: 10 EIKNISDDVGEIRVYGDICKWAWEEYGETSSVTFSKQLANL---KNVKKLELKINSPGGD 66 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + A++ I++ K V + MAASA +++ A+N +++G Y Sbjct: 67 VFEAVAMYHEIKRFAQGKEVTAYIDGMAASAATILTLAANK------TIMG----KGCYF 116 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + L +G + E+N +A++ + D+ + SR+ Sbjct: 117 MIHNPLMYMGYANV--------------EEMN-EAIEHLNKTKDNLLDLYEEKCKLSRDE 161 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ----------SLYALGVDQSIRKI 249 +K + +T EA + G ID + + L L + + ++ I Sbjct: 162 IAEKMDKTT---WYTAEEALQAGFIDEIANYDSSISNLNISNVFTPELKNLAIPEKLKDI 218 Query: 250 KDWNPPKNYWFCDLK 264 N + DLK Sbjct: 219 LQENKEEKMTLQDLK 233 >gi|145480043|ref|XP_001426044.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393116|emb|CAK58646.1| unnamed protein product [Paramecium tetraurelia] Length = 292 Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 92/269 (34%), Gaps = 15/269 (5%) Query: 35 SPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 V + I+G I ++ ++E S AL + ++S GG Y E + + I+ Sbjct: 11 QKTVLVLRIQGSINSQLVSKISHQLEN-YNKGSVIALGLIINSQGGCPYQVEVLSKKIKS 69 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 N P+ T E + Y + N A TS +G + FL G++ Sbjct: 70 YLNGLPLYTFATEQSLGNAYQLLQLGNKSYAQNTSKIGFTQMYKNKLNFADFLQNYGINT 129 Query: 153 KSVKSSP----MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 +SS S + + + + +R Sbjct: 130 FQYQSSQIVNHNFVVNSSIRGNSQQDMDYLDQYYGLKTKQVTDQCWTNRKEQIKINKDQL 189 Query: 209 DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 + ++ G EAK +GL+D +G E+V Y I +N WF +S Sbjct: 190 ENNVFLGKEAKDLGLVDELGTYEKVLMQQYPKAKIIPINTEGKLTEYEN-WFNLFIKISQ 248 Query: 269 SS-----LLEDTIPLMKQTKVQGLWAVWN 292 S +L + +M + + + VW Sbjct: 249 SRGFMGLVLLFGVKVMLKWGL--IIYVWR 275 >gi|251780299|ref|ZP_04823219.1| Clp protease family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084614|gb|EES50504.1| Clp protease family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 232 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 85/227 (37%), Gaps = 55/227 (24%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + ++I GQIE + +I ++ + ++D+ +++ L++ GG A Sbjct: 38 NKSIQVLSIIGQIEGHMVLPPQTKATRYEHIIPQLIDLEQNDNVKGVLIVLNTVGGDVEA 97 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGS-------IG 133 G AI I+ + KP ++ V S G ++ AS+ ++ +V IG Sbjct: 98 GLAIAEMIRSMS--KPTVSIVTGGGHSIGVPLATASDYSFITPSATMIVHPVRMNGFIIG 155 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V + Y K +++ + + + + + ++ + + Sbjct: 156 VAQTFEYFKKMQERI---NEFITRTSH---------IKEEELEKFMLQTNELLNDV---- 199 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I G +A + GLID VGG +E L L Sbjct: 200 ----------------GTILIGKQAVECGLIDEVGGIKEALAKLKEL 230 >gi|188589517|ref|YP_001920628.1| Clp protease [Clostridium botulinum E3 str. Alaska E43] gi|188499798|gb|ACD52934.1| Clp protease family protein [Clostridium botulinum E3 str. Alaska E43] Length = 232 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 85/227 (37%), Gaps = 55/227 (24%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + ++I GQIE + +I ++ + ++D+ +++ L++ GG A Sbjct: 38 NKSIQVLSIIGQIEGHMVLPPQTKATRYEHIIPQLIDLEQNDNVKGVLIVLNTVGGDVEA 97 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGS-------IG 133 G AI I+ + KP ++ V S G ++ AS+ ++ +V IG Sbjct: 98 GLAIAEMIRSMS--KPTVSIVTGGGHSIGVPLATASDYSFITPSATMIVHPVRMNGFIIG 155 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V + Y K +++ + + + + + ++ + + Sbjct: 156 VAQTFEYFKKMQERI---NEFITRTSH---------IKEEELEKFMLQTNELLNDV---- 199 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I G +A + GLID VGG +E L L Sbjct: 200 ----------------GTILIGKQAVECGLIDEVGGIKEALAKLKEL 230 >gi|297734122|emb|CBI15369.3| unnamed protein product [Vitis vinifera] Length = 302 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 84/231 (36%), Gaps = 19/231 (8%) Query: 35 SPHVARIAIRGQIEDS-----------QELIERIERISRDDSATALIVSLS--SPG-GSA 80 V + +RGQI D ++ E + + D + + + + S G G Sbjct: 24 KGSVFTMKLRGQISDQLKSRFSSGLSLPQICENFIKAAYDPRISGIYLHIEPLSCGWGKV 83 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 E I R I K I Y + A + + A ++ G+ Q + Sbjct: 84 ---EEIRRHILDFKKSGKFIVAYAPACGEKEYYLGSACDELYAPPSAYFSLYGLTVQASF 140 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSE--VNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +K+G+ + + K+ + ++ + +M+ ++D+ Y ++ +S ++ Sbjct: 141 LGGVFEKVGIEPQVQRIGKYKSAGDQLTRKTMSEENCEMLTALLDNIYGNWLDKISSAKG 200 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + T + ++ + K+ G I + +EV L + + Sbjct: 201 KKREDTENFINEGVYQVEKLKEEGWITNINYDDEVISILKERLGQPKDKNL 251 >gi|219850369|ref|YP_002464802.1| hypothetical protein Cagg_3527 [Chloroflexus aggregans DSM 9485] gi|219544628|gb|ACL26366.1| protein of unknown function DUF114 [Chloroflexus aggregans DSM 9485] Length = 275 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 39/223 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I+ RD + L +PGG A E I RA+++ + V V Sbjct: 67 IEDSEAVLRAIKMTDRDIPID---LILHTPGGLVLASEQIARALRRHPAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L Q+P L++ Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQHPAASILRVLERK--------------- 166 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVL----SDGRIWTG-- 215 P SE++ + + MM D+ + + V E S + +K + + G +WT Sbjct: 167 --PISEIDDETL-MMADIAEKAIRQVKHTVCELLSDKMSVEKAEEVAHTLASG-VWTHDY 222 Query: 216 ----AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EA+++GL EE++Q + R ++ P Sbjct: 223 PITVREARELGLPISTDMPEEIYQMMALYPQTAQRRPSVEYIP 265 >gi|310778837|ref|YP_003967170.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926] gi|309748160|gb|ADO82822.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926] Length = 360 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 36/214 (16%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK--PVITEV 103 + + + +E + +S + ++SPGGS AI+ +++ + T + Sbjct: 35 TVVTASDFARELEELKDTESIN---LCINSPGGSVTEAHAIYNMLKRYAKANNVKITTYI 91 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AASA I+ A + I +G V K Sbjct: 92 DGVAASAASYIAMAGDEICMG-------LGASLMIHNVNGG-----------AWGESKDL 133 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVG 222 + +++ + Y V++S N+ + L + W T EA + G Sbjct: 134 -----RKTADLMDKLKENIIDIY------VTQS-NLSREVISNLMNEETWMTPEEALEYG 181 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 ID + E + + I PP+ Sbjct: 182 FIDKIETYETISDDDIDNLFTREITNSIKALPPR 215 >gi|255524218|ref|ZP_05391177.1| peptidase S14 ClpP [Clostridium carboxidivorans P7] gi|296185339|ref|ZP_06853749.1| Clp protease [Clostridium carboxidivorans P7] gi|255512043|gb|EET88324.1| peptidase S14 ClpP [Clostridium carboxidivorans P7] gi|296050173|gb|EFG89597.1| Clp protease [Clostridium carboxidivorans P7] Length = 229 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 87/232 (37%), Gaps = 59/232 (25%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 E N + + I GQIE + +I ++ I D + L++ L++ GG Sbjct: 30 EKNKDKIQVLPIIGQIEGHMILPPQSKSTKYEHVIPQLINIENDQNIEGLLIVLNTVGGD 89 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-----------L 128 AG AI I+ + KP ++ V S G ++ A++ + ++ L Sbjct: 90 VEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATAADYSFISPSATMIIHPIRMNGL 147 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 V IGV + Y ++ ++ V++S +K + VQ + D + Sbjct: 148 V--IGVPQTFEYFNKMQER--ITEFIVRTSKIKR----------EQVQKLMVQTDELLND 193 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I G +A + GLID VGG + + L L Sbjct: 194 M--------------------GTILIGEQAVEAGLIDQVGGISDAIKKLNVL 225 >gi|153840620|ref|ZP_01993287.1| type IV pilin biogenesis peptidase, putative [Vibrio parahaemolyticus AQ3810] gi|149745716|gb|EDM56846.1| type IV pilin biogenesis peptidase, putative [Vibrio parahaemolyticus AQ3810] Length = 119 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + F E KA + ++ ++ F + E R P + ++ G W G +AK++ Sbjct: 1 RTLTMFGENTDKARDKFKQELEETHVLFKDFIRERR--PSLELEKVATGEHWFGTQAKEL 58 Query: 222 GLIDVVGGQEEVW 234 GL+D + +++ Sbjct: 59 GLVDEISTSDDLV 71 >gi|115351925|ref|YP_773764.1| peptidase S14, ClpP [Burkholderia ambifaria AMMD] gi|115281913|gb|ABI87430.1| peptidase S14, ClpP [Burkholderia ambifaria AMMD] Length = 361 Score = 82.1 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 35/181 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 D+Q + +++ + + S ++V+++S GG + AI+ A+++ + V V +A Sbjct: 33 TDAQTFVTQLDAAAANAST--IVVAINSMGGDVFDAFAIYNALRRHAGK--VKVRVDGVA 88 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 ASA LI+ A + IV E +L L + + +V + K Sbjct: 89 ASAASLIAMAGDEIVMPENAL------LMIH------------NAHTVTAGEAKD----- 125 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 ++ + D++D++ + + D+ + D W T A+AK+ G D Sbjct: 126 -------LRRIADLLDNAGDGILAAYAAKSGQSIDEIRGMMDAETWLTAAQAKEKGFCDT 178 Query: 227 V 227 + Sbjct: 179 I 179 >gi|37626097|gb|AAQ96473.1| putative protease [Vibrio phage VP16T] Length = 395 Score = 82.1 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 14/184 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ I DDS + + SPGG A + I+ +KP V +++A Sbjct: 83 DVFAAINAAESDDSVKNIEYYIDSPGGEAEGAIKLGDMIR--GTKKPSTAFVSTASSAAY 140 Query: 112 YLISCASNIIVA-AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 L + ++ IVA + S G+IG + ++ + + S +P K Sbjct: 141 -LAASQADKIVATSRVSRAGNIGAVLS---MRRPSQSSYIDVTS-TDAPNKRP----DPE 191 Query: 171 NPKAVQMMQDV-VDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVVG 228 + +++++ +D ++ F + V++ R G A K+G+ID + Sbjct: 192 TEEGRRVIREQALDPLHNMFAQAVADGRGTTLADVNQNFGRGGSLFAETALKMGMIDEIL 251 Query: 229 GQEE 232 E Sbjct: 252 TAET 255 >gi|163848542|ref|YP_001636586.1| hypothetical protein Caur_2998 [Chloroflexus aurantiacus J-10-fl] gi|222526476|ref|YP_002570947.1| hypothetical protein Chy400_3243 [Chloroflexus sp. Y-400-fl] gi|163669831|gb|ABY36197.1| protein of unknown function DUF114 [Chloroflexus aurantiacus J-10-fl] gi|222450355|gb|ACM54621.1| protein of unknown function DUF114 [Chloroflexus sp. Y-400-fl] Length = 274 Score = 82.1 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 39/223 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I+ RD + L +PGG A E I RA+ K + V V Sbjct: 67 IEDSEAVLRAIKMTDRDIPID---LILHTPGGLVLAAEQIARALTKHAAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPF--LDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L Q+P L++ Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQHPAASILSVLERK--------------- 166 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVL----SDGRIWTG-- 215 P SE++ + + MM D+ + + R V E +P ++ + + G +WT Sbjct: 167 --PLSEIDDETL-MMADIAEKAIRQVKRTVCELLRDKMPVERAEEVAHTLASG-VWTHDY 222 Query: 216 ----AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +EA+++GL EE++Q + R ++ P Sbjct: 223 PITVSEARELGLPISTEVPEEIYQIMALYPQTAQRRPSVEYIP 265 >gi|187933709|ref|YP_001885481.1| Clp protease [Clostridium botulinum B str. Eklund 17B] gi|187721862|gb|ACD23083.1| Clp protease family protein [Clostridium botulinum B str. Eklund 17B] Length = 232 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 84/227 (37%), Gaps = 55/227 (24%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + ++I GQIE + +I ++ + ++D+ +++ L++ GG A Sbjct: 38 NKSIQVLSIIGQIEGHMVLPPQTKATRYEHIIPQLIDLEQNDNVKGILIVLNTVGGDVEA 97 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGS-------IG 133 G AI I+ + KP ++ V S G ++ AS+ ++ +V IG Sbjct: 98 GLAIAEMIRSMS--KPTVSIVTGGGHSIGVPLATASDYSFITPSATMIVHPVRMNGFIIG 155 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V + Y K +++ + + + + + ++ + + Sbjct: 156 VAQTFEYFKKMQERI---NEFITRTSH---------IKEEELEKFMLQTNELLNDV---- 199 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I G +A GLID VGG +E L L Sbjct: 200 ----------------GTILIGKQAVDCGLIDEVGGIKEALSKLKEL 230 >gi|297734120|emb|CBI15367.3| unnamed protein product [Vitis vinifera] Length = 150 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 1/118 (0%) Query: 139 PYVKPFLDKLGVSIKSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + +K+G + + + + P ++ ++Y F + SR Sbjct: 23 FNLGTLNEKIGFNKEIISRGRFAELTAAELRPFRPDEAELFAKSAWNAYKQFRDKTAFSR 82 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 ++ DK + GR+WTG +A GL+D +GG + + P Sbjct: 83 SMAVDKMEEKAQGRVWTGKDAASRGLVDAIGGLSRAVAIAKQKANIPQDAPVGSYVYP 140 >gi|255017492|ref|ZP_05289618.1| hypothetical protein LmonF_06458 [Listeria monocytogenes FSL F2-515] Length = 112 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 48/98 (48%) Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 SY+ FV++V++ R + ++ ++DGRI+ G +AK+ GLID G QE+ ++L Sbjct: 1 SYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALEALKKEQGLA 60 Query: 245 SIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 I+ P + IS D L+K T Sbjct: 61 GATVIQYDAPGDFSSLFSVAAQKISGQNADISQLIKLT 98 >gi|56963436|ref|YP_175167.1| hypothetical protein ABC1671 [Bacillus clausii KSM-K16] gi|56909679|dbj|BAD64206.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 454 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 3/139 (2%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDD 64 K +K V L + + + ++ + + + I I +E + +ER + ++ Sbjct: 3 KWMKFALVSWLLACVLLPFQVLANQADSKNASIYVIPIEQTVERGLEAFLERSFSEAEEN 62 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A +I+++++PGG+ A I I PV ++ A SAG I+ ++ I+ Sbjct: 63 GADHIILNINTPGGAVDAAGHIANIIN--STDIPVTAFINSEAISAGAYIALNADEIIMV 120 Query: 125 ETSLVGSIGVLFQYPYVKP 143 +GS GV+ Sbjct: 121 PNGQIGSAGVIDGAGNAAE 139 >gi|227485897|ref|ZP_03916213.1| peptidase S14, ClpP [Anaerococcus lactolyticus ATCC 51172] gi|227236130|gb|EEI86145.1| peptidase S14, ClpP [Anaerococcus lactolyticus ATCC 51172] Length = 380 Score = 80.2 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 41/239 (17%) Query: 38 VARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +A + I G I D + E + LI+ ++S GG +A AI+ Sbjct: 19 IAEVTIYGNISDKIDWELGEINPEFFSSDLAYLEQEDINTLIIRINSAGGDVFAATAIYS 78 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ K +K I ++ AASA +I+ A + I A GS+ + ++ + + Sbjct: 79 RLKEFKAKK--IVKIDGWAASAATIIAMAGDEIEIAPN---GSLMIHDPLFGLEGYFNAK 133 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + ++ ++ + ++Y ++ L Sbjct: 134 DLIKYI------------------EQLETIKKSIINAY-------KTKTGKTEEELAQLM 168 Query: 209 DGRIW-TGAEAKKVGLIDVVGGQE-EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 + W TG EA G D + +E +V + + + D+ N +N Sbjct: 169 EAETWYTGQEAVDAGFCDRLMFEEADVAATADGQIKVNGVLMVSDFKNLPNTVLDHSQN 227 >gi|294501296|ref|YP_003564996.1| hypothetical protein BMQ_4558 [Bacillus megaterium QM B1551] gi|294351233|gb|ADE71562.1| putative membrane protein [Bacillus megaterium QM B1551] Length = 443 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 7/142 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDS 65 +KT + + + L F S + H I + +E+ L IE +D Sbjct: 1 MKTLFSFVCFLILATGLFPTISTADVKRVH--VIPVNKTVENGLLSFLNRSIEDA-ENDG 57 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A +I+ + +PGG+ A I +++ P V + A SAG I+ ++ I Sbjct: 58 ADLIILDIDTPGGAVDAASEIAKSL--TSTPIPTAAFVDKKALSAGAYIALNADQIYMTP 115 Query: 126 TSLVGSIGVLFQYPYVKPFLDK 147 S +GS V+ Q+ + Sbjct: 116 GSTMGSAAVIDQHGNAAGKKAQ 137 >gi|212224654|ref|YP_002307890.1| hypothetical protein TON_1503 [Thermococcus onnurineus NA1] gi|212009611|gb|ACJ16993.1| Hypothetical protein TON_1503 [Thermococcus onnurineus NA1] Length = 280 Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 23/216 (10%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I RA++ VI Sbjct: 73 SIEDSEEILRAIRMAPKDKPID---LIIHTPGGLVLAATQIARALKDHPAETRVIV--PH 127 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ +++G + L QYP + K P K + Sbjct: 128 YAMSGGTLIALAADKIIMDPHAVLGPVDPQLGQYPGPS-------IVRAVEKKGPDKVD- 179 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AEA 218 + A + ++ V D + E + + L++GR WT A Sbjct: 180 DQTLILADVAEKAIKQVRDLVFDLLKDRYGEEKAKELAQI--LTEGR-WTHDYPITYEHA 236 Query: 219 KKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 K++GL G EEV+ + R ++ P Sbjct: 237 KELGLHVETGVPEEVYALMELYKQPMKQRGTVEFMP 272 >gi|229828941|ref|ZP_04455010.1| hypothetical protein GCWU000342_01026 [Shuttleworthia satelles DSM 14600] gi|229792104|gb|EEP28218.1| hypothetical protein GCWU000342_01026 [Shuttleworthia satelles DSM 14600] Length = 224 Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 54/213 (25%) Query: 35 SPHVARIAIRGQIEDSQE----------------LIERIERISRDDSATALIVSLSSPGG 78 VA+I I+G I +E ++ ++E S + + + ++S GG Sbjct: 7 EEKVAKIEIKGAIVPDEEAWIYEYFGEKCTSPSAVLRQLEEASGEK----VDIDINSAGG 62 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + +A I+ AIQ K + +AASA +I+CA Sbjct: 63 NVFAASEIYAAIQGYKGDVKIHVV--GLAASAASMIACAGK------------------- 101 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + ++ + + + + + + V S Sbjct: 102 SDITRTAQMMVHNVSAYTAGDYRDMNHASEVLKQANRAIAEAYVAKS------------G 149 Query: 199 IPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 + L L D W T +A GLID + G+ Sbjct: 150 MSEKDALDLMDAETWITAQDAVDYGLIDEIAGE 182 >gi|330939422|gb|EGH42779.1| peptidase S49 [Pseudomonas syringae pv. pisi str. 1704B] Length = 264 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS--S 158 V ASA Y ++ A++ IV ET+L+GSI V G + S + Sbjct: 2 AYVGGTGASAAYWLASAASEIVIDETALLGSI--GVVVEAVVEGEASSGRKRYQIVSRNA 59 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE 217 P K + + + VD+ FV V+ + + D + D G + GA Sbjct: 60 PNKR----LDMATEEGRAKVGETVDAMGEVFVAKVARNLGVASDAVPAMGDFGGLRVGAA 115 Query: 218 AKKVGLIDVVGGQEEVWQSLYA 239 A + GL +G E + L Sbjct: 116 AVESGLAHRLGSLEGLITELAK 137 >gi|167725633|ref|ZP_02408869.1| peptidase S14, ClpP [Burkholderia pseudomallei DM98] Length = 366 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 39/211 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + S VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGSGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVVGG 229 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVIET 183 >gi|169841767|ref|ZP_02874876.1| Protease IV [candidate division TM7 single-cell isolate TM7a] Length = 75 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%) Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 F+ ++ ++ + + +Y F VS+SR I + + G+IW G EA Sbjct: 1 KYSDINDSFAPLSQESRDKITQSMQETYSEFKSRVSKSRKIDENTLENYAQGKIWLGDEA 60 Query: 219 KKVGLIDVVGGQEEV 233 K + L+D + +EV Sbjct: 61 KNINLVDGIASLDEV 75 >gi|313677301|ref|YP_004055297.1| hypothetical protein Ftrac_3215 [Marivirga tractuosa DSM 4126] gi|312943999|gb|ADR23189.1| protein of unknown function DUF107 [Marivirga tractuosa DSM 4126] Length = 461 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDS 65 ++ + V L+ L ++ FS + D V + I+ QI+ + +E + +++ + Sbjct: 11 RMHMKRVAFILLLLGIIQFSIFADSTDVKQEVFIMEIKDQIDVRTNRYVELALQEAKERN 70 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 ++ +++ +++ GG+ Y + I A+ + PV + AASAG LIS A + I A Sbjct: 71 SSHILIEMNTYGGALYDADEIRSALLNL--DIPVYVFIDNNAASAGALISIACDSIYMAP 128 Query: 126 TSLVGSIG 133 GSIG Sbjct: 129 G---GSIG 133 >gi|15668307|ref|NP_247103.1| hypothetical protein MJ_0137 [Methanocaldococcus jannaschii DSM 2661] gi|2495823|sp|Q57601|Y137_METJA RecName: Full=Uncharacterized protein MJ0137 gi|1592268|gb|AAB98120.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 286 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 29/219 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 77 TIEDSEEILRAIRAAPKDKPID---LIIHTPGGLVLAATQIAKALKAHPAETRVIV--PH 131 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQY--PYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G + L QY P + +++ G + Sbjct: 132 YAMSGGTLIALAADKIIMDENAVLGPVDPQLGQYPAPSIVKAVEQKG--------ADKAD 183 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------A 216 + + + A + + V + Y+ E + K L++GR WT Sbjct: 184 DQTLI--LADIAKKAINQVQNFVYNLLKDKYGEEKAKELSKI--LTEGR-WTHDYPITVE 238 Query: 217 EAKKVGL-IDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EAK++GL +D EEV+ + R ++ P Sbjct: 239 EAKELGLDVD-TNVPEEVYTLMELYKQPVRQRGTVEFMP 276 >gi|212224206|ref|YP_002307442.1| nodulation protein nfeD [Thermococcus onnurineus NA1] gi|212009163|gb|ACJ16545.1| nodulation protein nfeD [Thermococcus onnurineus NA1] Length = 441 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDS 65 +K + V++ L+ F S+H + N+ +VA+I G I + I + + Sbjct: 1 MKLKIVLIVLILFVT--FFPSAHAQGNTVYVAKID--GMITGYTVDQFDRYISEAEKA-N 55 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIV 122 A+A+I+ L++PGG A A + I IQ K PVI V MAASAG I+ S++I Sbjct: 56 ASAIIIELNTPGGRADAMQEIVMRIQNAK--VPVIIYVYPSGGMAASAGTYIALGSHLIA 113 Query: 123 AAETSLVGSIGVLFQY 138 A +++G+ + Y Sbjct: 114 MAPGTVIGACRPILGY 129 >gi|295706643|ref|YP_003599718.1| hypothetical protein BMD_4544 [Bacillus megaterium DSM 319] gi|294804302|gb|ADF41368.1| putative membrane protein [Bacillus megaterium DSM 319] Length = 443 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 7/142 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDS 65 +KT + + + L F S + H I + +E+ L IE +D Sbjct: 1 MKTLFSFVCFLILATGLFPTISTADVKRVH--VIPVNKTVENGLLSFLNRSIEEA-ENDG 57 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A +I+ + +PGG+ A I +++ P V + A SAG I+ ++ I Sbjct: 58 ADLIILDIDTPGGAVDAASEIAKSL--TSTPIPTAAFVDKKALSAGAYIALNADQIYMTP 115 Query: 126 TSLVGSIGVLFQYPYVKPFLDK 147 S +GS V+ Q + Sbjct: 116 GSTMGSAAVIDQQGNAAGKKAQ 137 >gi|238786162|ref|ZP_04630114.1| Protease 4 [Yersinia bercovieri ATCC 43970] gi|238712931|gb|EEQ04991.1| Protease 4 [Yersinia bercovieri ATCC 43970] Length = 294 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAG-EAIFRAIQKVKNR-KPVITEVHEMAAS 109 +++E I D++ +++SLS G+ + I +A+++ ++ KP+ + + Sbjct: 79 DVVETIRLAKTDNNINGIVLSLSDFTGADQPSLQYIGKALREFRDSGKPIYA-IGDSYNQ 137 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF-- 167 Y ++ +N I + V G Y K L+KL V+ + K+ P Sbjct: 138 NQYYLASFANKIYLSPQGAVDLHGFASNNLYYKSLLEKLKVTTNIFRVGTFKSAVEPMIR 197 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE---------A 218 +++P A + + + ++ V+ +R + ++ + + +G + A Sbjct: 198 DDMSPAAREADSRWIGGLWQNYLTAVAANRQLTAEQLFPGA-AAVISGLQAAGGSAAKYA 256 Query: 219 KKVGLIDVVGGQEEVWQSLYA 239 L+D + + EV L Sbjct: 257 LDNKLVDQLASRPEVESELIK 277 >gi|289192055|ref|YP_003457996.1| protein of unknown function DUF114 [Methanocaldococcus sp. FS406-22] gi|288938505|gb|ADC69260.1| protein of unknown function DUF114 [Methanocaldococcus sp. FS406-22] Length = 281 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 29/219 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 72 TIEDSEEILRAIRTAPKDKPID---LIIHTPGGLVLAATQIAKALKAHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQY--PYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G + L QY P + +++ GV Sbjct: 127 YAMSGGTLIALAADKIIMDENAVLGPVDPQLGQYPAPSIVKAVEQKGVDKV--------D 178 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------A 216 + + + A + + V + Y E + + L++GR WT Sbjct: 179 DQTLI--LADIAKKAINQVQNFVYSLLKDKYGEE--KAKELSKTLTEGR-WTHDYPITVE 233 Query: 217 EAKKVGL-IDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EAKK+GL +D EEV+ + R ++ P Sbjct: 234 EAKKLGLDVD-TNVPEEVYMLMELYKQPVRQRGTVEFMP 271 >gi|313123951|ref|YP_004034210.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280514|gb|ADQ61233.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 244 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 46/247 (18%) Query: 41 IAIRGQIEDS-----QELIERIERISRD-DSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 I I G+I S Q + + + + + ++SPGG + G AI+ +++ K Sbjct: 19 IDIEGEITSSVYNETQTSASQFRDLLKQIGDVKTINLHINSPGGDVFEGVAIYNMLKQSK 78 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + +AAS +I+ A N I+ E S+ L + + + Sbjct: 79 AD--INVYIDGLAASIASVIAMAGNTIIMPENSM------LMIH------------NPWT 118 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + K ++ + M + + +SY + + D L D W Sbjct: 119 IAQGNSKE----LRKI-ADDMDKMSESIKTSYLS-----KSNDKLDLDTLNQLMDEETWL 168 Query: 214 TGAEAKKVGLIDVV---------GGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLK 264 T EA + GL D V +E+ +A ++ +K P W +K Sbjct: 169 TAKEATEYGLADEVLEPVKMVACLTEEQAKSFKHAPEALVTVHPLKAEKAPDESWRQKVK 228 Query: 265 NLSISSL 271 L+ S+ Sbjct: 229 LLAQESM 235 >gi|167744552|ref|ZP_02417326.1| peptidase S14, ClpP [Burkholderia pseudomallei 14] Length = 366 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|167814835|ref|ZP_02446515.1| peptidase S14, ClpP [Burkholderia pseudomallei 91] gi|167911620|ref|ZP_02498711.1| peptidase S14, ClpP [Burkholderia pseudomallei 112] Length = 366 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|301300713|ref|ZP_07206898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851651|gb|EFK79350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus salivarius ACS-116-V-Col5a] Length = 234 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 76/214 (35%), Gaps = 37/214 (17%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERI-SRDD-----SATALIVSLSSPGGSAYAGE 84 + ++ I+I G+I + E I +DD + + ++SPGGS + G Sbjct: 1 MSKTQDNIGEISIYGEIVSEKWFDEEISATSFKDDLDDLGDVKTINLHINSPGGSVFEGI 60 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI ++ K + + V +AAS +I+ + + I E S+ L + Sbjct: 61 AIHNMLKMHKAK--INVYVDGLAASIASVIAMSGDTIFMPENSM------LMIH------ 106 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + +V K + ++ Q V + + I + Sbjct: 107 ------NPWTVAMGNSKE----LRKQADDLDRIAQMSVKTYLS------KSNGKIDEETL 150 Query: 205 LVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + L D W + EA GL D V + SL Sbjct: 151 VKLLDEETWLSAQEAVDYGLADEVLESNKAVASL 184 >gi|90961762|ref|YP_535678.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus phage Sal1] gi|90820956|gb|ABD99595.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus phage Sal1] Length = 249 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 76/215 (35%), Gaps = 37/215 (17%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELIERIERI-SRDD-----SATALIVSLSSPGGSAYAG 83 + ++ I+I G+I + E I +DD + + ++SPGGS + G Sbjct: 15 KMSKTQDNIGEISIYGEIVSEKWFDEEISATSFKDDLDDLGDVKTINLHINSPGGSVFEG 74 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 AI ++ K + + V +AAS +I+ + + I E S+ L + Sbjct: 75 IAIHNMLKMNKAK--INVYVDGLAASIASVIAMSGDTIFMPENSM------LMIH----- 121 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 + +V K + ++ Q V + + I + Sbjct: 122 -------NPWTVAMGNSKE----LRKQADDLDRIAQASVKTYLS------KSNGKIDEET 164 Query: 204 TLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + L D W + EA GL D V + SL Sbjct: 165 LVKLLDEETWLSAQEAVDYGLADEVLESNKAVASL 199 >gi|46199413|ref|YP_005080.1| periplasmic serine protease [Thermus thermophilus HB27] gi|46197038|gb|AAS81453.1| periplasmic serine protease [Thermus thermophilus HB27] Length = 275 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 39/192 (20%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D + + + L +PGG A E I A+ +++ V V Sbjct: 68 IDDSEQVLRAIR--LTDKNVP-IDLILHTPGGLVLAAEQIAEAL--LRHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L QYP L+K Sbjct: 123 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQYPAASIVKVLEKK--------------- 167 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLS----DGRIWTG-- 215 P SE++ + + ++ DV + + V +++P +K ++ G WT Sbjct: 168 --PLSEIDDQTL-ILADVAEKALRQVKTTVKNLLKKHMPEEKAEEVATLLSQG-TWTHDY 223 Query: 216 ----AEAKKVGL 223 +A+ +GL Sbjct: 224 PIDVEQARSLGL 235 >gi|55981444|ref|YP_144741.1| hypothetical protein TTHA1475 [Thermus thermophilus HB8] gi|55772857|dbj|BAD71298.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 275 Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 39/192 (20%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D + + + L +PGG A E I A+ +++ V V Sbjct: 68 IDDSEQVLRAIR--LTDKNVP-IDLILHTPGGLVLAAEQIAEAL--LRHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L QYP L+K Sbjct: 123 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQYPAASIVKVLEKK--------------- 167 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLS----DGRIWTG-- 215 P SE++ + + ++ DV + + V +++P +K ++ G WT Sbjct: 168 --PLSEIDDQTL-ILADVAEKALRQVKTTVKNLLKKHMPEEKAEEVATLLSQG-TWTHDY 223 Query: 216 ----AEAKKVGL 223 +A+ +GL Sbjct: 224 PIDVEQARSLGL 235 >gi|167619474|ref|ZP_02388105.1| peptidase S14, ClpP [Burkholderia thailandensis Bt4] Length = 366 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQVGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|323484093|ref|ZP_08089463.1| ATP-dependent Clp protease [Clostridium symbiosum WAL-14163] gi|323402535|gb|EGA94863.1| ATP-dependent Clp protease [Clostridium symbiosum WAL-14163] Length = 236 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 82/210 (39%), Gaps = 39/210 (18%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + G+I D E+ ++ + A + V ++SPGG +A I+ + + K Sbjct: 19 LVLNGEISDETWFGDEVTPKLFEKELNAGAGDVTVWINSPGGDVFAAAQIYNMLMEYKGD 78 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V +V +AASA +I+ A ++ + +G++ + P +G S + K Sbjct: 79 --VTVKVDALAASAASVIAMAGTSVLISP------VGMMMIH---NPMTIAIGDSKEMQK 127 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 + M E +++ + ++Y + + L D W Sbjct: 128 AGEMLDE--------------VKESIMNAYEI-------KTGLSRARISHLMDAESWFNA 166 Query: 216 AEAKKVGLIDVV--GGQEEVWQSLYALGVD 243 +A ++G D + GG E+ +G + Sbjct: 167 KKAVELGFADGILGGGLEKTEDMADGIGAE 196 >gi|240103959|ref|YP_002960268.1| Membrane bound protease, putative, nfeD/ClpP- family (nfeD) [Thermococcus gammatolerans EJ3] gi|239911513|gb|ACS34404.1| Membrane bound protease, putative, nfeD/ClpP- family (nfeD) [Thermococcus gammatolerans EJ3] Length = 454 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSA 66 +KTR + S + V+ + N V G I S + R I+ ++A Sbjct: 3 MKTRTLSRSAFIILVLMLLPAVLASPNQKTVYVAKFEGVITSYSVDQFSRYIEIAEKNNA 62 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV---HEMAASAGYLISCASNIIV 122 ALI+ + +PGGS A + I IQ++K K PVI V +AASAG I+ S++I Sbjct: 63 EALIIEIDTPGGSGQAMQEI---IQRIKESKVPVIIYVYPPGAIAASAGTYIALGSHLIA 119 Query: 123 AAETSLVGSIGVLFQY 138 A ++ +G+ + Y Sbjct: 120 MAPSTSIGACEPIMGY 135 >gi|326532262|dbj|BAK05060.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 169 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 37/83 (44%) Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + P ++ + ++Y F + SR++ D+ + GR+W+G +A GL+D + Sbjct: 12 RPLRPDEAELFEKSAQNAYASFRDKAAMSRSMGIDQMENFAQGRVWSGQDAASRGLVDSL 71 Query: 228 GGQEEVWQSLYALGVDQSIRKIK 250 GG + +K++ Sbjct: 72 GGFSQALAIAKQRAKIPQDKKVR 94 >gi|206900534|ref|YP_002251048.1| periplasmic serine protease [Dictyoglomus thermophilum H-6-12] gi|206739637|gb|ACI18695.1| periplasmic serine protease [Dictyoglomus thermophilum H-6-12] Length = 281 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 35/221 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I D + L +PGG A E I A++ K + V V Sbjct: 67 IEDSEEVLRAIRLTPEDMPID---LILHTPGGLVLAAEQIAHALKNHKGK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G I+ A++ IV E +++G + L +YP ++K GV K+ Sbjct: 122 AMSGGTFIALAADEIVMDENAVLGPVDPQLGEYPAASILNAINKKGVEKVEDKT------ 175 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIWTG---- 215 +V KA++ +++ V + +K ++ G WT Sbjct: 176 -LILGDVAEKAIRQVKESVFELLKD---------KMSEEKAKEIAEILSTG-TWTHDYPI 224 Query: 216 --AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EA+K+GL VG +E++ + R + P Sbjct: 225 TVEEAQKLGLPVKVGLPKEIYALMSLYPQSPGTRPSVQYIP 265 >gi|134277934|ref|ZP_01764649.1| Clp protease domain protein [Burkholderia pseudomallei 305] gi|134251584|gb|EBA51663.1| Clp protease domain protein [Burkholderia pseudomallei 305] Length = 359 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|254298353|ref|ZP_04965805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia pseudomallei 406e] gi|157808321|gb|EDO85491.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia pseudomallei 406e] Length = 366 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDVVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRHAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|237812956|ref|YP_002897407.1| peptidase S14, ClpP [Burkholderia pseudomallei MSHR346] gi|237505260|gb|ACQ97578.1| peptidase S14, ClpP [Burkholderia pseudomallei MSHR346] Length = 366 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ ++ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + + + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYARRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|260890124|ref|ZP_05901387.1| hypothetical protein GCWU000323_01286 [Leptotrichia hofstadii F0254] gi|260860147|gb|EEX74647.1| protease IV [Leptotrichia hofstadii F0254] Length = 286 Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 111/261 (42%), Gaps = 33/261 (12%) Query: 1 MEFVLKKIKTRYVMLSL-VTLTVVYF------------------SWSSHVEDNSPHVARI 41 M F+LK + +ML L V L ++ + V+ VA Sbjct: 1 MMFILKMLLEIVIMLILCVILNLILVKKILRVKNKKKLPLKKIKTVVFDVKKLKEDVAMP 60 Query: 42 AIRG-QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 A++G + ++++ + ++ D + +I+ + + E I + K+K K V+ Sbjct: 61 ALKGKEKLSYYQILQGLNNLAEDKNIKKVIIDVDKLNLTLSQLEEISKIFDKIKKNKEVV 120 Query: 101 TEVHEMAASAGYLISCASNIIVA---AETSLVGSI--GVLFQYPYVKPFLDKLGVSIKSV 155 + + + Y + ++ I ++++ I G L + Y+K FL+K G+ + + Sbjct: 121 A-IGTLFEESRYREALLADKIFMFDTRQSTI---IFRGYLHKEFYLKSFLEKFGIRMNVL 176 Query: 156 KSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 K +S +++ + + ++++ D + FV LV R + + +LS I+ Sbjct: 177 HIGDYKVAGEKYSHNQMSEEKKESIKNIKDKVFEDFVELVKSKRGVDIEN-EILSGNLIF 235 Query: 214 TG-AEAKKVGLIDVVGGQEEV 233 G +A + LID V +E+ Sbjct: 236 AGKKKALEYKLIDGVADYDEI 256 >gi|167893326|ref|ZP_02480728.1| peptidase S14, ClpP [Burkholderia pseudomallei 7894] Length = 358 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ I+ D S ++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAIATDAS--SITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + +++D++ + ++ + Sbjct: 116 -----------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|254519174|ref|ZP_05131230.1| peptidase S14 [Clostridium sp. 7_2_43FAA] gi|226912923|gb|EEH98124.1| peptidase S14 [Clostridium sp. 7_2_43FAA] Length = 246 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 61/235 (25%) Query: 38 VARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + I GQIE Q +I ++ + R+D+ +++ L++ GG AG A Sbjct: 47 IQILPIIGQIEGHQVLPAQSKSTKYEHVIPQLIAMERNDNVKGVLIILNTVGGDVEAGLA 106 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV--------G-SIGVLF 136 I I + KP ++ V S G ++ +S+ ++ + G IGV Sbjct: 107 IAEMINSLS--KPTVSIVIGGGHSIGVPLATSSSYSFITPSATMIVHPIRMNGFVIGVAQ 164 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM---QDVVDSSYHWFVRLV 193 + Y + ++ + V++S +K + QMM ++++ Sbjct: 165 TFNYFQKMQER--IDNFIVRTSKIK---------KDELRQMMLKSDELLNDM-------- 205 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G I G +A + GLID GG ++ L L ++ +K Sbjct: 206 ----------------GTILIGKQAVECGLIDEEGGIKDALNKLKELIGEKESKK 244 >gi|300214522|gb|ADJ78938.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus salivarius CECT 5713] Length = 234 Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 76/214 (35%), Gaps = 37/214 (17%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERI-SRDD-----SATALIVSLSSPGGSAYAGE 84 + ++ I+I G+I + E I +DD + + ++SPGGS + G Sbjct: 1 MSKTQDNIGEISIYGEIVSEKWFDEEISATSFKDDLDDLGDVKTINLHINSPGGSVFEGI 60 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI ++ K + + V +AAS +I+ + + I E S+ L + Sbjct: 61 AIHNMLKMNKAK--INVYVDGLAASIASVIAMSGDTIFMPENSM------LMIH------ 106 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + +V K + ++ Q V + + I + Sbjct: 107 ------NPWTVAMGNSKE----LRKQADDLDRIAQASVKTYLS------KSNGKIDEETL 150 Query: 205 LVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + L D W + EA GL D V + SL Sbjct: 151 VKLLDEETWLSAQEAVDYGLADEVLESNKAVASL 184 >gi|218297188|ref|ZP_03497850.1| protein of unknown function DUF114 [Thermus aquaticus Y51MC23] gi|218242465|gb|EED09004.1| protein of unknown function DUF114 [Thermus aquaticus Y51MC23] Length = 278 Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 39/192 (20%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D + + + L +PGG A E I A+ +++ V V Sbjct: 68 IDDSEQVLRAIR--LTDKNVP-IDLVLHTPGGLVLAAEQIAEAL--LRHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L QYP L+K Sbjct: 123 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQYPAASVLKVLEKK--------------- 167 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLS----DGRIWTG-- 215 P E++ + + ++ DV + + V +++P D+ ++ G WT Sbjct: 168 --PIQEIDDQTL-ILADVAEKALKQVKATVKNLLKKHMPEDRAEEVAHILSQG-TWTHDY 223 Query: 216 ----AEAKKVGL 223 A+A+++GL Sbjct: 224 PIDVAQARELGL 235 >gi|18310659|ref|NP_562593.1| Clp protease [Clostridium perfringens str. 13] gi|18145340|dbj|BAB81383.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 247 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 92/240 (38%), Gaps = 59/240 (24%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 + ++ + I GQIE + +I ++ I ++D ++ L++ GG Sbjct: 44 KKEDSNIQVLTIIGQIEGHSVQPPQTKTTKYEHMIPQLIDIEQNDRIKGILFVLNTVGGD 103 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-----------L 128 AG AI I+ +K KP ++ V S G ++ AS + ++ L Sbjct: 104 VEAGLAIAEMIRSLK--KPTVSLVIGGGHSIGVPLATASQYSFISPSATMIIHPIRMNGL 161 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 V IGV + Y ++ ++ +++S +K ++ + +++ D+ Sbjct: 162 V--IGVPQTFNYFNKMQER--INDFIIRTSEIK--LDVLKKMMMQTDELLNDM------- 208 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G I G EA K GLI+ VGG +E L +L ++ Sbjct: 209 ---------------------GTILVGEEAVKCGLINEVGGVKEALDKLNSLIEAYNVEP 247 >gi|9633042|ref|NP_050150.1| ClpP-like protease [Lactobacillus phage phiadh] gi|5730299|emb|CAB52520.1| ClpP-like protease [Lactobacillus phage phiadh] Length = 242 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 38/209 (18%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 + I++ + + + + + ++SPGG AG I+ A+++ + + VI ++ A SA I Sbjct: 33 KAIKQALNEANGSDVTLEINSPGGYVDAGSEIYTALKEYQGQ--VIAKITGQACSAASWI 90 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A++ I + T+ + + ++ S + +N Sbjct: 91 ALAADRIEMSPTA------QMMIH------------RASTISIGNSDDLASDLNALN--- 129 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEV 233 +D S FV L S+ + + L W EA G D + Q + Sbjct: 130 ------SLDKS---FVDLYSQRTGLDAQEVYRLMCNTTWMNAKEAVDKGFADEIMFQNDK 180 Query: 234 WQSLYALGVDQSIR-----KIKDWNPPKN 257 +L S++ KIK+ K+ Sbjct: 181 KPALVNADGSLSVKPDMINKIKNLLHKKS 209 >gi|323953618|gb|EGB49480.1| peptidase S49 [Escherichia coli H263] Length = 174 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 1/102 (0%) Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + L + GV I + S K + + F + + Q MQ +D++ F V+ Sbjct: 1 SHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARRMFAEKVAMF 60 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 + D ++ ++ G + GL D + + + Sbjct: 61 TGLSVDAVTG-TEAAVFEGQSGIEAGLADELINASDAISVMA 101 >gi|167824886|ref|ZP_02456357.1| peptidase S14, ClpP [Burkholderia pseudomallei 9] gi|226198878|ref|ZP_03794441.1| peptidase S14, ClpP [Burkholderia pseudomallei Pakistan 9] gi|225928978|gb|EEH25002.1| peptidase S14, ClpP [Burkholderia pseudomallei Pakistan 9] Length = 364 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 39/206 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 W + VA I I I D+Q + +++ ++ D S ++ V+++S GG + Sbjct: 8 WDIRAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADAS--SITVAINSMGGDVFD 65 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 66 AFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH---- 113 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 +V + K ++ + +++D++ + ++ + D Sbjct: 114 --------HPHTVAAGESKD------------LRRVAELLDNASAGILAAYAQRSGLSED 153 Query: 203 KTLVLSDGRIW-TGAEAKKVGLIDVV 227 + D W T A+AK+ G DV+ Sbjct: 154 DVRAMMDAETWLTAAQAKEKGFCDVI 179 >gi|110799331|ref|YP_696364.1| Clp protease [Clostridium perfringens ATCC 13124] gi|168211435|ref|ZP_02637060.1| clp protease [Clostridium perfringens B str. ATCC 3626] gi|168214490|ref|ZP_02640115.1| clp protease [Clostridium perfringens CPE str. F4969] gi|168216964|ref|ZP_02642589.1| clp protease [Clostridium perfringens NCTC 8239] gi|182626367|ref|ZP_02954121.1| clp protease [Clostridium perfringens D str. JGS1721] gi|110673978|gb|ABG82965.1| clp protease [Clostridium perfringens ATCC 13124] gi|170710555|gb|EDT22737.1| clp protease [Clostridium perfringens B str. ATCC 3626] gi|170714034|gb|EDT26216.1| clp protease [Clostridium perfringens CPE str. F4969] gi|177908318|gb|EDT70866.1| clp protease [Clostridium perfringens D str. JGS1721] gi|182380948|gb|EDT78427.1| clp protease [Clostridium perfringens NCTC 8239] Length = 229 Score = 75.6 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 92/240 (38%), Gaps = 59/240 (24%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 + ++ + I GQIE + +I ++ I ++D ++ L++ GG Sbjct: 26 KKEDSNIQVLTIIGQIEGHSVQPPQTKTTKYEHMIPQLIDIEQNDRIKGILFVLNTVGGD 85 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-----------L 128 AG AI I+ +K KP ++ V S G ++ AS + ++ L Sbjct: 86 VEAGLAIAEMIRSLK--KPTVSLVIGGGHSIGVPLATASQYSFISPSATMIIHPIRMNGL 143 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 V IGV + Y ++ ++ +++S +K ++ + +++ D+ Sbjct: 144 V--IGVPQTFNYFNKMQER--INDFIIRTSEIK--LDVLKKMMMQTDELLNDM------- 190 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G I G EA K GLI+ VGG +E L +L ++ Sbjct: 191 ---------------------GTILVGEEAVKCGLINEVGGVKEALDKLNSLIEAYNVEP 229 >gi|110803390|ref|YP_698964.1| Clp protease [Clostridium perfringens SM101] gi|168207521|ref|ZP_02633526.1| clp protease [Clostridium perfringens E str. JGS1987] gi|169342742|ref|ZP_02863782.1| clp protease [Clostridium perfringens C str. JGS1495] gi|110683891|gb|ABG87261.1| putative endopeptidase [Clostridium perfringens SM101] gi|169299248|gb|EDS81318.1| clp protease [Clostridium perfringens C str. JGS1495] gi|170661146|gb|EDT13829.1| clp protease [Clostridium perfringens E str. JGS1987] Length = 229 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 92/240 (38%), Gaps = 59/240 (24%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 + ++ + I GQIE + +I ++ I ++D ++ L++ GG Sbjct: 26 KKEDSNIQVLTIIGQIEGHSVQPPQTKTTKYEHMIPQLIDIEQNDRIKGILFVLNTVGGD 85 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-----------L 128 AG AI I+ +K KP ++ V S G ++ AS + ++ L Sbjct: 86 VEAGLAIAEMIRSLK--KPTVSLVIGGGHSIGVPLATASKYSFISPSATMIIHPIRMNGL 143 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 V IGV + Y ++ ++ +++S +K ++ + +++ D+ Sbjct: 144 V--IGVPQTFNYFNKMQER--INDFIIRTSEIK--LDVLKKMMMQTDELLNDM------- 190 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G I G EA K GLI+ VGG +E L +L ++ Sbjct: 191 ---------------------GTILVGEEAVKCGLINEVGGVKEALDKLNSLIEAYNVEP 229 >gi|188585819|ref|YP_001917364.1| protein of unknown function DUF107 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350506|gb|ACB84776.1| protein of unknown function DUF107 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 458 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 9/123 (7%) Query: 13 VMLSLVTLTVVY--FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISR---DDSAT 67 V+L L + + S + V ++ + G IE + L + R +++A Sbjct: 15 VLLIFSGLFIHFEEVQAQSLADTGEKTVYQVPVEGNIE--RGLSAFLNRAFESAQEENAD 72 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ +++PGG+ A I I V PV V+ A SAG ++ AS+ I T Sbjct: 73 LIVLDINTPGGALDASFEIKDLI--VNEEIPVYAFVNSQAISAGSYLALASDEIYMRPTG 130 Query: 128 LVG 130 +G Sbjct: 131 TMG 133 >gi|15613919|ref|NP_242222.1| hypothetical protein BH1356 [Bacillus halodurans C-125] gi|10173972|dbj|BAB05075.1| BH1356 [Bacillus halodurans C-125] Length = 445 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 67/149 (44%), Gaps = 8/149 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVY-----FSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIE 58 +++I+ Y L+ + + ++ + + P V I + ++E + ++R Sbjct: 1 MERIRWLYGFLACILIAILLAPLQIMAQGEFRTSDQPLVYYIPVEQEVERGLEAFLQRSL 60 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + ++ A +++ +++PGG A + RA+++ P+ V + A SAG I+ + Sbjct: 61 DSAVEEGADHIVLEINTPGGRVDAAGNMARALRE--TDIPITAYVIDQALSAGAYIALNA 118 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + IV A S +GS V+ + Sbjct: 119 DEIVMAPGSTMGSAAVIDSAGNAADEKAQ 147 >gi|254172897|ref|ZP_04879571.1| NfeD protein [Thermococcus sp. AM4] gi|214033053|gb|EEB73881.1| NfeD protein [Thermococcus sp. AM4] Length = 454 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSA 66 ++TR + +TL V+ F + N V G I S + R I+ ++A Sbjct: 3 MRTRTLRPLALTLLVLMFLPAVLASPNQKTVYVAKFEGVITSYSVDQFSRYIEIAEKNNA 62 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVA 123 ALI+ + +PGGS A + I + I++ + PVI V +AASAG I+ S++I Sbjct: 63 EALIIEIDTPGGSGQAMQEIIQRIKE--STVPVIIYVYPPGAIAASAGTYIALGSHLIAM 120 Query: 124 AETSLVGSIGVLFQY 138 A ++ +G+ + Y Sbjct: 121 APSTSIGACEPILGY 135 >gi|217076631|ref|YP_002334347.1| periplasmic serine protease [Thermosipho africanus TCF52B] gi|217036484|gb|ACJ75006.1| periplasmic serine protease [Thermosipho africanus TCF52B] Length = 291 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ELI I+ D + + +PGG A E I A++ K++ V V Sbjct: 83 IEDSEELIRAIKMTPNDMPID---LIIHTPGGLVLAAEQIANALK--KHKGKVTVFVPHY 137 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV E +++G I Sbjct: 138 AMSGGTLIALAADEIVMDENAVLGPI 163 >gi|308069939|ref|YP_003871544.1| membrane-bound serine protease (ClpP class) [Paenibacillus polymyxa E681] gi|305859218|gb|ADM71006.1| Membrane-bound serine protease (ClpP class) [Paenibacillus polymyxa E681] Length = 455 Score = 74.8 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 4/124 (3%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSA 66 T ++M+S++ L +V+ S S+ + V I + +IE + +ER + D A Sbjct: 14 FLTLWIMVSVLLLPLVH-SESAAAQTKGGAVFVIPVDQEIEQGLGKFMERGFAEAADSKA 72 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ +++PGG E + + I+ + P + + AASAG I+ ++N IV Sbjct: 73 GLILLDINTPGGRVDTAEKLGKLIKD--SPIPTVAYIRGEAASAGSYIALSANKIVMKPG 130 Query: 127 SLVG 130 S++G Sbjct: 131 SIIG 134 >gi|288555734|ref|YP_003427669.1| hypothetical protein BpOF4_13630 [Bacillus pseudofirmus OF4] gi|288546894|gb|ADC50777.1| hypothetical protein BpOF4_13630 [Bacillus pseudofirmus OF4] Length = 446 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 3/148 (2%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIER 59 M + I +++ +++ + + F +S + V I + +E ++R + Sbjct: 1 MNRIRLNISLLFILCAMLLIPLQSFVYSETNTSDDTVVYYIPVEQTVERGLAAFMQRSFQ 60 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + D+ A +++ + +PGG+ A I R +Q P+I V + A SAG I+ ++ Sbjct: 61 SAADEGADYIVLEIHTPGGAVDAAGEIARLMQN--TDIPIIAFVTKEAISAGAYIALNAD 118 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDK 147 IV A + +G+ GV+ + Sbjct: 119 EIVMAPGTTMGAAGVIDGAGNAAEEKAQ 146 >gi|269837468|ref|YP_003319696.1| hypothetical protein Sthe_1439 [Sphaerobacter thermophilus DSM 20745] gi|269786731|gb|ACZ38874.1| protein of unknown function DUF114 [Sphaerobacter thermophilus DSM 20745] Length = 288 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 23/186 (12%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D +++ +PGG A E I A+++ K R V V Sbjct: 68 IEDSEQVLRAIRLTPEDMPVD-VVLH--TPGGLVLAAEQIAEALRRHKGR--VTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A S G LI+ ++ IV +++G + P + + +P + + + Sbjct: 123 AMSGGTLIALGADEIVMDPDAVLGPVDPQLGSP-QGGSYPAASILKALEEPNPNRDDQTL 181 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS---DGRIWTG------AE 217 + A + ++ V ++Y+ V+ ++P ++ + G WT + Sbjct: 182 I--LGDMARKALEQVYATTYNLLVK------HLPPEEADRAARALSGGQWTHDYPIDVEQ 233 Query: 218 AKKVGL 223 A+ +GL Sbjct: 234 ARGLGL 239 >gi|237738653|ref|ZP_04569134.1| peptidase S14 ClpP [Fusobacterium sp. 2_1_31] gi|229424136|gb|EEO39183.1| peptidase S14 ClpP [Fusobacterium sp. 2_1_31] Length = 358 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 90/233 (38%), Gaps = 49/233 (21%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ---ELIERI--ERISRDDSATALIVSLSSPGGSAY 81 + + ++ A + + G I + ++ ++ E I + V ++SPGGS + Sbjct: 5 FWNITKNEEAKSADVVMYGTIGSDEYWDDVCDKTIKEEIGNLGDVENINVHINSPGGSVF 64 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY--- 138 A AI ++ K + V + +AASA +I+ A +++ + ++ + Sbjct: 65 AAVAIANTLKNHKAK--VTAFIDGLAASAATIITSACDVVKMPKNAM------FMIHNPL 116 Query: 139 ---PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 K L+K G+ + VK D + +Y ++ Sbjct: 117 TWAYGNKQELEKTGILLDKVK-----------------------DSILETYL------AK 147 Query: 196 SRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 ++ ++ L D W EAK+ G ID + + E Q++ L + S+ Sbjct: 148 AKGKTKEELSALMDEEKWFNAEEAKEYGFIDEIVDEVENLQNVNNLLIVNSLA 200 >gi|207091881|ref|ZP_03239668.1| signal peptide protease IV [Helicobacter pylori HPKX_438_AG0C1] Length = 115 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 36/71 (50%) Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVW 234 + +Q++V+ Y FV V+++R + ++G++++ +A K+ LID + ++ Sbjct: 10 KEFLQNLVNEQYQMFVNDVAKARKLDAKDYKDFAEGKVFSAQKALKLKLIDKISTIKQAQ 69 Query: 235 QSLYALGVDQS 245 L L + Sbjct: 70 NRLMELSKVKK 80 >gi|330720768|gb|EGG98986.1| Periplasmic serine proteases (ClpP class) [gamma proteobacterium IMCC2047] Length = 113 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 8/111 (7%) Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG 229 + + Q V+ ++ F+ V + R + G IWTG +A ++GLID +G Sbjct: 1 MKEADKEFWQGVLSVTHKQFIEQVKKGRGDRLTSNDKVFSGLIWTGEQALEIGLIDGLGS 60 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYW--FCDLKNLSISSLLEDTIPL 278 V + + I D++ + + F D ++ +S L + + Sbjct: 61 TGFVAREVIG------EENIVDFSLKRTPFEEFADRLGIAAASTLANKFGV 105 >gi|296120997|ref|YP_003628775.1| hypothetical protein Plim_0730 [Planctomyces limnophilus DSM 3776] gi|296013337|gb|ADG66576.1| protein of unknown function DUF107 [Planctomyces limnophilus DSM 3776] Length = 828 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 83/248 (33%), Gaps = 34/248 (13%) Query: 37 HVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 V I + G I + L +I R + LI+ + SPGG A + I + Sbjct: 358 KVGIIRLDGVINQMNGTFLRRQIAR-YQAQGVELLIIEIDSPGGLATVSSELAELIASLS 416 Query: 95 NRK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K + + A S +++ + I A + +G + + P +++ + Sbjct: 417 EEKIRTVAWIPRQAISGAAMVALGCDEIYMAPNAKMGDVQPIEARPG--EAFERVPDKVM 474 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV-RLVSESRNIPYDKTLVLSDGRI 212 +V + + A + P+A+ + D F R S R + + G + Sbjct: 475 TVIRATLLALAK--QKGRPEAIAA--AMADRGTRVFRMREKSSGRVWFMTEEEAEAAGDL 530 Query: 213 W-----------------TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 W T A ++ + D + + + LG+ +R P Sbjct: 531 WEKGPQLEETRGEMVITLTAPRAVELKMADGIVPDLDALKE--KLGISAELR----LQPI 584 Query: 256 KNYWFCDL 263 K W L Sbjct: 585 KPSWVDSL 592 >gi|118431782|ref|NP_148461.2| hypothetical protein APE_2212.1 [Aeropyrum pernix K1] gi|116063104|dbj|BAA81224.2| conserved hypothetical protein [Aeropyrum pernix K1] Length = 292 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 38/238 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ + I I + + L +PGG A I RA+++ + RK I V Sbjct: 73 IDDSEAV---IRAIRSTPPEKPIALILHTPGGLVLAASQIARALKRHRGRK--IVIVPHY 127 Query: 107 AASAGYLISCASNIIVAAETSLVGSI---------GVLFQYPYVKPFLDKLGVSIKSVKS 157 A S G LI+ A++ I +++G + G P V G + Sbjct: 128 AMSGGTLIALAADEIRMDPNAVLGPLDPQLSAGPTGPAVPAPSVVKVARMKGKDAQ---- 183 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-- 215 ++V KA++ M++V+ V ++R + ++L++GR WT Sbjct: 184 ----DTTLILADVAEKAIEEMREVITELLKD-KMGVEKAR----ETAVLLTEGR-WTHDY 233 Query: 216 ----AEAKKVGLI--DVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 +A+++GL D V EV+Q + + R ++ P + K Sbjct: 234 PITFEKAREIGLPVSDEV--PPEVYQLMELYPQAPANRPGVEYLPQPIPYLPGQKGAG 289 >gi|261402510|ref|YP_003246734.1| protein of unknown function DUF114 [Methanocaldococcus vulcanius M7] gi|261369503|gb|ACX72252.1| protein of unknown function DUF114 [Methanocaldococcus vulcanius M7] Length = 282 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 29/219 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ + VI Sbjct: 72 TIEDSEEILRAIRSAPKDKPID---LIIHTPGGLVLAATQIAKALKNHPSETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQY--PYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G + L QY P + + + GV Sbjct: 127 YAMSGGTLIALAADKIIMDENAVLGPVDPQLGQYPAPSIVKAVKEKGVE-------KADD 179 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------A 216 + +++ KA+ +Q V Y E + + L++GR WT Sbjct: 180 QTIILADIAQKAINQVQRFV---YGLLKDKYGEE--KAKELSKTLTEGR-WTHDYPITVE 233 Query: 217 EAKKVGL-IDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EA+++GL +D EEV+ + R ++ P Sbjct: 234 EARELGLDVD-TNVPEEVYMLMELYKQPLKQRGTVEFMP 271 >gi|325674309|ref|ZP_08153998.1| Clp protease [Rhodococcus equi ATCC 33707] gi|325554989|gb|EGD24662.1| Clp protease [Rhodococcus equi ATCC 33707] Length = 376 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 37/181 (20%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +Q + E+I+ I+ D+ + V ++SPGGSA+ G AI A++ R V+ V +A Sbjct: 32 TSAQAIAEQIKDITADE----ITVRINSPGGSAFDGIAIMNALRAHNAR--VVVHVDGLA 85 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 ASA +I+ A + IV S + + F Sbjct: 86 ASAASVIAMAGDEIVMGPGS------QMMIH------------EAWVFTEGDAA-----F 122 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 + M D + S Y + +D+ L W T EA GL D Sbjct: 123 LRSEADRLDKMSDSITSLY-------ARRAGGDFDEWRALVAAETWFTAEEAVTAGLADR 175 Query: 227 V 227 + Sbjct: 176 I 176 >gi|189218107|ref|YP_001938749.1| membrane-bound serine protease, NfeD family [Methylacidiphilum infernorum V4] gi|189184965|gb|ACD82150.1| Membrane-bound serine protease, NfeD family [Methylacidiphilum infernorum V4] Length = 481 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%) Query: 1 MEFVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIE 58 M ++KI + LS + F + ++ V + IR +IE S + + Sbjct: 15 MRLGMRKIAA--IFLSFFSFCSPLFLNAGAIKGEGKIVYVLPIRDEIEQSMVYFVRRAVN 72 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 ++ A LI+ + +PGG A + E I R +++ ++ + A SAG I+ Sbjct: 73 EAMKN-GAQGLILDIDTPGGLANSMEKIIRELERFPLQENTYAFIDHKAYSAGAFIAACC 131 Query: 119 NIIVAAETSLVG 130 I A S++G Sbjct: 132 RHIYMAPGSVIG 143 >gi|150016096|ref|YP_001308350.1| peptidase S14, ClpP [Clostridium beijerinckii NCIMB 8052] gi|149902561|gb|ABR33394.1| peptidase S14, ClpP [Clostridium beijerinckii NCIMB 8052] Length = 235 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 55/235 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 ++ + + + ++I GQIE + +I ++ I ++D A L++ L+ Sbjct: 32 GNTTLATPNKRIQVLSIIGQIEGHSVLPPQTKATKYEHIIPQLIDIEQNDDAKGLLIVLN 91 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV----- 129 + GG AG AI I+ + KP ++ V S G ++ +++ ++ + Sbjct: 92 TVGGDVEAGLAISEMIRSMS--KPTVSIVIGGGHSIGVPLATSADFSFITPSATMIVHPV 149 Query: 130 ---G-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 G IGV + Y K ++ ++ V++S +K P ++ D Sbjct: 150 RMNGFVIGVSQTFEYFKKMQER--INEFIVRTSNIK----------PDTLERFMLQTDDL 197 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + G + G +A GLID VGG +E L L Sbjct: 198 LNDV--------------------GTMLIGKQAVDCGLIDQVGGIQEALSKLNEL 232 >gi|310643050|ref|YP_003947808.1| protein [Paenibacillus polymyxa SC2] gi|309248000|gb|ADO57567.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 455 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSA 66 T ++M+S++ L +VY S S+ + V I + +IE + +ER + D A Sbjct: 14 FLTLWIMISVLLLPLVY-SGSALAQTKGGAVFVIPVDQEIEQGLGKFMERGFAEAVDSKA 72 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ +++PGG E + + I+ + P + + AASAG I+ ++N I Sbjct: 73 GLILLDINTPGGRVDTAEKLGKLIKD--SPIPTVAYIKGEAASAGSYIALSANKIAMKPG 130 Query: 127 SLVG 130 S++G Sbjct: 131 SIIG 134 >gi|268323951|emb|CBH37539.1| conserved hypothetical membrane protein, containing NfeD-like domain [uncultured archaeon] gi|268325361|emb|CBH38949.1| conserved hypothetical membrane protein, containing NfeD-like domain [uncultured archaeon] gi|268325946|emb|CBH39534.1| conserved hypothetical membrane protein, containing NfeD-like domain [uncultured archaeon] Length = 443 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 8/133 (6%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL--IERIERIS 61 + KK+ ++++ ++++ + ++ E+ + + + G I + L +E + Sbjct: 1 MNKKLLRLFLIVLVLSVLFAFVAYGGGAEEGKRVIYVLNLEGTITEGSTLNVVEGFKEAE 60 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCAS 118 A A++V L +PGG + I + I ++ PVIT V +AASAG I + Sbjct: 61 EI-GADAVLVKLDTPGGLVGSTLEITKEIMN--SKVPVITYVTPKGAIAASAGSFILVSG 117 Query: 119 NIIVAAETSLVGS 131 NI + + GS Sbjct: 118 NIAAMSPGTTTGS 130 >gi|331671253|ref|ZP_08372067.1| minor capsid protein C (GPC) [Escherichia coli TA271] gi|331061525|gb|EGI33470.1| minor capsid protein C (GPC) [Escherichia coli TA271] Length = 73 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 31/61 (50%) Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +++ + +PGG I +V++ KPV ++M SAG L++ A++ + + Sbjct: 2 VDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLVTQ 61 Query: 126 T 126 T Sbjct: 62 T 62 >gi|196019855|ref|XP_002119057.1| hypothetical protein TRIADDRAFT_63023 [Trichoplax adhaerens] gi|190577146|gb|EDV18457.1| hypothetical protein TRIADDRAFT_63023 [Trichoplax adhaerens] Length = 215 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + + + +Q+ +D + F L+ R P +S G W G++AK++ L Sbjct: 1 MSVLGKNTEEGRKKVQEELDQIHSEFKNLIKLKR--PSIDIEKISTGEFWLGSKAKELKL 58 Query: 224 IDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 +D + + SLY Q +++ + F + SI E I + Sbjct: 59 VDEIMTSADYLTSLY-----QDNKQVYFVKYERKISFLEKLENSIGLSKETVIDVESSRS 113 Query: 284 VQGL 287 GL Sbjct: 114 FLGL 117 >gi|296133645|ref|YP_003640892.1| protein of unknown function DUF114 [Thermincola sp. JR] gi|296032223|gb|ADG82991.1| protein of unknown function DUF114 [Thermincola potens JR] Length = 277 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 27/174 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I +D + + L +PGG A E I A++K + + V + Sbjct: 67 IEDSEQVLRAIRLTPQDMPIS---LVLHTPGGLVLASEQIAHALEKHRAK--VTVYIPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK-----PFLDKLGVSIKSVKSSPM 160 A S G LI+ A++ IV E +++G + + +YP ++ + K++ Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQIGEYPAASIVKVLEEKERNEIDDKTII---- 177 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + A + ++ V D Y + E + K L++GR WT Sbjct: 178 ---------LADVAKKALKQVEDFVYGLLKDNLGEEKGRELAKI--LTEGR-WT 219 >gi|219854679|ref|YP_002471801.1| hypothetical protein CKR_1336 [Clostridium kluyveri NBRC 12016] gi|219568403|dbj|BAH06387.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 241 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 59/232 (25%) Query: 29 SHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSP 76 S + D + + + I GQIE + +I + + D ++V L++ Sbjct: 39 SSIADGNNKIQILPIIGQIEGHVTLPPETKATKYEHVIPNLILMENDPRVEGVLVVLNTV 98 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--------- 127 GG AG AI I+ + KP ++ V S G ++ AS+ + T+ Sbjct: 99 GGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATASDYSFISPTATMIVHPIRM 156 Query: 128 --LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 L+ IGV + Y ++ ++ V++S + + + + D Sbjct: 157 NGLI--IGVPQTFQYFNKMQER--INEFIVRTSR----------ITREKLSDLMLQSDDL 202 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + G I G +A + GLID VGG + + L Sbjct: 203 LNDM--------------------GTILIGKQAVEQGLIDKVGGISDAIKKL 234 >gi|320451100|ref|YP_004203196.1| periplasmic serine protease [Thermus scotoductus SA-01] gi|320151269|gb|ADW22647.1| periplasmic serine protease [Thermus scotoductus SA-01] Length = 277 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 39/192 (20%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D + + + L +PGG A E I A+ +++ V V Sbjct: 68 IDDSEQVLRAIR--LTDKNVP-IDLILHTPGGLVLAAEQIAEAL--LRHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L QYP L+K Sbjct: 123 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQYPAASILKVLEKK--------------- 167 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLS----DGRIWTG-- 215 P SEV+ + + ++ DV + + V +++P +K ++ G WT Sbjct: 168 --PLSEVDDQTL-ILADVAEKALKQVKATVKNLLLKHMPEEKAEEVAHLLSQG-TWTHDY 223 Query: 216 ----AEAKKVGL 223 +A+ +GL Sbjct: 224 PIDVDQARSLGL 235 >gi|332799059|ref|YP_004460558.1| hypothetical protein TepRe1_1105 [Tepidanaerobacter sp. Re1] gi|332696794|gb|AEE91251.1| protein of unknown function DUF107 [Tepidanaerobacter sp. Re1] Length = 445 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 36/237 (15%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVE--DNSPHVARIAIRGQIED--SQELIERIERIS 61 KKI ++ L+ + + V+ + S +V + +RG I++ + +I I Sbjct: 4 KKILITIFLICLIFAPMEQSLAGNTVKALEASEYVYIVPVRGVIDNGLATFIIRGIREAE 63 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 A ALI + +PGG + I AI +K P ++ ++ A SAG +I+ +S I Sbjct: 64 EM-QAKALIFEIDTPGGEVGSAIKISNAI--LKTSIPTVSFINNEATSAGVIIAISSETI 120 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 +A + IG P + ++ + +E + Q++ + Sbjct: 121 MAVPGAT---IGAAETRPNEEKYISYW------------SSALRSVAEKTGRDPQLVAAM 165 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGG-QEEVWQSL 237 D+ + V E K L L+ G A K+GL+D ++V Q + Sbjct: 166 ADA--DVVIEGVKE-----KGKILSLTTGE------AIKLGLVDEQADSLDQVIQRI 209 >gi|311069140|ref|YP_003974063.1| putative membrane bound hydrolase [Bacillus atrophaeus 1942] gi|310869657|gb|ADP33132.1| putative membrane bound hydrolase [Bacillus atrophaeus 1942] Length = 438 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 4/120 (3%) Query: 13 VMLSLVTLTVVYFSW-SSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALI 70 +M++L++L V++ ++ + +V I + +E + R + + D+ A +I Sbjct: 8 IMVALISLFVLFLIGVQPTIKSSKQNVWVIPVEKTVEKGLATFLARAFQEAEDNHAKHII 67 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 +++++PGG+ + I I PV V++ A SAG I+ ++ + A +G Sbjct: 68 LNINTPGGAVESALEIADTINH--ADIPVTAYVNKRALSAGAYIALQADDLYMAPGGKMG 125 >gi|163941505|ref|YP_001646389.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4] gi|163863702|gb|ABY44761.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4] Length = 247 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 37/204 (18%) Query: 31 VEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 ED + ++ I G I S+ E + R +D A + V ++S GGSA+ G AI Sbjct: 18 FEDKGENEYKLTIYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICN 77 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ +I + AASA +I+ A + IV ++ + + Sbjct: 78 LLKQHDAE--IIVHIDGWAASAASVIAMAGDKIVMPSNTM------MMIHQASTIEYGNA 129 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVL 207 + E + ++ + + +SY FV E R + D Sbjct: 130 DLF-----------------EKTARDLRKIDSALAASYKKRFVGTDEELRQLLKD----- 167 Query: 208 SDGRIW-TGAEAKKVGLIDVVGGQ 230 W T EA +GL D + + Sbjct: 168 ---ETWLTAEEAVALGLADEIADE 188 >gi|153954066|ref|YP_001394831.1| protease [Clostridium kluyveri DSM 555] gi|146346947|gb|EDK33483.1| Predicted protease [Clostridium kluyveri DSM 555] Length = 229 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 59/232 (25%) Query: 29 SHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSP 76 S + D + + + I GQIE + +I + + D ++V L++ Sbjct: 27 SSIADGNNKIQILPIIGQIEGHVTLPPETKATKYEHVIPNLILMENDPRVEGVLVVLNTV 86 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--------- 127 GG AG AI I+ + KP ++ V S G ++ AS+ + T+ Sbjct: 87 GGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATASDYSFISPTATMIVHPIRM 144 Query: 128 --LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 L+ IGV + Y ++ ++ V++S + + + + D Sbjct: 145 NGLI--IGVPQTFQYFNKMQER--INEFIVRTSR----------ITREKLSDLMLQSDDL 190 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 + G I G +A + GLID VGG + + L Sbjct: 191 LNDM--------------------GTILIGKQAVEQGLIDKVGGISDAIKKL 222 >gi|220931192|ref|YP_002508100.1| periplasmic serine protease (ClpP class) [Halothermothrix orenii H 168] gi|219992502|gb|ACL69105.1| periplasmic serine protease (ClpP class) [Halothermothrix orenii H 168] Length = 268 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I S D +++ + +PGG A E I AI+K ++ V V Sbjct: 67 IEDSEDILRAIRMTSDDKK---IVIVIHTPGGLVLAAEQIAHAIKKHPSK--VTVIVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G L++ A++ IV E +++G Sbjct: 122 AMSGGTLLALAADEIVMDENAVLG 145 >gi|218897608|ref|YP_002446019.1| phage protein [Bacillus cereus G9842] gi|218544209|gb|ACK96603.1| phage protein [Bacillus cereus G9842] Length = 260 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 45/207 (21%) Query: 38 VARIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +I ++G I + E+ +I + D + L+VS++SPGG + G Sbjct: 2 TVKIDVKGPIISNDEVWIYDWFEMDAASPGKISKALEDANGDDLVVSINSPGGYVHEGSE 61 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ A++ V ++ +AASA +I+ A++ + + T+ + + + Sbjct: 62 IYTALKNYPGH--VEVQIVGLAASAASVIAMAADKVRISPTA------QIMIH---NASM 110 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G K++ M + ++ V S ++ L Sbjct: 111 WNGGDHRDMSKAAEM---------LKTTDRAIVNAYVIKS------------GKSEEELL 149 Query: 206 VLSDGRIWTG-AEAKKVGLIDVVGGQE 231 + W G +A + +D + + Sbjct: 150 NMMAEETWMGPQQALENNFVDEIMFMD 176 >gi|226311643|ref|YP_002771537.1| hypothetical protein BBR47_20560 [Brevibacillus brevis NBRC 100599] gi|226094591|dbj|BAH43033.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 447 Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 90/233 (38%), Gaps = 27/233 (11%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDS 65 +++ + +L L+ + F+ +S I + IE + + R ++ Sbjct: 10 RVRLLFSLLCLIMGMTMLFAPASTTAKTYQKAVWIPVDSTIERGLESFLHRAFADAQQQQ 69 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A +I+ +++PGG A + I + I+ + VI + A SAG I+ +N I+ Sbjct: 70 ADLVILHINTPGGEVNAADQIGQLIR--QAPMHVIAYIDNQAFSAGTYIALNANEIIMTP 127 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S +G + + + S S+ MKA + A M+ +D+ Sbjct: 128 GSSMG------AATPIDLAGNAADIKFISGWSNKMKAAAELNNRNPDVARAMV--EIDT- 178 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV-VGGQEEVWQSL 237 F L + + D +AK++G D V +EE+ + L Sbjct: 179 --EFPGLKPKGTVLSLD------------AQQAKRLGYADDVVSNKEELLKKL 217 >gi|86606575|ref|YP_475338.1| S49 family peptidase [Synechococcus sp. JA-3-3Ab] gi|86555117|gb|ABD00075.1| peptidase S49 (protease IV) family, nonpeptidase-like protein [Synechococcus sp. JA-3-3Ab] Length = 285 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 22/187 (11%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I + + L +PGG A E I RA+ +++ V V Sbjct: 66 SIEDSEQVLRAIRLTPPNTPID---LILHTPGGLVLATEQIARAL--IRHPAKVTVFVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G +++ A++ IV +++G + L V P+ Sbjct: 121 YAMSGGTMLALAADEIVMDANAVLGPVDPQLGGYAAASILQ-------VVAEKPIAEIDD 173 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV----LSDGRI-----WTGA 216 + A + MQ V + V + R I ++ L+ G++ T Sbjct: 174 QTLILADLARKAMQQVQNFVRDLLKDDVPK-RKIAPERIEPLIQYLTSGQVTHDYPITAE 232 Query: 217 EAKKVGL 223 EA+++GL Sbjct: 233 EAQRLGL 239 >gi|15966977|ref|NP_387330.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium meliloti 1021] gi|307302445|ref|ZP_07582202.1| Endopeptidase Clp [Sinorhizobium meliloti BL225C] gi|307316225|ref|ZP_07595669.1| Endopeptidase Clp [Sinorhizobium meliloti AK83] gi|18202305|sp|P58277|CLPP1_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|15076250|emb|CAC47803.1| Probable ATP-dependent CLP protease proteolytic subunit [Sinorhizobium meliloti 1021] gi|306898065|gb|EFN28807.1| Endopeptidase Clp [Sinorhizobium meliloti AK83] gi|306903115|gb|EFN33705.1| Endopeptidase Clp [Sinorhizobium meliloti BL225C] Length = 205 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 75/204 (36%), Gaps = 35/204 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + + + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDAVSALVCAQLLFLEAESPKKPIQLYINSPGGVVTSGFAMYDTMRYIRA-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + A + SI V + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEAGERTALPNA---SILVHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ + +Y F R + D R T Sbjct: 148 RRTKHR------------MTRLYAEHCGRTYEEF------ERAMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA 239 EA + GLID + + E+ A Sbjct: 182 EEALEWGLIDRIITEREIGAERDA 205 >gi|18976612|ref|NP_577969.1| hypothetical protein PF0240 [Pyrococcus furiosus DSM 3638] gi|18892179|gb|AAL80364.1| hypothetical protein PF0240 [Pyrococcus furiosus DSM 3638] Length = 280 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 31/220 (14%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 72 SIEDSEEVLRAIRMAPKDKPID---LIIHTPGGLVLAATQIAKALKDHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ +++G + L QYP + +K+ K Sbjct: 127 YAMSGGTLIALAADKIIMDPHAVLGPVDPQLGQYP-----------APSIIKAVEQKGAE 175 Query: 165 SPFSE---VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------ 215 + + A + ++ V D Y E + + L++GR WT Sbjct: 176 KVDDQTLILADVAKKAIKQVQDFLYDLLKDKYGEEKARELAQI--LTEGR-WTHDYPITV 232 Query: 216 AEAKKVGL-IDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 A+++GL +D EEV+ + R ++ P Sbjct: 233 EHARELGLEVD-TNVPEEVYALMELYKQPVRQRGTVEFMP 271 >gi|331270735|ref|YP_004397329.1| caseinolytic protease (Clp) [Clostridium botulinum BKT015925] gi|329127698|gb|AEB77639.1| caseinolytic protease (Clp) [Clostridium botulinum BKT015925] Length = 258 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 79/212 (37%), Gaps = 45/212 (21%) Query: 30 HVEDNSPHVARIAIRGQIEDSQELI--------------ERIERISRDDSATALIVSLSS 75 + + + A I + GQI D + + E I ++ + + + ++S Sbjct: 20 ELTNETESSADIYLYGQIVDEKPVNWWTGKEEEGEFIYPENIRKLVNEAGDKEINLHINS 79 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 GGS YA +I +++ KN+ + + +AAS +I+ A++ I E + + Sbjct: 80 TGGSIYASISIHNFLKQAKNK--INVYIDGIAASGASIIAMAADKIFMPENT------TM 131 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 + +GV + F E V++S FV + E Sbjct: 132 MIH------RAAVGVYGNVETLRKVANTLEKFDE----------TVLNSYKERFVGEIGE 175 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + D+T T E K +GL D + Sbjct: 176 LKALIEDET-------YLTATECKSLGLCDEI 200 >gi|297526178|ref|YP_003668202.1| protein of unknown function DUF114 [Staphylothermus hellenicus DSM 12710] gi|297255094|gb|ADI31303.1| protein of unknown function DUF114 [Staphylothermus hellenicus DSM 12710] Length = 286 Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 26/187 (13%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I + ALI+ +PGG A I A+++ K +K I V Sbjct: 72 IEDSEAVLRAIRNTPENQPI-ALILH--TPGGLVLAASQIAMALKRHKGKK--IVIVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A S G LI+ A++ I+ +++G + Q P L + I +K + Sbjct: 127 AMSGGTLIALAADEIIMDPDAVLGPLDPQLQTPKGTFPAPSL-IKIAKMKGDKASDDTLI 185 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIWTG------A 216 + ++ KA++ +Q+ + +P +K ++ +G +T Sbjct: 186 YGDIAEKALREIQEFIVQLLKD---------KMPEEKASEVAKKLTEG-YYTHDYPITVE 235 Query: 217 EAKKVGL 223 AK++GL Sbjct: 236 HAKELGL 242 >gi|219669156|ref|YP_002459591.1| peptidase S14 ClpP [Desulfitobacterium hafniense DCB-2] gi|219539416|gb|ACL21155.1| peptidase S14 ClpP [Desulfitobacterium hafniense DCB-2] Length = 230 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 86/224 (38%), Gaps = 41/224 (18%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGG 78 + + S + + + GQIE Q +I ++ + ++ +++ L++ GG Sbjct: 27 IPEPSESIYCLTVVGQIEGHQVLSAQTKATKYEHVIPQLFAVEQNPKVEGILLILNTAGG 86 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 AG AI + + KP ++ V S G I+ + + A T G + + Sbjct: 87 DVEAGLAISELVSSLS--KPSVSIVLGGGHSIGIPIAVSCDRSFIAPT------GTMTLH 138 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + G+ I + +Q MQ+ ++S ++ E Sbjct: 139 P-----IRYTGLVINGHQQFDY--------------LQKMQERINSFIIQHSQITEEQLK 179 Query: 199 IPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 T L+ G I G +A +GLID VGG +E + L L Sbjct: 180 KLMFATGELAQDIGTILIGQDAVDIGLIDAVGGLKEAYGELKRL 223 >gi|14590206|ref|NP_142271.1| hypothetical protein PH0282 [Pyrococcus horikoshii OT3] gi|3256671|dbj|BAA29354.1| 280aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 280 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 27/187 (14%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 72 SIEDSEEVLRAIRMAPKDKPID---LIIHTPGGLVLAATQIAKALKDHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQY--PYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ +++G + L QY P + ++K GV K Sbjct: 127 YAMSGGTLIALAADKIIMDPHAVLGPVDPQLGQYPAPSIVRAVEKKGVD---------KV 177 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------A 216 + + + Q D ++ E + + L++GR WT Sbjct: 178 DDQTLILADVAEKAIRQVR-DFIFNLLKDKYGEEKAKELAQV--LTEGR-WTHDYPITVE 233 Query: 217 EAKKVGL 223 EAKK+GL Sbjct: 234 EAKKLGL 240 >gi|239616994|ref|YP_002940316.1| protein of unknown function DUF114 [Kosmotoga olearia TBF 19.5.1] gi|239505825|gb|ACR79312.1| protein of unknown function DUF114 [Kosmotoga olearia TBF 19.5.1] Length = 280 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + + +PGG A E I RA++ K++ V V Sbjct: 72 IEDSEEVLRAIKMTPDDMPIDFI---IHTPGGLVLAAEQIARALK--KHKGKVTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV E +++G + + QYP Sbjct: 127 AMSGGTLIAIAADEIVMDENAVLGPLDPQIGQYP 160 >gi|296109420|ref|YP_003616369.1| protein of unknown function DUF114 [Methanocaldococcus infernus ME] gi|295434234|gb|ADG13405.1| protein of unknown function DUF114 [Methanocaldococcus infernus ME] Length = 271 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 30/191 (15%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I RA++ VI Sbjct: 67 SIEDSEEILRAIRSAPKDKPID---LIIHTPGGLVLAASQIARALKNHPAETRVIV--PH 121 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ + +++G + L QYP + VK+ K + Sbjct: 122 YAMSGGTLIALAADKIIMDKNAVLGPVDPQLGQYP-----------APSIVKAVEEKGKE 170 Query: 165 SPFSE---VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------ 215 + + + A + ++ V + Y E + K L++GR WT Sbjct: 171 NVEDKTLILADVAKKAIKQVENFVYWLLKDKYGEEKAKELAKI--LTEGR-WTHDYPITV 227 Query: 216 AEAKKVGL-ID 225 EA K+GL +D Sbjct: 228 DEAIKLGLKVD 238 >gi|315230668|ref|YP_004071104.1| hypothetical protein TERMP_00905 [Thermococcus barophilus MP] gi|315183696|gb|ADT83881.1| hypothetical protein TERMP_00905 [Thermococcus barophilus MP] Length = 279 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 35/191 (18%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI + Sbjct: 72 SIEDSEEILRAIRMAPKDKPID---LIIHTPGGLVLAATQIAKALKDHPAETRVI--IPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ +++G + L QYP + K P K Sbjct: 127 YAMSGGTLIALAADKIIMDPHAVLGPVDPQLGQYPAPS-------IVRAVEKKGPEKV-- 177 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP--YDKTLVLSD----GRIWTG--- 215 ++ DV + + + V E +K L+ GR WT Sbjct: 178 -------DDQTLILADVAEKAINQVRNFVYELLKDKYGEEKAKELAQILTEGR-WTHDYP 229 Query: 216 ---AEAKKVGL 223 EA+K+GL Sbjct: 230 ITVEEAQKLGL 240 >gi|332157739|ref|YP_004423018.1| nfeD protein [Pyrococcus sp. NA2] gi|331033202|gb|AEC51014.1| nfeD protein [Pyrococcus sp. NA2] Length = 439 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 18/138 (13%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDD 64 KKI V+L+LV S + N +VA+I RGQI + + +R I+ ++ Sbjct: 3 KKILLFIVLLTLVA--------SPSLASNVVYVAQI--RGQITSYTYDQFDRYITIAEEN 52 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV---HEMAASAGYLISCASNI 120 +A A+I+ L +PGG A +A+ IQ+++ K PVI V +AASAG I+ S++ Sbjct: 53 NARAIIIELDTPGGRA---DAMMNIIQRIQQAKVPVIVFVYPPGAIAASAGTYIALGSHL 109 Query: 121 IVAAETSLVGSIGVLFQY 138 I A + +G+ + Y Sbjct: 110 IAMAPGTSIGACRPILGY 127 >gi|218898920|ref|YP_002447331.1| Clp protease [Bacillus cereus G9842] gi|218544430|gb|ACK96824.1| Clp protease [Bacillus cereus G9842] Length = 247 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 47/231 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 28 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNQLKQHSAE- 86 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + I+ ++ + + + Sbjct: 87 -IIVHIDGWAASAASVIAMAGDRIIMPSNTM------MMIHQ-----------------A 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + E + ++ + + SY FV ++ L W T Sbjct: 123 STFEYGNADLFEKTARDLRKIDSALAGSYKKRFVG--------TDEELKQLLKDETWLTA 174 Query: 216 AEAKKVGLIDVVG----------GQEEVWQSLYALGVDQSIRKIKDWNPPK 256 EA +GL D + +EEV ++L V + +++ + NP + Sbjct: 175 EEAVALGLADEIADEIEIDDTQEDEEEVVENLKESLVAKYMKQQNNQNPKE 225 >gi|217967716|ref|YP_002353222.1| protein of unknown function DUF114 [Dictyoglomus turgidum DSM 6724] gi|217336815|gb|ACK42608.1| protein of unknown function DUF114 [Dictyoglomus turgidum DSM 6724] Length = 280 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 31/219 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I D + L +PGG A E I A++ K + V V Sbjct: 67 IEDSEEILRAIRLTPEDMPID---LILHTPGGLVLAAEQIAHALKNHKGK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G I+ A++ I+ E +++G + L +YP ++ K K Sbjct: 122 AMSGGTFIALAADEIIMDENAVLGPVDPQLGEYPAASILNA---INRKGADKVEDKTLI- 177 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIWTG------ 215 + A + ++ V +S + +P +K ++ G WT Sbjct: 178 ----LGDVAEKAIRQVKESVFELLKD------KMPEEKAKEIAEILSTG-TWTHDYPITV 226 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EA+K+GL VG +E++ + R + P Sbjct: 227 EEAQKLGLPVKVGLPKEIYALMNLYPQSPGSRPSVQYIP 265 >gi|294795017|ref|ZP_06760152.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella sp. 3_1_44] gi|294454379|gb|EFG22753.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella sp. 3_1_44] Length = 363 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 30/157 (19%) Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 ++S GG +A +AI I+ + V + + ASA +I+CA++ ++ +L Sbjct: 60 RINSGGGDVFAAQAIHNMIKAYAGK--VTAHIDGLCASAATIIACAADKVIMPRNAL--- 114 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 + LG S + + M ++ + + Y Sbjct: 115 -------YMIHNPSVYLGDSFDADGLTKMANYL-----------ASVKQTIANVYL---- 152 Query: 192 LVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 S S + ++ L D W T EAK GLID V Sbjct: 153 --SRSDVLTSEQVKTLMDDETWLTADEAKSYGLIDEV 187 >gi|221632773|ref|YP_002521995.1| hypothetical protein trd_0764 [Thermomicrobium roseum DSM 5159] gi|221156384|gb|ACM05511.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM 5159] Length = 282 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 30/219 (13%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+D++ + + I + + +PGG A E I A+ + + + V V Sbjct: 68 IDDAEAV---LRAIRLTPDEMPIDFIVHTPGGLVLAAEQIASALVRHRGK--VTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV E +++G + + QYP + V+ P+ Sbjct: 123 AMSGGTLIALAADEIVMDENAVLGPVDPQIGQYPAASVL--------RVVREKPVAEIDD 174 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----GRIWTG------ 215 + + M+ V+++ VR + + ++ ++D G+ WT Sbjct: 175 QTLILADIGEKAMRQ-VNAT----VRHILMANGRSEEEAQRIADVLTCGQ-WTHDYPIDV 228 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EA+++GL VG +EV+Q + R + P Sbjct: 229 EEARQLGLPVTVGVPDEVYQLMELYPQAMQRRPSVQYIP 267 >gi|332523237|ref|ZP_08399489.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Streptococcus porcinus str. Jelinkova 176] gi|332314501|gb|EGJ27486.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Streptococcus porcinus str. Jelinkova 176] Length = 232 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 65/192 (33%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + I GQI D E+ +I + + + ++SPGG +A I+ + + Sbjct: 16 LRIEGQIADETWFGDEVTPQIFKNELTSGTGDITLWINSPGGDVFAAAQIYNMLMDYQGD 75 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V + +AASA +I+ A + + ++ + + + + Sbjct: 76 --VHVIIDGLAASAASVIAMAGTTVSMSPVAM------MMIH------------NPWTFA 115 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 K + +++ + ++Y + K L D W Sbjct: 116 QGEAKDMAKVIEMLGE-----IKESIINAYEL-------RTGLSRTKISHLMDSESWFNA 163 Query: 216 AEAKKVGLIDVV 227 +A ++G D V Sbjct: 164 KKAVELGFADKV 175 >gi|255655334|ref|ZP_05400743.1| translocation-enhancing protein TepA [Clostridium difficile QCD-23m63] Length = 244 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 39/221 (17%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I G+IE + +I + I + ++V L++ GG AG AI Sbjct: 47 ITIIGEIEGHFIGNPQKKATKYEHIIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAE 106 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + K V+T V + S G ++ A + A T+ + +P Sbjct: 107 LLN--STSKKVVTLVLGGSHSIGVPLATAGDYSFIAPTA------TMIIHP--------- 149 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + F +++Q ++ +S + V E + ++K ++S Sbjct: 150 -----VRTTGLVIGINETFEYFKKMQDRIIQFIIRTSNI--KKDVLE--KLMHEKDELVS 200 Query: 209 D-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 D G + G EA GLID VGG +E + L L + K Sbjct: 201 DVGSVLIGKEAVDYGLIDEVGGLKEALKKLRELIKESEEEK 241 >gi|169334787|ref|ZP_02861980.1| hypothetical protein ANASTE_01193 [Anaerofustis stercorihominis DSM 17244] gi|169257525|gb|EDS71491.1| hypothetical protein ANASTE_01193 [Anaerofustis stercorihominis DSM 17244] Length = 272 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 52/232 (22%) Query: 37 HVARI-AIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 ++ I I G IE + +I I + D +++ L++ GG AG AI Sbjct: 47 TISIIGEIEGHIEAGSPKKSTKYEHIIPMIIDVEEKDEIKGVLLILNTMGGDVEAGLAIS 106 Query: 88 RAIQKVKNRKPVITEVHE--------MAASAGYLISCASNIIVAAETSLVG-SIGVLFQY 138 I + KP +T V +A S Y + ++ G IGVL + Sbjct: 107 ELISGMS--KPCVTLVLGGSHSIGVPLAVSGSYSFIVPTATMMIHPIRTTGLVIGVLQSF 164 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 Y + +++ S+ K + + +V+ Sbjct: 165 LYFQKMQERI-TEFVVEHSNVDKELFNKIMLNTDE-------LVNDM------------- 203 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 G + G +A ++GLID VG + L+ L + K K Sbjct: 204 -----------GSVLVGEQAVEIGLIDAVGSLSDARNKLFELIREYEHEKCK 244 >gi|315186644|gb|EFU20403.1| hypothetical protein SpithDRAFT_1037 [Spirochaeta thermophila DSM 6578] Length = 284 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 41/193 (21%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ ++ I+ DD + + L +PGG A E I A++K + V V Sbjct: 67 IDDSEAVLRAIK--MTDDDVP-IDLILHTPGGLVVAAEQIAYALKKHPAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ +V E +++G + + Q P L++ Sbjct: 122 AMSGGTLIALAADEVVMDENAVLGPVDPQIGQQPAASILKVLERK--------------- 166 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS---ESRNIPYDKTLVLSDGRIWTGA---- 216 P +EV+ + + ++ DV + + R+V E R +P DK ++ R+ TG Sbjct: 167 --PIAEVDDETI-ILADVAEKAIRQVKRVVKTLLEGR-LPGDKVEEIAT-RLATGEFTHD 221 Query: 217 ------EAKKVGL 223 EA+++GL Sbjct: 222 YPITVDEARELGL 234 >gi|225863816|ref|YP_002749194.1| peptidase S14 ClpP [Bacillus cereus 03BB102] gi|228986816|ref|ZP_04146944.1| Peptidase S14 ClpP [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|225785756|gb|ACO25973.1| peptidase S14 ClpP [Bacillus cereus 03BB102] gi|228772898|gb|EEM21336.1| Peptidase S14 ClpP [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 247 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 37/207 (17%) Query: 31 VEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + ++ + G I S+ E + R +D A + V ++S GGSA+ G AI Sbjct: 18 FESKGENEYKLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICN 77 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ +I + AASA +I+ A + I+ ++ + + Sbjct: 78 QLKQHSAE--IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ--------- 120 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVL 207 +S + + E + ++ + + +SY FV ++ L Sbjct: 121 --------ASTFEYGNADLFEKTARDLRKIDSALAASYKKRFVG--------TDEELKQL 164 Query: 208 SDGRIW-TGAEAKKVGLIDVVGGQEEV 233 W T EA +GL D + + E+ Sbjct: 165 LKDETWLTAEEAVALGLADEIADEIEI 191 >gi|194467896|ref|ZP_03073882.1| peptidase S14 ClpP [Lactobacillus reuteri 100-23] gi|194452749|gb|EDX41647.1| peptidase S14 ClpP [Lactobacillus reuteri 100-23] Length = 258 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 37/222 (16%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRD-DSATALIVSLSSP 76 V + + +++ + I G+I ED+ + + + ++SP Sbjct: 5 VLPKYLTIKQESKNMTPEMYIDGEIVTDEYEDTDTSAAGFRNALKSLGDVKNINLHINSP 64 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 GGS + G AI+ +++ + + +AAS +I+ + + I S+ + Sbjct: 65 GGSVFEGIAIYNMLKQNSAH--INVYIDGLAASIASVIAMSGDAIFMPSNSM------MM 116 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + P++ +G + + Q+ + V +Y Sbjct: 117 VH---NPWVMAIG-------------NANELRKQADALDQITKSSV-QTYLA-----KAG 154 Query: 197 RNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + L D W T EA GL D V + S+ Sbjct: 155 DKLDEKTLTQLMDDETWLTAQEAVDYGLADEVMEPNKAVASI 196 >gi|256810323|ref|YP_003127692.1| protein of unknown function DUF114 [Methanocaldococcus fervens AG86] gi|256793523|gb|ACV24192.1| protein of unknown function DUF114 [Methanocaldococcus fervens AG86] Length = 282 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 87/220 (39%), Gaps = 31/220 (14%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 72 TIEDSEEILRAIRTAPKDKPID---LIIHTPGGLVLAATQIAKALKAHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ +++ I+ E +++G + L QYP + VK+ K Sbjct: 127 YAMSGGTLIALSADKIIMDENAVLGPVDPQLGQYP-----------APSIVKAVEQKGAD 175 Query: 165 SPFSE---VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------ 215 + + A + + V + Y + + +L++G+ WT Sbjct: 176 KVDDQTLILADIAKKAINQVQNFVYTLLKD--KYGKEKAKELAKILTEGK-WTHDYPITV 232 Query: 216 AEAKKVGL-IDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 EAK +GL +D EEV++ + R ++ P Sbjct: 233 EEAKNLGLDVD-TNVPEEVYELMELYKQPIKQRGTVEFMP 271 >gi|225175063|ref|ZP_03729059.1| protein of unknown function DUF107 [Dethiobacter alkaliphilus AHT 1] gi|225169239|gb|EEG78037.1| protein of unknown function DUF107 [Dethiobacter alkaliphilus AHT 1] Length = 437 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 3/127 (2%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRD 63 +K +ML L T ++ V V I I G +E +ER R + + Sbjct: 1 MKNRTVALIMLLLFTGMSIFTVQPPAVSAEQETVYVIPIGGAVEQGLHRYLERSFREAEE 60 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 A A+I+ +++PGG+ A I I PV V A SAG I+ +++ + Sbjct: 61 AGAQAIILEINTPGGAVDAATQIRDLIY--GADMPVYAYVRWSAISAGAYIALSADALYM 118 Query: 124 AETSLVG 130 A S +G Sbjct: 119 APGSNIG 125 >gi|167037609|ref|YP_001665187.1| peptidase S14, ClpP [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307264928|ref|ZP_07546490.1| peptidase S14 ClpP [Thermoanaerobacter wiegelii Rt8.B1] gi|320116024|ref|YP_004186183.1| peptidase S14 ClpP [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326389423|ref|ZP_08210990.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus JW 200] gi|166856443|gb|ABY94851.1| peptidase S14, ClpP [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306920186|gb|EFN50398.1| peptidase S14 ClpP [Thermoanaerobacter wiegelii Rt8.B1] gi|319929115|gb|ADV79800.1| peptidase S14 ClpP [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325994428|gb|EGD52853.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus JW 200] Length = 238 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 93/237 (39%), Gaps = 59/237 (24%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 ++V + ++ + I GQIE + +I ++ I + + +++ L+ Sbjct: 27 GQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTTKYEHIIPQLVAIEENPNIKGVLILLN 86 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS------- 127 + GG AG AI I + KP ++ V S G ++ ++N ++ Sbjct: 87 TVGGDVEAGLAIAEMIASLS--KPTVSIVLGGGHSIGVPLAVSANYSYIVPSATMTIHPI 144 Query: 128 -LVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + G I GV + Y D++ V V++S +K + M+ ++ Sbjct: 145 RMTGLIVGVPQTFDYFNKMQDRI-VEF-IVRNSKIKRDT------------FMKLML--- 187 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 KT L++ G I G EA GLID +GG +E + L+ + Sbjct: 188 -----------------KTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNM 227 >gi|296133921|ref|YP_003641168.1| protein of unknown function DUF107 [Thermincola sp. JR] gi|296032499|gb|ADG83267.1| protein of unknown function DUF107 [Thermincola potens JR] Length = 450 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 84/240 (35%), Gaps = 58/240 (24%) Query: 3 FVLKKIKTRY-VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERI 60 F+L++ R V ++ L + S V + + I I+G+IE +ER Sbjct: 6 FLLQRRFRRIAVYPLIILLGLALNLGSGPVFADQAKIVFIPIKGEIEPGMASFVERSLDK 65 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + A ++ + +PGG + + I I + P + ++ A SAG LI+ A+ Sbjct: 66 AEQMGAKKVVFEIDTPGGLIDSAQRIKTRI--FNAQVPTVAFINGEAKSAGVLIALAAEE 123 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 I + +G+ + NPK + + Sbjct: 124 IYMTPGTAIGAAEPV---------------------------------PNNPKILASWRS 150 Query: 181 VVDSSYHWFVRLVSESRNIPYDKTLVLSD-----------GRI--WTGAEAKKVGLIDVV 227 ++ + +E+R ++D G I T +A ++G+ D + Sbjct: 151 DLEEA--------AEARGRNPKIVAGMADRNVVIENIKEKGEILSLTAKKAVELGIADKI 202 >gi|46241429|gb|AAS82914.1| capsid protein [Wolbachia phage WO] gi|46241447|gb|AAS82923.1| capsid protein [Wolbachia phage WO] Length = 141 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQS 236 V E Sbjct: 60 GVTTFFEFINK 70 >gi|310779736|ref|YP_003968068.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926] gi|309749059|gb|ADO83720.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926] Length = 361 Score = 72.5 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 77/203 (37%), Gaps = 34/203 (16%) Query: 32 EDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 E S + I I G+I + + +E+I ++ ++V ++SPGG + Sbjct: 11 ETGSEKNSEIKIFGEIVNIPCWEGDVSANSFCRELEKIEAEE----ILVRINSPGGDVFE 66 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP--- 139 +AI+ +++ + VI + +AASA +I+ A + I+ E ++ + Sbjct: 67 AQAIYNSLKNHPAK--VIVRIDALAASAATVIAMAGDEILMPENAI------FMIHNPWS 118 Query: 140 -------YVKPFLDKLG-VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 + + + + V K+ S +N + ++ F+ Sbjct: 119 WSSGEAKDFRKKAETMDTIRETIVNVYASKSTLSREEIMNKMDEESWLTSQEAFDAGFIT 178 Query: 192 LV--SESRNIPYDKTLVLSDGRI 212 + ++ + ++ GR+ Sbjct: 179 EILSLKAEDSDTEEVNNFMRGRV 201 >gi|89894720|ref|YP_518207.1| hypothetical protein DSY1974 [Desulfitobacterium hafniense Y51] gi|89334168|dbj|BAE83763.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 209 Score = 72.5 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 41/224 (18%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGG 78 + + S + + + GQIE Q +I ++ + ++ +++ L++ GG Sbjct: 6 IPEPSESIYCLTVVGQIEGHQVLSAQTKATKYEHVIPQLFAVEQNPKVEGILLILNTAGG 65 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 AG AI + + KP ++ V S G I+ + + A T G + + Sbjct: 66 DVEAGLAISELVSSLS--KPSVSIVLGGGHSIGIPIAVSCDRSFIAPT------GTMTLH 117 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P + G+ I + +Q MQ+ ++S R+ E Sbjct: 118 P-----IRYTGLVINGHQQFDY--------------LQKMQERINSFIIQHSRITEEQLK 158 Query: 199 IPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 T L+ G I G +A +GLID VGG +E + L L Sbjct: 159 KLMFATGELAQDIGTILIGQDAVDIGLIDAVGGLKEAYGELKRL 202 >gi|167040270|ref|YP_001663255.1| peptidase S14, ClpP [Thermoanaerobacter sp. X514] gi|256750804|ref|ZP_05491689.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus CCSD1] gi|300914354|ref|ZP_07131670.1| peptidase S14 ClpP [Thermoanaerobacter sp. X561] gi|307724410|ref|YP_003904161.1| peptidase S14 ClpP [Thermoanaerobacter sp. X513] gi|166854510|gb|ABY92919.1| peptidase S14, ClpP [Thermoanaerobacter sp. X514] gi|256750387|gb|EEU63406.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus CCSD1] gi|300889289|gb|EFK84435.1| peptidase S14 ClpP [Thermoanaerobacter sp. X561] gi|307581471|gb|ADN54870.1| peptidase S14 ClpP [Thermoanaerobacter sp. X513] Length = 238 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 93/237 (39%), Gaps = 59/237 (24%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 ++V + ++ + I GQIE + +I ++ I + + +++ L+ Sbjct: 27 GQTNVPNFESNIHCLTIIGQIEGHMILPPQNKTTKYEHIIPQLVAIEENPNIKGVLILLN 86 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS------- 127 + GG AG AI I + KP ++ V S G ++ ++N ++ Sbjct: 87 TVGGDVEAGLAIAEMIASLS--KPTVSIVLGGGHSIGVPLAVSANYSYIVPSATMTIHPI 144 Query: 128 -LVGSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + G I GV + Y D++ V V++S +K + M+ ++ Sbjct: 145 RMTGLIVGVPQTFDYFNKMQDRI-VEF-IVRNSKIKRDT------------FMKLML--- 187 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 KT L++ G I G EA GLID +GG +E + L+ + Sbjct: 188 -----------------KTGELANDIGTILVGKEAVDYGLIDEIGGIKEALKRLHNM 227 >gi|327440946|dbj|BAK17311.1| membrane-bound serine protease [Solibacillus silvestris StLB046] Length = 442 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 67/135 (49%), Gaps = 10/135 (7%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIER---ISRDDSATA 68 ++ L +++ +++ S ++ + V I+I +IE + L+E ++R ++ ++A A Sbjct: 9 WIFLMVMSFVLMFPSLTAFADG---KVYEISISNEIE--KGLVEHLKRGFDEAKSNNAEA 63 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +I+++ +PGG A I R + + P+I V+ A SAG I+ ++ I + Sbjct: 64 IILNMHTPGGFVAAASEIGRLMDAI--DIPIIAFVNSDALSAGAYIALHADKIYMTPNAT 121 Query: 129 VGSIGVLFQYPYVKP 143 +G+ V+ Sbjct: 122 MGAAAVIDSSGNTAG 136 >gi|256810842|ref|YP_003128211.1| protein of unknown function DUF114 [Methanocaldococcus fervens AG86] gi|256794042|gb|ACV24711.1| protein of unknown function DUF114 [Methanocaldococcus fervens AG86] Length = 278 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 22/172 (12%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + + +PGG A A E I A+++ K + VI + Sbjct: 67 TIEDSEEILRAIRLTPEDMPID---LIIHTPGGLALASEQIALALKEHKAKTTVI--IPH 121 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ + +++G + + QYP K G + Sbjct: 122 YAMSGGSLIALAADEIIMDKNAVMGPVDPQIGQYPAASILEAYYKKGDKVD--------D 173 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 E +++ KA++ M++ V Y + L+ G +WT Sbjct: 174 ETLILVDISKKAIRQMEEFV---YELLKD--KYGDEKAKEIAKKLTSG-VWT 219 >gi|253796912|gb|ACT35711.1| capsid protein [Wolbachia phage WO] Length = 98 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQ 235 V E Sbjct: 60 GVTTFFEFIN 69 >gi|86607602|ref|YP_476364.1| S49 family peptidase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556144|gb|ABD01101.1| peptidase S49 (protease IV) family, nonpeptidase-like protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 289 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 22/187 (11%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I + + L +PGG A E I RA+ +++ V V Sbjct: 66 SIEDSEQVLRAIRLTPPNTPID---LILHTPGGLVLATEQIARAL--IRHPAKVTVFVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G +++ A++ IV +++G + L V P+ Sbjct: 121 YAMSGGTMLALAADEIVMDANAVLGPVDPQLGGYAAASILQ-------VVADKPIAEIDD 173 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV----LSDGRI-----WTGA 216 + A + MQ V + V + R I ++ L+ G++ T Sbjct: 174 QTLILADLARKAMQQVQNFVRDLLKDDVPK-RKIAPERIEPLIQYLTSGQVTHDYPITAE 232 Query: 217 EAKKVGL 223 EA+++GL Sbjct: 233 EAQRLGL 239 >gi|15895087|ref|NP_348436.1| periplasmic serine protease [Clostridium acetobutylicum ATCC 824] gi|15024785|gb|AAK79776.1|AE007690_3 Periplasmic serine protease, YMFB B.subtilis ortholog [Clostridium acetobutylicum ATCC 824] gi|325509225|gb|ADZ20861.1| Periplasmic serine protease [Clostridium acetobutylicum EA 2018] Length = 226 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 53/225 (23%) Query: 38 VARIAIRGQIEDS------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + +I G + +E+I R+ + + +++ L++ GG AG AI I+ Sbjct: 37 IGQIEGHGILSSQTKTTKYEEIIPRLMNVEYNPEIKGVLIILNTIGGDVEAGLAIAEMIR 96 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-----------LVGSIGVLFQYPY 140 + KP ++ V S G ++ +SN + T+ L+ IGV + Y Sbjct: 97 SLS--KPTVSLVIGGGHSIGVPLATSSNYSFISPTATMIIHPIRMNGLI--IGVPQTFQY 152 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 ++ +S V++S +K E +E+ K +++ D+ Sbjct: 153 FNKMQER--ISEFIVRTSKIKKE--TLTELMLKTDELLNDM------------------- 189 Query: 201 YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 G I G +A K GLID VGG +E L L D + Sbjct: 190 ---------GTILIGKQAVKYGLIDSVGGIKEALSKLKELIEDST 225 >gi|300854510|ref|YP_003779494.1| putative protease [Clostridium ljungdahlii DSM 13528] gi|300434625|gb|ADK14392.1| predicted protease [Clostridium ljungdahlii DSM 13528] Length = 221 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 89/237 (37%), Gaps = 59/237 (24%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 S +V + ++ + I GQIE + +I + I D L+V L+ Sbjct: 18 GSVNVAEGRDNIQILPIIGQIEGHVNLSSETKTTKYEHVIPNLIAIENDKRVEGLLVVLN 77 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS------- 127 + GG AG AI I+ + KP ++ V S G ++ AS+ + ++ Sbjct: 78 TVGGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATASDYSFISPSATMIIHPI 135 Query: 128 ----LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +V IGV + Y ++ ++ V++S K +E+ + +++ D+ Sbjct: 136 RMSGMV--IGVPQTFEYFNKMQER--INEFIVRTS--KITGEKLTELMLQTDELLNDM-- 187 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I G +A + GLID VGG + L + Sbjct: 188 --------------------------GTILIGKQAVEQGLIDEVGGISQAINKLNEM 218 >gi|296451320|ref|ZP_06893060.1| ATP-dependent Clp protease proteolytic subunit [Clostridium difficile NAP08] gi|296880328|ref|ZP_06904291.1| ATP-dependent Clp protease proteolytic subunit [Clostridium difficile NAP07] gi|296259926|gb|EFH06781.1| ATP-dependent Clp protease proteolytic subunit [Clostridium difficile NAP08] gi|296428569|gb|EFH14453.1| ATP-dependent Clp protease proteolytic subunit [Clostridium difficile NAP07] Length = 252 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 39/221 (17%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I G+IE + +I + I + ++V L++ GG AG AI Sbjct: 55 ITIIGEIEGHFIGNPQKKATKYEHIIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAE 114 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + K V+T V + S G ++ A + A T+ + +P Sbjct: 115 LLN--STSKKVVTLVLGGSHSIGVPLATAGDYSFIAPTA------TMIIHP--------- 157 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + F +++Q ++ +S + V E + ++K ++S Sbjct: 158 -----VRTTGLVIGINETFEYFKKMQDRIIQFIIRTSNI--KKDVLE--KLMHEKDELVS 208 Query: 209 D-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 D G + G EA GLID VGG +E + L L + K Sbjct: 209 DVGSVLIGKEAVDYGLIDEVGGLKEALKKLRELIKESEEEK 249 >gi|76787240|ref|YP_329374.1| prophage LambdaSa04, ClpP endopeptidase [Streptococcus agalactiae A909] gi|76562297|gb|ABA44881.1| prophage LambdaSa04, ClpP endopeptidase (S14) family, non-peptidase homologue, putative [Streptococcus agalactiae A909] Length = 232 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + I GQI D E+ ++ + + + ++SPGG +A I+ + + Sbjct: 16 LRIEGQIADETWFGDEVTPQLFKNDLTSETGDITLWINSPGGDVFAAAQIYNMLMDYQGD 75 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V + +AASA +I+ A + + ++ + + + + Sbjct: 76 --VHVIIDGLAASAASVIAMAGTTVSMSPVAM------MMIH------------NPWTFA 115 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 K + +++ + ++Y + K L D W Sbjct: 116 QGEAKDMAKVIEMLGE-----IKESIINAYEL-------RTGLSRTKISHLMDSESWFNA 163 Query: 216 AEAKKVGLIDVV 227 +A ++G D V Sbjct: 164 KKAVELGFADKV 175 >gi|332158438|ref|YP_004423717.1| hypothetical protein PNA2_0797 [Pyrococcus sp. NA2] gi|331033901|gb|AEC51713.1| hypothetical protein PNA2_0797 [Pyrococcus sp. NA2] Length = 280 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 35/191 (18%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 72 SIEDSEEVLRAIRMAPKDKPID---LIIHTPGGLVLAATQIAKALKDHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQY--PYVKPFLDKLGVSI----KSVKSS 158 A S G LI+ A++ I+ +++G + L QY P + + K GV + + Sbjct: 127 YAMSGGTLIALAADKIIMDPHAVLGPVDPQLGQYPAPSIVRAVQKKGVDKVDDQTLILA- 185 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG--- 215 + + + D++ Y ++R + +L++GR WT Sbjct: 186 ------DVAEKAIKQVRDFIFDLLKDKYGE-----EKAREL----AEILTEGR-WTHDYP 229 Query: 216 ---AEAKKVGL 223 EA+K+GL Sbjct: 230 ITVEEARKLGL 240 >gi|121534385|ref|ZP_01666209.1| protein of unknown function DUF114 [Thermosinus carboxydivorans Nor1] gi|121307155|gb|EAX48073.1| protein of unknown function DUF114 [Thermosinus carboxydivorans Nor1] Length = 277 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 29/175 (16%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I D + L +PGG A E I A+ + + V V Sbjct: 67 IEDSEHILRAIRLTPDDMPID---LVLHTPGGLVLASEQIAHALMRHPAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G +I+ A++ IV +++G + L QYP +K+ K+ Sbjct: 122 AMSGGTMIALAADEIVMDCNAVLGPVDPQLGQYPAAS-----------ILKAVKQKSIDR 170 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLS----DGRIWT 214 +M D+ + + V+ S + +K L+ +GR WT Sbjct: 171 V-----DDNTLIMADIAEKAIKQVEDFVARLLSDKMDAEKARELAKMLTEGR-WT 219 >gi|253796902|gb|ACT35706.1| capsid protein [Wolbachia phage WO] gi|253796904|gb|ACT35707.1| capsid protein [Wolbachia phage WO] gi|253796906|gb|ACT35708.1| capsid protein [Wolbachia phage WO] Length = 141 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQS 236 V E Sbjct: 60 GVTTFFEFINK 70 >gi|324324387|gb|ADY19647.1| peptidase S14 ClpP [Bacillus thuringiensis serovar finitimus YBT-020] Length = 247 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 37/198 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 27 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNQLKQHSAE- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + I+ ++ + + + Sbjct: 86 -IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ-----------------A 121 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + E + ++ + + +SY FV ++ L W T Sbjct: 122 STFEYGNADLFEKTARDLRKIDSALAASYKKRFVG--------TDEELKQLLKDETWLTA 173 Query: 216 AEAKKVGLIDVVGGQEEV 233 EA +GL D + + E+ Sbjct: 174 EEAVALGLADEIADEIEI 191 >gi|229092690|ref|ZP_04223838.1| Peptidase S14 ClpP [Bacillus cereus Rock3-42] gi|228690717|gb|EEL44494.1| Peptidase S14 ClpP [Bacillus cereus Rock3-42] Length = 247 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 75/195 (38%), Gaps = 37/195 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 27 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNQLKQHSAE- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + I+ ++ + + + Sbjct: 86 -IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ-----------------A 121 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + E + ++ + + +SY FV ++ L W T Sbjct: 122 STFEYGNADLFEKTARDLRKIDSALAASYKKRFVG--------TDEELKQLLKDETWLTA 173 Query: 216 AEAKKVGLIDVVGGQ 230 EA +GL D + + Sbjct: 174 EEAVALGLADEIADE 188 >gi|57640065|ref|YP_182543.1| hypothetical protein TK0130 [Thermococcus kodakarensis KOD1] gi|57158389|dbj|BAD84319.1| hypothetical protein, conserved, DUF114 family [Thermococcus kodakarensis KOD1] Length = 280 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I RA+++ VI Sbjct: 72 SIEDSEEVLRAIRSAPKDKPID---LIIHTPGGLVLAATQIARALKEHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 127 YAMSGGTLIALAADKIIMDPNAVLG 151 >gi|222100633|ref|YP_002535201.1| periplasmic serine protease [Thermotoga neapolitana DSM 4359] gi|221573023|gb|ACM23835.1| periplasmic serine protease [Thermotoga neapolitana DSM 4359] Length = 327 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 26/167 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + + +PGG A E I RA++ K++ V V Sbjct: 115 IEDSEEVLRAIKLTPEDMPID---LIIHTPGGLVLAAEQIARALK--KHKGKVTVFVPHY 169 Query: 107 AASAGYLISCASNIIVAAETSLVGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ +V E +++G IG P + + K V+ + Sbjct: 170 AMSGGTLIALAADEVVMDENAVLGPLDPQIG-NMPAPSILAAVRKKDVN-------EVDD 221 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + +++ KA++ +++ V +P +K +++ Sbjct: 222 QTLILADIAEKAIRQIKEFVTEILKD---------KMPEEKAKEIAE 259 >gi|83590616|ref|YP_430625.1| hypothetical protein Moth_1781 [Moorella thermoacetica ATCC 39073] gi|83573530|gb|ABC20082.1| Protein of unknown function DUF114 [Moorella thermoacetica ATCC 39073] Length = 276 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 84/224 (37%), Gaps = 41/224 (18%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D + L +PGG A E I AI +K+ V V Sbjct: 67 IEDSEQILRAIRLTPDDMPID---LVLHTPGGLVLAAEQIAHAI--LKHPAKVTVYVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK-----PFLDKLGVSIKSVKSSPM 160 A S G LI+ A++ IV E +++G + L +YP DK + + + Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGEYPAASIIKVIEEKDKNKIDDRILILGD- 180 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----GRIWTG- 215 + + ++ V L++E + + L+ GR WT Sbjct: 181 ----------------IARKAMNQVRESLVELLAE--KMERQRAEELATVFSEGR-WTHD 221 Query: 216 -----AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 + K+GL G E++Q + S R + P Sbjct: 222 YPIGVDQLIKMGLPVKTGLPREIYQLMELYPQPASRRPSVQYVP 265 >gi|297622590|ref|YP_003704024.1| hypothetical protein Trad_0342 [Truepera radiovictrix DSM 17093] gi|297163770|gb|ADI13481.1| protein of unknown function DUF114 [Truepera radiovictrix DSM 17093] Length = 285 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 30/188 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ ++ I D S + + L +PGG A E I A+ +++ V V Sbjct: 68 IDDSEHVLRAIR--LTDKSVP-IDLVLHTPGGLVLAAEQIAEAL--LRHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV E +++G + L QYP K ++ K Sbjct: 123 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQYPAASLL--------KVLERKDPKDIDD 174 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIWTG------ 215 + Q + Y V L+ + K ++ G WT Sbjct: 175 QTLIFAD----VAQKALAQVYQTVVDLL-RHKGWDTAKVERVARQLSQG-TWTHDYPISV 228 Query: 216 AEAKKVGL 223 EA+++GL Sbjct: 229 TEARELGL 236 >gi|213585527|ref|ZP_03367353.1| protease 4 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 81 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 10/81 (12%) Query: 34 NSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 +A I G I D +E +I D A+++ ++SPGGS A E Sbjct: 1 TGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVNASE 60 Query: 85 AIFRAIQKVKNR-KPVITEVH 104 I + + KPV+ + Sbjct: 61 VIRAELAAARAAGKPVVVSMG 81 >gi|319757818|gb|ADV69760.1| ClpP protease family protein [Streptococcus suis JS14] Length = 231 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 39/206 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIE-RISRDDSATA---LIVSLSSPGGSAYA 82 + + ED+S + I GQI D + + ++ ++D + + ++SPGG +A Sbjct: 4 FWNFTEDDSGRT--LRIEGQIADETWFGDEVTPQVFKNDLHAGNGDITLWINSPGGDVFA 61 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ + K V + +AASA +I+ A + + ++ + + Sbjct: 62 AAQIYNMLMDYKGD--VHVVIDGLAASAASVIAMAGTTVSMSPVAM------MMIH---- 109 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + +V K + +++ + ++Y + Sbjct: 110 --------NPWTVAQGEAKDMQKVIEMLGE-----IKESIINAYEL-------RTGLSRT 149 Query: 203 KTLVLSDGRIWT-GAEAKKVGLIDVV 227 K L D W +A ++G D + Sbjct: 150 KLSHLMDSESWFNAKKAVELGFADKI 175 >gi|253796908|gb|ACT35709.1| capsid protein [Wolbachia phage WO] Length = 133 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y FV+L++ +RN+ ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 V E + + V + ++ + N + Sbjct: 60 GVTTFFEFINNHKSRSVSMTTDELIEENYRRE 91 >gi|124010064|ref|ZP_01694725.1| YqeZ [Microscilla marina ATCC 23134] gi|123983887|gb|EAY24287.1| YqeZ [Microscilla marina ATCC 23134] Length = 467 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%) Query: 29 SHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATA--LIVSLSSPGGSAYAGE 84 +VE V I IR +I S+ + +E + A ++V +++ GG + Sbjct: 38 DNVETGKTKVFVIKIRQEINPQVSRYVDIALEEAL---NLKADYIVVDMNTYGGRVDDAD 94 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 I + K KPV V++ AASAG LIS A + I + +G Sbjct: 95 YIRTKLLDFK--KPVWVFVNKNAASAGALISIACDKIYMQPGATIG 138 >gi|150390788|ref|YP_001320837.1| hypothetical protein Amet_3038 [Alkaliphilus metalliredigens QYMF] gi|149950650|gb|ABR49178.1| protein of unknown function DUF107 [Alkaliphilus metalliredigens QYMF] Length = 432 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 34/240 (14%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDS 65 ++ R L + L + V I I G+I + Q +++ ++ +D + Sbjct: 1 MRKRERFLIAILLIFAGLIMHTTAAPQEKIVYVIPIHGEIGPAVYQYMLDNLKVAEQDPN 60 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A++ + + GG + E + I+ + P I+ V+ A SAG L++ +++ + A+ Sbjct: 61 TVAVVFEIDTYGGRVDSAERMSYYIRN--SSVPTISFVNTKAESAGVLLTISADQVAMAQ 118 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 S +GS + P + L + + K +++V++S Sbjct: 119 GSTIGSAEPI---PNTEKSLSYW--VSELRTVAQQKGRDDQLVAAMADESIAIENVIES- 172 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 R + T EA K+GL D+V + L L V+ + Sbjct: 173 ----------GRLLNL------------TNQEALKLGLADLV--AADTLAVLEGLNVEYT 208 >gi|167037548|ref|YP_001665126.1| hypothetical protein Teth39_1135 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115963|ref|YP_004186122.1| hypothetical protein Thebr_1163 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856382|gb|ABY94790.1| protein of unknown function DUF107 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929054|gb|ADV79739.1| protein of unknown function DUF107 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 436 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 105/300 (35%), Gaps = 58/300 (19%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISR 62 + ++ T + L L F+ S + V + IRG ++ + ++R ++ Sbjct: 1 MRSRVGTFVIFLITALLFFSLFTNVSGLPKEKGEVLFVPIRGTVDPGMAKFVKRAVEEAK 60 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + A L+ +++PGG A I + I + + P V+ A SAG LI+ + + Sbjct: 61 ETEAALLVFEINTPGGLVDAAVEISQTI--LNSPVPTAAYVNSQATSAGVLIAISCENLY 118 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A S +G + ++V K + + + Sbjct: 119 MAPGSTIG--------------------AAETV-------------PKEEKTISYWRSKL 145 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRI-------------WTGAEAKKVGLIDVVGG 229 + + +E R ++D + T +A ++ L D + Sbjct: 146 EGA--------AERRGRDPRIVAAMADADVEIEGLKERGKILSLTAKKALELKLADGIAA 197 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + ++ +G D+ ++++K + + F ++ L I ++ + G A Sbjct: 198 DRKELLTVLGVG-DRDVKEVKPFFSERIASFVTSPFVAPMFLTIGFIGIITEVLTPGFGA 256 >gi|312876235|ref|ZP_07736222.1| protein of unknown function DUF114 [Caldicellulosiruptor lactoaceticus 6A] gi|311797050|gb|EFR13392.1| protein of unknown function DUF114 [Caldicellulosiruptor lactoaceticus 6A] Length = 269 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 33/189 (17%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E+I I D S +I+ +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAIS--MTDPSVPLDIILH--TPGGLVLASLQIARAIKRHKGK--VTVHVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ IV A +++G + + ++P V + VK P+ Sbjct: 121 HAMSGGTLIALAADEIVMAPDAVLGPVDPQIGEFPAVSIL--------EVVKQKPIADID 172 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD----GRIWTG----- 215 + A + ++ D+ N P D ++ GR WT Sbjct: 173 DKTLILADVAKKALRQTKDAVLELLSG------NYPDDVAENIATQLVEGR-WTHDYPIT 225 Query: 216 -AEAKKVGL 223 +AK++GL Sbjct: 226 YEKAKELGL 234 >gi|217958120|ref|YP_002336664.1| Clp protease [Bacillus cereus AH187] gi|217064485|gb|ACJ78735.1| Clp protease [Bacillus cereus AH187] gi|282765831|gb|ADA84954.1| Clp protease [Bacillus phage 11143] Length = 248 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 37/198 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 28 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNQLKQHNAE- 86 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + I+ ++ + + + Sbjct: 87 -IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ-----------------A 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + E + ++ + + +SY FV ++ L W T Sbjct: 123 STFEYGNADLFEKTARDLRKIDSALAASYKKRFVG--------TDEELKQLLKDETWLTA 174 Query: 216 AEAKKVGLIDVVGGQEEV 233 EA +GL D + + E+ Sbjct: 175 EEAVALGLADEIADEIEI 192 >gi|157693039|ref|YP_001487501.1| serine peptidase [Bacillus pumilus SAFR-032] gi|157681797|gb|ABV62941.1| possible S49 family serine peptidase [Bacillus pumilus SAFR-032] Length = 437 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 5 LKKIKTRYVMLS-LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISR 62 +KKIK + S + ++ ++ D H I I +E + IER ++ Sbjct: 1 MKKIKISIALFSCFIICLLLGVQLTAKSVDQKVH--VIPIEDTVEKGLSKFIERSFEHAK 58 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + A +I+ +++PGG+ A I I+ + PV V+ A SAG ++ ++ I Sbjct: 59 SERAKHIILDINTPGGAVDAALEIADTIR--ASDIPVTAFVNHRALSAGAFLALNADQIY 116 Query: 123 AAETSLVG 130 +G Sbjct: 117 MTPNGKMG 124 >gi|46241427|gb|AAS82913.1| capsid protein [Wolbachia phage WO] gi|46241431|gb|AAS82915.1| capsid protein [Wolbachia phage WO] gi|46241433|gb|AAS82916.1| capsid protein [Wolbachia phage WO] gi|46241435|gb|AAS82917.1| capsid protein [Wolbachia phage WO] gi|46241437|gb|AAS82918.1| capsid protein [Wolbachia phage WO] gi|46241441|gb|AAS82920.1| capsid protein [Wolbachia phage WO] gi|46241443|gb|AAS82921.1| capsid protein [Wolbachia phage WO] gi|46241451|gb|AAS82925.1| capsid protein [Wolbachia phage WO] gi|46241453|gb|AAS82926.1| capsid protein [Wolbachia phage WO] gi|46241455|gb|AAS82927.1| capsid protein [Wolbachia phage WO] gi|46241465|gb|AAS82932.1| capsid protein [Wolbachia phage WO] gi|46241467|gb|AAS82933.1| capsid protein [Wolbachia phage WO] Length = 131 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y FV+L++ +RN+ + ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFVQLIARNRNLSIEAIKS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQ 235 V E Sbjct: 60 GVTTFFEFIN 69 >gi|228912077|ref|ZP_04075797.1| Peptidase S14 ClpP [Bacillus thuringiensis IBL 200] gi|228847580|gb|EEM92514.1| Peptidase S14 ClpP [Bacillus thuringiensis IBL 200] Length = 247 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 75/195 (38%), Gaps = 37/195 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 27 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNQLKQHDAE- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + I+ ++ + + + Sbjct: 86 -IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ-----------------A 121 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + E + ++ + + +SY FV ++ L W T Sbjct: 122 STFEYGNADLFEKTARDLRKIDSALAASYKKRFVG--------TDEELKQLLKDETWLTA 173 Query: 216 AEAKKVGLIDVVGGQ 230 EA +GL D + + Sbjct: 174 EEAVALGLADEIADE 188 >gi|58978319|gb|AAW83211.1| capsid protein [Wolbachia phage WO] Length = 136 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y FV+L++ +R++ +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFVQLIARNRSLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQS 236 V E Sbjct: 60 GVTTFFEFINK 70 >gi|229122186|ref|ZP_04251401.1| Peptidase S14 ClpP [Bacillus cereus 95/8201] gi|228661312|gb|EEL16937.1| Peptidase S14 ClpP [Bacillus cereus 95/8201] Length = 247 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 37/207 (17%) Query: 31 VEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E + ++ + G I S+ E + R +D A + V ++S GGSA+ G AI Sbjct: 18 FESKGENEYKLTVYGSIGGWFSENNAEVVRRKIQDVKAEKIHVHINSGGGSAFDGVAICN 77 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +++ +I + AASA +I+ A + I+ ++ + + Sbjct: 78 QLKQHSAE--IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ--------- 120 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVL 207 +S + + E + ++ + + +SY FV ++ L Sbjct: 121 --------ASTFEYGNADLFEKTARDLRKIDSALAASYKKRFVG--------TDEELKQL 164 Query: 208 SDGRIW-TGAEAKKVGLIDVVGGQEEV 233 W T EA +GL D + + E+ Sbjct: 165 LKDETWLTAEEAVALGLADEIADEIEI 191 >gi|220931947|ref|YP_002508855.1| periplasmic serine protease (ClpP class) [Halothermothrix orenii H 168] gi|219993257|gb|ACL69860.1| periplasmic serine protease (ClpP class) [Halothermothrix orenii H 168] Length = 265 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 24/160 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+++ + I + + L +PGG A E I AI+ K+ PV V Sbjct: 67 IEDSEQI---LRAIRSTPDEKPIDILLHTPGGLVLAAEQIAMAIK--KHPAPVRVIVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ I+ + +++G + + QYP VSI S+ K E Sbjct: 122 AMSGGTLIALAADEIIMDKNAVLGPVDPQIGQYPA---------VSILKTASTKNKDELD 172 Query: 166 P----FSEVNPKAVQMMQDVV-----DSSYHWFVRLVSES 196 ++V KAV +Q+ + D V V ++ Sbjct: 173 DETLILADVASKAVHQLQNFLYLLLEDRMEKEVVNRVVKN 212 >gi|148657205|ref|YP_001277410.1| hypothetical protein RoseRS_3097 [Roseiflexus sp. RS-1] gi|148569315|gb|ABQ91460.1| protein of unknown function DUF114 [Roseiflexus sp. RS-1] Length = 282 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 37/191 (19%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ ++ I+ RD + L +PGG A E I A++K + V V Sbjct: 67 IDDSEAVLRAIKMTDRDVPID---LVLHTPGGLVLAAEQIASALRKHPAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L Q P L++ Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQQPAASILKVLERK--------------- 166 Query: 164 PSPFSEVNPK---AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV--LSDGRIWTG--- 215 P SE++ + + + + + L+++ + + L+ G +WT Sbjct: 167 --PISEIDDETLIMADIAEKAIRQVKATVIELLADRMGAEPAEHIATMLATG-VWTHDYP 223 Query: 216 ---AEAKKVGL 223 EA+++GL Sbjct: 224 ISVREARELGL 234 >gi|182417555|ref|ZP_02948881.1| Clp protease [Clostridium butyricum 5521] gi|237668635|ref|ZP_04528619.1| Clp protease family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378568|gb|EDT76096.1| Clp protease [Clostridium butyricum 5521] gi|237656983|gb|EEP54539.1| Clp protease family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 241 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 91/235 (38%), Gaps = 55/235 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 ++ V + + + +++ GQIE + +I ++ I ++DS +++ L+ Sbjct: 38 GNTAVANPNRDIVVLSVIGQIEGHSVLPPQTKATKYEHIIPQLIEIEQNDSVKGVLIVLN 97 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV----- 129 + GG AG AI I + KP ++ V S G ++ +S+ ++ + Sbjct: 98 TVGGDVEAGLAIAEMINSMS--KPTVSIVIGGGHSIGVPLATSSDFSFITPSATMIVHPV 155 Query: 130 ---G-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 G IG+ + Y K ++ ++ V++S +K+ + ++ D Sbjct: 156 RMNGFVIGIAQTFEYFKKMQER--INDFIVRTSNIKS----------ETLEKFMLQTDDL 203 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + G + G +A GLID VGG E + L L Sbjct: 204 LNDV--------------------GTMLIGKQAVDCGLIDEVGGISEAIKKLREL 238 >gi|331699529|ref|YP_004335768.1| peptidase S14 ClpP [Pseudonocardia dioxanivorans CB1190] gi|326954218|gb|AEA27915.1| peptidase S14 ClpP [Pseudonocardia dioxanivorans CB1190] Length = 433 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 33/169 (19%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 +++ L+SPGG A+ G AI ++ + R V+ V MAASA +I+ A + +V Sbjct: 74 DVDQIVLHLNSPGGDAFEGVAIANVLRAHRAR--VVVRVDGMAASAASVIAMAGDEVVMG 131 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 IG N ++ +++ Sbjct: 132 -------IGSQMMVHDASG-----------YTWG------------NAAEIEAFLRRLNA 161 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE 232 + + + + W T EA GL D V +E Sbjct: 162 TSDSLAGTYAARAGGTVAEWRAVMQAETWYTPEEAVAAGLADRVATADE 210 >gi|298529223|ref|ZP_07016626.1| protein of unknown function DUF107 [Desulfonatronospira thiodismutans ASO3-1] gi|298510659|gb|EFI34562.1| protein of unknown function DUF107 [Desulfonatronospira thiodismutans ASO3-1] Length = 431 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 93/241 (38%), Gaps = 45/241 (18%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQE--LIERIERISRDDSATA 68 + + L ++ ++ FS D + H + ++ I G I + E L + + R D+ A Sbjct: 4 FKICFLASIILLAFSLVFADRDPASHQILKVDIDGPITPATEELLQDSLRRA-HDEDFIA 62 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQK-VKNRKPVITEV---HEMAASAGYLISCASNIIVAA 124 L++ L +PGG E++ ++ + + PVI V A SAG + AS+ V + Sbjct: 63 LMIRLDTPGGLV---ESMRNMVKDILASDLPVIVWVDPPGARATSAGVFLVAASDHAVMS 119 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 + +GS SP + + + MQ + + Sbjct: 120 PQTTIGS--------------------------------ASPVTMGGEEQDETMQSKIIN 147 Query: 185 SYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQ-EEVWQSLYALGV 242 VR V++ + + +++ EA ++ +ID + +++ L G+ Sbjct: 148 EMLSLVRTVAKDKGRNVEWYEKAVTEAANIDSEEALQLRVIDHIATSTDDLLSQLGKKGL 207 Query: 243 D 243 Sbjct: 208 S 208 >gi|126698922|ref|YP_001087819.1| translocation-enhancing protein TepA [Clostridium difficile 630] gi|254974868|ref|ZP_05271340.1| translocation-enhancing protein TepA [Clostridium difficile QCD-66c26] gi|255092255|ref|ZP_05321733.1| translocation-enhancing protein TepA [Clostridium difficile CIP 107932] gi|255100344|ref|ZP_05329321.1| translocation-enhancing protein TepA [Clostridium difficile QCD-63q42] gi|255306281|ref|ZP_05350452.1| translocation-enhancing protein TepA [Clostridium difficile ATCC 43255] gi|255313995|ref|ZP_05355578.1| translocation-enhancing protein TepA [Clostridium difficile QCD-76w55] gi|255516675|ref|ZP_05384351.1| translocation-enhancing protein TepA [Clostridium difficile QCD-97b34] gi|255649774|ref|ZP_05396676.1| translocation-enhancing protein TepA [Clostridium difficile QCD-37x79] gi|260682931|ref|YP_003214216.1| translocation-enhancing protein TepA [Clostridium difficile CD196] gi|260686529|ref|YP_003217662.1| translocation-enhancing protein TepA [Clostridium difficile R20291] gi|306519879|ref|ZP_07406226.1| translocation-enhancing protein TepA [Clostridium difficile QCD-32g58] gi|115250359|emb|CAJ68181.1| Protein export-enhancing factor [Clostridium difficile] gi|260209094|emb|CBA62253.1| translocation-enhancing protein TepA [Clostridium difficile CD196] gi|260212545|emb|CBE03509.1| translocation-enhancing protein TepA [Clostridium difficile R20291] Length = 244 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 39/221 (17%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I G+IE + +I + I + ++V L++ GG AG AI Sbjct: 47 ITIIGEIEGHFIGNPQKKATKYEHIIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAE 106 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + K V+T V + S G ++ A + A T+ + +P Sbjct: 107 LLN--STSKKVVTLVLGGSHSIGVPLATAGDYSFIAPTA------TMIIHP--------- 149 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + F +++Q ++ +S + V E + ++K ++S Sbjct: 150 -----VRTTGLVIGINETFEYFKKMQDRIIQFIIRTSNI--KKDVLE--KLMHEKDELVS 200 Query: 209 D-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 D G + G EA GLID VGG +E + L L + K Sbjct: 201 DVGSVLIGKEAVDYGLIDEVGGLKEALKKLRELIKESEEEK 241 >gi|46241445|gb|AAS82922.1| capsid protein [Wolbachia phage WO] Length = 141 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQS 236 V E Sbjct: 60 GVTTFFEFINK 70 >gi|295695466|ref|YP_003588704.1| protein of unknown function DUF114 [Bacillus tusciae DSM 2912] gi|295411068|gb|ADG05560.1| protein of unknown function DUF114 [Bacillus tusciae DSM 2912] Length = 276 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 24/166 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D + L +PGG A E I A++ V V Sbjct: 65 IEDSEQVLRAIRLTPDDMPID---LVLHTPGGLVLAAEQIAAALKAHPAD--VTVYVPHY 119 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV E +++G + L Q+P + ++ K Sbjct: 120 AMSGGTLIALAADRIVMDENAVLGPVDPQLGQWPAASIL--------RLTRTKEAKDI-- 169 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD 209 +M D+ + + H V+ + ++ L++ Sbjct: 170 ------DDETWIMADMAEKAIHQVREFVANLLREHFTDNQARDLAE 209 >gi|46241439|gb|AAS82919.1| capsid protein [Wolbachia phage WO] Length = 141 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQS 236 V E Sbjct: 60 GVTTFFEFINK 70 >gi|224823664|ref|ZP_03696773.1| peptidase S14 ClpP [Lutiella nitroferrum 2002] gi|224604119|gb|EEG10293.1| peptidase S14 ClpP [Lutiella nitroferrum 2002] Length = 238 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 78/233 (33%), Gaps = 44/233 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ + I+ + + ++SPGG + A+ AI+ ++ V+ ++ +AAS Sbjct: 48 AADFVKDLAAITA-PTIR---LHINSPGGDVFDARAMATAIRNHPSK--VVAQIDGLAAS 101 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A ++ +++ + A+ G + + + ++ + Sbjct: 102 AATYVALSADEVEIADG------GFFMIHRAWTLAMGN---------AGELRDTANLL-- 144 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVG 228 + + + Y ++ W T EA G +D +G Sbjct: 145 ------DKIDASISADYQ-------RKTGESAEQIDAWMGAETWFTAQEALDHGFVDRIG 191 Query: 229 GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 V ++ + + + P F + +E + ++++ Sbjct: 192 ASANVENHWNLSAYAKAPKALTERQPVSESVFD-------HAAMERRLGMLER 237 >gi|150390425|ref|YP_001320474.1| peptidase S14, ClpP [Alkaliphilus metalliredigens QYMF] gi|149950287|gb|ABR48815.1| peptidase S14, ClpP [Alkaliphilus metalliredigens QYMF] Length = 254 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 59/237 (24%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + ++ + + I G IE + +I ++ + ++ + ++V L+ Sbjct: 42 GTPNIPQMDQSIHVLTIIGHIEGHMVAPPQNKSTKYEHVIPQLMTVEQNPNVEGMLVILN 101 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS------- 127 + GG AG A+ I + KP +T V S G ++ A + A ++ Sbjct: 102 TAGGDVEAGLALSELINTLS--KPTVTLVLGGGHSIGVPLATAGDYSFIAPSATMTIHPI 159 Query: 128 -LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + G IGV + Y D++ + S+ K Sbjct: 160 RMTGLVIGVPQTFQYFSKMQDRI-IDFVVNNSNVDKDI---------------------- 196 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 F+ L + T L++ G I G +A K LID VGG + L L Sbjct: 197 ---FIEL--------MNTTDELANDVGTILIGEDAVKHKLIDEVGGLDRAMAKLREL 242 >gi|319644956|ref|ZP_07999189.1| YqeZ protein [Bacillus sp. BT1B_CT2] gi|317392765|gb|EFV73559.1| YqeZ protein [Bacillus sp. BT1B_CT2] Length = 439 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSH--VEDNSPHVARIAIRGQIEDS-QELIERIERISRDD 64 +K + ++L V++ H V+ + V I I +E + +ER + + D Sbjct: 3 LKKFRIFVALACGFVLFLLLGVHLTVKADGDTVYVIPIEETVEKGLSKFLERSFQEAEDM 62 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 +A +I+ +++PGG+ A + I + PV V+ A SAG ++ ++ I A Sbjct: 63 NAKHIILDINTPGGAVDAVLDMADTIHN--SDIPVTAYVNRRALSAGAYLALNADDIYMA 120 Query: 125 ETSLVG 130 +G Sbjct: 121 PGGKMG 126 >gi|197303368|ref|ZP_03168407.1| hypothetical protein RUMLAC_02090 [Ruminococcus lactaris ATCC 29176] gi|197297366|gb|EDY31927.1| hypothetical protein RUMLAC_02090 [Ruminococcus lactaris ATCC 29176] Length = 259 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 58/249 (23%) Query: 38 VARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + I G+IE + L+ R+ +D +++ L++ GG AG Sbjct: 47 IQLLTIIGEIEGHENVSGNTKATKYEHLLPRLAEAEENDEIEGVLILLNTMGGDVEAGLG 106 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL-----VGS----IGVLF 136 I I + KP ++ V + S G ++ +++ + V S IGV+ Sbjct: 107 IAEMIASL--GKPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTMIIHPVRSSGMFIGVIQ 164 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Y ++ D++ + + S + ++++ ++DS+ V+ V Sbjct: 165 SYRNMERTQDRI---TRFIASHSHIS-----------QERIVELMLDST--QLVKDV--- 205 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 G + G EA + G+ID VGG E +Q L+ L +D+ RK K P Sbjct: 206 -------------GTMLEGEEAVREGMIDEVGGIHEAFQKLHEL-IDEERRKKKQEKP-- 249 Query: 257 NYWFCDLKN 265 +++F D K Sbjct: 250 DHFFDDTKK 258 >gi|329924034|ref|ZP_08279297.1| nodulation efficiency protein NfeD [Paenibacillus sp. HGF5] gi|328940873|gb|EGG37181.1| nodulation efficiency protein NfeD [Paenibacillus sp. HGF5] Length = 453 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 3/122 (2%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATA 68 T V++ L+++ + S + N V I ++ IE +ER + +++ +A Sbjct: 14 TAAVVMMLISIGMYAAPMKSAMAANIGSVYVIPVKQPIERGLTSFMERGFKEAKEMAAGL 73 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 +++ + +PGG I ++ + P++ + AASAG I+ ++ I +E S+ Sbjct: 74 IVLEIDTPGGLVDQAGEIATLMKD--SEIPIVAYITGDAASAGSYIALNADKIAMSEGSM 131 Query: 129 VG 130 +G Sbjct: 132 IG 133 >gi|229061293|ref|ZP_04198642.1| Peptidase S14 ClpP [Bacillus cereus AH603] gi|228718018|gb|EEL69660.1| Peptidase S14 ClpP [Bacillus cereus AH603] Length = 247 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 37/195 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 27 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNLLKQHDAE- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + IV ++ + + + Sbjct: 86 -IIVHIDGWAASAASVIAMAGDKIVMPSNTM------MMIHQASTIEYGNADLF------ 132 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 E + ++ + + +SY FV E R + D W T Sbjct: 133 -----------EKTARDLRKIDSALAASYKKRFVGTDEELRQLLKD--------ETWLTA 173 Query: 216 AEAKKVGLIDVVGGQ 230 EA +GL D + + Sbjct: 174 EEAVALGLADEIADE 188 >gi|147678370|ref|YP_001212585.1| periplasmic serine proteases [Pelotomaculum thermopropionicum SI] gi|146274467|dbj|BAF60216.1| Periplasmic serine proteases [Pelotomaculum thermopropionicum SI] Length = 288 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I D + L +PGG A E I RA+QK + V V Sbjct: 77 IEDSEAVLRAIRLTPDDMPID---LVLHTPGGLVLASEQIARALQKHPAK--VTVFVPHY 131 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G +I+ A++ IV E +++G Sbjct: 132 AMSGGTMIALAADEIVMDENAVLG 155 >gi|226940692|ref|YP_002795766.1| ATP-dependent Clp protease proteolytic subunit [Laribacter hongkongensis HLHK9] gi|226715619|gb|ACO74757.1| ATP-dependent Clp protease proteolytic subunit [Laribacter hongkongensis HLHK9] Length = 252 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 74/207 (35%), Gaps = 41/207 (19%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALI--------VSLSSPGGSAYAGEAIFRAI 90 A I + I SQE + ++ + A+ + ++SPGGS +A A+ +A+ Sbjct: 31 AEIFLYDAIVSSQEEADWYGGVAPEAFVKAVRGIDAGTIHLRINSPGGSVFAARAMEQAL 90 Query: 91 QKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGV 150 ++ K R ++ + +AASA I+ A + IV + ++ + Sbjct: 91 REHKAR--IVVHIDGIAASAATFIAMAGDEIVMNKGAM------FMIH------------ 130 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + + + + + + + + + +Y ++ + Sbjct: 131 KAWTWTAG-NADDLAKEAGL----LAKIDGTLAQTY-------ADRTGKDVETINGWMAD 178 Query: 211 RIW-TGAEAKKVGLIDVVGGQEEVWQS 236 W T EA + G D + E + Sbjct: 179 ETWFTADEAVEYGFADKLAETEARAEW 205 >gi|146308985|ref|YP_001189450.1| peptidase S14, ClpP [Pseudomonas mendocina ymp] gi|145577186|gb|ABP86718.1| peptidase S14, ClpP [Pseudomonas mendocina ymp] Length = 216 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 34/192 (17%) Query: 38 VARIAIRGQIEDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 A I + I D + E++ + RD + + ++SPGG + G A+ AI +++ Sbjct: 7 TAEIFLYDAIGDWYGIGAEQVAQALRDLQGRDVALRINSPGGDVFDGRAMATAIS--QHK 64 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V + +AASA ++ A++ + + G G F Sbjct: 65 GKVTAYIDGLAASAATYVALAADEV-----EIAG--GAFFMIHNAWTL------------ 105 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 F + ++ V DS ++R S++ ++ W + Sbjct: 106 ---NMGNADDFR----ETASLLDKVDDSIVADYIRKTSQA----DEQVRAWMKAETWFSA 154 Query: 216 AEAKKVGLIDVV 227 EA + G +D + Sbjct: 155 EEAVEHGFVDRL 166 >gi|225182027|ref|ZP_03735459.1| protein of unknown function DUF114 [Dethiobacter alkaliphilus AHT 1] gi|225167312|gb|EEG76131.1| protein of unknown function DUF114 [Dethiobacter alkaliphilus AHT 1] Length = 277 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 29/187 (15%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D + + +PGG A E I A++ ++ V V Sbjct: 71 IEDSEQVLRAIRYTPDDMPID---LLIHTPGGLVLASEQIANALKNHPSK--VTVFVPHY 125 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G +I+ A++ I+ +++G + + +YP V +K+ K Sbjct: 126 AMSGGTMIALAADEILMDGNAVLGPVDPQIGRYPAVS-----------ILKAVRAKDINE 174 Query: 166 PFSE---VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK--- 219 E + A + ++ V + Y + + E + L+ G+ WT A Sbjct: 175 VDDETLILYDVAEKAIKQVTNRVYEILLDRLGEE--KAREVAASLASGK-WTHDYAITCS 231 Query: 220 ---KVGL 223 ++GL Sbjct: 232 ELGEMGL 238 >gi|14591292|ref|NP_143370.1| nfeD protein [Pyrococcus horikoshii OT3] gi|3257935|dbj|BAA30618.1| 441aa long hypothetical nfeD protein [Pyrococcus horikoshii OT3] Length = 441 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 8/127 (6%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSLS 74 L+++ V+ F S + N +VA+I +GQI + + +R I+ D+A A+I+ L Sbjct: 4 ILLSMIVLIFLASPILAKNIVYVAQI--KGQITSYTYDQFDRYITIAEQDNAEAIIIELD 61 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAETSLVGS 131 +PGG A A I + IQ +++ PVI V AASAG I+ S++I A + +G+ Sbjct: 62 TPGGRADAMMNIVQRIQ--QSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGA 119 Query: 132 IGVLFQY 138 + Y Sbjct: 120 CRPILGY 126 >gi|300853555|ref|YP_003778539.1| phage related protease [Clostridium ljungdahlii DSM 13528] gi|300433670|gb|ADK13437.1| phage related protease [Clostridium ljungdahlii DSM 13528] Length = 279 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 40/218 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS----QELIERIERISRDD--SATALIVSLSSPGGSA 80 W+ + ++NS + + G I DS E+ + + D L V ++S GG Sbjct: 8 WTFNAKENSDE-GELLLYGDISDSTWWGDEITPKNFKEELDSLGDIKTLNVYINSGGGDV 66 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +AG+AI+ +++ V V +AAS +I+ A + + + ++ L + Sbjct: 67 FAGQAIYSMLKRHSAT--VNVYVDGLAASIASIIAMAGDSVKMPKNAM------LMVH-- 116 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + S K + + D +D + + + + Sbjct: 117 ----------NPWSYAMGNAKDF------------RKLADDLDKVRESMISVYEDKTGME 154 Query: 201 YDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + + L D W T EA + G D + +++V SL Sbjct: 155 KESIVELLDAETWMTAEEAVEFGFADEIEEEKQVAASL 192 >gi|261405606|ref|YP_003241847.1| hypothetical protein GYMC10_1757 [Paenibacillus sp. Y412MC10] gi|261282069|gb|ACX64040.1| protein of unknown function DUF107 [Paenibacillus sp. Y412MC10] Length = 453 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 63/132 (47%), Gaps = 5/132 (3%) Query: 2 EFVLKKIKTRYVMLSLVTLTVVYFS--WSSHVEDNSPHVARIAIRGQIEDS-QELIERIE 58 + +++ T + ++ +++ ++ S + N V I ++ IE +ER Sbjct: 4 KLWMRRFLTLTAAVVMMLISIGMYAAPMKSAMAANIGSVYVIPVKQPIERGLTSFMERGF 63 Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + +++ +A +++ + +PGG I ++ + P++ + AASAG I+ + Sbjct: 64 KEAKEMAAGLIVLEIDTPGGLVDQAGEIATLMK--GSEIPIVAYITGDAASAGSYIALNA 121 Query: 119 NIIVAAETSLVG 130 + I +E S++G Sbjct: 122 DKIAMSEGSMIG 133 >gi|90419399|ref|ZP_01227309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aurantimonas manganoxydans SI85-9A1] gi|90336336|gb|EAS50077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aurantimonas manganoxydans SI85-9A1] Length = 210 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 37/202 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G IEDS + ++ + ++ + + ++SPGG +G AI+ +Q +K Sbjct: 37 VIFITGPIEDSMATLVCAQLLFLEAENPKKEIALYINSPGGVVTSGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ CA ++ A + + + F Sbjct: 96 -VSTLCIGQAASMGSLLLCAGHKDMRFATPNAR------IMVHQPSGGF----------- 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S E + + + ++ ++ Y E Y+ D + T Sbjct: 138 -SGQASDI-----ERHAQDIIKLKRRLNEVY-------VEHTGQDYETVERTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQS 236 EA++ GLID V + ++ Sbjct: 185 AQEAREFGLIDKVYSSRDALEA 206 >gi|328949699|ref|YP_004367034.1| protein of unknown function DUF114 [Marinithermus hydrothermalis DSM 14884] gi|328450023|gb|AEB10924.1| protein of unknown function DUF114 [Marinithermus hydrothermalis DSM 14884] Length = 280 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I +D + L +PGG A E I A+++ + V V Sbjct: 68 IDDSEQVLRAIRMTDKDVPID---LVLHTPGGLVLAAEQIAEALKRHPAK--VTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV E +++G Sbjct: 123 AMSGGTLIALAADEIVMDENAVLG 146 >gi|313575379|emb|CBR26908.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 236 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 39/206 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQELIERIE-RISRDDSATA---LIVSLSSPGGSAYA 82 + + ED+S + I GQI + + + ++ ++D + + ++SPGG +A Sbjct: 9 FWNFTEDDSGRT--LRIEGQIAEETWFGDEVTPQVFKNDLHAGSGDITLWINSPGGDVFA 66 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ + K V + +AASA +I+ A + + ++ + + Sbjct: 67 AAQIYNMLMDYKGD--VHVVIDGLAASAASVIAMAGTTVSMSPVAM------MMIH---- 114 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + +V K + +++ + ++Y + Sbjct: 115 --------NPWTVAQGEAKDMQKVIEMLGE-----IKESIINAYEL-------RTGLSRT 154 Query: 203 KTLVLSDGRIWT-GAEAKKVGLIDVV 227 K L D W +A ++G D + Sbjct: 155 KLSHLMDSESWFNAKKAVELGFADKI 180 >gi|307719554|ref|YP_003875086.1| periplasmic serine protease [Spirochaeta thermophila DSM 6192] gi|306533279|gb|ADN02813.1| periplasmic serine protease [Spirochaeta thermophila DSM 6192] Length = 284 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 41/193 (21%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ ++ I+ DD + + L +PGG A E I A++K + V V Sbjct: 67 IDDSEAVLRAIK--MTDDDVP-IDLILHTPGGLVVAAEQIAYALKKHPAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ +V E +++G + + Q P L++ Sbjct: 122 AMSGGTLIALAADEVVMDENAVLGPVDPQIGQQPAASILKVLERK--------------- 166 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS---ESRNIPYDKTLVLSDGRIWTGA---- 216 P +EV+ + + ++ DV + + R+V E R +P DK ++ R+ TG Sbjct: 167 --PIAEVDDETI-ILADVAEKAICQVKRVVKTLLEGR-LPGDKAEEIAT-RLATGEFTHD 221 Query: 217 ------EAKKVGL 223 EA+++GL Sbjct: 222 YPITVDEARELGL 234 >gi|261403256|ref|YP_003247480.1| protein of unknown function DUF114 [Methanocaldococcus vulcanius M7] gi|261370249|gb|ACX72998.1| protein of unknown function DUF114 [Methanocaldococcus vulcanius M7] Length = 278 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 18/170 (10%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + + +PGG A A E I A+++ K + VI + Sbjct: 67 TIEDSEEILRAIRLTPEDMPID---LIIHTPGGLALASEQIALALKEHKAKTTVI--IPH 121 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ + +++G + + QYP + + ++ Sbjct: 122 YAMSGGSLIALAADEILIDKNAVMGPVDPQIGQYPAAS-------ILETYYRKGEKVSDE 174 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + + + + ++ + + Y E D L++GR WT Sbjct: 175 TLI--LVDISKKAIKQMYEFVYELLKDRYGEE--KSKDIAKKLTEGR-WT 219 >gi|229181873|ref|ZP_04309181.1| Peptidase S14 ClpP [Bacillus cereus 172560W] gi|228601671|gb|EEK59184.1| Peptidase S14 ClpP [Bacillus cereus 172560W] Length = 247 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 37/198 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 ++ + G I S+ E + R +D A + V ++S GGSA+ G AI +++ Sbjct: 27 KLTVYGSIGGWFSENNAEAVRRKIQDVKAEKIHVHINSGGGSAFDGVAICNQLKQHSAE- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 +I + AASA +I+ A + I+ ++ + + + Sbjct: 86 -IIVHIDGWAASAASVIAMAGDKIIMPSNTM------MMIHQ-----------------A 121 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + E + ++ + + +SY FV ++ L W T Sbjct: 122 STFEYGNADLFEKTARNLRKIDSALAASYKKRFVG--------TDEELKQLLKDETWLTA 173 Query: 216 AEAKKVGLIDVVGGQEEV 233 EA +GL D + + E+ Sbjct: 174 EEAVALGLADEIADEIEI 191 >gi|218262799|ref|ZP_03477157.1| hypothetical protein PRABACTJOHN_02837 [Parabacteroides johnsonii DSM 18315] gi|218223131|gb|EEC95781.1| hypothetical protein PRABACTJOHN_02837 [Parabacteroides johnsonii DSM 18315] Length = 460 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 113/272 (41%), Gaps = 37/272 (13%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD-SATALIV 71 + L+++ + + F S + P V +I I+ +I ++ L R + A A+++ Sbjct: 7 LFLAIILVQIAPFI--SAADTLHPLVYKIDIKKEISNTTRLYLRGGLAEANALGADAVLI 64 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 +++ GG A +++ AI + N PV + AASAG LIS A I + + +G+ Sbjct: 65 HMNTYGGQVDAADSMRTAI--LYNSIPVYVFIDNNAASAGALISIACKKIYMRKGANIGA 122 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV----DSSYH 187 V+ Q + + P K + S + A QD + D+ Y Sbjct: 123 ATVVNQ----------------TGAAMPDKYQSYMRSMMRSTAEAHGQDTIIQKNDTLYK 166 Query: 188 WFVR-LVSESR-NIPYDKTLVLSDGRI--WTGAEAKKVGLIDVVG-GQEEVWQSLYALGV 242 W L++E+ + ++ G++ +T EA+K G D + +EV Sbjct: 167 WKRDPLIAEAMVDERVAIPNLIDTGKVLTFTAQEAQKWGYCDGIAENPDEVITQYLG--- 223 Query: 243 DQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 +++ + P W DLK ++ + + Sbjct: 224 -YKDYEMRSYTP---SWQDDLKGFLMNPIFQS 251 >gi|154482770|ref|ZP_02025218.1| hypothetical protein EUBVEN_00447 [Eubacterium ventriosum ATCC 27560] gi|149736365|gb|EDM52251.1| hypothetical protein EUBVEN_00447 [Eubacterium ventriosum ATCC 27560] Length = 385 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 77/204 (37%), Gaps = 38/204 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQIED----SQELIERI--ERISRDDSATALIVSLSSPGGSA 80 + + V D + A + + G+I + E+ + + + + + V ++S GG Sbjct: 19 FWNFVPDEERNTAEMLLYGEISEYSWYGDEITPSVFNQELKDLGAVDEITVRINSGGGDV 78 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +A AI+ +++ K + + ++ ASA +I+ A + I + VG GV + Sbjct: 79 FAAVAIYTRLKEHKAK--ISVKIDGWCASAATIIAMAGDTIEIS----VG--GVFMIHDP 130 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + +G + + E+ + ++ + + Y Sbjct: 131 LAGL---IGYYNTT-------DLENIVKEL-----ETIKQSIVNCYMTVTD-------KS 168 Query: 201 YDKTLVLSD--GRIWTGAEAKKVG 222 ++ L G +TG EA + G Sbjct: 169 EEEIKSLMTNEGEWFTGEEAVEAG 192 >gi|291295936|ref|YP_003507334.1| hypothetical protein Mrub_1552 [Meiothermus ruber DSM 1279] gi|290470895|gb|ADD28314.1| protein of unknown function DUF114 [Meiothermus ruber DSM 1279] Length = 279 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D S + + L +PGG A E I A+ +K+ V V Sbjct: 68 IDDSEQVLRAIR--MTDQSVP-IDLILHTPGGLVLAAEQIAEAL--LKHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV +++G Sbjct: 123 AMSGGTLIALAADEIVMDPNAVLG 146 >gi|289191994|ref|YP_003457935.1| protein of unknown function DUF114 [Methanocaldococcus sp. FS406-22] gi|288938444|gb|ADC69199.1| protein of unknown function DUF114 [Methanocaldococcus sp. FS406-22] Length = 278 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + + +PGG A A E I A+++ K + VI + Sbjct: 67 TIEDSEEILRAIRLTPEDMPID---LIIHTPGGLALASEQIALALKEHKAKTTVI--IPH 121 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIK 153 A S G LI+ A++ I+ + +++G + + QYP + G + Sbjct: 122 YAMSGGSLIALAADEIIMDKNAVMGPVDPQIGQYPAASILEAYYRKGEKVD 172 >gi|78044452|ref|YP_361259.1| hypothetical protein CHY_2465 [Carboxydothermus hydrogenoformans Z-2901] gi|77996567|gb|ABB15466.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901] Length = 280 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 37/191 (19%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D + L +PGG A E I A++K + V + Sbjct: 72 IEDSEQILRAIRLTPDDMPID---LVLHTPGGLVLAAEQIAEALRKHPAK--VTVFIPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV E ++ G + L +YP + + P K Sbjct: 127 AMSGGTLIALAADEIVMDENAVAGPVDPQLGEYPAAS-------ILKVVEQKGPDKV--- 176 Query: 166 PFSEVNPKAVQMMQDVV-DSSYHWFVRLVSE--SRNIPYDKTLVLS----DGRIWT---- 214 + ++ + + V E S + +K ++ G WT Sbjct: 177 -------EDRTLIMADIAKKALAQVENTVVELLSDKMDLEKAREVAKLLSQG-TWTHDYP 228 Query: 215 --GAEAKKVGL 223 + K++GL Sbjct: 229 ISAQQLKELGL 239 >gi|317121875|ref|YP_004101878.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermaerobacter marianensis DSM 12885] gi|315591855|gb|ADU51151.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermaerobacter marianensis DSM 12885] Length = 347 Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 55/243 (22%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + V + P + + I GQ+E + +I ++ + ++ + L+V L+ Sbjct: 58 GTDRVPQSPPDIHVLTIVGQVEGHLQLPAQNKTTKYEHIIPQLVAVEQNPAIKGLLVILN 117 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG A+ I+ + KP ++ V S G I+ A++I A T+ Sbjct: 118 TVGGDVEAGLALAELIRSLS--KPKVSIVLGGGHSIGVPIAVAADISFIAPTA------T 169 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P + + + + + + MQ+ + +R V Sbjct: 170 MTIHP----------IRLTGLVIGV---------PQSYEYLDKMQERI-------IRFVV 203 Query: 195 ESRNIPYDKTLVL--SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 E+ I D+ L G + G +A + GLID VGG + Q L L Sbjct: 204 ENSRISRDRFRELMFRTGELARDIGTVLVGEDAVREGLIDEVGGLAQAVQRLNQLIAQHQ 263 Query: 246 IRK 248 R+ Sbjct: 264 ARR 266 >gi|20807828|ref|NP_622999.1| protease subunit of ATP-dependent Clp protease [Thermoanaerobacter tengcongensis MB4] gi|20516388|gb|AAM24603.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter tengcongensis MB4] Length = 239 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 43/206 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I + S ++V L++ GG AG AI I + KP ++ V S Sbjct: 65 EHIIPQLVAIEENPSIKGVLVLLNTVGGDVEAGLAIAEMIASLS--KPTVSIVLGGGHSI 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ ++N ++ + +P + + + Sbjct: 123 GVPLAVSANYSYIVPSA------TMTIHP----------IRMTGLVVGV----------- 155 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-------KTLVLSD--GRIWTGAEAKKV 221 P+ + D V + + I + KT L++ G I G EA Sbjct: 156 -PQTFDYFNKMQDRI----VEFIVRNSKIKRETFMSLMLKTGELANDIGTILVGKEAVDY 210 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIR 247 GLID +GG +E + L+ L ++ + Sbjct: 211 GLIDEIGGIKEALKKLHKLIEEREKK 236 >gi|254479114|ref|ZP_05092466.1| Clp protease [Carboxydibrachium pacificum DSM 12653] gi|214034963|gb|EEB75685.1| Clp protease [Carboxydibrachium pacificum DSM 12653] Length = 238 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 43/206 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I + S ++V L++ GG AG AI I + KP ++ V S Sbjct: 64 EHIIPQLVAIEENPSIKGVLVLLNTVGGDVEAGLAIAEMIASLS--KPTVSIVLGGGHSI 121 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ ++N ++ + +P + + + Sbjct: 122 GVPLAVSANYSYIVPSA------TMTIHP----------IRMTGLVVGV----------- 154 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-------KTLVLSD--GRIWTGAEAKKV 221 P+ + D V + + I + KT L++ G I G EA Sbjct: 155 -PQTFDYFNKMQDRI----VEFIVRNSKIKRETFMSLMLKTGELANDIGTILVGKEAVDY 209 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIR 247 GLID +GG +E + L+ L ++ + Sbjct: 210 GLIDEIGGIKEALKKLHKLIEEREKK 235 >gi|325294896|ref|YP_004281410.1| hypothetical protein Dester_0704 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065344|gb|ADY73351.1| hypothetical protein Dester_0704 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 284 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+ ++ I D + + +PGG A A I A+ VK++ PV V Sbjct: 69 TIEDSERILRAIRMTPDDMPID---LIVHTPGGLALAATQIASAL--VKHKSPVRVIVPH 123 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV +++G Sbjct: 124 YAMSGGTLIALAADEIVMDPNAVLG 148 >gi|240102505|ref|YP_002958814.1| hypothetical protein TGAM_0448 [Thermococcus gammatolerans EJ3] gi|239910059|gb|ACS32950.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 280 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +EDS+E++ I +D + + +PGG A I RA+++ VI Sbjct: 72 SVEDSEEILRAIRAAPKDKPID---LIIHTPGGLVLAATQIARALKEHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 127 YAMSGGTLIALAADRIIMDPNAVLG 151 >gi|229150843|ref|ZP_04279055.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus m1550] gi|228632632|gb|EEK89249.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus m1550] Length = 254 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 62/177 (35%), Gaps = 33/177 (18%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +I + D + L+VS++SPGG + G I+ A++ V ++ +AASA +I+ Sbjct: 26 KISKALEDANGDDLVVSINSPGGYVHEGSEIYTALKNYPGH--VEVQIVGLAASAASVIA 83 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ + + T+ + + G + + Sbjct: 84 MAADKVRISPTA------QIMIH----NASMWNG--------GDYRDMSKAAEMLKTTDR 125 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQE 231 ++ V S ++ L + W G +A + +D + + Sbjct: 126 AIVNAYVIKS------------GKSEEELLNMMAEETWMGPQQALENNFVDEIMFMD 170 >gi|257469574|ref|ZP_05633666.1| putative Clp protease [Fusobacterium ulcerans ATCC 49185] gi|317063812|ref|ZP_07928297.1| predicted protein [Fusobacterium ulcerans ATCC 49185] gi|313689488|gb|EFS26323.1| predicted protein [Fusobacterium ulcerans ATCC 49185] Length = 252 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%) Query: 30 HVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +++ S A + I G IE DS + I+ + + + L + ++S GGS +AG Sbjct: 19 ELKNKSETKAELLIYGDIESDKWADSDVTPKEIKDLLDEANGKELDIYINSGGGSVFAGI 78 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 AI+ +++ K V +AASA I+ A + I+ + + Sbjct: 79 AIYNMLKRYSGVKTVYV--DGLAASAASFIAMAGDTIIVPKNA 119 >gi|152940719|gb|ABS44859.1| capsid protein [Wolbachia phage WO] Length = 134 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q V Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVGRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQ 235 V E Sbjct: 60 GVTTFFEFIN 69 >gi|325263865|ref|ZP_08130598.1| Clp protease [Clostridium sp. D5] gi|324030903|gb|EGB92185.1| Clp protease [Clostridium sp. D5] Length = 242 Score = 70.2 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 55/238 (23%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 E ++ + I G+IE + LI R+ +D +++ L++ GG Sbjct: 31 ESGRHNIQLMTIIGEIEGHEAVSGNTKATKYEHLIPRLAEAEDNDDIEGILILLNTLGGD 90 Query: 80 AYAGEAIFRAIQKVKNRKPVITEV--------HEMAASAGYLISCASNIIVAAETSLVGS 131 AG AI I + KP ++ V +A SA Y S ++ G Sbjct: 91 VEAGLAIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTMIVHPVRSTGM 148 Query: 132 -IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 IGV+ Y ++ D++ + + S S + + ++ + ++DSS V Sbjct: 149 FIGVIQSYRNMEKTQDRI---TRFIAS---------HSNITQERLEKL--MLDSS--QLV 192 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + V G + G EA K GLID VGG + L+++ D+ + Sbjct: 193 KDV----------------GTLLEGEEAVKEGLIDEVGGISQALSKLHSMIEDRKKEE 234 >gi|260892139|ref|YP_003238236.1| protein of unknown function DUF114 [Ammonifex degensii KC4] gi|260864280|gb|ACX51386.1| protein of unknown function DUF114 [Ammonifex degensii KC4] Length = 278 Score = 70.2 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D +++ +PGG A E I RA++K + V V Sbjct: 69 IEDSEQILRAIRYTPPDMPID-ILLH--TPGGLVLAAEQIARALRKHPAK--VTVFVPHY 123 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G +I+ A++ IV E +++G Sbjct: 124 AMSGGTMIALAADEIVMDENAVLG 147 >gi|254171900|ref|ZP_04878576.1| periplasmic serine protease [Thermococcus sp. AM4] gi|214033796|gb|EEB74622.1| periplasmic serine protease [Thermococcus sp. AM4] Length = 280 Score = 70.2 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +EDS+E++ I +D + + +PGG A I RA+++ VI Sbjct: 72 SVEDSEEILRAIRAAPKDKPID---LIIHTPGGLVLAATQIARALKEHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 127 YAMSGGTLIALAADRIIMDPNAVLG 151 >gi|46579912|ref|YP_010720.1| ClpP protease family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449328|gb|AAS95979.1| ClpP protease family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234088|gb|ADP86942.1| peptidase S14 ClpP [Desulfovibrio vulgaris RCH1] Length = 244 Score = 70.2 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 37/204 (18%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 ++ + + I+ + + ++SPGG +A + AI+ + VI V AA Sbjct: 47 SAEAFVRELNAITAST----IHLRINSPGGEVFAARCMEAAIKGHPAK--VIAHVDGYAA 100 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA ++ A + ++ A G + V ++ + + Sbjct: 101 SAASFVAIACDDVLMAP-------GAFMM------------IHKAWVFTAGNSDDLIQTA 141 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + ++ + + +Y + W T EA + GL D + Sbjct: 142 SL----LEKLDGTLAETYSQKC-------GKSVSDMAEMMAAETWFTAQEAVEAGLADSI 190 Query: 228 GGQEEVWQSLYALGVDQSIRKIKD 251 Q+ + LGV + D Sbjct: 191 EESAPKAQANWNLGVYAKAPVVDD 214 >gi|254195020|ref|ZP_04901449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia pseudomallei S13] gi|254195945|ref|ZP_04902371.1| Clp protease [Burkholderia pseudomallei S13] gi|254197217|ref|ZP_04903639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia pseudomallei S13] gi|169651768|gb|EDS84461.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia pseudomallei S13] gi|169652690|gb|EDS85383.1| Clp protease [Burkholderia pseudomallei S13] gi|169653958|gb|EDS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia pseudomallei S13] Length = 366 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 80/209 (38%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + VA I I I D+Q + +++ + A+++ V+++S GG Sbjct: 7 WWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAAAA--DASSITVAINSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + AI+ A+++ + V V +AASA L+ A + I E +L L + Sbjct: 65 VFDAFAIYNALRRYAGK--VKGRVDGIAASAASLVLMACDEIEMPENAL------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 +V + K ++ + ++ V S + Sbjct: 116 -----------HPHTVAAGESKDLRRVAELLDNASAGILAAYVQRS------------GL 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D + D W T A+AK+ G DV+ Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181 >gi|52787302|ref|YP_093131.1| hypothetical protein BLi03615 [Bacillus licheniformis ATCC 14580] gi|52349804|gb|AAU42438.1| ClpP [Bacillus licheniformis ATCC 14580] Length = 243 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 36/207 (17%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDD-----SATALIVSLSSPGGSAYAGEAIFRA 89 + A I + G I E + + + +++ + ++SPGG + G+AI Sbjct: 18 NDSTAEITLYGSITGEGWFSESSSKAFQAELKSLGDVSSIDLYINSPGGDVFEGQAIHSM 77 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +Q+ K + + V +A S +I+ A + I ++ + + P++ +G Sbjct: 78 LQRHKAK--INVYVDALAGSIASVIAMAGDKITMPSNAM------MMIH---NPYMGMVG 126 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + K++ + + + + S+Y + L D Sbjct: 127 NAAEFRKAA--------------DDLDKITESIVSTYLA-----KAGDKLDDGTLRQLLD 167 Query: 210 GRIW-TGAEAKKVGLIDVVGGQEEVWQ 235 W T EA GLID V ++V Sbjct: 168 EETWLTADEALNYGLIDEVSESKDVAA 194 >gi|212546731|ref|XP_002153519.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Penicillium marneffei ATCC 18224] gi|210065039|gb|EEA19134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Penicillium marneffei ATCC 18224] Length = 257 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 82/193 (42%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++ S ++ ++ + D+ A+ + ++SPGGS AG AI+ + +++ Sbjct: 78 IICLNGEVDETTSAAIVAQLLFLEADNPEKAIHLYINSPGGSVTAGLAIYDTMTYIQS-- 135 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + Sbjct: 136 PVHTICVGQAASMGSLLLCGGHAGKRYCLPHS---SI---MIHQ---------------- 173 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + S ++ K + ++ ++ Y R ++ + + D+ L + + G Sbjct: 174 PSGGYFGQASDI-AIHAKEILRVRTQLNQIYQ---RHLTGKKQLSLDEIEKLMERDYFMG 229 Query: 216 AE-AKKVGLIDVV 227 A+ A ++G++D + Sbjct: 230 AQEALEMGIVDEI 242 >gi|108803523|ref|YP_643460.1| hypothetical protein Rxyl_0678 [Rubrobacter xylanophilus DSM 9941] gi|108764766|gb|ABG03648.1| protein of unknown function DUF114 [Rubrobacter xylanophilus DSM 9941] Length = 279 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ ++ I D +++ +PGG A I A+ + + PV V Sbjct: 67 IDDSEGVLNAIRETPSDGPID-IVLH--TPGGMVLAASQIAEALAEHRG--PVRAFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I + +G Sbjct: 122 AMSGGTLIALAADEIHVDPHAALG 145 >gi|77411264|ref|ZP_00787614.1| ClpP protease family protein [Streptococcus agalactiae CJB111] gi|77162690|gb|EAO73651.1| ClpP protease family protein [Streptococcus agalactiae CJB111] Length = 232 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 37/192 (19%) Query: 41 IAIRGQIEDSQELIERIE-RISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + I GQI D + + + ++D + + + ++SPGG +A I+ + + Sbjct: 16 LRIEGQIADETWFGDEVTPQQFKNDLISGTGDITLWINSPGGDVFAAAQIYNMLMDYQGD 75 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V + +AASA +I+ A + + ++ + + + + Sbjct: 76 --VHVIIDGLAASAASVIAMAGTTVSMSPVAM------MMIH------------NPWTFA 115 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 K + +++ + ++Y + K L D W Sbjct: 116 QGEAKDMAKVIEMLGE-----IKESIINAYEL-------RTGLSRTKISHLMDSESWFNA 163 Query: 216 AEAKKVGLIDVV 227 +A ++G D V Sbjct: 164 KKAVELGFADKV 175 >gi|332800332|ref|YP_004461831.1| peptidase S14 ClpP [Tepidanaerobacter sp. Re1] gi|332698067|gb|AEE92524.1| peptidase S14 ClpP [Tepidanaerobacter sp. Re1] Length = 229 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 45/254 (17%) Query: 30 HVEDNSPHVARIAIRGQIEDS----QELIERIERISRDD--SATALIVSLSSPGGSAYAG 83 + ++ + + G+I + E+ + + D L + ++SPGG +AG Sbjct: 8 NFKNQDEKTGELTLYGEIASATWWGDEITPKEFKADLDGLGDIDTLNIYINSPGGDVFAG 67 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 +AI+ +++ K K V + +AAS +++ A + I + + + Sbjct: 68 QAIYSMLKRHKAHKNVY--IDGLAASIASVVAMAGDTIFMPKNA-------MMMIHN--- 115 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 P F N + + + +D + E + D+ Sbjct: 116 --------------------PWTFGLGNADEFRKLAEDLDKIREGLIAAYEERSALTRDE 155 Query: 204 TLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 + + D W T E + G DVVG + K N PK Sbjct: 156 IIKIMDDETWLTADECFEYGFCDVVG------KEKQMAACIDKTLLTKYRNTPKELLSRL 209 Query: 263 LKNLSISSLLEDTI 276 + LL+ I Sbjct: 210 KPDEKKQELLKQKI 223 >gi|320161989|ref|YP_004175214.1| hypothetical protein ANT_25880 [Anaerolinea thermophila UNI-1] gi|319995843|dbj|BAJ64614.1| hypothetical protein ANT_25880 [Anaerolinea thermophila UNI-1] Length = 280 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 8/109 (7%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I+ D + + L +PGG A E I A+ + PV V Sbjct: 67 IDDSEQVLRAIK--LTDPKVP-IDIILHTPGGLVLAAEQIANALSRHPA--PVTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSI 152 A S G LI+ A+N IV E +++G + L QYP L++ ++ Sbjct: 122 AMSGGTLIALAANQIVMDENAVLGPVDPQLGQYPAASILKVLEQKDINR 170 >gi|313901853|ref|ZP_07835274.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermaerobacter subterraneus DSM 13965] gi|313467896|gb|EFR63389.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermaerobacter subterraneus DSM 13965] Length = 324 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 55/235 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + V + P + + I GQ+E + +I ++ + ++ + L+V L+ Sbjct: 59 GTDRVPQSPPDIHVLTIVGQVEGHLQLPAQNKTTKYEHIIPQLVAVEQNPAIKGLLVILN 118 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG A+ I+ + KP ++ V S G I+ A+++ A T+ Sbjct: 119 TVGGDVEAGLALAELIRSLS--KPKVSIVLGGGHSIGVPIAVAADVSFIAPTA------T 170 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P + + + + + + MQ+ + +R V Sbjct: 171 MTIHP----------IRLTGLVIGV---------PQSYEYLDKMQERI-------IRFVV 204 Query: 195 ESRNIPYDKTLVL--SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 E+ I D+ L G + G +A + GLID VGG + Q L L Sbjct: 205 ENSRISRDRFRELMFRTGELARDIGTVLVGEDAVREGLIDEVGGLAQAVQRLNQL 259 >gi|148269156|ref|YP_001243616.1| hypothetical protein Tpet_0011 [Thermotoga petrophila RKU-1] gi|281411454|ref|YP_003345533.1| protein of unknown function DUF114 [Thermotoga naphthophila RKU-10] gi|147734700|gb|ABQ46040.1| protein of unknown function DUF114 [Thermotoga petrophila RKU-1] gi|281372557|gb|ADA66119.1| protein of unknown function DUF114 [Thermotoga naphthophila RKU-10] Length = 284 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 30/169 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + L +PGG A E I RA++ K + V V Sbjct: 72 IEDSEEILRAIKLTPSDMPID---LILHTPGGLVLAAEQIARALKMHKGK--VTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G IG P + + K V+ Sbjct: 127 AMSGGTLIALAADEIIMDENAVLGPLDPQIG-NMPAPSILAAVKKKDVNEV--------- 176 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD 209 ++ D+ + + V E S +P +K ++D Sbjct: 177 ---------DDQTLILADIAEKAIRQVKEFVVEILSDKVPKEKAEEIAD 216 >gi|156742893|ref|YP_001433022.1| hypothetical protein Rcas_2943 [Roseiflexus castenholzii DSM 13941] gi|156234221|gb|ABU59004.1| protein of unknown function DUF114 [Roseiflexus castenholzii DSM 13941] Length = 279 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 37/191 (19%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ ++ I+ +D + L +PGG A E I A++K + V V Sbjct: 67 IDDSEAVLRAIKMTDKDVPID---LVLHTPGGLVLAAEQIASALRKHPAK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ IV E +++G + L Q P L++ Sbjct: 122 AMSGGTLIALAADEIVMDENAVLGPVDPQLGQQPAASILKVLERK--------------- 166 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD---GRIWTG--- 215 P SE++ + + +M D+ + + V E + I +K ++ +WT Sbjct: 167 --PISEIDDETL-IMADIAEKAIRQVKATVIELLADRIGAEKAEHIATMLATGVWTHDYP 223 Query: 216 ---AEAKKVGL 223 EA+++GL Sbjct: 224 ISVREARELGL 234 >gi|229083044|ref|ZP_04215449.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock4-2] gi|228700261|gb|EEL52842.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock4-2] Length = 234 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 33/177 (18%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +I + D + L+VS++SPGG + G I+ A++ V ++ +AASA +I+ Sbjct: 8 KISKALDDANGDDLVVSINSPGGYVHEGSEIYTALKNYPGH--VEVQIVGLAASAASVIA 65 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ + + T+ + + G + + Sbjct: 66 MAADKVRISPTA------QIMIH----NASMWNG--------GDHRDMSKAAEMLKTTDR 107 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQE 231 ++ V S ++ L + W G +A + +D + E Sbjct: 108 AIVNAYVIKS------------GKSEEELLNMMAEETWMGPQQALENNFVDEIMFME 152 >gi|150398272|ref|YP_001328739.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium medicae WSM419] gi|150029787|gb|ABR61904.1| Endopeptidase Clp [Sinorhizobium medicae WSM419] Length = 205 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 35/204 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + + + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDAVSALVCAQLLFLEAESPTKPIQLYINSPGGVVTSGFAMYDTMRYIRA-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + A + SI V + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEAGGRAALPNT---SILVHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ + +Y F R + D R T Sbjct: 148 RRTKHR------------MTRLYAEHCGRTYEEF------ERAMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYA 239 EA + GLID + + Sbjct: 182 EEALEWGLIDCILTERVAGAERDG 205 >gi|312128757|ref|YP_003993631.1| hypothetical protein Calhy_2572 [Caldicellulosiruptor hydrothermalis 108] gi|311778776|gb|ADQ08262.1| protein of unknown function DUF114 [Caldicellulosiruptor hydrothermalis 108] Length = 270 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 8/98 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E+I I D S +I+ +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAIN--MTDPSIPLDIILH--TPGGLVLASTQIARAIKRHKGK--VTVHVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK 142 A S G LI+ A++ IV +E +++G + + ++P V Sbjct: 121 YAMSGGTLIALAADEIVMSEDAVLGPVDPQIGEFPAVS 158 >gi|313673695|ref|YP_004051806.1| hypothetical protein Calni_1737 [Calditerrivibrio nitroreducens DSM 19672] gi|312940451|gb|ADR19643.1| hypothetical protein Calni_1737 [Calditerrivibrio nitroreducens DSM 19672] Length = 271 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+E++ I+ D + + + L +PGG A I RA++ K+ V V Sbjct: 67 IDDSEEVLRAIQ--MTDKNVP-IDIILHTPGGLVLASLQIARALK--KHPGKVTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVS 151 A S G LIS A++ IV +E +++G + L +YP L+K ++ Sbjct: 122 AMSGGTLISLAADEIVMSENAVLGPVDPQLGEYPAASILNLLEKKDIN 169 >gi|18977905|ref|NP_579262.1| nodulation protein nfeD [Pyrococcus furiosus DSM 3638] gi|18893669|gb|AAL81657.1| nodulation protein nfeD [Pyrococcus furiosus DSM 3638] Length = 447 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSL 73 + ++T+ + +S V I GQI + + +R I+ ++A A+I+ L Sbjct: 7 IMILTIFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNARAIIIEL 66 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAETSLVG 130 +PGG A I + IQ + + PVI V AASAG I+ +++I A + +G Sbjct: 67 DTPGGRGDAMMEIIQRIQ--QAKVPVIIYVYPPGASAASAGTYIALGAHLIAMAPGTSIG 124 Query: 131 SIGVLFQY 138 + + Y Sbjct: 125 ACRPILGY 132 >gi|225181409|ref|ZP_03734853.1| peptidase S14 ClpP [Dethiobacter alkaliphilus AHT 1] gi|225167990|gb|EEG76797.1| peptidase S14 ClpP [Dethiobacter alkaliphilus AHT 1] Length = 255 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 57/222 (25%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I GQIE + +I ++ I ++ L++ L++ GG AG AI Sbjct: 59 IPIIGQIEGHITLAPQNKTTKYEHVIPQLVAIEQNPKIEGLLIILNTVGGDVEAGLAIAE 118 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP-YVKPFLDK 147 + + KP ++ V S G I+ +++ ET+ + +P + + Sbjct: 119 MVDTLS--KPTVSLVLGGGHSIGVPIAVSADYSFITETA------TMTVHPIRLSGLV-- 168 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK---- 203 +GV + + MQD V ++ V++ + DK Sbjct: 169 IGV------------------PQTYEYLDKMQDRV-------IKFVTKHSRVTEDKFRHL 203 Query: 204 ---TLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 T L+ G + G +A K GLID VGG + Q L L Sbjct: 204 MFCTDQLARDIGTVMVGPDAVKDGLIDEVGGLAQAVQKLQEL 245 >gi|315645974|ref|ZP_07899095.1| hypothetical protein PVOR_11004 [Paenibacillus vortex V453] gi|315278735|gb|EFU42049.1| hypothetical protein PVOR_11004 [Paenibacillus vortex V453] Length = 453 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 59/130 (45%), Gaps = 5/130 (3%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSH--VEDNSPHVARIAIRGQIEDS-QELIERIERI 60 +++ T ++ +++ + + V N V I ++ QIE +ER + Sbjct: 6 WMRRFLTLTAAAVMILISIGMYFGPTKPAVAANVGSVYVIPVKQQIERGLTSFMERGFKE 65 Query: 61 SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI 120 + SA +++ + +PGG I ++ + P++ + AASAG I+ ++ Sbjct: 66 AEQMSAGLIVLEIDTPGGLVDQAGKIATLMKD--SNIPIVAYITGDAASAGSYIALNADK 123 Query: 121 IVAAETSLVG 130 I ++ S++G Sbjct: 124 IAMSDGSMIG 133 >gi|317121883|ref|YP_004101886.1| periplasmic serine protease [Thermaerobacter marianensis DSM 12885] gi|315591863|gb|ADU51159.1| periplasmic serine protease [Thermaerobacter marianensis DSM 12885] Length = 280 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 ++DS++++ I + + + +PGG A E I AI++ + PV V Sbjct: 72 TVDDSEQVLRAIRYTPPNMPID---LIVHTPGGLVLAAEQIAEAIRRHRG--PVTVMVPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I E +++G Sbjct: 127 YAMSGGTLIALAADQIWMDENAVLG 151 >gi|121535282|ref|ZP_01667096.1| peptidase S14, ClpP [Thermosinus carboxydivorans Nor1] gi|121306167|gb|EAX47095.1| peptidase S14, ClpP [Thermosinus carboxydivorans Nor1] Length = 260 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 88/249 (35%), Gaps = 59/249 (23%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALI 70 + SS V ++ + I GQIE + ++ +I I ++ L+ Sbjct: 44 IQVMGSSEVPTAKSNIHVMTIIGQIEGHMVLPPQNKTTKYEHVMPQIAAIEQNPDIEGLL 103 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + L++ GG AG AI I + KP ++ V G+ Sbjct: 104 LLLNTVGGDVEAGLAIAELIASLS--KPTVSLVLG----GGH------------------ 139 Query: 131 SIGV-LFQYPYVKPFLDKLGVSIKSVK-SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 SIGV + ++ ++I ++ + + PS F + + MQ+ ++ Sbjct: 140 SIGVPIAVSANYSFIVESASMTIHPIRLTGLVIGAPSSFDYL-----EKMQERIN----- 189 Query: 189 FVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R V I K L G + G +A + GLID +GG + L Sbjct: 190 --RFVVSHSKITEKKWKELLFKTGELSRDIGTNVVGRDAVRYGLIDELGGMAQAIAKLQE 247 Query: 240 LGVDQSIRK 248 L Q K Sbjct: 248 LIRTQKETK 256 >gi|52079942|ref|YP_078733.1| ATP-dependent Clp protease proteolytic subunit (class III heat-shock protein) [Bacillus licheniformis ATCC 14580] gi|52785314|ref|YP_091143.1| hypothetical protein BLi01550 [Bacillus licheniformis ATCC 14580] gi|52003153|gb|AAU23095.1| ATP-dependent Clp protease proteolytic subunit (class III heat-shock protein) [Bacillus licheniformis ATCC 14580] gi|52347816|gb|AAU40450.1| putative protein [Bacillus licheniformis ATCC 14580] Length = 248 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 41/220 (18%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ----ELIERIERISRDD--SATALIVSLSSPGGSA 80 W N I I +I +Q E+ + + D +AL + ++SPGGS Sbjct: 8 WEIKAAKNDAKTGEIYIYSEISSAQFWGDEVTTQTFKEDLDGLGEVSALNIYINSPGGSV 67 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + G +I+ I++ K V V +AAS +I+ + + I ++ + + Sbjct: 68 FEGNSIYNIIKRHKAH--VNVYVDGLAASIASVIAMSGDAIFMPANAM------MMIH-- 117 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV--SESRN 198 + +V N + ++ D +D + Sbjct: 118 ----------NPWTVAQG------------NAEELRKQADDMDRIRESLIEAYLGKAGEK 155 Query: 199 IPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + D+ + L D W T E ++GL D + + Sbjct: 156 LNRDRLIELMDAETWLTAQECLELGLCDSIEAPSAAVAKV 195 >gi|15669689|ref|NP_248502.1| hypothetical protein MJ_1495 [Methanocaldococcus jannaschii DSM 2661] gi|2496184|sp|Q58890|Y1495_METJA RecName: Full=Uncharacterized protein MJ1495 gi|1592131|gb|AAB99506.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 292 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + + +PGG A A E I A+++ K + VI + Sbjct: 81 TIEDSEEILRAIRLTPEDMPID---LIIHTPGGLALASEQIALALKEHKAKTTVI--IPH 135 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ I+ + +++G + + QYP Sbjct: 136 YAMSGGSLIALAADEIIMDKNAVMGPVDPQIGQYP 170 >gi|15606180|ref|NP_213557.1| hypothetical protein aq_814 [Aquifex aeolicus VF5] gi|2983372|gb|AAC06959.1| hypothetical protein aq_814 [Aquifex aeolicus VF5] Length = 288 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 23/167 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+ ++ I D + + +PGG A A I A+ VK++ PV V Sbjct: 74 TIEDSERVLRAIRMTPDDMPID---LIIHTPGGLALAATQIANAL--VKHKAPVRVIVPH 128 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G + + P L+K K Sbjct: 129 YAMSGGTLIALAADEIIMDENAVLGPVDPQIGNMPAASILKVLEKK----------DPKD 178 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + ++ +VD + + +K +++ Sbjct: 179 IDDQTLIMADVSEKAIKQMVDCLVDLLTKN-----GMDKEKAKKIAE 220 >gi|170287818|ref|YP_001738056.1| hypothetical protein TRQ2_0011 [Thermotoga sp. RQ2] gi|170175321|gb|ACB08373.1| protein of unknown function DUF114 [Thermotoga sp. RQ2] Length = 284 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 30/169 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + L +PGG A E I RA++ K + V V Sbjct: 72 IEDSEEILRAIKLTPSDMPID---LILHTPGGLVLAAEQIARALKMHKGK--VTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G IG P + + K V+ Sbjct: 127 AMSGGTLIALAADEIIMDENAVLGPLDPQIG-NMPAPSILAAVKKKDVNEV--------- 176 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD 209 ++ D+ + + V E S +P +K ++D Sbjct: 177 ---------DDQTLILADIAEKAIRQVKEFVVEILSDKVPKEKAEEIAD 216 >gi|289548220|ref|YP_003473208.1| hypothetical protein Thal_0447 [Thermocrinis albus DSM 14484] gi|289181837|gb|ADC89081.1| protein of unknown function DUF114 [Thermocrinis albus DSM 14484] Length = 287 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 19/164 (11%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + + +PGG A A I A+ + + PV V Sbjct: 76 TIEDSEQVLRAIRLTPPDMPID---LIVHTPGGLALAATQIANALARHRG--PVRVIVPH 130 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ +++G + + Q P L L + +K Sbjct: 131 YAMSGGTLIALAADEIIMDPNAVLGPVDPQIGQLPAAS-ILKVLEIK-------DVKDID 182 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + A + ++ + +V + S+ + +K ++ Sbjct: 183 DQTIVMADVARKAIEQM-----EQYVTYLLTSKGMDREKAQSIA 221 >gi|242399808|ref|YP_002995233.1| hypothetical protein TSIB_1833 [Thermococcus sibiricus MM 739] gi|242266202|gb|ACS90884.1| hypothetical protein TSIB_1833 [Thermococcus sibiricus MM 739] Length = 248 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I +D + + +PGG A I +A++ + VI + Sbjct: 40 SIEDSEEILRAIRMAPKDKPID---LIIHTPGGLVLAATQIAKALKDHPAKTRVI--IPH 94 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 95 YAMSGGTLIALAADEIIMDPHAVLG 119 >gi|52786465|ref|YP_092294.1| YqeZ [Bacillus licheniformis ATCC 14580] gi|163119554|ref|YP_079877.2| intermembrane protease YqeZ [Bacillus licheniformis ATCC 14580] gi|52348967|gb|AAU41601.1| YqeZ [Bacillus licheniformis ATCC 14580] gi|145903062|gb|AAU24239.2| intermembrane protease YqeZ [Bacillus licheniformis ATCC 14580] Length = 439 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSH--VEDNSPHVARIAIRGQIEDS-QELIERIERISRDD 64 +K + ++L V++ H V+ + V I I +E + +ER + + D Sbjct: 3 LKKFRIFVALACGFVLFLLLGVHLTVKADGDTVYVIPIEETVEKGLSKFLERSFQEAEDM 62 Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 A +I+ +++PGG+ A + I + PV V+ A SAG ++ ++ I A Sbjct: 63 YAKHIILDINTPGGAVDAVLDMADTIHN--SDIPVTAYVNRRALSAGAYLALNADDIYMA 120 Query: 125 ETSLVG 130 +G Sbjct: 121 PGGKMG 126 >gi|125973612|ref|YP_001037522.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium thermocellum ATCC 27405] gi|256003432|ref|ZP_05428423.1| peptidase S14 ClpP [Clostridium thermocellum DSM 2360] gi|281417817|ref|ZP_06248837.1| peptidase S14 ClpP [Clostridium thermocellum JW20] gi|125713837|gb|ABN52329.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium thermocellum ATCC 27405] gi|255992722|gb|EEU02813.1| peptidase S14 ClpP [Clostridium thermocellum DSM 2360] gi|281409219|gb|EFB39477.1| peptidase S14 ClpP [Clostridium thermocellum JW20] gi|316940146|gb|ADU74180.1| peptidase S14 ClpP [Clostridium thermocellum DSM 1313] Length = 257 Score = 69.0 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 95/243 (39%), Gaps = 55/243 (22%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + + + ++ + + GQIE + +I ++ I + L++ L+ Sbjct: 34 GKTSISSSKGNIHCLTVIGQIEGHMVLPPQNKTTKYEHVIPQLVAIEESEEIDGLLLILN 93 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI I + KP ++ V S G ++ A+N A ++ Sbjct: 94 TVGGDVEAGLAIAEMIASMS--KPTVSLVLGGGHSIGVPMAVATNYSFIAPSA------T 145 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P ++ +GV P+ + + D V+ V+ Sbjct: 146 MTIHP-IRLNGMVIGV---------------------PQTYEYFDRMQDRV----VQFVT 179 Query: 195 ESRNIPYD-------KTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 ++ NI + KT L++ G I G EA K GLID +GG +E + LY L + Sbjct: 180 KNSNISKERFRELMLKTGELANDVGTILFGEEAVKYGLIDEMGGLKEALKKLYELIAKRK 239 Query: 246 IRK 248 K Sbjct: 240 KNK 242 >gi|291542999|emb|CBL16109.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus bromii L2-63] Length = 269 Score = 69.0 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 45/217 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I + + D+ L+V +++ GG AG AI I +K KP ++ V S Sbjct: 84 EHVIPLLVSVEEDERIDGLLVLINTVGGDVEAGLAIAEVISGMK--KPTVSIVLGGGHSI 141 Query: 111 GYLISCASNI-IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G ++ A+ +A S+ +P V + Sbjct: 142 GIPLAVAAKKSFIAKSASMT-------VHP----------VRTTGLTLGV---------- 174 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGR-------IWTGAEAKK 220 P+ + Q + D V+E+ NI D+ L + G I G EA + Sbjct: 175 --PQTFEYFQRMQDRI----TTFVAENSNITKDRYNQLVLNTGELVMDIGTILEGEEAVE 228 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 GLID VG + +LY L + K K Sbjct: 229 EGLIDEVGTVSDAIDALYDLIKESKESKPKSAKSRSK 265 >gi|163119655|ref|YP_080707.2| ATP-dependent protease proteolytic subunit [Bacillus licheniformis ATCC 14580] gi|145903165|gb|AAU25069.2| ATP-dependent protease proteolytic subunit (class III heat-shock protein) [Bacillus licheniformis ATCC 14580] Length = 230 Score = 69.0 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 77/207 (37%), Gaps = 36/207 (17%) Query: 35 SPHVARIAIRGQIEDSQELIERIERISRDD-----SATALIVSLSSPGGSAYAGEAIFRA 89 + A I + G I E + + + +++ + ++SPGG + G+AI Sbjct: 5 NDSTAEITLYGSITGEGWFSESSSKAFQAELKSLGDVSSIDLYINSPGGDVFEGQAIHSM 64 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 +Q+ K + + V +A S +I+ A + I ++ + + P++ +G Sbjct: 65 LQRHKAK--INVYVDALAGSIASVIAMAGDKITMPSNAM------MMIH---NPYMGMVG 113 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + K++ + + + + S+Y + L D Sbjct: 114 NAAEFRKAAD--------------DLDKITESIVSTYLA-----KAGDKLDDGTLRQLLD 154 Query: 210 GRIW-TGAEAKKVGLIDVVGGQEEVWQ 235 W T EA GLID V ++V Sbjct: 155 EETWLTADEALNYGLIDEVSESKDVAA 181 >gi|308174327|ref|YP_003921032.1| membrane bound hydrolase [Bacillus amyloliquefaciens DSM 7] gi|307607191|emb|CBI43562.1| putative membrane bound hydrolase [Bacillus amyloliquefaciens DSM 7] Length = 438 Score = 69.0 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 + + KT + + + + + P V I + +E Q L + R +D Sbjct: 1 MFRKKTGIAVALFGLFVLSLLGVQLNAKADHPSVYVIPVEKNVE--QGLASFLSRSFKDA 58 Query: 65 SATA---LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + +I+ +++PGG+ + I I + PV V++ A SAG I+ ++ I Sbjct: 59 KESGASHIILDINTPGGAVQSALDIADII--GGSDVPVTAYVNKRALSAGAYIALQADEI 116 Query: 122 VAAETSLVG 130 A +G Sbjct: 117 YMAPGGKMG 125 >gi|14520866|ref|NP_126341.1| nodulation protein nfed [Pyrococcus abyssi GE5] gi|5458083|emb|CAB49572.1| nfeD nodulation protein homolog, probable membrane protein [Pyrococcus abyssi GE5] Length = 440 Score = 69.0 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 8/127 (6%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSLS 74 ++ L V F S + N +VA+I +GQI + + +R I+ +++A A+I+ Sbjct: 4 IILPLLVFAFIASPVLAGNVVYVAQI--KGQITSYTYDQFDRYITIAEENNAEAIIIEFD 61 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAETSLVGS 131 +PGG A A I + IQ +++ PVI V AASAG I+ S++I A + +G+ Sbjct: 62 TPGGRADAMMNIIQRIQ--QSKVPVIIYVYPPGATAASAGTYIALGSHLIAMAPGTSIGA 119 Query: 132 IGVLFQY 138 + Y Sbjct: 120 CRPILGY 126 >gi|291278650|ref|YP_003495485.1| hypothetical protein DEFDS_0218 [Deferribacter desulfuricans SSM1] gi|290753352|dbj|BAI79729.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 271 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 35/190 (18%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++DS+E++ I+ +D + L +PGG A I RA++ K++ V V Sbjct: 67 VDDSEEVLRAIQMTDKDVPID---LILHTPGGLVLASLQIARALK--KHKGKVTVFVPHC 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGV----SIKSVKSSP 159 A S G LIS A++ IV +E +++G + L +YP L++ V + + Sbjct: 122 AMSGGTLISLAADEIVMSENAVLGPVDPQLGEYPAASILKLLEQKDVNKIDDKTLIMADV 181 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG---- 215 K S + + +VD + +LS G WT Sbjct: 182 AKKAVSQL------ESAVYELLVDKYEEE----------KAKELAHLLSTG-TWTHDYPI 224 Query: 216 --AEAKKVGL 223 EAKK+GL Sbjct: 225 TFEEAKKLGL 234 >gi|118442934|ref|YP_878200.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi NT] gi|118133390|gb|ABK60434.1| ATP-dependent clp protease proteolytic subunit [Clostridium novyi NT] Length = 233 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 81/226 (35%), Gaps = 49/226 (21%) Query: 40 RIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I GQIE + LI ++ I +DS +++ L++ GG AG AI Sbjct: 37 VLPIIGQIEGHSALPPQSKATKYEHLIPQLVDIETNDSIEGVLIILNTVGGDVEAGLAIA 96 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 I + KP ++ V S G ++ +++ + ++ + +P Sbjct: 97 EMINSLS--KPSVSLVIGGGHSIGVPLATSADYSFISPSA------TMIIHP-------- 140 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES-----RNIPYD 202 + + + P+ + + + F+ S+ R + Sbjct: 141 --IRMNGLVLGV------------PQTFEYFNKMQERIID-FITRTSKMKNETFRKLMLQ 185 Query: 203 KTLVLSD-GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 +L+D G I G +A GLID VGG L + + R Sbjct: 186 TDDLLNDMGTILIGKQAVDYGLIDEVGGLSSAINKLEDIIDNGDKR 231 >gi|167040210|ref|YP_001663195.1| hypothetical protein Teth514_1572 [Thermoanaerobacter sp. X514] gi|300914294|ref|ZP_07131610.1| protein of unknown function DUF107 [Thermoanaerobacter sp. X561] gi|307724470|ref|YP_003904221.1| hypothetical protein Thet_1330 [Thermoanaerobacter sp. X513] gi|166854450|gb|ABY92859.1| protein of unknown function DUF107 [Thermoanaerobacter sp. X514] gi|300889229|gb|EFK84375.1| protein of unknown function DUF107 [Thermoanaerobacter sp. X561] gi|307581531|gb|ADN54930.1| protein of unknown function DUF107 [Thermoanaerobacter sp. X513] Length = 436 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 105/300 (35%), Gaps = 58/300 (19%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISR 62 + ++ T + L L F+ S + V + IRG ++ + ++R ++ Sbjct: 1 MRSRVGTFVIFLITALLFFSLFTNVSGLPKEKGEVLFVPIRGTVDPGMAKFVKRAVEEAK 60 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + A L+ +++PGG A I + I + + P V+ A SAG LI+ + + Sbjct: 61 ETEAALLVFEINTPGGLVDAAVEISQTI--LNSPVPTAAYVNSQATSAGVLIAISCENLY 118 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A S +G + ++V K + + + Sbjct: 119 MAPGSTIG--------------------AAETV-------------PKEEKTISYWRSKL 145 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRI-------------WTGAEAKKVGLIDVVGG 229 + + +E R ++D + T +A ++ L D + Sbjct: 146 EGA--------AERRGRDPRIVAAMADADVEIEGLKERGKILSLTDKKALELKLADGIAA 197 Query: 230 QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + ++ +G D+ ++++K + + F ++ L I ++ + G A Sbjct: 198 DRKELLTVLGVG-DRDVKEVKPFFSERIASFVTSPFVAPMFLTIGFIGIITEVLTPGFGA 256 >gi|296159099|ref|ZP_06841926.1| peptidase S14 ClpP [Burkholderia sp. Ch1-1] gi|295890660|gb|EFG70451.1| peptidase S14 ClpP [Burkholderia sp. Ch1-1] Length = 226 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 39/178 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 Q++I+ ++ A+ + ++SPGG A+ G A+ AIQ+ N V + +AASA Sbjct: 42 QDVIKELKDAKG-----AVNLRINSPGGDAFDGRALATAIQQHGN---VTAHIDGLAASA 93 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 ++ A+ + AE G +V Sbjct: 94 ATYVALAAKSVNIAE-------GAFMMVHNA-----------WTVAVGNAAELGD----- 130 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +Q + + + Y + D+ D W T EAK GL+D + Sbjct: 131 TIAMLQKIDTSIANDY-------AAKTGKTLDEVKAWMDAETWFTAQEAKDAGLVDNI 181 >gi|253682717|ref|ZP_04863514.1| putative Clp protease [Clostridium botulinum D str. 1873] gi|253562429|gb|EES91881.1| putative Clp protease [Clostridium botulinum D str. 1873] Length = 231 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 77/229 (33%), Gaps = 55/229 (24%) Query: 40 RIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I GQIE + +I ++ I +D+ +++ L++ GG AG AI Sbjct: 35 VLPIIGQIEGHSVLPPQSKATKYEHVIPQLVDIEMNDAIEGVLIILNTVGGDVEAGLAIA 94 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGSI-------GVLFQY 138 I + KP ++ V S G ++ +N + ++ +V I GV + Sbjct: 95 EMISSLS--KPSVSLVIGGGHSIGVPLATCANYSFISPSATMIVHPIRMNGLVLGVPQTF 152 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 Y +++ + S K + +++ Sbjct: 153 EYFNKMQERI-IDFIKRTSKINKDTLRSLMLQTDE-------LLNDM------------- 191 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 G I G +A GLID VGG L + +S + Sbjct: 192 -----------GTILIGKQAVDYGLIDEVGGLSSAINKLEEIIDSKSKK 229 >gi|154494952|ref|ZP_02033957.1| hypothetical protein PARMER_03998 [Parabacteroides merdae ATCC 43184] gi|154085502|gb|EDN84547.1| hypothetical protein PARMER_03998 [Parabacteroides merdae ATCC 43184] Length = 460 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 106/273 (38%), Gaps = 39/273 (14%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALI 70 + L+++ + + F S + P + +I I+ +I ++ L + A A++ Sbjct: 7 LFLAIILVQIAPFI--SAADTLYPLIYKIDIKKEISNTTRLYLSNGLAEAYA-LGADAVL 63 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +++ GG A +++ AI + N PV + AASAG LIS A I + + +G Sbjct: 64 IHMNTYGGQVDAADSMRTAI--LYNPIPVYVFIDNNAASAGALISIACKKIYMRKGANIG 121 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV----DSSY 186 P K + S + A QD + D+ Y Sbjct: 122 ----AATVVNPTGEAM------------PDKYQSYMRSMMRSTAEAHGQDTIVQKNDTLY 165 Query: 187 HWFVR-LVSESR-NIPYDKTLVLSDGRI--WTGAEAKKVGLIDVVG-GQEEVWQSLYALG 241 W L++E+ + ++ G++ +T EA+K G D + +EV Sbjct: 166 KWKRDPLIAEAMVDERVAIPNLIDTGKVLTFTAQEAQKWGYCDGIAENPDEVITQYLG-- 223 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSISSLLED 274 K+K + P W DLK ++ + + Sbjct: 224 --YKDYKMKSYIP---SWQDDLKGFLMNPIFQS 251 >gi|14520474|ref|NP_125949.1| hypothetical protein PAB2437 [Pyrococcus abyssi GE5] gi|5457689|emb|CAB49180.1| Hypothetical protein, DUF114 family [Pyrococcus abyssi GE5] Length = 280 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 23/185 (12%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +EDS+E++ I +D + + +PGG A I +A++ VI Sbjct: 72 SMEDSEEVLRAIRMAPKDKPID---LIIHTPGGLVLAATQIAKALKDHPAETRVIV--PH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ +++G + L QYP + + P K + Sbjct: 127 YAMSGGTLIALAADKIIMDPHAVLGPVDPQLGQYPAPS-------IIRAVERKGPDKVD- 178 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AEA 218 + A + ++ V D Y + +L++GR WT EA Sbjct: 179 DQTLILADVAEKAIKQVRDFIYDLLKD--KYGDEKAKELAKILTEGR-WTHDYPITVEEA 235 Query: 219 KKVGL 223 +K+GL Sbjct: 236 RKLGL 240 >gi|332295626|ref|YP_004437549.1| protein of unknown function DUF114 [Thermodesulfobium narugense DSM 14796] gi|332178729|gb|AEE14418.1| protein of unknown function DUF114 [Thermodesulfobium narugense DSM 14796] Length = 276 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I +D +I+ +PGG A E I +A+ +++ PV + Sbjct: 67 IDDSEQILRAIRLTEKDMPID-IILH--TPGGLVLAAEQIAKAL--IRHPAPVRVFIPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G +++ A++ I E +++G Sbjct: 122 AMSGGTMLALAADEIYLDENAVLG 145 >gi|330684877|gb|EGG96562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU121] Length = 196 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 41/199 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A + V + + ++ ++ Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRYALPNAEV------MIHQPLGGAQGQATEIEIAA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + K FSE ++++ +Q D F+ Sbjct: 141 NHILKTREK-LNRIFSERTGQSIEKIQQDTDR--DNFL---------------------- 175 Query: 213 WTGAEAKKVGLIDVVGGQE 231 T EAK GL+D V E Sbjct: 176 -TAEEAKAYGLVDEVMEPE 193 >gi|319790302|ref|YP_004151935.1| periplasmic serine protease [Thermovibrio ammonificans HB-1] gi|317114804|gb|ADU97294.1| periplasmic serine protease [Thermovibrio ammonificans HB-1] Length = 290 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+ ++ I D + + +PGG A A I A+ VK++ PV V Sbjct: 71 TIEDSERVLRAIRMTPDDMPIDFI---IHTPGGLALAATQIASAL--VKHKAPVRVIVPH 125 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV +++G + + Q+P Sbjct: 126 YAMSGGTLIALAADEIVMDPNAVLGPLDPQIGQFP 160 >gi|297564880|ref|YP_003683852.1| hypothetical protein Mesil_0404 [Meiothermus silvanus DSM 9946] gi|296849329|gb|ADH62344.1| protein of unknown function DUF114 [Meiothermus silvanus DSM 9946] Length = 280 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D S + + L +PGG A E I A+ +K+ V V Sbjct: 68 IDDSEQVLRAIR--LTDKSVP-IDLVLHTPGGLVLAAEQIAEAL--IKHPAKVTVFVPHY 122 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV E +++G Sbjct: 123 AMSGGTLIALAADEIVMDENAVLG 146 >gi|269793010|ref|YP_003317914.1| hypothetical protein Taci_1401 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100645|gb|ACZ19632.1| protein of unknown function DUF114 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 277 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 44/195 (22%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I + + +PGG A E I A++K ++ V V Sbjct: 65 IEDSEEVLRFIRMTPDHVPIDMV---IHTPGGLLLAAEQIAEALRKHPSK--VTVFVPHY 119 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV +++G + L Q+P +K+ K Sbjct: 120 AMSGGTLIALAADEIVMDRHAVLGPVDPQLGQWPAAS-----------IIKAVEQK---- 164 Query: 166 PFSEVNPK-------AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIWT 214 P EV+ A + M+ FVR + +S + ++ L+ DGR WT Sbjct: 165 PVEEVDDHTLIMADVARKAMRQT-----EDFVRRLLKSNGMEEERADALAKALTDGR-WT 218 Query: 215 G------AEAKKVGL 223 EA+ +GL Sbjct: 219 HDYPINIDEARSLGL 233 >gi|260889396|ref|ZP_05900659.1| putative prophage L54a, Clp protease [Leptotrichia hofstadii F0254] gi|260860807|gb|EEX75307.1| putative prophage L54a, Clp protease [Leptotrichia hofstadii F0254] Length = 260 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 88/243 (36%), Gaps = 42/243 (17%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD-----SATALIVSLSSPGGS 79 + + V++ A + + G I + + +++ + D + + ++SPGGS Sbjct: 5 LKFWNLVKNEEEKTAELILYGSIGSDEYWDDVSDKVFKQDIENLGDVENITLYINSPGGS 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 ++ AI ++ K + V + +AASA +I+ A + + + +L + Sbjct: 65 VFSAVAIANTLKNHKAK--VTANIDGLAASAATIITSACDTVRMPKNAL------FMIHN 116 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + F+ N + +Q ++++ + + Sbjct: 117 PIT------------------------FAYGNNQEMQKTVEMLNKVKNSIIETYLNKAKT 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV----GGQEEVWQSLYALGVDQSIRKIKDWNP 254 + L D W AK+ G +D + G+E V L + I K K++ Sbjct: 153 DKETLSELMDNETWMDAETAKEYGFVDEIVNEEVGKEFVENKLIINNMAFDISKFKNFRK 212 Query: 255 PKN 257 K+ Sbjct: 213 VKD 215 >gi|134046687|ref|YP_001098172.1| hypothetical protein MmarC5_1661 [Methanococcus maripaludis C5] gi|132664312|gb|ABO35958.1| protein of unknown function DUF114 [Methanococcus maripaludis C5] Length = 274 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + L +PGG A E I A+++ K + VI + Sbjct: 66 TIEDSEEILRAIRMTPEDMPID---LILHTPGGLVLASEQIATALKEHKAKTTVI--IPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ I+ + +++G + + QYP Sbjct: 121 YAMSGGSLIALAADEIIIDKNAVMGPVDPQVGQYP 155 >gi|45357586|ref|NP_987143.1| hypothetical protein MMP0023 [Methanococcus maripaludis S2] gi|45047146|emb|CAF29579.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 274 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + L +PGG A E I A+++ K + VI + Sbjct: 66 TIEDSEEILRAIRMTPEDMPID---LILHTPGGLVLASEQIAIALKEHKAKTTVI--IPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ I+ + +++G + + QYP Sbjct: 121 YAMSGGSLIALAADEIIIDKNAVMGPVDPQIGQYP 155 >gi|167948599|ref|ZP_02535673.1| hypothetical protein Epers_19523 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 59 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 26/44 (59%) Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +M AS GY I+ A++ I A E S+VGSIGVL + +L Sbjct: 4 DMCASGGYYIAAAADEIYADEGSIVGSIGVLMNGFGFVDVMQEL 47 >gi|114566793|ref|YP_753947.1| peptidase S14, ClpP [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337728|gb|ABI68576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 267 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 75/204 (36%), Gaps = 43/204 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + + L+V+L++ GG AG A+ I + KP ++ V S Sbjct: 94 EHIIPQLVAVEENPQIKGLLVALNTVGGDVEAGLALAEMIASLS--KPTVSIVLGGGHSI 151 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +N A ++ + +P + + + Sbjct: 152 GSTIAVCTNYSFIAPSA------TMTIHP----------IRLTGLVIGV---------PQ 186 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-------SD--GRIWTGAEAKKV 221 + + MQD V VR V E NI +K L + G + G +A Sbjct: 187 TYEYLDKMQDRV-------VRFVVEHSNISEEKFRELMFRMGDLARDIGTVLVGKDAVDC 239 Query: 222 GLIDVVGGQEEVWQSLYALGVDQS 245 GLID VGG ++ ++ L Sbjct: 240 GLIDQVGGIKDALNKIHELKNASG 263 >gi|150402944|ref|YP_001330238.1| hypothetical protein MmarC7_1020 [Methanococcus maripaludis C7] gi|150033974|gb|ABR66087.1| protein of unknown function DUF114 [Methanococcus maripaludis C7] Length = 274 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + L +PGG A E I A+++ K + VI + Sbjct: 66 TIEDSEEILRAIRMTPEDMPID---LILHTPGGLVLASEQIATALKEHKAKTTVI--IPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ I+ + +++G + + QYP Sbjct: 121 YAMSGGSLIALAADEIIIDKNAVMGPVDPQVGQYP 155 >gi|83589919|ref|YP_429928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella thermoacetica ATCC 39073] gi|83572833|gb|ABC19385.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella thermoacetica ATCC 39073] Length = 259 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 89/235 (37%), Gaps = 55/235 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 +++ D + + I GQIE + +I ++ + +D S L+V L+ Sbjct: 47 GQANIPDFKSEIHCLQIVGQIEGHLVMPPQNKTTKYEHIIPQLVAVEQDPSIKGLLVVLN 106 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI + + KPV++ V S G IS A+N AET+ Sbjct: 107 TVGGDVEAGLAIAEMLVSMS--KPVVSLVLGGGHSIGVPISVAANYSFIAETA------T 158 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P + + + + + MQD V +R + Sbjct: 159 MTIHP----------IRLTGLVIGV---------PQTYEYLDKMQDRV-------IRFIV 192 Query: 195 ESRNIPYDKTL-------VLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 E NI + L+ G I G +A +VGLID VGG + + L Sbjct: 193 EHANISEQELRRLMFQTGELARDIGTILVGQDAVRVGLIDEVGGLASAVRKVKEL 247 >gi|15643678|ref|NP_228724.1| hypothetical protein TM0916 [Thermotoga maritima MSB8] gi|4981452|gb|AAD35997.1|AE001755_20 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 284 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 30/169 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + L +PGG A E I RA++ K + V V Sbjct: 72 IEDSEEILRAIKLTPSDMPID---LILHTPGGLVLAAEQIARALKMHKGK--VTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ A++ I+ E +++G IG P + + K V+ Sbjct: 127 AMSGGTLIALAADEIIMDENAVLGPLDPQIG-NMPAPSILAAVKKKDVNEV--------- 176 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD 209 ++ D+ + + V E S + +K ++D Sbjct: 177 ---------DDQTLILADIAEKAIRQVKEFVVEILSDKVSKEKAEKIAD 216 >gi|296108928|ref|YP_003615877.1| protein of unknown function DUF114 [Methanocaldococcus infernus ME] gi|295433742|gb|ADG12913.1| protein of unknown function DUF114 [Methanocaldococcus infernus ME] Length = 272 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 25/188 (13%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I + + + +PGG A A E I A+++ K VI + Sbjct: 66 TIEDSEEILRAIRLTPDNMPID---LIIHTPGGIALAAEQIALALKEHKAETRVI--IPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ I+ + +++G + L QYP + K Sbjct: 121 YAMSGGTLIALAADKIIMDKNAVLGPVDPQLGQYPAAS-------IIETYYKKGE--KVS 171 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AEA 218 F + A + ++ + D Y E + K L++GR WT ++ Sbjct: 172 DEFLVLYDVAKKAIKQMEDFVYELLKDKYGEEKAKELAKI--LTEGR-WTHDYPLTVSKL 228 Query: 219 KKVGL-ID 225 K++GL ID Sbjct: 229 KELGLEID 236 >gi|124027194|ref|YP_001012514.1| hypothetical protein Hbut_0297 [Hyperthermus butylicus DSM 5456] gi|123977888|gb|ABM80169.1| hypothetical protein Hbut_0297 [Hyperthermus butylicus DSM 5456] Length = 241 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 42/196 (21%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ + + I + + L +PGG A I A+++ +K I V Sbjct: 23 IEDSEAV---LRAIRTTPPNKPIALILHTPGGLVLAASQIAMALKRHPGKK--IVIVPHY 77 Query: 107 AASAGYLISCASNIIVAAETSLVGSI---------GVLFQYPYVKPFLDKLGVSIKSVKS 157 A S G LI+ A++ I+ +++G + G + P + G Sbjct: 78 AMSGGTLIALAADEILMDPNAVLGPLDPQLALGPQGPVVPAPSIVKVAKMKGDKA----- 132 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIW 213 ++V KA++ MQ+++ Y + +K L+ +G W Sbjct: 133 ---SDTTLVVADVAEKAIREMQELI--VYLL-------RDKMGEEKAWELAKKLTEGG-W 179 Query: 214 TG------AEAKKVGL 223 T +A+++GL Sbjct: 180 THDYPITVEKARELGL 195 >gi|237806459|ref|ZP_04593163.1| putative inner membrane peptidase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027572|gb|EGI07627.1| putative inner membrane peptidase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 61 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%) Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K + F E K + Q +D ++ F V+ R P ++ G +W G Sbjct: 1 TAGEYKRTLTVFGENTEKGREKFQQDLDITHDLFKNFVASYR--PQLSIDEVATGEVWLG 58 Query: 216 AEA 218 A Sbjct: 59 MAA 61 >gi|325279621|ref|YP_004252163.1| peptidase S49 [Odoribacter splanchnicus DSM 20712] gi|324311430|gb|ADY31983.1| peptidase S49 [Odoribacter splanchnicus DSM 20712] Length = 467 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 23/232 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALI 70 + L L+ L + + + E V ++ I+ +I + L + ++ + A ++ Sbjct: 7 FRKLVLLVLGICWLNTLGAAEPEKV-VYKVDIKDEIGPEVWRLARKSFDLAGQEKADYIL 65 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +++ GG +++ I + +RKPV + AASAG LIS A + I E + +G Sbjct: 66 IHMNTYGGMVVYADSLRSMI--LNSRKPVWVFIDNNAASAGALISIACDKIYMREGANIG 123 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA-VQMMQDVVDSSYHWF 189 V + + +S S + D+ Y W Sbjct: 124 ------AATVVNQTGEAMPDKYQSY-------MRSMIRSTAEAQGRDTLVQGRDTVYRWK 170 Query: 190 VR-LVSESRNIPYDKTLVLSD-GRI--WTGAEAKKVGLIDVVG-GQEEVWQS 236 ++E+ ++D GR+ +T EA K G D + EEV + Sbjct: 171 RNPHIAEAMVDQSIYIQGITDSGRVVTFTAREAMKYGFCDGMAESVEEVLKK 222 >gi|304316850|ref|YP_003851995.1| peptidase S14 ClpP [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778352|gb|ADL68911.1| peptidase S14 ClpP [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 233 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 47/209 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I + L++ L++ GG AG AI I + KP ++ V S Sbjct: 61 EHIIPQLVAIEENPQIKGLLILLNTVGGDVEAGLAIAEMISSLS--KPTVSIVLGGGHSI 118 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ +SN ++ + G IGV + Y D++ V +++S +K Sbjct: 119 GVPLAVSSNYSFIVPSATMTIHPIRMTGLVIGVPQTFDYFNKMQDRI-VEF-VIRNSRIK 176 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAK 219 + M ++ K L++ G I G EA Sbjct: 177 RD------------AFMNLML--------------------KIGELANDVGTILVGKEAV 204 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 GLID VGG E L L ++ ++ Sbjct: 205 DYGLIDEVGGVSEAINKLQQLIKEKENKR 233 >gi|28211745|ref|NP_782689.1| phage protein [Clostridium tetani E88] gi|28204187|gb|AAO36626.1| phage protein [Clostridium tetani E88] Length = 226 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 46/208 (22%) Query: 40 RIAIRGQIEDSQEL-------------IERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +I ++G I DS + + +S + L V ++S GGS +AG I Sbjct: 2 KINVKGPIIDSDDQWIYDWFGIDATSPKKVQNELSNSKNNEGLEVEINSGGGSVFAGSEI 61 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++ K V ++ +AASA +I+ A + ++ + T G + + Sbjct: 62 YTLLKDYKGN--VTVKIVGLAASAASVIAMAGDKVLISPT------GQIMIH-NASGCF- 111 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 S + E + ++ + + ++Y + ++ L Sbjct: 112 ----------SGDYRNM-----EKGSEILKNVNITISNAYKL-------KTGLSSEELLD 149 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEV 233 + + W T A +D + + V Sbjct: 150 MMNKETWLTPQNALDNKFVDEIMFTDGV 177 >gi|313679166|ref|YP_004056905.1| hypothetical protein Ocepr_0270 [Oceanithermus profundus DSM 14977] gi|313151881|gb|ADR35732.1| hypothetical protein Ocepr_0270 [Oceanithermus profundus DSM 14977] Length = 281 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I D + + L +PGG A E I A+++ + V V Sbjct: 71 IDDSEQVLRAIR--MTDKHVP-IDLILHTPGGLVLAAEQIAEALKRHPAK--VTVFVPHY 125 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ ++ IV E +++G Sbjct: 126 AMSGGTLIALGADEIVMDENAVLG 149 >gi|20806897|ref|NP_622068.1| membrane-bound serine protease (ClpP class) [Thermoanaerobacter tengcongensis MB4] gi|20515371|gb|AAM23672.1| Membrane-bound serine protease (ClpP class) [Thermoanaerobacter tengcongensis MB4] Length = 441 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 113/301 (37%), Gaps = 47/301 (15%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERIS 61 F ++KI ++ +++ + ++ S V + + G I + IE + + Sbjct: 2 FTMRKI----LLTTILLVFIILPPSSLQATSTQNPVYVLTVDGPIVPVVADYIESGFKAA 57 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA---SAGYLISCAS 118 D A+ +++ LS+PGG + I I + + PV+ V A SAG I+ ++ Sbjct: 58 ERDGASCIVIELSTPGGLYTTTQKIVTQI--LNSPIPVVVYVSPAGAWAGSAGTFITLSA 115 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 NI A S +G +P VSI+ S ++ Q Sbjct: 116 NIAAMAPGSRIG-----AAHP----------VSIE------------DDSAMSEIQRQK- 147 Query: 179 QDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLID-VVGGQEEVWQS 236 + ++R ++E+R + + R +T EA LID ++ + Sbjct: 148 ---ITHDAAAWIRSIAENRGRDPKNAEMAVVESRSFTDTEALNANLIDLRANNLNDLLKK 204 Query: 237 LYALGV---DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQG-LWAVWN 292 + V D + +K P + Y ++ + + L+ + G + +++ Sbjct: 205 INGKTVKNFDGTTITLKTDGPIRYYPMTSVQKFLFAISDPNIAYLLMSAGILGIILELYH 264 Query: 293 P 293 P Sbjct: 265 P 265 >gi|331269619|ref|YP_004396111.1| peptidase S14, ClpP [Clostridium botulinum BKT015925] gi|329126169|gb|AEB76114.1| peptidase S14, ClpP [Clostridium botulinum BKT015925] Length = 231 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 55/229 (24%) Query: 40 RIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I GQIE + +I ++ I +D +++ L++ GG AG AI Sbjct: 35 VLPIIGQIEGHSVLPPQSKATKYEHVIPQLVDIEMNDDIEGVLIILNTVGGDVEAGLAIA 94 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGSI-------GVLFQY 138 I + KP ++ V S G ++ ++ + ++ +V I GV + Sbjct: 95 EMISSLS--KPSVSLVIGGGHSIGVPLATCADYSFISPSATMIVHPIRMNGLVLGVPQTF 152 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 Y +++ + S K + +++ Sbjct: 153 EYFNKMQERI-IDFIKRTSKINKDTLRSLMLQTDE-------LLNDM------------- 191 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 G I G +A GLID VGG L + +S + Sbjct: 192 -----------GTILIGKQAVDYGLIDEVGGLSSAINKLEEIIDSKSKK 229 >gi|291563562|emb|CBL42378.1| Protease subunit of ATP-dependent Clp proteases [butyrate-producing bacterium SS3/4] Length = 224 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 55/231 (23%) Query: 31 VEDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGG 78 +E+N + ++I G+IE ++ + ++ D+ +++ +++ GG Sbjct: 24 LEENGKRIHLLSIIGEIEGHDNLSGSTKTTKYEHILPELAKVESDEKIGGVLILVNTIGG 83 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 G A+ I + KP ++ V + S G ++ AS+ T G + + Sbjct: 84 DVSCGLALAEMIASLS--KPTVSLVIGDSHSIGVPLAVASDYSFIVPT------GTMLVH 135 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 P V + + + + +M+++ + + VSE Sbjct: 136 P----------VRMSGMVIG---------TAQTYEYFEMIEERI-------ISFVSEHSR 169 Query: 199 IPYDKTLVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 I +K L G + G EA + GLID GG + + L AL Sbjct: 170 IDREKMKRLMHNTKMLTKDLGTVLVGKEAVECGLIDGEGGIRDAIEKLNAL 220 >gi|288930477|ref|YP_003434537.1| hypothetical protein Ferp_0072 [Ferroglobus placidus DSM 10642] gi|288892725|gb|ADC64262.1| protein of unknown function DUF114 [Ferroglobus placidus DSM 10642] Length = 277 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 21/171 (12%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I RD + L +PGG A I +AI+ + VI Sbjct: 71 IEDSEQVLRAIRMTPRDTPID---LILHTPGGLVLAATQIAKAIKDHPAKTTVIV--PHY 125 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQY--PYVKPFLDKLGVSIKSVKSSPMKAE 163 A S G LI+ A++ I+ +++G + + Y P + +++ V+ + + Sbjct: 126 AMSGGTLIAIAADEIIMDPHAVLGPLDPQIMGYPAPSILKAVERKDVN-------EVDDQ 178 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 ++V KA++ +++ + R + L++GR WT Sbjct: 179 TLILADVAEKAIKQLREFIVELLED-----RMGREKAEEIAKTLTEGR-WT 223 >gi|254520131|ref|ZP_05132187.1| endopeptidase Clp [Clostridium sp. 7_2_43FAA] gi|226913880|gb|EEH99081.1| endopeptidase Clp [Clostridium sp. 7_2_43FAA] Length = 198 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D+ ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLSGEINDTTSNLVVSQLLFLESEDPDKDIHLYINSPGGSITAGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L+S + S + + + + Sbjct: 88 -VSTICIGMAASMGSFLLSSGAKGKRFVLPNSE------IMIHQPLGGFQGQATDFDIHA 140 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + +K + SE + ++ ++ V+ Y Sbjct: 141 RRII--KIKESLNRILSENTNQPLEKIKTDVERDY------------------------- 173 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 T EA GL+D V + + Sbjct: 174 FMTAEEAMNYGLVDKVITKND 194 >gi|74311435|ref|YP_309854.1| putative protease/scaffold protein [Shigella sonnei Ss046] gi|73854912|gb|AAZ87619.1| putative protease/scaffold protein [Shigella sonnei Ss046] Length = 381 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 81/236 (34%), Gaps = 49/236 (20%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + I+ + + + + SPGG + G AI+ A++ +K I + MAAS I+ Sbjct: 34 DEINACGNVPEIHLRIHSPGGDIFEGLAIYNALKNHPAKK--IVHIEGMAASMASFIAMC 91 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + IV E ++ + + + V + V+ Sbjct: 92 GDHIVMPENAM------MMIHA------------PRGVTAGVSGD------------VRR 121 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQS 236 D++D + + + + W G E K G D EV + Sbjct: 122 FADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFAD------EVIPA 175 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + A+ +S R N P+N I S++ +Q ++ G+ ++ Sbjct: 176 ITAMARIESKRIGDFSNMPEN----------IKSMISQKTGSGEQERLNGIRELFG 221 >gi|168187899|ref|ZP_02622534.1| Clp protease [Clostridium botulinum C str. Eklund] gi|169294242|gb|EDS76375.1| Clp protease [Clostridium botulinum C str. Eklund] Length = 232 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 55/230 (23%) Query: 40 RIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 + I GQIE + LI ++ I +D+ +++ L++ GG AG AI Sbjct: 37 VLPIIGQIEGHSVLPPQSKATKYEHLIPQLVDIETNDAIEGVLIILNTVGGDVEAGLAIA 96 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGSI-------GVLFQY 138 I + KP ++ V S G ++ +++ + ++ ++ I GV + Sbjct: 97 EMINSLS--KPSVSLVIGGGHSIGVPLATSADYSFISPSATMIIHPIRMNGLVLGVPQTF 154 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 Y +++ + + ++S MK E F + + +++ D+ Sbjct: 155 EYFNKMQERI-IDFIT-RTSKMKNE--TFRSLMLQTDELLNDM----------------- 193 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G I G +A GLID VGG L + ++ + Sbjct: 194 -----------GTILIGKQAVDYGLIDEVGGLSSAINKLEDIIDNRDKKN 232 >gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus pseudintermedius ED99] Length = 195 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 39/200 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D+ + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + +++SE P +K +D R Sbjct: 134 -----------------TEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEEV 233 T EAK+ GLID V E+ Sbjct: 176 TAQEAKEYGLIDEVMEPEKA 195 >gi|46241469|gb|AAS82934.1| capsid protein [Wolbachia phage WO] Length = 136 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|170723514|ref|YP_001751202.1| peptidase S14 ClpP [Pseudomonas putida W619] gi|169761517|gb|ACA74833.1| peptidase S14 ClpP [Pseudomonas putida W619] Length = 620 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 40/201 (19%) Query: 59 RISRDDSATALIV-------SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + A++V ++SPGGS AI+ ++ K+ V V + ASA Sbjct: 10 DAATAQRVKAIVVGQMPITVQINSPGGSVTDALAIYTVLR--KHTGRVTAIVDGLCASAA 67 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 L++ A++ IV AE SL + + + +V S Sbjct: 68 TLVALAADEIVMAEHSL------MMVH------------NPWTVASGD------------ 97 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDVVGGQ 230 ++ D +D + L +E + +K + W + EA G V Sbjct: 98 ADEMRKTADTLDVASREMTALYTERTGLSAEKITAIMGAETWFNSYEAVDAGFAHRVDNS 157 Query: 231 EEVWQSLYALGVDQSIRKIKD 251 E + A + R I+ Sbjct: 158 ERSKPRMAATAMAFIERVIQT 178 >gi|312623544|ref|YP_004025157.1| hypothetical protein Calkro_2538 [Caldicellulosiruptor kronotskyensis 2002] gi|312204011|gb|ADQ47338.1| protein of unknown function DUF114 [Caldicellulosiruptor kronotskyensis 2002] Length = 269 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 8/98 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E+I I D S +I+ +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAIN--MTDPSIPLDIILH--TPGGLVLAATQIARAIKRHKGK--VTVHVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK 142 A S G LI+ A++ IV +E +++G + + ++P V Sbjct: 121 YAMSGGTLIALAADEIVMSEDAILGPVDPQIGEFPAVS 158 >gi|145478867|ref|XP_001425456.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392526|emb|CAK58058.1| unnamed protein product [Paramecium tetraurelia] Length = 227 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 65/170 (38%), Gaps = 6/170 (3%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAET 126 + + ++S GGS + + I+K + P+ ++ + + + Sbjct: 47 IALIINSLGGSLIQTQNLANLIKKYSQTNKIPIYCFGEDIVIKSALGLLTIGDKAYVNPY 106 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 ++VG++G + ++ + K + ++ +P +E++ K + ++ + + Sbjct: 107 AIVGNMGYAQPFFDLRKLASNWHIYQKHIVTNENMKLLNPLTELSEKNKEWVEQQMKNQE 166 Query: 187 HWFVRLVSESRNIP----YDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +R + D+ + I K G+ID G + Sbjct: 167 AELINMIEINRKLDKSTFEDRVKEVYHNGIVQPNVLLKHGIIDGYIGFDT 216 >gi|258511812|ref|YP_003185246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478538|gb|ACV58857.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 198 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 42/196 (21%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G I+D + ++ ++ ++ DD + + ++SPGGS AG AI+ +Q ++ Sbjct: 29 RIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGMAIYDTMQHIRPA 88 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V T MAAS +L++ A + + + V+ + + Sbjct: 89 --VSTLCIGMAASMGAFLLAAGEKGKRYALPNAE------IMIHQPLGGVEGQASDIKIH 140 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K SE + +++++ D + Sbjct: 141 AEWILKTKDK-LNRLLSERTGQPLEVIERDTDRDH------------------------- 174 Query: 212 IWTGAEAKKVGLIDVV 227 T EAK GLID V Sbjct: 175 FMTAEEAKAYGLIDEV 190 >gi|218290814|ref|ZP_03494883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius LAA1] gi|218239172|gb|EED06373.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius LAA1] Length = 198 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 42/196 (21%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G I+D + ++ ++ ++ DD + + ++SPGGS AG AI+ +Q ++ Sbjct: 29 RIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGMAIYDTMQHIRPA 88 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V T MAAS +L++ A + + + V+ + + Sbjct: 89 --VSTLCIGMAASMGAFLLAAGEKGKRYALPNAE------IMIHQPLGGVEGQASDIKIH 140 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K SE + +++++ D + Sbjct: 141 AEWILKTKDK-LNRLLSERTGQPLEVIERDTDRDH------------------------- 174 Query: 212 IWTGAEAKKVGLIDVV 227 T EAK GLID V Sbjct: 175 FMTAEEAKAYGLIDEV 190 >gi|330817608|ref|YP_004361313.1| hypothetical protein bgla_1g27400 [Burkholderia gladioli BSR3] gi|327370001|gb|AEA61357.1| hypothetical protein bgla_1g27400 [Burkholderia gladioli BSR3] Length = 366 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 42/214 (19%) Query: 41 IAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G I D+++ R++ + SA +++V+++S GG + I+ +++ + Sbjct: 24 IRIYGDIGFWGTDAEQFAARLDEVG--PSAASIVVAVNSMGGDVFDAFTIYNLLRRYPGK 81 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V +AASA L+ + IV ++ L + + ++ Sbjct: 82 --TTGRVDGIAASAASLLLMGCSQIVMPSNAM------LMIH------------NPHTLA 121 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + ++ + D++ S+ + +E D L D W T Sbjct: 122 AGD------------EGELRRLADLLGSTSANMLTAYAERSGQTEDTVRELMDAETWLTA 169 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 A+A ++G D EE + G + + Sbjct: 170 AQAVELGFCD---TIEEPIRIAAYAGAQPLVARF 200 >gi|168204793|ref|ZP_02630798.1| phage protein [Clostridium perfringens E str. JGS1987] gi|170663602|gb|EDT16285.1| phage protein [Clostridium perfringens E str. JGS1987] Length = 672 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 84/219 (38%), Gaps = 54/219 (24%) Query: 39 ARIAIRGQIEDSQ----------------ELIERIERISRDDSATALIVSLSSPGGSAYA 82 A I I+G I D ++I +I+ + + L + ++SPGG +A Sbjct: 2 AEIEIKGDIVDDDWGRWYEWLGYSYTSPSKVINQIKAANGEK----LTIKINSPGGDIFA 57 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ +++ K + ++ MAASA +I+ A + T+ L + Sbjct: 58 ASDIYTELREYKGE--IEIKITGMAASAASVIAMAG-KSSMSPTA------QLMVH---- 104 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 ++ + + E + ++ D + ++Y + + Sbjct: 105 --------NVSTGTWGDYRDM-----EHTAEVLKNANDTIANAYMC-------KTGMSRE 144 Query: 203 KTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + L L + + + +AK++G ID + +E +L AL Sbjct: 145 EALELMNNETYLSATKAKELGFIDEIMFEESNKVNLSAL 183 >gi|300764715|ref|ZP_07074706.1| hypothetical protein LMHG_11061 [Listeria monocytogenes FSL N1-017] gi|300514601|gb|EFK41657.1| hypothetical protein LMHG_11061 [Listeria monocytogenes FSL N1-017] Length = 257 Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 66/192 (34%), Gaps = 37/192 (19%) Query: 41 IAIRGQIEDSQELIERIE-RISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + GQI + + I ++ +D+ + + V ++SPGG A I+ +++ Sbjct: 34 LYLNGQIAEVSWFDDDITPQLFKDELMSGDGNITVWINSPGGDCVAAAQIYNMLKEYSGD 93 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A + +V + ++ + + + +V Sbjct: 94 --VTIKIDGLAASAASVIAMAGDKVVMSPVAM------MMIH------------NPSTVA 133 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 Q ++D + + K + D W Sbjct: 134 FGDRVDM------------QKAMAMLDEVKESIINAYEIKTGMSRTKLAHMMDAETWMDA 181 Query: 216 AEAKKVGLIDVV 227 A +G D V Sbjct: 182 RSAVDLGFADDV 193 >gi|217959640|ref|YP_002338192.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus AH187] gi|217067295|gb|ACJ81545.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus AH187] Length = 251 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 43/217 (19%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 14 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IETINLYINSPGGSVF 71 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + + VI+ + + AS ++ S+ I+ S+ + + Sbjct: 72 ETMAIIAMLQRHQAK--VISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 120 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + + ++ Q +V L + Sbjct: 121 ---------NAWTYASGN----ANQLRKAADDIERINQSMVQHY------LTRAGDKLDE 161 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 D L D W + EA GL D + + L Sbjct: 162 DTLKQLLDAETWLSAEEAMNYGLCDEIISENNAAACL 198 >gi|119898161|ref|YP_933374.1| endopeptidase Clp [Azoarcus sp. BH72] gi|119670574|emb|CAL94487.1| Endopeptidase Clp [Azoarcus sp. BH72] Length = 625 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 64/189 (33%), Gaps = 40/189 (21%) Query: 42 AIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV 99 I G+I D ++E++ + ++V ++S GGS AG I+ A++ + V Sbjct: 5 EIIGEITDVTAREILAELALAGDSP----VVVRINSQGGSVQAGVTIYEALKAHRPS--V 58 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 E+ A SA LI+ A + A TSL L + ++ Sbjct: 59 TVEIVGWALSAASLIAMAGRPVRMAPTSL------LMVHAPWT-------------SATG 99 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 +E + V S F R P G W T EA Sbjct: 100 NASELR-------DTAAALDAVARSMRAAFSRT-----KQPPKTIDAWLTGEHWFTAEEA 147 Query: 219 KKVGLIDVV 227 GL D + Sbjct: 148 IAAGLADEL 156 >gi|316936719|gb|ADU60354.1| capsid protein [Wolbachia phage WO] Length = 132 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 VGGQEEVWQSLYALG 241 V E + ++G Sbjct: 62 VTTFFEFINNHRSVG 76 >gi|182417589|ref|ZP_02948911.1| Clp protease [Clostridium butyricum 5521] gi|237667767|ref|ZP_04527751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378544|gb|EDT76073.1| Clp protease [Clostridium butyricum 5521] gi|237656115|gb|EEP53671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium butyricum E4 str. BoNT E BL5262] Length = 201 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ ++ ++ + +D + + ++SPGGS AG AI+ +Q + Sbjct: 29 IIMLSGEVNDASAQLIVAQLLFLDSEDPDKDISLYINSPGGSVTAGMAIYDTMQLINAD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L+SC + A + + + + F + V+ + Sbjct: 88 -VSTICVGMAASMGAFLLSCGAKGKRYALPNAE------IMIHQPLGGFQGQ--VTDIEI 138 Query: 156 KSSPM---KAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 ++ M K + SE K ++++Q + Sbjct: 139 HANRMLKVKEVLNKTLSENTGKPLEVIQRDTERDN------------------------- 173 Query: 212 IWTGAEAKKVGLIDVV 227 + +AK+ GL+D + Sbjct: 174 FMSAEDAKEYGLVDEI 189 >gi|164688506|ref|ZP_02212534.1| hypothetical protein CLOBAR_02151 [Clostridium bartlettii DSM 16795] gi|164602919|gb|EDQ96384.1| hypothetical protein CLOBAR_02151 [Clostridium bartlettii DSM 16795] Length = 321 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 83/237 (35%), Gaps = 59/237 (24%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 + + I I G+IE + +I + I D +++ L++ GG Sbjct: 116 TKDDKTIQCITIIGEIEGHFVGNPQKKATKYEHVIPMLYSIEEDPEIKGILIILNTVGGD 175 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS-----------L 128 AG A+ I + K V+T V + S G ++ A + A ++ L Sbjct: 176 VEAGLAMAELINSIS--KKVVTLVLGGSHSIGVPLATAGDYSFIAPSATMIVHPIRTNGL 233 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 V IGV + Y K +++ + + + ++ + + + + Sbjct: 234 V--IGVNETFEYFKKMQERI---NEFITRTSN---------ISEEELTRL----MHAKDE 275 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 V V G + G EA GLI+ VGG +E L L + + Sbjct: 276 LVSDV----------------GSVLIGKEAVDCGLINEVGGLKESLTKLKELIKEDN 316 >gi|312136185|ref|YP_004003523.1| hypothetical protein Calow_2220 [Caldicellulosiruptor owensensis OL] gi|311776236|gb|ADQ05723.1| protein of unknown function DUF114 [Caldicellulosiruptor owensensis OL] Length = 269 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 8/98 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E+I I D S +I+ +PGG A I RAI++ K++ V + Sbjct: 67 INDSEEVIRAIN--MTDPSIPLDIILH--TPGGLVLASLQIARAIKRHKSK--VTVHIPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK 142 A S G LI+ A++ IV E +++G + + ++P V Sbjct: 121 YAMSGGTLIALAADEIVMCEDAVLGPVDPQIGEFPAVS 158 >gi|300856458|ref|YP_003781442.1| ATP-dependent Clp protease proteolytic subunit [Clostridium ljungdahlii DSM 13528] gi|300436573|gb|ADK16340.1| ATP-dependent Clp protease proteolytic subunit [Clostridium ljungdahlii DSM 13528] Length = 194 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 39/195 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + GQ+ D + ++ ++ + D+ + + ++SPGGS AG AI+ +Q +++ Sbjct: 29 IVMLNGQVTDEAASSIVAQLLFLESDNPDSDINFYINSPGGSITAGMAIYDTMQYIRSD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A S + L P V + I+ Sbjct: 88 -VSTICVGMAASMGSFLLAAGAKGKRFALPNSEI-----LIHQPSVYGGMQGQATDIEIH 141 Query: 156 KS---SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K +SE+ K ++ ++ V+ Y Sbjct: 142 TKWLLGIKKKMNRLYSEMTGKPIEKIEKDVERDY-------------------------F 176 Query: 213 WTGAEAKKVGLIDVV 227 + EA GL+D + Sbjct: 177 MSAKEALDYGLVDKI 191 >gi|327400327|ref|YP_004341166.1| hypothetical protein Arcve_0419 [Archaeoglobus veneficus SNP6] gi|327315835|gb|AEA46451.1| protein of unknown function DUF114 [Archaeoglobus veneficus SNP6] Length = 289 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 35/190 (18%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +EDS++++ I R +D + + +PGG A I +AI+ + VI Sbjct: 73 VEDSEQILRAIRRTPKDQPID---LIIHTPGGLVLAATQIAKAIKAHPAKTTVIV--PHY 127 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ I+ +++G + L YP + K Sbjct: 128 AMSGGTLIALAADEIIMDPNAVLGPVDPQLMNYPAPSILKA--------ISKKDPKDI-- 177 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD----GRIWTG---- 215 +M D+ + + V E + +K ++ GR WT Sbjct: 178 ------DDQTLIMADIAEKAIKQVRDFVFELLKDRLGEEKAKEVATVLTEGR-WTHDYPI 230 Query: 216 --AEAKKVGL 223 AK++GL Sbjct: 231 TVEVAKQLGL 240 >gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex degensii KC4] gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex degensii KC4] Length = 200 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 37/197 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q ++ Sbjct: 31 IIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPGGLVTAGMAIYDTMQYIRPD- 89 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS A +L++ + A + + + + F + Sbjct: 90 -VSTICLGQAASMAAFLLAAGAKGKRYALPYAR------IMLHQPLGGFQGQA------- 135 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 V++ + L+S+ P +K +D + T Sbjct: 136 -----------------TEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMT 178 Query: 215 GAEAKKVGLIDVVGGQE 231 +AK GLID V Sbjct: 179 AQQAKDYGLIDEVITMR 195 >gi|159905311|ref|YP_001548973.1| hypothetical protein MmarC6_0926 [Methanococcus maripaludis C6] gi|159886804|gb|ABX01741.1| protein of unknown function DUF114 [Methanococcus maripaludis C6] Length = 274 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I D + L +PGG A E I A+++ K + VI + Sbjct: 66 TIEDSEEILRAIRLTPEDMPID---LILHTPGGLVLASEQIATALKEHKAKTTVI--IPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ I+ + +++G + + QYP Sbjct: 121 YAMSGGSLIALAADEIIIDKNAVMGPVDPQVGQYP 155 >gi|288817635|ref|YP_003431982.1| putative serine proteases [Hydrogenobacter thermophilus TK-6] gi|288787034|dbj|BAI68781.1| putative serine proteases [Hydrogenobacter thermophilus TK-6] gi|308751233|gb|ADO44716.1| protein of unknown function DUF114 [Hydrogenobacter thermophilus TK-6] Length = 288 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D + + +PGG A A I A+ + K PV V Sbjct: 79 IEDSEQVLRAIRMTPEDMPID---LIIHTPGGLALAATQIANALSRHKA--PVRVIVPHY 133 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV +++G Sbjct: 134 AMSGGTLIALAADEIVMDHNAVLG 157 >gi|46241461|gb|AAS82930.1| capsid protein [Wolbachia phage WO] Length = 136 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q VD Y F++ ++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVDRLYEMFLQXIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|323705387|ref|ZP_08116962.1| peptidase S14 ClpP [Thermoanaerobacterium xylanolyticum LX-11] gi|323535289|gb|EGB25065.1| peptidase S14 ClpP [Thermoanaerobacterium xylanolyticum LX-11] Length = 232 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 79/208 (37%), Gaps = 47/208 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I + L++ L++ GG AG AI I + KP ++ V S Sbjct: 61 EHIIPQLVAIEENPQIKGLLILLNTVGGDVEAGLAIAEMISSLS--KPTVSIVLGGGHSI 118 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ +SN ++ + G IGV + Y D++ V +++S +K Sbjct: 119 GVPLAVSSNYSFIVPSATMTIHPIRMTGLVIGVPQTFDYFNKMQDRI-VEF-VIRNSRIK 176 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAK 219 + M ++ K L++ G I G EA Sbjct: 177 RD------------AFMNLML--------------------KIGELANDVGTILVGKEAV 204 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIR 247 GLID VGG E + L L ++ R Sbjct: 205 DYGLIDEVGGVSEAIEKLQQLIKEKENR 232 >gi|302872874|ref|YP_003841510.1| hypothetical protein COB47_2288 [Caldicellulosiruptor obsidiansis OB47] gi|302575733|gb|ADL43524.1| protein of unknown function DUF114 [Caldicellulosiruptor obsidiansis OB47] Length = 269 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E++ I D S +I+ +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVVRAIN--MTDPSIPLDIILH--TPGGLVLASLQIARAIKRHKGK--VTVHVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK 142 A S G LI+ A++ IV E +++G + + ++P V Sbjct: 121 YAMSGGTLIALAADEIVMCEDAVLGPVDPQIGEFPAVS 158 >gi|228966903|ref|ZP_04127944.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228792798|gb|EEM40359.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar sotto str. T04001] Length = 241 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 52/254 (20%) Query: 31 VEDNSPHVARIAIRGQIE------------DSQELIERIERISRDDSATALIVSLSSPGG 78 + +S + A I I G I S + ++ + + + + ++SPGG Sbjct: 1 MSTDSSNSADIFIYGDIVRWVWEDYFPEDVSSNTFKDDLDALGD---VSTINLHVNSPGG 57 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 S + G AI+ +++ K + V V +AAS +I+ A + I + S+ Sbjct: 58 SVFEGIAIYNMLKRHKAK--VNVYVDALAASIASVIAMAGDTIYMPKNSM---------- 105 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + + ++ ++ + + Q +Y Sbjct: 106 -----LMIHNPWTWTEGNATELRKAADDLDRIGNSSKQ--------TYLQ-----KAGEK 147 Query: 199 IPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + + + D W + EA + GL DVV EE Q +L D K N PK Sbjct: 148 LTDEMLQEMLDAETWLSADEAYEYGLCDVV---EEANQMAASLDKD---VLSKYKNVPKQ 201 Query: 258 YWFCDLKNLSISSL 271 D LS + Sbjct: 202 LKNQDETKLSADEM 215 >gi|297521420|ref|ZP_06939806.1| putative periplasmic protease [Escherichia coli OP50] Length = 162 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ-----ELIERIERISRDDSATALIVSLSSPGGSAY 81 D+ P V + +G ++ + E I + + +++ L SPGG + Sbjct: 74 LGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQ--VVLRLESPGGMVH 131 Query: 82 AGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 +Q+++++ P+ V ++AAS G Sbjct: 132 GYGLAASQLQRLRDKNIPLTVTVDKVAASGG 162 >gi|312794671|ref|YP_004027594.1| hypothetical protein Calkr_2556 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181811|gb|ADQ41981.1| protein of unknown function DUF114 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 269 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 31/188 (16%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E+I I D S +I+ +PGG A I RAI++ + V V Sbjct: 67 INDSEEVIRAIS--MTDSSVPLDIILH--TPGGLVLASLQIARAIKR--HTGKVTVHVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ IV A +++G + + ++P V + VK P+ Sbjct: 121 HAMSGGTLIALAADEIVMAPDAVLGPVDPQIGEFPAVSIL--------EVVKQKPIADID 172 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI---WTG------ 215 + A + ++ D+ N P D ++ + WT Sbjct: 173 DKTLILADVAKKALRQTKDAVLELLSG------NYPDDVAENIATQLVEGKWTHDYPITY 226 Query: 216 AEAKKVGL 223 +AK++GL Sbjct: 227 EKAKELGL 234 >gi|291298892|ref|YP_003510170.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728] gi|290568112|gb|ADD41077.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728] Length = 207 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 73/194 (37%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G +SQ + ++ ++ DD + + ++SPGGS Y G AI+ +Q + N Sbjct: 31 RIVFMGTEVNSQVANRVSAQLLLLAADDPERDINLYINSPGGSVYDGMAIYDTMQFISND 90 Query: 97 KPVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS G L+ CA A + + + Sbjct: 91 --VATIAMGMAASMGQLLLCAGTPGKRYALPHAR------IMMH---------------- 126 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW 213 +PS V ++ + + + F VS D+ SD R + Sbjct: 127 --------QPSGGIGGTASDVAILAEQMAYTKKMFQERVSTHTGRTLDEIERDSDRDRWF 178 Query: 214 TGAEAKKVGLIDVV 227 T EAK+ G ID V Sbjct: 179 TAEEAKEYGFIDQV 192 >gi|255944899|ref|XP_002563217.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587952|emb|CAP86021.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 258 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ++D S ++ ++ + D+ + + + ++SPGGS AG AI+ + + + Sbjct: 74 IICLNGQVDDTLSASIVAQLLFLEADNPSKPIHLYINSPGGSVTAGLAIYDTMTYIAS-- 131 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + S SI V + + Sbjct: 132 PVSTICVGQAASMGSLLLAGGEAGKRYCLPHS---SIMVHQPSGGYFGQASDIAIH---- 184 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K + ++ ++ Y R ++ + + D+ L + + G Sbjct: 185 ----------------AKEILRVRTQLNEIYQ---RHLTSKKKLSLDEIEKLMERDYFMG 225 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 226 AKEALELGVVDEI 238 >gi|205361507|gb|ACI03632.1| capsid protein [Wolbachia phage WO] Length = 134 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + + ++ ++D +D Y FV+L++ +R++ + ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSEGLKSLRDEIDRLYEMFVQLIARNRSLSIEAIKS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQ 235 V E Sbjct: 60 GVTTFFEFIN 69 >gi|124516220|gb|EAY57728.1| protein of unknown function [Leptospirillum rubarum] Length = 277 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + L +PGG A I A+ K PV V Sbjct: 67 IEDSEEILRAIKMTDPDTPID---LILHTPGGLVLASTQIAHALSNRKA--PVTVFVPHF 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ ++N IV E +++G Sbjct: 122 AMSGGTLIALSANRIVMDENAVLG 145 >gi|332141945|ref|YP_004427683.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551967|gb|AEA98685.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 209 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ ++ +K Sbjct: 38 VIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMRFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + S V + + F + S + Sbjct: 97 -VSTVCMGQAASMGAFLLSAGAKGKRYCLPNSRV------MIHQPLGGFQGQA--SDFEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K S + + ++ V+ R+ D + Sbjct: 148 HA---KEILSI--------KEKLNRLLADHTGQDYEKVA--RDTDRDN--------FLSA 186 Query: 216 AEAKKVGLIDVV 227 EAK+ GL+D V Sbjct: 187 TEAKEYGLVDQV 198 >gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus N315] gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MW2] gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus COL] gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus RF122] gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus JH9] gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus JH1] gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit homologue [Staphylococcus aureus subsp. aureus Mu3] gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus TCH130] gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053] gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322] gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397] gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus E1410] gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876] gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781] gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A9763] gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719] gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9635] gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9299] gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A8115] gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6300] gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6224] gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5948] gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5937] gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30] gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3] gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ED98] gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117] gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus C160] gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260] gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WBG10049] gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M899] gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139] gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427] gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765] gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101] gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102] gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp. aureus H19] gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus A017934/97] gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus 132] gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424] gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809] gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M1015] gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754] gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819] gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MR1] gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796] gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MN8] gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus TCH70] gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54036854|sp|P63786|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|54036862|sp|P99089|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|54040892|sp|P63785|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|56748671|sp|Q6GB62|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|56748685|sp|Q6GIM3|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460165|sp|Q5HHQ0|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|90183185|sp|Q2YSF8|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|116243169|sp|Q2G036|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|124013828|sp|Q2FIM5|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166214713|sp|A7WZR9|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|172048797|sp|A6QF76|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082468|sp|A6TZP7|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082469|sp|A5IQX2|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082470|sp|A8Z045|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315] gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue [Staphylococcus aureus subsp. aureus Mu50] gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2] gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus COL] gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus RF122] gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus JH9] gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus JH1] gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue [Staphylococcus aureus subsp. aureus Mu3] gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein [Staphylococcus aureus subsp. aureus TCH130] gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053] gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322] gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397] gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus E1410] gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876] gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781] gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A9763] gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719] gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9635] gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A9299] gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus aureus A8115] gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6300] gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus A6224] gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5948] gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus A5937] gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3] gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30] gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ED98] gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit [Staphylococcus aureus subsp. aureus TW20] gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101] gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427] gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139] gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M899] gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WBG10049] gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260] gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102] gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765] gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus C160] gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117] gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp. aureus H19] gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ST398] gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus A017934/97] gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus 04-02981] gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus M1015] gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424] gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809] gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754] gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819] gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16] gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796] gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus MN8] gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ED133] gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus TCH70] gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus JKD6159] gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus TCH60] gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus CGS03] gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus CGS00] gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus CGS01] gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus MRSA131] gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus MRSA177] gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus O11] gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus O46] gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus aureus subsp. aureus T0131] gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21189] gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21172] gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21193] Length = 195 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 41/200 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A + V + + ++ ++ Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQATEIEIAA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + K SE ++++ +Q D F+ Sbjct: 141 NHILKTREK-LNRILSERTGQSIEKIQKDTDR--DNFL---------------------- 175 Query: 213 WTGAEAKKVGLIDVVGGQEE 232 T EAK+ GLID V E Sbjct: 176 -TAEEAKEYGLIDEVMVPET 194 >gi|57234158|ref|YP_181801.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative [Dehalococcoides ethenogenes 195] gi|57224606|gb|AAW39663.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative [Dehalococcoides ethenogenes 195] Length = 242 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 66/192 (34%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + G+I D E+ ++ + + + ++SPGG +A I+ + + Sbjct: 23 LYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGDVFAAAQIYNMLMDYPHD 82 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A + + ++ + + + ++ Sbjct: 83 --VTVKIDALAASAASVIAMAGTKVCMSPVAM------MMIH------------NPATIA 122 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + +Q D+++ + + K L D W Sbjct: 123 IGDT------------EEMQKAIDMLNEVKESIMNAYEIKSGLSRHKISQLMDAETWMNA 170 Query: 216 AEAKKVGLIDVV 227 EA K+G D + Sbjct: 171 KEAVKLGFADEI 182 >gi|229199634|ref|ZP_04326284.1| Clp protease [Bacillus cereus m1293] gi|228583836|gb|EEK42004.1| Clp protease [Bacillus cereus m1293] Length = 198 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 + ++SPGG + AI ++ K + V + +AAS G +I+ A++ IV + ++ Sbjct: 15 IHINSPGGDVFESIAIHNLLKNHKAK--VNVYIDGLAASGGSVIAMAADKIVMPKNTM 70 >gi|167766697|ref|ZP_02438750.1| hypothetical protein CLOSS21_01203 [Clostridium sp. SS2/1] gi|317497526|ref|ZP_07955845.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA] gi|167711634|gb|EDS22213.1| hypothetical protein CLOSS21_01203 [Clostridium sp. SS2/1] gi|291558361|emb|CBL37161.1| Protease subunit of ATP-dependent Clp proteases [butyrate-producing bacterium SSC/2] gi|316895209|gb|EFV17372.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA] Length = 216 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 88/224 (39%), Gaps = 55/224 (24%) Query: 38 VARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + I G+IE Q +I + ++ +D+S +++ +++ GG G A Sbjct: 20 IFTMTIIGEIEGHQLSAQNAKTTKYEHMIPALAKVEQDESIKGILILINTIGGDVECGLA 79 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL-----VGS----IGVLF 136 I I + KP ++ V + S G ++ A++ +++ V S IGV+ Sbjct: 80 IAELIASLS--KPTVSLVLGGSHSIGVPLAVAADHSFIVKSATMMIHPVRSSGTFIGVIQ 137 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Y ++ D+ + + S ++ + V+ + + V+ V Sbjct: 138 SYRNIEKIQDR-------ITT-----FISDHCKMKKERVEELMLHI----GQQVKDV--- 178 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I +G EA K GLID +GG +E L + Sbjct: 179 -------------GMILSGEEAVKEGLIDEMGGIKEATDRLIEI 209 >gi|289578373|ref|YP_003477000.1| peptidase S14 ClpP [Thermoanaerobacter italicus Ab9] gi|297544650|ref|YP_003676952.1| peptidase S14 ClpP [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528086|gb|ADD02438.1| peptidase S14 ClpP [Thermoanaerobacter italicus Ab9] gi|296842425|gb|ADH60941.1| peptidase S14 ClpP [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 233 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 47/199 (23%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I + + +++ L++ GG AG AI I + KP ++ V S Sbjct: 62 EHIIPQLVAIEENPNIKGVLILLNTVGGDVEAGLAIAEMIASLS--KPTVSIVLGGGHSI 119 Query: 111 GYLISCASNIIVAAETS--------LVGS-IGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ ++N ++ + G +GV + Y D++ V V++S +K Sbjct: 120 GVPLAVSANYSYIVPSATMTIHPIRMTGMVVGVPQTFDYFNKMQDRI-VEF-IVRNSKIK 177 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAK 219 + +++ KT L++ G I G EA Sbjct: 178 -------------RETFMELM-------------------LKTGELANDIGTILVGKEAV 205 Query: 220 KVGLIDVVGGQEEVWQSLY 238 GLID +GG +E L+ Sbjct: 206 DYGLIDEIGGIKEALNMLH 224 >gi|205361509|gb|ACI03633.1| capsid protein [Wolbachia phage WO] Length = 134 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + + ++ +++ +D Y FV+L++ +R++ + ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSEGLKSLREEIDRLYEMFVQLIARNRSLSIEAIKS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VVGGQEEVWQ 235 V E Sbjct: 60 GVTTFFEFIN 69 >gi|159041798|ref|YP_001541050.1| hypothetical protein Cmaq_1233 [Caldivirga maquilingensis IC-167] gi|157920633|gb|ABW02060.1| protein of unknown function DUF114 [Caldivirga maquilingensis IC-167] Length = 292 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 26/176 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ + I I + +++ L +PGG A I RA++ +K I V Sbjct: 75 IEDSEAV---IRAIRTTPPSMPIMLILHTPGGLVLAASQIARALKSHPAKK--IVVVPHY 129 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI---KSVKSSPMKAE 163 A S G LI+ A++ IV + +++G + P GV +++ +K Sbjct: 130 AMSGGTLIALAADEIVMDQNAVLGPLDPQLGGPG--------GVYYPAPSILRAVEVKG- 180 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSD---GRIWT 214 + ++ DV + S LV E + ++ ++D G +T Sbjct: 181 ----RDKVDDETLILADVAEKSLRQVKELVMELLRGKVNDERVEEIADKLVGGYYT 232 >gi|269837882|ref|YP_003320110.1| hypothetical protein Sthe_1855 [Sphaerobacter thermophilus DSM 20745] gi|269787145|gb|ACZ39288.1| protein of unknown function DUF107 [Sphaerobacter thermophilus DSM 20745] Length = 456 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 85/223 (38%), Gaps = 37/223 (16%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATA 68 R +L L + + V+ +P V + I G I + + + R A+A Sbjct: 12 RLTILITAVLLALASMIAPGVQAATPSVMLLDIDGAITPVVANYVERGLRDAERV-GASA 70 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAE 125 +++ +++PGG + A I I + PVI V A SAG I+ A+++ A Sbjct: 71 VVLRMNTPGGLSSAMNDITTDI--FASPVPVIVYVAPSGARAGSAGVYITYAAHVAAMAP 128 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ +GS ++P + M Q VV+ + Sbjct: 129 STNIGS-------------------------ATP--VFLDDSGQPQDADDAMTQKVVNDA 161 Query: 186 YHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVV 227 +R +E+R D + + T +A ++ +ID++ Sbjct: 162 VAQ-IRGFAEARGRNADWAEQAVREAANITAQQALELNVIDLI 203 >gi|32476642|ref|NP_869636.1| ATP-dependent Clp protease proteolytic subunit [Rhodopirellula baltica SH 1] gi|67460513|sp|Q7UK67|CLPP1_RHOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|32447188|emb|CAD77014.1| ATP-dependent clp protease proteolytic subunit [Rhodopirellula baltica SH 1] Length = 227 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + ++G+I ++ E++ ++ + ++ + + ++SPGGS A AI+ +Q + Sbjct: 55 IVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGGSVTATLAIYDTMQMLSC-- 112 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S LI A S V + + + VS + Sbjct: 113 PVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRV------MMHQPLGGVSGQ--VSDIEI 164 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT- 214 +++ M + +++ S ++ +D + Sbjct: 165 QAAEMFRY-----------RDKLNEIISSHC-----------GKSVEQIAKDTDRDFFLD 202 Query: 215 GAEAKKVGLIDVV 227 +AK+ GL+D + Sbjct: 203 AQQAKEYGLVDDL 215 >gi|316936727|gb|ADU60358.1| capsid protein [Wolbachia phage WO] gi|316936729|gb|ADU60359.1| capsid protein [Wolbachia phage WO] Length = 137 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++++ +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAIEIGLADG 61 Query: 227 V 227 + Sbjct: 62 I 62 >gi|302392320|ref|YP_003828140.1| peptidase S49 [Acetohalobium arabaticum DSM 5501] gi|302204397|gb|ADL13075.1| peptidase S49 [Acetohalobium arabaticum DSM 5501] Length = 282 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 83/229 (36%), Gaps = 55/229 (24%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I GQIE + LI ++ + ++ +I++L++ GG AG AI Sbjct: 61 INIVGQIEGHRSLPPKNKTTKYEHLIPQLVAVEQNPKVKGVIITLNTVGGDIEAGLAISE 120 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + + KP ++ V S G I+ A++ AET+ + +P ++ + Sbjct: 121 MLSSLS--KPTVSLVLGGGHSIGGPIAVATDKSFIAETA------TMTIHP-IRLTGKVI 171 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL- 207 GV + MQD V + VS NI + L Sbjct: 172 GV------------------PQTYDYLDKMQDRV-------INFVSRHSNISNEDFRNLM 206 Query: 208 -SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G + G EA G+ID VGG + ++L + K Sbjct: 207 FRTGELVRDVGTVLIGEEAVDKGMIDEVGGLSQAIKALKEKIDAEEDNK 255 >gi|121534809|ref|ZP_01666629.1| protein of unknown function DUF107 [Thermosinus carboxydivorans Nor1] gi|121306604|gb|EAX47526.1| protein of unknown function DUF107 [Thermosinus carboxydivorans Nor1] Length = 436 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 98/267 (36%), Gaps = 44/267 (16%) Query: 11 RYVMLSLVTLTVVYFSWSSH---VEDNSPHVARIAIRGQIEDSQE-LIERIERISRDDSA 66 RY L++V L ++ FS+ D+ V I I+G+I SQ L+ R+ + A Sbjct: 2 RYKPLAVVFLLILVFSFVEPTVLAADDRQPVLLIPIKGEINGSQAALVRRVLTEASAQKA 61 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 A+++ + + GG AI I + P I V A SAG LI+ A IV A Sbjct: 62 QAVLIEIDTFGGLVDPAVAIRDII--IDYPLPTICYVKNRAWSAGALIALAHKHIVIAPG 119 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS- 185 GS+G P + + L ++ K P ++ + +VD + Sbjct: 120 ---GSLGAAEPIPATEKTIAALKAEF---AATANKRGRDP---------RIAEAMVDKTL 164 Query: 186 ----YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 Y + L L+D +A++VG D+V E Y L Sbjct: 165 GLPGYAQ------------PGQILALTD------YQAQQVGYADLVAPDRETVLRRYGLE 206 Query: 242 VDQSIRKIKDWNPPKNYWFCDLKNLSI 268 I W W D S+ Sbjct: 207 NAPLIEHAPGWAERAAGWLSDPMVKSL 233 >gi|206975220|ref|ZP_03236134.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus H3081.97] gi|206746641|gb|EDZ58034.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus H3081.97] Length = 251 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 43/207 (20%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 14 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IETINLYINSPGGSVF 71 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + + VI+ + + AS ++ S+ I+ S+ + + Sbjct: 72 ETMAIIAMLQRHQAK--VISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 120 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + + ++ Q +V L + Sbjct: 121 ---------NAWTYASGN----ANQLRKAADDIERINQSMVQHY------LTRAGDKLDE 161 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + EA GL D + Sbjct: 162 DTLKQLLDAETWLSAEEAMNYGLCDEI 188 >gi|239638102|ref|ZP_04679061.1| serine protease [Staphylococcus warneri L37603] gi|239596385|gb|EEQ78923.1| serine protease [Staphylococcus warneri L37603] Length = 258 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 35/187 (18%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G Q + E+++ + ++V+++S GG ++G I+ +++ + Sbjct: 16 TIEGMTISPQTVREQLKAMGD---VDEVVVNINSNGGDVFSGVTIYNMLRRFDAH--ITV 70 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 V +AAS +I+ A + I ++ L + + +V + Sbjct: 71 NVDGLAASIASVIAMAGDTINMPGNAM------LMVH------------NAWTVNEGDAR 112 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + + + ++ + VV F V ++ +I + D W T EAKK Sbjct: 113 SF-----KKRAEDLERINSVV------FNSYVDKNPDIDHALLQDYMDEETWLTAKEAKK 161 Query: 221 VGLIDVV 227 +GLID + Sbjct: 162 LGLIDNI 168 >gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus lugdunensis HKU09-01] gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus lugdunensis M23590] gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus lugdunensis HKU09-01] gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus lugdunensis M23590] Length = 195 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + R+++E ++ +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 T EAK GLID V E+ Sbjct: 176 TAEEAKAYGLIDEVMEPED 194 >gi|84391274|ref|ZP_00991605.1| ATP-dependent protease [Vibrio splendidus 12B01] gi|84376563|gb|EAP93441.1| ATP-dependent protease [Vibrio splendidus 12B01] Length = 670 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 72/200 (36%), Gaps = 41/200 (20%) Query: 33 DNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N V ++ + G I D+ E+I ++ + + + + S GGS Y G A++ Sbjct: 12 KNEADVIKVWVHGDISAWDIDATEIIAALQVA----NGKEVELRMLSGGGSVYQGLAMYN 67 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A++ K + V+ V MAAS + A + I E ++ L + Sbjct: 68 ALKAHKGK--VVGIVDGMAASIATYVLLACDSIRMPENAM------LMIHNPAIGAW--- 116 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 K S + +Q + +Y +E P ++ L Sbjct: 117 ---------GGEKEINSAL-----QQLQAATKTISEAY-------AEKSGQPLEEVLTAM 155 Query: 209 DGRIW-TGAEAKKVGLIDVV 227 + W T AK GL+D V Sbjct: 156 ESETWFTAQAAKDWGLVDEV 175 >gi|300766160|ref|ZP_07076125.1| ClpP protease [Listeria monocytogenes FSL N1-017] gi|300513118|gb|EFK40200.1| ClpP protease [Listeria monocytogenes FSL N1-017] Length = 265 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 54/263 (20%) Query: 40 RIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +I ++G I + + + I + S + V ++S GG +AG I+ Sbjct: 3 KIEVKGPIIGNDDKWIYDWLDMEATCAKDINEALANAS-GEVEVWINSNGGDVFAGSEIY 61 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 A++ V+ ++ MAASA +I+ A N ++ + T G + + Sbjct: 62 TALKSYNGN--VVVKIVGMAASAASVIAMAGNEVLISPT------GQMMIHNVQYGGR-- 111 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 G + K+S + Q + ++Y ++ L + Sbjct: 112 -GDYRELKKASEIA--------------QNANISIANAYQL-------KTGKTLEELLNM 149 Query: 208 SDGRIWT-GAEAKKVGLIDVVGGQEE-----VWQS---LYALGVDQSIRKIKDWNPPKNY 258 W +A ++GL D V QE + S + A +R +KD N ++ Sbjct: 150 MGEETWLNSQQAVELGLADGVMFQENSETPKLVASTGGMLAQATLDKVRGLKDTNGTQSI 209 Query: 259 WFCDLKNLSISSLLEDTIPLMKQ 281 + I S++EDTI +K Sbjct: 210 LEVSVSAEQIQSIVEDTIAKLKN 232 >gi|158320570|ref|YP_001513077.1| peptidase S14 ClpP [Alkaliphilus oremlandii OhILAs] gi|158140769|gb|ABW19081.1| peptidase S14 ClpP [Alkaliphilus oremlandii OhILAs] Length = 245 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 83/242 (34%), Gaps = 63/242 (26%) Query: 29 SHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSP 76 + + + + + I GQIE + +I ++ + D L+V L++ Sbjct: 42 NDLPQSDKSIYTMNIIGQIEGHMIAAPQNKSTKYEHIIPQLVAVEEDPKIKGLLVILNTM 101 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--------- 127 GG AG AI I + KP +T V S G ++ A + A T+ Sbjct: 102 GGDVEAGLAIAELIGSLS--KPTVTLVIGGGHSIGVPLATAGDYSFIAPTATMTIHPIRM 159 Query: 128 --LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 LV IG+ + Y +++ ++ S+ + +++++ Sbjct: 160 NGLV--IGIPQTFRYFLKMQERI-INFVLRTSNV--------------ERETFTSLMNAT 202 Query: 186 YHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 L++ G I G EA GLID VGG L L + Sbjct: 203 -------------------DELANDVGTILIGEEAVHHGLIDEVGGLNSAISKLKDLIRE 243 Query: 244 QS 245 Sbjct: 244 NE 245 >gi|163800611|ref|ZP_02194512.1| putative protease/scaffold protein [Vibrio sp. AND4] gi|159176054|gb|EDP60848.1| putative protease/scaffold protein [Vibrio sp. AND4] Length = 670 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 41/200 (20%) Query: 33 DNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 N V ++ + G I D+ E+I ++ + + + S GGS Y G A++ Sbjct: 12 KNEADVIKVWVHGDISAYDIDATEIIAALQVA----DGKEVELRMLSGGGSVYQGLAMYN 67 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 A++ K + V+ V MAAS + A + I E ++ L + Sbjct: 68 ALKAHKGK--VVGIVDGMAASIATYVLLACDSIRMPENAM------LMIH---------- 109 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + K S ++ + + V+ S P + L Sbjct: 110 --NPSIGAWGGEKEINSALQQLQAATKTISEAYVEKS------------GQPLEDVLTAM 155 Query: 209 DGRIW-TGAEAKKVGLIDVV 227 + W T AK GL+D V Sbjct: 156 ESETWFTAQAAKDWGLVDEV 175 >gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus capitis SK14] gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus capitis SK14] Length = 195 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + R+++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 T EAK+ GLID V E Sbjct: 176 TAEEAKEYGLIDEVMEPES 194 >gi|160939827|ref|ZP_02087174.1| hypothetical protein CLOBOL_04718 [Clostridium bolteae ATCC BAA-613] gi|158437261|gb|EDP15026.1| hypothetical protein CLOBOL_04718 [Clostridium bolteae ATCC BAA-613] Length = 315 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 55/233 (23%) Query: 37 HVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + I I G++E + ++ ++ I DDS L+V L++ GG AG Sbjct: 117 KIHLITIIGEVEGHENSSGSSKTTKYDHILPKLAEIEDDDSVDGLLVLLNTSGGDVDAGL 176 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI I + P ++ V + S G ++ ++N + G + +P Sbjct: 177 AIAEMIASLSL--PTVSLVLGGSHSIGVPLAVSTNYSFIVPS------GTMMIHP----- 223 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V + + + + +M+QD + + VS +I YD+ Sbjct: 224 -----VRMTGMVIG---------TSQTYEYFEMIQDRI-------LTFVSNHADIAYDQL 262 Query: 205 LVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 L G + G +A + GLI+ VGG +E LYA+ D+ R+ Sbjct: 263 RELMHNTKMLTRDLGTVLVGTQAVEAGLINQVGGIKEALGKLYAMIDDRERRR 315 >gi|119486045|ref|ZP_01620107.1| hypothetical protein L8106_05975 [Lyngbya sp. PCC 8106] gi|119456820|gb|EAW37948.1| hypothetical protein L8106_05975 [Lyngbya sp. PCC 8106] Length = 291 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I A+ + + + V V Sbjct: 68 SIEDSEQVLRAIRLTPSDVPID---LILHTPGGLVLATEQIAHALIRHQAK--VTVFVPH 122 Query: 106 MAASAGYLISCASNIIVAAETSLVGSI 132 A S G +++ AS+ IV E +++G I Sbjct: 123 YAMSGGTMLALASDEIVMDENAVLGPI 149 >gi|289522312|ref|ZP_06439166.1| peptidase S49 family, nonpeptidase-like protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504148|gb|EFD25312.1| peptidase S49 family, nonpeptidase-like protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 278 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I+ +D + + +PGG A E I A+ K + V V Sbjct: 66 SIEDSEEVLRAIKLTPKDMPID---LIIHTPGGVLLAAEQIANALSKHDAK--VTVFVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV E +++G Sbjct: 121 YAMSGGTLIALAADEIVMDENAVLG 145 >gi|17231317|ref|NP_487865.1| hypothetical protein alr3825 [Nostoc sp. PCC 7120] gi|17132959|dbj|BAB75524.1| alr3825 [Nostoc sp. PCC 7120] Length = 297 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 14/214 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I RA+ + + V V Sbjct: 68 TIEDSEQILRAIRLTPPDVPID---LILHTPGGLVLATEQIARALIRHSAK--VTVFVPH 122 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G +++ A++ IV +++G + Q V K + + + Sbjct: 123 YAMSGGTMLALAADEIVMDANAVLGPVDP--QLGNFPAASILKVVKDKPI--GEIDDQTL 178 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTGAEAKK 220 +++ KA+Q +Q V + + + L+ GR+ T EA + Sbjct: 179 IMADLAGKAIQQVQRFVRTLLKDNIPKQKVNPENIESIIEALTTGRVTHDYPITVEEATE 238 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +GL VG +++ + Q R + P Sbjct: 239 MGLPITVGLPRSIYELMDLYPQSQGGRPSVQYIP 272 >gi|160934088|ref|ZP_02081475.1| hypothetical protein CLOLEP_02951 [Clostridium leptum DSM 753] gi|156866761|gb|EDO60133.1| hypothetical protein CLOLEP_02951 [Clostridium leptum DSM 753] Length = 291 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 47/209 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I + L+V L++ GG AG AI + +K KP ++ V S Sbjct: 86 EHVLPQLVAIEEEPRIDGLLVLLNTVGGDVEAGLAIAELLAGMK--KPTVSMVLGGGHSI 143 Query: 111 GYLISCASNI-IVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 G ++ A+ +A S+ +P + + LGV Sbjct: 144 GVPLAVAAKKSFIAKSASMT-------IHPVRMSGLV--LGV------------------ 176 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---------GRIWTGAEAK 219 P+ ++ Q + D V+E+ NI ++ LS G + G +A Sbjct: 177 ---PQTLEYFQRMQDRI----TSFVAENSNITPERFYELSMNTEELVMDVGTVLDGEDAV 229 Query: 220 KVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 K GLID +G + Q LY + + K Sbjct: 230 KEGLIDRLGNLSDALQCLYDMIDEYRASK 258 >gi|75908095|ref|YP_322391.1| hypothetical protein Ava_1874 [Anabaena variabilis ATCC 29413] gi|75701820|gb|ABA21496.1| Protein of unknown function DUF114 [Anabaena variabilis ATCC 29413] Length = 297 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 14/214 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I RA+ + + V V Sbjct: 68 TIEDSEQILRAIRLTPPDVPID---LILHTPGGLVLATEQIARALIRHSAK--VTVFVPH 122 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G +++ A++ IV +++G + Q V K + + + Sbjct: 123 YAMSGGTMLALAADEIVMDANAVLGPVDP--QLGNFPAASILKVVKDKPI--GEIDDQTL 178 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-----WTGAEAKK 220 +++ KA+Q +Q V + + + L+ GR+ T EA + Sbjct: 179 IMADLAAKAIQQVQRFVRTLLKDNIPKQKVNPENIESIIEALTTGRVTHDYPITVEEATE 238 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 +GL VG +++ + Q R + P Sbjct: 239 MGLPITVGLPHSIYELMDLYPQPQGGRPSVQYIP 272 >gi|30263954|ref|NP_846331.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Ames] gi|47778244|ref|YP_020737.2| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186802|ref|YP_030054.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Sterne] gi|165872161|ref|ZP_02216800.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0488] gi|167640964|ref|ZP_02399221.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0193] gi|254683648|ref|ZP_05147508.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. CNEVA-9066] gi|254735992|ref|ZP_05193698.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Western North America USA6153] gi|254743884|ref|ZP_05201567.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Kruger B] gi|254754338|ref|ZP_05206373.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Vollum] gi|254757970|ref|ZP_05209997.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Australia 94] gi|30258598|gb|AAP27817.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Ames] gi|47551949|gb|AAT33212.2| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180729|gb|AAT56105.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. Sterne] gi|164712108|gb|EDR17646.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0488] gi|167511014|gb|EDR86403.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0193] Length = 251 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 43/207 (20%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 14 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IKTINLYINSPGGSVF 71 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + +I+ + + AS ++ S+ I+ S+ + + Sbjct: 72 ETMAIIAMLQRHHAK--IISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 120 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + ++ Q +V L + Sbjct: 121 ---------NAWTYASGN----ADQLRKAADDIERINQSMVQHY------LTRAGDKLDE 161 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + EA GL D + Sbjct: 162 DTLKQLLDAETWLSAEEAMGYGLCDEI 188 >gi|89073230|ref|ZP_01159760.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp. SKA34] gi|90579278|ref|ZP_01235088.1| ATP-dependent Clp protease proteolytic subunit [Vibrio angustum S14] gi|89050940|gb|EAR56404.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp. SKA34] gi|90440111|gb|EAS65292.1| ATP-dependent Clp protease proteolytic subunit [Vibrio angustum S14] Length = 207 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + +V R+ D Sbjct: 153 AQEILT----------------IKQRLNGLLAEHTGQPLEVVE--RDTDRDN-------- 186 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V Q + Sbjct: 187 FMSAEQAVEYGLVDAVLSQRD 207 >gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus caprae C87] gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus caprae C87] Length = 195 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 39/198 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + R+++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQE 231 T EAK+ GLID V E Sbjct: 176 TAEEAKEYGLIDEVMEPE 193 >gi|297619933|ref|YP_003708038.1| hypothetical protein Mvol_1409 [Methanococcus voltae A3] gi|297378910|gb|ADI37065.1| protein of unknown function DUF114 [Methanococcus voltae A3] Length = 293 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+E++ I + + L +PGG A E I A+ + K + VI + Sbjct: 67 SIEDSEEVLRAIRLTPENMPID---LILHTPGGLVLASEQIASALMEHKAKTTVI--IPH 121 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ I+ + +++G + + QYP Sbjct: 122 YAMSGGSLIALAADEIIMDKNAVMGPVDPQIGQYP 156 >gi|212639505|ref|YP_002316025.1| protease subunit of ATP-dependent Clp protease [Anoxybacillus flavithermus WK1] gi|212560985|gb|ACJ34040.1| Protease subunit of ATP-dependent Clp protease [Anoxybacillus flavithermus WK1] Length = 237 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 82/225 (36%), Gaps = 63/225 (28%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + I GQIE + LI +I I ++ + L+V L++ GG AG AI Sbjct: 39 LTIVGQIEGHIQLPPQNKTTKYEHLIPQIVAIEQNPNIEGLLVVLNTVGGDVEAGLAIAE 98 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 + + KP ++ V S G I+ + + AET+ + +P Sbjct: 99 MLASMS--KPTVSIVLGGGHSIGVPIAVSCDYSFIAETA------TMTIHP--------- 141 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + + + + MQ+ V V V + NI +K L Sbjct: 142 -IRLTGLVIGV---------PQTFEYLDKMQERV-------VNFVVKHSNISEEKLKEL- 183 Query: 209 DGRIWT-------------GAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ G +A K GLID VGG + + L L Sbjct: 184 ---MFSKGNLTRDIGTNVVGTDAVKYGLIDEVGGLSQAMRKLREL 225 >gi|327540247|gb|EGF26836.1| Peptidase S14, ClpP [Rhodopirellula baltica WH47] Length = 205 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + ++G+I ++ E++ ++ + ++ + + ++SPGGS A AI+ +Q + Sbjct: 33 IVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGGSVTATLAIYDTMQMLSC-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S LI A S V + + + VS + Sbjct: 91 PVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRV------MMHQPLGGVSGQ--VSDIEI 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT- 214 +++ M + +++ S ++ +D + Sbjct: 143 QAAEMFRY-----------RDKLNEIISSHC-----------GKSVEQIAKDTDRDFFLD 180 Query: 215 GAEAKKVGLIDVV 227 +AK+ GL+D + Sbjct: 181 AQQAKEYGLVDDL 193 >gi|228959905|ref|ZP_04121572.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799786|gb|EEM46736.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 260 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 54/232 (23%) Query: 38 VARIAIRGQIEDSQE----------------LIERIERISRDDSATALIVSLSSPGGSAY 81 +I ++G I + E + + + + DD LIV ++SPGG + Sbjct: 2 TVKIDVKGPIISNDEAWIYDWFEMDAASPGKISKELTNANGDD----LIVLINSPGGYVH 57 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G I+ A++ V ++ +AASA +I+ A + + + T+ + + Sbjct: 58 EGSEIYTALKNYPGN--VEVQIVGLAASAASVIAMAGDKVRISPTA------QIMIH--- 106 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 G + + ++ V S Sbjct: 107 -NASMWNG--------GDHRDMEKAAEMLKTTDRAIVNAYVIKS------------GKSE 145 Query: 202 DKTLVLSDGRIWTG-AEAKKVGLIDVVGGQE-EVWQSLYALGVDQSIRKIKD 251 ++ L + W G +A + +D + + +V + A V +K+ D Sbjct: 146 EELLNMMAEETWMGPQQALENNFVDEIMFMDNQVKMTASASTVAMLPQKVID 197 >gi|222831931|gb|EEE70408.1| predicted protein [Populus trichocarpa] Length = 183 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------ELIERIERISRDDSATALIVSLSSPGGSA 80 + E PH+ + +G I S+ E+ I DD +++ L SPGG Sbjct: 95 GETLAEKRKPHLFVLHFKGDISASETTALREEISAIIAVAKEDDE---VLLRLESPGGVV 151 Query: 81 YAGEAIFRAIQKVKNRK-PVITEVHEMAASAG 111 + + ++K R + V ++AAS G Sbjct: 152 HGYGLAASQLARLKQRNIKLTVAVDKVAASGG 183 >gi|331085734|ref|ZP_08334817.1| hypothetical protein HMPREF0987_01120 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406657|gb|EGG86162.1| hypothetical protein HMPREF0987_01120 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 235 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 70/192 (36%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + G+I D E+ ++ + D + V ++SPGG +A I+ + K Sbjct: 19 LFLNGEISDETWYGDEVTPKMFKEELQDGEGDITVWINSPGGDVFAAAQIYNMLMDYKGN 78 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A + + ++ + + +I Sbjct: 79 --VTVKIDGLAASAASVIAMAGTEVQMSPVAM------MMIH---------NPATIAIGD 121 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 SS MK EV ++ + ++Y + + L D W Sbjct: 122 SSEMKKAIDMLDEV--------KESIMNAYEI-------KTGLSRSRISHLMDAESWFNA 166 Query: 216 AEAKKVGLIDVV 227 +A ++G D + Sbjct: 167 KKAVELGFADKL 178 >gi|239995517|ref|ZP_04716041.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas macleodii ATCC 27126] Length = 209 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ ++ +K Sbjct: 38 VIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMKFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + S V + + F + S + Sbjct: 97 -VSTVCMGQAASMGAFLLSAGAKGKRYCLPNSRV------MIHQPLGGFQGQA--SDFEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K S + + ++ V+ R+ D + Sbjct: 148 HA---KEILSI--------KEKLNRLMADHTGQDYEKVA--RDTDRDN--------FLSA 186 Query: 216 AEAKKVGLIDVV 227 EAK+ GL+D V Sbjct: 187 TEAKEYGLVDQV 198 >gi|326202158|ref|ZP_08192028.1| peptidase S49 [Clostridium papyrosolvens DSM 2782] gi|325987953|gb|EGD48779.1| peptidase S49 [Clostridium papyrosolvens DSM 2782] Length = 251 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 83/236 (35%), Gaps = 57/236 (24%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + V ++ + I GQIE + +I ++ I L++ L+ Sbjct: 33 GTPEVPKEESNIHCLTIIGQIEGHILLPPHNKTTKYEHIIPQLVAIEESKQIEGLLLVLN 92 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLVGSIG 133 + GG AG AI + + KP ++ V S G ++ ++N +A+ ++ Sbjct: 93 TVGGDVEAGLAISEMVSSLS--KPTVSLVLGGGHSIGVPMAVSANHSFIASSATMT---- 146 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 +P + G+ I + MQ+ V V V Sbjct: 147 ---IHP-----IRMNGLVIGV--------------PQTYEYFDKMQERV-------VNFV 177 Query: 194 SESRNIPYDKTLVL-------SD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 I +K L ++ G + G EA + GLID VGG + + L L Sbjct: 178 CSHSGIKREKFRELMLKTGELANDVGTVLFGEEATQSGLIDQVGGLSDAIKKLNEL 233 >gi|197303514|ref|ZP_03168553.1| hypothetical protein RUMLAC_02236 [Ruminococcus lactaris ATCC 29176] gi|197297512|gb|EDY32073.1| hypothetical protein RUMLAC_02236 [Ruminococcus lactaris ATCC 29176] Length = 334 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + + G I + ++ + + + + + ++SPGG A IF + + Sbjct: 25 ILFMNGVIAEDSWFDDDVTPALFKDELNAGTGDITLWINSPGGDCVAAAQIFNMLSEYPG 84 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + V ++ +AASA +I+ A + + S+ + + + +V Sbjct: 85 K--VTVKIDGLAASAASVIAMAGTEVWMSPVSM------MMIH------------NPATV 124 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 KA++++ V +S + +VR +SR K L D W Sbjct: 125 AWGDHVEM--------KKAMELLDAVKESIINAYVRKTGQSR----AKLSHLMDAETWMD 172 Query: 215 GAEAKKVGLIDVV 227 +A ++G D + Sbjct: 173 ANKAVELGFADDI 185 >gi|56419065|ref|YP_146383.1| serine protease [Geobacillus kaustophilus HTA426] gi|56378907|dbj|BAD74815.1| serine protease (phage related-protein, ClpP family) [Geobacillus kaustophilus HTA426] Length = 255 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 43/211 (20%) Query: 27 WSSHVEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPG 77 W + + + A I I G I + + ++ + D+ + ++SPG Sbjct: 10 WEIKMSADGSNSADIFIYGDIVSYQWDETDTSAASFKKDLDAVGDVDTIN---LYINSPG 66 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G+ + G AI +++ K + + V +AAS +I+ A + I + ++ Sbjct: 67 GNVFEGVAIHNMLKRHKAK--INVYVDALAASIASVIAMAGDTIHMPKNAM--------- 115 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + ++ ++ + + + + +Y Sbjct: 116 ------LMIHNPWTWTYGNAAELRKV--------ADDLDRIGNSIKQTYLQ-----KAGD 156 Query: 198 NIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + +K + D W + EA + GL DVV Sbjct: 157 KLTEEKLQEMLDAETWLSADEAYEHGLCDVV 187 >gi|296132914|ref|YP_003640161.1| peptidase S49 [Thermincola sp. JR] gi|296031492|gb|ADG82260.1| peptidase S49 [Thermincola potens JR] Length = 270 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 82/232 (35%), Gaps = 55/232 (23%) Query: 30 HVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPG 77 +V ++ + I GQ+E + +I ++ + + ++V L++ G Sbjct: 60 NVPQMKSNIHVLPIVGQVEGHLVLPPQNKATKYEHIIPQLVALEENPEIEGVLVVLNTIG 119 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G AG AI I + KP ++ V S G I+ A++ AET+ + Sbjct: 120 GDVEAGLAIAEMITSMS--KPTVSLVLGGGHSIGVPIAVATDYSFIAETAG------MTV 171 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +P + + + + + MQD V V + + Sbjct: 172 HP----------IRLTGLVIGV---------PQTYEYLDKMQDRV-------VNFIIKHS 205 Query: 198 NIPYDKTLVL-------SD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 I K L + G + G +A VGLID VGG + L L Sbjct: 206 KISEAKLRELMFRTGELARDIGAVLIGKDAVDVGLIDEVGGVSQAMNKLREL 257 >gi|227818344|ref|YP_002822315.1| periplasmic serine protease [Sinorhizobium fredii NGR234] gi|227337343|gb|ACP21562.1| periplasmic serine protease [Sinorhizobium fredii NGR234] Length = 275 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 37/191 (19%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E++ ++ DD L + L +PGG A I RA++ K + V V Sbjct: 67 INDSEEVLRAVQ--MTDDDVP-LDLVLHTPGGLVLAALQIARAVRNHKGK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ IV S++G I L Q P +K + K Sbjct: 122 AMSGGTLIALAADEIVMCRHSVLGPIDPQLGQMPAAS-----------IIKVAEQK---- 166 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE---SRNIPYDKTL----VLSDGRIWTG--- 215 P +EV+ ++ + V + SR++ D + L+ G WT Sbjct: 167 PLAEVDDHT--LIMADIGRKAIRQVEAAAAALLSRHMDEDASRTLAAKLASG-TWTHDYP 223 Query: 216 ---AEAKKVGL 223 EAK +GL Sbjct: 224 ISPEEAKVMGL 234 >gi|206603020|gb|EDZ39500.1| Protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 277 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I+ D + L +PGG A I A+ K PV V Sbjct: 67 IEDSEEILRAIKMTDPDTPID---LILHTPGGLVLASTQIAHALSNRKA--PVTVFVPHF 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ +++ IV E +++G Sbjct: 122 AMSGGTLIALSASRIVMDENAVLG 145 >gi|228987450|ref|ZP_04147569.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772182|gb|EEM20629.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 240 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 43/207 (20%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 3 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IETINLYINSPGGSVF 60 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + + VI+ + + AS ++ S+ I+ S+ + + Sbjct: 61 ETMAIIAMLQRHQAK--VISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 109 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + + ++ Q +V L + Sbjct: 110 ---------NAWTYASGN----ANQLRKAADDIERINQSMVQHY------LTRAGDKLDE 150 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + EA GL D + Sbjct: 151 DTLKQLLDAETWLSAEEAMNYGLCDEI 177 >gi|168769871|ref|ZP_02794878.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486] gi|195937919|ref|ZP_03083301.1| putative protease/scaffold protein [Escherichia coli O157:H7 str. EC4024] gi|189361107|gb|EDU79526.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486] Length = 629 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 49/236 (20%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + I+ + + + + + SPGG + G AI+ A++ +K I + MAAS I+ Sbjct: 34 DEINACGNVSEIHLRIHSPGGDIFEGLAIYNALKNHPAKK--IVHIEGMAASMASFIAMC 91 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + IV E ++ + + + V + V+ Sbjct: 92 GDHIVMPENAM------MMIHA------------PRGVTAGVSGD------------VRR 121 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQS 236 D++D + + + + W G E K G D EV + Sbjct: 122 FADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFAD------EVIAA 175 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + A+ +S R N P+ I S++ +Q ++ G+ ++ Sbjct: 176 ITAMARIESKRIGDFSNMPEK----------IKSMISQKTTSGEQERLNGIRELFG 221 >gi|284161665|ref|YP_003400288.1| hypothetical protein Arcpr_0550 [Archaeoglobus profundus DSM 5631] gi|284011662|gb|ADB57615.1| protein of unknown function DUF114 [Archaeoglobus profundus DSM 5631] Length = 285 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I +D + + +PGG A I +A++ + VI Sbjct: 75 SIEDSEQVLRAIRMTPKDQPID---LIIHTPGGLVLAATQIAKALKNHPAKTTVIV--PH 129 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 130 YAMSGGTLIALAADEIIMDPNAVLG 154 >gi|194017679|ref|ZP_03056289.1| YqeZ [Bacillus pumilus ATCC 7061] gi|194010579|gb|EDW20151.1| YqeZ [Bacillus pumilus ATCC 7061] Length = 414 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Query: 37 HVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 V I I +E + IER ++ + A +I+ +++PGG+ A I I+ + Sbjct: 9 KVHVIPIEDTVEKGLSQFIERSFEQAKSERAKHIILDINTPGGAVDAALEIADTIR--AS 66 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 PV V+ A SAG ++ ++ I +G Sbjct: 67 DIPVTAFVNHRALSAGAFLALNADQIYMTPNGKMG 101 >gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis ATCC 12228] gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis RP62A] gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis W23144] gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis BCM-HMP0060] gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis SK135] gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W2(grey)] gi|38257586|sp|Q8CTE0|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460168|sp|Q5HQW0|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis ATCC 12228] gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis RP62A] gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis W23144] gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis BCM-HMP0060] gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis SK135] gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W2(grey)] gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus epidermidis FRI909] gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU144] gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU028] gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus epidermidis VCU045] Length = 194 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 41/199 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A + V + + ++ ++ Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQATEIEIAA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + K SE ++++ +Q D F+ Sbjct: 141 NHILKTREK-LNRILSERTGQSIEKIQQDTDR--DNFL---------------------- 175 Query: 213 WTGAEAKKVGLIDVVGGQE 231 T AEAK+ GLID V E Sbjct: 176 -TAAEAKEYGLIDEVMEPE 193 >gi|325967561|ref|YP_004243753.1| hypothetical protein VMUT_0034 [Vulcanisaeta moutnovskia 768-28] gi|323706764|gb|ADY00251.1| hypothetical protein VMUT_0034 [Vulcanisaeta moutnovskia 768-28] Length = 296 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I + +++ L +PGG A I +A++ +K + V Sbjct: 74 IEDSEAIVRAIRTTPPNTP---IMLILHTPGGLVLAASQIAKALKAHPAKK--VVVVPHY 128 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV +++G Sbjct: 129 AMSGGTLIALAADEIVMDPNAVLG 152 >gi|317052268|ref|YP_004113384.1| hypothetical protein Selin_2108 [Desulfurispirillum indicum S5] gi|316947352|gb|ADU66828.1| protein of unknown function DUF107 [Desulfurispirillum indicum S5] Length = 462 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 6/130 (4%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRD 63 L ++ ++L ++ ++ E +SP + I + G I + + ++R + + D Sbjct: 3 LYRLFFFSLILFAGLGLGLFSQLAAQPEASSPRIVVIDLEGPIGPAVGDFVKRSLQKAAD 62 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNI 120 + A ++ +++PGG + I +AI + + PVI+ V AASAG I AS++ Sbjct: 63 EQVDAAVLRMNTPGGLDSSMRDIIQAI--LDSPLPVISYVAPTGARAASAGTYILYASHV 120 Query: 121 IVAAETSLVG 130 A ++ +G Sbjct: 121 AAMAPSTNLG 130 >gi|326338731|gb|EGD62551.1| Prophage Clp protease-like protein [Escherichia coli O157:H7 str. 1125] Length = 629 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 49/236 (20%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + I+ + + + + + SPGG + G AI+ A++ +K I + MAAS I+ Sbjct: 34 DEINACGNVSEIHLRIHSPGGDIFEGLAIYNALKNHPAKK--IVHIEGMAASMASFIAMC 91 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + IV E ++ + + + V + V+ Sbjct: 92 GDHIVMPENAM------MMIHA------------PRGVTAGVSGD------------VRR 121 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQS 236 D++D + + + + W G E K G D EV + Sbjct: 122 FADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFAD------EVIAA 175 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + A+ +S R N P+ I S++ +Q ++ G+ ++ Sbjct: 176 ITAMARIESKRIGDFSNMPEK----------IKSMISQKTTSGEQERLNGIRELFG 221 >gi|188586087|ref|YP_001917632.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350774|gb|ACB85044.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius thermophilus JW/NM-WN-LF] Length = 280 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 88/235 (37%), Gaps = 55/235 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 +++ H+ + I GQIE + ++ ++ ++ ++V L+ Sbjct: 36 GGTNIPKAPNHIHSMVIVGQIEGHMTLPPQNKTTKYEHVLPQLVAAEQNPQVEGILVILN 95 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI + + KP ++ V S G I+ A++ A+T+ Sbjct: 96 TVGGDVEAGLAIAEMLDSIS--KPSVSLVLGGGHSIGVPIAVATDYSYIAQTA------T 147 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P ++ +GV ++ MQD V + V+ Sbjct: 148 MTIHP-IRLTGQLIGV------------------PQTYDYLEKMQDRV-------LSFVT 181 Query: 195 ESRNIPYDKTL-------VLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + I ++ L+ G + G +A + GLI+ VGG + L ++ Sbjct: 182 QHSGIHPEQLRRLMFNSGQLARDIGTVLVGEDAVREGLINEVGGIGQAVNRLESM 236 >gi|169829216|ref|YP_001699374.1| phage protein [Lysinibacillus sphaericus C3-41] gi|168993704|gb|ACA41244.1| phage protein [Lysinibacillus sphaericus C3-41] Length = 355 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 81/211 (38%), Gaps = 50/211 (23%) Query: 39 ARIAIRGQIE----------------DSQELIERIERISRDDSATALIVSLSSPGGSAYA 82 ARI IRG I + ++++I+R + L+V+++SPGGS YA Sbjct: 2 ARIDIRGAIVPDGEQWIYDWYGIPAVSPKRIMQQIDRAINNQE-KELVVNINSPGGSVYA 60 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 I+ I+K ++E+ + ASA +I+ AS +V A +G L + Sbjct: 61 ASEIWTHIKKYPGNS--VSEISGVCASAASIIALASKKVVIAP------VGALMIH---- 108 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + + + ++ M+ ++ + ++ E + Sbjct: 109 --------NASVIAEGDYR------------EMESMKQLLIQTNDAIMQTYKEKTKKSDE 148 Query: 203 KTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE 232 + + D W +A + G +D + EE Sbjct: 149 ELKQMMDAETWMNAQQAVENGFVDEIMFAEE 179 >gi|168756419|ref|ZP_02781426.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4401] gi|168770135|ref|ZP_02795142.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486] gi|189356545|gb|EDU74964.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4401] gi|189361013|gb|EDU79432.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486] Length = 629 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 49/236 (20%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + I+ + + + + + SPGG + G AI+ A++ +K I + MAAS I+ Sbjct: 34 DEINACGNVSEIHLRIHSPGGDIFEGLAIYNALKNHPAKK--IVHIEGMAASMASFIAMC 91 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + IV E ++ + + + V + V+ Sbjct: 92 GDHIVMPENAM------MMIHA------------PRGVTAGVSGD------------VRR 121 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQS 236 D++D + + + + W G E K G D EV + Sbjct: 122 FADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFAD------EVIAA 175 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + A+ +S R N P+ I S++ +Q ++ G+ ++ Sbjct: 176 ITAMARIESKRIGDFSNMPEK----------IKSMISQKTTSGEQERLNGIRELFG 221 >gi|257088339|ref|ZP_05582700.1| peptidase S14 [Enterococcus faecalis D6] gi|256996369|gb|EEU83671.1| peptidase S14 [Enterococcus faecalis D6] Length = 250 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 63/192 (32%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + GQI + ++ ++ + + V ++SPGG A I+ +++ Sbjct: 27 LYLNGQIAEVSWFDDDVTPQLFKDELMSGEGNITVWINSPGGDCVAAAQIYNMLKEYSGD 86 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A + +V + ++ + + + +V Sbjct: 87 --VTIKIDGLAASAASVIAMAGDKVVMSPVAM------MMIH------------NPSTVA 126 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 Q ++D + + K + D W Sbjct: 127 FGDRVDM------------QKAMAMLDEVKESIINAYEIKTGMSRTKLAHMMDAETWMDA 174 Query: 216 AEAKKVGLIDVV 227 A +G D V Sbjct: 175 RSAVDLGFADDV 186 >gi|78779795|ref|YP_397907.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9312] gi|123969045|ref|YP_001009903.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. AS9601] gi|126696838|ref|YP_001091724.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9301] gi|157413876|ref|YP_001484742.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9215] gi|254526963|ref|ZP_05139015.1| Clp protease [Prochlorococcus marinus str. MIT 9202] gi|115311346|sp|Q319H4|CLPP2_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|78713294|gb|ABB50471.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prochlorococcus marinus str. MIT 9312] gi|123199155|gb|ABM70796.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. AS9601] gi|126543881|gb|ABO18123.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9301] gi|157388451|gb|ABV51156.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9215] gi|221538387|gb|EEE40840.1| Clp protease [Prochlorococcus marinus str. MIT 9202] Length = 203 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 38/183 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + DD++ + + ++SPGGS AG AI+ I+ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKL--GVSIKSVKSSPMKAEPS 165 +L++ + VA S + + + + + I++ + +K + Sbjct: 102 MGAFLLAAGTKGKRVALPHSR------IMIHQPLGGTSQRQASDIEIEAKEILRIKDMLN 155 Query: 166 P-FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +++ ++ + ++ D Y + EAK GLI Sbjct: 156 MSMADMTGQSFEKIEKDTDRDY-------------------------FLSAEEAKNYGLI 190 Query: 225 DVV 227 D V Sbjct: 191 DRV 193 >gi|206900657|ref|YP_002250483.1| YqeZ [Dictyoglomus thermophilum H-6-12] gi|206739760|gb|ACI18818.1| YqeZ [Dictyoglomus thermophilum H-6-12] Length = 423 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 17/130 (13%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRD 63 +KKI +L L+ S + + +V I I+G IE +E I Sbjct: 1 MKKIFITIFLLFLIL---------SSIYAQNQNVYIIPIKGTIELGLASFVE--RSIREH 49 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 +A A I + + GG A I I + I + + A SAG LI+ + IV Sbjct: 50 PNAKAFIFEIDTFGGRVDAAIKIRDTI--LATPTLTIAFIKDRAWSAGALIALSCEKIVI 107 Query: 124 AETSLVGSIG 133 + + GSIG Sbjct: 108 SPS---GSIG 114 >gi|239636619|ref|ZP_04677621.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus warneri L37603] gi|239597974|gb|EEQ80469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus warneri L37603] Length = 196 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 39/198 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRYALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + R+++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQE 231 T EAK GL+D V E Sbjct: 176 TAEEAKAYGLVDEVMEPE 193 >gi|325914956|ref|ZP_08177288.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria ATCC 35937] gi|325538849|gb|EGD10513.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria ATCC 35937] Length = 728 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 38/198 (19%) Query: 31 VEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA--LIVSLSSPGGSAYAGEAI 86 +E + VA + I G I DS E + +E + + TA + V ++S GG G AI Sbjct: 19 IEARANDVAEVMIYGTIGDSLWSESVSALELAEQINQITASTIHVRINSGGGVVADGIAI 78 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + A+ + K + V AAS LI+ A N +V +SL L + Sbjct: 79 YNALSQHAAHK--VVFVDGQAASIASLIAMAGNEVVMYASSL------LMVHA------- 123 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 ++ + + + ++ A M++ + + + Sbjct: 124 -----PHTIAAGNASSFRQYATALDAHAGAMLEAY------------ATKTGKRSEVEQL 166 Query: 207 LSDGR-IW-TGAEAKKVG 222 L+DG W TGA+A + G Sbjct: 167 LTDGADHWYTGAQAVEFG 184 >gi|291087633|ref|ZP_06346979.2| translocation-enhancing protein TepA [Clostridium sp. M62/1] gi|291074513|gb|EFE11877.1| translocation-enhancing protein TepA [Clostridium sp. M62/1] Length = 264 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 85/230 (36%), Gaps = 55/230 (23%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 + +++ G+IE + ++ ++ I DD +++ +++ GG Sbjct: 62 NRRKNRIHLLSVIGEIEGHENLSSNTKTTKYEHILPKLAEIEDDDQVDGMLILINTVGGD 121 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 G A+ I + P ++ V + S G ++ AS+ T G + +P Sbjct: 122 VSCGLALAEMIASLSR--PTVSLVIGDSHSIGVPLAVASDYSFIVPT------GTMMIHP 173 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G+ I +V++ +M+QD + + VSE I Sbjct: 174 -----VRMTGMVIGAVQTYDYF--------------EMIQDRI-------LSFVSEHARI 207 Query: 200 PYDKTLVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 YD+ L G + G EA K GLID VGG E L L Sbjct: 208 AYDQLKGLMLNTKMLTKDLGTVLVGEEAVKEGLIDEVGGIHEALTKLNEL 257 >gi|295696208|ref|YP_003589446.1| peptidase S14 ClpP [Bacillus tusciae DSM 2912] gi|295411810|gb|ADG06302.1| peptidase S14 ClpP [Bacillus tusciae DSM 2912] Length = 257 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 81/235 (34%), Gaps = 55/235 (23%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I GQIE + +I ++ ++D +++ L++ GG AG AI Sbjct: 54 ITIIGQIEGHIILPPQNKTTKYEHVIPQLVAAEQNDKVKGVLIVLNTVGGDVEAGLAIAE 113 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + KP +T V S G I+ A AE++ + +P Sbjct: 114 MIATL--TKPTVTLVLGGGHSIGVPIAVAGQYSFIAESA------TMTIHP--------- 156 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL- 207 + + + + + ++ MQ+ V VR V + I + L Sbjct: 157 -IRLTGMVIGA---------PASWEYLERMQERV-------VRFVVDHSKISEAQFRELM 199 Query: 208 -SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 G G +A + GLID +GG L + + R+ P Sbjct: 200 MKTGELARDIGTTVVGKDAVRYGLIDEIGGIGRALGKLREMVDAAATRQPPAGKP 254 >gi|295091960|emb|CBK78067.1| Protease subunit of ATP-dependent Clp proteases [Clostridium cf. saccharolyticum K10] Length = 262 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 85/230 (36%), Gaps = 55/230 (23%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 + +++ G+IE + ++ ++ I DD +++ +++ GG Sbjct: 60 NRRKNRIHLLSVIGEIEGHENLSSNTKTTKYEHILPKLAEIEDDDQVDGMLILINTVGGD 119 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 G A+ I + P ++ V + S G ++ AS+ T G + +P Sbjct: 120 VSCGLALAEMIASLSR--PTVSLVIGDSHSIGVPLAVASDYSFIVPT------GTMMIHP 171 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G+ I +V++ +M+QD + + VSE I Sbjct: 172 -----VRMTGMVIGAVQTYDYF--------------EMIQDRI-------LSFVSEHARI 205 Query: 200 PYDKTLVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 YD+ L G + G EA K GLID VGG E L L Sbjct: 206 AYDQLKGLMLNTKMLTKDLGTVLVGEEAVKEGLIDEVGGIHEALTKLNEL 255 >gi|256026839|ref|ZP_05440673.1| putative Clp protease [Fusobacterium sp. D11] gi|289764832|ref|ZP_06524210.1| hypothetical protein PSAG_00434 [Fusobacterium sp. D11] gi|289716387|gb|EFD80399.1| hypothetical protein PSAG_00434 [Fusobacterium sp. D11] Length = 370 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 74/213 (34%), Gaps = 50/213 (23%) Query: 30 HVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGS 79 +++ S ++A I I G I S + ++++ + + + + ++SPGG Sbjct: 11 EIKNLSENIAEIRIYGTITKWAWEEYGEVSSANFAKELQKL---KNISHINLRVNSPGGD 67 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + AI+ ++ + + +AASA + + V+ Sbjct: 68 VFEASAIYNLLKDYAKVNNIEITGYIDGLAASAASFLVLCATK-------------VIMG 114 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV--NPKAVQMMQDVVDSSYHWFVRLVSE 195 + + +P + N + ++ +++D+ + + Sbjct: 115 -------------------TGALYMIHNPLTSAYGNAEKLKKQIELLDTVKEAILDIYCT 155 Query: 196 SRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVV 227 + ++ +G W +EA + G +D + Sbjct: 156 KSKLSREEISEKMNGEKWYRASEALEAGFVDEI 188 >gi|316936725|gb|ADU60357.1| capsid protein [Wolbachia phage WO] Length = 135 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 VGGQEEVWQ 235 V E Sbjct: 62 VTTFFEFIN 70 >gi|316936717|gb|ADU60353.1| capsid protein [Wolbachia phage WO] Length = 132 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 VGGQEEVWQ 235 V E Sbjct: 62 VTTFFEFIN 70 >gi|325661480|ref|ZP_08150105.1| hypothetical protein HMPREF0490_00839 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472196|gb|EGC75409.1| hypothetical protein HMPREF0490_00839 [Lachnospiraceae bacterium 4_1_37FAA] Length = 232 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 82/225 (36%), Gaps = 55/225 (24%) Query: 37 HVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + I G+IE + L+ ++ I ++ +++ L++ GG AG Sbjct: 36 RIQLLTIIGEIEGHEAVSGNTKATKYEHLLPKLAEIEDNEEIDGVLILLNTMGGDVEAGL 95 Query: 85 AIFRAIQKVKNRKPVITEV--------HEMAASAGYLISCASNIIVAAETSLVGS-IGVL 135 AI I + KP ++ V +A SA Y S ++ G IGVL Sbjct: 96 AIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTMIVHPVRSTGMFIGVL 153 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Y ++ D++ + + ++ Q+ V+ +LV Sbjct: 154 QSYKNMERTQDRI-------------------TRFLAEHSRISQERVEELMLDSTQLVK- 193 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L +G +A + GLID VGG + + L A+ Sbjct: 194 -------DVGTLLEGE-----DAVREGLIDAVGGISDALKKLQAM 226 >gi|153871745|ref|ZP_02000839.1| Peptidase S49 [Beggiatoa sp. PS] gi|152071790|gb|EDN69162.1| Peptidase S49 [Beggiatoa sp. PS] Length = 163 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 42/98 (42%), Gaps = 13/98 (13%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSP------HVARIAIRGQIED-----SQEL 53 + + ++ + L+ T++ W + +N H A I ++G I + ++ Sbjct: 41 VFFMLLFFIYIFLIYATILEPDWHRFIGENDETASADTHTALIEVQGIIASETEASADQI 100 Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 + + + +D+ +I+ ++SPG + + ++ Sbjct: 101 VSGLRKAFKDNKTKGVILRINSPG--VVQCKLVISMMK 136 >gi|315648078|ref|ZP_07901179.1| peptidase S14 ClpP [Paenibacillus vortex V453] gi|315276724|gb|EFU40067.1| peptidase S14 ClpP [Paenibacillus vortex V453] Length = 258 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 57/236 (24%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 +V + I GQIE + +I ++ ++ L++ L++ GG Sbjct: 49 NGGESNVFCMTIIGQIEGHLVLPPQNKTTKYEHMIPQLVAAEQNPRIEGLLIILNTVGGD 108 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLVGSIGVLFQY 138 AG AI I + KP +T V S G I+ A++ I+A ++ I + Sbjct: 109 VEAGLAIAEMIASLS--KPTVTVVIGGGHSIGVPIAVAADHSIIAESATMT--IHPIRM- 163 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + +GV + ++ MQ+ V VR V+ Sbjct: 164 ---SGLV--IGV------------------PQTFEYMEKMQERV-------VRFVTSHSG 193 Query: 199 IPYDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 I ++ L + G + +G +A K GL+D VGG + L ++ ++ Sbjct: 194 ITEERFKNLMFATGELNRDIGTAVSGVDAVKYGLMDEVGGIGQALSRLNSMIAERK 249 >gi|65321281|ref|ZP_00394240.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus anthracis str. A2012] gi|167633728|ref|ZP_02392052.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0442] gi|170688767|ref|ZP_02879971.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0465] gi|170705747|ref|ZP_02896210.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0389] gi|177654334|ref|ZP_02936263.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0174] gi|190566076|ref|ZP_03018995.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis Tsiankovskii-I] gi|227813139|ref|YP_002813148.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. CDC 684] gi|229601615|ref|YP_002868186.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0248] gi|167531134|gb|EDR93821.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0442] gi|170129287|gb|EDS98151.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0389] gi|170667283|gb|EDT18042.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0465] gi|172080824|gb|EDT65905.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0174] gi|190562995|gb|EDV16961.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis Tsiankovskii-I] gi|227002833|gb|ACP12576.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. CDC 684] gi|229266023|gb|ACQ47660.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A0248] Length = 240 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 43/207 (20%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 3 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IKTINLYINSPGGSVF 60 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + +I+ + + AS ++ S+ I+ S+ + + Sbjct: 61 ETMAIIAMLQRHHAK--IISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 109 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + ++ Q +V L + Sbjct: 110 ---------NAWTYASGN----ADQLRKAADDIERINQSMVQHY------LTRAGDKLDE 150 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + EA GL D + Sbjct: 151 DTLKQLLDAETWLSAEEAMGYGLCDEI 177 >gi|254474347|ref|ZP_05087733.1| peptidase S14, ClpP [Ruegeria sp. R11] gi|214028590|gb|EEB69425.1| peptidase S14, ClpP [Ruegeria sp. R11] Length = 377 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 71/209 (33%), Gaps = 37/209 (17%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 +++E +E + D T V ++S GG G AI+ A++ V V +AASA Sbjct: 29 DVLEALEELGDDADIT---VRVNSGGGYTDQGIAIYNALKAHGGE--VTVVVDGVAASAA 83 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 LIS A + I+ + + + +PS F+ Sbjct: 84 SLISMAGDQIIMRRGA------TMMLH------------------------DPSGFASGM 113 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 + + +D + +E D +W TG EA K G Sbjct: 114 ADEIAIAVRALDRIGAVMASIYAEQSGDDPDDLRKEMKAELWLTGEEAVKRGFATASEDV 173 Query: 231 EEVWQSLYALGV-DQSIRKIKDWNPPKNY 258 + + + G S +K+ +N+ Sbjct: 174 KAAKAAAFDYGAYAHSPKKLVAMASKRNW 202 >gi|154484793|ref|ZP_02027241.1| hypothetical protein EUBVEN_02511 [Eubacterium ventriosum ATCC 27560] gi|149734641|gb|EDM50558.1| hypothetical protein EUBVEN_02511 [Eubacterium ventriosum ATCC 27560] Length = 217 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 84/227 (37%), Gaps = 49/227 (21%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 +N ++ ++I G+IE + ++ + +I D L++ L++ GG Sbjct: 15 NNNHKNIFLLSIIGEIEGHENVASGTKATKYEHILPMLAKIEDDQDIDGLLIILNTVGGD 74 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 G AI I + KP ++ V + S G ++ +++ T G + +P Sbjct: 75 VECGLAIAEMIASLS--KPTVSLVLGGSHSIGVPLAVSADYSFIVPT------GTMVIHP 126 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV---RLVSES 196 V + + + + +Q+ ++ FV + E+ Sbjct: 127 ----------VRMNGMFIGV---------PQTYEYFKKIQERIND----FVINHCHIREN 163 Query: 197 RNIPYDKTLVLSD---GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 R + G I G + K G+ID +GG ++ + LY + Sbjct: 164 RFSELMNETEILTKDVGSILVGKQTVKEGIIDEIGGLKDAMKKLYEM 210 >gi|157325221|ref|YP_001468643.1| gp4 [Listeria phage B025] gi|255520628|ref|ZP_05387865.1| Clp protease domain protein [Listeria monocytogenes FSL J1-175] gi|66733227|gb|AAY53044.1| gp4 [Listeria phage B025] Length = 249 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 91/258 (35%), Gaps = 53/258 (20%) Query: 40 RIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 RI ++G + + + I +D A +V ++S GG YAG I+ Sbjct: 3 RIDVKGVVVSNDDKWIYDFFEMDSVSPNDISEALKDTFEPAEVV-INSGGGDVYAGSEIY 61 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 +++ V ++ +AASA +I+ A N + A T+ L + Sbjct: 62 STLKEYAGD--VTVKIVGLAASAASVIAMAGNTVKIAPTA------QLMIH--------- 104 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 ++ SV S + ++ + S+Y + L Sbjct: 105 ---NVSSVVSGDFRDFQH-----ESDVLENYNKSIASAYML-------KSGKAESEVLEF 149 Query: 208 SDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGV----DQSIRKIKDWNPPKNYWF-- 260 + W T +AK+ G +D + E+ + ++ + I KI++ P W Sbjct: 150 MNAETWFTAEQAKEHGFVDEIMFAEKAPKLTASITSTMLPESVINKIRNSKPVGTGWHEA 209 Query: 261 -CDLKNLSISSLLEDTIP 277 L + +++ + + Sbjct: 210 KGLLTKDDVHNMINEALE 227 >gi|238028274|ref|YP_002912505.1| hypothetical protein bglu_1g27310 [Burkholderia glumae BGR1] gi|237877468|gb|ACR29801.1| Hypothetical protein bglu_1g27310 [Burkholderia glumae BGR1] Length = 366 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 80/209 (38%), Gaps = 39/209 (18%) Query: 24 YFSWSSHVEDNSPHVARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGS 79 ++ + + + I I G I D+++ R++ + SA +++V+++S GG Sbjct: 7 WWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVG--SSAASIVVAVNSMGGD 64 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + I+ +++ + V +AASA L+ + IV ++ L + Sbjct: 65 VFDAFTIYNLLRRYPGK--TTGRVDGIAASAASLLLMGCSQIVMPSNAM------LMIH- 115 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + ++ + ++ + D++ S+ + +E Sbjct: 116 -----------NPHTLAAGD------------EGELRRLADLLGSTSANMLTAYAERSGQ 152 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 DK L D W T A+A ++G D + Sbjct: 153 TEDKVRELMDVETWLTAAQAVELGFCDAI 181 >gi|330719338|ref|ZP_08313938.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc fallax KCTC 3537] Length = 202 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I ++G++ED + ++ ++ + DS + + ++SPGGS AG AI ++ +K Sbjct: 27 IILVQGEVEDQMATSIVAQLLFLEAQDSDKEISMYINSPGGSVTAGLAIVDTMRFIKA-- 84 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T V +AAS G +I+ + G F P + + + Sbjct: 85 PVTTIVMGLAASMGTIIASSGTK------------GKRFMLPNAEYLIHQP--------- 123 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + ++ + + +++SE+ P ++ ++ W + Sbjct: 124 -----MGGAAGGTQQTDMAIIAQQLTKTRERLNKILSENSGQPLEQIRNDTERDYWMSAE 178 Query: 217 EAKKVGLIDVV 227 E GLID + Sbjct: 179 ETLDYGLIDGI 189 >gi|251771980|gb|EES52552.1| protein of unknown function DUF114 [Leptospirillum ferrodiazotrophum] Length = 272 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +EDS+E++ I+ D + + + + SPGG A I A+ K PV V Sbjct: 67 VEDSEEILRAIK--LTDPNTP-IDLIVHSPGGLVLAAMQIAHALANRKA--PVTVFVPHF 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV E +++G Sbjct: 122 AMSGGTLIALAASQIVMDENAVLG 145 >gi|28210969|ref|NP_781913.1| ATP-dependent Clp protease proteolytic subunit [Clostridium tetani E88] gi|28203408|gb|AAO35850.1| ATP-dependent clp protease proteolytic subunit [Clostridium tetani E88] Length = 255 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 82/224 (36%), Gaps = 49/224 (21%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 + + + I GQ+E + +I ++ I DD+ ++V L++ GG A Sbjct: 57 NDRIYILPIIGQVEGHAAVPPQNKSTKYEHVIPQLVNIQMDDNIEGVLVILNTVGGDVEA 116 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G AI I + KP ++ V S G ++ ASN + T+ + +P Sbjct: 117 GLAIAEMIGSL--GKPTVSLVIGGGHSIGVPLATASNYSFISPTA------TMIIHPIRM 168 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 L LGV P+ + + D F+ S+ Sbjct: 169 NGL-ILGV---------------------PQTFEYFDKMQDRIIE-FIVRTSKMDKETIK 205 Query: 203 KTLVLSD------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ +D G I G EA GLID VGG +E L L Sbjct: 206 DMMIKTDNLLNDMGTILIGKEAVDCGLIDEVGGIKEALNKLEEL 249 >gi|303244706|ref|ZP_07331037.1| protein of unknown function DUF114 [Methanothermococcus okinawensis IH1] gi|302484920|gb|EFL47853.1| protein of unknown function DUF114 [Methanothermococcus okinawensis IH1] Length = 279 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I D + L +PGG A E I A+++ K + VI + Sbjct: 67 IEDSEEVLRAIRMTPEDMPID---LILHTPGGLVLASEQIAMALKEHKAKTTVI--IPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LIS A + I+ + +++G + + QYP Sbjct: 122 AMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYP 155 >gi|222530657|ref|YP_002574539.1| hypothetical protein Athe_2712 [Caldicellulosiruptor bescii DSM 6725] gi|222457504|gb|ACM61766.1| protein of unknown function DUF114 [Caldicellulosiruptor bescii DSM 6725] Length = 269 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS+E+I I D S +I+ +PGG A I RAI++ K + V V Sbjct: 67 INDSEEVIRAIN--MTDPSIPLDIILH--TPGGLVLAATQIARAIKRHKGK--VTVHVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK 142 A S LI+ A++ IV +E +++G + + ++P V Sbjct: 121 YAMSGCTLIALAADEIVMSEDAILGPVDPQIGEFPAVS 158 >gi|299755201|ref|XP_001828495.2| ATP-dependent Clp protease proteolytic subunit [Coprinopsis cinerea okayama7#130] gi|298411115|gb|EAU93328.2| ATP-dependent Clp protease proteolytic subunit [Coprinopsis cinerea okayama7#130] Length = 254 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 74/199 (37%), Gaps = 42/199 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I D+ ++ ++ + +DS + + ++SPGGS AG AI+ +Q V Sbjct: 72 VIMLHGPIRDTDSTLVVAQLLFLEAEDSTKPIHLYINSPGGSVTAGLAIYDTMQYVSA-- 129 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSI-------GVLFQYPYVKPFLDKL 148 P+ T +AAS L++ + + SI G Q + ++ Sbjct: 130 PIHTYGLGLAASMGSLLLAAGAKGRRHCLPNA---SIMIHQPSGGASGQATDIAIHAKEI 186 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + I+ + + + + E ++ + ++ Y+ Sbjct: 187 -LRIRQLLTGIYQRHCAKEGETEAAGLKRFETALERDYYM-------------------- 225 Query: 209 DGRIWTGAEAKKVGLIDVV 227 T EA + G++D + Sbjct: 226 -----TAQEALEFGIVDGI 239 >gi|312984199|ref|ZP_07791545.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus crispatus CTV-05] gi|310894418|gb|EFQ43494.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus crispatus CTV-05] Length = 236 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 43/243 (17%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 ++ + + + + ++SPGG AG ++ A++K V +V A SA I+ Sbjct: 31 QLNEALSNANGQDITLEINSPGGYIDAGSEMYTALKKYPGN--VTAQVVGQACSAASWIA 88 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A++ + + T+ V GV Sbjct: 89 LAADKVEMSPTAQ-------MMIHRVSG-----GVEGNV-----------------DDFA 119 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE-- 232 MQ +DS +V L S+ + + + W +A G D + + + Sbjct: 120 SAMQS-LDSMDQAYVDLYSKRTGLDKQEVYRMMCETTWMNAKQAVDKGFADSIMFENDQA 178 Query: 233 -VWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289 + Y + V D +IRKIK K + + I + EDT Q K Sbjct: 179 PAVVNAYGVPVLSDNAIRKIKALIHDKK---SNADSKPIENKQEDTDK--GQVKKDLSLL 233 Query: 290 VWN 292 +W Sbjct: 234 LWQ 236 >gi|154686799|ref|YP_001421960.1| YqeZ [Bacillus amyloliquefaciens FZB42] gi|154352650|gb|ABS74729.1| YqeZ [Bacillus amyloliquefaciens FZB42] Length = 438 Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 55/127 (43%), Gaps = 3/127 (2%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRD 63 + + KT + L + + + + P V I + +E + R + +++ Sbjct: 1 MFRKKTGIAVALLGLFVLSLLGVQLNAKADHPSVYVIPVEKNVEQGLASFLSRSFKEAKE 60 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 A+ +I+ +++PGG+ + I I + PV V++ A SAG I+ ++ I Sbjct: 61 SGASHIILDINTPGGAVQSALDIADII--GRADVPVTAYVNKRALSAGAYIALQADEIYM 118 Query: 124 AETSLVG 130 A +G Sbjct: 119 APGGKMG 125 >gi|313901748|ref|ZP_07835175.1| protein of unknown function DUF114 [Thermaerobacter subterraneus DSM 13965] gi|313467984|gb|EFR63471.1| protein of unknown function DUF114 [Thermaerobacter subterraneus DSM 13965] Length = 280 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 27/175 (15%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 ++DS++++ I + + + +PGG A E I AI++ + R V V Sbjct: 72 TVDDSEQVLRAIRYTPPNMPID---LIVHTPGGLVLAAEQIAEAIRRHRGR--VTVMVPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMK--A 162 A S G LI+ A++ I E +++G + L YP + P K Sbjct: 127 YAMSGGTLIALAADAIWMDENAVLGPVDPQLGGYPAASILAA-------IRQKGPDKVDD 179 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI---WT 214 + ++ KA+ ++ V +P + +++ WT Sbjct: 180 KTLMLGDLAEKAIAQVRQTVQRLLQE---------RLPAEDARRIAEALTEGRWT 225 >gi|150399941|ref|YP_001323708.1| hypothetical protein Mevan_1198 [Methanococcus vannielii SB] gi|150012644|gb|ABR55096.1| protein of unknown function DUF114 [Methanococcus vannielii SB] Length = 283 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I D + L +PGG A E I A+++ K + VI + Sbjct: 67 IEDSEEILRAIRMTPGDMPID---LILHTPGGLVLASEQIATALKEHKAKTTVI--IPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ +++ I+ + +++G + + QYP Sbjct: 122 AMSGGSLIALSADEIIMDKNAVMGPVDPQVGQYP 155 >gi|110639225|ref|YP_679434.1| serine protease, ClpP class [Cytophaga hutchinsonii ATCC 33406] gi|110281906|gb|ABG60092.1| serine protease, ClpP class [Cytophaga hutchinsonii ATCC 33406] Length = 407 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Query: 59 RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS 118 + + DSA +I+ + + GG+ + I A+ +K KPV +++ AASAG LIS A Sbjct: 10 QAATRDSADYIILDMDTYGGALLDADKIRMAL--LKYPKPVYVYINKNAASAGALISIAC 67 Query: 119 NIIVAAETSLVG 130 + I S++G Sbjct: 68 DSIYMDAGSIIG 79 >gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus carnosus subsp. carnosus TM300] gi|254763800|sp|B9DJL4|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit [Staphylococcus carnosus subsp. carnosus TM300] Length = 194 Score = 66.0 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 39/198 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D+ + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + I+ Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA-TEIEIA 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 + +K + ++ +E ++ +D R Sbjct: 140 ATHILK------------TRAKLNKIL-----------AERTGQSIEQIEKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQE 231 T EAK+ GLID V E Sbjct: 176 TADEAKEYGLIDEVMQPE 193 >gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus pseudintermedius HKU10-03] gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus pseudintermedius HKU10-03] Length = 195 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 39/200 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D+ + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + +++SE P +K +D R Sbjct: 134 -----------------TEIEIAAKHILRTRERLNKILSELTGQPIEKIEKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEEV 233 T EAK+ GLID V E+ Sbjct: 176 TAQEAKEYGLIDEVMEPEKA 195 >gi|282900572|ref|ZP_06308514.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] gi|281194372|gb|EFA69327.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] Length = 194 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++ + + DD + + ++SPGGS AG AI+ IQ +K+ Sbjct: 32 IIFLTEEVDDGIANAIVAYLLYLDSDDQTKPIYLYINSPGGSVTAGMAIYDTIQYIKSE- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ + +A S + + Sbjct: 91 -VVTICVGLAASMGSFLLAAGAKGKRLALPHSR------IMIH------------QPSGG 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 E+ + + ++ ++ Y V D+ + Sbjct: 132 TRGQASDI-----EIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDF------FMSA 180 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 181 QEAKEYGLIDRV 192 >gi|315230791|ref|YP_004071227.1| membrane-bound ClpP-class protease [Thermococcus barophilus MP] gi|315183819|gb|ADT84004.1| membrane-bound ClpP-class protease [Thermococcus barophilus MP] Length = 449 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 10/127 (7%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSS 75 V L V F + + V I+GQI + I R +A A+I+ L + Sbjct: 4 VLLIVALFILLTPALAQAKTVYVAQIKGQITSYTYDQFDRYISEAERA-NANAIIIELDT 62 Query: 76 PGGSAYAGEAIFRAIQKVKNRK-PVITEV---HEMAASAGYLISCASNIIVAAETSLVGS 131 PGG A + I IQ+++ K PVI V MAASAG I+ S++I A + +G+ Sbjct: 63 PGGRGDAMQNI---IQRIQTAKVPVIIYVYPSGAMAASAGTYIALGSHLIAMAPGTGIGA 119 Query: 132 IGVLFQY 138 + Y Sbjct: 120 CRPILGY 126 >gi|148888425|gb|ABR15759.1| putative capsid protein [Wolbachia phage WO] Length = 136 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|163782276|ref|ZP_02177274.1| hypothetical protein HG1285_05800 [Hydrogenivirga sp. 128-5-R1-1] gi|159882309|gb|EDP75815.1| hypothetical protein HG1285_05800 [Hydrogenivirga sp. 128-5-R1-1] Length = 290 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 25/167 (14%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I D + + +PGG A A I A+ K K PV V Sbjct: 75 IEDSERVLRAIRMTPDDMPIDFV---IHTPGGLALAATQIANALAKHKA--PVRVIVPHY 129 Query: 107 AASAGYLISCASNIIVAAETSLVGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ +++ I+ +++G IG + +K K I Sbjct: 130 AMSGGTLIALSADEIIMDPNAVLGPVDPQIGQMPAASILKVLEKKEPKDID--------D 181 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + ++V+ KA++ M++ + + S+ + +K +++ Sbjct: 182 QTLILADVSEKAIRQMKEYLTNLL--------TSKGMEKEKAERIAE 220 >gi|72162593|ref|YP_290250.1| ClpP1 peptidase [Thermobifida fusca YX] gi|124013822|sp|Q47MU2|CLPP2_THEFY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|71916325|gb|AAZ56227.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Thermobifida fusca YX] Length = 203 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI GQ D + ++ + +S +D + + ++SPGGS AG AI+ +Q + N Sbjct: 30 RIVFLGQQVDDEIANRIVGELLLLSAEDRERDITLYINSPGGSVTAGMAIYDVMQYIPND 89 Query: 97 KPVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T +AAS G ++ CA A + + + Sbjct: 90 --VRTVGIGLAASMGQMLLCAGTRGKRYALPHTR------IMMH---------------- 125 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW 213 +PS ++++ D + F+ +S P ++ +D R + Sbjct: 126 --------QPSGGIGGTASDIRILADQLLYVKKMFLERISLHTGQPVEQIEKDADRDRWF 177 Query: 214 TGAEAKKVGLIDVV 227 T EA + G ID V Sbjct: 178 TAQEALEYGFIDEV 191 >gi|194333703|ref|YP_002015563.1| hypothetical protein Paes_0871 [Prosthecochloris aestuarii DSM 271] gi|194311521|gb|ACF45916.1| protein of unknown function DUF107 [Prosthecochloris aestuarii DSM 271] Length = 444 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 46/257 (17%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERIS 61 FV+KKI + ++ L+V H ++ + I+++G I S + +R ++ Sbjct: 2 FVIKKISVFIFTVFVLFLSVTVTHKDVHGDNGQSVLYTISLQGSINPGSADFFDRAVSLA 61 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCAS 118 DSA A++V L +PGG + + R I + + PVI V AASAG L++ AS Sbjct: 62 IADSAHAVLVELDTPGGLVTSLRQMVRRI--MASSVPVIVYVAPRGAQAASAGALLTLAS 119 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 ++ + + +G+ + +K GV M Sbjct: 120 HVAAMSPGTEIGAAHPVGLGGGES---EKSGV--------------------------MS 150 Query: 179 QDVVDSSYHWFVRLVSESRNIPY-----DKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEV 233 Q V+ F R ++E R ++ T EA + G+IDVV Sbjct: 151 QKAVNDL-AAFARSLAEERGRSPVWAEKAVRESIAS----TANEAFEAGVIDVVADDRTT 205 Query: 234 W-QSLYALGVDQSIRKI 249 ++L V + R + Sbjct: 206 LFKALEGRVVQTADRSV 222 >gi|83766223|dbj|BAE56366.1| unnamed protein product [Aspergillus oryzae] Length = 267 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 84/201 (41%), Gaps = 33/201 (16%) Query: 32 EDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 D SP I + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ Sbjct: 74 TDQSPQERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDT 133 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDK 147 + + + PV T AAS G L+ C + S SI + Sbjct: 134 MTYIAS--PVSTICVGQAASMGSLLLCGGHPGKRYCLPHS---SI---MIHQ-------- 177 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 S + + ++ K + +++ ++ Y R ++ + + D+ L Sbjct: 178 --------PSGGYFGQATDI-AIHAKEILRVREQLNKIY---KRHLTGKKELSLDEIEKL 225 Query: 208 SDGRIWTGAE-AKKVGLIDVV 227 + + GA+ A ++G++D + Sbjct: 226 MERDYFMGAQEALEMGIVDEI 246 >gi|220931198|ref|YP_002508106.1| peptidase S14 ClpP [Halothermothrix orenii H 168] gi|219992508|gb|ACL69111.1| peptidase S14 ClpP [Halothermothrix orenii H 168] Length = 234 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 51/211 (24%) Query: 31 VEDNSPHVARIAIRGQI------EDSQELIE------RIERISRDDSATALIVSLSSPGG 78 ++ + A I + G I ED +++I ++ +I+ D +IV L+S GG Sbjct: 10 FNESDNNAAEIYLHGPIRNPLPDEDEEDVITLKEVRNKLNKITADK----IIVHLNSTGG 65 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + AI + K +I +AAS G +I A + I S+ + + Sbjct: 66 DLFQSVAIHNLFKDHKAE--IIMINDGIAASGGSIILMAGDKIKFYPNSI------MMIH 117 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW-FVRLVSESR 197 ++ K +++ + + +Y F Sbjct: 118 A------------AHTITYGDAKYHREVARKLD-----KIDKSLKENYSQRFTGA----- 155 Query: 198 NIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + L W T EAK+ G D + Sbjct: 156 ---EKELEKLIQEETWLTAKEAKEKGFCDEI 183 >gi|33861870|ref|NP_893431.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|67460515|sp|Q7V0F1|CLPP2_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|33640238|emb|CAE19773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 201 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 38/183 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + DD+ + + ++SPGGS AG AI+ I+ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSDDNTKPIYLYINSPGGSVTAGLAIYDTIKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKL--GVSIKSVKSSPMKAEPS 165 +L+ + VA S + + + + + I++ + +K + Sbjct: 102 MGAFLLGAGTKGKRVALPHSR------IMIHQPLGGTSQRQASDIEIEAREILRIKDMLN 155 Query: 166 -PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 S++ ++ + ++ D Y + EAK GLI Sbjct: 156 HSMSDMTGQSFEKIEKDTDRDY-------------------------FLSAEEAKNYGLI 190 Query: 225 DVV 227 D V Sbjct: 191 DRV 193 >gi|220935297|ref|YP_002514196.1| hypothetical protein Tgr7_2129 [Thioalkalivibrio sp. HL-EbGR7] gi|219996607|gb|ACL73209.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 496 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 108/262 (41%), Gaps = 34/262 (12%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRDDSAT 67 R + +L+ + ++++ ED + I G I S ++ +++ RD+ A Sbjct: 14 FRLGVWALLLILGAVLAFAATGEDRQRSALLLDIDGAIGPATSDYVVRGLKQA-RDEGAE 72 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVA- 123 +I+ + +PGG A + + I + + PV T V AASAG I ++ I A Sbjct: 73 LVILRMDTPGGLDTAMREMIKEI--LASPVPVATYVAPAGSRAASAGTYI-LYASHIAAM 129 Query: 124 AETSLVGS-----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS------------P 166 A + +GS IG + P +P D + ++ K + + P Sbjct: 130 APATNLGSATPVAIGGMPGMPDEQPQRDDRSRDREDKETKETKDKEAEAGDAAEERPAEP 189 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLID 225 +P ++++D V +++ ++E + + + T +EA + +ID Sbjct: 190 RRGTSPMERKVLEDAV-----AYIKGLAERHGRNAEWAEQAVREAVNLTYSEALALNVID 244 Query: 226 VVG-GQEEVWQSLYALGVDQSI 246 VV E++ + ++ V + Sbjct: 245 VVAESVEDLLKQIHGRTVKMDV 266 >gi|237755699|ref|ZP_04584308.1| periplasmic serine protease [Sulfurihydrogenibium yellowstonense SS-5] gi|237692149|gb|EEP61148.1| periplasmic serine protease [Sulfurihydrogenibium yellowstonense SS-5] Length = 283 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 13/142 (9%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+ ++ I +D + + +PGG A A I RA+ + V V Sbjct: 72 TIEDSEAVLRAIRMTPKDKPIDFI---IHTPGGIALAATQIARALVAHPAK--VRVIVPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ A++ IV +++G + L P V I+ +K + Sbjct: 127 YAMSGGTLIALAADEIVMDPFAVLGPVDPQLGMEPAASL------VKIEQLKEPKDIDDQ 180 Query: 165 SPFS-EVNPKAVQMMQDVVDSS 185 + +++ KA++ M+D V Sbjct: 181 TLVKIDMSKKALKQMKDTVKEI 202 >gi|153816437|ref|ZP_01969105.1| hypothetical protein RUMTOR_02690 [Ruminococcus torques ATCC 27756] gi|317500190|ref|ZP_07958422.1| translocation-enhancing protein TepA [Lachnospiraceae bacterium 8_1_57FAA] gi|331087582|ref|ZP_08336512.1| hypothetical protein HMPREF1025_00095 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846225|gb|EDK23143.1| hypothetical protein RUMTOR_02690 [Ruminococcus torques ATCC 27756] gi|316898405|gb|EFV20444.1| translocation-enhancing protein TepA [Lachnospiraceae bacterium 8_1_57FAA] gi|330400453|gb|EGG80086.1| hypothetical protein HMPREF1025_00095 [Lachnospiraceae bacterium 3_1_46FAA] Length = 235 Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 55/236 (23%) Query: 38 VARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + I G+IE L+ R+ +I DD +++ L++ GG AG A Sbjct: 32 IQLLTIIGEIEGHDSVSGNTKATKYEHLLPRLAQIEEDDETDGVLILLNTLGGDVEAGLA 91 Query: 86 IFRAIQKVKNRKPVITEV--------HEMAASAGYLISCASNIIVAAETSLVGS-IGVLF 136 I I + KP ++ V +A SA Y + ++ G IGV+ Sbjct: 92 IAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPTGTMIVHPVRSTGMFIGVMQ 149 Query: 137 QYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 Y ++ D++ + A S + ++++ ++DSS V+ V Sbjct: 150 SYRNMEKTQDRI---------TKFIASHSNIT-----QDRLLELMLDSS--QLVKDV--- 190 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW 252 G + G +A K G+ID VGG +E + L++L + ++ K+ Sbjct: 191 -------------GTMLEGEQAVKEGMIDEVGGIKEAFAKLHSLIDKEKEKQEKNL 233 >gi|311030070|ref|ZP_07708160.1| protein export-enhancing factor [Bacillus sp. m3-13] Length = 252 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 55/232 (23%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + I GQIE + +I +I I ++ + L+V L++ GG AG AI Sbjct: 50 LTIVGQIEGHVQLPPQNKTTKYEHVIPQIVAIEQNPNIEGLLVILNTVGGDVEAGLAISE 109 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--------LVG-SIGVLFQYP 139 + + KP ++ V S G I+ + + AET+ L G IGV + Sbjct: 110 MLASLS--KPTVSLVLGGGHSIGVPIAVSCDYSFIAETATMTIHPVRLTGLVIGVPQTFE 167 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 Y+ D++ ++ + S P+ F L+ N+ Sbjct: 168 YLDKMQDRV-INFVTKNSG------------IPEEK-------------FKELMLSKGNL 201 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 D + GA+A + GLID VGG E + L + ++ K ++ Sbjct: 202 TRDIGTNV------VGADAVEYGLIDQVGGVGEAIRKLNEMVEAKNPNKTQE 247 >gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus xylosus] Length = 194 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + D+ + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + ++++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 + EAK+ GL+D V E Sbjct: 176 SAEEAKEYGLVDQVMVPES 194 >gi|46241459|gb|AAS82929.1| capsid protein [Wolbachia phage WO] Length = 136 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|304439217|ref|ZP_07399135.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372349|gb|EFM25937.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 235 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 37/192 (19%) Query: 40 RIAIRGQIEDS----QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + I G I + ++ ++ + + + V ++SPGG A I+ + + K Sbjct: 23 VLYIDGVIAEDSWFDDDVTPKLFASELKNKSGDITVWINSPGGDCIAASRIYTMLLEHKG 82 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V ++ +AASA +I+ A ++ + TSL + + + +V Sbjct: 83 N--VTIKIDGLAASAASVIAMAGTEVLMSPTSL------IMIH------------NPLTV 122 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K +Q D++ + + ++ L DG W Sbjct: 123 AIGDSK------------EMQKAIDMLKEVKESIINAYEIKTGLSREEISNLMDGETWFD 170 Query: 216 A-EAKKVGLIDV 226 +A ++G D Sbjct: 171 KNKAIEMGFCDG 182 >gi|296503172|ref|YP_003664872.1| phage protein [Bacillus thuringiensis BMB171] gi|296324224|gb|ADH07152.1| phage protein [Bacillus thuringiensis BMB171] Length = 260 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 74/211 (35%), Gaps = 53/211 (25%) Query: 38 VARIAIRGQIEDSQE----------------LIERIERISRDDSATALIVSLSSPGGSAY 81 +I ++G I + E + + + + DD LIVS++SPGG + Sbjct: 2 TVKIDVKGPIISNDEAWIYDWFEMDAASPGKISKELIDANGDD----LIVSINSPGGYVH 57 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G I+ A++ V ++ +AASA +I+ A + + + T+ + + Sbjct: 58 EGSEIYTALKSYPGH--VEVQIVGLAASAASVIAMAGDKVRISPTA------QIMIH--- 106 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + G K++ M + ++ V S Sbjct: 107 NASMWNGGDHRDMEKAAEM---------LKTTDRAIVNAYVIKS------------GKSE 145 Query: 202 DKTLVLSDGRIWTG-AEAKKVGLIDVVGGQE 231 ++ L + W G +A + +D + + Sbjct: 146 EELLHMMAEETWMGPQQALENNFVDEIMFMD 176 >gi|148241694|ref|YP_001226851.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. RCC307] gi|147850004|emb|CAK27498.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp. RCC307] Length = 200 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 79/193 (40%), Gaps = 36/193 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D + L+ ++ + DDS+ + + ++SPGGS AG AI+ IQ +K+ Sbjct: 32 ILFLGGEVNDGVANALVAQMLYLDSDDSSKPIYLYINSPGGSVTAGLAIYDTIQYIKSD- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ + VA S + + + + I+ Sbjct: 91 -VVTICVGLAASMGAFLLAAGTKGKRVALPHSR------IMIHQPLGGTAQRQASDIEI- 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +A +++ + +++ +K +D + + Sbjct: 143 -----------------EAREIL-----RMKDQLNKQLADMSGQTIEKITKDTDRDYFLS 180 Query: 215 GAEAKKVGLIDVV 227 +AK GLID V Sbjct: 181 ADDAKAYGLIDRV 193 >gi|311031628|ref|ZP_07709718.1| serine peptidase [Bacillus sp. m3-13] Length = 444 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 53/132 (40%), Gaps = 4/132 (3%) Query: 6 KKIKTRYVMLSLVTLTVVYFSW-SSHVEDNSPHVARIAIRGQIEDSQ-ELIERIERISRD 63 K ++ YV ++ L + +H V I + G +E I R + + D Sbjct: 3 KVLRISYVSAFVLALILSALPLLPTHTSSAEKLVHVIPVNGTVEKGLLSFINRSIQTAED 62 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 D A ++ + +PGG A I + P + V+ A SAG ++ ++ I Sbjct: 63 DGADLIVFDIHTPGGLVDAATEIANKFEGAS--IPTVAFVNSQALSAGAYLALYADQIYM 120 Query: 124 AETSLVGSIGVL 135 + +G+ V+ Sbjct: 121 TPNASMGAAAVI 132 >gi|186972970|pdb|3BPP|A Chain A, 1510-N Membrane Protease K138a Mutant Specific For A Stomatin Homolog From Pyrococcus Horikoshii Length = 230 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 6/105 (5%) Query: 38 VARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 V I+GQI + + +R I+ D+A A+I+ L +PGG A A I + IQ +++ Sbjct: 10 VYVAQIKGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRADAMMNIVQRIQ--QSK 67 Query: 97 KPVITEV---HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 PVI V AASAG I+ S++I A + +G+ + Y Sbjct: 68 IPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY 112 >gi|148258948|ref|YP_001243533.1| hypothetical protein BBta_7800 [Bradyrhizobium sp. BTAi1] gi|146411121|gb|ABQ39627.1| hypothetical protein BBta_7800 [Bradyrhizobium sp. BTAi1] Length = 276 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 + DS++++ I DD +++ +PGG A I RAI+ K + V V Sbjct: 67 VNDSEDVLRAIH--MTDDDVPLDIVLH--TPGGLVLAALQIARAIRAHKAK--VTVFVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV S++G I Sbjct: 121 YAMSGGTLIALAADEIVMCRHSVLGPI 147 >gi|114707244|ref|ZP_01440142.1| ATP-dependent Clp protease proteolytic subunit [Fulvimarina pelagi HTCC2506] gi|114537440|gb|EAU40566.1| ATP-dependent Clp protease proteolytic subunit [Fulvimarina pelagi HTCC2506] Length = 217 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G IEDS + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 VIFITGPIEDSMATLVCAQLLFLEAENPKKEIALYINSPGGVVTSGMAIYDTMQFIRPA- 95 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ CA A + + + Sbjct: 96 -VTTLCIGQAASMGSLLLCAGEKDMRFATPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + ++ ++ +Y + Y+ D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKLKRRLNETY-------VKHTGQDYETIERTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVV 227 E+ + GLID V Sbjct: 185 AEESLEFGLIDKV 197 >gi|303239203|ref|ZP_07325732.1| peptidase S49 [Acetivibrio cellulolyticus CD2] gi|302593248|gb|EFL62967.1| peptidase S49 [Acetivibrio cellulolyticus CD2] Length = 269 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 88/235 (37%), Gaps = 55/235 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + V + ++ + + GQIE + +I ++ I L++ L+ Sbjct: 49 GKTSVSNEKGNIHCLTVIGQIEGHIVLPPQNKTTKYEHVIPQLVAIEESKEIDGLLLILN 108 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI I + KP ++ V S G ++ ++ A ++ Sbjct: 109 TVGGDVEAGLAIAEMIASMS--KPTVSLVLGGGHSIGVPMAVSTKYSFIAPSA------T 160 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P ++ +GV + MQ+ V V+ V+ Sbjct: 161 MTIHP-IRLNGMVIGV------------------PQTFEYFDKMQERV-------VQFVA 194 Query: 195 ESRNIPYD-------KTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ NI + KT L++ G I G EA GLID GG E + LY L Sbjct: 195 KNSNISKETFRSLMLKTGELANDVGTILFGEEAVTQGLIDGTGGLYEALKKLYEL 249 >gi|253796888|gb|ACT35699.1| capsid protein [Wolbachia phage WO] gi|253796910|gb|ACT35710.1| capsid protein [Wolbachia phage WO] Length = 136 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|83858431|ref|ZP_00951953.1| ATP-dependent Clp protease, proteolytic subunit [Oceanicaulis alexandrii HTCC2633] gi|83853254|gb|EAP91106.1| ATP-dependent Clp protease, proteolytic subunit [Oceanicaulis alexandrii HTCC2633] Length = 207 Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G IED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q + Sbjct: 37 IVFVTGPIEDHMASLMVAQLLFLESENPNKEIAMYINSPGGSVSAGLAIYDTMQYISC-- 94 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T MAAS G L+ A + A + + + F G + Sbjct: 95 PVATACVGMAASMGSLLLTAGDKGMRFATPNAR------IMLHQPSGGFR---GTTADIE 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 + + + ++ ++ Y + P +K D + Sbjct: 146 RHG--------------EDILKIKRRMNEIY-------VKHTGQPLEKVEKTLDRDFYMD 184 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 185 AMEAKEFGLIDHV 197 >gi|331084957|ref|ZP_08334044.1| hypothetical protein HMPREF0987_00347 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408657|gb|EGG88122.1| hypothetical protein HMPREF0987_00347 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 229 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 55/225 (24%) Query: 37 HVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + I G+IE + L+ ++ I ++ +++ L++ GG AG Sbjct: 33 RIQLLTIIGEIEGHEAVSGNTKATKYEHLLPKLAEIEDNEEIDGVLILLNTMGGDVEAGL 92 Query: 85 AIFRAIQKVKNRKPVITEV--------HEMAASAGYLISCASNIIVAAETSLVGS-IGVL 135 AI I + KP ++ V +A SA Y S ++ G IGVL Sbjct: 93 AIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTMIVHPVRSTGMFIGVL 150 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Y ++ D++ + + ++ QD V+ +LV Sbjct: 151 QSYKNMERTQDRI-------------------TRFLAEHSRISQDRVEELMLDSTQLVK- 190 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L +G +A + GLID VGG + + L A+ Sbjct: 191 -------DVGTLLEGE-----DAVREGLIDAVGGISDALKKLQAM 223 >gi|299143348|ref|ZP_07036428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517833|gb|EFI41572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 194 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D + + ++SPGGS AG AI+ I+ +K Sbjct: 29 IIFLSGEINDVTADLVVAQLLFLEAEDQNKDIQIYINSPGGSVSAGFAIYDTIKYIKCD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V +AAS +L++ + A + I + + + + + + Sbjct: 88 -VSTMVIGLAASMGAFLLAAGTKGKRFALPNA---DIMIHQPLGGAQGQASDIKIHAEKI 143 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 + + + ++ SE P +K +D + + Sbjct: 144 L----------------EIRERINKIL-----------SEETGQPLEKVERDTDRDYYLS 176 Query: 215 GAEAKKVGLIDVV 227 EA + GLID V Sbjct: 177 AKEAVEYGLIDKV 189 >gi|209546440|ref|YP_002278330.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539297|gb|ACI59230.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 203 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 35/198 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IVFLNGEVNDTVSALVCAQLLFLEAENPKKPIYLYINSPGGVVTSGLAMYDTMRYIRA-- 90 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEPGERAALPNA---SILIHQPSGGFQGQATDMQIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERAMDRD--------RFMTS 181 Query: 216 AEAKKVGLIDVVGGQEEV 233 EA + GLID + EV Sbjct: 182 QEALEWGLIDKIMQLREV 199 >gi|253796892|gb|ACT35701.1| capsid protein [Wolbachia phage WO] gi|253796894|gb|ACT35702.1| capsid protein [Wolbachia phage WO] gi|253796896|gb|ACT35703.1| capsid protein [Wolbachia phage WO] gi|253796914|gb|ACT35712.1| capsid protein [Wolbachia phage WO] Length = 101 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|158320276|ref|YP_001512783.1| hypothetical protein Clos_1241 [Alkaliphilus oremlandii OhILAs] gi|158140475|gb|ABW18787.1| protein of unknown function DUF107 [Alkaliphilus oremlandii OhILAs] Length = 430 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 20/180 (11%) Query: 28 SSHVEDNSPHVARIAIRGQIEDSQEL--IERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ + + +V I IRG+I + L + + D +ATA+I + + GG + E Sbjct: 20 AASGDQGAGNVYVIPIRGEITPAMHLYVKHNLSIVESDKNATAVIFEIDTYGGRIDSSEQ 79 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I + I + P I+ V+ A SAG L++ +S+ I A +S +GS + P + L Sbjct: 80 IGKLI--LNTNIPTISFVNTKAESAGVLLTISSDTIAMAPSSTIGSAETV---PNTEKVL 134 Query: 146 -----------DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 K G V + K+ P V+ + + VD+ F+ ++ Sbjct: 135 STWVGILRSTAQKTGRDETIVSAMADKSVVIP--GVSERGRLLNLTNVDAILLDFIDFIA 192 >gi|325291111|ref|YP_004267292.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophobotulus glycolicus DSM 8271] gi|324966512|gb|ADY57291.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophobotulus glycolicus DSM 8271] Length = 202 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 34/192 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ++D + ++ ++ + +D + + ++SPGGS AG AI+ +Q V+ Sbjct: 30 IIFLGGQVDDYMANLIVAQLLFLDAEDPEKDIFLYINSPGGSISAGMAIYDTMQHVRAD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS +L++ + G P + + + Sbjct: 89 -VHTICVGLAASMGAFLLASGAK-------------GKRTALPNSEILIHQ--------- 125 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P+ S +++ + RL++E P ++ +D R T Sbjct: 126 --PLLGGLSG----QATEIEIHAKHILRVKERMNRLLAEMTGQPVERIEQDTDRDRYLTA 179 Query: 216 AEAKKVGLIDVV 227 EAK+ GL+D + Sbjct: 180 QEAKEYGLVDQI 191 >gi|316936723|gb|ADU60356.1| capsid protein [Wolbachia phage WO] Length = 135 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 VGGQEEVWQ 235 V E + Sbjct: 62 VTTFFEFFN 70 >gi|329850562|ref|ZP_08265407.1| clp protease family protein [Asticcacaulis biprosthecum C19] gi|328840877|gb|EGF90448.1| clp protease family protein [Asticcacaulis biprosthecum C19] Length = 208 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ED + + ++ + ++ + + ++SPGG + AI+ +Q +K+ Sbjct: 38 IIFLTGPFEDGMATSICAQLLFLESENPKKEISMYINSPGGQVTSALAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAASAG LI A G P K + + S Sbjct: 96 PVTTVCMGMAASAGSLILQAGEN------------GQRISLPNSKIMVHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGA 216 + S E+ + ++ + +++ Y + PY+ D R T Sbjct: 136 GGARGMASDI-EIQAEDMRKTKKLLNEIY-------VKHTGQPYEVIERTLDRDRYMTAE 187 Query: 217 EAKKVGLIDVV 227 EAK+ GLID V Sbjct: 188 EAKEFGLIDHV 198 >gi|227431752|ref|ZP_03913779.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352435|gb|EEJ42634.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 235 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 95/256 (37%), Gaps = 49/256 (19%) Query: 35 SPHVARIAIRGQIE-----DSQELIERIERISRD-DSATALIVSLSSPGGSAYAGEAIFR 88 + +VA+I I G I D + ++ + + +S++S GGS + G AI+ Sbjct: 10 TNNVAQIDIFGDIVSEKWFDEETSATSFRDALKELGDVSTINLSINSGGGSVFDGIAIYN 69 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++ K V + +AAS +I+ A + I S+ + + Sbjct: 70 MLKSHKAT--VNVYIEGLAASIASVIAMAGDTITMRSGSM------IMVH---------- 111 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 P S+ N + ++ D ++ + V + SE I D + Sbjct: 112 --------------MPWTLSQGNAEEMRKTADTLEKTGDSIVDIYSERTGISSDDIRNIM 157 Query: 209 DGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 + W + EA + G + +E V S+ + N PKN L + Sbjct: 158 NDETWLSAEEAVEQGWATKLDKKEAVMNSV------PKEILGRFSNVPKN----VLARVE 207 Query: 268 ISSLLEDTIPLMKQTK 283 +L +D + L+++ K Sbjct: 208 KKTLSQDRLDLIEREK 223 >gi|316936721|gb|ADU60355.1| capsid protein [Wolbachia phage WO] Length = 137 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + ++++ +Q VD Y FV+L++ +R + +K ++ ++ G A ++GL D Sbjct: 3 MEPMTSESLESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGERAIEIGLADG 61 >gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus haemolyticus JCSC1435] gi|124013829|sp|Q4L4J5|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435] Length = 195 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + ++++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 T EAK+ GLID V E+ Sbjct: 176 TADEAKEYGLIDNVMQPED 194 >gi|156037438|ref|XP_001586446.1| hypothetical protein SS1G_12432 [Sclerotinia sclerotiorum 1980] gi|154697841|gb|EDN97579.1| hypothetical protein SS1G_12432 [Sclerotinia sclerotiorum 1980 UF-70] Length = 198 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+++ S ++ ++ + D A+ + ++SPGGS AG AI+ + +K+ Sbjct: 23 IICLNGEVDSSLSAAVVAQLLYLESDAPEKAITLYINSPGGSVTAGLAIYDTMTYIKS-- 80 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C S SI + + + + Sbjct: 81 PVSTVCVGQAASMGSLLLCGGEPGKRFCLPHS---SIMIHQPSGGYSGQATDIAIHATEI 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-----LSDG 210 ++ ++ Y R++ + +L + Sbjct: 138 L--------------------RVRKSLNEIYK---------RHLTKEHSLEEIERMMERD 168 Query: 211 RIWTGAEAKKVGLIDVVGGQEE 232 + + EA +G++D + + E Sbjct: 169 KFLSAQEALDMGIVDEILDRRE 190 >gi|134300444|ref|YP_001113940.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1] gi|134053144|gb|ABO51115.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1] Length = 258 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 35/188 (18%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 +++ + + ++S GGS + G AI+ +++ +K + A S +I+ A Sbjct: 48 NELAKYPDVKEIKIFINSYGGSVFEGTAIYSQLRRHPAQK--TVYIDGFACSVASVIAMA 105 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + ++ + + + + + KA + + Sbjct: 106 GDRVIMPKNT-------MMMIHNAWNIVAGN-------ATQLRKAADDLDTIMAGNRQSY 151 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV----GGQEE 232 +Q + I +K + L D W T + + G D + E Sbjct: 152 LQKS--------------NGKITEEKLIELLDAETWLTAEQCIEYGFADELLEKDADLTE 197 Query: 233 VWQSLYAL 240 Q L + Sbjct: 198 AKQLLQKM 205 >gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] Length = 194 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++ + + DD + + ++SPGGS AG AI+ IQ +K+ Sbjct: 32 IIFLTEEVDDGIANAIVAYLLYLDSDDQTKPIYLYINSPGGSVTAGMAIYDTIQYIKSE- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 VIT +AAS +L++ + +A S + + Sbjct: 91 -VITICVGLAASMGSFLLAAGAKGKRLALPHSR------IMIH------------QPSGG 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 E+ + + ++ ++ Y V D+ + Sbjct: 132 TRGQASDI-----EIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDF------FMSA 180 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 181 QEAKEYGLIDRV 192 >gi|294851554|ref|ZP_06792227.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|294820143|gb|EFG37142.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] Length = 116 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPG 77 ++S S + N PH+A++ I G I +++EL++R+++I+ DD+ +I+ L SPG Sbjct: 39 GFAFYSLRS-AKFNQPHIAKVRIEGTIFENEELLKRLDKIAGDDAVKGVILLLDSPG 94 >gi|313680083|ref|YP_004057822.1| hypothetical protein Ocepr_1192 [Oceanithermus profundus DSM 14977] gi|313152798|gb|ADR36649.1| protein of unknown function DUF107 [Oceanithermus profundus DSM 14977] Length = 426 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 84/237 (35%), Gaps = 57/237 (24%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLS 74 L+ +++ + + + I G I++ + + + + R R + A+ +++ + Sbjct: 6 LILSFLIFLAGWAQAAS-----YVVQIEGTIDNPLAAYVEDALVRAER-EGASGVVLWID 59 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 +PGG A I A+ ++ P + V A SAG LI+ ++ + S +G Sbjct: 60 TPGGRVDAAMRISDAV--LQTPLPTLAVVKN-AFSAGALIALSAEQVAMLPGSEIG---- 112 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + + +P +E + + + F R V+ Sbjct: 113 -----------------------AALPIVVTPVTEPTAADRKF----ISALKGKF-RAVA 144 Query: 195 ESRNIPYDKTLVLSDGRI-------------WTGAEAKKVGLID-VVGGQEEVWQSL 237 E+R P + + D I T A+A ++G+ D + + Sbjct: 145 EARGRPVELAEAMVDPEIEVEGLAGKGEPLTLTAAKAVELGVADFEAASLRDALERA 201 >gi|331090230|ref|ZP_08339118.1| hypothetical protein HMPREF1025_02701 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402176|gb|EGG81748.1| hypothetical protein HMPREF1025_02701 [Lachnospiraceae bacterium 3_1_46FAA] Length = 238 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 70/192 (36%), Gaps = 37/192 (19%) Query: 41 IAIRGQIEDSQELIERIE-RISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + G+I D + + ++ +D+ + + V ++SPGG +A I+ + K Sbjct: 17 LFLNGEISDETWYGDEVTPKLFKDELLSGEGDITVWINSPGGDVFAAAQIYNMLMDYKGN 76 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A ++ + ++ + + + ++ Sbjct: 77 --VTVKIDGLAASAASVIAMAGTKVLMSPVAM------MMIH------------NPATIA 116 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 + + + +++D + + K L D W Sbjct: 117 IGD-----------TAEMKKAI-EMLDEVKESIMNAYEIKTGLNRTKISHLMDAESWFNA 164 Query: 216 AEAKKVGLIDVV 227 +A ++G D + Sbjct: 165 KKAVELGFADEI 176 >gi|317132778|ref|YP_004092092.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3] gi|315470757|gb|ADU27361.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3] Length = 248 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 70/192 (36%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + G+I D E+ ++ + + + + ++SPGG +A I+ + Sbjct: 23 LYLDGEISDETWYGDEVTPQVFKDELNSGKGNITLWINSPGGDVFAAAQIYNMLMDYPYD 82 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A + + ++ L + + ++ Sbjct: 83 --VTVKIDALAASAASVIAMAGTKVCMSPVAM------LMVH------------NPATIA 122 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + ++ +++ + ++Y + +K L D W Sbjct: 123 IGDSEEMQKAIDMLSE-----VKESIMNAYEI-------KSGLSRNKISKLMDAETWMNA 170 Query: 216 AEAKKVGLIDVV 227 EAKK+G D + Sbjct: 171 KEAKKLGFADEI 182 >gi|257463897|ref|ZP_05628283.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. D12] gi|317061426|ref|ZP_07925911.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. D12] gi|313687102|gb|EFS23937.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. D12] Length = 195 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 75/182 (41%), Gaps = 34/182 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI--TEVHEMA 107 + L+ ++ + +D +I+ ++SPGGS AG AI+ + V KP I + + A Sbjct: 40 AASLVAQLLYLEAEDPTKDIILYINSPGGSVSAGLAIYDTMNYV---KPDIQTVCIGQAA 96 Query: 108 ASAGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + +L++ + A E S + + P+ S Sbjct: 97 SMGAFLLAAGTKGKRFALENSR------IMIHQ-------------------PLGGTGSG 131 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLID 225 + + VQ++ + ++ +++++ ++ L ++ + T EA K GLID Sbjct: 132 YHQATD--VQIIAKELQATKEKLAGIIAKNTGKSKEEVLEDTERDNYLTAEEAVKYGLID 189 Query: 226 VV 227 +V Sbjct: 190 MV 191 >gi|221195242|ref|ZP_03568298.1| ATP-dependent Clp protease proteolytic subunit [Atopobium rimae ATCC 49626] gi|221185145|gb|EEE17536.1| ATP-dependent Clp protease proteolytic subunit [Atopobium rimae ATCC 49626] Length = 260 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 52/221 (23%) Query: 31 VEDNSPHVARIAIRGQIEDSQ-----------------ELIERIERISRDDSATALIVSL 73 V + P VA++ I G I D ++++ + +S D + V + Sbjct: 11 VTQDEPDVAKLTIYGDITDGSFFVLLFDKEDPSTTGGLDIVKALSELSDD--VKTVEVHI 68 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG 133 +S GG G AI+ A++ V+T A S +I A + + SL+ Sbjct: 69 NSYGGEVMQGVAIYNALRDCGRE--VVTVCDGFACSIASVIFMAGSRRIMRPASLL---- 122 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + P+V + + +E++ M Sbjct: 123 -MLHNPWVSARGNAQDLR-------KQADTLDTIAELSK--TAYM--------------- 157 Query: 194 SESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEV 233 ++ + + D W + +A + GL V G +E Sbjct: 158 -TGTSLDRETLDAVMDAETWVSPEQALEWGLATEVSGSKEA 197 >gi|222087754|ref|YP_002546291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium radiobacter K84] gi|221725202|gb|ACM28358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium radiobacter K84] Length = 214 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++S + + ++SPGG +G A++ ++ ++ Sbjct: 40 IIFLNGEVNDTVSALVCAQLLFLEAENSRKPISLYINSPGGVVTSGLAMYDTMRYIRA-- 97 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + A S SI + + + + + Sbjct: 98 PVHTLCMGTARSMGSFLLMAGQAGERSALPNS---SIHIHQPLGGFQGQASDMLIHAAEM 154 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ + +Y F R + D T Sbjct: 155 ERTKHR------------MTRLYAEHCGRTYEEF------ERAMDRD--------HFMTA 188 Query: 216 AEAKKVGLIDVV 227 +A + GLID + Sbjct: 189 EQALEWGLIDRI 200 >gi|188996501|ref|YP_001930752.1| protein of unknown function DUF114 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931568|gb|ACD66198.1| protein of unknown function DUF114 [Sulfurihydrogenibium sp. YO3AOP1] Length = 283 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+ ++ I +D + + +PGG A A I RA+ + V V Sbjct: 72 TIEDSEAVLRAIRMTPKDKPIDFI---IHTPGGIALAATQIARALVAHPAK--VRVIVPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV +++G Sbjct: 127 YAMSGGTLIALAADEIVMDPFAVLG 151 >gi|206890313|ref|YP_002249833.1| periplasmic serine protease [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742251|gb|ACI21308.1| periplasmic serine protease [Thermodesulfovibrio yellowstonii DSM 11347] Length = 280 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 39/192 (20%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E++ I D + + +PGG A A I RA+ + K + V V Sbjct: 69 IHDSEEVLRAIHLTDDDTPID---LVVHTPGGLAIAATQIARALSRQKAK--VTVFVPHY 123 Query: 107 AASAGYLISCASNIIVAAETSLVGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 A S G LI+ +++ IV E +++G IG + K Sbjct: 124 AMSGGTLIALSADEIVMCEHAVLGPLDPQIGQQPAVSVLSVLQKK--------------- 168 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLSDGRI---WT--- 214 P S+++ + ++ D + + + + E S N +K +++ + WT Sbjct: 169 ---PLSDIDDNTL-ILADQAEKAIRQMKQTIIEILSHNQSSEKAEEIAEKLVSGKWTHDY 224 Query: 215 ---GAEAKKVGL 223 EAK++GL Sbjct: 225 PISAEEAKELGL 236 >gi|170755513|ref|YP_001782120.1| putative Clp protease [Clostridium botulinum B1 str. Okra] gi|169120725|gb|ACA44561.1| putative Clp protease [Clostridium botulinum B1 str. Okra] Length = 252 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 77/218 (35%), Gaps = 37/218 (16%) Query: 27 WSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRD-DSATALIVSLSSPGGSA 80 W + ++ I G I +D+ + + L + ++SPGGS Sbjct: 7 WEVKNSSENENIGETYIYGDIVSYKWDDTDTTAKSFKEDLDSLGDIDTLNIYINSPGGSV 66 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + G AI+ I++ K + + V +AAS +I+ A + I + S+ + + Sbjct: 67 FQGTAIYNIIKRHKAK--INIHVDGVAASIASVIAMAGDTIFMPKNSM------MMIH-- 116 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + + + ++ + ++++ + Sbjct: 117 ----------NPWTFAWGN----ANELRKQADDLDKIRESLIEAYLS------KAGDKLS 156 Query: 201 YDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + + + D W T E GL D + ++E+ S+ Sbjct: 157 RETLIEIMDNETWLTAQECYDYGLCDELVEEKEIAASI 194 >gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W1] gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus epidermidis M23864:W1] Length = 195 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 39/198 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + R+++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQE 231 T EAK GLID V E Sbjct: 176 TAEEAKSYGLIDEVMEPE 193 >gi|90410782|ref|ZP_01218797.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium profundum 3TCK] gi|90328413|gb|EAS44711.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium profundum 3TCK] Length = 207 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 75/203 (36%), Gaps = 47/203 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + +++ +E P + +D R Sbjct: 153 AQEILT----------------IKQRLNNLL-----------AEHTGQPLEIVEGDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V Q + Sbjct: 185 DNFMSADQAVEYGLVDSVLTQRD 207 >gi|220931715|ref|YP_002508623.1| peptidase S14 ClpP [Halothermothrix orenii H 168] gi|219993025|gb|ACL69628.1| peptidase S14 ClpP [Halothermothrix orenii H 168] Length = 264 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 47/217 (21%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I GQIE + +I ++ + + L+V L++ GG AG AI Sbjct: 68 IPIVGQIEGHLVLPPKNKTTKYEHIIPQLVAVEENPKIKGLLVILNTVGGDIEAGLAISE 127 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASN--IIVAAETSLVGSI---GVLFQYPYVKP 143 I + KP ++ V S G I+ +++ IVA + + I G++ P Sbjct: 128 MINSM--TKPTVSVVLGGGHSIGVPIAVSTDYSYIVATASMTIHPIRLTGMVIGVPQTYE 185 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +LDK+ + S + + P F ++ M Q VR V Sbjct: 186 YLDKMQDRVISFVTQHSRILPDHFRQL------MFQT------GELVRDV---------- 223 Query: 204 TLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G + G EA G+ID VGG + L L Sbjct: 224 ------GTVLVGEEAVNHGIIDEVGGLNKAVNKLREL 254 >gi|332981667|ref|YP_004463108.1| hypothetical protein Mahau_1088 [Mahella australiensis 50-1 BON] gi|332699345|gb|AEE96286.1| protein of unknown function DUF107 [Mahella australiensis 50-1 BON] Length = 432 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 5/125 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDS 65 +K ++ + + + S V I +G++ + + IE+ + + Sbjct: 1 MKKLLIITAYMVILSAVISTPLSALAADNIVYVIPAKGEVTPAMAGFVSSSIEQAGK-EG 59 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A+A+I+ + +PGG + I AI + PVI+ V++ A SAG LI+ A++ +V A Sbjct: 60 ASAIILDIDTPGGYVQSAMDIKDAIMD--SPVPVISYVNKRALSAGVLIAIAADHLVMAP 117 Query: 126 TSLVG 130 S +G Sbjct: 118 ASHMG 122 >gi|327401777|ref|YP_004342616.1| hypothetical protein Arcve_1908 [Archaeoglobus veneficus SNP6] gi|327317285|gb|AEA47901.1| protein of unknown function DUF107 [Archaeoglobus veneficus SNP6] Length = 427 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 113/279 (40%), Gaps = 57/279 (20%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQEL-IERIERISRDDSATA 68 R + +SLV ++ + VE + V + I+G I + + + +++ + +A A Sbjct: 2 ARMLPVSLVMFLLLSLLSAEAVE--AAKVVEVDIKGDINEGTAIQVSNAFKLAEEVNADA 59 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAE 125 +++ + +PGG + ++I I +++ PVIT V +ASAG I + +I + Sbjct: 60 VLIVIDTPGGLVTSMKSIVTEI--LQSDIPVITYVHPPGAFSASAGSFILISGHIAAMSN 117 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + VG +P + + + + + + + Sbjct: 118 GTSVG--------------------------------AATPITPIGAAENKTINYLANYA 145 Query: 186 YHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQE-EVWQSLYALGVD 243 + ++E R P D +++G T EA + G++DV+ + E++ + VD Sbjct: 146 -----KSIAEVRGRPVDIAERFVTEGLSLTAREAYEKGVVDVIADSKGELFSKINGKEVD 200 Query: 244 QSIRK----------IKDWNPPKNYWFCDLKNLSISSLL 272 + RK +K P K F L N +S+L Sbjct: 201 VNGRKIVLHFETVEIVKAEKPLKASIFEILSNPQTASIL 239 >gi|315499702|ref|YP_004088505.1| endopeptidase clp [Asticcacaulis excentricus CB 48] gi|315417714|gb|ADU14354.1| Endopeptidase Clp [Asticcacaulis excentricus CB 48] Length = 209 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ED + + ++ + ++ + + ++SPGG + AI+ +Q +K+ Sbjct: 38 IIFLTGPFEDGMATSICAQLLFLESENPKKEISMYINSPGGQVTSALAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAASAG LI A G P K + + S Sbjct: 96 PVTTVCMGMAASAGSLILQAGEA------------GQRISLPNSKIMVHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGA 216 + S E+ + ++ + +++ Y + PYD D R T A Sbjct: 136 GGARGMASDI-EIQAEDIRKTKKLLNEIY-------VKHTGQPYDVIERTLDRDRYMTAA 187 Query: 217 EAKKVGLIDVV 227 EAK+ GLID V Sbjct: 188 EAKEFGLIDHV 198 >gi|332283232|ref|YP_004418917.1| peptidase S14 [Pusillimonas sp. T7-7] gi|330430960|gb|AEC22293.1| peptidase S14 [Pusillimonas sp. T7-7] Length = 240 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 43/195 (22%) Query: 39 ARIAIRGQIE------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 A I + G I D E + + I D + + + SPGG +A A+ AI + Sbjct: 29 ATIYLHGVIGGWWGDIDETEFAKTLAGIDADT----IHLRIDSPGGDVFAARAMMTAISQ 84 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K + VI V +AASA I A + + + + + + Sbjct: 85 HKAK--VIAHVDGLAASAATGICMACDEVEITQGAG------FMIH------------NA 124 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++ + + + + Y ++ ++ D Sbjct: 125 WTIAIGNKADMGK-----TSELLGKIDAGLSDDY-------AKRTGQKSEQITSWMDEET 172 Query: 213 W-TGAEAKKVGLIDV 226 W T EA + G D Sbjct: 173 WFTADEAVEHGFADR 187 >gi|109157467|pdb|2DEO|A Chain A, 1510-N Membrane Protease Specific For A Stomatin Homolog From Pyrococcus Horikoshii gi|109157468|pdb|2DEO|B Chain B, 1510-N Membrane Protease Specific For A Stomatin Homolog From Pyrococcus Horikoshii Length = 230 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 6/105 (5%) Query: 38 VARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 V I+GQI + + +R I+ D+A A+I+ L +PGG A A I + IQ +++ Sbjct: 10 VYVAQIKGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRADAXXNIVQRIQ--QSK 67 Query: 97 KPVITEV---HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 PVI V AASAG I+ S++I A + +G+ + Y Sbjct: 68 IPVIIYVYPPGASAASAGTYIALGSHLIAXAPGTSIGACRPILGY 112 >gi|110633522|ref|YP_673730.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium sp. BNC1] gi|116243101|sp|Q11J60|CLPP1_MESSB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|110284506|gb|ABG62565.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chelativorans sp. BNC1] Length = 210 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 77/202 (38%), Gaps = 37/202 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFITGPVEDGMATLVCAQLLFLEAENPKKEIALYINSPGGVVTSGMAIYDTMQFIQP-- 94 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ CA ++ A + V + Sbjct: 95 PVSTLCIGQAASMGSLLLCAGHKDMRFATPNARV------MVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + ++ ++ Y + YD D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKLKRRLNEIY-------VKHTGQDYDTIERTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQS 236 EA+ GL+D V + E ++ Sbjct: 185 ADEAQAFGLVDRVISEREAIEA 206 >gi|226313002|ref|YP_002772896.1| translocation-enhancing protein [Brevibacillus brevis NBRC 100599] gi|226095950|dbj|BAH44392.1| translocation-enhancing protein [Brevibacillus brevis NBRC 100599] Length = 274 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 43/204 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + LI ++ +++ ++V L++ GG AG AI + + KPV+T V S Sbjct: 98 EHLIPQLVAAEQNNKIEGVLVILNTVGGDVEAGLAIAEMVASLS--KPVVTLVLGGGHSI 155 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ A + AET+ + +P + + + Sbjct: 156 GVPIAVAGSYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 190 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---------GRIWTGAEAKKV 221 + + MQD V V ++ + +K L G G +A K Sbjct: 191 TFEYLDKMQDRV-------VSFIARHSKVSEEKFRELMTRTGELTRDIGTNVIGVDAVKY 243 Query: 222 GLIDVVGGQEEVWQSLYALGVDQS 245 GLID VGG + L L Q Sbjct: 244 GLIDEVGGLGSALKKLNELIKAQK 267 >gi|317501080|ref|ZP_07959286.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae bacterium 8_1_57FAA] gi|316897467|gb|EFV19532.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae bacterium 8_1_57FAA] Length = 242 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 43/195 (22%) Query: 41 IAIRGQIED----SQELIERI---ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 + + G+I D E+ ++ E + D + T + ++SPGG +A I+ + Sbjct: 23 LYLDGEISDETWFGDEVTPKLFSDELHAGDGNIT---LWINSPGGDVFAAAQIYNMLMDY 79 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V ++ +AASA +I+ A + + ++ + + + Sbjct: 80 PHD--VTVKIDALAASAASVIAMAGTKVCMSPVAM------MMVH------------NPA 119 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ + +Q D+++ + + K L D W Sbjct: 120 TIAIGDT------------EEMQKAIDMLNEVKESIMNAYEIKSGLSRHKISQLMDAETW 167 Query: 214 -TGAEAKKVGLIDVV 227 EA K+G D + Sbjct: 168 MNAKEAVKLGFADEI 182 >gi|254721484|ref|ZP_05183273.1| prophage LambdaBa02, Clp protease family protein [Bacillus anthracis str. A1055] Length = 251 Score = 64.8 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 43/207 (20%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 14 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IETINLYINSPGGSVF 71 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + +I+ + + AS ++ S+ I+ S+ + + Sbjct: 72 ETMAIIAMLQRHHAK--IISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 120 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + ++ Q +V L + Sbjct: 121 ---------NAWTYASGN----ADQLRKAADDIERINQSMVQHY------LTRAGDKLDE 161 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + EA GL D + Sbjct: 162 DTLKQLLDAETWLSAEEAMGYGLCDEI 188 >gi|323487027|ref|ZP_08092339.1| translocation-enhancing protein TepA [Clostridium symbiosum WAL-14163] gi|323692069|ref|ZP_08106316.1| peptidase S14 ClpP [Clostridium symbiosum WAL-14673] gi|323399675|gb|EGA92061.1| translocation-enhancing protein TepA [Clostridium symbiosum WAL-14163] gi|323503869|gb|EGB19684.1| peptidase S14 ClpP [Clostridium symbiosum WAL-14673] Length = 269 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 49/229 (21%) Query: 35 SPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYA 82 H+ I+I G+IE + ++ ++ I ++V +++ GG Sbjct: 70 GAHIHLISIIGEIEGHENLSGNTKTTKYEHILPKLAEIEDSREVDGVLVMINTVGGDVSC 129 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G A+ I + KP ++ V + S G ++ A++ T G + +P Sbjct: 130 GLALAEMIASLS--KPTVSLVIGDSHSIGVPLAVATDYSFIVPT------GTMMIHP--- 178 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE------S 196 + G I +V++ +M+QD + FV S+ Sbjct: 179 --VRMSGTVIGAVQTYDYF--------------EMIQDRI----LNFVSGHSQIAYDQLR 218 Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 R + + L G + G++A K GLI VGG E Q L + +++ Sbjct: 219 RLMLNTEMLTKDLGTVLVGSDAVKEGLICEVGGIREALQKLNRMVLERK 267 >gi|316936707|gb|ADU60348.1| capsid protein [Wolbachia phage WO] Length = 140 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 V 227 V Sbjct: 62 V 62 >gi|260436469|ref|ZP_05790439.1| Clp protease [Synechococcus sp. WH 8109] gi|260414343|gb|EEX07639.1| Clp protease [Synechococcus sp. WH 8109] Length = 200 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSE--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + VA S + + + + I+ Sbjct: 102 MGAFLLAAGTKGKRVALPHSR------IMIHQPLGGTSRRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A +++ R +++ ++K +D + + EAK+ GLID Sbjct: 143 -----EAREIL-----RMKEMLNRSLADMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|242822497|ref|XP_002487898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces stipitatus ATCC 10500] gi|218712819|gb|EED12244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces stipitatus ATCC 10500] Length = 262 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 80/193 (41%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++ S ++ ++ + D + + ++SPGGS AG AI+ + +++ Sbjct: 79 IICLNGEVDETTSASIVAQLLFLEADSPEKPIHLYINSPGGSVTAGLAIYDTMTYIQS-- 136 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + Sbjct: 137 PVNTICVGQAASMGSLLLCGGHAGKRYCLPHS---SI---MIHQ---------------- 174 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + S ++ K + ++ ++ Y R ++ + + D+ L + + G Sbjct: 175 PSGGYFGQASDI-AIHAKEILRVRTQLNKIYQ---RHLTGKKQLSLDEIEKLMERDYFMG 230 Query: 216 AE-AKKVGLIDVV 227 A+ A ++G++D + Sbjct: 231 AQEALEMGIVDEI 243 >gi|326941533|gb|AEA17429.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar chinensis CT-43] Length = 258 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 75/228 (32%), Gaps = 53/228 (23%) Query: 38 VARIAIRGQIEDSQE----------------LIERIERISRDDSATALIVSLSSPGGSAY 81 +I ++G I + E + ++++ + +D LIVS++SPGG Sbjct: 2 TVKIDVKGPIISNDEAWIYDWFEMDATSPGKITKQLDNANSED----LIVSINSPGGYVD 57 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G I+ A++ V ++ +AASA +I+ A + + + T+ + + Sbjct: 58 EGSEIYTALKNYPGH--VEVQIVGLAASAASVIAMAGDKVRISPTAKI----------MI 105 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 G + + ++ V S Sbjct: 106 HNAAKWHG--------GDHRDMEKAAEMLKITDRAIVNAYVIKS------------GKSE 145 Query: 202 DKTLVLSDGRIWTG-AEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 ++ L + W G +A + D + E + ++ + + Sbjct: 146 EELLNMMAEETWMGPQQALENNFADEIMFMENPVKMTASMATAAMLPQ 193 >gi|126178331|ref|YP_001046296.1| hypothetical protein Memar_0381 [Methanoculleus marisnigri JR1] gi|125861125|gb|ABN56314.1| protein of unknown function DUF114 [Methanoculleus marisnigri JR1] Length = 276 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 33/189 (17%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+E++ I + + + L +PGG + E I A+++ K + V V Sbjct: 69 INDSEEVLRAIRLTAPEMPID---LILHTPGGLILSSEQIAMALRRHKGK--VTVFVPHY 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGV-LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI A++ +V E +++G + + +YP Sbjct: 124 AMSGGTLICLAADEVVMDENAVLGPVDPRIGEYPAASLL---------------RVPRLK 168 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSE--SRNIPYDKTLVLS---DGRIWTG----- 215 P E++ + ++ D+ + V++ + + L+ G WT Sbjct: 169 PPEEIDDETF-VLVDIAAKAQTQMREFVADLLRERMDAGRADSLARLLSGGTWTHDYPIT 227 Query: 216 -AEAKKVGL 223 +A+++GL Sbjct: 228 FEQARELGL 236 >gi|34765052|ref|ZP_00145344.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885610|gb|EAA23058.1| Putative signal peptide peptidase sppA [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 216 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 20/181 (11%) Query: 86 IFRAIQKVKNR-KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP- 143 + + + K +I + Y ++ +N I + + YPY + Sbjct: 1 MAHELSMARAANKKIIAYFENVGRK-NYYLASYANEIYMPSANSTN----VNIYPYFREE 55 Query: 144 -----FLDKLGVSIKSVKSSPMKAEPS--PFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 DK GV + K+ S ++ +A + V+D +Y+ F+ +VS + Sbjct: 56 FYIKQLADKFGVKFNIIHVGDYKSYMENLASSTMSKEAREDTVRVLDKNYNNFLDVVSLN 115 Query: 197 RNIPYDKTLV-LSDGRIWTGA--EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN 253 R I D + DG + + + LID + + +G I ++++ Sbjct: 116 RKINRDDLDKIIKDGELVAASSVDLMNNNLIDKYAYWDNIISM---VGGKDKIITVQEYT 172 Query: 254 P 254 Sbjct: 173 K 173 >gi|255523909|ref|ZP_05390872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] gi|296185149|ref|ZP_06853559.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] gi|255512340|gb|EET88617.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] gi|296049983|gb|EFG89407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] Length = 194 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 33/192 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ ++ ++ + ++ + ++SPGGS AG AI+ +Q +K+ Sbjct: 29 IIMLNGEVTDASASVIVAQLLFLEANNPDEDIHFYINSPGGSITAGMAIYDTMQYIKSD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS G + A A S + I Y + + + + Sbjct: 88 -VSTICVGMAASMGSFLLAAGEPGKRYALPNSEI-LIHQPSVYGGFQGQATDIKIHTDWL 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K +SE K ++ ++ ++ Y + Sbjct: 146 LKTK-KKMNKIYSEKTGKPIEQIEKDMERDY-------------------------FMSA 179 Query: 216 AEAKKVGLIDVV 227 EA + GL+D + Sbjct: 180 KEAVEYGLVDKI 191 >gi|327252451|gb|EGE64110.1| clp protease family protein [Escherichia coli STEC_7v] Length = 629 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 49/236 (20%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCA 117 + I+ +A+ + + + SPGG + G AI+ A++ +K I + MAAS I+ Sbjct: 34 DEINACGNASEIHLRIHSPGGDIFEGLAIYNALKNHPAKK--IVHIEGMAASMASFIAMC 91 Query: 118 SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 + IV E ++ + + + V + V+ Sbjct: 92 GDHIVMPENAM------MMIHA------------PRGVTAGVSGD------------VRR 121 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQS 236 D++D + + + + W G E K G D EV + Sbjct: 122 FADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFAD------EVIPA 175 Query: 237 LYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLWAVWN 292 + A+ +S R N P+ I S++ +Q ++ G+ ++ Sbjct: 176 ITAMARIESKRIGDFSNMPEK----------IKSMISQKTGSGEQERLNGIRELFG 221 >gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166201809|sp|A4XHW0|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease proteolytic subunit ClpP [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 195 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGGS AG AI+ IQ +K Sbjct: 30 IVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGFAIYDTIQYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSL------VGSIGVLFQYPYVKPFLDKLG 149 V T MAAS +L++ + A S +G GV Q +K Sbjct: 89 -VSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIG--GVRGQATDIK------- 138 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + ++ ++ ++E P + ++ Sbjct: 139 IHAEWIL--------------------KIKQRINRI-------LAERTGQPIEVIERDTE 171 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + T EA K G+ID V Sbjct: 172 RDFFMTAEEALKYGIIDKV 190 >gi|184153715|ref|YP_001842056.1| phage Clp-protease [Lactobacillus reuteri JCM 1112] gi|227365058|ref|ZP_03849093.1| S14 family endopeptidase ClpP [Lactobacillus reuteri MM2-3] gi|325681598|ref|ZP_08161119.1| ATP-dependent Clp protease, protease subunit [Lactobacillus reuteri MM4-1A] gi|183225059|dbj|BAG25576.1| phage clp-protease [Lactobacillus reuteri JCM 1112] gi|227069908|gb|EEI08296.1| S14 family endopeptidase ClpP [Lactobacillus reuteri MM2-3] gi|324979063|gb|EGC16009.1| ATP-dependent Clp protease, protease subunit [Lactobacillus reuteri MM4-1A] Length = 244 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 46/201 (22%) Query: 40 RIAIRGQIEDSQELI------------ERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +I ++G I + + ++E + + + V ++S GGS +A I+ Sbjct: 4 KINVKGVIVSNDDADIYDWLGYDCVSPNQVEDVLNNSDED-IEVDIASGGGSVFAASEIY 62 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ + V+ + +AASA +I+ A + I + TS + + Sbjct: 63 TMLKAYSGK--VVVNIQGLAASAASVIAMAGDEINMSPTS------QMMIH--------- 105 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 ++ ++ +M + ++Y + D L L Sbjct: 106 ---KASTISMGNADDFAHDSKMLD-----VMDQSIVNAYEA-------KTGMDRDDILQL 150 Query: 208 SDGRIW-TGAEAKKVGLIDVV 227 W T +A G D + Sbjct: 151 MANETWMTAQDAVDKGFADNI 171 >gi|148544339|ref|YP_001271709.1| peptidase S14, ClpP [Lactobacillus reuteri DSM 20016] gi|148531373|gb|ABQ83372.1| peptidase S14, ClpP [Lactobacillus reuteri DSM 20016] Length = 243 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 46/201 (22%) Query: 40 RIAIRGQIEDSQELI------------ERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +I ++G I + + ++E + + + V ++S GGS +A I+ Sbjct: 3 KINVKGVIVSNDDADIYDWLGYDCVSPNQVEDVLNNSDED-IEVDIASGGGSVFAASEIY 61 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ + V+ + +AASA +I+ A + I + TS + + Sbjct: 62 TMLKAYSGK--VVVNIQGLAASAASVIAMAGDEINMSPTS------QMMIH--------- 104 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 ++ ++ +M + ++Y + D L L Sbjct: 105 ---KASTISMGNADDFAHDSKMLD-----VMDQSIVNAYEA-------KTGMDRDDILQL 149 Query: 208 SDGRIW-TGAEAKKVGLIDVV 227 W T +A G D + Sbjct: 150 MANETWMTAQDAVDKGFADNI 170 >gi|167630380|ref|YP_001680879.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1] gi|167593120|gb|ABZ84868.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1] Length = 255 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ + + +++ L++ GG AG AI + + KP ++ V S Sbjct: 79 EHILPQLVALEQSKDIEGVLLILNTVGGDVEAGLAIAEMVASLS--KPSVSIVLGGGHSI 136 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ S++ S + +P + + + Sbjct: 137 GVPIAVSADY------SMIASTATMTIHP----------IRLTGLVIGV---------PA 171 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGR-------IWTGAEAKKV 221 + ++ MQD V V V+ + I +K L G + G EA + Sbjct: 172 TFEYLEKMQDRV-------VAFVTRNSRITPEKFKELMFKTGELTRDIGTVVVGKEAVEY 224 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG E + L L Sbjct: 225 GLIDAVGGISEAVKKLNEL 243 >gi|78212384|ref|YP_381163.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CC9605] gi|124013824|sp|Q3ALC4|CLPP3_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|78196843|gb|ABB34608.1| Endopeptidase Clp [Synechococcus sp. CC9605] Length = 200 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSE--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + VA S + ++ Q + I++ + MK + Sbjct: 102 MGAFLLAAGTKGKRVALPHSRI----MIHQPLGGTSRRQASDIEIEAREILRMKEMLNRS 157 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 S+++ ++ + ++ D Y + EAK+ GLID Sbjct: 158 LSDMSGQSFEKIEKDTDRDY-------------------------FLSAEEAKEYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|291296198|ref|YP_003507596.1| hypothetical protein Mrub_1818 [Meiothermus ruber DSM 1279] gi|290471157|gb|ADD28576.1| protein of unknown function DUF107 [Meiothermus ruber DSM 1279] Length = 424 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 86/239 (35%), Gaps = 59/239 (24%) Query: 15 LSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVS 72 L ++ L V F+ + I I G I+ + + + +++ R + A+ ++ Sbjct: 4 LLVILLLVASFAQA--------RTYIIPIEGTIDGPLATFVEQSLDQAER-EGASGVVFR 54 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 +++PGG A I I + + P + V A SAG LIS A+ I+ S +G Sbjct: 55 VNTPGGRVDAAIRITDRI--LSSTVPTLAVVEN-AFSAGALISLAAQQIMMLPGSNIG-- 109 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 L V+I + + A+ + V+ + F R Sbjct: 110 -------------AALPVTITPIVGNTNAAD---------------RKVISALKGKF-RA 140 Query: 193 VSESRNIPYDKTLVLSDGRI-------------WTGAEAKKVGLID-VVGGQEEVWQSL 237 V+E+RN P + + D + + A ++ + D V + Sbjct: 141 VAEARNRPANIAEAMVDPEVEVRGITTRGEPLTLSARRAVELKVADAEVASLRAALEKA 199 >gi|242398666|ref|YP_002994090.1| NfeD nodulation like protein, probable membrane protein [Thermococcus sibiricus MM 739] gi|242265059|gb|ACS89741.1| NfeD nodulation like protein, probable membrane protein [Thermococcus sibiricus MM 739] Length = 451 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSL 73 L+ + F + + + +VA+I +G+I + I R +A A+I+ L Sbjct: 7 ILIAAFLFIFLTPALAQASVVYVAQI--KGEITPYTYDQFDRYISEAERA-NANAIIILL 63 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAETSLVG 130 +PGG A A + I I+ PVIT V MAASAG I+ S++I A + +G Sbjct: 64 DTPGGRADAMQNIIERIK--SAEVPVITYVYPPGGMAASAGTYIALGSHLIAMAPGTSIG 121 Query: 131 SIGVLFQY 138 + + Y Sbjct: 122 ACRPILGY 129 >gi|327399387|ref|YP_004340256.1| hypothetical protein Hipma_1235 [Hippea maritima DSM 10411] gi|327182016|gb|AEA34197.1| protein of unknown function DUF114 [Hippea maritima DSM 10411] Length = 287 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 40/208 (19%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ I D + + +PGG A A I A+ K + VI + Sbjct: 72 IEDSEAILRAIRMTPEDMPIDMI---IHTPGGVALAATQIAHALADRKAKVKVI--IPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ I+ +++G + L P VK +K Sbjct: 127 AMSGGTLIALAADEIIMDNYAVLGPVDPQLGNEPAAS-----------IVKIKELKDA-- 173 Query: 166 PFSEVNPKAVQMM---QDVVDSSYHWFVRLVSESRNIPYDKTLVLS----DGRIWTG--- 215 +++ + + + Q ++ ++ L+ + + ++ G+ WT Sbjct: 174 --KDISDETLVKIDISQKALNQMHNTVKSLLLKK-GYNEESANRIASELSSGK-WTHDYP 229 Query: 216 ---AEAKKVGLIDVVGGQEEVWQSLYAL 240 +AKK+GL + +V + +YAL Sbjct: 230 ITVEQAKKLGL--KIST--DVPKEVYAL 253 >gi|75762668|ref|ZP_00742509.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489848|gb|EAO53223.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 227 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 53/211 (25%) Query: 38 VARIAIRGQIEDSQE----------------LIERIERISRDDSATALIVSLSSPGGSAY 81 +I ++G I + E + + + + DD LIVS++SPGG + Sbjct: 6 TVKIDVKGPIISNDEAWIYDWFEMDATSPGKISKELTNANGDD----LIVSINSPGGYVH 61 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G I+ A++ V ++ +AASA +I+ A + + + T+ + + Sbjct: 62 EGSEIYTALKNYPGN--VEVQIVGLAASAASVIAMAGDKVQISPTA------QIMIH--- 110 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + G K++ M + ++ V S Sbjct: 111 NASMWNGGDHRDMEKAAEM---------LKTTDRAIVNAYVIKS------------GKSE 149 Query: 202 DKTLVLSDGRIWTG-AEAKKVGLIDVVGGQE 231 + L + W G +A + +D + + Sbjct: 150 KELLNMMAEETWMGPQQALENNFVDEIMFMD 180 >gi|186685824|ref|YP_001869020.1| hypothetical protein Npun_R5779 [Nostoc punctiforme PCC 73102] gi|186468276|gb|ACC84077.1| protein of unknown function DUF114 [Nostoc punctiforme PCC 73102] Length = 297 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I RA+ + + + V V Sbjct: 68 TIEDSEQILRAIRLTPPDVPID---LILHTPGGLVLATEQIARALIRHQAK--VTVFVPH 122 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G +++ AS+ I+ +++G Sbjct: 123 YAMSGGTMLALASDEIIMDANAVLG 147 >gi|167461037|ref|ZP_02326126.1| serine protease (phage related-protein, ClpP family) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 238 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 43/207 (20%) Query: 31 VEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + + A I I G I + E ++R+ + + ++SPGGS + Sbjct: 1 MSADGSSSADIFIYGDIVTYQWDEVDTSAASFKEDLDRLGDLSTIN---LYINSPGGSVF 57 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G AI +++ K V V +AAS +I+ A + I + S+ L + Sbjct: 58 EGIAIHNMLKRHKAN--VHVYVDALAASIASVIAMAGDTIYMPKNSM------LMIH--- 106 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + + + +Y + Sbjct: 107 ---------NPWIFAWGNASEMRKI-----ADDLDRIGNSSKQTYLQ-----KAGDKLSD 147 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +K + D W + EA + GL DVV Sbjct: 148 EKLQEMLDAETWLSADEAFEYGLCDVV 174 >gi|154502755|ref|ZP_02039815.1| hypothetical protein RUMGNA_00569 [Ruminococcus gnavus ATCC 29149] gi|153796638|gb|EDN79058.1| hypothetical protein RUMGNA_00569 [Ruminococcus gnavus ATCC 29149] Length = 229 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 92/232 (39%), Gaps = 55/232 (23%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPG 77 + + ++ + I G+IE + LI R+ + DD +++ L++ G Sbjct: 26 NGNGHKANIQLLTIIGEIEGHEAVSGNTKATKYEHLIPRLAEVEDDDEVDGVLILLNTLG 85 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL-----VGS- 131 G AG AI I + KP ++ V + S G ++ +++ + V S Sbjct: 86 GDVEAGLAIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTMIVHPVRSS 143 Query: 132 ---IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 IGV+ Y ++ D++ + + + S++ + ++ + ++DS+ Sbjct: 144 GMFIGVIQSYRNMEKTQDRI---TRFIAA---------HSQITKERLEEL--MLDST--Q 187 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 V+ V G + G +A + G+ID VGG + L + Sbjct: 188 LVKDV----------------GTMLEGEDAVREGMIDEVGGISMALKKLREM 223 >gi|167748876|ref|ZP_02421003.1| hypothetical protein ANACAC_03650 [Anaerostipes caccae DSM 14662] gi|317470284|ref|ZP_07929678.1| Clp protease [Anaerostipes sp. 3_2_56FAA] gi|167651846|gb|EDR95975.1| hypothetical protein ANACAC_03650 [Anaerostipes caccae DSM 14662] gi|316902257|gb|EFV24177.1| Clp protease [Anaerostipes sp. 3_2_56FAA] Length = 239 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 55/224 (24%) Query: 38 VARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 + + + G+IE Q +I + + D +++ L++ GG G A Sbjct: 43 IHVMTVIGEIEGHQLSPQNSKTTKYEHMIPALAKAEYSDDIKGILILLNTVGGDVECGLA 102 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 + I + KP +T V + S G ++ +S+ +++ + +P Sbjct: 103 LAEMIASLS--KPTVTLVLGGSHSIGVPLAVSSDYSFIVKSA------TMMIHPVRS--- 151 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 S + + + +QD + R +S+ +I DK Sbjct: 152 -----------SGTFIGVLQSYRNI-----EKIQDRI-------TRFISDHSDIAEDKVE 188 Query: 206 VLS---------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L G + G +A ++GLI+ +GG E + L L Sbjct: 189 ELMLHIGEQVKDAGTVLEGEQAVELGLINEIGGMSEAFAKLKEL 232 >gi|153932099|ref|YP_001384751.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397] gi|152928143|gb|ABS33643.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397] Length = 252 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 37/218 (16%) Query: 27 WSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRD-DSATALIVSLSSPGGSA 80 W + ++ I G I +D+ + + L + ++SPGGS Sbjct: 7 WEVKNSTENENIGEAYIYGDIVSYKWDDTDTTAKSFKEDLDSLGDIDTLNIYINSPGGSV 66 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + G+AI+ I++ K + + V +AAS +I+ A N I + S+ + + Sbjct: 67 FQGQAIYNIIKRHKAK--INIHVDGVAASIASVIAMAGNTIFMPKNSM------MMIH-- 116 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + K + ++ + ++++ + Sbjct: 117 ----------NPWTFAYGNAKE----LRKQADDLDKIRESLIEAYLS------KAGDKLS 156 Query: 201 YDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSL 237 + + + D W T E GL D + ++E+ S+ Sbjct: 157 RETLIGIMDNETWLTAQECYDYGLCDELVEEKEIAASI 194 >gi|227495366|ref|ZP_03925682.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436] gi|226831120|gb|EEH63503.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436] Length = 205 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 37/200 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K Sbjct: 34 IIWLGGEVRDENANQICAQMLLLAAEDPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPD- 92 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS G + + A A + + + L +G + + Sbjct: 93 -VVTVATGIAASMGQFLLTAGAKGKRYATPHARI----------LLHQPLGGVGGTTTEI 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 + + D++ + +E ++ +D W T Sbjct: 142 RINA--------------------DLILQMKRELAEITAERTGKTVEQIHADADRDHWYT 181 Query: 215 GAEAKKVGLIDVVGGQEEVW 234 EA + G D + + + Sbjct: 182 AQEALEYGFFDHIVTKADAV 201 >gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9515] gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9515] Length = 201 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 38/183 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + DD+ + + ++SPGGS AG AI+ I+ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSDDNTKPIYLYINSPGGSVTAGLAIYDTIKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKL--GVSIKSVKSSPMKAEPS 165 +L+ + VA S + + + + + I++ + +K + Sbjct: 102 MGAFLLGAGTKGKRVALPHSR------IMIHQPLGGTSQRQASDIEIEAREILRIKDMLN 155 Query: 166 -PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +++ ++ + ++ D Y + EAK GLI Sbjct: 156 KSMADMTGQSFEKIEKDTDRDY-------------------------FLSAEEAKNYGLI 190 Query: 225 DVV 227 D V Sbjct: 191 DRV 193 >gi|228960167|ref|ZP_04121825.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799517|gb|EEM46476.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 240 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 81/255 (31%), Gaps = 50/255 (19%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + A + I G+I S ++ + D + + ++SPGGS + Sbjct: 3 ASANGKTADVFIYGEITKYAWEEYGEVSSITFKNELDELGDD--IETINLYINSPGGSVF 60 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + + VI+ + + AS ++ S+ I+ S+ + + Sbjct: 61 ETMAIIAMLQRHQAK--VISYIDGIGASCASVLPMISDKIIMYANSM------MMIH--- 109 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + S + ++ Q +V L + Sbjct: 110 ---------NAWTYASGN----ADQLRKAADDIERINQSMVQHY------LTRAGEKLDE 150 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 D L D W + EA GL D + L + +K++ Sbjct: 151 DTLKQLLDAETWLSAEEAMGYGLCDEIISANNAAACL-------DEKWMKEYKNIPQQLV 203 Query: 261 CDLKNLSISSLLEDT 275 N+S + +LE Sbjct: 204 NAQANISSNEMLERQ 218 >gi|218672149|ref|ZP_03521818.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli GR56] Length = 203 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEAENPKKPINLYINSPGGVVTSGLAMYDTMRFIRA-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEAGERAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERGMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVV 227 EA + GLID + Sbjct: 182 EEALEWGLIDRI 193 >gi|11498462|ref|NP_069690.1| hypothetical protein AF0856 [Archaeoglobus fulgidus DSM 4304] gi|2649747|gb|AAB90383.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 291 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS++++ I +D + + +PGG A I +A+ + VI Sbjct: 81 IDDSEKVLRAIRSTPKDKPID---LIIHTPGGLVLAATQIAKALHDHPAKTTVIV--PHY 135 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 136 AMSGGTLIALAADEILIDPHAVLG 159 >gi|297562336|ref|YP_003681310.1| endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846784|gb|ADH68804.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 210 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 40/200 (20%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI GQ D + L+ + +S +D + + ++SPGGS AG AI+ +Q + N Sbjct: 35 RIVFLGQQVDDEIANRLVGELLLLSAEDRQRDITMYINSPGGSVTAGMAIYDVMQYIPND 94 Query: 97 KPVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS G ++ CA A + V+ P Sbjct: 95 --VRTVGIGMAASMGQMLLCAGAPGKRYALPHTR-----VMMHQP--------------- 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW 213 S + S ++ D + F+ +SE ++ +D R + Sbjct: 133 --SGGIGGTASDIR--------ILADQLLYVKKMFIEKISEHTGQTVEQIEKDADRDRWF 182 Query: 214 TGAEAKKVGLIDVV--GGQE 231 T E+K+ G ID V G + Sbjct: 183 TAKESKEYGFIDEVLEGTLD 202 >gi|294101566|ref|YP_003553424.1| protein of unknown function DUF114 [Aminobacterium colombiense DSM 12261] gi|293616546|gb|ADE56700.1| protein of unknown function DUF114 [Aminobacterium colombiense DSM 12261] Length = 273 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 23/184 (12%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+E++ I S + + +PGG A E I A++K + V V Sbjct: 67 IEDSEEVLRAIRLTSEGTPID---LIIHTPGGLLLAAEQIAYALKKHPAK--VTVVVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ I+ + +++G + + QYP V K V S ++ Sbjct: 122 AMSGGTLIALAADEILMDKHAVLGPVDPQIGQYPAASILRA---VEEKPV--SEVEDTTL 176 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW------TGAEAK 219 ++V+ KAV+ + V + + LVL++GR W T EA+ Sbjct: 177 ILADVSRKAVKQTRSFVFNLLKD-----RMGDEKATELALVLTEGR-WTHDYPITAEEAQ 230 Query: 220 KVGL 223 +GL Sbjct: 231 ALGL 234 >gi|187776850|ref|ZP_02993323.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC 15579] gi|187775509|gb|EDU39311.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC 15579] Length = 194 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 76/196 (38%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + ++ D+ ++ ++ + +D + + ++SPGGS +G AI+ +Q +K Sbjct: 29 IIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIYLYINSPGGSITSGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S V + + +G+ Sbjct: 88 -VSTICVGMAASMGAFLLAAGAKGKRYALPNSEV------MIHQPLGGFRGQATDIGIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + K + + ++ S+ P ++ + ++ Sbjct: 141 ERIL----------------KMKKKLNTIL-----------SDRTGKPLEQVELDTERDH 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 174 FLSAEEAKEYGLIDEV 189 >gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lyngbya majuscula 3L] gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lyngbya majuscula 3L] Length = 198 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++I + + +D++ +I+ ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLGKEVDDEITNQIIAVMLYLDSEDNSKDIILYINSPGGSVTAGMAIYDTMQHIKSD- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ +A S + + Sbjct: 91 -VVTVCVGLAASMGSFLLAAGKKGKRIALPHSR------IMIH------------QPSGG 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ + + ++ ++ Y +++ +K D + + Sbjct: 132 TRGQATDI-----EIEAREILRIRHQLNEIY-------AQNTGQSLEKIEKDMDRDFFMS 179 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 180 ADEAKEYGLIDQV 192 >gi|310790485|gb|EFQ26018.1| ATP-dependent Clp protease proteolytic subunit [Glomerella graminicola M1.001] Length = 248 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 82/214 (38%), Gaps = 30/214 (14%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I+D S ++ ++ + D A+ + ++SPGGS +G AI+ + +K+ Sbjct: 59 IVCLNGAIDDTVSASIVAQLLWLESDSPDKAITMYINSPGGSVSSGLAIYDTMTYIKS-- 116 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A+S L+ + A S S+ + + + + + Sbjct: 117 PVSTVCLGAASSMAALLLTGGEAGKRYALPHS---SVMIHQPLGGTQGQASDILIYANQI 173 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE-SRNIPYDKTLVLSDGRIWT 214 + + ++M+ ++ S+ + E + DK L T Sbjct: 174 ------------QRIRKQINEIMKRHINKSFGQEKYSLEEIHDMMERDKYL--------T 213 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 EAK++G+ID + + E D+ K Sbjct: 214 AEEAKEIGVIDEILTRREEKDLKEKDSTDEKKTK 247 >gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|124013830|sp|Q49VZ2|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 194 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 75/199 (37%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + QI+D + ++ ++ + D+ + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + ++++E +K +D R Sbjct: 134 -----------------TEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 + EAK GL+D V E Sbjct: 176 SAEEAKDYGLVDQVMVPES 194 >gi|167768863|ref|ZP_02440916.1| hypothetical protein ANACOL_00180 [Anaerotruncus colihominis DSM 17241] gi|167669035|gb|EDS13165.1| hypothetical protein ANACOL_00180 [Anaerotruncus colihominis DSM 17241] Length = 432 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 37/185 (20%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP-VITEVHEMAASA 110 E ++ +E+I++ ++ + ++S GG A I ++++ +I V +A S Sbjct: 80 EFLDDLEQIAK---CKSITIRMNSYGGDAGVSNTIHNRLRELARNGAELICVVDGVAMSG 136 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G LI CA + + +SL + + S A Sbjct: 137 GSLIMCACDTVRVNPSSL------IMIH------------KCWSYIWGDYNA-------- 170 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV--LSDGRIWTGAEAKKVGLIDVVG 228 + QM + ++ + + + D L ++D TG EA G D V Sbjct: 171 -DELRQM--ADQNDAWDKMQITIYKRKTGLSDTVLSHMMADTTYMTGKEAVDKGFADEV- 226 Query: 229 GQEEV 233 E+ Sbjct: 227 -LEDA 230 >gi|190570808|ref|YP_001975166.1| minor capsid protein c (fragment) [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357080|emb|CAQ54482.1| minor capsid protein c (fragment) [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 158 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 13/88 (14%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V N A IAI G + +++ E IE + +++ + SPG Sbjct: 40 VNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPG 99 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHE 105 G + I + + +K +I ++ Sbjct: 100 GEVNGIFDLADFIYESRAKKRIIAIAND 127 >gi|253796882|gb|ACT35696.1| capsid protein [Wolbachia phage WO] Length = 119 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + ++++ +Q +D Y FV+L++ +R + +K ++ ++ G A ++GL D + Sbjct: 1 MTSESLESLQKEIDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGERAIEIGLADGI 57 >gi|167630981|ref|YP_001681480.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1] gi|167593721|gb|ABZ85469.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1] Length = 237 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 70/202 (34%), Gaps = 46/202 (22%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKV 93 + + G I + E+ ++ +D+ + + V ++SPGG +A I+ + Sbjct: 17 LYLNGPIAEETWWGDEVTPKL---FKDELLSGSGDITVWINSPGGDVFAAAQIYNMLMDY 73 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 V ++ +AASA +I+ A + + S+ L + + Sbjct: 74 SGN--VTVKIDGLAASAASVIAMAGGDVYMSPVSM------LMIH------------NPS 113 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ + + + ++D + + K L D W Sbjct: 114 TIAIGD------------SEEMLRAKALLDEVKESIINAYELKSGLSRAKLSHLMDAETW 161 Query: 214 -TGAEAKKVGLIDVV---GGQE 231 +A ++G D + GG+E Sbjct: 162 MNAKKAVELGFADKILFMGGEE 183 >gi|238484703|ref|XP_002373590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus flavus NRRL3357] gi|317140707|ref|XP_001818368.2| ATP-dependent Clp protease proteolytic subunit [Aspergillus oryzae RIB40] gi|220701640|gb|EED57978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus flavus NRRL3357] Length = 256 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + + + Sbjct: 71 IICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIAS-- 128 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + Sbjct: 129 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHS---SI---MIHQ---------------- 166 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + +++ ++ Y R ++ + + D+ L + + G Sbjct: 167 PSGGYFGQATDI-AIHAKEILRVREQLNKIY---KRHLTGKKELSLDEIEKLMERDYFMG 222 Query: 216 AE-AKKVGLIDVV 227 A+ A ++G++D + Sbjct: 223 AQEALEMGIVDEI 235 >gi|145233903|ref|XP_001400324.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus niger CBS 513.88] gi|134057262|emb|CAK96425.1| unnamed protein product [Aspergillus niger] Length = 251 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 80/199 (40%), Gaps = 33/199 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + + + Sbjct: 71 IICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIAS-- 128 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + P Sbjct: 129 PVSTICVGQAASMGSLLLCGGHPGKRFCLPHS---SI--MMHQP---------------- 167 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + S ++ K + ++ ++ Y R ++ + + D+ L + + G Sbjct: 168 -SGGYFGQASDI-AIHAKEILRVRSQLNKIY---KRHLTGKKEMTLDEIEKLMERDYFMG 222 Query: 216 -AEAKKVGLIDVVGGQEEV 233 EA +G++D + + Sbjct: 223 AKEALDMGIVDEILDRRAA 241 >gi|229076635|ref|ZP_04209575.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock4-18] gi|228706461|gb|EEL58694.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock4-18] Length = 236 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 63/178 (35%), Gaps = 33/178 (18%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 +I + + + L+VS++SPGG G I+ A++ V ++ +AASA I Sbjct: 7 SKISKELENANGEELVVSINSPGGYVNEGSEIYTALKNYPGH--VEVQIVGLAASAASFI 64 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A+N + + T+ + + + G K++ M Sbjct: 65 AMAANKVRISPTA------QIMIH---NASMWNGGDHRDMEKAAEMLKITD--------- 106 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQE 231 ++ V S ++ L + W G +A + +D + E Sbjct: 107 RAIVNAYVIKS------------GKSEEELLNMMAEETWMGPQQALENNFVDEIMFME 152 >gi|217967156|ref|YP_002352662.1| protein of unknown function DUF107 [Dictyoglomus turgidum DSM 6724] gi|217336255|gb|ACK42048.1| protein of unknown function DUF107 [Dictyoglomus turgidum DSM 6724] Length = 423 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 11/131 (8%) Query: 37 HVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 +V I I+G IE +E + + +A A I + + GG A I AI + Sbjct: 24 NVYVIPIKGTIELGLASFVE--RSLKENPNAKAFIFEIDTFGGRVDAAIRIRDAI--LST 79 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 I + + A SAG LI+ + I+ + + GSIG P + + L + Sbjct: 80 PNLTIAFIKDRAWSAGALIALSCEKIIISPS---GSIGAAEPRPAEEKTISALKAEFE-- 134 Query: 156 KSSPMKAEPSP 166 S+ K + +P Sbjct: 135 -STAKKRQRNP 144 >gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfuromonas acetoxidans DSM 684] gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfuromonas acetoxidans DSM 684] Length = 196 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D S +I ++ + +D + + ++SPGG AG AI+ +Q +K Sbjct: 29 IIFLGGGIDDQISNLVIAQLLFLESEDPEKDIHLYINSPGGVVTAGMAIYDTMQYIKA-- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 PV T AAS L++ + S + + + + + Sbjct: 87 PVSTICVGQAASMGAVLLAAGAEGKRFTLPNSR------IMIHQPLGGFQGQASDISIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ + ++ D G Sbjct: 141 QEILR----------------LREDLNRILAHHCSQDIETIAR------DTERDFFMG-- 176 Query: 213 WTGAEAKKVGLIDVV 227 +A+K GLID + Sbjct: 177 --AEDAQKYGLIDKI 189 >gi|328554274|gb|AEB24766.1| membrane bound hydrolase [Bacillus amyloliquefaciens TA208] gi|328912671|gb|AEB64267.1| putative membrane bound hydrolase [Bacillus amyloliquefaciens LL3] Length = 438 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 7/129 (5%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDD 64 + + KT + L + + + + P V I + +E Q L + R +D Sbjct: 1 MFRKKTGIAVALLGLFVLSLLGVQLNAKADHPSVYVIPVEKNVE--QGLASFLSRSFKDA 58 Query: 65 SATA---LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + +I+ +++PGG+ + I I + PV V++ A SAG I+ ++ I Sbjct: 59 KESGASHIILDINTPGGAVQSALDIADII--GGSDVPVTAYVNKRALSAGAYIALQADEI 116 Query: 122 VAAETSLVG 130 A +G Sbjct: 117 YMAPGGKMG 125 >gi|210612604|ref|ZP_03289395.1| hypothetical protein CLONEX_01597 [Clostridium nexile DSM 1787] gi|210151529|gb|EEA82536.1| hypothetical protein CLONEX_01597 [Clostridium nexile DSM 1787] Length = 236 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 93/237 (39%), Gaps = 55/237 (23%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 + ++ + I G+IE + L+ ++ + ++ L++ L++ GG Sbjct: 26 NNRKHNIQLLTIIGEIEGHEAVSGNTKATKYEHLLPKLAEVEDNEEIEGLLILLNTLGGD 85 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL-----VGS--- 131 AG AI I + KP ++ V + S G ++ +++ + V S Sbjct: 86 VEAGLAIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTMIIHPVRSNGM 143 Query: 132 -IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 IGV+ Y ++ D++ + S + + ++ + ++DS+ V Sbjct: 144 FIGVIQSYRNMERTQDRI------------IRFLAGHSHMTQERIEEL--MLDST--QLV 187 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 + V G + G EA K GLID VGG + L+ + ++I+ Sbjct: 188 KDV----------------GTLLEGEEAVKEGLIDAVGGMSDALTKLHEMIEKKTIK 228 >gi|225851240|ref|YP_002731474.1| periplasmic serine protease [Persephonella marina EX-H1] gi|225646154|gb|ACO04340.1| periplasmic serine protease [Persephonella marina EX-H1] Length = 288 Score = 64.0 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 11/116 (9%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I + + + +PGG A A I +A+ K PV + Sbjct: 72 TIEDSEQVLRAIRMTPNNMPIDFI---IHTPGGLALAATQIAQALVDHKA--PVRVIIPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG------VLFQYPYVKPFLDKLGVSIKSV 155 A S G LI+ A++ I+ E +++G + ++ + + +++ Sbjct: 127 YAMSGGTLIALAADEIIMDEHAVLGPVDPQLGQEPAASIVNIEKLKEPKDIDDETL 182 >gi|254448838|ref|ZP_05062294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma proteobacterium HTCC5015] gi|198261528|gb|EDY85817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma proteobacterium HTCC5015] Length = 236 Score = 64.0 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+E+ + ++ ++ + D+ + + ++SPGGS AG AI+ ++ +K Sbjct: 72 VIFMVGQVEEHMANLIVAQLLFLEADNPDKDISLYINSPGGSVTAGMAIYDTMRFIKPD- 130 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + A S S+ + + + + +++ Sbjct: 131 -VSTLCIGQAASMGAFLLSGGAKGKRFALPNS---SVMIHQPLGGFQGQATDIDIHARNI 186 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVV-DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K + + ++ D + F R+V D G Sbjct: 187 L----------------KTKEKLNRMLADHTGQPFERVV-------EDTERDNFMG---- 219 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 220 ADEAKEYGLIDDV 232 >gi|163759316|ref|ZP_02166402.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea phototrophica DFL-43] gi|162283720|gb|EDQ34005.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea phototrophica DFL-43] Length = 210 Score = 64.0 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 37/202 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 37 IIFITGPVEDHMATLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T AAS G L+ CA A + V + Sbjct: 96 -ISTLCVGQAASMGSLLLCAGEKGMRFATPNARV------MVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + Y+ D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKMKRRLNEVY-------VKHTGQDYETVEKTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQS 236 EA + GLID V + E ++ Sbjct: 185 AEEALEFGLIDRVFDKRENIEA 206 >gi|331091074|ref|ZP_08339916.1| hypothetical protein HMPREF9477_00559 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405296|gb|EGG84832.1| hypothetical protein HMPREF9477_00559 [Lachnospiraceae bacterium 2_1_46FAA] Length = 226 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 80/224 (35%), Gaps = 37/224 (16%) Query: 37 HVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++ + I G+IE + L+ ++ + + L++ L++ GG AG Sbjct: 28 NIQLLTIIGEIEGHEAVSGNTKATKYEHLLPKLAEVEDSEEIEGLLILLNTLGGDVEAGL 87 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI I + KP ++ V + S G ++ +++ + G + +P Sbjct: 88 AIAEMIASLS--KPSVSLVLGGSHSIGGPLAVSADYSFIVPS------GTMVIHPVRS-- 137 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 S + + + + + + + E P Sbjct: 138 ------------SGTFIGVMQSYRNM-ERTQNRITKFISEHANISQERIEELMLDPTQLV 184 Query: 205 LVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + G + G EA K GLID VGG +E Q L+ L Q+ K Sbjct: 185 KDV--GTMLEGEEAVKEGLIDEVGGMKEALQKLHELIEIQAKNK 226 >gi|126660899|ref|ZP_01731990.1| hypothetical protein CY0110_21440 [Cyanothece sp. CCY0110] gi|126617796|gb|EAZ88574.1| hypothetical protein CY0110_21440 [Cyanothece sp. CCY0110] Length = 217 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I RA+ +++ V V Sbjct: 5 SIEDSEQVLRAIRLTPPDTPID---LILHTPGGLVLATEQIARAL--IRHPSKVTVFVPH 59 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G +++ A++ I+ +++G Sbjct: 60 YAMSGGTMLALAADEIIMDANAVLG 84 >gi|225416613|ref|ZP_03761802.1| hypothetical protein CLOSTASPAR_05837 [Clostridium asparagiforme DSM 15981] gi|225041859|gb|EEG52105.1| hypothetical protein CLOSTASPAR_05837 [Clostridium asparagiforme DSM 15981] Length = 293 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 83/225 (36%), Gaps = 55/225 (24%) Query: 37 HVARIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 + I I G++E + L + ++ +I DD+ L+V L++ GG AG Sbjct: 98 KIHLITIIGEVEGHENLSGNSKATKYDHVLPQLAQIEDDDTVDGLLVLLNTSGGDVDAGL 157 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI I + P ++ V + S G ++ ++N + G + +P Sbjct: 158 AIAEMIASLS--MPTVSLVLGGSHSIGVPLAVSTNYSFIVPS------GTMMIHP----- 204 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V + + + + + +++ FV + I YD+ Sbjct: 205 -----VRMSGMVIG------------SSQTYEYF-AMIEDRILNFVESHAR---IAYDQL 243 Query: 205 LVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L G + G EA + GLID VGG +E LY + Sbjct: 244 KELMHNTEMLTRDLGTVLVGKEAVEAGLIDEVGGIKEALHKLYQM 288 >gi|220930200|ref|YP_002507109.1| peptidase S14 ClpP [Clostridium cellulolyticum H10] gi|220000528|gb|ACL77129.1| peptidase S14 ClpP [Clostridium cellulolyticum H10] Length = 229 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 43/200 (21%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKV 93 + + G I + E+ +I +D+ + V ++SPGG +A I+ + + Sbjct: 17 LYLNGVISEETWWGDEVTPKI---FKDELLAGTGDITVWINSPGGDVFAAAQIYNMLMEY 73 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V ++ +AASA +I+ A + + S+ L + + Sbjct: 74 TGK--VTVKIDGLAASAASVIAMAGGDVYMSPVSM------LMIH------------NPS 113 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ + + + ++D + + K L D W Sbjct: 114 TIAIGD------------SEEMLRAKALLDEVKESIINAYELKTGLSRTKLSHLMDAESW 161 Query: 214 -TGAEAKKVGLIDVVGGQEE 232 +A ++G D + E Sbjct: 162 MNANKAIELGFADKIMFMES 181 >gi|253578408|ref|ZP_04855680.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850726|gb|EES78684.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 234 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I D+ L++ L++ GG AG AI I + P ++ V S Sbjct: 65 EHVLPKLAIIEDDEEIEGLLILLNTVGGDVEAGLAIAEMIASLS--IPTVSLVLGGGHSI 122 Query: 111 GYLISCASNIIVAAETSL-----VGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ +++ A ++ V S IGV Y ++ D++ Sbjct: 123 GVPMAVSADYSFAVPSATMVIHPVRSNGMFIGVAQTYRNMEKIQDRI------------- 169 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + SE + + + +++++ + V+ V G + G EA K Sbjct: 170 --TTFISEHSKASQKRLEELMLDT-SQLVKDV----------------GTMLEGKEAVKE 210 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG +E LY + Sbjct: 211 GLIDEVGGIKEALAKLYEM 229 >gi|153812753|ref|ZP_01965421.1| hypothetical protein RUMOBE_03160 [Ruminococcus obeum ATCC 29174] gi|149831113|gb|EDM86202.1| hypothetical protein RUMOBE_03160 [Ruminococcus obeum ATCC 29174] Length = 243 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 44/208 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I D++ L++ L++ GG AG AI I + P ++ V S Sbjct: 71 EHVLPKLAMIEDDENVEGLLILLNTVGGDVEAGLAIAEMIASLS--IPTVSLVLGGGHSI 128 Query: 111 GYLISCASNIIVAAETSL-----VGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ +++ A ++ V S IGV Y ++ D++ + + Sbjct: 129 GVPMAVSADYSFAVPSATMVIHPVRSSGMFIGVAQTYRNMEKIQDRI--------TGFIA 180 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 A + + + +++++ + V+ V G + G EA K Sbjct: 181 AH-------SRASQERLEELMLDT-SQLVKDV----------------GTLLEGEEAVKE 216 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 GLID +GG E L+ + +D KI Sbjct: 217 GLIDEIGGIREALAKLHEM-IDAKNNKI 243 >gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus elongatus PCC 6301] gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus elongatus PCC 7942] gi|18203213|sp|Q9L4P3|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|67460443|sp|Q5N1Q7|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus elongatus PCC 7942] gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus elongatus PCC 6301] gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus elongatus PCC 7942] Length = 199 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ + +DS+ + + ++SPGGS AG AI+ +Q +K+ PVIT +AAS Sbjct: 44 ANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKS--PVITICLGLAAS 101 Query: 110 AGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G + CA + +A S + ++ Q + I+ Sbjct: 102 MGAFLLCAGSKGKRLALPHSRI----MIHQPLGGTGRRQASDIEIE-------------- 143 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 K + ++ +++ +++ P +K +D + + EA++ GLID Sbjct: 144 ----AKEILRIKKLLNQI-------MADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQ 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|262047939|ref|ZP_06020882.1| phage Clp-protease [Lactobacillus crispatus MV-3A-US] gi|260571752|gb|EEX28330.1| phage Clp-protease [Lactobacillus crispatus MV-3A-US] Length = 241 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 86/248 (34%), Gaps = 52/248 (20%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 + +++ D + + + ++SPGG AG ++ ++K V +V A SA I Sbjct: 36 DDLKQSLNDANGQDITLEINSPGGYIDAGSEMYTDLKKYPGN--VTAQVVGQACSAASWI 93 Query: 115 SCASNIIVAAETSLVG----SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 + A++ + + T+ + S+GV + L L Sbjct: 94 ALAADKVEMSPTAQMMIHRVSVGVEGNVDDLTSALQSL---------------------- 131 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGG 229 D +D +Y V L S+ + + + W +A G D + Sbjct: 132 ---------DSMDQTY---VDLYSKRTGLDKQEIYRMMCATTWMNAKQAVDKGFADSIMF 179 Query: 230 QEE---VWQSLYALGV--DQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 + + + Y + V +I KIK K+ D + I + EDT Q K Sbjct: 180 ENDQAPAVVNAYGVPVLSSSAINKIKTLIHEKS----DDDSKPIENSKEDTDK--GQVKK 233 Query: 285 QGLWAVWN 292 +W Sbjct: 234 DLSLLLWQ 241 >gi|148381180|ref|YP_001255721.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A str. ATCC 3502] gi|153933152|ref|YP_001385555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A str. ATCC 19397] gi|153934525|ref|YP_001388961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A str. Hall] gi|153939192|ref|YP_001392582.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum F str. Langeland] gi|168179119|ref|ZP_02613783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum NCTC 2916] gi|168183548|ref|ZP_02618212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum Bf] gi|170754567|ref|YP_001782870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum B1 str. Okra] gi|226950659|ref|YP_002805750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A2 str. Kyoto] gi|237796687|ref|YP_002864239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum Ba4 str. 657] gi|166201814|sp|A7FYI2|CLPP_CLOB1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166201815|sp|A5I6W1|CLPP_CLOBH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166201816|sp|A7GIH2|CLPP_CLOBL RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706445|sp|B1IND7|CLPP_CLOBK RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|254763786|sp|C1FLA6|CLPP_CLOBJ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|148290664|emb|CAL84793.1| ATP-dependent Clp protease proteolytic subunit [Clostridium botulinum A str. ATCC 3502] gi|152929196|gb|ABS34696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A str. ATCC 19397] gi|152930439|gb|ABS35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A str. Hall] gi|152935088|gb|ABS40586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum F str. Langeland] gi|169119779|gb|ACA43615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum B1 str. Okra] gi|182670165|gb|EDT82141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum NCTC 2916] gi|182673367|gb|EDT85328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum Bf] gi|226842960|gb|ACO85626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A2 str. Kyoto] gi|229261301|gb|ACQ52334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum Ba4 str. 657] gi|295320566|gb|ADG00944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum F str. 230613] gi|322807545|emb|CBZ05120.1| ATP-dependent Clp protease proteolytic subunit [Clostridium botulinum H04402 065] Length = 194 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 76/196 (38%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + ++ D+ ++ ++ + +D + + ++SPGGS +G AI+ +Q +K Sbjct: 29 IIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S V + + +G+ Sbjct: 88 -VSTICVGMAASMGAFLLAAGAKGKRYALPNSEV------MIHQPLGGFRGQATDIGIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + K + + ++ S+ P ++ + ++ Sbjct: 141 ERIL----------------KMKKKLNTIL-----------SDRTGKPLEQVELDTERDH 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 174 FLSAEEAKEYGLIDEV 189 >gi|167948598|ref|ZP_02535672.1| signal peptide peptidase SppA, 36K type [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 144 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 5/61 (8%) Query: 30 HVEDNSPHVARIAIRGQIE-----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + H A + + G I + +++ + D + +I+ L++PGGS Sbjct: 46 KMAGSEKHTALVEVNGIIAPDTKASADKVVTGLRNAFEDKNTKGVILRLNTPGGSPVQSR 105 Query: 85 A 85 Sbjct: 106 L 106 >gi|187736113|ref|YP_001878225.1| protein of unknown function DUF107 [Akkermansia muciniphila ATCC BAA-835] gi|187426165|gb|ACD05444.1| protein of unknown function DUF107 [Akkermansia muciniphila ATCC BAA-835] Length = 478 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYA-GEAIFRAIQKVKNRKPVITEVHEMAASAG 111 + RI + ++++ A A+I L++PGG A+ E + ++IQ + P V+ A SAG Sbjct: 50 FMNRILKRAQEEQARAVIFDLNTPGGLAWETSEMMMKSIQPL--TIPTYAYVNPRAMSAG 107 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQ 137 LIS A + I A S +G+ G++ Sbjct: 108 ALISAACDKIYMAPVSSIGAAGIITS 133 >gi|121727845|ref|ZP_01680912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae V52] gi|229507982|ref|ZP_04397487.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX 330286] gi|229511781|ref|ZP_04401260.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae B33] gi|229515308|ref|ZP_04404768.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA 21] gi|229518918|ref|ZP_04408361.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae RC9] gi|229523942|ref|ZP_04413347.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv. albensis VL426] gi|229529052|ref|ZP_04418442.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae 12129(1)] gi|229607528|ref|YP_002878176.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae MJ-1236] gi|254849010|ref|ZP_05238360.1| ATP-dependent Clp protease [Vibrio cholerae MO10] gi|255745319|ref|ZP_05419268.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS 101] gi|262156043|ref|ZP_06029163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae INDRE 91/1] gi|262167884|ref|ZP_06035584.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae RC27] gi|297579440|ref|ZP_06941368.1| ATP-dependent Clp protease [Vibrio cholerae RC385] gi|298498040|ref|ZP_07007847.1| clp protease [Vibrio cholerae MAK 757] gi|121629881|gb|EAX62295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae V52] gi|229332826|gb|EEN98312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae 12129(1)] gi|229337523|gb|EEO02540.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv. albensis VL426] gi|229343607|gb|EEO08582.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae RC9] gi|229348013|gb|EEO12972.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA 21] gi|229351746|gb|EEO16687.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae B33] gi|229355487|gb|EEO20408.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX 330286] gi|229370183|gb|ACQ60606.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae MJ-1236] gi|254844715|gb|EET23129.1| ATP-dependent Clp protease [Vibrio cholerae MO10] gi|255737149|gb|EET92545.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS 101] gi|262023611|gb|EEY42312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae RC27] gi|262030221|gb|EEY48865.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae INDRE 91/1] gi|297537034|gb|EFH75867.1| ATP-dependent Clp protease [Vibrio cholerae RC385] gi|297542373|gb|EFH78423.1| clp protease [Vibrio cholerae MAK 757] gi|327484465|gb|AEA78872.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae LMA3894-4] Length = 208 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + ++ + ++ R+ D Sbjct: 153 AQEILTIKNK----------------LNRLLAEHTGQPIEVIE--RDTDRDN-------- 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 187 FMSADQAVEYGLVDAV 202 >gi|116250938|ref|YP_766776.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium leguminosarum bv. viciae 3841] gi|116243107|sp|Q1MK43|CLPP1_RHIL3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|115255586|emb|CAK06667.1| putative ATP-dependent Clp protease proteolytic subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 203 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 73/197 (37%), Gaps = 35/197 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++S + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEAENSKKPINLYINSPGGVVTSGLAMYDTMRFIRA-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEAGGRAALPNA---SILIHQPSGGFQGQASDMMIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERGMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVVGGQEE 232 EA + GLID + E Sbjct: 182 EEALEWGLIDRILTVRE 198 >gi|115384910|ref|XP_001209002.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus terreus NIH2624] gi|114196694|gb|EAU38394.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus terreus NIH2624] Length = 258 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 80/193 (41%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + + + Sbjct: 73 IICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIAS-- 130 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + P Sbjct: 131 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHS---SI--MMHQP---------------- 169 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + S ++ K + +++ ++ Y R ++ + + ++ L + + G Sbjct: 170 -SGGYFGQASDI-AIHAKEILRVREQLNKIY---KRHLTGKKEMSLEEIEKLMERDYFMG 224 Query: 216 -AEAKKVGLIDVV 227 EA +G++D V Sbjct: 225 AKEALDMGIVDEV 237 >gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella australiensis 50-1 BON] gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella australiensis 50-1 BON] Length = 194 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+++D+ ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPGGSVTAGFAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A S + + + Sbjct: 88 -VSTICIGMAASMGAFLLAAGAKGKRYALPNSE------ILIHQPMGGA----------- 129 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++ + + ++ ++ +SE PY+K +D + + Sbjct: 130 -RGQATDIM-----IHAEQIVRIKRRLNEI-------LSERTGQPYEKIEKDTDRDFFMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ G++D V Sbjct: 177 AQEAKEYGIVDEV 189 >gi|145531042|ref|XP_001451293.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418937|emb|CAK83896.1| unnamed protein product [Paramecium tetraurelia] Length = 226 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 20/218 (9%) Query: 35 SPHVARIAIRGQIEDS--QELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 V RI I I +++ + +++ ALI ++S GGS + + I+ Sbjct: 4 RNRVFRIKISSIITPQLVEKVADSLDKWTIYKPEFIALI--INSLGGSLIQTQNLANIIK 61 Query: 92 KVKNRK---------PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 K P+ ++ + + + ++VG++G + + ++ Sbjct: 62 KYSQTNKQSLFQISVPIYCFGEDIVIKSALGLLTIGDKAYVNPYAIVGNMGYVQPFFDLR 121 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 F + K V ++ +P E K + ++ + + + ++ +R + Sbjct: 122 NFASNWFIKQKHVATNDNMKLLNPLCEFAEKDKEWVEQQMKNQEEELIHMIETNRKLDTS 181 Query: 203 KTLVLSDGRIW-TGAEA----KKVGLIDVVGGQEEVWQ 235 K I+ G A K G+ID + V Q Sbjct: 182 KYED-RQKDIYRNGIIAPNLLLKHGIIDGYTSLDNVLQ 218 >gi|316936715|gb|ADU60352.1| capsid protein [Wolbachia phage WO] Length = 135 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 VGGQEEVWQ 235 V E Sbjct: 62 VTTFFEFIN 70 >gi|261210563|ref|ZP_05924856.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC341] gi|262404275|ref|ZP_06080830.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC586] gi|260840348|gb|EEX66919.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC341] gi|262349307|gb|EEY98445.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC586] Length = 208 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K RL++E P + +D R Sbjct: 153 AQEILTIKNKLN---------------------------RLLAEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 185 DNFMSADQAVEYGLVDAV 202 >gi|238917241|ref|YP_002930758.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens ATCC 27750] gi|238872601|gb|ACR72311.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens ATCC 27750] Length = 236 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 55/228 (24%) Query: 34 NSPHVARIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSPGGSAY 81 + I I G+IE L + ++ I D ++ +++ GG Sbjct: 39 TKNALQVITIIGEIEGHDNLPATSKATKYEHMLPKLAEIEMDKDIKGVLFIMNTVGGDVS 98 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV--------GS-I 132 AG A+ I +K KP ++ + + S G ++ +++ T+ + G+ I Sbjct: 99 AGLALAEMIASMK--KPTVSLIIGDSHSIGVPLAVSTDYSFIVPTATMIIHPVRMNGTLI 156 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 GV Y Y + D+ + S + S V+ + V+ M +VD++ Sbjct: 157 GVQQTYDYFERISDR-------ITS-----FIATHSNVSKERVEKM--MVDTT------- 195 Query: 193 VSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + D G + G +A + GLI VGG + L +L Sbjct: 196 -----QLSKDL------GTVLVGRQAVEEGLICEVGGISDALAKLDSL 232 >gi|34762173|ref|ZP_00143180.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27888134|gb|EAA25193.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 344 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 78/194 (40%), Gaps = 44/194 (22%) Query: 41 IAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I GQI + ++ + +E D + + ++SPGGS G AI+ A++ Sbjct: 16 IQIYGQIGGFSWFDEPVSADQVYKELENFGND--IDTINLYINSPGGSVTEGCAIYSALK 73 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + K K V + +S +I+ A + I + + + + + G + Sbjct: 74 RHKAVKNVY--IDGQCSSIASVIAMAGDKIAMSPVA------TMMIHNPITAL---AGDA 122 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 I+ K++ + +M++ + ++Y V++S ++ ++ L D Sbjct: 123 IELRKTAAILD--------------IMKETIINAY------VTKS-HLSREEISALMDTE 161 Query: 212 I-WTGAEAKKVGLI 224 +T +A + G Sbjct: 162 TYFTADQAIEKGFA 175 >gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 207 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 73/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + +++ +E P + +D R Sbjct: 153 AQEILT----------------IKQKLNNLL-----------AEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 185 DNFMSADQAVEYGLVDAV 202 >gi|297587079|ref|ZP_06945724.1| peptidase S14, ClpP [Finegoldia magna ATCC 53516] gi|297575060|gb|EFH93779.1| peptidase S14, ClpP [Finegoldia magna ATCC 53516] Length = 228 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 39/201 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + I G I + E+ R+ + + + V ++SPGG A I+ + + K Sbjct: 17 LYIDGVIAEESWFDDEITPRLFFEELKNKSGDITVWINSPGGDCIAASRIYTMLLEHKGN 76 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A ++ + TSL + + + +V Sbjct: 77 --VAIKIDGLAASAASVIAMAGTEVLMSPTSL------MMIH------------NPLTVA 116 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K +Q D++ + + ++ L DG W Sbjct: 117 IGDSK------------EMQKAMDMLKEVKESIINAYEIKTGLSREEISNLMDGETWFDK 164 Query: 217 -EAKKVGLIDVVGGQEEVWQS 236 +A ++G D G + + Sbjct: 165 NKAIEMGFCD--GTLTDKRKD 183 >gi|42779480|ref|NP_976727.1| ClpP protease family protein [Bacillus cereus ATCC 10987] gi|42735396|gb|AAS39335.1| ClpP protease family protein [Bacillus cereus ATCC 10987] Length = 229 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 43/200 (21%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKV 93 + + G I + E+ +I +D+ + V ++SPGG +A I+ + + Sbjct: 17 LYLNGVISEETWWGDEVTPKI---FKDELLAGTGDITVWINSPGGDVFAAAQIYNMLMEY 73 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V ++ +AASA +I+ A + + S+ L + + Sbjct: 74 TGK--VTVKIDGLAASAASVIAMAGGDVYMSPVSM------LMIH------------NPS 113 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ + + + ++D + + K L D W Sbjct: 114 TIAIGD------------SEEMLRAKALLDEVKESIINAYELKTGLSRTKLSHLMDAESW 161 Query: 214 -TGAEAKKVGLIDVVGGQEE 232 +A ++G D + E Sbjct: 162 MNANKAIELGFADKIMFMES 181 >gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter gracilis RM3268] gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter gracilis RM3268] Length = 194 Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I+D+ ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIYLYINSPGGVVTSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + +P G + Sbjct: 87 -VSTICIGQAASMGAFLLSCGAKGKRYALPNSR------IMIH---QPLGGAQGQATDI- 135 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + M+++++ ++S++ + +D + + Sbjct: 136 -------------EIQAKEILRMKEILN-------GILSQNSGKDLAQVEKDTDRDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 +A + GLID V Sbjct: 176 AEDAVQYGLIDQV 188 >gi|153006163|ref|YP_001380488.1| hypothetical protein Anae109_3319 [Anaeromyxobacter sp. Fw109-5] gi|152029736|gb|ABS27504.1| protein of unknown function DUF114 [Anaeromyxobacter sp. Fw109-5] Length = 278 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 25/184 (13%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 I DS++++ IE D +++ +PGG A I RA + K + V V Sbjct: 67 INDSEDVLRAIE--LTDPEVPLDIVLH--TPGGVVLAALQIARAERDHKGK--VTVIVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 A S G LI+ +++ I+ + +++G + L QYP K V P+ Sbjct: 121 YAMSGGTLIALSADEILMSRHAVLGPVDPQLGQYPAASLL--------KVVSKKPIAEID 172 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AEA 218 + A + + + +S F R VS + +LS G WT +A Sbjct: 173 DQTLVLADVAEKAVNQIRESVQDLFTRSVSAE--KSRELAELLSTG-TWTHDYPITFEQA 229 Query: 219 KKVG 222 +++G Sbjct: 230 QRLG 233 >gi|330446593|ref|ZP_08310245.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490784|dbj|GAA04742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 207 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 74/203 (36%), Gaps = 47/203 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ +E P + +D R Sbjct: 153 AQEILT----------------IKQRLNGLL-----------AEHTGQPLEIIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V + + Sbjct: 185 DNFMSADQAVEYGLVDAVLSKRD 207 >gi|28211967|ref|NP_782911.1| ATP-dependent Clp protease proteolytic subunit [Clostridium tetani E88] gi|28204410|gb|AAO36848.1| ATP-dependent clp protease proteolytic subunit [Clostridium tetani E88] Length = 202 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 41/181 (22%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS +G AI+ +Q +K V T MAAS Sbjct: 52 IVAQLLFLEAEDPDKDIFLYINSPGGSITSGMAIYDTMQYIKPD--VSTICIGMAASMGA 109 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMK-AEPSP 166 +L++ + A S + + + +G+ + +K S Sbjct: 110 FLLAAGAKGKRFALPNSE------IMIHQPLGGFQGQATDIGIHADRIL--KIKQNLNSI 161 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 SE + ++++Q D+ F+ +AK GLID Sbjct: 162 LSEKTGQPLEVIQR--DTERDNFMD-----------------------ANQAKDYGLIDE 196 Query: 227 V 227 V Sbjct: 197 V 197 >gi|57640282|ref|YP_182760.1| membrane-bound serine protease, NfeD-like protein [Thermococcus kodakarensis KOD1] gi|57158606|dbj|BAD84536.1| predicted membrane-bound serine protease, NfeD homolog [Thermococcus kodakarensis KOD1] Length = 447 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 38 VARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 V I G I + I ++ SA ALI+ L++PGG A I IQ + Sbjct: 30 VYVGTIEGTITQYTVDQFESYIRTAEKN-SAEALIIELNTPGGQGDAMMEIVSLIQN--S 86 Query: 96 RKPVITEV---HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 PVI V +AASAG I+ AS++I A + +G+ + Y Sbjct: 87 TVPVIIYVYPRGAIAASAGTYIAMASHLIAMAPGTSIGACEPILGY 132 >gi|16079593|ref|NP_390417.1| membrane bound hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|221310464|ref|ZP_03592311.1| hypothetical protein Bsubs1_13886 [Bacillus subtilis subsp. subtilis str. 168] gi|221314787|ref|ZP_03596592.1| hypothetical protein BsubsN3_13802 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319710|ref|ZP_03601004.1| hypothetical protein BsubsJ_13723 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323987|ref|ZP_03605281.1| hypothetical protein BsubsS_13857 [Bacillus subtilis subsp. subtilis str. SMY] gi|1730993|sp|P54465|YQEZ_BACSU RecName: Full=Uncharacterized protein yqeZ gi|1303816|dbj|BAA12472.1| YqeZ [Bacillus subtilis] gi|2634985|emb|CAB14481.1| putative membrane bound hydrolase [Bacillus subtilis subsp. subtilis str. 168] Length = 437 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Query: 30 HVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + V I + +E + R + ++D A +I+ +++PGG + + Sbjct: 25 NAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDAHADHIILDINTPGGLVKSAIDMAD 84 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 I + + PV V++ A SAG I+ ++ I A +G Sbjct: 85 LITE--SEIPVTAYVNKRALSAGAYIALQADHIYMAPGGKMG 124 >gi|330963905|gb|EGH64165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. actinidiae str. M302091] Length = 381 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 40/214 (18%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G+I + + I+ ++ I DD + ++V+ ++ GG + G AI A+ ++ R Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAI--DDGVSPIVVAFNTIGGDLFDGLAIHNALNRLGER 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + +AASAG + +C ++ +V A ++ L + + + Sbjct: 98 --CTARIDALAASAGSVAACGAHRMVMASNAM------LMIH------------NPWTYT 137 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL-VSESRNIPYDKTLVLSDGRIW-T 214 + + ++ + DV+D + + ++S +I + + + W T Sbjct: 138 AGD------------AEDLRKVADVLDQTLEAIIAAYKAKSPDIDEVELRRMVNAETWLT 185 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 EA +GL D +G EV L V Q R+ Sbjct: 186 APEALALGLADEIGAGVEVKACLGQGAVIQRFRQ 219 >gi|170017407|ref|YP_001728326.1| protease subunit of ATP-dependent Clp protease [Leuconostoc citreum KM20] gi|169804264|gb|ACA82882.1| Protease subunit of ATP-dependent Clp protease [Leuconostoc citreum KM20] Length = 229 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 33/160 (20%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++S GG A I+ A++ + VIT++ A SA +I+ A + + + + Sbjct: 47 INSGGGEVDAANEIYTALRNYPGK--VITQIESSAYSAASIIAMAGDKVQISPVA----- 99 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 L + + + + + + + Sbjct: 100 -QLMIH------------NASTYAGGNHNDLDKTSNALKSTDKAIAKAY----------S 136 Query: 193 VSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQE 231 V R P ++ L L D W +A ++GL+D V E Sbjct: 137 VKTGR--PVEEFLALMDKETWINADDALELGLVDEVMTFE 174 >gi|148245175|ref|YP_001219868.1| ClpP-like phage protease [Clostridium kluyveri DSM 555] gi|219684075|ref|YP_002470457.1| hypothetical protein CKR_P47 [Clostridium kluyveri NBRC 12016] gi|146337055|gb|ABQ23666.1| predicted ClpP-like phage protease [Clostridium kluyveri DSM 555] gi|219570583|dbj|BAH08566.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 255 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 76/208 (36%), Gaps = 37/208 (17%) Query: 27 WSSHVEDNSPHVARIAIRGQI-----EDSQELIERIERISRD-DSATALIVSLSSPGGSA 80 W + + A I I G+I +D+ ++ D + + ++SPGG+ Sbjct: 8 WQMKMSADDDKQADIFIYGEIVSYKWDDTDTTAASFKKDLDDLGDVNTINLHINSPGGNV 67 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + G AI +++ K + V V +AAS +I+ + N I+ + S+ + + Sbjct: 68 FEGVAIGNMLKQHKAQ--VNVYVDALAASIASIIAMSGNTILMPKNSM------MMIHNP 119 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + K F + + + + ++Y L + Sbjct: 120 LS------------IAWGNAKD----FRK-KADDLDKIGLSMQTTY-----LNKAGDKLD 157 Query: 201 YDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + +A GL DVV Sbjct: 158 QDTLQKLMDNDTWLSADDAYSYGLCDVV 185 >gi|153829246|ref|ZP_01981913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae 623-39] gi|148875284|gb|EDL73419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae 623-39] Length = 200 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 34 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 90 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 91 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 144 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + ++ + ++ R+ D Sbjct: 145 AQEILTIKNK----------------LNRLLAEHTGQPIEVIE--RDTDRDN-------- 178 Query: 212 IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 179 FMSADQAVEYGLVDAV 194 >gi|15641924|ref|NP_231556.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674197|ref|YP_001217455.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O395] gi|153824129|ref|ZP_01976796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae B33] gi|153826398|ref|ZP_01979065.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae MZO-2] gi|227082052|ref|YP_002810603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae M66-2] gi|254286858|ref|ZP_04961810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae AM-19226] gi|18203199|sp|Q9KQS6|CLPP_VIBCH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|172047646|sp|A5F6X0|CLPP_VIBC3 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|254763808|sp|C3LNM6|CLPP_VIBCM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|9656458|gb|AAF95070.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126518348|gb|EAZ75571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae B33] gi|146316080|gb|ABQ20619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae O395] gi|149739876|gb|EDM54067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae MZO-2] gi|150423008|gb|EDN14957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae AM-19226] gi|227009940|gb|ACP06152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae M66-2] gi|227013820|gb|ACP10030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio cholerae O395] Length = 200 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 34 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 90 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 91 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 144 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + ++ + ++ R+ D Sbjct: 145 AQEILTIKNK----------------LNRLLAEHTGQPIEVIE--RDTDRDN-------- 178 Query: 212 IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 179 FMSADQAVEYGLVDAV 194 >gi|332981228|ref|YP_004462669.1| hypothetical protein Mahau_0644 [Mahella australiensis 50-1 BON] gi|332698906|gb|AEE95847.1| hypothetical protein Mahau_0644 [Mahella australiensis 50-1 BON] Length = 275 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+ +I I+ D + + L +PGG A A I RA++ K+ V Sbjct: 66 IDDSERVIRAIQ--MTDPDLP-IDLILHTPGGVALAAVQIARALK--KHPGKTTVYVPHY 120 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LI+ A++ IV E S++G + + QYP Sbjct: 121 AMSGGTLIALAADEIVMGEQSVLGPVDPQIGQYP 154 >gi|170086161|ref|XP_001874304.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651856|gb|EDR16096.1| predicted protein [Laccaria bicolor S238N-H82] Length = 243 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I DS ++ ++ + +DS + + ++SPGGS AG AI+ +Q V + Sbjct: 70 VIMLHGTIRDSDSTLIVAQLLFLEAEDSTKPIHLYINSPGGSVTAGLAIYDTMQYVSS-- 127 Query: 98 PVITEVHEMAASAGYLISCASNI 120 P+ T +AAS G L+ A Sbjct: 128 PIHTYSLGLAASMGSLLLAAGEK 150 >gi|71280002|ref|YP_269398.1| hypothetical protein CPS_2684 [Colwellia psychrerythraea 34H] gi|71145742|gb|AAZ26215.1| protein of unknown function [Colwellia psychrerythraea 34H] Length = 454 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 31/227 (13%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERIS 61 +LKKI + L+ S + + V ++I G I S+ L+ I + + Sbjct: 1 MLKKILFLITFILLIQQYGNA-QLSPPLNQSKWTVPVLSIDGAIGPAVSEYLVTEITKAN 59 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCAS 118 D S +I+ L +PGG + + I + I + + P+ V AASAG + A Sbjct: 60 NDSSIPLVIIKLDTPGGLSSSLREINQQI--LNSTIPIACLVYPQGARAASAGTYMLYAC 117 Query: 119 NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMM 178 + A + +G+ + P K SP + +++ Sbjct: 118 HYAAMAPATTLGAATPVSIAPPASNQ-------------GEDKKNKSP----SAMEKKVL 160 Query: 179 QDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLI 224 D + ++R +++ RN L +S+ T EA +I Sbjct: 161 NDAI-----AYIRSLAQLRNRNEQWAELAVSEAATLTAEEALAENVI 202 >gi|332712287|ref|ZP_08432215.1| periplasmic serine protease, ClpP family [Lyngbya majuscula 3L] gi|332349093|gb|EGJ28705.1| periplasmic serine protease, ClpP family [Lyngbya majuscula 3L] Length = 294 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I RA+ +++ V V Sbjct: 70 SIEDSEQVLRAIRLTPPDVPID---LILHTPGGLVLATEQIARAL--IRHPSKVTVFVPH 124 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G +++ AS+ IV +++G Sbjct: 125 YAMSGGTMLALASDEIVMDANAVLG 149 >gi|16331162|ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp. PCC 6803] gi|3023511|sp|P74467|CLPP3_SYNY3 RecName: Full=Probable ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp. PCC 6803] Length = 202 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + + DD + + + ++SPGGS AG AI+ +Q +K VIT +AAS Sbjct: 44 ANRIVAFLLYLDSDDPSKPIYLYINSPGGSVTAGMAIYDTMQYIKAE--VITICVGLAAS 101 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A + + + + + I Sbjct: 102 MGAFLLASGAPGKRLALPHAR------IMIHQPMGGTGRRQATDIDI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A +++ ++++ +K +D + + AEAK+ GLID Sbjct: 143 -----EAREIL-----RIRQQLNEIMAQRTGQTVEKIAKDTDRDYFLSAAEAKEYGLIDK 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|254507754|ref|ZP_05119885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus 16] gi|219549279|gb|EED26273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus 16] Length = 208 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + ++ D+ ++ Sbjct: 153 AQEILT----------------IKQKLNKLLAEHTGQPLEVIER----DTDRDNFMA--- 189 Query: 212 IWTGAEAKKVGLIDVV 227 +A + GL+D V Sbjct: 190 ---AEQAVEYGLVDAV 202 >gi|331084073|ref|ZP_08333180.1| hypothetical protein HMPREF0992_02104 [Lachnospiraceae bacterium 6_1_63FAA] gi|330402435|gb|EGG82005.1| hypothetical protein HMPREF0992_02104 [Lachnospiraceae bacterium 6_1_63FAA] Length = 234 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 55/233 (23%) Query: 37 HVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 H+ ++I G++E + ++ ++ I L++ L++ GG AG Sbjct: 35 HIQLLSIIGEVEGHECLPNNSKTTKYEHVLPKLAMIEDSKETDGLLILLNTVGGDVEAGL 94 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL-----VGS----IGVL 135 AI I + KP ++ V S G ++ +++ ++ V S IGV+ Sbjct: 95 AIAEMIASLS--KPTVSLVLGGGHSIGVPMAVSADYSYIVPSATMVIHPVRSNGMFIGVM 152 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Y ++ D++ + + S S++ ++ Q ++D+S V+ V Sbjct: 153 QTYRNMEKIQDRI---TRFIAS---------HSKMP--QKRIEQLMLDTS--QLVKDV-- 194 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G + G EA K GLID GG + LY L + +K Sbjct: 195 --------------GTMLEGEEAVKEGLIDETGGICQALHKLYELIEKEKAQK 233 >gi|195952582|ref|YP_002120872.1| protein of unknown function DUF114 [Hydrogenobaculum sp. Y04AAS1] gi|195932194|gb|ACG56894.1| protein of unknown function DUF114 [Hydrogenobaculum sp. Y04AAS1] Length = 283 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I D +++ L +PGG A A I A+ K K++ VI + Sbjct: 73 IEDSEQVLRAIRMTPEDMP---IVMILHTPGGLALAASQIASALAKHKSK--VIVIIPHY 127 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ +++ I +++G + + Q P L L V K + E Sbjct: 128 AMSGGTLIALSADEITMDHNAVLGPVDPQIGQMPAAS-ILKVLDVK----KPEDIDDETM 182 Query: 166 PFSEVNPKAVQMMQDVV 182 ++V+ KA++ M+ V Sbjct: 183 IMADVSKKAIEQMKSYV 199 >gi|294783245|ref|ZP_06748569.1| ATP-dependent Clp protease [Fusobacterium sp. 1_1_41FAA] gi|294480123|gb|EFG27900.1| ATP-dependent Clp protease [Fusobacterium sp. 1_1_41FAA] Length = 344 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 78/194 (40%), Gaps = 44/194 (22%) Query: 41 IAIRGQIE---------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I GQI + ++ + +E D + + ++SPGGS G AI+ A++ Sbjct: 16 IQIYGQIGGFSWFDEPVSADQVYKELENFGND--IDTINLYINSPGGSVTEGCAIYSALK 73 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + K K V + +S +I+ A + I + + + + + G + Sbjct: 74 RHKAVKNVY--IDGQCSSIASVIAMAGDKIAMSPVA------TMMIHNPITAL---AGDA 122 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 I+ K++ + +M+D + ++Y V++S ++ ++ L D Sbjct: 123 IELRKTAAILD--------------IMKDTIINAY------VTKS-HLSREEISALMDTE 161 Query: 212 I-WTGAEAKKVGLI 224 +T +A + G Sbjct: 162 TYFTADQAIEKGFA 175 >gi|325914991|ref|ZP_08177323.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria ATCC 35937] gi|325538884|gb|EGD10548.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria ATCC 35937] Length = 233 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 38/198 (19%) Query: 31 VEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA--LIVSLSSPGGSAYAGEAI 86 +E + VA + I G I DS E + +E + + TA + V ++S GG G AI Sbjct: 19 IEARANDVAEVMIYGTIGDSLWSESVSALELAEQINQITASTIHVRINSGGGVVADGIAI 78 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + A+ + K + V AAS LI+ A N +V +SL L + Sbjct: 79 YNALSQHAAHK--VVFVDGQAASIASLIAMAGNEVVMYASSL------LMVHA------- 123 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 ++ + + + ++ A M++ + + + Sbjct: 124 -----PHTIAAGNASSFRQYATALDAHAGAMLEAY------------ATKTGKRSEVEQL 166 Query: 207 LSDGR-IW-TGAEAKKVG 222 L+DG W TGA+A + G Sbjct: 167 LTDGADHWYTGAQAVEFG 184 >gi|332879315|ref|ZP_08447012.1| endopeptidase Clp [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682735|gb|EGJ55635.1| endopeptidase Clp [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 345 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 42/212 (19%) Query: 30 HVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 +++ +S V I + G I D S + + + + + + V ++S GG Y G Sbjct: 6 NIQTDSDGVGTIFLYGDIGDYYDVQSGRVAKELMEAKKVN--RRVNVRINSNGGEVYCGI 63 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI+ A++ K V V +AAS +I+ + ++ + L + Sbjct: 64 AIYNALKNSKAD--VHIYVDGIAASMASVIALCGKPVEMSKYAR------LMLHSVSGGC 115 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 K + ++ ++D + Y + + ++ Sbjct: 116 Y------------GNKKDMQKCI-----EEIESLEDSLGDIY-------ASRLGMTKEEV 151 Query: 205 L-VLSDGR-IW-TGAEAKKVGLIDVVGGQEEV 233 DG W T +EA ++G ID + E V Sbjct: 152 KAAYFDGEDHWLTASEALRLGFIDGIYDAEPV 183 >gi|316936711|gb|ADU60350.1| capsid protein [Wolbachia phage WO] gi|316936713|gb|ADU60351.1| capsid protein [Wolbachia phage WO] Length = 135 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 Query: 227 VGGQEEVWQ 235 V E Sbjct: 62 VTTFFEFIN 70 >gi|46241449|gb|AAS82924.1| capsid protein [Wolbachia phage WO] gi|46241463|gb|AAS82931.1| capsid protein [Wolbachia phage WO] Length = 136 Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 PHEPMTSESLESLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAAEIGLAD 59 Query: 226 V 226 Sbjct: 60 G 60 >gi|257452229|ref|ZP_05617528.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 3_1_5R] gi|257465976|ref|ZP_05630287.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium gonidiaformans ATCC 25563] gi|315917132|ref|ZP_07913372.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium gonidiaformans ATCC 25563] gi|317058772|ref|ZP_07923257.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 3_1_5R] gi|313684448|gb|EFS21283.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 3_1_5R] gi|313691007|gb|EFS27842.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 195 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 34/182 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI--TEVHEMA 107 + L+ ++ + +D +I+ ++SPGGS AG AI+ + V KP I + + A Sbjct: 40 AASLVAQLLYLEAEDPTKDIILYINSPGGSVSAGLAIYDTMNYV---KPDIQTVCIGQAA 96 Query: 108 ASAGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 + +L+S + A E S + + P+ S Sbjct: 97 SMGAFLLSAGTKGKRFALENSR------IMIHQ-------------------PLGGTGSG 131 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLID 225 + + VQ++ + ++ +++++ ++ L ++ + T EA GLID Sbjct: 132 YHQATD--VQIIAKELQATKEKLASIIAKNSGKTTEEVLEDTERDNYLTAEEAVNYGLID 189 Query: 226 VV 227 +V Sbjct: 190 MV 191 >gi|292491118|ref|YP_003526557.1| peptidase S14 ClpP [Nitrosococcus halophilus Nc4] gi|291579713|gb|ADE14170.1| peptidase S14 ClpP [Nitrosococcus halophilus Nc4] Length = 785 Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 42/222 (18%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATALIV--SLSSPGGSAY 81 FS + +D+ A I I G I +E I+ + S A ++ ++S GGS Y Sbjct: 26 FSLRALADDS----AEIYIYGDIGGWDEESIDARRFVQDLASLEARLITARINSIGGSVY 81 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G AI A+ + + V T + +AAS LI+ A A +L L + Sbjct: 82 DGLAIHNALVRHPAQ--VTTTIDGIAASIASLIAMAGEERTMASNAL------LMVH--- 130 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 P+ +G N + + M D++D +E+ Sbjct: 131 APWTLAIG---------------------NSEEFRRMADMLDKHSEAMTAAYAEATGQSA 169 Query: 202 DKTLV-LSDGR--IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + L L+DG +T EA+ +G + VG ++ V + L A+ Sbjct: 170 EDILALLTDGEDHYYTAEEAQALGFVHSVGSEQPVPEDLTAM 211 >gi|50083772|ref|YP_045282.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. ADP1] gi|60389584|sp|Q6FEP8|CLPP_ACIAD RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|49529748|emb|CAG67460.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5) [Acinetobacter sp. ADP1] Length = 201 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYERVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQAAKEYGLVDEV 196 >gi|328950648|ref|YP_004367983.1| protein of unknown function DUF107 [Marinithermus hydrothermalis DSM 14884] gi|328450972|gb|AEB11873.1| protein of unknown function DUF107 [Marinithermus hydrothermalis DSM 14884] Length = 422 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 59/229 (25%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATAL 69 + +TL + F+ I I G+I + + +E+ + + A+ + Sbjct: 2 KQTFAVFITLLGMAFA----------QTYVIPIEGEIGPALADFLEQSLERAEQEGASGV 51 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 ++ + +PGG A + I + P + V A SAG LI+ +++ I S + Sbjct: 52 VLFVDTPGGRVDAAIRMSDTI--LSTPIPTLAVVQN-AFSAGALITLSADQIAMLPGSEI 108 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 G+ + P +P + ++ F Sbjct: 109 GAALPITVLPGTQPQAAD-------------------------------RKIISGLRGKF 137 Query: 190 VRLVSESRNIPYDKTLVL-----------SDGR--IWTGAEAKKVGLID 225 R V+E+R P + + + G +GA+A ++GL D Sbjct: 138 -RAVAEARGRPAELAEAMVDPDIEIEGLAAKGEPLTLSGAKAVELGLAD 185 >gi|33866183|ref|NP_897742.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 8102] gi|67460509|sp|Q7U5Q2|CLPP3_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|33639158|emb|CAE08164.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp. WH 8102] Length = 200 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSE--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + VA S + + + + I+ Sbjct: 102 MGAFLLAAGTKGKRVALPHSR------IMIHQPLGGTSRRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A +++ R +S+ +DK +D + + EAK GLID Sbjct: 143 -----EAREIL-----RMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLSAEEAKDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|313887837|ref|ZP_07821517.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846180|gb|EFR33561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Peptoniphilus harei ACS-146-V-Sch2b] Length = 194 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + ++ ++ + +D + + ++SPGGS AG AI+ + +K Sbjct: 29 IIFLSGEVNDTMADLIVAQLLFLEAEDPNKDIQLYINSPGGSVSAGFAIYDTMNYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A S + + Sbjct: 88 -VSTICIGMAASMGAFLLASGAKGKRFALPNSD------IMIHQ---------------- 124 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + S +N + + ++ ++ ++E +K +D W Sbjct: 125 PSGGAQGQASDIQ-INAEKILKIRHKLNEI-------LAERTGQDLEKIEKDTDRDYWLN 176 Query: 216 AE-AKKVGLIDVV 227 ++ AK GLID V Sbjct: 177 SQEAKDYGLIDKV 189 >gi|228905162|ref|ZP_04069169.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis IBL 4222] gi|228854484|gb|EEM99135.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis IBL 4222] Length = 233 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 37/181 (20%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ + + + DD LIVS++SPGG + G I+ A++ V ++ +AASA Sbjct: 8 KISKELTNANGDD----LIVSINSPGGYVHEGSEIYTALKNYPGN--VEVQIVGLAASAA 61 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +I+ A + + + T+ + + G + + Sbjct: 62 SVIAMAGDKVQISPTA------QIMIH----NASMWNG--------GDHRDMEKAAEMLK 103 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQ 230 ++ V S + L + W G +A + +D + Sbjct: 104 TTDRAIVNAYVIKS------------GKSEKELLNMMAEETWMGPQQALENNFVDEIMFM 151 Query: 231 E 231 + Sbjct: 152 D 152 >gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lyngbya majuscula 3L] gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lyngbya majuscula 3L] Length = 230 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 82/196 (41%), Gaps = 42/196 (21%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS AG AI+ +Q+V+ Sbjct: 53 RIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPGGSVTAGMAIYDTMQQVRPD 112 Query: 97 KPVITEVHEMAAS-AGYLIS-CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T + +AAS +L++ A+ +A S + + + + V I+ Sbjct: 113 --VVTICYGLAASMGAFLLAGGAAGKRMALPNSR------IMIHQPLGGAQGQA-VDIEI 163 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 +A +++ + ++ L++ P ++ ++ Sbjct: 164 ------------------QAREILYHKQTLNQ-------LLANHTGQPVEQIAEDTERDF 198 Query: 213 W-TGAEAKKVGLIDVV 227 + + AEAK GLID V Sbjct: 199 FMSAAEAKDYGLIDQV 214 >gi|296807623|ref|XP_002844228.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma otae CBS 113480] gi|238843711|gb|EEQ33373.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma otae CBS 113480] Length = 238 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 78/193 (40%), Gaps = 34/193 (17%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 62 IVCLNGEVDESLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS-- 119 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + Sbjct: 120 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHS---SI---MIHQ---------------- 157 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + + ++ L + + G Sbjct: 158 PSGGYFGQATDI-AIHAKEILRVRHQLNQIY----KRHLTGKEMTLEEIEKLMERDYFMG 212 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 213 AKEALEMGIVDSI 225 >gi|228922537|ref|ZP_04085838.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837132|gb|EEM82472.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 233 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 37/181 (20%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ + + + DD LIVS++SPGG + G I+ A++ V ++ +AASA Sbjct: 8 KISKELTNANGDD----LIVSINSPGGYVHEGSEIYTALKNYPGN--VEVQIVGLAASAA 61 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +I+ A + + + T+ + + G + + Sbjct: 62 SVIAMAGDKVRISPTA------QIMIH----NASMWNG--------GDHRDMEKAAEMLK 103 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQ 230 ++ V S + L + W G +A + +D + Sbjct: 104 TTDRAIVNAYVIKS------------GKSEKELLNMMAEETWMGPQQALENNFVDEIMFM 151 Query: 231 E 231 + Sbjct: 152 D 152 >gi|268315964|ref|YP_003289683.1| hypothetical protein Rmar_0391 [Rhodothermus marinus DSM 4252] gi|262333498|gb|ACY47295.1| protein of unknown function DUF107 [Rhodothermus marinus DSM 4252] Length = 452 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 26/219 (11%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGS 79 + S ++ + V +A+ G +++ + IER + A A++ + + GG Sbjct: 11 LLALLSTTAIGRASEGPVYVVAVEGMVDNVLVQYIERAIHEAEAADAAAIVFRIDTFGGL 70 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 A + I + I + P + + AASAG LI+ A + IV A + +G+ V+ Sbjct: 71 VAAADQIRQLI--LDTPLPTVAFIDRNAASAGALIAYACDRIVMAPGASMGAATVVEGTT 128 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + +S M+A +E N + ++ + +VD V+ + Sbjct: 129 G-----EAAPDKYQSYMRGLMRAT----AEANGRDPRIAEAMVDP-------DVAIEGLV 172 Query: 200 PYDKTLVLSDGRIWTGAEAKKVGLIDVV-GGQEEVWQSL 237 P K L L + EA ++G+ D + +E Q L Sbjct: 173 PAGKVLTL------SAREALELGVADALAASVDEALQVL 205 >gi|308800514|ref|XP_003075038.1| ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus tauri] gi|119358863|emb|CAL52310.2| ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus tauri] Length = 252 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G ++D ++ ++ + D + + ++SPGGS AG A+F ++ ++ Sbjct: 71 IVRLGGAVDDDGCNLIVAQLLWLDAADPDKDITLYINSPGGSVTAGMAVFDTMRHIRPN- 129 Query: 98 PVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L++ + + S + + + + + Sbjct: 130 -VSTVCVGLAASMGAFLLASGEAGKRYSLPNSR------IMIHQPLGGAQGQAADIEIQA 182 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + K+ + + + + +Q V++ + F Sbjct: 183 NEIM--HHKSTLNGY--LAEFTKKPLQTVMEDTDRDF----------------------F 216 Query: 213 WTGAEAKKVGLIDVV 227 + EA + GLID + Sbjct: 217 MSAQEALEYGLIDSI 231 >gi|213019666|ref|ZP_03335471.1| minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994707|gb|EEB55350.1| minor capsid protein c [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 145 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 13/88 (14%) Query: 31 VEDNSPHVARIAIRGQIE-------------DSQELIERIERISRDDSATALIVSLSSPG 77 V N A IAI G + +++ E IE + +++ + SPG Sbjct: 27 VNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPG 86 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHE 105 G + I + + +K +I ++ Sbjct: 87 GEVNGIFDLADFIYESRAKKRIIAIAND 114 >gi|60389777|sp|Q891J7|CLPP_CLOTE RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp Length = 194 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 41/181 (22%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS +G AI+ +Q +K V T MAAS Sbjct: 44 IVAQLLFLEAEDPDKDIFLYINSPGGSITSGMAIYDTMQYIKPD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMK-AEPSP 166 +L++ + A S + + + +G+ + +K S Sbjct: 102 FLLAAGAKGKRFALPNSE------IMIHQPLGGFQGQATDIGIHADRIL--KIKQNLNSI 153 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 SE + ++++Q D+ F+ +AK GLID Sbjct: 154 LSEKTGQPLEVIQR--DTERDNFMD-----------------------ANQAKDYGLIDE 188 Query: 227 V 227 V Sbjct: 189 V 189 >gi|197105280|ref|YP_002130657.1| ATP-dependent Clp protease, proteolytic subunit [Phenylobacterium zucineum HLK1] gi|196478700|gb|ACG78228.1| ATP-dependent Clp protease, proteolytic subunit [Phenylobacterium zucineum HLK1] Length = 205 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q +K+ Sbjct: 37 IVFLAGPVEDGMASLICAQLLHLEAENPKKEIQMYINSPGGVVTSGLAIYDTMQYIKS-- 94 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PVIT MAAS G + A +A S + + Sbjct: 95 PVITLCLGMAASMGSFLLMAGEKGQRIALPNSR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + + + + + ++ Y ++ P + D + T Sbjct: 133 PSGGYSGKATDIQR-HAEDIIKTKRRLNEIY-------AKHTGQPIEAVEETLDRDFFMT 184 Query: 215 GAEAKKVGLIDVV 227 EAK GL+D V Sbjct: 185 AQEAKDWGLVDHV 197 >gi|321312023|ref|YP_004204310.1| putative membrane bound hydrolase [Bacillus subtilis BSn5] gi|320018297|gb|ADV93283.1| putative membrane bound hydrolase [Bacillus subtilis BSn5] Length = 437 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 38 VARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 V I + +E + R + ++D A +I+ +++PGG + + I + + Sbjct: 33 VYVIPVEKNVEQGLASFLSRSLQDAKDAHADHIILDINTPGGLVKSAIDMADLITE--SE 90 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 PV V++ A SAG I+ ++ I A +G Sbjct: 91 IPVTAYVNKRALSAGAYIALQADHIYMAPGGKMG 124 >gi|258621302|ref|ZP_05716336.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus VM573] gi|258625374|ref|ZP_05720271.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus VM603] gi|262166052|ref|ZP_06033789.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus VM223] gi|262171083|ref|ZP_06038761.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus MB-451] gi|258582365|gb|EEW07217.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus VM603] gi|258586690|gb|EEW11405.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus VM573] gi|261892159|gb|EEY38145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus MB-451] gi|262025768|gb|EEY44436.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus VM223] Length = 208 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 72/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K + + K RL++E P + +D R Sbjct: 153 AKEILTIKNKLN---------------------------RLLAEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 185 DNFMSADQAVEYGLVDAV 202 >gi|226953943|ref|ZP_03824407.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. ATCC 27244] gi|294651552|ref|ZP_06728861.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter haemolyticus ATCC 19194] gi|226835297|gb|EEH67680.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. ATCC 27244] gi|292822575|gb|EFF81469.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter haemolyticus ATCC 19194] Length = 201 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPEKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYETVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQAAKEYGLVDQV 196 >gi|169830543|ref|YP_001716525.1| hypothetical protein Daud_0335 [Candidatus Desulforudis audaxviator MP104C] gi|169637387|gb|ACA58893.1| protein of unknown function DUF114 [Candidatus Desulforudis audaxviator MP104C] Length = 281 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +EDS+++ + I + + L +PGG A E I RA+ +++ V V Sbjct: 69 VEDSEQI---LRAIRLTPPHLPIDLVLHTPGGLVLASEQIARAL--LRHPAKVTVLVPHY 123 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G +I+ +++ I+ E +++G Sbjct: 124 AMSGGTMIALSADEIIMDENAVLG 147 >gi|317132346|ref|YP_004091660.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3] gi|315470325|gb|ADU26929.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3] Length = 319 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 47/201 (23%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I + D L++ L++ GG AG AI I +K KP ++ V S Sbjct: 90 EHVIPQIVAVEEDPRIEGLLIVLNTVGGDVEAGLAIAELISGMK--KPTVSLVLGGGHSI 147 Query: 111 GYLISCASNIIVAAETS-----------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 G ++ ++ A T+ +V +GV Y D++G Sbjct: 148 GVPLAICASESFIAPTATMTIHPVRMNGIV--VGVPQTLSYFDKMQDRIG---------K 196 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 A+ S + + ++++ + + + G + G EA Sbjct: 197 FVAQNSHIAP------ERFKELMMHTGELVLDV-----------------GTVLEGEEAV 233 Query: 220 KVGLIDVVGGQEEVWQSLYAL 240 + GLID GG + LY + Sbjct: 234 REGLIDHTGGLSDAISCLYRM 254 >gi|316936709|gb|ADU60349.1| capsid protein [Wolbachia phage WO] Length = 137 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 MEPMTSESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 61 >gi|85713354|ref|ZP_01044368.1| Protease subunit of ATP-dependent Clp protease [Idiomarina baltica OS145] gi|85692821|gb|EAQ30805.1| Protease subunit of ATP-dependent Clp protease [Idiomarina baltica OS145] Length = 205 Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I GQ+ED + ++ ++ + D+ + + ++SPGG AG AI+ ++ +K Sbjct: 38 VIFCCGQVEDHMANLIVAQLLFLESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + Sbjct: 97 -VSTVCMGQAASMGAFLLAGGAQGKRYCLPNSRV------MIHQPLGGFQGQASDFEIHA 149 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + + + ++ + V+ R+ D Sbjct: 150 KQIL----------------DLKERLNRMLAENTGQDYEKVA--RDTDRD--------HF 183 Query: 213 WTGAEAKKVGLIDVV 227 T EA GL+D + Sbjct: 184 LTAPEAVDYGLVDGI 198 >gi|54309798|ref|YP_130818.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium profundum SS9] gi|46914236|emb|CAG21016.1| putative gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio vulnificus CMCP6] [Photobacterium profundum SS9] Length = 207 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 41/200 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P + + + + +L++ + S V + + F + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQA------ 146 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--I 212 +Q+ + + H L+++ P + +D R Sbjct: 147 ------------------SDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTD-RDNF 187 Query: 213 WTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V Q + Sbjct: 188 MSADQAVEYGLVDSVLTQRD 207 >gi|150401562|ref|YP_001325328.1| hypothetical protein Maeo_1139 [Methanococcus aeolicus Nankai-3] gi|150014265|gb|ABR56716.1| protein of unknown function DUF114 [Methanococcus aeolicus Nankai-3] Length = 272 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +EDS+E++ I S D + L +PGG A E I A+++ K + VI + Sbjct: 67 MEDSEEVLRAIRMTSDDVPID---LILHTPGGLVLASEQIAMALKEHKAKTTVI--IPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYP 139 A S G LIS A + I+ + +++G + + QYP Sbjct: 122 AMSGGSLISLAVDEIIMDKNAVMGPVDPQIGQYP 155 >gi|260587637|ref|ZP_05853550.1| translocation-enhancing protein TepA [Blautia hansenii DSM 20583] gi|260541902|gb|EEX22471.1| translocation-enhancing protein TepA [Blautia hansenii DSM 20583] Length = 256 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 55/233 (23%) Query: 37 HVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 H+ ++I G++E + ++ ++ I L++ L++ GG AG Sbjct: 57 HIQLLSIIGEVEGHECLPNNSKTTKYEHVLPKLAMIEDSKETDGLLILLNTVGGDVEAGL 116 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL-----VGS----IGVL 135 AI I + KP ++ V S G ++ +++ ++ V S IGV+ Sbjct: 117 AIAEMIASLS--KPTVSLVLGGGHSIGVPMAVSADYSYIVPSATMVIHPVRSNGMFIGVM 174 Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSE 195 Y ++ D++ + + S S++ ++ Q ++D+S V+ V Sbjct: 175 QTYRNMEKIQDRI---TRFIAS---------HSKMP--QKRIEQLMLDTS--QLVKDV-- 216 Query: 196 SRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 G + G EA K GLID GG + LY L + +K Sbjct: 217 --------------GTMLEGEEAVKEGLIDETGGICQALHKLYELIEKEKAQK 255 >gi|167465665|ref|ZP_02330754.1| serine protease (phage related-protein, ClpP family) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 238 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 73/209 (34%), Gaps = 47/209 (22%) Query: 31 VEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + + A I I G I + E ++R+ + + ++SPGGS + Sbjct: 1 MSADGSSSADIFIYGDIVTYQWDEVDTSATSFKEDLDRLGDLSTIN---LYINSPGGSVF 57 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G AI +++ K V V +AAS +I+ A + I + S+ L + Sbjct: 58 EGIAIHNMLKRHKAN--VHVHVDALAASIASVIAMAGDTIYMPKNSM------LMIH--- 106 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH--WFVRLVSESRNI 199 + N ++ + D +D + V L + Sbjct: 107 ---------NPWIFAWG------------NASEMRKIADDLDRIGNSSKQVYLQKAGDKL 145 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +K + D W + EA + GL DVV Sbjct: 146 SDEKLQDMLDAETWLSADEAFEYGLCDVV 174 >gi|262374981|ref|ZP_06068215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter lwoffii SH145] gi|262309994|gb|EEY91123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter lwoffii SH145] Length = 201 Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFMTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGTKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYEKVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T +AK+ GL+D V Sbjct: 182 MTAQQAKEYGLVDEV 196 >gi|262174040|ref|ZP_06041716.1| prophage Clp protease-like protein [Vibrio mimicus MB-451] gi|261890220|gb|EEY36208.1| prophage Clp protease-like protein [Vibrio mimicus MB-451] Length = 677 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 37/183 (20%) Query: 58 ERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP--VITEVHEMAASAGYLIS 115 + +++ + SPGG + G I+ + N+ P + + +AAS +I+ Sbjct: 44 NDLKSRGDVRNIVLRIHSPGGDVFEGMVIYNLL----NQHPAYITVYIDGLAASMASVIA 99 Query: 116 CASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 ++++ + + + ++ Sbjct: 100 MVGDVVIIPMNA------AIMIH------------KPWGIQGGDADDM------------ 129 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVW 234 + D++D V ++ ++ L D W G EA ++G D+V + Sbjct: 130 RRYADLLDQVEDSLVSAYTKKTGKTVEEIKQLLDAETWMFGQEAVELGFADMVAEPLQAA 189 Query: 235 QSL 237 SL Sbjct: 190 ASL 192 >gi|257467083|ref|ZP_05631394.1| prophage LambdaBa02, Clp protease family protein [Fusobacterium gonidiaformans ATCC 25563] gi|315918215|ref|ZP_07914455.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] gi|313692090|gb|EFS28925.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] Length = 371 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 44/240 (18%) Query: 30 HVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGS 79 + + + +A I I G I S + ++ + + + + + ++S GG Sbjct: 9 EINNLTEGIAEIRIYGTITKWAWEEVGEVSSHSFAKELKNL---KNISKINLRVNSGGGD 65 Query: 80 AYAGEAIFRAIQKVKNRKPV--ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + AIF ++ V I + +AASA + ++ ++ VG + Sbjct: 66 VFEANAIFNLLKSYAKENNVEIIGYIDGLAASAASFLVLCAHKVIM----GVGCL--FMI 119 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + + +K + +++ + Y +L + Sbjct: 120 H------------NPWTYTKGNVKELG-----QTIDFLNKIKESILDIYETKTKLTRQEI 162 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKN 257 + D+ ++ +EA + G +D + E+V ++ + ++ + KN Sbjct: 163 SQKMDEEKW------FSASEALESGFVDEMSEMEDVENNILNAAGENFVQNFINSEILKN 216 >gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus hominis SK119] gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus hominis subsp. hominis C80] gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus hominis SK119] gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus hominis subsp. hominis C80] Length = 195 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + DS + + ++SPGGS AG AI+ IQ +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGTKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + + R+++E + +D R Sbjct: 134 -----------------TEIEIAANHILKTREKLNRILAERTGQNIETIQKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 T EAK+ GLID V E+ Sbjct: 176 TADEAKEYGLIDHVMQPED 194 >gi|303316037|ref|XP_003068023.1| ATP-dependent Clp protease proteolytic subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107699|gb|EER25878.1| ATP-dependent Clp protease proteolytic subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|320032384|gb|EFW14337.1| ATP-dependent Clp protease [Coccidioides posadasii str. Silveira] Length = 237 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 35/197 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 62 IVCLNGEVDETVSASIVAQLLFLEADNPEKQISLYINSPGGSVTAGLAIYDTMTYIQS-- 119 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C S V + Sbjct: 120 PVSTICVGQAASMGSLLLCGGEPGKRFCLPHSSV------MVHQ---------------- 157 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + ++ ++ L + + G Sbjct: 158 PSGGYFGQATDI-AIHAKEILRVRKQLNEIYRRHLTK-----DMSLEEIEKLMERDYFMG 211 Query: 216 -AEAKKVGLIDVVGGQE 231 EA +G++D + + Sbjct: 212 AKEALDMGIVDGIMDRR 228 >gi|302404698|ref|XP_003000186.1| ATP-dependent Clp protease proteolytic subunit [Verticillium albo-atrum VaMs.102] gi|261360843|gb|EEY23271.1| ATP-dependent Clp protease proteolytic subunit [Verticillium albo-atrum VaMs.102] Length = 238 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 83/197 (42%), Gaps = 28/197 (14%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D S ++ ++ + D+ A+ + ++SPGGS +G AI+ + +K+ Sbjct: 51 IICLNGAIDDTVSASIVAQLLWLESDNPDKAITLYINSPGGSVTSGLAIYDTMTYIKS-- 108 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A+S G L+ + A S S+ + + + + + Sbjct: 109 PVSTVCLGAASSMGALLLTGGEAGKRYALPHS---SVMIHQPLGGTQGQASDILIYAHQI 165 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K ++M+ +++++ ++E ++ ++ L T Sbjct: 166 QRVRTKLN------------EIMRRHLNAAFGRDRYSLAEVNDM-MERDKYL------TP 206 Query: 216 AEAKKVGLIDVVGGQEE 232 EAK++G+ID + + Sbjct: 207 EEAKEMGVIDEILTRRT 223 >gi|317128309|ref|YP_004094591.1| hypothetical protein Bcell_1597 [Bacillus cellulosilyticus DSM 2522] gi|315473257|gb|ADU29860.1| protein of unknown function DUF107 [Bacillus cellulosilyticus DSM 2522] Length = 444 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 6/139 (4%) Query: 5 LKKIKTRYV-MLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERIS 61 +K+I+ + ++ L ++ + + + + V I + ++E L I Sbjct: 1 MKRIRLIFFSLMMLFSIGLSLVPIQAQGDGSDKLVYYIPVEQEVERGLVAFLQRSINTAL 60 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 D A ++ +++PGG A I I+ P V + A SAG IS ++ I Sbjct: 61 ED-GADHIVFEINTPGGLVAAANEIAALIENTPT--PTTAFVIDEAMSAGAYISLKADQI 117 Query: 122 VAAETSLVGSIGVLFQYPY 140 V + +G+ V+ Sbjct: 118 VMVPGARMGAAQVISGGDG 136 >gi|302865150|ref|YP_003833787.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] gi|302568009|gb|ADL44211.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] Length = 196 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 72/192 (37%), Gaps = 35/192 (18%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + ++ +I ++ +D+ + + ++SPGGS AG A++ ++ VKN V T MA Sbjct: 37 ASANQICAQILLLAAEDAERDIFLYINSPGGSVSAGMAVYDTMRYVKND--VATLALGMA 94 Query: 108 ASAGYLISC--ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 S G + C A+ A S + + P Sbjct: 95 GSMGQFLLCAGAAGKRFALPHSR------IMMHQ-------------------PSGGMGG 129 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLI 224 +++ +A M+ L+++ ++ R +T +A++ GL+ Sbjct: 130 TAADITIQAENML-----HVKRTMQELIAQHSGRTLEEIQRDWDRDRWFTAEQAREYGLV 184 Query: 225 DVVGGQEEVWQS 236 D V + + + Sbjct: 185 DQVLTRVDQLAA 196 >gi|261253459|ref|ZP_05946032.1| ATP-dependent Clp protease proteolytic subunit [Vibrio orientalis CIP 102891] gi|260936850|gb|EEX92839.1| ATP-dependent Clp protease proteolytic subunit [Vibrio orientalis CIP 102891] Length = 208 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + ++ D+ ++ Sbjct: 153 AQEILT----------------IKQKLNKLLAEHTGQPLEVIER----DTDRDNFMA--- 189 Query: 212 IWTGAEAKKVGLIDVV 227 +A + GL+D V Sbjct: 190 ---ADQAVEYGLVDAV 202 >gi|256843130|ref|ZP_05548618.1| ATP-dependent Clp protease, proteolytic subunit [Lactobacillus crispatus 125-2-CHN] gi|256614550|gb|EEU19751.1| ATP-dependent Clp protease, proteolytic subunit [Lactobacillus crispatus 125-2-CHN] Length = 239 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 41/238 (17%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 Q + + +++ D+ + + ++S GG +A I+ I + + V + MAA Sbjct: 31 SPQMVKDSLDKAQGDE----VELDIASYGGDVFAASEIYSMINQYSGK--VTGVIQGMAA 84 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA +I+ A + +V + G + + + + Sbjct: 85 SAATIIAEACDHLVISPA------GQMMIH------------KASTAGAGNSDDFTHTAG 126 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +N + + + ++ L L + T +A + G D + Sbjct: 127 VLNTTDRTIAGIYQNRT------------GKSEEEVLNLMKQETYLTAKDAVEQGFADEI 174 Query: 228 GGQEE----VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQ 281 + + V L+ + +I+K + + D K +L + + K Sbjct: 175 MKKSDKVPQVVNGLHEIPSKDAIKKFMNLIKNQKSTVSDSKRSENDALFNAKLAIFKG 232 >gi|160873909|ref|YP_001553225.1| peptidase S14 ClpP [Shewanella baltica OS195] gi|160859431|gb|ABX47965.1| peptidase S14 ClpP [Shewanella baltica OS195] gi|315266141|gb|ADT92994.1| peptidase S14 ClpP [Shewanella baltica OS678] Length = 668 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 85/246 (34%), Gaps = 42/246 (17%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q+ ++ + + + TA + SPGG + G AI+ I+ K + Sbjct: 33 EIGGWGISAQQFARDLQALGKVGTITA---RIHSPGGDVFEGMAIYNMIKGHPAHK--VC 87 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +I+ A + ++ E ++ + + KP+ LG Sbjct: 88 YIDGLAASMASVIAMAFDEVIMPENAM------MMVH---KPWGGTLG------------ 126 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + + ++ D++D V + D+ L W TG EA + Sbjct: 127 ---------DAEDMRKYADLLDKVEGNLVSAYQHKTGLSEDELHALLAAETWLTGREAVE 177 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMK 280 G + Q +L + ++ + F N + + L+ P Sbjct: 178 KGFA---NTLTDPLQMAASL-NSKRLKDFTNMPEALKNLFAPQGNSAPNPLVP--APAAP 231 Query: 281 QTKVQG 286 ++ Sbjct: 232 NAQLPA 237 >gi|167646810|ref|YP_001684473.1| ATP-dependent Clp protease proteolytic subunit [Caulobacter sp. K31] gi|189082451|sp|B0SZQ2|CLPP_CAUSK RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|167349240|gb|ABZ71975.1| Endopeptidase Clp [Caulobacter sp. K31] Length = 208 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 39/205 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 37 IIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKS-- 94 Query: 98 PVITEVHEMAASAGYLI---SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 PV T MAAS G L+ + I A + + + Sbjct: 95 PVSTVCMGMAASMGSLLLQAGAPGHRI-ALPNAR------IMVHQ--------------- 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 S + + S E + + + + ++ Y + Y++ D + Sbjct: 133 -PSGGFRGQASDI-ERHAEDIIKTKRRLNEIY-------VKHTGRTYEEVEKTLDRDHFM 183 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLY 238 + EAK GLID + + Sbjct: 184 SAEEAKAWGLIDHINESRDEADEKA 208 >gi|78185116|ref|YP_377551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CC9902] gi|124013823|sp|Q3AVC3|CLPP3_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|78169410|gb|ABB26507.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus sp. CC9902] Length = 200 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSE--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + VA S + ++ Q + I++ + MK + Sbjct: 102 MGAFLLAAGTKGKRVALPHSRI----MIHQPLGGTSRRQASDIEIEAREILRMKDMLNHS 157 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++++ + + ++ D Y + EA GLID Sbjct: 158 LADMSGQTFEKIEKDTDRDY-------------------------FLSAEEAMAYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|225572062|ref|ZP_03780926.1| hypothetical protein RUMHYD_00356 [Blautia hydrogenotrophica DSM 10507] gi|225040497|gb|EEG50743.1| hypothetical protein RUMHYD_00356 [Blautia hydrogenotrophica DSM 10507] Length = 248 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 83/209 (39%), Gaps = 35/209 (16%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I D + L+V L++ GG AG AI I + P ++ V S Sbjct: 62 EHVLPKLAMIEDDQNVDGLLVLLNTVGGDVEAGLAIAEMIASLS--VPTVSLVLGGGHSI 119 Query: 111 GYLISCASNIIVAAETSL-----VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 G ++ +++ ++ V S G+ ++K+ I S + Sbjct: 120 GVPMAVSADYSFVVPSATMVIHPVRSNGMFIGVAQTYRNMEKIQDRITSFIAG------- 172 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 S + + ++ + ++D+S V+ V G + G +A + GLID Sbjct: 173 -HSHITQQRLEEL--MLDTS--QLVKDV----------------GTMLEGEDAVREGLID 211 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNP 254 VGG +E L+ + + +K + N Sbjct: 212 EVGGIKEALAKLHQMIGENGQKKTVERNK 240 >gi|60389653|sp|Q6LNW0|CLPP_PHOPR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp Length = 199 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 41/200 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 34 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 90 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P + + + + +L++ + S V + + F + Sbjct: 91 PNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQA------ 138 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--I 212 +Q+ + + H L+++ P + +D R Sbjct: 139 ------------------SDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTD-RDNF 179 Query: 213 WTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V Q + Sbjct: 180 MSADQAVEYGLVDSVLTQRD 199 >gi|332799236|ref|YP_004460735.1| peptidase S14 ClpP [Tepidanaerobacter sp. Re1] gi|332696971|gb|AEE91428.1| peptidase S14 ClpP [Tepidanaerobacter sp. Re1] Length = 240 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 82/221 (37%), Gaps = 55/221 (24%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I GQIE + +I ++ I ++ L+V L++ GG AG AI Sbjct: 48 ITIVGQIEGHIVLPPQNKTTKYEHIIPQLIAIEQNPKIKGLLVILNTVGGDVEAGLAIAE 107 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + KP ++ V S G I+ AS+ AET+ + +P Sbjct: 108 MIVGM--TKPTVSLVLGGGHSIGVPIAVASDYSFIAETA------TMTIHP--------- 150 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL- 207 + + + + + MQD V ++ + E I + L Sbjct: 151 -IRLTGLVIGV---------PQTYEYLDKMQDRV-------IKFIVEHSKIGEESFRELM 193 Query: 208 -SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 S G+ + G++A K GLID VGG + L + Sbjct: 194 FSTGKLARDIGTVLVGSDAVKCGLIDEVGGIGAAIKKLEEI 234 >gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfotomaculum acetoxidans DSM 771] gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfotomaculum acetoxidans DSM 771] Length = 194 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G IED + +I ++ + +D + + ++SPGG AG AI+ +Q +K Sbjct: 30 IIFIGGPIEDYTANLIIAQLLFLEAEDPEKDIHLYINSPGGVVTAGMAIYDTMQYIKP-- 87 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 PV T AAS +L++ + A + + + ++ +G+ Sbjct: 88 PVSTICLGQAASMGSFLLAAGAPGKRFALPYAR------IMIHQPSGGMQGQATDIGIH- 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + M+++++ +L+S+ P DK S+ Sbjct: 141 -------------------AKEILRMKEILN-------KLLSKHTKQPLDKITRDSERDF 174 Query: 213 W-TGAEAKKVGLIDVV 227 + + +AK+ G+ID + Sbjct: 175 FMSAEDAKEYGIIDQI 190 >gi|317970581|ref|ZP_07971971.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CB0205] Length = 200 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 40/191 (20%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 + I +S L+ ++ + DD++ + + ++SPGGS AG AI+ IQ VK+ V+T Sbjct: 38 EVNDAIANS--LVAQMLYLDSDDNSKPIYLYINSPGGSVTAGLAIYDTIQYVKSD--VVT 93 Query: 102 EVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKL--GVSIKSVKS 157 +AAS +L+ + +A S + + + + + I++ + Sbjct: 94 ICVGLAASMGAFLLGAGTKGKRLALPHSR------IMIHQPLGGTSQRQASDIEIEAREI 147 Query: 158 SPMKAEP-SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 MK + + + + V+ ++ D Y + Sbjct: 148 LRMKDMLNNSMAGMTGQPVEKIEKDTDRDY-------------------------FMSAE 182 Query: 217 EAKKVGLIDVV 227 EA GLID V Sbjct: 183 EAMNYGLIDRV 193 >gi|291484986|dbj|BAI86061.1| hypothetical protein BSNT_03783 [Bacillus subtilis subsp. natto BEST195] Length = 437 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 30 HVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + V I + +E + R + ++D A +I+ +++PGG + + Sbjct: 25 NAKAEKQTVYVIPVEKNVEQGLVSFLSRSLQDAKDAHADHIILDINTPGGLVKSAIDMAD 84 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 I + PV V++ A SAG I+ ++ I A +G Sbjct: 85 LI--TDSEIPVTAYVNKRALSAGAYIALQADHIYMAPGGKMG 124 >gi|134299785|ref|YP_001113281.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1] gi|134052485|gb|ABO50456.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfotomaculum reducens MI-1] Length = 276 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 55/238 (23%) Query: 32 EDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGS 79 E+ ++ + I GQIE + +I ++ I +DD+ +++ L++ GG Sbjct: 68 ENIKSNIHCVTIVGQIEGHIMLPAQNKTTKYEHIIPQLVGIEQDDNVEGVLLVLNTVGGD 127 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 AG AI + + KP +T V S G I+ +S A T+ + +P Sbjct: 128 VEAGLAIAEVVATM--TKPTVTLVLGGGHSIGVPIAVSSKYSYIAPTAS------MTIHP 179 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + G+ I + MQD V +R V+E + Sbjct: 180 -----IRLNGLVIGV--------------PQTYDYLDKMQDRV-------IRFVTEHSRV 213 Query: 200 PYDKTL-------VLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 +K L+ G + G +A + GLID VGG + L L +Q ++ Sbjct: 214 TEEKFRQLMFKTGELARDIGTVVIGKDAVETGLIDAVGGVGQAMCKLKELIEEQKGKE 271 >gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor obsidiansis OB47] gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor obsidiansis OB47] Length = 195 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 30 IVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGFAIYDTMQYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 V T MAAS +L++ + A S + G GV Q +K Sbjct: 89 -VSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLG--GVRGQATDIK------- 138 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + +++ ++ +SE P + +D Sbjct: 139 IHAEWIL--------------------KIKNRINKI-------LSERTGQPIEVIERDTD 171 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + T EA K G+ID V Sbjct: 172 RDFFMTAEEALKYGIIDRV 190 >gi|315501699|ref|YP_004080586.1| endopeptidase clp [Micromonospora sp. L5] gi|315408318|gb|ADU06435.1| Endopeptidase Clp [Micromonospora sp. L5] Length = 196 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + ++ +I ++ +D+ + + ++SPGGS AG A++ ++ VKN V T MA Sbjct: 37 ASANQICAQILLLAAEDAERDIFLYINSPGGSVSAGMAVYDTMRYVKND--VATLALGMA 94 Query: 108 ASAGYLISC--ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 S G + C A+ A S + + P Sbjct: 95 GSMGQFLLCAGAAGKRFALPHSR------IMMHQ-------------------PSGGMGG 129 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLI 224 +++ +A M+ L+++ ++ R +T +A++ GL+ Sbjct: 130 TAADITIQAENML-----HVKRTMQELIAQHSGRTLEEIQRDWDRDRWFTAEQAREYGLV 184 Query: 225 DVV 227 D V Sbjct: 185 DQV 187 >gi|187935559|ref|YP_001887076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum B str. Eklund 17B] gi|226706444|sp|B2TPB9|CLPP_CLOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|187723712|gb|ACD24933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum B str. Eklund 17B] Length = 199 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 75/201 (37%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L+S +N A + + + + + + Sbjct: 88 -VSTICVGMAASMGAFLLSSGANGKRYALPNAE------IMIHQPLGGFQGQATDIQIHA 140 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K + SE + +++++ V+ Sbjct: 141 NRIL--KIKESLNKILSENTNQPLEVIEADVERDN------------------------- 173 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 T EAK GL+D V + E Sbjct: 174 FMTADEAKTYGLVDKVITKNE 194 >gi|241203529|ref|YP_002974625.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857419|gb|ACS55086.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 203 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 35/202 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEAENPKKPINLYINSPGGVVTSGLAMYDTMRFIRA-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEAGGRAALPNA---SILIHQPSGGFQGQASDMMIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERGMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 EA + GLID + E SL Sbjct: 182 EEALEWGLIDRILTVREDTASL 203 >gi|325478747|gb|EGC81858.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Anaerococcus prevotii ACS-065-V-Col13] Length = 228 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 39/201 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + I G I + E+ R+ + + + V ++SPGG A I+ + + K Sbjct: 17 LYIDGVIAEESWFDDEITPRLFFEELKNKSGDITVWINSPGGDCIAASRIYTMLLEHKGN 76 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V ++ +AASA +I+ A ++ + TSL + + + +V Sbjct: 77 --VTIKIDGLAASAASVIAMAGTEVLMSPTSL------MMIH------------NPLTVA 116 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 K +Q D++ + + ++ L DG W Sbjct: 117 IGDSK------------EMQKAIDMLKEVKESIINAYEIKTGLSREEISNLMDGETWFDK 164 Query: 217 -EAKKVGLIDVVGGQEEVWQS 236 +A ++G D G + + Sbjct: 165 NKAIEMGFCD--GTLTDKRKD 183 >gi|297583414|ref|YP_003699194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus selenitireducens MLS10] gi|297141871|gb|ADH98628.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus selenitireducens MLS10] Length = 197 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 73/197 (37%), Gaps = 41/197 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ DD + + ++SPGGS AG AI+ +Q +K + Sbjct: 29 IIMLGTPIDDNVANSIVAQLLFLAADDPDKDISLYINSPGGSITAGMAIYDTMQFIKPK- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS G + A A S V + + + + Sbjct: 88 -VQTICIGMAASMGAFLLTAGEPGKRYALPNSEV------MIHQPLGGAQGQASDIEIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + + + + ++ + + + D+ L Sbjct: 141 KRIV----------------EMKEKLNQILAERTGQDIEQIRK----DTDRDNFL----- 175 Query: 213 WTGAEAKKVGLIDVVGG 229 + A+AK+ GLID V Sbjct: 176 -SAAQAKEYGLIDEVMD 191 >gi|119177332|ref|XP_001240455.1| ATP-dependent Clp protease proteolytic subunit [Coccidioides immitis RS] Length = 237 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 35/197 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 62 IVCLNGEVDETVSASIVAQLLFLEADNPEKQISLYINSPGGSVTAGLAIYDTMTYIQS-- 119 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C S V + Sbjct: 120 PVSTICIGQAASMGSLLLCGGEPGKRFCLPHSSV------MVHQ---------------- 157 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + ++ ++ L + + G Sbjct: 158 PSGGYFGQATDI-AIHAKEILRVRKQLNEIYRRHLTK-----DMSLEEIEKLMERDYFMG 211 Query: 216 -AEAKKVGLIDVVGGQE 231 EA +G++D + + Sbjct: 212 AKEALDMGIVDGIMDRR 228 >gi|257458199|ref|ZP_05623353.1| Clp protease [Treponema vincentii ATCC 35580] gi|257444493|gb|EEV19582.1| Clp protease [Treponema vincentii ATCC 35580] Length = 202 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 39/190 (20%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ ++++I ++ + D ++ + V + SPGG AG AIF I+ +K P Sbjct: 33 IILSGEVNKELAEKVIRQLLILEADSASKPIYVYIDSPGGDVDAGFAIFDMIRFIKP--P 90 Query: 99 VITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL-GVSIKSV 155 V T + ASAG LI + N + S + + L + GV+ Sbjct: 91 VYTVGMGLVASAGALILLAAPKNRRLGLPNS----------HYLIHQPLSGIKGVATDI- 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E++ K ++ ++ +++ L++E +D W + Sbjct: 140 -------------EIHAKEIEKIRAKINA-------LIAEETGKDVADVAKDTDRDYWLS 179 Query: 215 GAEAKKVGLI 224 EA GLI Sbjct: 180 ADEAVNYGLI 189 >gi|167521860|ref|XP_001745268.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776226|gb|EDQ89846.1| predicted protein [Monosiga brevicollis MX1] Length = 209 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G ++D+ ++ ++ + ++ + V ++SPGGS AG AI+ +Q ++ R Sbjct: 24 IVCLMGPVDDAMASTIVAQLLHLESENPDEPVSVYINSPGGSVTAGLAIYDTLQYIRPR- 82 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T A S G L+ A + A S I V + + + Sbjct: 83 -ITTVCSGQACSMGSLLLTAGSPGHRYALPNSR---IMVHQPSGGARGQASDIAIH---- 134 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWT 214 + + ++ +++ Y + YD+ L R + Sbjct: 135 ----------------AEEILKLKTTINNLY-------AHHTGRTYDEIEAALDRDRFMS 171 Query: 215 GAEAKKVGLIDVV 227 EAK GLID + Sbjct: 172 AQEAKDFGLIDQI 184 >gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium perfringens str. 13] gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium perfringens ATCC 13124] gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium perfringens SM101] gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens E str. JGS1987] gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens B str. ATCC 3626] gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens CPE str. F4969] gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens NCTC 8239] gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens C str. JGS1495] gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium perfringens D str. JGS1721] gi|21759067|sp|Q8XKK1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|123146116|sp|Q0ST53|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|123148745|sp|Q0TQK2|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium perfringens str. 13] gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens ATCC 13124] gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens SM101] gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens C str. JGS1495] gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens E str. JGS1987] gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens B str. ATCC 3626] gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens CPE str. F4969] gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium perfringens D str. JGS1721] gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium perfringens NCTC 8239] Length = 194 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + ++ ++ + +D + + ++SPGGS +G AI+ +Q +K Sbjct: 30 IIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L+S + A + + + + + + Sbjct: 89 -VSTICIGMAASMGAFLLSSGAKGKRFALPNAE------IMIHQPLGGFQGQATDIDIHA 141 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K + +K + + SE + ++ ++ V+ Y F+ Sbjct: 142 KRIL--KIKDKLNQILSENTNQPLEKIKVDVERDY--FME-------------------- 177 Query: 212 IWTGAEAKKVGLIDVV 227 +EA + GLID V Sbjct: 178 ---ASEAVEYGLIDKV 190 >gi|315042532|ref|XP_003170642.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma gypseum CBS 118893] gi|311344431|gb|EFR03634.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma gypseum CBS 118893] Length = 222 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 77/193 (39%), Gaps = 34/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 46 IVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS-- 103 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 104 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSV------MIHQ---------------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + + D+ L + + G Sbjct: 142 PSGGYFGQATDI-AIHAKEILRVRHQLNQIY----KRHLTGKEMTLDEIEKLMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AKEALEMGIVDSI 209 >gi|218901725|ref|YP_002449559.1| Clp protease [Bacillus cereus AH820] gi|218538595|gb|ACK90993.1| Clp protease [Bacillus cereus AH820] Length = 247 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S ++ E+++ + +A + V ++S GG + AI ++ ++ + +AA Sbjct: 42 SSSKVREQLKNV----TAKTINVHINSGGGDVFESIAISNLLKNHSAT--IVVHIDGLAA 95 Query: 109 SAGYLISCASNIIVAAETSL 128 S +I+ A++ IV + ++ Sbjct: 96 SGASVIAMAADKIVMPKNTM 115 >gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus CMCP6] gi|37679288|ref|NP_933897.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus YJ016] gi|320156969|ref|YP_004189348.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus MO6-24/O] gi|27359628|gb|AAO08567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio vulnificus CMCP6] gi|37198031|dbj|BAC93868.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio vulnificus YJ016] gi|319932281|gb|ADV87145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus MO6-24/O] Length = 208 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 47/204 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ +E P + +D R Sbjct: 153 AQEILT----------------IKTKLNKLL-----------AEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GL+D V Sbjct: 185 DNFMSADQAVEYGLVDAVLTHRSA 208 >gi|254523177|ref|ZP_05135232.1| peptidase S14, ClpP [Stenotrophomonas sp. SKA14] gi|219720768|gb|EED39293.1| peptidase S14, ClpP [Stenotrophomonas sp. SKA14] Length = 245 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 39/194 (20%) Query: 39 ARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 A I + G I D E + D + + + SPGG +A ++ AI + K Sbjct: 29 ATIYLHGVIGGWWGDIDETMFAQAMAGIDADV--IHLRIDSPGGDVFAARSMMTAIAQHK 86 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 VI + +AASA + A + + ++ + + + +G Sbjct: 87 AT--VIAHIDGLAASAMTGVCMACDKVEISQGAG------FMIH---NAWTITVGNKADM 135 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 +K+ + + + + Y + + D W Sbjct: 136 IKTGEL--------------LAKIDAGLAGDYT-------RRTGKDQSQIVQWMDEETWF 174 Query: 214 TGAEAKKVGLIDVV 227 T EAK+ G D V Sbjct: 175 TADEAKEHGFADEV 188 >gi|210621038|ref|ZP_03292423.1| hypothetical protein CLOHIR_00366 [Clostridium hiranonis DSM 13275] gi|210155022|gb|EEA86028.1| hypothetical protein CLOHIR_00366 [Clostridium hiranonis DSM 13275] Length = 244 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 74/200 (37%), Gaps = 36/200 (18%) Query: 30 HVEDNSPHVARIAIRGQI--------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 V++ + + A + G I +D+ + E ++ L + ++S GGS + Sbjct: 14 SVKNITNNKAVLYFYGDIVSSWWGAWDDTDQYPESVKNFLNGCEDKDLEIHINSGGGSVF 73 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AG I+ ++ K K V +AAS +I+ A + +V GS + + Sbjct: 74 AGITIYNMLKNFKGHK--TVYVDGLAASIASVIALAGDEVVMR----TGS--SMMIH--- 122 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 + + +S+ + +K + + +Q+ + Y ++ Sbjct: 123 ---KPSVYIYNQSLNADELKGMS--------ETLDKLQECIMQIYRENLKD-----KSKL 166 Query: 202 DKTLVLSDGRIW-TGAEAKK 220 ++ + + W T EA Sbjct: 167 EEIETMVNAETWMTSEEAMD 186 >gi|121603870|ref|YP_981199.1| peptidase S14, ClpP [Polaromonas naphthalenivorans CJ2] gi|120592839|gb|ABM36278.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas naphthalenivorans CJ2] Length = 641 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 69/196 (35%), Gaps = 38/196 (19%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 ++ ++ + G + ++ + ++ I D AT LIV ++S GGS AI+ ++ Sbjct: 2 STSKISIFSEIGSVVTAENIRSQLSYI---DDATPLIVEINSEGGSVSEAVAIYNLLRTW 58 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 K V E+ A SA +I+ A I A TSL I V + Sbjct: 59 KGG--VTVEIVGWALSAATVIAMAGQRIKAHATSL---IMVHAPWTNASG---------- 103 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR-I 212 + + + MQ + P DG+ Sbjct: 104 ------NAGAMRENAALLDQVALTMQAAYARTRQ------------PAKTLAAWMDGQDH 145 Query: 213 W-TGAEAKKVGLIDVV 227 W T EA +GL+D + Sbjct: 146 WFTAQEALALGLVDEI 161 >gi|121705182|ref|XP_001270854.1| Clp protease, putative [Aspergillus clavatus NRRL 1] gi|119399000|gb|EAW09428.1| Clp protease, putative [Aspergillus clavatus NRRL 1] Length = 256 Score = 62.5 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 81/193 (41%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++S ++ ++ + D+ + + ++SPGGS AG AI+ + + + Sbjct: 71 IICLNGEVDESMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYITS-- 128 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S SI + Sbjct: 129 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHS---SI---MIHQ---------------- 166 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + S ++ K + ++ ++ Y R ++ ++ + ++ L + + G Sbjct: 167 PSGGYFGQASDI-AIHAKEILRVRSQLNKIY---KRHLTGNKELSLEEIEKLMERDYFMG 222 Query: 216 A-EAKKVGLIDVV 227 A EA ++G++D + Sbjct: 223 ANEALEMGIVDEI 235 >gi|220910121|ref|YP_002485432.1| hypothetical protein Cyan7425_4766 [Cyanothece sp. PCC 7425] gi|219866732|gb|ACL47071.1| protein of unknown function DUF114 [Cyanothece sp. PCC 7425] Length = 296 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 22/187 (11%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS++++ I D + L +PGG A E I RA+ +++ V V Sbjct: 68 SIEDSEQVLRAIRLTPPDVPID---LILHTPGGLVLATEQIARAL--IRHPAKVTVMVPH 122 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVK--PFLDKLGVSIKSVKSSPMKA 162 A S G +++ A++ I+ +++G + L YP ++ + + Sbjct: 123 YAMSGGTMLALAADEIMMDANAVLGPVDPQLGNYPAASILKVVEDKPI-------GEIDD 175 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRI-----WTGA 216 + ++++ KA++ +Q V + V + D L+ GR+ T Sbjct: 176 QTLIMADLSRKAMRQVQRFVRTLLED-KNPVQKVAPEHIDGIIEALTTGRVTHDYPITVE 234 Query: 217 EAKKVGL 223 EA ++GL Sbjct: 235 EATELGL 241 >gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria sp. PCC 6506] gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria sp. PCC 6506] Length = 229 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 79/194 (40%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS AG AI+ +Q+V+ Sbjct: 51 RIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVRPD 110 Query: 97 KPVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T + +AAS +L++ A+ ++ +S + + + + V I+ Sbjct: 111 --VVTICYGLAASMGAFLMAAGAAGKRMSLPSSR------IMIHQPLGGAQGQA-VDIEI 161 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K ++N L++ P ++ ++ + Sbjct: 162 ----QAKEILYHKRKLNE-------------------LLAHHTGQPLERIEADTERDFFM 198 Query: 214 TGAEAKKVGLIDVV 227 + AEAK GL+D V Sbjct: 199 SAAEAKDYGLVDQV 212 >gi|260776382|ref|ZP_05885277.1| ATP-dependent Clp protease proteolytic subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260607605|gb|EEX33870.1| ATP-dependent Clp protease proteolytic subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 208 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + ++ D+ ++ Sbjct: 153 AQEILT----------------IKQKLNKLLAEHTGQPLEVIER----DTDRDNFMA--- 189 Query: 212 IWTGAEAKKVGLIDVV 227 +A + GL+D V Sbjct: 190 ---ADQAVEYGLVDAV 202 >gi|320450192|ref|YP_004202288.1| periplasmic serine protease [Thermus scotoductus SA-01] gi|320150361|gb|ADW21739.1| periplasmic serine protease [Thermus scotoductus SA-01] Length = 279 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 ++DS+E++ I D + + L +PGG A E I A+ +K+ V V Sbjct: 72 VDDSEEVLRAIR--LTDPGMP-IDLVLHTPGGLVLAAEQIALAL--LKHPAKVTVFVPHY 126 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ E +++G Sbjct: 127 AMSGGTLIALAADEIIMDENAVLG 150 >gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp [Caldicellulosiruptor hydrothermalis 108] gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp [Caldicellulosiruptor owensensis OL] gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876447|ref|ZP_07736431.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor lactoaceticus 6A] gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor owensensis OL] gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor hydrothermalis 108] gi|311796805|gb|EFR13150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor lactoaceticus 6A] gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor kristjanssonii 177R1B] Length = 195 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 30 IVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGFAIYDTMQYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 V T MAAS +L++ + A S + G GV Q +K Sbjct: 89 -VSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLG--GVRGQATDIK------- 138 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + +++ ++ +SE P + +D Sbjct: 139 IHAEWIL--------------------KIKNRINKI-------LSERTGQPIEVIERDTD 171 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + T EA K G+ID V Sbjct: 172 RDFFMTAEEALKYGIIDKV 190 >gi|239626582|ref|ZP_04669613.1| peptidase S14 ClpP [Clostridiales bacterium 1_7_47_FAA] gi|239516728|gb|EEQ56594.1| peptidase S14 ClpP [Clostridiales bacterium 1_7_47FAA] Length = 252 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 55/225 (24%) Query: 37 HVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + I I G++E + ++ ++ I DDS L+V L++ GG AG Sbjct: 54 KIHLITIIGEVEGHENSSGSSKTTKYDHILPKLAEIEDDDSVDGLLVLLNTSGGDVDAGL 113 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI I + P ++ V + S G ++ ++N + G + +P Sbjct: 114 AIAEMIASLSL--PTVSLVLGGSHSIGVPLAVSTNYSFIVPS------GTMMIHP----- 160 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V + + + + +M+QD + + V+ +I YD+ Sbjct: 161 -----VRMTGMVIG---------TAQTYEYFEMIQDRI-------LTFVASHADIAYDQL 199 Query: 205 LVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 L G + G +A + GLI+ VGG +E LY + Sbjct: 200 RDLMHNTKMLTRDLGTVLVGEQAVEAGLINQVGGIKEALGKLYEM 244 >gi|126175793|ref|YP_001051942.1| peptidase S14 ClpP [Shewanella baltica OS155] gi|125998998|gb|ABN63073.1| peptidase S14, ClpP [Shewanella baltica OS155] Length = 640 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 36/184 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q+ ++ + + + TA + SPGG + G AI+ I+ K + Sbjct: 5 EIGGWGISAQQFARDLQALGKVGTITA---RIHSPGGDVFEGMAIYNMIKGHPAHK--VC 59 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +I+ A + ++ E ++ + + KP+ LG Sbjct: 60 YIDGLAASMASVIAMAFDEVIMPENAM------MMVH---KPWGGTLG------------ 98 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + + ++ D++D V + D+ L W TG EA + Sbjct: 99 ---------DAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHALLAAETWLTGREAVE 149 Query: 221 VGLI 224 G Sbjct: 150 KGFA 153 >gi|222824462|ref|YP_002576036.1| ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP [Campylobacter lari RM2100] gi|254763785|sp|B9KDZ6|CLPP_CAMLR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|222539683|gb|ACM64784.1| ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP [Campylobacter lari RM2100] Length = 196 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 30 IIMLSGEINDDLAASIVAQLLFLEAEDPQKDIYLYINSPGGVVTSGFSIYDTMNYIKAD- 88 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 89 -VSTICIGQAASMGAFLLSCGAPGKRFALPNSR------IMIHQPLGGA----------- 130 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ K +D + + Sbjct: 131 -RGQATDI-----EIQAKEILRLKAILNDI-------LAKNTKQKLSKIEKDTDRDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 AIEAKEYGLIDKV 190 >gi|31340017|sp|Q8DG26|CLPP_VIBVU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|60389705|sp|Q7MMG7|CLPP_VIBVY RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp Length = 200 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 71/204 (34%), Gaps = 47/204 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 34 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 90 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 91 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 144 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ +E P + +D R Sbjct: 145 AQEILT----------------IKTKLNKLL-----------AEHTGQPLEVIERDTD-R 176 Query: 212 --IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GL+D V Sbjct: 177 DNFMSADQAVEYGLVDAVLTHRSA 200 >gi|57168633|ref|ZP_00367765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter coli RM2228] gi|305432739|ref|ZP_07401899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli JV20] gi|57019914|gb|EAL56594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter coli RM2228] gi|304444248|gb|EFM36901.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli JV20] Length = 194 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKL-GVSIKS 154 V T AAS +L+SC + A S + + + + + I++ Sbjct: 87 -VCTICIGQAASMGAFLLSCGAEGKRFALPNSR------IMIHQPLGGARGQATDIEIQA 139 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + +KA + + Q + +V + F + Sbjct: 140 KEILRLKAILNDI--LAKNTKQKVAKIVKDTERDF----------------------FMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 AQEAKEYGLIDKV 188 >gi|328910857|gb|AEB62453.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp [Bacillus amyloliquefaciens LL3] Length = 240 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 33/183 (18%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +I+ S ++ + D S + ++SPGGS + G AI +++ K V + Sbjct: 38 EIDTSAASFKQDLDLLGDMSVLNV--HINSPGGSVFEGVAICSMLKQHKAF--VNVYIDG 93 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 +AAS +I+ A + I ++ + + + ++ M+ + Sbjct: 94 LAASIASVIAMAGDAIFMPSNAM------MMVHNPWTIAMGN---------ANEMRKQAD 138 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 +++ + + + L D W + +EA GL Sbjct: 139 VLDKISESMKASYLE-------------KAGDKLTKETLDSLMDNETWLSASEAVSYGLA 185 Query: 225 DVV 227 D + Sbjct: 186 DEI 188 >gi|326482374|gb|EGE06384.1| ATP-dependent Clp protease proteolytic subunit [Trichophyton equinum CBS 127.97] Length = 223 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 77/193 (39%), Gaps = 34/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 46 IVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS-- 103 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 104 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSV------MIHQ---------------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + + ++ L + + G Sbjct: 142 PSGGYFGQATDI-AIHAKEILRVRHQLNQIY----KRHLTGKEMTLEEIEKLMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AKEALEMGIVDSI 209 >gi|326475380|gb|EGD99389.1| ATP-dependent Clp protease [Trichophyton tonsurans CBS 112818] Length = 246 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 77/193 (39%), Gaps = 34/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 69 IVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS-- 126 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 127 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSV------MIHQ---------------- 164 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + + ++ L + + G Sbjct: 165 PSGGYFGQATDI-AIHAKEILRVRHQLNQIY----KRHLTGKEMTLEEIEKLMERDYFMG 219 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 220 AKEALEMGIVDSI 232 >gi|327292805|ref|XP_003231100.1| ATP-dependent Clp protease [Trichophyton rubrum CBS 118892] gi|326466730|gb|EGD92183.1| ATP-dependent Clp protease [Trichophyton rubrum CBS 118892] Length = 223 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 77/193 (39%), Gaps = 34/193 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 46 IVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS-- 103 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 104 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSV------MIHQ---------------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + + ++ L + + G Sbjct: 142 PSGGYFGQATDI-AIHAKEILRVRHQLNQIY----KRHLTGKEMTLEEIEKLMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AKEALEMGIVDSI 209 >gi|323498276|ref|ZP_08103278.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sinaloensis DSM 21326] gi|323316704|gb|EGA69713.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sinaloensis DSM 21326] Length = 208 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + ++ D+ ++ Sbjct: 153 AQEILT----------------IKQKLNKLLAEHTGQPLEVIER----DTDRDNFMA--- 189 Query: 212 IWTGAEAKKVGLIDVV 227 +A + GL+D V Sbjct: 190 ---ADQAVEYGLVDAV 202 >gi|294665723|ref|ZP_06730997.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604507|gb|EFF47884.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 215 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 48/189 (25%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G I+++ E ++ + I D + + + SPGG +A A+ AI + K VI V Sbjct: 12 GDIDET-EFVKALAAIDADT----IHLRIDSPGGDVFAARAMMTAIAQHKAT--VIAHVD 64 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA-- 162 +AASA I A + + + + + + +G K+ + Sbjct: 65 GLAASAATGICMACDEVEITQGAG------FMIH---NAWTIAIGNKADMAKTGELLGKI 115 Query: 163 ----EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 + Q++Q + D ++ +T EA Sbjct: 116 DDGLAGDYTRRTGNEVAQVVQWMNDETW--------------------------FTADEA 149 Query: 219 KKVGLIDVV 227 K+ G D V Sbjct: 150 KEHGFADRV 158 >gi|297617218|ref|YP_003702377.1| peptidase S14 ClpP [Syntrophothermus lipocalidus DSM 12680] gi|297145055|gb|ADI01812.1| peptidase S14 ClpP [Syntrophothermus lipocalidus DSM 12680] Length = 236 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 39/197 (19%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + + L+V L++ GG AG A+ I + KP ++ V S Sbjct: 64 EHVIPQLVAVEENPDIRGLLVILNTVGGDVEAGLALAEMIASMS--KPSVSIVLGGGHSI 121 Query: 111 GYLISCASNI-IVAAETSLVGSI------GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G ++ +++ +A ++ I G++ P +LDK+ + + K Sbjct: 122 GVTLAVSTSYSFIAHTATMT--IHPIRLTGLVIGVPQTYEYLDKMQDRVVRFVTEHSKVS 179 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S F E+ F R + + G + G +A +GL Sbjct: 180 ESQFREL-----------------MF-------RTGELARDI----GTVLVGKDAVDIGL 211 Query: 224 IDVVGGQEEVWQSLYAL 240 ID VGG +E L L Sbjct: 212 IDEVGGIKEALAKLRGL 228 >gi|332978057|gb|EGK14795.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437] Length = 201 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I I+DS ++ ++ ++ DD + + ++SPGGS AG AI+ +Q +K Sbjct: 37 IIFIGSPIDDSVANSVMAQMLFLAADDPDKEISLYINSPGGSITAGMAIYDTMQYIKPD- 95 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 V T MAAS +L++ + A S V G GV Q ++ Sbjct: 96 -VSTICVGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLG--GVRGQAADIQ------- 145 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + K + + +++ + P K SD Sbjct: 146 IHAEWIL----------------KTRKRIYEIL-----------AGRTGQPLSKIERDSD 178 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + EAK+ GL+D V Sbjct: 179 RDFFMDAQEAKEYGLVDQV 197 >gi|262192152|ref|ZP_06050312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae CT 5369-93] gi|262031941|gb|EEY50519.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae CT 5369-93] Length = 167 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 1 MIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 57 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 58 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 111 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + ++ + ++ R+ D Sbjct: 112 AQEILTIKNK----------------LNRLLAEHTGQPIEVIE--RDTDRDN-------- 145 Query: 212 IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 146 FMSADQAVEYGLVDAV 161 >gi|23008901|ref|ZP_00050152.1| hypothetical protein Magn03003892 [Magnetospirillum magnetotacticum MS-1] Length = 128 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 39/73 (53%) Query: 34 NSPHVARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKV 93 +ARI+I G I S+ + IER+ + ++VS+SSPGG+ E + R ++ + Sbjct: 51 TESQIARISIGGFIAGSESTRKLIERVGDAKAVQGVVVSISSPGGTXTGSEELXRXLRAL 110 Query: 94 KNRKPVITEVHEM 106 +KP++ V Sbjct: 111 AAKKPIVAFVDGT 123 >gi|283955378|ref|ZP_06372877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 414] gi|283793138|gb|EFC31908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 414] Length = 194 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 74/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D A + + ++SPGG +G +I+ + +K Sbjct: 28 IIMLSGEIHDELASSIVAQLLFLEAEDPAKDIYLYINSPGGVITSGFSIYDTMNYIKPN- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 87 -VCTICIGQAASMGAFLLSCGAEGKRFALPNSR------IMIHQPLGGA----------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ K ++ + + Sbjct: 129 -RGQATDI-----EIQAKEILRLKTILNDI-------LAKNTKQKVAKIAKDTERDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 AQEAKEYGLIDKV 188 >gi|238062482|ref|ZP_04607191.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] gi|237884293|gb|EEP73121.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] Length = 212 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + ++ ++ ++ +DS + + ++SPGGS AG A++ ++ V+N V T MA Sbjct: 53 ESANQICAQLLLLAAEDSERDIHLYINSPGGSVSAGMAVYDTMRYVRND--VATLALGMA 110 Query: 108 ASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 S G + CA + A S + + P Sbjct: 111 GSMGQFLLCAGTAGKRYALPHSR------IMMHQ-------------------PSGGFGG 145 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 +++ +A M+ L++ ++ D R +T EA++ GL+ Sbjct: 146 TVADITIQAENML-----HVKRTMQELIARHSGRTLEQIRQDWDRDRWFTAEEAREYGLV 200 Query: 225 DVVGGQEEVWQS 236 D V + + + Sbjct: 201 DQVLTRVDQLAA 212 >gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans C-125] gi|11386690|sp|Q9K709|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans C-125] Length = 194 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGMAIYDTMQYIKPN- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A S V + + Sbjct: 88 -VSTICIGMAASMGAFLLAAGAKGKRFALPNSEV------MIHQPLGG------------ 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 ++ + R+++E P ++ +D R Sbjct: 129 TRGQASDI------------EIHTRRILEMRETLNRILAERTGQPLEQIAKDTD-RDNFM 175 Query: 214 TGAEAKKVGLIDVV 227 T +A++ GLID V Sbjct: 176 TAEKAREYGLIDKV 189 >gi|217971973|ref|YP_002356724.1| peptidase S14 ClpP [Shewanella baltica OS223] gi|217497108|gb|ACK45301.1| peptidase S14 ClpP [Shewanella baltica OS223] Length = 669 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 36/184 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q+ ++ + + + TA + SPGG + G AI+ I+ K + Sbjct: 33 EIGGWGISAQQFARDLQALGKVGTITA---RIHSPGGDVFEGMAIYNMIKGHPAHK--VC 87 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +I+ A + ++ E ++ + + KP+ LG Sbjct: 88 YIDGLAASMASVIAMAFDEVIMPENAM------MMVH---KPWGGTLG------------ 126 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + + ++ D++D V + D+ L W TG EA + Sbjct: 127 ---------DAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHALLAAETWLTGREAVE 177 Query: 221 VGLI 224 G Sbjct: 178 KGFA 181 >gi|190892539|ref|YP_001979081.1| endopeptidase Clp protein, subunit 1 [Rhizobium etli CIAT 652] gi|218516193|ref|ZP_03513033.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli 8C-3] gi|190697818|gb|ACE91903.1| endopeptidase Clp protein, subunit 1 [Rhizobium etli CIAT 652] Length = 203 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++ + + ++SPGG+ +G A++ ++ + Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEAENPNKPINLYINSPGGAVTSGLAMYDTMRFIHA-- 90 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEPGERAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERGMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVV 227 EA + GLID + Sbjct: 182 EEALEWGLIDRI 193 >gi|156564664|gb|ABU80635.1| exfoliative toxin [Staphylococcus intermedius] Length = 48 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNR-KPVITEVHEMAASAGYLISCAS 118 ++SPGG Y + ++ I++VK+ K + ++ +AAS GY IS + Sbjct: 2 VNSPGGGTYESDEFYQKIKEVKDSGKKIFVQMENLAASGGYYISAPA 48 >gi|15965008|ref|NP_385361.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium meliloti 1021] gi|307301080|ref|ZP_07580849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium meliloti BL225C] gi|307317814|ref|ZP_07597252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium meliloti AK83] gi|18202306|sp|P58278|CLPP2_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|15074187|emb|CAC45834.1| Probable ATP-dependent CLP protease proteolytic subunit [Sinorhizobium meliloti 1021] gi|306896576|gb|EFN27324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium meliloti AK83] gi|306904035|gb|EFN34621.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium meliloti BL225C] Length = 208 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 37/204 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 37 IIFLTGPVEDHMATLVCAQLLFLEAENPKKEVALYINSPGGVVTAGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ A ++ A S + + Sbjct: 96 -VSTLCIGQAASMGSLLLAAGHKDMRFATPNSR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + Y++ D + + Sbjct: 133 PSGGFQGQASDI-ERHARDILKMKRRLNEVY-------VKHCGRTYEEVEQTLDRDHFMS 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLY 238 EA GLID V + + + Sbjct: 185 ADEALDWGLIDKVITSRDAVEGME 208 >gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp. PCC 6506] gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp. PCC 6506] Length = 197 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + + DDS + + ++SPGGS AG AIF +Q +K+ V+T AAS Sbjct: 44 ANRIVAYLLYLDSDDSTKPIFIYINSPGGSVTAGMAIFDTMQYIKSE--VVTMCVGQAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A + + + P+ Sbjct: 102 MGAFLLAAGTKGKRLALPHAR------IMIHQ-------------------PLGGTRGQA 136 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +++ +A +++ ++++ +K +D + + AEAK+ GLID Sbjct: 137 TDIQIEAKEIL-----RVRQQLNEMLAKRTGQTLEKIQKDTDRDYFMSAAEAKEYGLIDQ 191 Query: 227 V 227 V Sbjct: 192 V 192 >gi|228942974|ref|ZP_04105481.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228976599|ref|ZP_04137044.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980374|ref|ZP_04140684.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis Bt407] gi|228779194|gb|EEM27451.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis Bt407] gi|228783116|gb|EEM31250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816700|gb|EEM62818.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 234 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 68/198 (34%), Gaps = 37/198 (18%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ ++++ + +D LIVS++SPGG G I+ A++ V ++ +AASA Sbjct: 8 KITKQLDNANSED----LIVSINSPGGYVDEGSEIYTALKNYPGH--VEVQIVGLAASAA 61 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +I+ A + + + T+ + + G + + Sbjct: 62 SVIAMAGDKVRISPTAKI----------MIHNAAKWHG--------GDHRDMEKAAEMLK 103 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQ 230 ++ V S ++ L + W G +A + D + Sbjct: 104 ITDRAIVNAYVIKS------------GKSEEELLNMMAEETWMGPQQALENNFADEIMFM 151 Query: 231 EEVWQSLYALGVDQSIRK 248 E + ++ + + Sbjct: 152 ENPVKMTASMATAAMLPQ 169 >gi|220929125|ref|YP_002506034.1| peptidase S14 ClpP [Clostridium cellulolyticum H10] gi|219999453|gb|ACL76054.1| peptidase S14 ClpP [Clostridium cellulolyticum H10] Length = 254 Score = 62.1 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 73/200 (36%), Gaps = 45/200 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I L++ L++ GG AG AI + + KP ++ V S Sbjct: 69 EHIIPQLVAIEESKQIEGLLLVLNTVGGDVEAGLAISEMVSSLS--KPTVSLVLGGGHSI 126 Query: 111 GYLISCASNI-IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G ++ ++N +A+ ++ +P + G+ I Sbjct: 127 GVPMAVSANYSFIASSATMT-------IHP-----IRMNGLVIGV--------------P 160 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-------SD--GRIWTGAEAKK 220 + MQ+ V V V I +K L ++ G + G EA + Sbjct: 161 QTYEYFDKMQERV-------VNFVCSHSGIKKEKFRELMLKTGELANDVGTVLFGEEATQ 213 Query: 221 VGLIDVVGGQEEVWQSLYAL 240 GLI+ VGG + + L L Sbjct: 214 TGLINQVGGLSDAIKKLNEL 233 >gi|159903903|ref|YP_001551247.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9211] gi|159889079|gb|ABX09293.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9211] Length = 223 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 38/183 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK+ V+T +AAS Sbjct: 67 ANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSD--VVTICVGLAAS 124 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKL--GVSIKSVKSSPMKAEPS 165 +L+S + N +A S + + + + + I+ Sbjct: 125 MGAFLLSAGTKNKRLALPHSR------IMIHQPLGGTSQRQASDIEIE------------ 166 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 K + ++++++ S ++E ++K +D + + EA++ GLI Sbjct: 167 ------AKEILRIKEMLNRS-------LAEMTGQSFEKIEKDTDRDYFLSAKEAEEYGLI 213 Query: 225 DVV 227 D V Sbjct: 214 DKV 216 >gi|262369923|ref|ZP_06063250.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter johnsonii SH046] gi|262314962|gb|EEY96002.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter johnsonii SH046] Length = 201 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFMTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNSGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYETVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQAAKEYGLVDEV 196 >gi|291286449|ref|YP_003503265.1| hypothetical protein Dacet_0511 [Denitrovibrio acetiphilus DSM 12809] gi|290883609|gb|ADD67309.1| protein of unknown function DUF107 [Denitrovibrio acetiphilus DSM 12809] Length = 412 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 102/281 (36%), Gaps = 49/281 (17%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLS 74 L+ L ++ +++ +D + I + G I E + ++ + L++ L Sbjct: 4 LLFLILMAAAFTVQAKD----IFVITVDGVITGYTEKYIETSLKEAKANGGV--LLIQLD 57 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA---SAGYLISCASNIIVAAETSLVGS 131 +PGG + I + + +++ PVI V A SAG I AS+ AE + +G Sbjct: 58 TPGGILDSTRGIVQVL--LESDTPVIIFVSPQGARAGSAGTFIVLASHYAAMAEGTNIG- 114 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 +P V++ M +++ F+R Sbjct: 115 ----AAHP----------VNVTG-----------------KDLEGHMAQKIENDTVAFMR 143 Query: 192 LVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 ++E R + ++D + +T EA +GL+D V + L + K+ Sbjct: 144 SIAEKRGRDVESAVSTVTDSKSYTAKEALSLGLVDQVTNTIDEVSEAAGLKLGFQPGKVV 203 Query: 251 DWN---PPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGLW 288 K +F N+ + L + + + K+ G + Sbjct: 204 HLTATPLQKVAFFLSDPNVLVLLLFIGILAIFLEFKIPGTF 244 >gi|308172739|ref|YP_003919444.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp [Bacillus amyloliquefaciens DSM 7] gi|307605603|emb|CBI41974.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp [Bacillus amyloliquefaciens DSM 7] Length = 240 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 33/183 (18%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +I+ S ++ + D S + ++SPGGS + G AI +++ K V + Sbjct: 38 EIDTSAASFKQDLDLLGDMSVLNV--HINSPGGSVFEGVAICSMLKQHKAF--VNVYIDG 93 Query: 106 MAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 +AAS +I+ A + I ++ + + + ++ M+ + Sbjct: 94 LAASIASVIAMAGDAIFMPSNAM------MMVHNPWTIAMGN---------ANEMRKQAD 138 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 +++ + + + L D W + +EA GL Sbjct: 139 VLDKISESMKASYLE-------------KAGDKLTKETLDSLMDNETWLSASEAVSYGLA 185 Query: 225 DVV 227 D + Sbjct: 186 DEI 188 >gi|222150769|ref|YP_002559922.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus caseolyticus JCSC5402] gi|254763793|sp|B9EAG5|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus caseolyticus JCSC5402] Length = 194 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D+ + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIYDTMQHIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A + V + + + Sbjct: 88 -VQTICIGMAASMGSFLLAAGAKGKRFALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + R+++E P +K +D R Sbjct: 134 -----------------TEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTD-RDNFL 175 Query: 214 TGAEAKKVGLIDVVGGQEE 232 T EAK GLID V E Sbjct: 176 TADEAKAYGLIDEVMHPAE 194 >gi|237738073|ref|ZP_04568554.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Fusobacterium mortiferum ATCC 9817] gi|229419953|gb|EEO35000.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Fusobacterium mortiferum ATCC 9817] Length = 257 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 7/98 (7%) Query: 35 SPHVARIAIRGQIED----SQELI-ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 ++A ++I G+I E+ I+ + L + ++S GG+ +AG AI+ Sbjct: 31 QDNIAELSIYGEISSDKWWGDEVTPTEIKELLDTVKNKDLNIFINSSGGNVFAGLAIYHM 90 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 +++ + +K V +AAS +I+ A + I + + Sbjct: 91 LKRHEGKKKVYV--DGVAASIASIIAMAGDEIHIPKNA 126 >gi|152999295|ref|YP_001364976.1| peptidase S14 ClpP [Shewanella baltica OS185] gi|151363913|gb|ABS06913.1| peptidase S14 ClpP [Shewanella baltica OS185] Length = 671 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 36/184 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q+ ++ + + + TA + SPGG + G AI+ I+ K + Sbjct: 33 EIGGWGISAQQFARDLQALGKVGTITA---RIHSPGGDVFEGMAIYNMIKGHPAHK--VC 87 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +I+ A + ++ E ++ + + KP+ LG Sbjct: 88 YIDGLAASMASVIAMAFDEVIMPENAM------MMVH---KPWGGTLG------------ 126 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + + ++ D++D V + D+ L W TG EA + Sbjct: 127 ---------DAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHALLAAETWLTGREAVE 177 Query: 221 VGLI 224 G Sbjct: 178 KGFA 181 >gi|154500232|ref|ZP_02038270.1| hypothetical protein BACCAP_03896 [Bacteroides capillosus ATCC 29799] gi|150270964|gb|EDM98238.1| hypothetical protein BACCAP_03896 [Bacteroides capillosus ATCC 29799] Length = 245 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 86/246 (34%), Gaps = 59/246 (23%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLS 74 S+ ++ V + I GQIE Q ++ + I +++ L+ Sbjct: 31 GSTTIKTERGTVHTLTIVGQIEGHQLLPSTAKTTKYEHVMPLLAAIEESSEVDGVLILLN 90 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS------- 127 + GG AG I I ++ KP ++ V S G ++ ++ A ++ Sbjct: 91 TVGGDIEAGLGIAELIASMR--KPTVSLVLGGGHSIGVPLAVSAKTSFIAPSAAMTIHPV 148 Query: 128 ----LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 LV IGV + Y + D++ I+ V + + + +Q Sbjct: 149 RLNGLV--IGVPQTFYYFERIQDRI---IQFVTKNSHVDRETFTRMM-------LQT--- 193 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVD 243 G + G EA K+GLID +GG + L+ + + Sbjct: 194 --------------GELAADV-----GSVIYGEEAVKIGLIDRIGGLSDALDCLHGMMEE 234 Query: 244 QSIRKI 249 + R++ Sbjct: 235 EQQRRM 240 >gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51] gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfitobacterium hafniense DCB-2] gi|116243113|sp|Q24S49|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfitobacterium hafniense DCB-2] Length = 202 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 74/192 (38%), Gaps = 32/192 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D + ++ ++ + +D + + ++SPGGS AG AI+ +Q ++ Sbjct: 30 IIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGSISAGMAIYDTMQYIRAD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS +L++ + G P + + + Sbjct: 89 -VHTICVGLAASMGAFLLTAGAK-------------GKRQALPNAEIL-----IHQPLIG 129 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 + + + +++ + R+++E ++ +D R T Sbjct: 130 GGGISGQAT--------EIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTA 181 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 182 EEAKEYGLIDEV 193 >gi|318040432|ref|ZP_07972388.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CB0101] Length = 200 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 40/191 (20%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 + I +S L+ ++ + +D++ + + ++SPGGS AG AI+ IQ VK+ V+T Sbjct: 38 EVNDAIANS--LVAQMLYLDSEDNSKPIYLYINSPGGSVTAGLAIYDTIQYVKSD--VVT 93 Query: 102 EVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKL--GVSIKSVKS 157 +AAS +L+ + +A S + + + + + I++ + Sbjct: 94 ICVGLAASMGAFLLGAGTKGKRLALPHSR------IMIHQPLGGTSQRQASDIEIEAREI 147 Query: 158 SPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 +K + +++ + + ++ D Y + Sbjct: 148 LRIKDMLNQSMADMTGQELAKIEKDTDRDY-------------------------FLSAE 182 Query: 217 EAKKVGLIDVV 227 EAK GLID V Sbjct: 183 EAKNYGLIDRV 193 >gi|293610272|ref|ZP_06692573.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827504|gb|EFF85868.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124452|gb|ADY83975.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter calcoaceticus PHEA-2] Length = 201 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYETVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQAAKEYGLVDQV 196 >gi|262276278|ref|ZP_06054087.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae CIP 101886] gi|262220086|gb|EEY71402.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae CIP 101886] Length = 207 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 73/201 (36%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQYI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PDVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + +E + +++++ D F+ Sbjct: 153 AQEILTIKH-RLNTLLAEHTGQPLEVIERDTDR--DNFMA-------------------- 189 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 +A GL+D V + + Sbjct: 190 ---AQDAVNYGLVDAVLNKRD 207 >gi|153839648|ref|ZP_01992315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus AQ3810] gi|260902813|ref|ZP_05911208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus AQ4037] gi|149746838|gb|EDM57826.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus AQ3810] gi|308108649|gb|EFO46189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus AQ4037] gi|328473326|gb|EGF44174.1| ATP-dependent Clp protease proteolytic subunit [Vibrio parahaemolyticus 10329] Length = 208 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 74/198 (37%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLIS-CASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ A+ S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + +++ +E P + +D R Sbjct: 153 AQEILT----------------IKQKLNNLL-----------AEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + G++D V Sbjct: 185 DNFMSAEQAVEYGIVDAV 202 >gi|313111246|ref|ZP_07797064.1| ClpP protease [Pseudomonas aeruginosa 39016] gi|310883566|gb|EFQ42160.1| ClpP protease [Pseudomonas aeruginosa 39016] Length = 296 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 66/190 (34%), Gaps = 36/190 (18%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ ++ + + I D +IV+++SPGG + G AI+ +++ K + V + Sbjct: 59 GEGVTAKRIAGVLRSIGNDVD---VIVNINSPGGDVFEGLAIYNLLREHKGK--VTVNII 113 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AASA I+ A + I IG +L +G + ++ Sbjct: 114 GLAASAASFIAMAGDEIR---------IGRAAFLMIHNAWLIAMG------NRNDLREIA 158 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGL 223 + Y ++ I D + + W G EA G Sbjct: 159 DWLEP--------FDMTLADIY-------AQRTGIDLDDIVKQMNAETWIGGREAVDKGW 203 Query: 224 IDVVGGQEEV 233 D +E+ Sbjct: 204 ADAFLESDEI 213 >gi|269839326|ref|YP_003324018.1| hypothetical protein Tter_2297 [Thermobaculum terrenum ATCC BAA-798] gi|269791056|gb|ACZ43196.1| protein of unknown function DUF114 [Thermobaculum terrenum ATCC BAA-798] Length = 286 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS+ ++ + D S + + L +PGG A E I RA++ + V V Sbjct: 65 IEDSEAVLRAVH--LTDPSVP-IDMILHTPGGLVIAAEQIARALKAHPAK--VTVFVPHY 119 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV +++G Sbjct: 120 AMSGGTLIALAADEIVMGPHAVLG 143 >gi|260893129|ref|YP_003239226.1| peptidase S14 ClpP [Ammonifex degensii KC4] gi|260865270|gb|ACX52376.1| peptidase S14 ClpP [Ammonifex degensii KC4] Length = 234 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 69/199 (34%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ + + ++V L++ GG AG AI + + KP ++ V S Sbjct: 57 EHVLPQLVALEQHPEIEGILVILNTVGGDVEAGLAIAEMLASLS--KPTVSLVLGGGHSI 114 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ A+ ET+ ++ +GV Sbjct: 115 GVPIAVAARYSFITETAS-------MTIHPIRLTGQVIGV------------------PQ 149 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-------SD--GRIWTGAEAKKV 221 + ++ MQD V ++ V I + L + G + G EA Sbjct: 150 TWEYLEKMQDRV-------IKFVVRHSRIEEWRFRELMFRSGELARDIGTVLVGREAVDC 202 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 203 GLIDEVGGVRKALAKLREL 221 >gi|119717699|ref|YP_924664.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Nocardioides sp. JS614] gi|119538360|gb|ABL82977.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides sp. JS614] Length = 195 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 77/207 (37%), Gaps = 41/207 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ +S +D + + ++SPGGS AG AI+ + + N V T +A Sbjct: 27 QNANAICAQLLLLSAEDPEADIFLHINSPGGSVDAGMAIYDTMNYIPND--VATVGMGLA 84 Query: 108 ASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + CA A + + + P Sbjct: 85 ASMGQFLLCAGTKGKRYALPHAR------IMMHQ-------------------PSSGMGG 119 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 S++ +A Q + + L++E ++ + +D R +T +AK+ GL+ Sbjct: 120 SASDIKIQAQQSL-----HIKKVLLELIAEHTGQTVEQIEMDADRDRWFTADQAKEYGLV 174 Query: 225 DVVGGQEEVWQSLYALGVDQSIRKIKD 251 D V +S D + KD Sbjct: 175 DQ------VIKSAREAADDGRPARQKD 195 >gi|241894905|ref|ZP_04782201.1| ATP-dependent Clp protease proteolytic subunit [Weissella paramesenteroides ATCC 33313] gi|241871913|gb|EER75664.1| ATP-dependent Clp protease proteolytic subunit [Weissella paramesenteroides ATCC 33313] Length = 242 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 75/209 (35%), Gaps = 49/209 (23%) Query: 30 HVEDNSPHVARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSA 80 ++ VA I I G+I + + + ++ + + +S++SPGGS Sbjct: 4 QMKATDNEVAEIHIDGEIVSEKLWDSDVSATDFRDSLKELG---PVKTINMSINSPGGSV 60 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 + G AI+ ++ KN V V +AAS +I+ A + + GS +L + Sbjct: 61 FDGIAIYNMLK--KNPATVNVTVEGLAASIASVIAMAGDTLTMD----TGS--MLMIH-- 110 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEV--NPKAVQMMQDVVDSSYHWFVRLVSESRN 198 +PF+ N ++ M D +D V + E Sbjct: 111 ------------------------NPFTMAVGNASELREMADTLDQIRESSVNIYHEKTG 146 Query: 199 IPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 I + + D W T EA G D Sbjct: 147 IDKEAIKSVMDNETWLTADEAITAGWADQ 175 >gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp. PCC 6803] gi|2493737|sp|Q59993|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp. PCC 6803] Length = 226 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS YAG AI+ +Q+++ Sbjct: 48 RIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPD 107 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S +A +S + + + + V I+ Sbjct: 108 --VVTICFGLAASMGAFLLSGGCKGKRMALPSSR------IMIHQPLGGAQGQA-VEIEI 158 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + + ++D +++ + E P +K ++ + Sbjct: 159 ----------------QAREILYIKDRLNTM-------LVEHTGQPMEKLQEDTERDFFM 195 Query: 214 TGAEAKKVGLIDVV 227 + EAK+ GLID V Sbjct: 196 SAEEAKEYGLIDQV 209 >gi|116618740|ref|YP_819111.1| protease subunit of ATP-dependent Clp protease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097587|gb|ABJ62738.1| Protease subunit of ATP-dependent Clp protease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 229 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 33/160 (20%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++S GG A I+ A++ + VIT++ A SA +I+ A + + + + Sbjct: 47 INSGGGEVDAANEIYTALRNYPGK--VITQIESSAYSAASIIAMAGDTVQISPVA----- 99 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 L + + + + + + + Sbjct: 100 -QLMIH------------NASTYAGGNHNDLDKTSNALKSTDKAIAKAY----------S 136 Query: 193 VSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQE 231 V R P D+ L L D W +A ++GL+D V E Sbjct: 137 VKTGR--PVDEFLALMDKETWINADDALELGLVDEVMTFE 174 >gi|229104552|ref|ZP_04235218.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock3-28] gi|228678888|gb|EEL33099.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock3-28] Length = 239 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 47/209 (22%) Query: 32 EDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + + A + I G+I S ++ + + + ++SPGGS + Sbjct: 3 ASANGNTADVFIYGEITKYAWEEYGEVSSITFKNELDELGN--GIETINLYINSPGGSVF 60 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 AI +Q+ + VI+ + + AS ++ S+ I+ S+ L + Sbjct: 61 ETMAIIAMLQRHPAK--VISYIDGIGASCASVLPMISDKIIMYANSM------LMVH--- 109 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR--LVSESRNI 199 + + S N ++ D ++ V+ L + Sbjct: 110 ---------NAWTYASG------------NADQLRKAADDIERINKSMVQHYLTRAGDKL 148 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D L D W + EA + GL D + Sbjct: 149 DEDILKQLLDAETWLSADEAMEYGLCDEI 177 >gi|33240837|ref|NP_875779.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|67460521|sp|Q7VAR9|CLPP2_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|33238366|gb|AAQ00432.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 200 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L+S + N +A S + + + + I+ Sbjct: 102 MGAFLLSAGTKNKRLALPHSR------IMIHQPLGGTSQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 K + ++D+++ S ++E P++K +D + + EAK GLID Sbjct: 143 ---EAKEILRIKDMLNRS-------MAEMTGQPFEKIEKDTDRDYFLSAKEAKDYGLIDK 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|304404310|ref|ZP_07385972.1| peptidase S14 ClpP [Paenibacillus curdlanolyticus YK9] gi|304347288|gb|EFM13120.1| peptidase S14 ClpP [Paenibacillus curdlanolyticus YK9] Length = 249 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 91/244 (37%), Gaps = 55/244 (22%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDS 65 V T+ F +S ++ + I GQ+E + LI ++ ++ Sbjct: 26 VVETITQFGQTSTPAPADSNIYCMTIIGQVEGHLVLPPQNKTTKYEHLIPQLVAAEQNPK 85 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 +++ L++ GG AG AI I + KP +T V S G I+ ++N AE Sbjct: 86 IEGILIVLNTVGGDVEAGLAIAEMISSL--TKPTVTLVLGGGHSIGVPIAVSANRSFIAE 143 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 ++ + +P + G+ I + + MQ+ V Sbjct: 144 SA------TMTIHP-----IRLNGLVIGV--------------PQTFEYLDKMQERV--- 175 Query: 186 YHWFVRLVSESRNIPYD--KTLVLSDGR-------IWTGAEAKKVGLIDVVGGQEEVWQS 236 VR V+ NI K L+ G GA+A K GLID VGG + + Sbjct: 176 ----VRFVTSHSNISEQLFKELMFKTGELTRDIGTTVIGADAVKHGLIDAVGGIGDALIA 231 Query: 237 LYAL 240 L A+ Sbjct: 232 LNAM 235 >gi|237807855|ref|YP_002892295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas auensis DSM 9187] gi|237500116|gb|ACQ92709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas auensis DSM 9187] Length = 207 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 75/198 (37%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ ++ + K Sbjct: 42 VIFLTGQVEDQMANLIVAQLLFLESENPDKDIYIYINSPGGSVTAGMAIYDTLKFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L+S + ++ V + + + + Sbjct: 99 PDVSTVCMGQACSMGAFLLSAGTKGKRFCLPSARV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +++ ++ L++E P ++ +D R Sbjct: 153 --------------------AMEILKIKERLN-------NLLAEHTGQPLERIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + GL+D + Sbjct: 185 DNFMSADQAVEYGLVDAI 202 >gi|237738529|ref|ZP_04569010.1| protease IV [Fusobacterium sp. 2_1_31] gi|229424227|gb|EEO39274.1| protease IV [Fusobacterium sp. 2_1_31] Length = 232 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 82/206 (39%), Gaps = 21/206 (10%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIERISRDDS 65 +K K + V +SL + V F+ VED V+ ++I + ++ +E + D Sbjct: 30 RKFKNKDV-ISLKGVKTVVFNIGELVEDY--MVSAVSINKAL-SHDVTLKALENLVDDKK 85 Query: 66 ATALIVSLSSPGGSA----YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 +I+ + E I +K+ K +I + Y I+ ++ I Sbjct: 86 IEKIIIDVD----EVDLSRVHIEEIKEIFKKLSVDKEIIA-IGTTFDEYSYQIALLADKI 140 Query: 122 VAAETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAV 175 T S G ++ PY K L LGV++ ++ K FS ++ + Sbjct: 141 YMLNTKQ--SCLYFRGYEYKEPYFKNVLATLGVTVNTLHIGDYKVAGESFSHDKMTEEKK 198 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPY 201 + + ++ ++ + F+ LV E R I Sbjct: 199 ESLMNIKETLFQNFINLVKEKRKIDI 224 >gi|330506735|ref|YP_004383163.1| hypothetical protein MCON_0500 [Methanosaeta concilii GP-6] gi|328927543|gb|AEB67345.1| Protein of unknown function (DUF114) [Methanosaeta concilii GP-6] Length = 293 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IEDS++++ I R +D +I+ +PGG A A I A++ +K VI Sbjct: 82 IEDSEKVLRAIRRAQKDIPID-IILH--TPGGLALAATQIAMALKSHPAKKTVIV--PHY 136 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ + + +G Sbjct: 137 AMSGGTLIAFAADQIIMDQHAALG 160 >gi|147677625|ref|YP_001211840.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum thermopropionicum SI] gi|146273722|dbj|BAF59471.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum thermopropionicum SI] Length = 286 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 85/236 (36%), Gaps = 57/236 (24%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 S+ + + ++ + I GQIE + +I ++ + + +++ L+ Sbjct: 66 GSTSMPEVKSNIHCLTIVGQIEGHLVLPPQNKTTKYEHVIPQLVALEQAPEVEGILIVLN 125 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLVGSIG 133 + GG AG AI I + KP ++ V S G I+ + +AA S+ Sbjct: 126 TVGGDVEAGLAIAEVIASIS--KPTVSVVLGGGHSIGVPIAVGAQYSFIAATASMT---- 179 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 +P + G+ I + + MQD V VR V Sbjct: 180 ---IHP-----IRLNGLVIGV--------------PQTYEYLDKMQDRV-------VRFV 210 Query: 194 SESRNIPYDKTLVL--SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 E I +K L G + G EA +VGLID VGG E L + Sbjct: 211 VEHSKISEEKFRELMFRTGELARDIGTVLIGREAVEVGLIDAVGGVGEAVARLKNM 266 >gi|6723193|dbj|BAA89605.1| capsid protein [Bacteriophage WO] gi|6723205|dbj|BAA89611.1| capsid protein [Bacteriophage WO] Length = 113 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 5 LQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 >gi|310829091|ref|YP_003961448.1| hypothetical protein ELI_3526 [Eubacterium limosum KIST612] gi|308740825|gb|ADO38485.1| hypothetical protein ELI_3526 [Eubacterium limosum KIST612] Length = 195 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 74/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D+ ++ ++ + D+ + + ++SPGGS +G AI+ + +K Sbjct: 31 IIFLDGEINDTTSSLIVAQLIFLEADNPDKDIEMYINSPGGSITSGFAIYDTMNFIKCD- 89 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A S + + + + V ++ Sbjct: 90 -VSTMCVGMAASMGAFLLAAGAKGKRKALPNSE------IMIHQPLGGAQGQS-VDVEIY 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + +++ + +++ R+ D + Sbjct: 142 AKRLIK------------TREKLNEILSEKTGQPIDVIA--RDTDRDN--------FMSA 179 Query: 216 AEAKKVGLIDVV 227 EA + GLID + Sbjct: 180 EEALEYGLIDQI 191 >gi|262280902|ref|ZP_06058685.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter calcoaceticus RUH2202] gi|299771640|ref|YP_003733666.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. DR1] gi|262257802|gb|EEY76537.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter calcoaceticus RUH2202] gi|298701728|gb|ADI92293.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. DR1] Length = 201 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYETVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQSAKEYGLVDQV 196 >gi|21230439|ref|NP_636356.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769567|ref|YP_244329.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. campestris str. 8004] gi|25008306|sp|Q8PBY6|CLPP_XANCP RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|81304478|sp|Q4URL4|CLPP_XANC8 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|21112001|gb|AAM40280.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574899|gb|AAY50309.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. campestris str. 8004] Length = 208 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 23/173 (13%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + ++ ++ + D+ + + ++SPGG AG AI+ +Q +K Sbjct: 36 LIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS L++ A+ A S V + + + + Sbjct: 95 -VSTICVGQAASMGALLLASGAAGKRYALPNSRV------MIHQPLGGFQGQATDIDIHA 147 Query: 153 KSVKS--SPMKAEPSPFSEVN------PKAVQMMQDVVDSSYHWFVRLVSESR 197 + + + S + + + + + VD+ + V V E R Sbjct: 148 REILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDHVLERR 200 >gi|257899073|ref|ZP_05678726.1| serine protease [Enterococcus faecium Com15] gi|257836985|gb|EEV62059.1| serine protease [Enterococcus faecium Com15] Length = 241 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 77/206 (37%), Gaps = 37/206 (17%) Query: 39 ARIAIRGQI-----EDSQELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 A + I G+I +D+ ++ + + + + ++SPGGS + G AI +++ Sbjct: 16 ADVFIFGEIVSFKWDDTDTTAASFQKDLKELGEVSQINLHINSPGGSVFEGIAIGNMLRQ 75 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K R V+ V +AAS +I + + ++ E S+ L + + Sbjct: 76 HKAR--VVAHVDALAASIASVIVASCDEVIMPENSM------LMIH------------NP 115 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++ K + ++ + V L + +K + D Sbjct: 116 WTISMGNAKE----LRKQADDLDKIAESSV------VTYLAKAGEKLTEEKIKQIMDEET 165 Query: 213 W-TGAEAKKVGLIDVVGGQEEVWQSL 237 W + EA GL DVV +V S+ Sbjct: 166 WMSAQEAYNYGLCDVVESANQVAASI 191 >gi|69249001|ref|ZP_00604844.1| Peptidase S14, ClpP [Enterococcus faecium DO] gi|227550370|ref|ZP_03980419.1| endopeptidase Clp [Enterococcus faecium TX1330] gi|257879589|ref|ZP_05659242.1| peptidase S14 [Enterococcus faecium 1,230,933] gi|257882608|ref|ZP_05662261.1| peptidase S14 [Enterococcus faecium 1,231,502] gi|257885031|ref|ZP_05664684.1| peptidase S14 [Enterococcus faecium 1,231,501] gi|257888403|ref|ZP_05668056.1| peptidase S14 [Enterococcus faecium 1,141,733] gi|257890257|ref|ZP_05669910.1| peptidase S14 [Enterococcus faecium 1,231,410] gi|257893441|ref|ZP_05673094.1| peptidase S14 [Enterococcus faecium 1,231,408] gi|257897223|ref|ZP_05676876.1| peptidase S14 [Enterococcus faecium Com12] gi|257899224|ref|ZP_05678877.1| peptidase S14 [Enterococcus faecium Com15] gi|258616800|ref|ZP_05714570.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecium DO] gi|260559746|ref|ZP_05831926.1| peptidase S14 [Enterococcus faecium C68] gi|261207321|ref|ZP_05922008.1| peptidase S14 [Enterococcus faecium TC 6] gi|289566520|ref|ZP_06446943.1| Clp protease [Enterococcus faecium D344SRF] gi|293377995|ref|ZP_06624173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium PC4.1] gi|293557243|ref|ZP_06675791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1039] gi|293559757|ref|ZP_06676278.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1162] gi|293567607|ref|ZP_06678951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1071] gi|293570370|ref|ZP_06681427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E980] gi|294616541|ref|ZP_06696319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1636] gi|294618382|ref|ZP_06697960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1679] gi|294623239|ref|ZP_06702110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium U0317] gi|314938917|ref|ZP_07846184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a04] gi|314943860|ref|ZP_07850593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133C] gi|314948100|ref|ZP_07851501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0082] gi|314951634|ref|ZP_07854679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133A] gi|314993860|ref|ZP_07859194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133B] gi|314996702|ref|ZP_07861725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a01] gi|68194308|gb|EAN08823.1| Peptidase S14, ClpP [Enterococcus faecium DO] gi|227180509|gb|EEI61481.1| endopeptidase Clp [Enterococcus faecium TX1330] gi|257813817|gb|EEV42575.1| peptidase S14 [Enterococcus faecium 1,230,933] gi|257818266|gb|EEV45594.1| peptidase S14 [Enterococcus faecium 1,231,502] gi|257820883|gb|EEV48017.1| peptidase S14 [Enterococcus faecium 1,231,501] gi|257824457|gb|EEV51389.1| peptidase S14 [Enterococcus faecium 1,141,733] gi|257826617|gb|EEV53243.1| peptidase S14 [Enterococcus faecium 1,231,410] gi|257829820|gb|EEV56427.1| peptidase S14 [Enterococcus faecium 1,231,408] gi|257833788|gb|EEV60209.1| peptidase S14 [Enterococcus faecium Com12] gi|257837136|gb|EEV62210.1| peptidase S14 [Enterococcus faecium Com15] gi|260074414|gb|EEW62736.1| peptidase S14 [Enterococcus faecium C68] gi|260078381|gb|EEW66085.1| peptidase S14 [Enterococcus faecium TC 6] gi|289161674|gb|EFD09551.1| Clp protease [Enterococcus faecium D344SRF] gi|291589708|gb|EFF21512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1071] gi|291590588|gb|EFF22319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1636] gi|291595359|gb|EFF26674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1679] gi|291597346|gb|EFF28526.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium U0317] gi|291600607|gb|EFF30911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1039] gi|291606305|gb|EFF35718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E1162] gi|291609548|gb|EFF38813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium E980] gi|292643360|gb|EFF61492.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium PC4.1] gi|313589140|gb|EFR67985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a01] gi|313591670|gb|EFR70515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133B] gi|313596230|gb|EFR75075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133A] gi|313597478|gb|EFR76323.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133C] gi|313641791|gb|EFS06371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0133a04] gi|313645436|gb|EFS10016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecium TX0082] Length = 197 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AI+ + VK Sbjct: 29 IIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGMAIYDTMNFVKAD- 87 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V MAAS G + A G F P + + + Sbjct: 88 -VQTIVMGMAASMGSFLLTAGTK------------GKRFALPNAEIMIHQ---------- 124 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 P+ +E+ A ++Q + ++++E P + +D + T Sbjct: 125 -PLGGAQGQATEIEIAARHILQ-----TRERLNKILAERTGQPLEVIEKDTDRDNYMTAE 178 Query: 217 EAKKVGLIDVV 227 +AK GLID V Sbjct: 179 QAKAYGLIDEV 189 >gi|51891657|ref|YP_074348.1| hypothetical protein STH519 [Symbiobacterium thermophilum IAM 14863] gi|51855346|dbj|BAD39504.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 425 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Query: 26 SWSSHVEDNSPHVARIAIR-GQIED---SQELIERIERISRDDSATALIVSLSSPGGSAY 81 + + E+ S V + I GQ+ D +Q + D A A+ V L +PGG Sbjct: 6 APGARAENGSGKVYVLRIDNGQVIDPGLAQFADRVFDEAGADPDAVAIAVVLDTPGGYVE 65 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + I + N I V A SAG LI+ A+ + +++G Sbjct: 66 SAARIKDRLLHPPNGLKTIAYVENDAVSAGALIATAAEYLFMHPGAVIG 114 >gi|302386512|ref|YP_003822334.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1] gi|302197140|gb|ADL04711.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1] Length = 260 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 83/230 (36%), Gaps = 55/230 (23%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 N + I I G++E + ++ ++ I DDS L+V L++ GG Sbjct: 59 NANKRKIHLITIIGEVEGHENLSGNSKATKYDHILPKLAEIEDDDSVEGLLVLLNTSGGD 118 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 AG AI I + P ++ V + S G ++ ++ T G + +P Sbjct: 119 VDAGLAIAEMIASLS--IPTVSLVLGGSHSIGVPLAVCTDYSFIVPT------GTMMIHP 170 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 V + + + +M+QD + + VS I Sbjct: 171 ----------VRMTGMVIGA---------SQTYEYFEMIQDRI-------LSFVSNHAKI 204 Query: 200 PYDKTLVLS---------DGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 YD+ L G + G E K GLI+ VGG ++ + LY L Sbjct: 205 AYDQLKRLMLNTEMLTRDLGTVLVGEETVKEGLINEVGGIKDALKKLYEL 254 >gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Phascolarctobacterium sp. YIT 12067] gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Phascolarctobacterium sp. YIT 12067] Length = 197 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I+D + +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPGGSVSAGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS A L++ + A S V + + + Sbjct: 88 -VSTICMGMAASMASVLLAAGAPGKRFALPYSRV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + +++++ +K ++ + T Sbjct: 134 -----------------TEIEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLT 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 SKEAKEYGLIDEV 189 >gi|170754867|ref|YP_001781951.1| Clp protease [Clostridium botulinum B1 str. Okra] gi|169120079|gb|ACA43915.1| clp protease [Clostridium botulinum B1 str. Okra] Length = 230 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 86/248 (34%), Gaps = 59/248 (23%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVS 72 F ++ + + + I GQIE + LI ++ + + + Sbjct: 17 FGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKEVEGVFII 76 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS----- 127 L++ GG AG AI I+ + KP ++ V S G ++ +++ + T+ Sbjct: 77 LNTVGGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVH 134 Query: 128 ------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 L+ IGV + Y +++ + S K + F + + + Sbjct: 135 PIRMNGLI--IGVPQTFEYFNKMQERI-IEFIVRTSKISKEKLKEFMLQSDE-------L 184 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G I G +A + G+I+ VGG +E L L Sbjct: 185 LNDM------------------------GTILIGKQAVESGIINEVGGVKEALDKLNNLI 220 Query: 242 VDQSIRKI 249 ++ + Sbjct: 221 DEKQKENV 228 >gi|327439480|dbj|BAK15845.1| protease subunit of ATP-dependent Clp protease [Solibacillus silvestris StLB046] Length = 245 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 45/201 (22%) Query: 33 DNSPHVARIAIRGQIEDS--------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 D V+ + I G I +S ++ +++ +D ++V L+SPGGSA+ G Sbjct: 28 DEEKGVSELTIYGDIGESWFWDSTSAVDVDNALKQAGTND----IVVRLNSPGGSAFDGI 83 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AI+ +++ + V V A SA +I+ A + ++ G + Sbjct: 84 AIYNRLKE--HPGKVTIHVDGWACSAASIIAMAGDEVIMG-------TGAMMMIHEASN- 133 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + ++ + D+++ V + I ++ Sbjct: 134 ----------IVWG------------TKNDMRKVADMLEELEAGIVDVYMTKAKISREEI 171 Query: 205 LVLSDGRIW-TGAEAKKVGLI 224 + W + +A ++G Sbjct: 172 TEQMNAETWFSALKAVEIGFA 192 >gi|332992307|gb|AEF02362.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp. SN2] Length = 209 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 72/194 (37%), Gaps = 35/194 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ + +K Sbjct: 38 VIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + S V + + F + S + Sbjct: 97 -VSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRV------MIHQPLGGFQGQA--SDFEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K S + + ++ V+ D+ L + Sbjct: 148 HA---KEILSI--------KEKLNRLMAQHTGQDYEKVAH----DTDRDNFL------SA 186 Query: 216 AEAKKVGLIDVVGG 229 EAK+ GLID V Sbjct: 187 TEAKEYGLIDQVMT 200 >gi|6723207|dbj|BAA89612.1| capsid protein [Bacteriophage WO] Length = 123 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 Query: 236 S 236 Sbjct: 62 K 62 >gi|332976916|gb|EGK13738.1| translocation-enhancing protein TepA [Desmospora sp. 8437] Length = 257 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 43/196 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I ++ + +I+ L++ GG AG A+ I + KP ++ V S Sbjct: 82 EHVIPQIVAAEQNRNIEGVIIILNTVGGDVEAGLALAEMIASMS--KPTVSLVLGGGHSI 139 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++I AET+ + +P V + + Sbjct: 140 GVPIAVSADISFIAETA------TMTVHP----------VRLTGLVVGV---------PQ 174 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + ++ MQD V +R VS+ NI ++ L G + GA+A K Sbjct: 175 TFEYMEKMQDRV-------IRFVSDHSNIGEERFRELMFRTGELARDIGTNVIGADAVKY 227 Query: 222 GLIDVVGGQEEVWQSL 237 GLID VGG E L Sbjct: 228 GLIDRVGGLAEALGEL 243 >gi|153853239|ref|ZP_01994648.1| hypothetical protein DORLON_00633 [Dorea longicatena DSM 13814] gi|149754025|gb|EDM63956.1| hypothetical protein DORLON_00633 [Dorea longicatena DSM 13814] Length = 250 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 94/243 (38%), Gaps = 51/243 (20%) Query: 26 SWSSHVEDNSPH--VARIAIRGQIEDSQE------------LIERIERISRDDSATALIV 71 + S+++E + + + + I G+IE + L+ + + L++ Sbjct: 35 TGSANLEGSRDNHRIKLLTIVGEIEGHEAVSGNTKATKYEHLLPMLAEVEDSSKIDGLLI 94 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGS 131 L++ GG AG +I I + KP ++ V + S G ++ +++ + + Sbjct: 95 LLNTLGGDVEAGLSIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSADYSFIVPSGTM-- 150 Query: 132 IGVL------FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 V+ + V+ LD + + + S S + + ++ + +++ Sbjct: 151 --VIHPVRSNGMFIGVQQSLDNMIRTQDRIT-----RFLSEHSSMKQERIEEL--MLN-- 199 Query: 186 YHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 P + + G + G +A + GLID VGG + L+ + D++ Sbjct: 200 --------------PTELVKDV--GTLLEGKDAVREGLIDAVGGLSDALNKLHEMISDRN 243 Query: 246 IRK 248 +K Sbjct: 244 QKK 246 >gi|307258170|ref|ZP_07539920.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863355|gb|EFM95288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 675 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 92/273 (33%), Gaps = 51/273 (18%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ S + A I+I +I +Q+ ++ + + + + + SPGGS + G A Sbjct: 16 DIKAKSNNQAEISIYDEIGGWGVSAQQFATDLKALG--SNIKQIDLHIHSPGGSVFDGIA 73 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 IF ++ K + +AAS +I+ N ++ E ++ + + Sbjct: 74 IFNLLKNHPANK--TVYIDGLAASMASVIAMVGNKVIMPENAM------MMIH------- 118 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 ++ + D++D + + ++ Sbjct: 119 -----KPWGIQGGDADDM------------RKYADLLDKLEATLIPAYASKTGKTEEELA 161 Query: 206 VLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDW----NPPKNYWF 260 + W G EA + G D + + + + ++++D+ N KN F Sbjct: 162 QMLAVETWMNGKEAVEQGFADELAEPVQAMAQIQS-------KRLEDYKNMPNSLKNMLF 214 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLWAVWNP 293 N ++ ++ P + + + P Sbjct: 215 KPQGNAG-ATPAQNVTPAAQPVAEPAVNQMNTP 246 >gi|114331459|ref|YP_747681.1| peptidase S14, ClpP [Nitrosomonas eutropha C91] gi|114308473|gb|ABI59716.1| peptidase S14, ClpP [Nitrosomonas eutropha C91] Length = 228 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 35/166 (21%) Query: 65 SATALI--VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIV 122 + A + + ++SPGG ++ AI AI++ + VI + +AASA I+ A++ IV Sbjct: 39 AIKAPVIHLRINSPGGDVFSARAIETAIREHNSE--VIAHIDGVAASAASYIALAADNIV 96 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 AE + + + A + + M ++ Sbjct: 97 IAEGA------------------------FYMIHKAWSFAMGN------ADDLLEMAALL 126 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + V ++ D+ W + AEA + G D V Sbjct: 127 EKVDESLVTTYAKRTGQAEDQIRDWMRNETWFSAAEAVEYGFADSV 172 >gi|170760538|ref|YP_001788551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A3 str. Loch Maree] gi|226706446|sp|B1L1D7|CLPP_CLOBM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|169407527|gb|ACA55938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum A3 str. Loch Maree] Length = 194 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 75/196 (38%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + ++ D+ ++ ++ + +D + + ++SPGGS +G AI+ +Q +K Sbjct: 29 IIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L+ + A S V + + +G+ Sbjct: 88 -VSTICVGMAASMGAFLLVAGAKGKRYALPNSEV------MIHQPLGGFQGQATDIGIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + K + + ++ S+ P ++ + ++ Sbjct: 141 ERIL----------------KMKKKLNTIL-----------SDRTGKPLEQVELDTERDH 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 174 FLSAEEAKEYGLIDEV 189 >gi|28897691|ref|NP_797296.1| ATP-dependent Clp protease proteolytic subunit [Vibrio parahaemolyticus RIMD 2210633] gi|260898290|ref|ZP_05906786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus Peru-466] gi|308094762|ref|ZP_05891792.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus AN-5034] gi|31340006|sp|Q87R80|CLPP_VIBPA RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|28805904|dbj|BAC59180.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio parahaemolyticus RIMD 2210633] gi|308088425|gb|EFO38120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus Peru-466] gi|308093191|gb|EFO42886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio parahaemolyticus AN-5034] Length = 200 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 74/198 (37%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 34 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 90 Query: 98 PVI--TEVHEMAASAGYLIS-CASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ A+ S V + + + + Sbjct: 91 PNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 144 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + +++ +E P + +D R Sbjct: 145 AQEILT----------------IKQKLNNLL-----------AEHTGQPLEVIERDTD-R 176 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + G++D V Sbjct: 177 DNFMSAEQAVEYGIVDAV 194 >gi|261209157|ref|ZP_05923553.1| serine protease [Enterococcus faecium TC 6] gi|289566715|ref|ZP_06447130.1| serine protease [Enterococcus faecium D344SRF] gi|260076870|gb|EEW64601.1| serine protease [Enterococcus faecium TC 6] gi|289161485|gb|EFD09370.1| serine protease [Enterococcus faecium D344SRF] Length = 241 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 77/206 (37%), Gaps = 37/206 (17%) Query: 39 ARIAIRGQI-----EDSQELIERIER-ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 A + I G+I +D+ ++ + + + + ++SPGGS + G AI +++ Sbjct: 16 ADVFIFGEIVSFKWDDTDTTAASFQKDLKELGEVSQINLHINSPGGSVFEGIAIGNMLRQ 75 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K R V+ V +AAS +I + + ++ E S+ L + + Sbjct: 76 HKAR--VVAHVDALAASIASVIVASCDEVIMPENSM------LMIH------------NP 115 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 ++ K + ++ + V L + +K + D Sbjct: 116 WTISMGNAKE----LRKQADDLDKIAESSV------VTYLAKAGEKLTEEKIKQIMDEET 165 Query: 213 W-TGAEAKKVGLIDVVGGQEEVWQSL 237 W + EA GL DVV +V S+ Sbjct: 166 WMSAQEAYNYGLCDVVESANQVAASI 191 >gi|59711403|ref|YP_204179.1| ATP-dependent Clp protease proteolytic subunit [Vibrio fischeri ES114] gi|197335304|ref|YP_002155557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio fischeri MJ11] gi|67460143|sp|Q5E6Q5|CLPP_VIBF1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706555|sp|B5FBZ8|CLPP_VIBFM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|59479504|gb|AAW85291.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases [Vibrio fischeri ES114] gi|197316794|gb|ACH66241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio fischeri MJ11] Length = 207 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 74/203 (36%), Gaps = 47/203 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + + ++ +E P + +D R Sbjct: 153 AQEILT----------------IKKKLNTLL-----------AEHTGQPLEVIEQDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVVGGQEE 232 + +A K GL+D V + + Sbjct: 185 DNFMSADDAVKYGLVDAVLNKRD 207 >gi|52145328|gb|AAU29368.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E + Sbjct: 5 LQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAIEIGLADGVTTFFEFINNH 63 Query: 238 YALGVDQSIRKIKD 251 + V + ++ + Sbjct: 64 KSRSVSMTTNELTE 77 >gi|268316858|ref|YP_003290577.1| hypothetical protein Rmar_1299 [Rhodothermus marinus DSM 4252] gi|262334392|gb|ACY48189.1| protein of unknown function DUF114 [Rhodothermus marinus DSM 4252] Length = 277 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IED++E+ + I D A + + + +PGG A E I A+ + + V V Sbjct: 64 SIEDAEEV---LRAIRLTDPACPIDMIVHTPGGLVLAAEQIAWALAQHPAK--VTVFVPH 118 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G L++ A++ IV +++G Sbjct: 119 YAMSGGTLLALAADEIVMDPFAVLG 143 >gi|228955763|ref|ZP_04117752.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803918|gb|EEM50548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 234 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 37/181 (20%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ ++++ + +D LIVS++SPGG G I+ A++ V ++ +AASA Sbjct: 8 KITKQLDNANSED----LIVSINSPGGYVDEGSEIYTALKNYPGH--VEVQIVGLAASAA 61 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +I+ A + + + T+ + + G + + Sbjct: 62 SVIAMAGDKVRISPTAKI----------MIHNAAKWHG--------GDHRDMEKAAEMLK 103 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQ 230 ++ V S ++ L + W G +A + D + Sbjct: 104 ITDRAIVNAYVIKS------------GKSEEELLNMMAEETWMGPQQALENNFADEIMFM 151 Query: 231 E 231 E Sbjct: 152 E 152 >gi|294627913|ref|ZP_06706492.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597827|gb|EFF41985.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 208 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 23/173 (13%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + ++ ++ + D+ + + ++SPGG AG AI+ +Q +K Sbjct: 36 LIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS L++ A+ A S V + + + + Sbjct: 95 -VSTICVGQAASMGALLLASGAAGKRYALPNSRV------MIHQPLGGFQGQATDIDIHA 147 Query: 153 KSVKS--SPMKAEPSPFSEVN------PKAVQMMQDVVDSSYHWFVRLVSESR 197 + + + S + + + + + VD+ + V V E R Sbjct: 148 REILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLERR 200 >gi|148380363|ref|YP_001254904.1| Clp protease [Clostridium botulinum A str. ATCC 3502] gi|153932771|ref|YP_001384583.1| Clp protease [Clostridium botulinum A str. ATCC 19397] gi|153934679|ref|YP_001388099.1| Clp protease [Clostridium botulinum A str. Hall] gi|153941144|ref|YP_001391706.1| Clp protease [Clostridium botulinum F str. Langeland] gi|168180713|ref|ZP_02615377.1| clp protease [Clostridium botulinum NCTC 2916] gi|170759121|ref|YP_001787719.1| Clp protease [Clostridium botulinum A3 str. Loch Maree] gi|226949761|ref|YP_002804852.1| Clp protease family protein [Clostridium botulinum A2 str. Kyoto] gi|148289847|emb|CAL83955.1| translocation-enhancing protein TepA [Clostridium botulinum A str. ATCC 3502] gi|152928815|gb|ABS34315.1| Clp protease family protein [Clostridium botulinum A str. ATCC 19397] gi|152930593|gb|ABS36092.1| Clp protease family protein [Clostridium botulinum A str. Hall] gi|152937040|gb|ABS42538.1| clp protease [Clostridium botulinum F str. Langeland] gi|169406110|gb|ACA54521.1| Clp protease family protein [Clostridium botulinum A3 str. Loch Maree] gi|182668575|gb|EDT80554.1| clp protease [Clostridium botulinum NCTC 2916] gi|226841950|gb|ACO84616.1| Clp protease family protein [Clostridium botulinum A2 str. Kyoto] gi|295319734|gb|ADG00112.1| clp protease [Clostridium botulinum F str. 230613] gi|322806674|emb|CBZ04243.1| translocation-enhancing protein TepA [Clostridium botulinum H04402 065] Length = 230 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 86/248 (34%), Gaps = 59/248 (23%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVS 72 F ++ + + + I GQIE + LI ++ + + + Sbjct: 17 FGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKEVEGVFII 76 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS----- 127 L++ GG AG AI I+ + KP ++ V S G ++ +++ + T+ Sbjct: 77 LNTVGGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVH 134 Query: 128 ------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 L+ IGV + Y +++ + S K + F + + + Sbjct: 135 PIRMNGLI--IGVPQTFEYFNKMQERI-IEFIVRTSKISKEKLKEFMLQSDE-------L 184 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 ++ G I G +A + G+I+ VGG +E L L Sbjct: 185 LNDM------------------------GTILIGKQAVESGIINEVGGVKEALDKLNNLI 220 Query: 242 VDQSIRKI 249 ++ + Sbjct: 221 DEKQKEDV 228 >gi|138894799|ref|YP_001125252.1| translocation-enhancing protein [Geobacillus thermodenitrificans NG80-2] gi|196247576|ref|ZP_03146278.1| peptidase S14 ClpP [Geobacillus sp. G11MC16] gi|134266312|gb|ABO66507.1| Translocation-enhancing protein [Geobacillus thermodenitrificans NG80-2] gi|196212360|gb|EDY07117.1| peptidase S14 ClpP [Geobacillus sp. G11MC16] Length = 245 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 51/203 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L+V L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLS--KPTVSVVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ + N ET+ + +P + + + Sbjct: 126 GVPIAVSCNYSFITETA------TMTIHP----------IRLTGLVIGV---------PQ 160 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GAE 217 + + MQ+ V VR V++ NI +K L +++ G + Sbjct: 161 TFEYLDKMQERV-------VRFVTKHSNISEEKFKEL----MFSKGNLTRDIGTNVIGPD 209 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A + GLID VGG + L L Sbjct: 210 AVQYGLIDEVGGVSQAMAKLRQL 232 >gi|29375364|ref|NP_814518.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis V583] gi|227517733|ref|ZP_03947782.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis TX0104] gi|229546606|ref|ZP_04435331.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis TX1322] gi|229548713|ref|ZP_04437438.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis ATCC 29200] gi|255971227|ref|ZP_05421813.1| peptidase S14 [Enterococcus faecalis T1] gi|255973850|ref|ZP_05424436.1| peptidase S14 [Enterococcus faecalis T2] gi|256617656|ref|ZP_05474502.1| peptidase S14 [Enterococcus faecalis ATCC 4200] gi|256761537|ref|ZP_05502117.1| peptidase S14 [Enterococcus faecalis T3] gi|256957363|ref|ZP_05561534.1| peptidase S14 [Enterococcus faecalis DS5] gi|256959901|ref|ZP_05564072.1| peptidase S14 [Enterococcus faecalis Merz96] gi|256964395|ref|ZP_05568566.1| peptidase S14 [Enterococcus faecalis HIP11704] gi|257083692|ref|ZP_05578053.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis Fly1] gi|257086127|ref|ZP_05580488.1| peptidase S14 [Enterococcus faecalis D6] gi|257089198|ref|ZP_05583559.1| peptidase S14 [Enterococcus faecalis CH188] gi|257415340|ref|ZP_05592334.1| peptidase S14 [Enterococcus faecalis AR01/DG] gi|257418377|ref|ZP_05595371.1| peptidase S14 [Enterococcus faecalis T11] gi|257421026|ref|ZP_05598016.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis X98] gi|293384732|ref|ZP_06630586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis R712] gi|293387456|ref|ZP_06632008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis S613] gi|294781490|ref|ZP_06746829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis PC1.1] gi|300859735|ref|ZP_07105823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TUSoD Ef11] gi|307269823|ref|ZP_07551153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX4248] gi|307272582|ref|ZP_07553835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0855] gi|307276252|ref|ZP_07557380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX2134] gi|307284467|ref|ZP_07564629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0860] gi|307289536|ref|ZP_07569481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0109] gi|307296208|ref|ZP_07576036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0411] gi|312900365|ref|ZP_07759676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0470] gi|312904208|ref|ZP_07763370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0635] gi|312908569|ref|ZP_07767512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis DAPTO 512] gi|312910494|ref|ZP_07769339.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis DAPTO 516] gi|312951861|ref|ZP_07770750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0102] gi|60389766|sp|Q837R0|CLPP_ENTFA RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|29342824|gb|AAO80588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis V583] gi|227074814|gb|EEI12777.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis TX0104] gi|229306150|gb|EEN72146.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis ATCC 29200] gi|229308263|gb|EEN74250.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis TX1322] gi|255962245|gb|EET94721.1| peptidase S14 [Enterococcus faecalis T1] gi|255966722|gb|EET97344.1| peptidase S14 [Enterococcus faecalis T2] gi|256597183|gb|EEU16359.1| peptidase S14 [Enterococcus faecalis ATCC 4200] gi|256682788|gb|EEU22483.1| peptidase S14 [Enterococcus faecalis T3] gi|256947859|gb|EEU64491.1| peptidase S14 [Enterococcus faecalis DS5] gi|256950397|gb|EEU67029.1| peptidase S14 [Enterococcus faecalis Merz96] gi|256954891|gb|EEU71523.1| peptidase S14 [Enterococcus faecalis HIP11704] gi|256991722|gb|EEU79024.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis Fly1] gi|256994157|gb|EEU81459.1| peptidase S14 [Enterococcus faecalis D6] gi|256998010|gb|EEU84530.1| peptidase S14 [Enterococcus faecalis CH188] gi|257157168|gb|EEU87128.1| peptidase S14 [Enterococcus faecalis ARO1/DG] gi|257160205|gb|EEU90165.1| peptidase S14 [Enterococcus faecalis T11] gi|257162850|gb|EEU92810.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis X98] gi|291077982|gb|EFE15346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis R712] gi|291083107|gb|EFE20070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis S613] gi|294451420|gb|EFG19883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis PC1.1] gi|295114015|emb|CBL32652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterococcus sp. 7L76] gi|300850553|gb|EFK78302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TUSoD Ef11] gi|306496082|gb|EFM65664.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0411] gi|306499497|gb|EFM68869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0109] gi|306503144|gb|EFM72398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0860] gi|306507052|gb|EFM76194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX2134] gi|306510867|gb|EFM79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0855] gi|306513933|gb|EFM82535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX4248] gi|310625455|gb|EFQ08738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis DAPTO 512] gi|310630159|gb|EFQ13442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0102] gi|310632304|gb|EFQ15587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0635] gi|311289190|gb|EFQ67746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis DAPTO 516] gi|311292553|gb|EFQ71109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0470] gi|315025732|gb|EFT37664.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX2137] gi|315029868|gb|EFT41800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX4000] gi|315031465|gb|EFT43397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0017] gi|315036148|gb|EFT48080.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0027] gi|315145272|gb|EFT89288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX2141] gi|315148132|gb|EFT92148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX4244] gi|315151531|gb|EFT95547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0012] gi|315153193|gb|EFT97209.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0031] gi|315154911|gb|EFT98927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0043] gi|315160005|gb|EFU04022.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0312] gi|315161970|gb|EFU05987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0645] gi|315164639|gb|EFU08656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX1302] gi|315166938|gb|EFU10955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX1341] gi|315170665|gb|EFU14682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX1342] gi|315174680|gb|EFU18697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX1346] gi|315573467|gb|EFU85658.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0309B] gi|315578035|gb|EFU90226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0630] gi|315581428|gb|EFU93619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis TX0309A] gi|323479964|gb|ADX79403.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus faecalis 62] gi|327534358|gb|AEA93192.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis OG1RF] gi|329577643|gb|EGG59074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Enterococcus faecalis TX1467] Length = 197 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 37/201 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + DS + + ++SPGGS AG AIF + VK Sbjct: 29 IIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKAD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V MAAS G + A A + + + + + Sbjct: 88 -VQTIVLGMAASMGSFLLTAGQKGKRFALPNAE------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + + +++E P + +D + T Sbjct: 134 -----------------TEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMT 176 Query: 215 GAEAKKVGLIDVVGGQEEVWQ 235 +AK+ GLID V Sbjct: 177 AEQAKEYGLIDEVMENSSALN 197 >gi|329929297|ref|ZP_08283050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Paenibacillus sp. HGF5] gi|328936666|gb|EGG33109.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Paenibacillus sp. HGF5] Length = 258 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 57/252 (22%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRD 63 + VT T+ + +V + I GQIE + +I ++ ++ Sbjct: 33 AAVTETIQQLGQTGLPTGGESNVFCMTIIGQIEGHLVLPPQNKTTKYEHMIPQLVAAEQN 92 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IV 122 L++ L++ GG AG AI I + KP +T V S G I+ A++ I+ Sbjct: 93 PRIEGLLIILNTVGGDVEAGLAIAEMIASLS--KPTVTVVIGGGHSIGVPIAVAADHSII 150 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ I + + +GV + ++ MQ+ V Sbjct: 151 AESATMT--IHPIRM----SGLV--IGV------------------PQTFEYMEKMQERV 184 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEV 233 VR V+ I ++ L G + +G +A K GL++ VGG + Sbjct: 185 -------VRFVTSHSGITEEQFKDLMFKTGELNRDIGTAVSGTDAVKYGLMNEVGGIGQA 237 Query: 234 WQSLYALGVDQS 245 L ++ ++ Sbjct: 238 LSRLNSMIAERK 249 >gi|315641411|ref|ZP_07896485.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus italicus DSM 15952] gi|315482847|gb|EFU73369.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus italicus DSM 15952] Length = 194 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 70/194 (36%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AI+ + VK Sbjct: 29 IIMLSGQVTDDLANSIISQLLFLDAQDSEKDIYLYINSPGGSVTAGLAIYDTMNFVKAD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V MAAS G + A A + + + + + Sbjct: 88 -VQTIVMGMAASMGSFLLTAGKKGKRFALPNAE------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 +++ + + +++E P + +D R Sbjct: 134 -----------------TEIEIAARHILKTRERLNNILAERTGQPLEVIEKDTD-RDNFM 175 Query: 214 TGAEAKKVGLIDVV 227 T EAK GLID + Sbjct: 176 TAQEAKDYGLIDQI 189 >gi|256617098|ref|ZP_05473944.1| peptidase S14 [Enterococcus faecalis ATCC 4200] gi|256596625|gb|EEU15801.1| peptidase S14 [Enterococcus faecalis ATCC 4200] Length = 198 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 33/160 (20%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 + V ++SPGG A I+ +++ V ++ +AASA +I+ A + +V + ++ Sbjct: 7 ITVWINSPGGDCVAAAQIYNMLKEYSGD--VTIKIDGLAASAASVIAMAGDKVVMSPVAM 64 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 + + + +V Q ++D Sbjct: 65 ------MMIH------------NPSTVAFGDRVDM------------QKAMAMLDEVKES 94 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + + K + D W A +G D V Sbjct: 95 IINAYEIKTGMSRTKLAHMMDAETWMDARSAVDLGFADDV 134 >gi|237795844|ref|YP_002863396.1| Clp protease family protein [Clostridium botulinum Ba4 str. 657] gi|229262404|gb|ACQ53437.1| Clp protease family protein [Clostridium botulinum Ba4 str. 657] Length = 226 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 83/239 (34%), Gaps = 59/239 (24%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVS 72 F ++ + + + I GQIE + LI ++ + + + Sbjct: 17 FGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKDVEGVFII 76 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS----- 127 L++ GG AG AI I+ + KP ++ V S G ++ +++ + T+ Sbjct: 77 LNTVGGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVH 134 Query: 128 ------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 L+ IGV + Y +++ + S K + F + + + Sbjct: 135 PIRMNGLI--IGVPQTFEYFNKMQERI-IEFIVRTSKISKEKLKEFMLQSDE-------L 184 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ G I G +A + G+I+ VGG +E L L Sbjct: 185 LNDM------------------------GTILIGKQAVESGIINEVGGVKEALNKLNNL 219 >gi|221234978|ref|YP_002517414.1| ATP-dependent Clp protease proteolytic subunit [Caulobacter crescentus NA1000] gi|220964150|gb|ACL95506.1| ATP-dependent endopeptidase clp, proteolytic subunit ClpP [Caulobacter crescentus NA1000] Length = 213 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 33/200 (16%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 41 IIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKS-- 98 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAAS G L+ A G+ G P + + + S Sbjct: 99 PVSTVCMGMAASMGSLLLAA------------GAAGQRISLPNARIMVHQP--------S 138 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + S E + + + + ++ Y + Y++ D + + Sbjct: 139 GGFRGQASDI-ERHAEDIIKTKRRLNEIY-------VKHCGRTYEEVERTLDRDHFMSAD 190 Query: 217 EAKKVGLIDVVGGQEEVWQS 236 EAK GL+D V + ++ Sbjct: 191 EAKAWGLVDHVYDSRDAAEA 210 >gi|149194680|ref|ZP_01871775.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter mediatlanticus TB-2] gi|149135103|gb|EDM23584.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter mediatlanticus TB-2] Length = 196 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I ++G+I D ++ ++ + ++ + + ++SPGG +G AI+ + +K Sbjct: 30 IIMLQGEINDHTASLIVAQLLFLEAENPEKDIYLYINSPGGVVTSGFAIYDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T AAS +L+S + A + + + +P G + Sbjct: 89 -VVTICMGQAASMGAFLLSSGAKGKRFALPHAR------IMIH---QPLGGAQGQATDI- 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E++ K + M+ ++ ++E+ K ++ + + Sbjct: 138 -------------EIHAKEILRMKKELNKI-------LAENTGQSVRKIEKDTERDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 EA K GLID V Sbjct: 178 AEEAMKYGLIDKV 190 >gi|153955259|ref|YP_001396024.1| Phage-related protease [Clostridium kluyveri DSM 555] gi|219855684|ref|YP_002472806.1| hypothetical protein CKR_2341 [Clostridium kluyveri NBRC 12016] gi|146348117|gb|EDK34653.1| Phage-related protease [Clostridium kluyveri DSM 555] gi|219569408|dbj|BAH07392.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 229 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 43/200 (21%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATA---LIVSLSSPGGSAYAGEAIFRAIQKV 93 + + G I + E+ ++ +D+ + V ++SPGG +A I+ + Sbjct: 17 LYLNGVISEETWWGDEVTPKM---FKDELLAGTGDITVWINSPGGDVFAAAQIYNMLMDY 73 Query: 94 KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK 153 + V ++ +AASA +I+ A + + S+ + + + Sbjct: 74 TGK--VTVKIDGLAASAASVIAMAGGDVYMSPVSM------IMIH------------NPS 113 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 ++ + + + ++D + + K L D W Sbjct: 114 TIAIGD------------SEEMLRAKALLDEVKESIINAYELKTGLSRIKLSHLMDAESW 161 Query: 214 -TGAEAKKVGLIDVVGGQEE 232 +A ++G D + E Sbjct: 162 MNANKAIELGFADKIMFMES 181 >gi|328542278|ref|YP_004302387.1| Periplasmic serine protease [polymorphum gilvum SL003B-26A1] gi|326412027|gb|ADZ69090.1| Periplasmic serine protease [Polymorphum gilvum SL003B-26A1] Length = 280 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 47 IEDSQELIERIERISRDDSAT-ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 + DS+E++ I+ DD +++ +PGG A I RAIQ K + V V Sbjct: 67 VNDSEEVLRAIQ--MTDDEVPLDIVLH--TPGGLVLAATQIARAIQGHKGK--VTVFVPH 120 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV E S++G Sbjct: 121 YAMSGGTLIALAADEIVMCEHSVLG 145 >gi|218891274|ref|YP_002440141.1| ClpP protease [Pseudomonas aeruginosa LESB58] gi|218771500|emb|CAW27267.1| ClpP protease [Pseudomonas aeruginosa LESB58] Length = 296 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 81/251 (32%), Gaps = 41/251 (16%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ ++ + + I D T V+++SPGG + G AI+ +++ K + V + Sbjct: 59 GEGVTAKRIAGALRSIGSDIDVT---VNINSPGGDVFEGLAIYNLLREHKGK--VTVNII 113 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AASA I+ A + I IG +L +G + ++ Sbjct: 114 GLAASAASFIAMAGDEIR---------IGRAAFLMIHNAWLIAMG------NRNDLREIA 158 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGL 223 + Y ++ I D + D W G EA G Sbjct: 159 DWLEP--------FDMTLADIY-------AQRTGIDIDDIVKQMDAETWIGGREAVDKGW 203 Query: 224 IDVVGGQEEVW-----QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 D +E+ +S L + + P++ + + S L Sbjct: 204 ADAFLESDEISSAPSNRSEAILAKRRMDAALARSGMPRSQRNELINDFKTSMLGAAGGGG 263 Query: 279 MKQTKVQGLWA 289 T + G A Sbjct: 264 DTPTDMPGAVA 274 >gi|16126206|ref|NP_420770.1| ATP-dependent Clp protease, proteolytic subunit [Caulobacter crescentus CB15] gi|3688205|emb|CAA09090.1| endopeptidase clp [Caulobacter crescentus CB15] gi|13423424|gb|AAK23938.1| ATP-dependent Clp protease, proteolytic subunit [Caulobacter crescentus CB15] Length = 210 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 33/200 (16%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 38 IIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAAS G L+ A G+ G P + + + S Sbjct: 96 PVSTVCMGMAASMGSLLLAA------------GAAGQRISLPNARIMVHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + S E + + + + ++ Y + Y++ D + + Sbjct: 136 GGFRGQASDI-ERHAEDIIKTKRRLNEIY-------VKHCGRTYEEVERTLDRDHFMSAD 187 Query: 217 EAKKVGLIDVVGGQEEVWQS 236 EAK GL+D V + ++ Sbjct: 188 EAKAWGLVDHVYDSRDAAEA 207 >gi|312882507|ref|ZP_07742248.1| ATP-dependent Clp protease proteolytic subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309369907|gb|EFP97418.1| ATP-dependent Clp protease proteolytic subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 208 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 71/197 (36%), Gaps = 47/197 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + + ++ +E P D +D R Sbjct: 153 AQEILT----------------IKKKLNTLL-----------AEHTGQPLDVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDV 226 + +A + GL+D Sbjct: 185 DNFMSADQAVEYGLVDS 201 >gi|52145330|gb|AAU29369.1| putative capsid protein [Wolbachia phage WO] gi|52145332|gb|AAU29370.1| putative capsid protein [Wolbachia phage WO] gi|284927695|gb|ADC29570.1| putative capsid protein [Wolbachia phage WO] gi|284927697|gb|ADC29571.1| putative capsid protein [Wolbachia phage WO] gi|284927699|gb|ADC29572.1| putative capsid protein [Wolbachia phage WO] gi|284927721|gb|ADC29583.1| putative capsid protein [Wolbachia phage WO] gi|284927723|gb|ADC29584.1| putative capsid protein [Wolbachia phage WO] Length = 115 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +RN+ ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKDWNPPKN 257 + + V + ++ + N + Sbjct: 62 NHKSRSVSMTTDELIEENYRRE 83 >gi|15888940|ref|NP_354621.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium tumefaciens str. C58] gi|21759065|sp|Q8UEX6|CLPP1_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|15156717|gb|AAK87406.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium tumefaciens str. C58] Length = 202 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 69/192 (35%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+++D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVDDTVSALVCAQLLFLEAENPKKPIHLYINSPGGMVTSGFAMYDTMRYIRA-- 90 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEPGTRAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ + SY F + R + Sbjct: 148 RQTKHR------------MTRLYAEHCGRSYEEFETAMDRDRFMTV-------------- 181 Query: 216 AEAKKVGLIDVV 227 EA + GLID + Sbjct: 182 QEALEWGLIDRI 193 >gi|13541323|ref|NP_111011.1| membrane-bound serine protease [Thermoplasma volcanium GSS1] gi|14324706|dbj|BAB59633.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 439 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 4/107 (3%) Query: 28 SSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 + V ++ I + +I+ S +I + + A+++ +++PGG + Sbjct: 25 GNSVATPQKNIVVINLDEEIDAGSANMITSTLSSVSNSTTAAVVIYMNTPGGILENMMQM 84 Query: 87 FRAIQKVKNRKPV---ITEVHEMAASAGYLISCASNIIVAAETSLVG 130 AI V+N+ + V MAASAG ++ A + I S +G Sbjct: 85 VSAISSVENQGIITITYVPVDGMAASAGSYVAMACDYIFMGNGSYIG 131 >gi|282883083|ref|ZP_06291683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus lacrimalis 315-B] gi|300813694|ref|ZP_07094016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297060|gb|EFA89556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus lacrimalis 315-B] gi|300512236|gb|EFK39414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 194 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G++ D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIFASGEVNDTMADLIVAQLLFLESEDPNKDIQLYINSPGGSVSAGLAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS L+S + A S I + + + ++ + + Sbjct: 88 -VSTICIGMAASMGAILLSSGAKGKRFALPNS---DIMIHQPSGGTQGMATDIQITAEKI 143 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT- 214 K + + ++ +++ +K +D W Sbjct: 144 L----------------KTRKSLNQIL-----------AKNTGQKLEKIERDADRDFWLD 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 ANEAKEYGLIDKV 189 >gi|295100235|emb|CBK97780.1| Protease subunit of ATP-dependent Clp proteases [Faecalibacterium prausnitzii L2-6] Length = 410 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 22/118 (18%) Query: 31 VEDNSPHVARIAIRGQIEDSQ------------------ELIERIERISRDDSATALIVS 72 + A I + G+I ++Q E + ++++ +I+ Sbjct: 19 MASTDGQTADITMYGEIVETQPIDWWTDKPIPGQYIIESEFLSDLQQVENCPQ---IIIR 75 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRK-PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + S GG A I ++++ + + V +A S G LI CA + + +SLV Sbjct: 76 MDSLGGDAGVSILIHNRLRELAAKGTKLTCIVDGVAMSGGSLIMCACDTVKVNPSSLV 133 >gi|239826674|ref|YP_002949298.1| peptidase S14 ClpP [Geobacillus sp. WCH70] gi|239806967|gb|ACS24032.1| peptidase S14 ClpP [Geobacillus sp. WCH70] Length = 245 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 53/204 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ + L+V L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNQNIEGLLVILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ + + ET+ + +P + + +GV Sbjct: 126 GVPIAVSCDYSFITETA------TMTIHPVRLTGLV--IGV------------------P 159 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GA 216 + + MQ+ V VR V++ I +K L +++ G Sbjct: 160 QTFEYLDKMQERV-------VRFVTKHSKITEEKFKEL----MFSKGNLTRDIGTNVVGP 208 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 +A K GLID VGG + L L Sbjct: 209 DAVKYGLIDEVGGVAQAMNKLREL 232 >gi|239977100|sp|P0CAU1|CLPP_CAUCR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|239977114|sp|B8GX16|CLPP_CAUCN RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp Length = 209 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 33/200 (16%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 37 IIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKS-- 94 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAAS G L+ A G+ G P + + + S Sbjct: 95 PVSTVCMGMAASMGSLLLAA------------GAAGQRISLPNARIMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + S E + + + + ++ Y + Y++ D + + Sbjct: 135 GGFRGQASDI-ERHAEDIIKTKRRLNEIY-------VKHCGRTYEEVERTLDRDHFMSAD 186 Query: 217 EAKKVGLIDVVGGQEEVWQS 236 EAK GL+D V + ++ Sbjct: 187 EAKAWGLVDHVYDSRDAAEA 206 >gi|291545835|emb|CBL18943.1| Protease subunit of ATP-dependent Clp proteases [Ruminococcus sp. SR1/5] Length = 237 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 90/238 (37%), Gaps = 55/238 (23%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 V + + G+IE + ++ ++ I D+ L++ L++ GG Sbjct: 34 NSRKHKVELLTVIGEIEGHESAPSHSKTTKYEHVLPKLALIEDDEEIEGLLILLNTVGGD 93 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLV-------GS 131 AG AI I + P ++ V S G ++ +++ + ++V G Sbjct: 94 VEAGLAIAEMIASLS--IPTVSLVLGGGHSIGVPMAVSADYSFIVPSATMVVHPVRQNGM 151 Query: 132 -IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 IGV Y ++ D++ A S S + + ++ + ++D+S V Sbjct: 152 FIGVAQSYRNMEKIQDRI------------IAFVSGHSHITAERMEEL--MLDTS--QLV 195 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 + V G + G EA K GLID VGG E LY L + +K Sbjct: 196 KDV----------------GTMLEGEEAVKEGLIDEVGGIREALDRLYTLIERKKTQK 237 >gi|302874673|ref|YP_003843306.1| peptidase S49 [Clostridium cellulovorans 743B] gi|307690713|ref|ZP_07633159.1| peptidase S49 [Clostridium cellulovorans 743B] gi|302577530|gb|ADL51542.1| peptidase S49 [Clostridium cellulovorans 743B] Length = 274 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 55/233 (23%) Query: 29 SHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSP 76 S V +A + I GQIE + +I ++ I +D ++ L++ Sbjct: 23 SEVPGIEERIAILPIIGQIEGHMVAPPQHKTTKYEHIIPQVVGIETNDKIEGALIILNTI 82 Query: 77 GGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS--NIIVAAETSLV----- 129 GG AG AI I + KP ++ V S G ++ A+ + I + T +V Sbjct: 83 GGDVEAGLAIAEMITSIS--KPTVSLVIGGGHSIGVPLATAAKYSYITTSATMIVHPIRM 140 Query: 130 -GS-IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH 187 G+ IGV + Y +++ V S K + F + K +++ D+ Sbjct: 141 NGTVIGVPQTFDYFNKMQERI-VEFVVRTS---KVQRDSFISMMMKTDELLNDM------ 190 Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 G I G +A + GLID VGG + L L Sbjct: 191 ----------------------GTILIGKQAVEKGLIDEVGGIKRALDKLEQL 221 >gi|57237197|ref|YP_178209.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni RM1221] gi|86149593|ref|ZP_01067823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151504|ref|ZP_01069719.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 260.94] gi|86153638|ref|ZP_01071841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597431|ref|ZP_01100666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 84-25] gi|148926357|ref|ZP_01810041.1| ATP-dependent clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|153951283|ref|YP_001397440.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. doylei 269.97] gi|157414501|ref|YP_001481757.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni 81116] gi|205356561|ref|ZP_03223324.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|218561871|ref|YP_002343650.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315123791|ref|YP_004065795.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|9297087|sp|P54413|CLPP_CAMJE RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460171|sp|Q5HWX6|CLPP_CAMJR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166201811|sp|A7H1R0|CLPP_CAMJD RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|172047014|sp|A8FJZ3|CLPP_CAMJ8 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|57166001|gb|AAW34780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni RM1221] gi|85839861|gb|EAQ57120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841851|gb|EAQ59098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 260.94] gi|85842599|gb|EAQ59811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190492|gb|EAQ94466.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 84-25] gi|112359577|emb|CAL34361.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844749|gb|EDK21854.1| ATP-dependent clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|152938729|gb|ABS43470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. doylei 269.97] gi|157385465|gb|ABV51780.1| ATP-dependent clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni 81116] gi|205345566|gb|EDZ32206.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|284925484|gb|ADC27836.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni IA3902] gi|307747143|gb|ADN90413.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni M1] gi|315017513|gb|ADT65606.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315057629|gb|ADT71958.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni S3] gi|315928124|gb|EFV07442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930200|gb|EFV09315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 305] gi|315931999|gb|EFV10952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 327] Length = 194 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 87 -VCTICIGQAASMGAFLLSCGAEGKRFALPNSR------IMIHQPLGGA----------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ K ++ + + Sbjct: 129 -RGQATDI-----EIQAKEILRLKTILNDI-------LAKNTKQKVAKIAKDTERDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 AQEAKEYGLIDKV 188 >gi|261407921|ref|YP_003244162.1| peptidase S14 ClpP [Paenibacillus sp. Y412MC10] gi|261284384|gb|ACX66355.1| peptidase S14 ClpP [Paenibacillus sp. Y412MC10] Length = 258 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 57/252 (22%) Query: 16 SLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRD 63 + VT T+ + +V + I GQIE + +I ++ ++ Sbjct: 33 AAVTETIQQLGQTGLPTGGESNVFCMTIIGQIEGHLVLPPQNKTTKYEHMIPQLVAAEQN 92 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IV 122 L++ L++ GG AG AI I + KP +T V S G I+ A++ I+ Sbjct: 93 PRIEGLLIILNTVGGDVEAGLAIAEMIASLS--KPTVTVVIGGGHSIGVPIAVAADHSII 150 Query: 123 AAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 A ++ I + + +GV + ++ MQ+ V Sbjct: 151 AESATMT--IHPIRM----SGLV--IGV------------------PQTFEYMEKMQERV 184 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEV 233 VR V+ I ++ L G + +GA+A K GL++ VGG + Sbjct: 185 -------VRFVTSHSGITEEQFKDLMFKTGELNRDIGTAVSGADAVKYGLMNEVGGIGQA 237 Query: 234 WQSLYALGVDQS 245 L ++ ++ Sbjct: 238 LSRLNSMIAERK 249 >gi|188590743|ref|YP_001921998.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum E3 str. Alaska E43] gi|251778109|ref|ZP_04821029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226706443|sp|B2UX13|CLPP_CLOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|188501024|gb|ACD54160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum E3 str. Alaska E43] gi|243082424|gb|EES48314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 199 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L+S + A + + + + + + Sbjct: 88 -VSTICVGMAASMGAFLLSSGAKGKRYALPNAE------IMIHQPLGGFQGQATDIQIHA 140 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K + SE + +++++ V+ Sbjct: 141 NRIL--KIKESLNKILSENTNQPLEVIEADVERDN------------------------- 173 Query: 212 IWTGAEAKKVGLIDVV 227 T EAK GL+D V Sbjct: 174 FMTADEAKAYGLVDKV 189 >gi|158520037|ref|YP_001527907.1| hypothetical protein Dole_0020 [Desulfococcus oleovorans Hxd3] gi|158508863|gb|ABW65830.1| protein of unknown function DUF107 [Desulfococcus oleovorans Hxd3] Length = 488 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 6/132 (4%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQELIERIERISRD-DSATA 68 R ++ + ++ + V H V + + G + + ++R D A Sbjct: 3 RLFLIFCLLVSGFFLVAPGPVSAGDAHTVYVVKVAGDVAPG--MAAYLKRALDDIPEAPH 60 Query: 69 --LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +++ L + GG + I I ++ I V A SAG LI+ A N +V Sbjct: 61 QTIVLDLDTFGGRVDSALMIVDLITAADSKGKTIAFVSRKAISAGALIALACNELVMKPG 120 Query: 127 SLVGSIGVLFQY 138 + +G + Sbjct: 121 TTIGDCAPIMVG 132 >gi|262373455|ref|ZP_06066733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter junii SH205] gi|262311208|gb|EEY92294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter junii SH205] Length = 201 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPEKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V+ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAQHSGQDYETVA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAEAAKQYGLVDQV 196 >gi|319649503|ref|ZP_08003659.1| TepA protein [Bacillus sp. 2_A_57_CT2] gi|317398665|gb|EFV79347.1| TepA protein [Bacillus sp. 2_A_57_CT2] Length = 246 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 72/199 (36%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + LI +I I ++ L+V L++ GG AG AI + + KP ++ V S Sbjct: 69 EHLIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAISEMLASLS--KPTVSIVLGGGHSI 126 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ + + AET+ + +P + + + Sbjct: 127 GVPIAVSCDYSFIAETA------TMTIHP----------IRLTGLVIGV----------- 159 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SD--------GRIWTGAEAKKV 221 P+ + M + D + V++ NI K L D G G +A + Sbjct: 160 -PQTFEYMDKMQDRV----INFVTKHSNISEQKFKDLMFDKGNLTRDIGTNVVGRDAVEY 214 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG L L Sbjct: 215 GLIDEVGGVGPALAKLNEL 233 >gi|299535801|ref|ZP_07049122.1| hypothetical protein BFZC1_07248 [Lysinibacillus fusiformis ZC1] gi|298729001|gb|EFI69555.1| hypothetical protein BFZC1_07248 [Lysinibacillus fusiformis ZC1] Length = 442 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 3/140 (2%) Query: 9 KTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSAT 67 K R + LV ++ S V + I ++E +ER + + +++A Sbjct: 3 KRRILSYLLVIWMTFLLAFPLTSAFASNKVYHVLIHNEVERGLHAFLERAFKEAEENNAE 62 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+I+ + +PGG A I + + R I +++ A SAG ++ ++ I Sbjct: 63 AIILEIHTPGGFVNAANDIAMLMDATQIR--TIAYINKDAHSAGAFLALHADEIYMVPNG 120 Query: 128 LVGSIGVLFQYPYVKPFLDK 147 +G+ V+ Sbjct: 121 TIGAAAVIDSAGNAADLKAN 140 >gi|116072309|ref|ZP_01469576.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. BL107] gi|116064831|gb|EAU70590.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. BL107] Length = 184 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AIF IQ VK+ V+T +AAS Sbjct: 28 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIFDTIQYVKSE--VVTICVGLAAS 85 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + VA S + ++ Q + I++ + MK + Sbjct: 86 MGAFLLAAGTKGKRVALPHSRI----MIHQPLGGTSRRQASDIEIEAREILRMKDMLNHS 141 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++++ + + ++ D Y + EA GLID Sbjct: 142 LADMSGQTFEKIEKDTDRDY-------------------------FLSAQEAMDYGLIDR 176 Query: 227 V 227 V Sbjct: 177 V 177 >gi|229110059|ref|ZP_04239636.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock1-15] gi|228673412|gb|EEL28679.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock1-15] Length = 234 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 37/181 (20%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ ++++ + +D LIVS++SPGG G I+ A++ V ++ +AASA Sbjct: 8 KITKQLDNANSED----LIVSINSPGGYVDEGSEIYTALKNYPGH--VEVQIVGLAASAA 61 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +I+ A + + + T+ + + G + + Sbjct: 62 SVIAMAGDKVRISPTAKI----------MIHNAAKWHG--------GDHRDMEKAAEMLK 103 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG-AEAKKVGLIDVVGGQ 230 ++ V S ++ L + W G +A + D + Sbjct: 104 ITDRAIVNAYVIKS------------GKSEEELLNMMAEETWMGPQQALENNFADEIMFM 151 Query: 231 E 231 E Sbjct: 152 E 152 >gi|323144789|ref|ZP_08079363.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Succinatimonas hippei YIT 12066] gi|322415435|gb|EFY06195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Succinatimonas hippei YIT 12066] Length = 200 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 39/199 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + DD + + ++SPGG AG AI+ +Q +K Sbjct: 31 VIFMTGEVEDHMADLIVAQLLFLESDDPDKDIYLYINSPGGVVTAGMAIYDTMQYIKPD- 89 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T A S +L++ + A S + + + Sbjct: 90 -VCTLCMGQACSMGSFLLAGGAPGKRFALPHSR------IMIHQPL-------------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 K + S + + + L+++ D+ + D R Sbjct: 129 --GGFKGQAS--------DIMIHARETERVKRTLTELLAKHTGKSVDEVMQDCD-RDNFM 177 Query: 214 TGAEAKKVGLIDVVGGQEE 232 + EA GLID V + Sbjct: 178 SAEEALAYGLIDRVITSRD 196 >gi|229006052|ref|ZP_04163740.1| Clp protease [Bacillus mycoides Rock1-4] gi|228755128|gb|EEM04485.1| Clp protease [Bacillus mycoides Rock1-4] Length = 221 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S ++ E+++ I +A + V ++S GG + AI ++ + ++ + +AA Sbjct: 15 SSSKVREQLKNI----TAKTINVHVNSGGGDVFESIAISNLLKNHSAQ--IVIHIDGLAA 68 Query: 109 SAGYLISCASNIIVAAETSL 128 S +I+ A++ I+ + ++ Sbjct: 69 SGASVIAMAADKIIMPKNTM 88 >gi|149915902|ref|ZP_01904426.1| hypothetical protein RAZWK3B_07479 [Roseobacter sp. AzwK-3b] gi|149810225|gb|EDM70071.1| hypothetical protein RAZWK3B_07479 [Roseobacter sp. AzwK-3b] Length = 275 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 25/218 (11%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +ED+Q +I I+ + + L +PGG A I RA++ + V V Sbjct: 69 LEDAQSIISAIKATPANTPID---LVLHTPGGLVLAAMQIARAVETHPAK--VTVFVPIY 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 A S G LI+ A++ IV E S++G I + S Sbjct: 124 AMSGGTLIALAADEIVMGEFSMLGPIDPQIMGISAASIIAARDAKPIEHVS----DVALV 179 Query: 167 FSEVNPKAV-QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG------AEAK 219 ++V+ KA+ Q+++ V+ + R + L+ G WT AEA+ Sbjct: 180 LADVSDKAIAQVVRGAVE------IMTPRMERGKAEELAKTLASG-TWTHDYALTPAEAR 232 Query: 220 KVGLIDVVGGQEEVWQ--SLYALGVDQSIRKIKDWNPP 255 ++GL VG E+ L+ V QS + ++PP Sbjct: 233 ELGLEVTVGMPSEILDLMKLFPAPVKQSAVEFLPFDPP 270 >gi|213968226|ref|ZP_03396370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato T1] gi|301385994|ref|ZP_07234412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato Max13] gi|302058876|ref|ZP_07250417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato K40] gi|213926864|gb|EEB60415.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato T1] Length = 383 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 40/214 (18%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G+I + + I+ ++ I DD + ++ + ++ GG + G AI A+ ++ R Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAI--DDGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + +AASAG + +C ++ +V A ++ L + + + Sbjct: 98 --CTARIDALAASAGSVAACGAHRMVMASNAM------LMIH------------NPWTYT 137 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL-VSESRNIPYDKTLVLSDGRIW-T 214 + + ++ + DV+D + + ++S +I + + + W T Sbjct: 138 AGD------------AEDLRKVADVLDQTLEAIIAAYKAKSPDIDEVELRRMVNAETWLT 185 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 EA +GL D +G EV L Q R+ Sbjct: 186 APEALALGLADEIGAGVEVKACLGQGAAIQRFRQ 219 >gi|289705668|ref|ZP_06502053.1| Clp protease [Micrococcus luteus SK58] gi|289557616|gb|EFD50922.1| Clp protease [Micrococcus luteus SK58] Length = 205 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 35/185 (18%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ +S +D + + ++SPGGS AG AI+ +Q + N V+T +A Sbjct: 40 DNANAICSQLLLLSAEDPEKDIYLYINSPGGSVTAGMAIYDTMQYIPND--VVTVATGLA 97 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L++ + A + VL P S + Sbjct: 98 ASMGQFLLASGAKGKRYATPHAR-----VLMHQP-----------------SGGIGG--- 132 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLI 224 +++ ++ L +E + L + + +T EA + G I Sbjct: 133 -----TESDIRIQAQLILHMKQVMAELTAEQTGQSVETILEDNARDKWFTAQEALEYGFI 187 Query: 225 DVVGG 229 D + Sbjct: 188 DHIAD 192 >gi|218461999|ref|ZP_03502090.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli Kim 5] Length = 203 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEAENPHKPINLYINSPGGVVTSGLAMYDTMRFIRA-- 90 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEPGGRAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERGMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVV 227 EA + GLID + Sbjct: 182 EEALEWGLIDRI 193 >gi|187778999|ref|ZP_02995472.1| hypothetical protein CLOSPO_02594 [Clostridium sporogenes ATCC 15579] gi|187772624|gb|EDU36426.1| hypothetical protein CLOSPO_02594 [Clostridium sporogenes ATCC 15579] Length = 231 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 83/239 (34%), Gaps = 59/239 (24%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVS 72 F ++ + + + I GQIE + LI ++ + + + Sbjct: 22 FGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKEVEGVFII 81 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS----- 127 L++ GG AG AI I+ + KP ++ V S G ++ +++ + T+ Sbjct: 82 LNTVGGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVH 139 Query: 128 ------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 L+ IGV + Y +++ + S K + F + + + Sbjct: 140 PIRMNGLI--IGVPQTFEYFNKMQERI-IEFIVRTSKISKEKLKEFMLQSDE-------L 189 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ G I G +A + G+I+ VGG +E L L Sbjct: 190 LNDM------------------------GTILIGKQAVESGIINEVGGVKEALDKLNNL 224 >gi|169830803|ref|YP_001716785.1| hypothetical protein Daud_0619 [Candidatus Desulforudis audaxviator MP104C] gi|169637647|gb|ACA59153.1| protein of unknown function DUF107 [Candidatus Desulforudis audaxviator MP104C] Length = 443 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 46/227 (20%) Query: 6 KKIKTRYVMLSL-VTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIER-ISRD 63 ++I V++ + V L V V D V + + G I + + ++R I+ Sbjct: 9 RRIFAMCVLIFVGVALLVSAVPVQGRVAD---QVVVLRVDGPIVPV--VAQYLDRGIADA 63 Query: 64 DSATAL-IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASN 119 + A+ ++ L++PGG + I + I PV+ V A SAG I+ +++ Sbjct: 64 ERLGAVCVIELNTPGGLYDTTQKIVQRIMN--ADVPVVVFVSPAGGWAGSAGTFITISAH 121 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 + A S +G +P G + + Sbjct: 122 VAAMAPGSRIG-----AAHPVAAGGEQMSGAQEEKIT----------------------- 153 Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGAEAKKVGLID 225 +VR ++E R +K +++ R +T +A + LID Sbjct: 154 ----QDAAAWVRSIAEMRGRDAEKAELAVTESRSYTDNQALEFNLID 196 >gi|302386147|ref|YP_003821969.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1] gi|302196775|gb|ADL04346.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1] Length = 236 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 + + G+I D E+ + R + V ++S GG +A I+ + K Sbjct: 19 LYLDGEISDETWYGDEVTPELFRRELVSGNGDITVWINSSGGDVFAAAQIYNMLMDYKGN 78 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V +V +AASA +I+ A + + ++ + + P +G S + K Sbjct: 79 --VTVKVDALAASAASVIAMAGTTVQMSPVAM------MMIH---NPMTVAIGDSEEMKK 127 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 + M E +++ + ++Y + K L D W Sbjct: 128 AGAMLDE--------------VKESIMNAYEI-------KTGLNRTKVSHLMDAESWFNA 166 Query: 216 AEAKKVGLIDVV 227 +A ++G D + Sbjct: 167 RKAVELGFADEI 178 >gi|168211352|ref|ZP_02636977.1| serine protease [Clostridium perfringens B str. ATCC 3626] gi|170710641|gb|EDT22823.1| serine protease [Clostridium perfringens B str. ATCC 3626] Length = 255 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 45/209 (21%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 +Q E +E + + L V ++SPGG + G AIF +++ + + + MAA Sbjct: 37 SAQSFTEELESLGD---ISTLNVYINSPGGDVFEGYAIFNVLRRKADNCQINVYIDGMAA 93 Query: 109 SAGYLISCASNIIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 S +I+ A I +++ SIG+ L K G+ Sbjct: 94 SIASVIAMAGTHISMPSNAVMMIHRASIGIYGN----SDVLAK-GIKF------------ 136 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW-TGAEAKKVG 222 ++ + + + +Y + + L G W T E + G Sbjct: 137 ----------LEKIDNNMKQTYIN-----RSNGKLDDSTLDFLFSNGDTWLTAQECLEYG 181 Query: 223 LIDVVGGQEEVWQSLY---ALGVDQSIRK 248 L D V +E + Y ALG ++I K Sbjct: 182 LCDEV-TEEIKISAKYDSKALGNYKNIPK 209 >gi|20089793|ref|NP_615868.1| nodulation protein NfeD [Methanosarcina acetivorans C2A] gi|19914735|gb|AAM04348.1| nodulation protein NfeD [Methanosarcina acetivorans C2A] Length = 434 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 5/122 (4%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIV 71 + + + +T+ F S V + I G I S LI + + + AL++ Sbjct: 10 LFIFCLCVTLTAFLAPSAGAAAEDKVLVLEISGAITPASDNLIADAIQSAESGNYEALVI 69 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV--HEMAASAGYLISCASNIIVAAETSLV 129 +L +PGG + I +AI+ PVI V A SAG LI ++I A +++ Sbjct: 70 TLDTPGGGLEETQIIIKAIEN--TTMPVIGYVPESGKAWSAGTLILMGTDIAAMAPFTVI 127 Query: 130 GS 131 GS Sbjct: 128 GS 129 >gi|256396401|ref|YP_003117965.1| ATP-dependent Clp protease proteolytic subunit [Catenulispora acidiphila DSM 44928] gi|256362627|gb|ACU76124.1| Endopeptidase Clp [Catenulispora acidiphila DSM 44928] Length = 208 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 45/188 (23%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L ++ ++ +DS + ++SPGGS AG AI+ + V N ++T MAAS Sbjct: 44 ANSLCAQLLLLTAEDSEKDIYFYINSPGGSVSAGLAIYDTMMYVPND--IVTVGMGMAAS 101 Query: 110 AGYLISCAS--NIIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G + A N A + + GS G+ + Sbjct: 102 MGQFLLTAGTPNKRFALPNTEILLHQGSAGIGGSAADI---------------------- 139 Query: 164 PSPFSEVNPKAVQMMQDV-VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKV 221 +Q + S L ++ DK SD W + AEAK+ Sbjct: 140 -------------RIQAERLLRSKKRMAELTAQHTGQTLDKIEKDSDRDTWFSSAEAKEY 186 Query: 222 GLIDVVGG 229 GLID + Sbjct: 187 GLIDDIMT 194 >gi|285017388|ref|YP_003375099.1| ATP-dependent clp protease proteolytic subunit protein [Xanthomonas albilineans GPE PC73] gi|283472606|emb|CBA15111.1| probable atp-dependent clp protease proteolytic subunit protein [Xanthomonas albilineans] Length = 208 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + ++ ++ + D+ + + ++SPGG AG AI+ +Q +K Sbjct: 36 LIFLVGPIDDHMANVVVAQLLFLEADNPEKDISLYINSPGGVVTAGMAIYDTMQYIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS L++ A+ A S V + + + + Sbjct: 95 -VSTICVGQAASMGALLLASGAAGKRYALPNSRV------MIHQPLGGFQGQATDIDIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + +V+ + ++ R+ D Sbjct: 148 REILT----------------LRARLNEVLAKHTGQSLETIA--RDTERDNFK------- 182 Query: 213 WTGAEAKKVGLIDVV 227 + +A+ GL+D V Sbjct: 183 -SAIDAQAYGLVDQV 196 >gi|260768947|ref|ZP_05877881.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii CIP 102972] gi|260616977|gb|EEX42162.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii CIP 102972] gi|315180643|gb|ADT87557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio furnissii NCTC 11218] Length = 208 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 P-VITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P V T A S +L++ + S V + + + + Sbjct: 99 PNVSTLCIGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + K + ++ + ++ R+ D Sbjct: 153 AQEILTIKNK----------------LNRLLADHTGQPLEVIE--RDTDRDN-------- 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +A GL+D + Sbjct: 187 FMSAQQAVDYGLVDAL 202 >gi|291279199|ref|YP_003496034.1| membrane-bound serine protease [Deferribacter desulfuricans SSM1] gi|290753901|dbj|BAI80278.1| membrane-bound serine protease [Deferribacter desulfuricans SSM1] Length = 426 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 42/227 (18%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERIS 61 F + K+K ++++ + +V + S+++ I I G I + + IE+ I Sbjct: 9 FSILKMKNKFILTLFIFFILVRYGISANLCA-------IKIDGVISPVTSKFIEQ--TIK 59 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 + ++ LI+ L++PGG + I ++I ++ PVIT V A AG Sbjct: 60 KCENKDGLILYLNTPGGLLTSTREIVQSI--FTSQIPVITVVSPPGARAG---------- 107 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 GS VL + + + P S M+ Sbjct: 108 ------SAGSFIVLASHYAI-------------MFEGTNIGAAHPVSIFGKDIDGDMRKK 148 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTGAEAKKVGLIDVV 227 +++ F++ ++E RN +K + + D + +T EA K LID V Sbjct: 149 IENDTIAFMKSIAEKRNRNIEKAISMVKDSKSYTAQEALKFKLIDKV 195 >gi|237803423|ref|ZP_04591008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025405|gb|EGI05461.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. oryzae str. 1_6] Length = 381 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 40/214 (18%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G+I + + I+ ++ I DD + +I + ++ GG + G AI A+ ++ R Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAI--DDGVSPIIAAFNTIGGDLFDGLAIHNALNRLGER 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + +AASAG + +C ++ +V A ++ L + + + Sbjct: 98 --CTARIDALAASAGSVAACGAHRMVMASNAM------LMIH------------NPWTYT 137 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL-VSESRNIPYDKTLVLSDGRIW-T 214 + + ++ + DV+D + + ++S NI + + + W T Sbjct: 138 AGD------------AEDLRKVADVLDQTLEAIIAAYKAKSPNIDEVELRRMVNAETWLT 185 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 EA +GL D +G EV L Q R+ Sbjct: 186 APEALALGLADEIGAGVEVKACLGQGAAIQRFRQ 219 >gi|295689638|ref|YP_003593331.1| endopeptidase Clp [Caulobacter segnis ATCC 21756] gi|295431541|gb|ADG10713.1| Endopeptidase Clp [Caulobacter segnis ATCC 21756] Length = 210 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 33/200 (16%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 38 IIFLTGPVEDGMASLICAQLLFLESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAAS G L+ A G+ G P + + + S Sbjct: 96 PVSTVCMGMAASMGSLLLAA------------GAAGQRISLPNARIMVHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + S E + + + + ++ Y + Y++ D + + Sbjct: 136 GGFRGQASDI-ERHAEDIIKTKRRLNEIY-------VKHCGRTYEEVERTLDRDHFMSAD 187 Query: 217 EAKKVGLIDVVGGQEEVWQS 236 EAK GL+D V E ++ Sbjct: 188 EAKAWGLVDHVYDSREAAEA 207 >gi|315453779|ref|YP_004074049.1| ATP-dependent clp protease proteolytic subunit [Helicobacter felis ATCC 49179] gi|315132831|emb|CBY83459.1| ATP-dependent clp protease proteolytic subunit [Helicobacter felis ATCC 49179] Length = 197 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D+ ++ ++ + +D + + ++SPGGS +G +I+ + + Sbjct: 29 IVLLSGEINDAVASSIVAQLLFLEAEDPEKDINLYINSPGGSVTSGFSIYDTMNYIHPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 + T AAS +L+SC + + S + + + L + Sbjct: 88 -ICTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGTQGQASNLAIYT 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + +K + Q+M + + P DK +D Sbjct: 141 KEILR--LKDLLN----------QIM---------------ATNTGQPLDKIEQDTDRDF 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK+ GL+D V Sbjct: 174 FMSALEAKEYGLVDEV 189 >gi|297530546|ref|YP_003671821.1| peptidase S14 ClpP [Geobacillus sp. C56-T3] gi|297253798|gb|ADI27244.1| peptidase S14 ClpP [Geobacillus sp. C56-T3] Length = 246 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 51/203 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L+V L++ GG AG AI + + KP ++ V S Sbjct: 69 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLS--KPTVSVVLGGGHSI 126 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ + N ET+ + +P + + + Sbjct: 127 GVPIAVSCNYSFITETA------TMTIHP----------IRLTGLVIGV---------PQ 161 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GAE 217 + + MQ+ V VR V++ I +K L +++ G + Sbjct: 162 TFEYLDKMQERV-------VRFVTKHSKISEEKFKEL----MFSKGNLTRDIGTNVVGPD 210 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A + GLID VGG + L L Sbjct: 211 AVRYGLIDEVGGVSQAMAKLRGL 233 >gi|13470920|ref|NP_102489.1| ATP-dependent protease proteolytic subunit ClpP-like protein [Mesorhizobium loti MAFF303099] gi|18202652|sp|Q98M38|CLPP1_RHILO RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|14021663|dbj|BAB48275.1| ATP-dependent protease proteolytic subunit ClpP-like protein [Mesorhizobium loti MAFF303099] Length = 201 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 68/198 (34%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G+I D S + ++ + D+ + + ++SPGG +G AI+ +Q V Sbjct: 33 IIFINGEINDDVSALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMQYVSC-- 90 Query: 98 PVITEVHEMAASAG---YLISCASNIIVAAETSL-----VGSIGVLFQYPYVKPFLDKLG 149 PV T AAS G + I ++ +G G Q ++ +++G Sbjct: 91 PVSTVCMGFAASMGSFLLMAGTPGRRIALPNATILLHQPLG--GFQGQASDIQRHAERIG 148 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 K Q M ++ V R + D Sbjct: 149 -----------------------KTKQRMAELYAQHCGRSYEEVE--RTLDRD------- 176 Query: 210 GRIWTGAEAKKVGLIDVV 227 T EA+ G++D V Sbjct: 177 -HFMTAREAQTWGIVDHV 193 >gi|28870573|ref|NP_793192.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato str. DC3000] gi|28853821|gb|AAO56887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. tomato str. DC3000] Length = 381 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 40/214 (18%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G+I + + I+ ++ I DD + ++ + ++ GG + G AI A+ ++ R Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAI--DDGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + +AASAG + +C ++ +V A ++ L + + + Sbjct: 98 --CTARIDALAASAGSVAACGAHRMVMASNAM------LMIH------------NPWTYT 137 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL-VSESRNIPYDKTLVLSDGRIW-T 214 + + ++ + DV+D + + ++S +I + + + W T Sbjct: 138 AGD------------AEDLRKVADVLDQTLEAIIAAYKAKSPDIDEVELRRMVNAETWLT 185 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 EA +GL D +G EV L Q R+ Sbjct: 186 APEALALGLADEIGAGVEVKACLGQGAAIQRFRQ 219 >gi|317403655|gb|EFV84143.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter xylosoxidans C54] Length = 369 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 33/162 (20%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++VSL+SPGG + AI+ A+++ R V T V AASA LI+ A + ++ E + Sbjct: 52 IVVSLNSPGGDVFDALAIYNALRRYAGR--VTTRVDGFAASAASLIAMAGDQLIMPENA- 108 Query: 129 VGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHW 188 L + + ++ + ++ D++D Sbjct: 109 -----QLMIH------------NAWTITGG------------TAEDLRSTADMMDRVRDG 139 Query: 189 FVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGG 229 V + DK + + D W + EA+ +G D++ Sbjct: 140 VVAAYARKSGQDADKIVEMMDATTWMSALEAQALGFCDLIED 181 >gi|228998550|ref|ZP_04158137.1| Clp protease [Bacillus mycoides Rock3-17] gi|228761018|gb|EEM09977.1| Clp protease [Bacillus mycoides Rock3-17] Length = 221 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 S ++ E+++ I +A + V ++S GG + AI ++ + ++ + +AA Sbjct: 15 SSSKVREQLKNI----TAKTINVHVNSGGGDVFESIAISNLLKNHSAQ--IVIHIDGLAA 68 Query: 109 SAGYLISCASNIIVAAETSL 128 S +I+ A++ I+ + ++ Sbjct: 69 SGASVIAMAADKIIMPKNTM 88 >gi|325922708|ref|ZP_08184448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas gardneri ATCC 19865] gi|325546825|gb|EGD17939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas gardneri ATCC 19865] Length = 196 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 23/173 (13%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + ++ ++ + D+ + + ++SPGG AG AI+ +Q +K Sbjct: 24 LIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPD- 82 Query: 98 PVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS L++ A+ A S V + + + + Sbjct: 83 -VSTICVGQAASMGALLLASGAAGKRYALPNSRV------MIHQPLGGFQGQATDIDIHA 135 Query: 153 KSVKS--SPMKAEPSPFSEVN------PKAVQMMQDVVDSSYHWFVRLVSESR 197 + + + S + + + + + VD+ + V V E R Sbjct: 136 REILTLRSRLNEILAKHTGQSLETIGRDTERDNFKSAVDAQAYGLVDQVLERR 188 >gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio ammonificans HB-1] gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio ammonificans HB-1] Length = 200 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 77/194 (39%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + +D + + ++SPGG AG AI+ +Q +K Sbjct: 33 RIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMQYIKPD 92 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T AAS L++ + A + + + + F Sbjct: 93 --VVTICMGQAASMGAVLLAAGAKGKRFALPHAR------IMIHQPLGGFQ--------- 135 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 E++ K + ++ +++ +++ P +K ++ + Sbjct: 136 ---GQATDI-----EIHAKEILRLKRMLNEI-------LAKHTRQPVEKVEQDTERDYFM 180 Query: 214 TGAEAKKVGLIDVV 227 + EAK+ GLID V Sbjct: 181 SAEEAKEYGLIDKV 194 >gi|254421111|ref|ZP_05034835.1| Clp protease [Brevundimonas sp. BAL3] gi|196187288|gb|EDX82264.1| Clp protease [Brevundimonas sp. BAL3] Length = 215 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 37/198 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ED+ + ++ + ++ + + ++SPGG + AI+ +Q +K+ Sbjct: 38 IIFLTGPFEDTMASLICAQLLFLESENPKKEISMYINSPGGQVSSALAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T V MAASAG LI + A+ +A + + + Sbjct: 96 PVSTVVMGMAASAGSLILTAGAAGQRIALPNAR------IMVHQ---------------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E++ ++ + ++ Y Y++ D + + Sbjct: 134 PSGGFRGQASDI-ELHAADIRYTKKRLNEIYVH-------HTGRTYEEVEKTLDRDHFMS 185 Query: 215 GAEAKKVGLIDVVGGQEE 232 EAK G++D V + E Sbjct: 186 AEEAKAWGIVDHVYDKRE 203 >gi|168184614|ref|ZP_02619278.1| Clp protease [Clostridium botulinum Bf] gi|182672304|gb|EDT84265.1| Clp protease [Clostridium botulinum Bf] Length = 226 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 83/239 (34%), Gaps = 59/239 (24%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVS 72 F ++ + + + I GQIE + LI ++ + + + Sbjct: 17 FGTTNLPPRQADRIQVLPIIGQIEGHMVLSPQTKATRYEHLIPQLIALETSKDVEGVFII 76 Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS----- 127 L++ GG AG AI I+ + KP ++ V S G ++ +++ + T+ Sbjct: 77 LNTVGGDVEAGLAIAEMIRSLS--KPTVSLVIGGGHSIGVPLATSADYSFISPTATMIVH 134 Query: 128 ------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 L+ IGV + Y +++ + S K + F + + + Sbjct: 135 PIRMNGLI--IGVPQTFEYFNKMQERI-IEFIVRTSKISKEKLKEFMLQSDE-------L 184 Query: 182 VDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ G I G +A + G+I+ VGG +E L L Sbjct: 185 LNDM------------------------GTILIGKQAVESGIINEVGGVKEALDKLNNL 219 >gi|21241838|ref|NP_641420.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas axonopodis pv. citri str. 306] gi|58580656|ref|YP_199672.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|78046637|ref|YP_362812.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84622589|ref|YP_449961.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710928|ref|ZP_02242135.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae pv. oryzicola BLS256] gi|188578371|ref|YP_001915300.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae pv. oryzae PXO99A] gi|188992776|ref|YP_001904786.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. campestris str. B100] gi|289664185|ref|ZP_06485766.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668776|ref|ZP_06489851.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas campestris pv. musacearum NCPPB4381] gi|294666562|ref|ZP_06731803.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325914926|ref|ZP_08177258.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas vesicatoria ATCC 35937] gi|325927441|ref|ZP_08188688.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas perforans 91-118] gi|25008307|sp|Q8PNI5|CLPP_XANAC RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460159|sp|Q5H434|CLPP_XANOR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|90183187|sp|Q3BWQ1|CLPP_XANC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|110816521|sp|Q2P6Z0|CLPP_XANOM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706557|sp|B0RTF7|CLPP_XANCB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706558|sp|B2SMI3|CLPP_XANOP RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|21107218|gb|AAM35956.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas axonopodis pv. citri str. 306] gi|58425250|gb|AAW74287.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|78035067|emb|CAJ22712.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84366529|dbj|BAE67687.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|167734536|emb|CAP52746.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris] gi|188522823|gb|ACD60768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas oryzae pv. oryzae PXO99A] gi|292603706|gb|EFF47116.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325538819|gb|EGD10483.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas vesicatoria ATCC 35937] gi|325542191|gb|EGD13686.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas perforans 91-118] Length = 208 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 23/173 (13%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + ++ ++ + D+ + + ++SPGG AG AI+ +Q +K Sbjct: 36 LIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS L++ A+ A S V + + + + Sbjct: 95 -VSTICVGQAASMGALLLASGAAGKRYALPNSRV------MIHQPLGGFQGQATDIDIHA 147 Query: 153 KSVKS--SPMKAEPSPFSEVN------PKAVQMMQDVVDSSYHWFVRLVSESR 197 + + + S + + + + + VD+ + V V E R Sbjct: 148 REILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLERR 200 >gi|56419814|ref|YP_147132.1| hypothetical protein GK1279 [Geobacillus kaustophilus HTA426] gi|56379656|dbj|BAD75564.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 246 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 51/203 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L+V L++ GG AG AI + + KP ++ V S Sbjct: 69 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLS--KPTVSVVLGGGHSI 126 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ + N ET+ + +P + + + Sbjct: 127 GVPIAVSCNYSFITETA------TMTIHP----------IRLTGLVIGV---------PQ 161 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GAE 217 + + MQ+ V VR V++ I +K L +++ G + Sbjct: 162 TFEYLDKMQERV-------VRFVTKHSKISEEKFKEL----MFSKGNLTRDIGTNVVGPD 210 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A + GLID VGG + L L Sbjct: 211 AVRYGLIDEVGGVSQAMAKLREL 233 >gi|167040789|ref|YP_001663774.1| hypothetical protein Teth514_2166 [Thermoanaerobacter sp. X514] gi|256751000|ref|ZP_05491883.1| conserved hypothetical protein [Thermoanaerobacter ethanolicus CCSD1] gi|166855029|gb|ABY93438.1| hypothetical protein Teth514_2166 [Thermoanaerobacter sp. X514] gi|256750110|gb|EEU63131.1| conserved hypothetical protein [Thermoanaerobacter ethanolicus CCSD1] Length = 44 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%) Query: 136 FQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 QY + DKLG+ ++KS P K SP ++ P+ +++Q Sbjct: 1 MQYTNYEGLYDKLGLKEITIKSGPYKDIGSPTRDLTPEEKKILQ 44 >gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium erythraeum IMS101] gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium erythraeum IMS101] Length = 196 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + + DD + + ++SPGGS AG AI+ +Q +K VIT +AAS Sbjct: 44 ANRIVAYMLYLDSDDPNKPIYLYINSPGGSVTAGLAIYDTMQYIKAD--VITICLGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A S + + + Sbjct: 102 MGSFLLAAGTKGKRLALPNSR------IMIHQPMGG------------TRGQATDI---- 139 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 E+ + ++ +++ ++E +K +D + + EAK+ GLID Sbjct: 140 -EIEANEILRVRSELNNM-------LAERTGQSLEKIEKDTDRDYYMSAEEAKEYGLIDQ 191 Query: 227 V 227 V Sbjct: 192 V 192 >gi|296330894|ref|ZP_06873369.1| protein export-enhancing factor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674412|ref|YP_003866084.1| protein export-enhancing factor [Bacillus subtilis subsp. spizizenii str. W23] gi|296151899|gb|EFG92773.1| protein export-enhancing factor [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412656|gb|ADM37775.1| protein export-enhancing factor [Bacillus subtilis subsp. spizizenii str. W23] Length = 245 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV + Y+ +++ V + S+ + Sbjct: 126 GVPIAVSCDYSYIAETATMTIHPVRLTGLVIGVPQTFEYLDKMQERV-VKFVTSHSNVNE 184 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + F E+ F S+ N+ D + G +A + Sbjct: 185 DK---FKEL-----------------MF----SKG-NLTRDIGTNV------VGKDAVEY 213 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 214 GLIDHVGGVGQAINKLNEL 232 >gi|253573584|ref|ZP_04850927.1| peptidase S14 ClpP [Paenibacillus sp. oral taxon 786 str. D14] gi|251847112|gb|EES75117.1| peptidase S14 ClpP [Paenibacillus sp. oral taxon 786 str. D14] Length = 253 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 86/237 (36%), Gaps = 57/237 (24%) Query: 34 NSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAY 81 +V + I GQIE + +I ++ ++ L++ L++ GG Sbjct: 45 GESNVYCLTIIGQIEGHLVLPPQNKTTKYEHVIPQLVAAEQNPRIEGLLIILNTVGGDVE 104 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNI-IVAAETSLVGSIGVLFQYPY 140 AG AI I + KP +T V S G I+ AS+ ++A ++ +P Sbjct: 105 AGLAIAEMIASLS--KPTVTVVIGGGHSIGVPIAVASDYSLIAESATMT-------IHP- 154 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 + + + + ++ MQ+ V VR V+ I Sbjct: 155 ---------IRMTGLVIGV---------PQTFEYIEKMQERV-------VRFVTTHSKIS 189 Query: 201 YDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 +K L G + G++A K GLID +GG + L ++ + K Sbjct: 190 EEKFKELMFKTGELNRDIGTAVGGSDAVKYGLIDAIGGIGDGLAKLNSMIESKRQAK 246 >gi|251798425|ref|YP_003013156.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus sp. JDR-2] gi|247546051|gb|ACT03070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus sp. JDR-2] Length = 195 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 51/200 (25%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + +I ++ ++ DD + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIFLGSAIDDDVANSVIAQLLFLAADDPEKDIHLYINSPGGSVTAGMAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 V T MAAS L++ + A + V G GV Q +K Sbjct: 88 -VSTICMGMAASMGSLLLTAGAKGKRFALPNAEVMIHQPLG--GVRGQASDIK------- 137 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + K ++ Y E PY+K +D Sbjct: 138 IHADWILKTKQK--------------------LNEIY-------VERTGQPYEKIDRDTD 170 Query: 210 GR--IWTGAEAKKVGLIDVV 227 R + +A GLID V Sbjct: 171 -RDNFMSAEDALNYGLIDKV 189 >gi|307285457|ref|ZP_07565596.1| Clp protease [Enterococcus faecalis TX0860] gi|306502681|gb|EFM71946.1| Clp protease [Enterococcus faecalis TX0860] Length = 257 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 89/268 (33%), Gaps = 57/268 (21%) Query: 38 VARIAIRGQIEDSQEL---------------IERIERISRDDSATALIVSLSSPGGSAYA 82 +I + G I S + + + + ++ V+++S GG Sbjct: 4 TVKIKVNGPIISSDDKWFYDWFEMEATSPKDVLDLLPANHNEDVE---VTINSYGGLVDM 60 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G I+ A++ + V + AAS +I+ A N + + +G + + Sbjct: 61 GNEIYTALRSYEGHVKVNVVMAGSAAS---IIAMAGNTVAISP------VGQIMIHN--- 108 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 V + KA +++Q +S + +V + Sbjct: 109 ------------VAMGAGGDYHTM-----DKASEILQKANNSLANAYVSK----TGKAKE 147 Query: 203 KTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE-----VWQSLYALGVDQSIRKIKDWNPPK 256 + L L D W T EA + G +D + + V L I ++K + Sbjct: 148 EILALMDKETWLTAEEAVENGFVDEIMFENTERPLLVADGGSGLISKDIINEVKKLKNQQ 207 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKV 284 N + + ++ + I +KQ ++ Sbjct: 208 NEPVVMVNKKELKKMIAEAIVEVKQNEI 235 >gi|297571128|ref|YP_003696902.1| endopeptidase Clp [Arcanobacterium haemolyticum DSM 20595] gi|296931475|gb|ADH92283.1| Endopeptidase Clp [Arcanobacterium haemolyticum DSM 20595] Length = 238 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 37/184 (20%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH-EM 106 E++ + ++ ++ +D + + ++SPGGS AG AIF +Q + KP + V + Sbjct: 65 ENANMICAQLLLLAAEDPEKDIYLYINSPGGSVTAGMAIFDTMQYI---KPDVATVGMGL 121 Query: 107 AASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 AAS G + + A + VL P LG + Sbjct: 122 AASMGQFLLTAGAKGKRYITPHTR-----VLMHQP--------LG------GAGG----- 157 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGL 223 +++ D++ L ++ ++ LV SD W T EA + G Sbjct: 158 ------TATEIRINADLILQMKQELSELNAKHTGKSVEQILVDSDRDHWFTAREALEYGF 211 Query: 224 IDVV 227 +D + Sbjct: 212 VDHI 215 >gi|210076021|ref|XP_505327.2| YALI0F12353p [Yarrowia lipolytica] gi|199424953|emb|CAG78134.2| YALI0F12353p [Yarrowia lipolytica] Length = 263 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 78/217 (35%), Gaps = 43/217 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I+DS ++ ++ + + + + ++SPGG+ AG AI + +++ Sbjct: 55 IVHVAGPIDDSMATSVVAQLLYLEHKSAQKPIHMYINSPGGAVTAGFAILDTMNYIRS-- 112 Query: 98 PVITEVHEMAASAGYLI---SCASNIIVAAETS---------LVGS-------------- 131 PV T AAS L+ N I+ ++ +VGS Sbjct: 113 PVHTVCLGQAASMASLLLTCGAPGNRIMTPNSTIMTHEPLGGIVGSSKLVELHTFHLQRI 172 Query: 132 -IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 ++ Y + + + + + AEP+P + + + + Sbjct: 173 RTRIIQLYYDSMKLGLEGRLKEEGAEETHEAAEPTPLMSLLSSDRSWIDTINQKTLTH-- 230 Query: 191 RLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 LV + + + EA K+GL+D + Sbjct: 231 SLVDTLIGLD----------QFFNADEALKLGLVDRI 257 >gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC 51142] gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp. ATCC 51142] Length = 229 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 77/194 (39%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS YAG AI+ +Q+++ Sbjct: 51 RIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPD 110 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A +S + + + + V I+ Sbjct: 111 --VVTICFGLAASMGAFLLSGGAKGKRMALPSSR------IMIHQPLGGAQGQA-VEIEI 161 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K + ++ ++ ++E P + ++ + Sbjct: 162 ----------------QAKEILYIKKRLNDM-------LAEHTGQPLETIAADTERDFFM 198 Query: 214 TGAEAKKVGLIDVV 227 + EA GLID V Sbjct: 199 SAQEAVDYGLIDQV 212 >gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit [Caldicellulosiruptor bescii DSM 6725] gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp [Caldicellulosiruptor kronotskyensis 2002] gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor bescii DSM 6725] gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Caldicellulosiruptor kronotskyensis 2002] Length = 195 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 30 IVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGFAIYDTMQYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 V T +AAS +L++ + A S + G GV Q +K Sbjct: 89 -VSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPLG--GVRGQATDIK------- 138 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + +++ ++ +SE P + +D Sbjct: 139 IHAEWIL--------------------KIKNRINKI-------LSERTGQPIEVIERDTD 171 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + T EA K G+ID V Sbjct: 172 RDFFMTAEEALKYGIIDKV 190 >gi|297621439|ref|YP_003709576.1| putative membrane-bound serine protease [Waddlia chondrophila WSU 86-1044] gi|297376740|gb|ADI38570.1| putative membrane-bound serine protease [Waddlia chondrophila WSU 86-1044] Length = 735 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 21/187 (11%) Query: 32 EDNSPHVARIAIR---GQIEDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 D + I + QI S + I+ + + +I+ L++PGG +A + I Sbjct: 240 GDEENRIGLIHVDDKNAQISQSTWIYIKSALEYYKKRKPSFIILELNTPGGEVFASQKIS 299 Query: 88 RAIQKV--KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 A++++ + PV+ ++ A SAG +++ + I + + +G P Sbjct: 300 DALKEIDTQQGIPVVAFINNWAISAGAMLAYSCRFIAVTKDASMG-----AAEPVFAGEG 354 Query: 146 DKLGVSIKSVKSS---PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 K+ + + V S+ S F A M+ + Y R + D Sbjct: 355 GKMETAPEKVNSALRTDFANRASFFGRNPDIAEAMVDKDIILVYRH-------GRVVRLD 407 Query: 203 KTLVLSD 209 + Sbjct: 408 SEEKIRT 414 >gi|126668253|ref|ZP_01739213.1| putative protease/scaffold protein [Marinobacter sp. ELB17] gi|126627279|gb|EAZ97916.1| putative protease/scaffold protein [Marinobacter sp. ELB17] Length = 621 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 39/191 (20%) Query: 41 IAIRGQIEDSQELIERIERISRD-DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPV 99 I I G I + + + D+A + V ++S GG AI+ A+ ++ + V Sbjct: 14 IYIYGPIGEGNVSAKAFVDALKTLDTAQTVNVRINSEGGDVSHAIAIYNALNELPD---V 70 Query: 100 ITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + + +AAS+ ++ A N + A ++ L + Sbjct: 71 MIHIDGLAASSASFVAMAGNKTLMAGNAI------LMIH--------------------- 103 Query: 160 MKAEPSPFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 P++ + M Q +++D V ++ + DK + W T A Sbjct: 104 -----RPWTGAVGDSDAMRQTGEILDKFQPILVSAYAKKTGLSDDKLNEMLAAETWLTAA 158 Query: 217 EAKKVGLIDVV 227 EA ++G +D V Sbjct: 159 EALELGFVDEV 169 >gi|9635590|ref|NP_061501.1| ClpP protease [Pseudomonas phage D3] gi|5059251|gb|AAD38956.1| ClpP protease [Pseudomonas phage D3] Length = 296 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 81/251 (32%), Gaps = 41/251 (16%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ ++ + + I D T V+++SPGG + G AI+ +++ K + V + Sbjct: 59 GEGVTAKRIAGALRSIGNDVDVT---VNINSPGGDVFEGLAIYNLLREHKGK--VTVNII 113 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AASA I+ A + I IG +L +G + ++ Sbjct: 114 GLAASAASFIAMAGDEIR---------IGRAAFLMIHNAWLIAMG------NRNDLREIA 158 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGL 223 + Y ++ I D + D W G EA G Sbjct: 159 DWLEP--------FDMTLADIY-------AQRTEIDIDDIVKQMDAETWIGGREAVDKGW 203 Query: 224 IDVVGGQEEVW-----QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPL 278 D +E+ +S L + + P++ + + S L Sbjct: 204 ADAFLESDEISSAPSNRSEAILAKRRMDAALARSGMPRSQRNELINDFKTSMLGAAGGGG 263 Query: 279 MKQTKVQGLWA 289 T + G A Sbjct: 264 DTPTDMPGAVA 274 >gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira platensis NIES-39] Length = 198 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++ + + +D + + + ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLSEEVDDGIANAIVAYMLYLDSEDPSKPIYLYINSPGGSVTAGMAIYDTMQYIKSD- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T MAAS +L++ + +A + + + + Sbjct: 91 -VVTICVGMAASMGAFLLAAGTKGKRLALPNAR------IMIHQPLGG------------ 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ V++ ++E +K +D + + Sbjct: 132 TRGQATDI-----EIEAKEILRIRKVLNEM-------LAERSGQTLEKIEKDTDRDYFMS 179 Query: 215 GAEAKKVGLIDVV 227 AEA + GLID V Sbjct: 180 AAEAHEYGLIDQV 192 >gi|52145334|gb|AAU29371.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +R + +K ++ ++ G A ++GL D + + Q Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGERAIEIGLADGITILSSINQ 61 Query: 236 SLYALGVDQSIRKIKDWNPPK-NYWFCDLKNLSISSLLEDTIP 277 + + +Q+ +K N K +L L S + D I Sbjct: 62 NRSIIMNEQTTNDLKTNNLTKYRTEVVELIRLCNLSRMPDKIG 104 >gi|152976162|ref|YP_001375679.1| peptidase S14 ClpP [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024914|gb|ABS22684.1| peptidase S14 ClpP [Bacillus cytotoxicus NVH 391-98] Length = 250 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSYIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + Q L AL Sbjct: 216 GLIDDVGGIGDAIQKLNAL 234 >gi|282921759|ref|ZP_06329476.1| phage protease [Staphylococcus aureus A9765] gi|282594021|gb|EFB99010.1| phage protease [Staphylococcus aureus A9765] Length = 257 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 56/215 (26%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + + V +AAS +I+ + + I + S L + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSF------LMIH------------N 116 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS------ESRNIPYDKTL 205 + N + ++ D++D + VS +++N+ ++ Sbjct: 117 SWVMTVG------------NAEELRKTADLLDKT-----DAVSNSAYLDKAKNLDQEQLK 159 Query: 206 VLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID V G E+ S+ Sbjct: 160 QMLDAETWLTAEEALSFGLIDEVLGANEIAASISK 194 >gi|269215646|ref|ZP_06159500.1| Clp protease [Slackia exigua ATCC 700122] gi|269131133|gb|EEZ62208.1| Clp protease [Slackia exigua ATCC 700122] Length = 255 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 35/200 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + I+D + ++ ++ + D + + ++SPGGS AG AI+ A+Q ++ Sbjct: 82 IVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLYINSPGGSVSAGLAIYDAMQFIRCD- 140 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS A L + + S + + + ++ + + Sbjct: 141 -VSTVCLGMAASMASVLTAAGAPGKRFVTPNS------QIMIHQPMGGSGERTQQTDFDI 193 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++ M K ++ ++ + ++ S+ W T Sbjct: 194 LANEM-----------RKTRDRLEGLL-----------ATHTGKTVEQIHADSERDHWLT 231 Query: 215 GAEAKKVGLIDVVGGQEEVW 234 EAK GL+D + Sbjct: 232 AEEAKAYGLVDDIITSRAAA 251 >gi|229096954|ref|ZP_04227923.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock3-29] gi|228686564|gb|EEL40473.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus Rock3-29] Length = 239 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 79/248 (31%), Gaps = 50/248 (20%) Query: 39 ARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 A + I G+I S ++ + D + + ++SPGGS + AI Sbjct: 10 ADVFIYGEITKYAWEEYGEVSSITFKNELDELG--DGIETINLYINSPGGSVFETMAIIA 67 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 +Q+ + VI+ + + AS ++ S+ I+ S+ L + Sbjct: 68 MLQRHPAK--VISYIDGIGASCASVLPMISDKIIMYANSM------LMVH---------- 109 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + + S + ++ Q +V L + D L Sbjct: 110 --NAWTYASGN----ADQLRKAADDIERINQSMVQHY------LTRAGDKLDEDILKQLL 157 Query: 209 DGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLS 267 D W + EA + GL D + L + +K++ N+S Sbjct: 158 DAETWLSADEAMEYGLCDEIISANNAAACL-------DEKWMKEYKNVPQQLVNTQANIS 210 Query: 268 ISSLLEDT 275 +LE Sbjct: 211 SDEMLERQ 218 >gi|295395011|ref|ZP_06805223.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294972170|gb|EFG48033.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 203 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ++ + ++ ++ +D + + ++SPGGS AG AI+ +Q +K V T MA Sbjct: 40 SNANAICAQLMLLAAEDPEKDIWLYINSPGGSVTAGMAIYDTMQYIKPD--VGTVAMGMA 97 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L+S + A + + + P+ Sbjct: 98 ASMGQFLLSAGAKGKRFATPHAR------ILMHQ-------------------PLGGIGG 132 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 +++ +++ + +E ++ L +D W T EA G I Sbjct: 133 -----TATDIKIQAELILHMKRQMAEITAEQTGKTVEQILKDNDRDHWFTADEALDYGFI 187 Query: 225 DVV 227 D V Sbjct: 188 DKV 190 >gi|290894026|ref|ZP_06557000.1| serine protease [Listeria monocytogenes FSL J2-071] gi|290556370|gb|EFD89910.1| serine protease [Listeria monocytogenes FSL J2-071] Length = 235 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 43/199 (21%) Query: 39 ARIAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 A I I G+I + + ++ + + + + ++SPGG+ + G AI Sbjct: 16 AEIYIYGEIVSFKWDEEDTTASSFQKDLKELG---NIETINLHVNSPGGNVFEGIAISNM 72 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I+ K + VI V +AAS +I ++ +V E S Q + P + G Sbjct: 73 IKAHKAK--VIAYVDALAASIASVIVAGADKVVMYENS--------MQMIH-NPTWNVSG 121 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 S + K + + Q V + + +K + Sbjct: 122 NSTELRK---HADDLD----------AIAQASVLTYLS------KAGDKLSEEKIKQIMA 162 Query: 210 GRIW-TGAEAKKVGLIDVV 227 W + +A GL D + Sbjct: 163 EETWLSAKDALGHGLCDEI 181 >gi|73670912|ref|YP_306927.1| nodulation efficiency protein NfeD [Methanosarcina barkeri str. Fusaro] gi|72398074|gb|AAZ72347.1| Nodulation efficiency protein NfeD [Methanosarcina barkeri str. Fusaro] Length = 442 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 12/159 (7%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATA 68 + + ++ S S V + + I + + + + IE+ +++ A Sbjct: 16 HLFFILFLCFVLIAVSMPSGDAGPQQKVLVLEVSEAITPASDDIIADAIEKA-ENENFEA 74 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV--HEMAASAGYLISCASNIIVAAET 126 L++SL++PGG + I AI+ PVI V A SAG LI ++I A Sbjct: 75 LVISLNTPGGGLDETQTIISAIENAS--VPVIGYVPESGKAWSAGTLILMGTDIAAMAPF 132 Query: 127 SLVGS-----IGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 +++GS + + P + V + Sbjct: 133 TVIGSAQPVQVSIEGTKPITDEKIINALVKFSVATAGKH 171 >gi|227872170|ref|ZP_03990538.1| endopeptidase Clp [Oribacterium sinus F0268] gi|227841983|gb|EEJ52245.1| endopeptidase Clp [Oribacterium sinus F0268] Length = 208 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 79/193 (40%), Gaps = 36/193 (18%) Query: 40 RIAIRGQIEDSQE---LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G +S +I ++ + +D + + ++SPGGS AG I+ +Q +K Sbjct: 37 RIVFLGDEVNSDTASLVIAQLLFLESEDPDKDISLYINSPGGSVTAGMGIYDTMQYIKCD 96 Query: 97 KPVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + G P + + + Sbjct: 97 --VSTICVGMAASMGAFLLAGGAK-------------GKRMILPNAEVMIHQP------- 134 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + + +Q+ + + + ++++E+ N P++K + ++ W + Sbjct: 135 -SGGAQGQAT--------EIQITAEWILRTKKNLAKILAENCNQPFEKVMADTERDYWMS 185 Query: 215 GAEAKKVGLIDVV 227 +A + GL+D + Sbjct: 186 AEQALEYGLVDHI 198 >gi|315181806|gb|ADT88719.1| hypothetical protein vfu_B00484 [Vibrio furnissii NCTC 11218] Length = 444 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 37/251 (14%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIEDS--QELIERIERISRD 63 R VM L+T + + + ++ N+P V IAI G I + +I+ +ER ++ Sbjct: 3 RRVMEVLLTSLLSFSTLATADTTNAPAAPSQTVPVIAISGAIGPAVGDYVIKELERANQQ 62 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNI 120 +A A+IV+L +PGG + I + I + + PV+ V AASAG I A +I Sbjct: 63 VNAPAVIVTLDTPGGLSSTLRDINQHI--LASDIPVLCLVYPPGARAASAGTYILYACHI 120 Query: 121 IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQD 180 A + +G V I + +PS E +++ D Sbjct: 121 AAMAPATTLG---------------AATPVQIGGPSGGEQQDKPS---EPTAMEKKVLND 162 Query: 181 VVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLY 238 + ++R +++ R + + D + EA ++ +I+V+ +++ ++ Sbjct: 163 SI-----AYIRSLAQLRGRNVEWAEKAVRDAATLSAIEALEMNVINVMAESPQDLLNAVN 217 Query: 239 ALGVDQSIRKI 249 +D + R + Sbjct: 218 GQTLDVNHRAV 228 >gi|237744773|ref|ZP_04575254.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 7_1] gi|229432002|gb|EEO42214.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 7_1] Length = 367 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 92/274 (33%), Gaps = 57/274 (20%) Query: 30 HVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGS 79 +++ + + A I I G I S + ++ + + + + ++SPGG Sbjct: 11 EIKNLTENTAEIRIYGTITKWAWEDYGEVSSANFAKELQNY---KNVSQINLRVNSPGGD 67 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + AI+ ++ + + +AASA + ++ IV IG LF Sbjct: 68 VFEASAIYNLLKDFAKVNNIQITGYIDGLAASAASFLILCASKIVMG-------IGALFM 120 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P G SI+ K + +++ + Y Sbjct: 121 IHN--PLTYAYGNSIELQKQIELLDT--------------VKESILDIY-------CTKS 157 Query: 198 NIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPK 256 + ++ + W EA + G ID + + ++I+ I + + Sbjct: 158 KLSREEIAEKMNNEKWFRANEALEAGFIDEI---------VENDNSLENIKNISNELHIE 208 Query: 257 NYWFCDLKNLSISSL--LEDTIPLMKQTKVQGLW 288 N+ DL + + +++T + VQ L Sbjct: 209 NFIHQDLLKEKLKEIENMKNTGGIKMSKSVQELL 242 >gi|325142748|gb|EGC65122.1| hypothetical protein NMB9615945_0670 [Neisseria meningitidis 961-5945] Length = 92 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 188 WFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 F + VSE+R P ++ G W G +A + LID + +++ + ++ Sbjct: 1 MFKQFVSENR--PQLDIEEVATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVK 58 >gi|254555672|ref|YP_003062089.1| Clp protease domain protein [Lactobacillus plantarum JDM1] gi|254044599|gb|ACT61392.1| Clp protease domain protein [Lactobacillus plantarum JDM1] Length = 247 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 92/262 (35%), Gaps = 48/262 (18%) Query: 40 RIAIRGQI-------------EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +I ++G I DS + I+ + D S + ++S GG AG I Sbjct: 3 KINVKGPIISNDDKWIYDMLEMDSTAPKDVIDALPDDGSTVEV--DINSGGGLMDAGTEI 60 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + A+ + + V+ + MAAS+ LI+ A N + +G + + Sbjct: 61 YTALMAYQGK--VMVNIVGMAASSASLIAMAGNPTRISP------VGQIMIHNV------ 106 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + ++ + ++++ Q + + ++ + + + Sbjct: 107 ----------AGGLRGDYRDQAKLSEILKQSSEAIANAYHLK--------TGLSMEDLQA 148 Query: 207 LSDGRIWT-GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKN 265 D + +AK++G +D + +++ +I KI + N ++ Sbjct: 149 KMDSETYLNADQAKELGFVDEIMFDDQIELVADGGLPKPAIDKITELMKQNNSGMTTARS 208 Query: 266 LSISSLLEDTIPLMKQTKVQGL 287 ++ L + I + Q L Sbjct: 209 INPFKLSDSDIDRITTAVTQKL 230 >gi|283955633|ref|ZP_06373126.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 1336] gi|283792858|gb|EFC31634.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 1336] Length = 194 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 87 -VCTICIGQAASMGAFLLSCGAEGKRFALPNSR------IMIHQPLGGA----------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ K ++ + + Sbjct: 129 -RGQATDI-----EIQAKEILRLKTILNDI-------LAKNTKQKVTKIAKDTERDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 AQEAKEYGLIDKV 188 >gi|256840555|ref|ZP_05546063.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737827|gb|EEU51153.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 459 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQ--ELIERIERISRDDSATALI 70 +L+++T V+ + S E + I I+ +I+++ L + + +A A++ Sbjct: 4 LLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQ-LNADAIL 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +++ GG + +++ AI + + PV + AASAG LIS A I + + +G Sbjct: 63 LHMNTYGGLLESADSMRTAI--LYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIG 120 >gi|85705188|ref|ZP_01036288.1| periplasmic serine protease [Roseovarius sp. 217] gi|85670510|gb|EAQ25371.1| periplasmic serine protease [Roseovarius sp. 217] Length = 274 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 5/86 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 +ED+Q +I I+ RD + L +PGG A I RA++ + V V Sbjct: 69 MEDAQSIISAIKATPRDTPID---LVLHTPGGLVLAAMQIARAVEAHPAK--VTIFVPIY 123 Query: 107 AASAGYLISCASNIIVAAETSLVGSI 132 A S G LI+ A++ IV E S++G I Sbjct: 124 AMSGGTLIALAADEIVMGEFSMLGPI 149 >gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes bacterium SGP1] Length = 195 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 39/183 (21%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K+ PV T MAAS Sbjct: 43 ANSIVAQLLFLESEDPDKDIHLYINSPGGSVTAGMAIYDTMQYIKS--PVSTICVGMAAS 100 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEP 164 A L+S + +A + V + + + +++ ++ Sbjct: 101 MAAILLSGGARGKRLALPNAEV------MIHQPLGGTSGQASDIEIHARNILNT------ 148 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + M ++ V V++ D+ T EA GLI Sbjct: 149 ----------RKRMNAILARHTGQDVEKVAQ----DTDRDN------FMTAQEALDYGLI 188 Query: 225 DVV 227 D + Sbjct: 189 DRI 191 >gi|282165184|ref|YP_003357569.1| hypothetical protein MCP_2514 [Methanocella paludicola SANAE] gi|282157498|dbj|BAI62586.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 292 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+E++ I D + + +PGG A A I A++ K VI Sbjct: 78 IDDSEEVLRAIRMTPADTPID---LIMHTPGGIALAATQIALALKAHPAPKRVIV--PHY 132 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 133 AMSGGTLIALAADEILMDPHAVLG 156 >gi|156937326|ref|YP_001435122.1| hypothetical protein Igni_0533 [Ignicoccus hospitalis KIN4/I] gi|156566310|gb|ABU81715.1| protein of unknown function DUF114 [Ignicoccus hospitalis KIN4/I] Length = 287 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D ++ I I +++ L +PGG A I +A+ +K + V A Sbjct: 67 DVEDSEAVIRAIHNTPKDVPIMMILHTPGGMVLAASQIAKALHDHPAKK--VAVVPHYAM 124 Query: 109 SAGYLISCASNIIVAAETSLVG 130 S G LI+ A++ I + +G Sbjct: 125 SGGTLIALAADEIWMGPAAALG 146 >gi|150007180|ref|YP_001301923.1| putative membrane-bound serine protease [Parabacteroides distasonis ATCC 8503] gi|255015205|ref|ZP_05287331.1| putative membrane-bound serine protease [Bacteroides sp. 2_1_7] gi|298377605|ref|ZP_06987557.1| serine protease, ClpP class [Bacteroides sp. 3_1_19] gi|149935604|gb|ABR42301.1| conserved hypothetical protein, putative membrane-bound serine protease [Parabacteroides distasonis ATCC 8503] gi|298265624|gb|EFI07285.1| serine protease, ClpP class [Bacteroides sp. 3_1_19] Length = 459 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQ--ELIERIERISRDDSATALI 70 +L+++T V+ + S E + I I+ +I+++ L + + +A A++ Sbjct: 4 LLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQ-LNADAIL 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +++ GG + +++ AI + + PV + AASAG LIS A I + + +G Sbjct: 63 LHMNTYGGLLESADSMRTAI--LYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIG 120 >gi|302344005|ref|YP_003808534.1| peptidase S14 ClpP [Desulfarculus baarsii DSM 2075] gi|301640618|gb|ADK85940.1| peptidase S14 ClpP [Desulfarculus baarsii DSM 2075] Length = 245 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 39/161 (24%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++SPGG + EA+ A+Q+ R +I + +AASA ++ A++ I A+ Sbjct: 75 LRINSPGGGVFEAEAMQTALQQHPAR--IIAHIDGLAASAAGFVALAADEIEMAD----- 127 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 G F GV++ ++ M + +++ Sbjct: 128 --GAFFMIHNA------WGVAVGD--ATEMLDYAAMLEKMDA------------------ 159 Query: 191 RLVSESRNIPYDKTLVLS---DGRIW-TGAEAKKVGLIDVV 227 LV + R ++ W + AEA +G +D V Sbjct: 160 NLVRDYRRKTGHSAERIATWMQAETWLSAAEALDLGFVDRV 200 >gi|296110489|ref|YP_003620870.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii IMSNU 11154] gi|295832020|gb|ADG39901.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii IMSNU 11154] Length = 229 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 51/230 (22%) Query: 40 RIAIRGQIEDSQEL--------------IERIERISRDDSATALIVSLSSPGGSAYAGEA 85 R+ I+G I + + + + ++ D S + ++S GG A Sbjct: 2 RLNIKGMITNDDDANIYRDWLGMSVTSPADVLSKLPDDGSDLEIA--INSGGGEVDAANE 59 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++ + R VI +V A SA +I+ A + + + + L + Sbjct: 60 IYTGLRNYQGR--VIIQVESSAYSAASIIAMAGDTVQISPVA------QLMIH------- 104 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 + + + + + + V R P D+ L Sbjct: 105 -----NASTYAGGNHNDLDKTSNALKSTDKAIAKAY----------AVKTGR--PVDEFL 147 Query: 206 VLSDGRIWT-GAEAKKVGLIDVVGGQEE--VWQSLYALGVDQSIRKIKDW 252 + D W +A ++GL D + E V S+ + ++I +IKD Sbjct: 148 AMMDKETWINADDAIELGLADEIMTFETEPVTNSISNVLPRKTINRIKDL 197 >gi|332799727|ref|YP_004461226.1| hypothetical protein TepRe1_1788 [Tepidanaerobacter sp. Re1] gi|332697462|gb|AEE91919.1| protein of unknown function DUF114 [Tepidanaerobacter sp. Re1] Length = 281 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I DS+++I I+ D + + + L +PGG A A I RA++ K + V + Sbjct: 74 INDSEKIIRAIQ--MTDPNMP-IDMILHTPGGVALAALQIARALKLHKGK--VRVFIPHY 128 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV + +++G Sbjct: 129 AMSGGTLIALAADEIVMGDNAMLG 152 >gi|296051584|ref|YP_003632258.1| peptidase S14 ClpP [Planctomyces limnophilus DSM 3776] gi|296016821|gb|ADG70059.1| peptidase S14 ClpP [Planctomyces limnophilus DSM 3776] Length = 179 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 35/166 (21%) Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVA 123 T +++ ++S GG AI++ +++ + ++ A S I+ A + I Sbjct: 10 SDVTEVVIRINSVGGYVGEASAIYQLLKEHPAN--IHVKIDGEAISCASWIAMAGDKITI 67 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 AE G++ + +PS + ++ + V Sbjct: 68 AEH------GLMMVH------------------------DPSTWISGTADDLRK-EAEVL 96 Query: 184 SSYHWFVRLVSESR-NIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 SY + + +R + + W T +AK G +D + Sbjct: 97 DSYKEVIAGIYAARSGTDVEDVKKMMSDETWMTATQAKDKGFVDEI 142 >gi|256854365|ref|ZP_05559729.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis T8] gi|256709925|gb|EEU24969.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus faecalis T8] Length = 196 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 71/200 (35%), Gaps = 37/200 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + DS + + ++SPGGS AG AIF + VK Sbjct: 29 IIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKAD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V MAAS G + A A + + + + + Sbjct: 88 -VQTIVLGMAASMGSFLLTAGQKGKRFALPNAE------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + + +++E P + +D + T Sbjct: 134 -----------------TEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMT 176 Query: 215 GAEAKKVGLIDVVGGQEEVW 234 +AK+ GLID V Sbjct: 177 AEQAKEYGLIDEVMENSSAL 196 >gi|257063882|ref|YP_003143554.1| protease subunit of ATP-dependent protease [Slackia heliotrinireducens DSM 20476] gi|256791535|gb|ACV22205.1| protease subunit of ATP-dependent protease [Slackia heliotrinireducens DSM 20476] Length = 206 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 35/197 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D + + ++SPGGS AG AI+ A+Q ++ Sbjct: 34 IIFLGDAIDDNVANLVVAQLLHLESSDPEKDISLYINSPGGSVSAGMAIYDAMQFIRCD- 92 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +++ A S + + + + + + Sbjct: 93 -VSTVCIGMAASMASVLTAAGTPGKRFITPNS------QIMIHQPMGGAESRTQQTDFEI 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++ M K + ++ ++ + + S+ W T Sbjct: 146 AATEM-----------RKTRERLEGIL-----------AAHTGQTIETIHADSERDHWLT 183 Query: 215 GAEAKKVGLIDVVGGQE 231 EAK GL+D + Sbjct: 184 AEEAKAYGLVDEIITSR 200 >gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter alkaliphilus AHT 1] gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter alkaliphilus AHT 1] Length = 193 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I I+D + +I ++ + +D + + ++SPGGS YAG AI+ +Q +K Sbjct: 29 IIFIGSPIDDNVANLVIAQLLFLESEDPEKDINIYVNSPGGSVYAGLAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS L++ ++ + S + + + + V I+ Sbjct: 88 -VSTICVGLAASMGAVLLAAGADGKRFSLPNSR------IMVHQPLGGAQGQA-VDIEIH 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 K + +++ ++ +S P ++ +D + + Sbjct: 140 ----------------AKEILRIRERLNEI-------LSGHTGKPVEQIARDTDRDYFMS 176 Query: 215 GAEAKKVGLIDVV 227 +AK+ GLID V Sbjct: 177 AEQAKEYGLIDGV 189 >gi|89100460|ref|ZP_01173322.1| YqeZ [Bacillus sp. NRRL B-14911] gi|89084803|gb|EAR63942.1| YqeZ [Bacillus sp. NRRL B-14911] Length = 452 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 71/177 (40%), Gaps = 10/177 (5%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSA 66 ++ +L+ + + ++ DN V + I +E + R + ++ A Sbjct: 10 LRRAVTLLAFLGILMIMLIPEKGNADNEV-VYVVPIEETVEKGLYAFLNRAVSTAEENGA 68 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAET 126 +A+I + +PGG+ A I + + + ++ V+ A SAG IS + I Sbjct: 69 SAIIFEMDTPGGAVDAAGKIGKLLAE--TELKTVSFVNNQALSAGAYISLNMDEIYMVPG 126 Query: 127 SLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 +++GS ++ Q G +S S MK+ + A+ M + VD Sbjct: 127 AVMGSAAIIDQSGNT------AGKKAESYWLSAMKSAANQSGRDPEIALAMADESVD 177 >gi|257428232|ref|ZP_05604630.1| protease [Staphylococcus aureus subsp. aureus 65-1322] gi|258445568|ref|ZP_05693750.1| prophage protease [Staphylococcus aureus A6300] gi|258455562|ref|ZP_05703519.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|282905858|ref|ZP_06313713.1| phage protease [Staphylococcus aureus subsp. aureus Btn1260] gi|257275073|gb|EEV06560.1| protease [Staphylococcus aureus subsp. aureus 65-1322] gi|257855615|gb|EEV78548.1| prophage protease [Staphylococcus aureus A6300] gi|257862250|gb|EEV85021.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|282331150|gb|EFB60664.1| phage protease [Staphylococcus aureus subsp. aureus Btn1260] Length = 257 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 50/212 (23%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRK-- 130 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 ++ V +S+Y +++++ ++ + Sbjct: 131 ----------------------TADLLEKTDAVSNSAYLD------KAKDLDQEQLKQML 162 Query: 209 DGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 D W T EA GLID + G E+ S+ Sbjct: 163 DAETWLTAEEALSFGLIDEILGANEIAASISK 194 >gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus brevis NBRC 100599] gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus brevis NBRC 100599] Length = 193 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 40/195 (20%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 27 RIILLGTEIDDEIANLIVAQLLFLQAEDPDKDISLYINSPGGSVTAGMAIYDTMQYIKPD 86 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS +L++ + A + V + + + Sbjct: 87 --VSTICVGMAASMGAFLLAAGAKGKRFALPNAEV------MIHQPLGGVRGQA------ 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--I 212 + +++ + + + ++SE PY++ +D R Sbjct: 133 ------------------EDIRIHAEWIMKTKRQLNEILSERTGQPYERVEQDTD-RDNF 173 Query: 213 WTGAEAKKVGLIDVV 227 + EAK GLID + Sbjct: 174 MSAEEAKAYGLIDSI 188 >gi|255974949|ref|ZP_05425535.1| clp protease domain-containing protein [Enterococcus faecalis T2] gi|255967821|gb|EET98443.1| clp protease domain-containing protein [Enterococcus faecalis T2] Length = 253 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 57/266 (21%) Query: 40 RIAIRGQIEDSQEL---------------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 +I + G I S + + + + ++ V+++S GG G Sbjct: 2 KIKVNGPIISSDDKWFYDWFEMEATSPKDVLDLLPANHNEDVE---VTINSYGGLVDMGN 58 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ A++ + V + AAS +I+ A N + + +G + + Sbjct: 59 EIYTALRSYEGHVKVNVVMAGSAAS---IIAMAGNTVAISP------VGQIMIHN----- 104 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V + KA +++Q +S + +V ++ Sbjct: 105 ----------VAMGAGGDYHTM-----DKASEILQKANNSLANAYVSK----TGKAKEEI 145 Query: 205 LVLSDGRIW-TGAEAKKVGLIDVVGGQEE-----VWQSLYALGVDQSIRKIKDWNPPKNY 258 L L D W T EA + G +D + + V L I ++K +N Sbjct: 146 LALMDKETWLTAEEAVENGFVDEIMFENTERPLLVADGGSGLISKDIINEVKKLKNQQNE 205 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 + + ++ + I +KQ ++ Sbjct: 206 PVVMVNKKELKKMIAEAIVEVKQNEI 231 >gi|255321158|ref|ZP_05362324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter radioresistens SK82] gi|262380154|ref|ZP_06073309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter radioresistens SH164] gi|255301712|gb|EET80963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter radioresistens SK82] gi|262298348|gb|EEY86262.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter radioresistens SH164] Length = 201 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRFCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ ++ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYERIA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQAAKEYGLVDEV 196 >gi|295399870|ref|ZP_06809851.1| peptidase S14 ClpP [Geobacillus thermoglucosidasius C56-YS93] gi|312111618|ref|YP_003989934.1| peptidase S14 ClpP [Geobacillus sp. Y4.1MC1] gi|294978273|gb|EFG53870.1| peptidase S14 ClpP [Geobacillus thermoglucosidasius C56-YS93] gi|311216719|gb|ADP75323.1| peptidase S14 ClpP [Geobacillus sp. Y4.1MC1] Length = 243 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 51/203 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ + L+V L++ GG AG AI + + KP ++ V S Sbjct: 66 EHVIPQIVAIEQNQNIEGLLVILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 123 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ + + ET+ + +P + + + Sbjct: 124 GVPIAVSCDYSFITETA------TMTIHP----------IRLTGLVIGV---------PQ 158 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GAE 217 + + MQ+ V VR V++ I +K L +++ G + Sbjct: 159 TFEYLDKMQERV-------VRFVTKHSKITEEKFKEL----MFSKGNLTRDIGTNVVGPD 207 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A K GLID VGG + L L Sbjct: 208 AVKYGLIDEVGGVSKAMNKLREL 230 >gi|311896032|dbj|BAJ28440.1| putative ATP-dependent Clp protease proteolytic subunit [Kitasatospora setae KM-6054] Length = 216 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI GQ D + ++ ++ ++ D + + ++SPGGS AG AI+ +Q +KN Sbjct: 37 RIIFLGQQVDDDIANKITAQLLLLAADPE-KDIYLYINSPGGSISAGMAIYDTMQYIKND 95 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V+T MAAS G + A G F P + + Sbjct: 96 --VVTIAMGMAASMGQFLLTAGAK------------GKRFSLPNANILMHQ--------- 132 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTG 215 P +++ +A Q++ + L+++ +D+ SD R +T Sbjct: 133 --PSAGLGGSATDIRIQAEQLL-----RTKKRMSELIAQHSGQSFDQITADSDRDRWFTP 185 Query: 216 AEAKKVGLIDVV 227 EAK GLID + Sbjct: 186 EEAKAYGLIDEI 197 >gi|6723221|dbj|BAA89619.1| capsid protein [Bacteriophage WO] Length = 113 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 5 LQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 >gi|291522433|emb|CBK80726.1| Protease subunit of ATP-dependent Clp proteases [Coprococcus catus GD/7] Length = 233 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 81/232 (34%), Gaps = 41/232 (17%) Query: 30 HVEDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPG 77 + ++I G++E ++ ++ ++ ++V L++ G Sbjct: 27 KANAGKHRIFLLSIIGEVEGHEQSPGNVKTTKYEHVLPQLAMAEDSCDIDGILVLLNTMG 86 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G AG AI I + KP ++ V + S G ++ +++ + G + Sbjct: 87 GDVEAGLAIAEMIASIS--KPTVSLVLGGSHSIGVPLAVSADYSFIVPS------GTMII 138 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +P + G+ I +++ + +Q+ + + R+ Sbjct: 139 HP-----VRMNGMVIGVIQTYEYF--------------ERIQERILNFIVTNSRIAKSHL 179 Query: 198 NIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIR 247 T L+ G + G E GLID +GG + L + + IR Sbjct: 180 KKLMLDTSKLAKDVGTVLDGQETVDCGLIDAIGGISDALAKLNEMIDEFQIR 231 >gi|257870013|ref|ZP_05649666.1| peptidase S14 [Enterococcus gallinarum EG2] gi|257804177|gb|EEV32999.1| peptidase S14 [Enterococcus gallinarum EG2] Length = 196 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AIF + +K Sbjct: 29 IIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGLAIFDTMNFIKAD- 87 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V MAAS G + A G F P + + + Sbjct: 88 -VQTIVMGMAASMGSFLLTAGEK------------GKRFALPNAEIMIHQ---------- 124 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTG 215 P+ +E+ A ++Q + +++SE P + +D R T Sbjct: 125 -PLGGAQGQATEIEIAARHILQ-----TRERLNKILSERTGQPIEVIEKDTD-RDNFMTA 177 Query: 216 AEAKKVGLIDVV 227 EAK GLID + Sbjct: 178 QEAKDYGLIDEI 189 >gi|114569888|ref|YP_756568.1| ATP-dependent Clp protease proteolytic subunit ClpP [Maricaulis maris MCS10] gi|122316141|sp|Q0AQ07|CLPP_MARMM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|114340350|gb|ABI65630.1| ATP-dependent Clp protease proteolytic subunit ClpP [Maricaulis maris MCS10] Length = 211 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G IED +I ++ + ++ + + ++SPGG AG I+ +Q +++ Sbjct: 37 IIFITGPIEDHMASLIIAQLLFLESENPKKEISMYINSPGGVVSAGLGIYDTMQYIRS-- 94 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T MAAS G L+ A AA + + + Sbjct: 95 PVSTMCLGMAASMGSLLLTAGEKDMRFAAPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWT 214 S + + S E + +Q ++ ++ Y YD+ L + Sbjct: 133 PSGGFRGQASDI-ERHAADIQKIKRRLNEIYVH-------HTGRTYDEIESALDRDNFMS 184 Query: 215 GAEAKKVGLIDVV 227 E + GL+D V Sbjct: 185 AQEGLEFGLVDKV 197 >gi|262381176|ref|ZP_06074314.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296353|gb|EEY84283.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 459 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQ--ELIERIERISRDDSATALI 70 +L+++T ++ + S E + I I+ +I+++ L + + +A A++ Sbjct: 4 LLTILTAIILILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQ-LNADAIL 62 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + +++ GG + +++ AI + + PV + AASAG LIS A I + + +G Sbjct: 63 LHMNTYGGLLESADSMRTAI--LYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIG 120 >gi|298346553|ref|YP_003719240.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063] gi|304389729|ref|ZP_07371688.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655110|ref|ZP_07908012.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii ATCC 51333] gi|315657032|ref|ZP_07909917.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236614|gb|ADI67746.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063] gi|304326905|gb|EFL94144.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315490591|gb|EFU80214.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii ATCC 51333] gi|315492424|gb|EFU82030.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 202 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 36/186 (19%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 + + + D + + + ++SPGGS AG AI+ +Q VK V+T MAAS G Sbjct: 45 AQMLLLAAEDPDSD-IYLYINSPGGSVTAGMAIYDTMQYVKPD--VVTVAMGMAASMGQF 101 Query: 114 ISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + A A + + + + Sbjct: 102 LLTAGTKGKRFATPHAR------ILMHQPLGGVQG------------------------T 131 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 V++ D++ + H ++ +E ++ +D W T EA + G ID V Sbjct: 132 ASEVRINADLILAMKHELAQITAERTGHTLEEITRDADRDHWFTAQEALEYGFIDAVVES 191 Query: 231 EEVWQS 236 QS Sbjct: 192 AAAVQS 197 >gi|251797382|ref|YP_003012113.1| peptidase S14 ClpP [Paenibacillus sp. JDR-2] gi|247545008|gb|ACT02027.1| peptidase S14 ClpP [Paenibacillus sp. JDR-2] Length = 247 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 77/196 (39%), Gaps = 43/196 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + LI ++ ++ +++ L++ GG AG AI I + KP +T V S Sbjct: 69 EHLIPQLVAAEQNSKIEGILIVLNTVGGDVEAGLAIAEMISSLS--KPTVTLVLGGGHSI 126 Query: 111 GYLISCASN-IIVAAETSLV-------G-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ A N +AA ++ G IGV + Y+ +++ + ++ S+ Sbjct: 127 GVPIAVAGNMSFIAATATMTIHPIRLNGLVIGVPQTFEYLDKMQERI-LKFVTMHSN--- 182 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 V + +++ F + T + G G++A K Sbjct: 183 --------VTEE---KFKEL------MFK---------TGELTRDI--GTTVIGSDAVKY 214 Query: 222 GLIDVVGGQEEVWQSL 237 GLID VGG + + L Sbjct: 215 GLIDAVGGLGDALREL 230 >gi|86158227|ref|YP_465012.1| hypothetical protein Adeh_1802 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774738|gb|ABC81575.1| hypothetical protein Adeh_1802 [Anaeromyxobacter dehalogenans 2CP-C] Length = 632 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Query: 39 ARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK- 97 A I G + ++++ ++ER SRD + A+++ + S GGS++AG A+ A++ + Sbjct: 28 AGIKDGGPVLQLRDVLAQLERASRDRAVGAVLLVVDSLGGSSWAGLALCEALRCLSEDGV 87 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLV 129 V+ V A SA + ++++ AA +++ Sbjct: 88 RVVAHVAGTAGSAAAVAILGADVVTAAPGAVI 119 >gi|325092382|gb|EGC45692.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces capsulatus H88] Length = 229 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++S ++ ++ + D+ + + ++SPGGS AG A++ + + Sbjct: 47 IVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA-- 104 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSV------MVHQ---------------- 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + D+ + + G Sbjct: 143 PSGGYFGQATDI-AIHAKEILRVRRQLNEIYKMHLTK-----EMSLDEIEKWMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AREALEMGIVDEI 209 >gi|240281120|gb|EER44623.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces capsulatus H143] Length = 229 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++S ++ ++ + D+ + + ++SPGGS AG A++ + + Sbjct: 47 IVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA-- 104 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSV------MVHQ---------------- 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + D+ + + G Sbjct: 143 PSGGYFGQATDI-AIHAKEILRVRRQLNEIYKMHLTK-----EMSLDEIEKWMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AREALEMGIVDEI 209 >gi|225562415|gb|EEH10694.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces capsulatus G186AR] Length = 229 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++S ++ ++ + D+ + + ++SPGGS AG A++ + + Sbjct: 47 IVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA-- 104 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSV------MVHQ---------------- 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + D+ + + G Sbjct: 143 PSGGYFGQATDI-AIHAKEILRVRRQLNEIYKMHLTK-----EMSLDEIEKWMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AREALEMGIVDEI 209 >gi|154279296|ref|XP_001540461.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces capsulatus NAm1] gi|150412404|gb|EDN07791.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces capsulatus NAm1] Length = 211 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++S ++ ++ + D+ + + ++SPGGS AG A++ + + Sbjct: 29 IVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA-- 86 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 87 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSV------MVHQ---------------- 124 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + D+ + + G Sbjct: 125 PSGGYFGQATDI-AIHAKEILRVRRQLNEIYKMHLTK-----EMSLDEIEKWMERDYFMG 178 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 179 AREALEMGIVDEI 191 >gi|89098789|ref|ZP_01171670.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL B-14911] gi|89086465|gb|EAR65585.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL B-14911] Length = 201 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D S ++ ++ + ++ + + ++SPGGS AG AI+ +Q ++ + Sbjct: 29 IIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSITAGMAIYDTMQYIRPK- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + Sbjct: 88 -VSTVCIGMAASMGAFLLAAGEKGKRFALPNSEV------MIH----------------- 123 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSDG 210 + Q + + + F+R ++SE P + +D Sbjct: 124 ------------QPLGGAQGQATEIEIAAKRILFLREKLNQILSERTGQPLEVIAKDTD- 170 Query: 211 R--IWTGAEAKKVGLIDVV 227 R T A + GLID + Sbjct: 171 RDNFMTAERALEYGLIDQI 189 >gi|297584649|ref|YP_003700429.1| hypothetical protein Bsel_2361 [Bacillus selenitireducens MLS10] gi|297143106|gb|ADH99863.1| protein of unknown function DUF107 [Bacillus selenitireducens MLS10] Length = 442 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 5/134 (3%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPH--VARIAIRGQIEDS-QELIERIERIS 61 +K + ML L+ F E + V I + ++E Q +ER R + Sbjct: 1 MKIWRIAIYMLILLAGISGLFIPVQQAESSGEGELVYVIPVEKEVERGLQAFLERSIRTA 60 Query: 62 RDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNII 121 ++ A+ +I + +PGG A I I+ + + E A SAG IS ++ I Sbjct: 61 EEEGASHIIFEVDTPGGFVDAAGGIASLIRNAEPD--TTAFIVERALSAGAYISLNADQI 118 Query: 122 VAAETSLVGSIGVL 135 V A S +GS V+ Sbjct: 119 VMAPGSNMGSATVV 132 >gi|13095787|ref|NP_076678.1| protease [Lactococcus phage bIL286] gi|15673378|ref|NP_267552.1| ATP dependent Clp protease [Lactococcus lactis subsp. lactis Il1403] gi|30089895|ref|NP_839925.1| putative ClpP protease [Lactococcus phage P335 sensu lato] gi|12724383|gb|AAK05494.1|AE006371_8 prophage pi3 protein 23, ATP dependent Clp protease [Lactococcus lactis subsp. lactis Il1403] gi|12830976|gb|AAK08331.1|AF323669_44 protease [Lactococcus phage bIL286] gi|21954684|gb|AAM83073.1|AF489521_34 putative ClpP protease [Lactococcus phage 4268] Length = 235 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 69/205 (33%), Gaps = 45/205 (21%) Query: 40 RIAIRGQIEDSQELI------------ERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 I I+G + D+ + ++ + ++++++S GG +A I+ Sbjct: 4 VIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASEIY 63 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+ N KPV + +AASA +I+ A + + + T+ L + + Sbjct: 64 TAIKM--NGKPVTVNIQGLAASAASVIAMAGDTVNISPTA------QLMIHKAMSG---- 111 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 S + + + + VD S L + L L Sbjct: 112 ---------SQGNADDF--------EQEAKVLNGVDQSIAAAYEL---KTGMKQSDLLQL 151 Query: 208 SDGRIW-TGAEAKKVGLIDVVGGQE 231 W T +A G D + + Sbjct: 152 MSNETWMTAQDAVDKGFADNIMFVD 176 >gi|125624869|ref|YP_001033352.1| hypothetical protein llmg_2097 [Lactococcus lactis subsp. cremoris MG1363] gi|290891540|ref|ZP_06554597.1| hypothetical protein AWRIB429_1987 [Oenococcus oeni AWRIB429] gi|124493677|emb|CAL98664.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|290478793|gb|EFD87460.1| hypothetical protein AWRIB429_1987 [Oenococcus oeni AWRIB429] gi|300071664|gb|ADJ61064.1| ATP dependent Clp protease [Lactococcus lactis subsp. cremoris NZ9000] Length = 234 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 69/205 (33%), Gaps = 45/205 (21%) Query: 40 RIAIRGQIEDSQELI------------ERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 I I+G + D+ + ++ + ++++++S GG +A I+ Sbjct: 3 VIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASEIY 62 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 AI+ N KPV + +AASA +I+ A + + + T+ L + + Sbjct: 63 TAIKM--NGKPVTVNIQGLAASAASVIAMAGDTVNISPTA------QLMIHKAMSG---- 110 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 S + + + + VD S L + L L Sbjct: 111 ---------SQGNADDF--------EQEAKVLNGVDQSIAAAYEL---KTGMKQSDLLQL 150 Query: 208 SDGRIW-TGAEAKKVGLIDVVGGQE 231 W T +A G D + + Sbjct: 151 MSNETWMTAQDAVDKGFADNIMFVD 175 >gi|256074339|ref|XP_002573483.1| peptidase Clp (S14 family) [Schistosoma mansoni] gi|238658663|emb|CAZ29715.1| peptidase Clp (S14 family) [Schistosoma mansoni] Length = 632 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D + +I ++ + +D T + + ++SPGGS AG AI+ +Q ++ Sbjct: 70 IICLMGAVTDEMAGSVIAQLLFLQSEDKRTPIHLYINSPGGSVTAGLAIYDTMQFIRP-- 127 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A+S G L+ A + A S SI V + + + + Sbjct: 128 PVATFCIGQASSMGSLLLAAGSHGCRFALPHS---SIMVHQPSGSAHGQASDIKIRAEEL 184 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ ++++ +D Y T Sbjct: 185 IRTR-SVINTIYERHTKQSQEVIEKWMDRDY-------------------------FMTA 218 Query: 216 AEAKKVGLIDVV 227 EA G++D V Sbjct: 219 EEAVSYGIVDRV 230 >gi|289577854|ref|YP_003476481.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermoanaerobacter italicus Ab9] gi|297544142|ref|YP_003676444.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527567|gb|ADD01919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter italicus Ab9] gi|296841917|gb|ADH60433.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 195 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G+ I D+ +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGFAIYDTMQYIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T MAAS A +L++ + A S + + + + Sbjct: 88 --VVTLCVGMAASMAAFLLAAGAKGKRFALPNSE------IMIHQPLGGMHGQ------- 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ +K ++ + + ++D +D ++E+ P +K ++ + Sbjct: 133 --ATDIK--------IHAERILKLRDKLDRI-------LAENTGQPIEKIKADTERDFFM 175 Query: 214 TGAEAKKVGLIDVV 227 +AK G+ID V Sbjct: 176 DAEDAKAYGIIDEV 189 >gi|88763681|gb|ABD49510.1| capsid protein [Wolbachia phage WO] Length = 118 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q VD Y FV+L++ +RN+ ++ ++ G +A ++GL D V E + Sbjct: 1 LQKEVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFINNH 59 Query: 238 YALGVDQSIRKIKDWNPPKN 257 + V + ++ + N + Sbjct: 60 KSRSVSMTTDELIEENYRRE 79 >gi|253996690|ref|YP_003048754.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera mobilis JLW8] gi|253983369|gb|ACT48227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera mobilis JLW8] Length = 214 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 36/200 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D + ++ ++ + ++ + + ++SPGGS AG +I+ +Q +K Sbjct: 46 VIFLVGPVNDMSANLVVAQLLFLEAENPDKDISLYINSPGGSVTAGMSIYDTMQFIKPD- 104 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L++ + + + S + + Sbjct: 105 -VSTLCIGQAASMGAFLLAAGAKDKRYSLPNSR------IMIHQ---------------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + S E++ K + ++ ++ +E + ++ + Sbjct: 142 PSGGFQGQSSDI-EIHAKEILYLRAKLNDILAHHTGRTAEEIDRDTERDN------FMSA 194 Query: 216 AEAKKVGLIDV-VGGQEEVW 234 ++ GLID +G + E Sbjct: 195 EQSVAYGLIDKVIGSRNEAV 214 >gi|86357052|ref|YP_468944.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CFN 42] gi|116243105|sp|Q2KAB9|CLPP1_RHIEC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|86281154|gb|ABC90217.1| endopeptidase Clp, subunit 1 protein [Rhizobium etli CFN 42] Length = 202 Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 36/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + D + + ++SPGG+ +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEADPE-KPINLYINSPGGAVTSGLAMYDTMRFIRA-- 89 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 90 PVHTLCMGTARSMGSFLLMAGEPGERAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 146 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F R + D R T Sbjct: 147 ----LKTKQRMTR--------LYAEHCGRSYEDF------ERGMDRD--------RFMTA 180 Query: 216 AEAKKVGLIDVV 227 EA + GLI+ + Sbjct: 181 EEALEWGLIERI 192 >gi|229821079|ref|YP_002882605.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333] gi|229566992|gb|ACQ80843.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333] Length = 213 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ ++ ++ ++ +D + + ++SPGGS AG AI+ +Q V+ V T MA Sbjct: 48 DNANQICGQMMLLAAEDPTKDIWLYINSPGGSVTAGMAIYDTMQYVQPD--VATVAMGMA 105 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L++ + A + V+ P S + + Sbjct: 106 ASMGQFLLASGAKGKRYATPHAR-----VMMHQP-----------------SGGIGGTAT 143 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 ++ L +E ++ +D R +T EA++ G I Sbjct: 144 DIRINAE--------LILHMKRVMAELTAEQTGKTVEQVNADADRDRWFTAEEAREYGFI 195 Query: 225 DVV 227 D V Sbjct: 196 DHV 198 >gi|322381666|ref|ZP_08055631.1| ATP-dependent Clp protease proteolytic subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154378|gb|EFX46689.1| ATP-dependent Clp protease proteolytic subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 238 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 47/209 (22%) Query: 31 VEDNSPHVARIAIRGQI---------EDSQELIERIERISRDDSATALIVSLSSPGGSAY 81 + + A I I G I + E ++R+ + + ++SPGGS + Sbjct: 1 MSADGSSSADIFIYGDIVTYQWDEVDTSATSFKEDLDRLGDLSTIN---LYINSPGGSVF 57 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G AI +++ K V V +AAS +I+ A + + S+ L + Sbjct: 58 EGIAIHNMLKRHKAN--VHVHVDALAASIASVIAMAGDPFYMPKNSM------LMIH--- 106 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYH--WFVRLVSESRNI 199 + N ++ + D +D + V L + Sbjct: 107 ---------NPWIFAWG------------NASEMRKIADDLDRIGNSSKQVYLQKAGDKL 145 Query: 200 PYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +K + D W + EA + GL DVV Sbjct: 146 SDEKLQDMLDAETWLSADEAFEYGLCDVV 174 >gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius LAA1] gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius LAA1] gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 192 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ DD + + ++SPGGS AG AI+ +Q + K Sbjct: 29 IIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGLAIYDTMQHI---K 85 Query: 98 PVITEVH-EMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P ++ + MAAS A L++ + A S V + + + I+ Sbjct: 86 PDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEV------MIHQPLGGARGQAS-DIEI 138 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +K + + ++ + V++ D+ + Sbjct: 139 HARHILK------------TRERLNRILAERTGQPLERVAQ----DTDRDN------FMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK GLID V Sbjct: 177 AEEAKAYGLIDEV 189 >gi|188589670|ref|YP_001921112.1| peptidase S14, ClpP [Clostridium botulinum E3 str. Alaska E43] gi|188499951|gb|ACD53087.1| peptidase S14, ClpP [Clostridium botulinum E3 str. Alaska E43] Length = 377 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 35/190 (18%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 GQI S + E+++ D+ T V ++S GG + AI+ ++ K + ++ Sbjct: 32 DGQITAS-DFKEQLDLYKDRDNIT---VRINSNGGDVFTASAIYTLLKDCKAS--ITVKI 85 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 MA SA +++ A + ++ TS+ + + VS Sbjct: 86 DGMAMSAATVVAMAGDKVLIPSTSI------FMIHDPLAGLCGYYNVS----------DL 129 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVG 222 + ++ ++ ++ + + ++ L +W TG +A G Sbjct: 130 EKVINRLSVVKNTIINAYINKT------------DKTKEEIEDLMTNELWLTGEDAVNEG 177 Query: 223 LIDVVGGQEE 232 D V E Sbjct: 178 FCDEVMFSET 187 >gi|88860444|ref|ZP_01135082.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas tunicata D2] gi|88817642|gb|EAR27459.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas tunicata D2] Length = 205 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ + + K Sbjct: 38 VIFLTGQVEDHMANLIVAQLLFLESENPEKDIFIYINSPGGSVTAGMAIYDTMNFI---K 94 Query: 98 P-VITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P V T AAS +L+S + S V + + + Sbjct: 95 PNVSTVCMGQAASMGAFLLSGGTKGKRFCLPNSRV------MIHQPLGGFQGQASDFEIH 148 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + S + ++ + ++S R+ D Sbjct: 149 AREILS----------------IKDKLNRLLAEHTGQPIEVIS--RDTDRDN-------- 182 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 +GA+A + G++D V Q ++ Sbjct: 183 FMSGAQAVEYGIVDAVLTQRDL 204 >gi|126461414|ref|YP_001042528.1| peptidase S14, ClpP [Rhodobacter sphaeroides ATCC 17029] gi|126103078|gb|ABN75756.1| peptidase S14, ClpP [Rhodobacter sphaeroides ATCC 17029] Length = 282 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 92/260 (35%), Gaps = 44/260 (16%) Query: 41 IAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I+I G I D +RI R ++V+++SPGG + G AI+ +++ K Sbjct: 45 ISILGVIGSDFWDEGVTAKRISAALRAIGPRDVVVNINSPGGDVFEGLAIYSLLREHKGH 104 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V +V +AASA +I+ A++ ++ A G L + +G + Sbjct: 105 --VTVKVLGLAASAASVIAMAADDLLIARA------GFLMIHNT------WVGAAGDRHA 150 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 PF + Y + + + + D W G Sbjct: 151 LREAADLLEPF-----------DAALADIY-------AARSGVSAAEISAMLDKETWMGG 192 Query: 216 AEAKKVGLIDVVGGQEEVW-----QSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISS 270 +EA G D + + V Q+ +D ++ K + L + Sbjct: 193 SEAIAAGFADGLLSSDAVAEDEQPQASALRRLDAALAKSGMPRSERRRLCNQLFAKPGAG 252 Query: 271 LLEDTIPLMKQTKVQGLWAV 290 ++ +P +T+ GL A+ Sbjct: 253 --DEGMPRAAETEADGLSAL 270 >gi|161830099|ref|YP_001597323.1| nfeD family protein [Coxiella burnetii RSA 331] gi|161761966|gb|ABX77608.1| nfeD family protein [Coxiella burnetii RSA 331] Length = 458 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 14/160 (8%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQI--EDSQELIERIER 59 + K+I R + ++T ++ + ++N+ +A I I+G I + +++ Sbjct: 2 YCRKRIFIRCFYILMLTFGLLGIASHIIAQNNTRRLAILIDIKGGIGPATADFFHRSLKQ 61 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISC 116 + A +I+ L +PGG A I + I + + PVI V AASAG I Sbjct: 62 ATE-KKAQVIILQLDTPGGLVTAMRDIIKDI--LASPIPVIGYVAPSGAHAASAGTYILY 118 Query: 117 ASNIIVAAETSLVG-----SIGVLFQYPYVKPFLDKLGVS 151 A++I A + +G +IG K K G Sbjct: 119 ATHIAAMAPGTNLGAATPIAIGTPGGSSPEKGNEKKEGAK 158 >gi|238060619|ref|ZP_04605328.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] gi|237882430|gb|EEP71258.1| endopeptidase Clp [Micromonospora sp. ATCC 39149] Length = 213 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ ++ +D + + ++SPGGS Y+G AI+ +Q + N V T MAAS Sbjct: 50 ANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYDTMQYIDND--VSTVAMGMAAS 107 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ CA A + + + P Sbjct: 108 MGQLLLCAGTKGKRYALPHAR------IMMHQ-------------------PSGGMGGTA 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 S++ +A QM+ + F V+ + SD R +T EA G ID Sbjct: 143 SDIAIQAEQMLY-----TKRMFQERVAFHTGQTQAQIEADSDRDRWFTAQEAMDYGFIDK 197 Query: 227 V 227 V Sbjct: 198 V 198 >gi|331017560|gb|EGH97616.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 335 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 40/214 (18%) Query: 41 IAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G+I + + I+ ++ I DD + ++ + ++ GG + G AI A+ ++ R Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAI--DDGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER 97 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + +AASAG + +C ++ +V A ++ L + + + Sbjct: 98 --CTARIDALAASAGSVAACGAHRMVMASNAM------LMIH------------NPWTYT 137 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL-VSESRNIPYDKTLVLSDGRIW-T 214 + + ++ + DV+D + + ++S +I + + + W T Sbjct: 138 AGD------------AEDLRKVADVLDQTLEAIIAAYKAKSPDIDEVELRRMVNAETWLT 185 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRK 248 EA +GL D +G EV L Q R+ Sbjct: 186 APEALALGLADEIGAGVEVKACLGQGAAIQRFRQ 219 >gi|71000128|ref|XP_754781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus fumigatus Af293] gi|66852418|gb|EAL92743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus fumigatus Af293] gi|159127789|gb|EDP52904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus fumigatus A1163] Length = 175 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 31/181 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S ++ ++ + D+ + + ++SPGGS AG AI+ + + + PV T AAS Sbjct: 2 SASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIAS--PVSTICVGQAAS 59 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ C + S SI + S + S Sbjct: 60 MGSLLLCGGDPGKRYCLPHS---SI---MIHQ----------------PSGGYFGQASDI 97 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDV 226 ++ K + +++ ++ Y R ++ + + ++ L + + GA+ A ++G++D Sbjct: 98 -AIHAKEILRVRNQLNKIYQ---RHLTGKKVLSLEEIEKLMERDYFMGAQEALEMGIVDE 153 Query: 227 V 227 + Sbjct: 154 I 154 >gi|291545120|emb|CBL18229.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus sp. 18P13] Length = 243 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I + I +D S L++ L++ GG AG AI + +K P ++ V S Sbjct: 66 EHIIPALVAIEQDRSIEGLLIILNTVGGDVEAGLAIAELLAGMKT--PTVSLVVGGGHSI 123 Query: 111 GYLISCASNI-IVAAETSLV-------GSI-GVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ ++ + ++ G I GV Y K D++ V+ + S Sbjct: 124 GVPLAVSAKRSFIVPSATMTIHPVRMNGMIVGVPQTLSYFKKMQDRI-VNFVTANSG--- 179 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 ++ + + + + V V G + G A ++ Sbjct: 180 --------ISEQQFRALMMETEEL----VMDV----------------GTVVDGERAVEL 211 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID +GG + LY L Sbjct: 212 GLIDSLGGLSDAVACLYGL 230 >gi|29654774|ref|NP_820466.1| nfeD family protein [Coxiella burnetii RSA 493] gi|29542042|gb|AAO90980.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii RSA 493] Length = 458 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 14/160 (8%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQI--EDSQELIERIER 59 + K+I R + ++T ++ + ++N+ +A I I+G I + +++ Sbjct: 2 YCRKRIFIRCFYILMLTFGLLGIASHIIAQNNTRRLAILIDIKGGIGPATADFFHRSLKQ 61 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISC 116 + A +I+ L +PGG A I + I + + PVI V AASAG I Sbjct: 62 ATE-KKAQVIILQLDTPGGLVTAMRDIIKDI--LASPIPVIGYVAPSGAHAASAGTYILY 118 Query: 117 ASNIIVAAETSLVG-----SIGVLFQYPYVKPFLDKLGVS 151 A++I A + +G +IG K K G Sbjct: 119 ATHIAAMAPGTNLGAATPIAIGTPGGSSPEKGNEKKEGAK 158 >gi|319783748|ref|YP_004143224.1| endopeptidase Clp [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169636|gb|ADV13174.1| Endopeptidase Clp [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 201 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G+I D S + ++ + D+ + + ++SPGG +G AI+ +Q + Sbjct: 33 IIFINGEINDDISALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMQYISC-- 90 Query: 98 PVITEVHEMAASAG---YLISCASNIIVAAETSL-----VGSIGVLFQYPYVKPFLDKLG 149 PV T AAS G + I ++ +G G Q ++ +++G Sbjct: 91 PVSTVCMGFAASMGSFLLMAGTPGRRISLPNATILLHQPLG--GFQGQASDIQRHAERIG 148 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + + ++ +Y R + D Sbjct: 149 RTKRHMT-------------------ELYAQHCGRTYEEV------ERTLDRD------- 176 Query: 210 GRIWTGAEAKKVGLIDVV 227 T EA+ G++D V Sbjct: 177 -HFMTAREAQAWGIVDHV 193 >gi|299144162|ref|ZP_07037242.1| nodulation efficiency protein D (NfeD) [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518647|gb|EFI42386.1| nodulation efficiency protein D (NfeD) [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 426 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 86/240 (35%), Gaps = 62/240 (25%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAG 83 S + +N+P + I I+ +I + + + I+ D + +I + + GGS A Sbjct: 16 SNEAFANENTPVI--IPIKSEINSAMATYVRDSIKNA-EDKKSPLIIFEIDTYGGSIIAA 72 Query: 84 EAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 E I I + ++ P + V+ A SAG LI+ A + ++T+ +GS Sbjct: 73 EKIKNYI--IDSKIPTVAFVNNKAESAGVLITIACKNVYMSKTATIGS------------ 118 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK 203 +++ K + + ++ + ++ R Sbjct: 119 --------AETI-------------PKTEKNISFWKGMLRDT--------AQYRGRNEQI 149 Query: 204 TLVLSDGRIW-------------TGAEAKKVGLIDVV-GGQEEVWQSLYALGVDQSIRKI 249 ++D I+ T E+ +G+ D V E++ + G I K+ Sbjct: 150 IESMADSDIYIPMIIEKGKLTNLTSKESLDLGISDGVANNYEDILKQFNLDGKKYEIAKM 209 >gi|154707166|ref|YP_001423941.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii Dugway 5J108-111] gi|154356452|gb|ABS77914.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii Dugway 5J108-111] Length = 458 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 14/160 (8%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQI--EDSQELIERIER 59 + K+I R + ++T ++ + ++N+ +A I I+G I + +++ Sbjct: 2 YCRKRIFIRRFYILMLTFGLLGIASHIIAQNNTRRLAILIDIKGGIGPATADFFHRSLKQ 61 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISC 116 + A +I+ L +PGG A A I + I + + PVI V AASAG I Sbjct: 62 ATE-KKAQVIILQLDTPGGLATAMRDIIKDI--LASPIPVIGYVAPSGAHAASAGTYILY 118 Query: 117 ASNIIVAAETSLVG-----SIGVLFQYPYVKPFLDKLGVS 151 A++I A + +G +IG K K G Sbjct: 119 ATHIAAMAPGTNLGAATPIAIGTPGGSSPEKGNEKKEGAK 158 >gi|237751093|ref|ZP_04581573.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis ATCC 43879] gi|229373538|gb|EEO23929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis ATCC 43879] Length = 196 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 37/195 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I+DS ++ ++ + +D + + ++SPGGS +G +I+ + +K Sbjct: 29 IIMLSGEIDDSVSSSIVAQLLFLEAEDPQKDVFLYINSPGGSVTSGFSIYDTMNYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T AAS +L+SC + A + + + + Sbjct: 88 -ICTICVGQAASMGAFLLSCGTKGKRYALPHAR------IMIHQPLGGA----------- 129 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++ + K + + + Sbjct: 130 -RGQATDI-----EIQAKEILRLKTIINDI-------LAANTGQSVKKITQDCERDFYMS 176 Query: 215 GAEAKKVGLIDVVGG 229 EA+K GLID V Sbjct: 177 ADEAQKYGLIDSVMT 191 >gi|91204189|emb|CAJ71842.1| hypothetical protein kustc1097 [Candidatus Kuenenia stuttgartiensis] Length = 546 Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 5/134 (3%) Query: 29 SHVEDNSPH-VARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +VED + I I I+ I+R ++D +A +I + + GG A I Sbjct: 82 PNVEDTTHRPTYVITIHRMIDGGLNSSIQRRVDSAKDKNAGLIIFDIDTFGGRLDAAMEI 141 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 I +K K V + A SAG LI+ + N I+ A + +G + P + Sbjct: 142 SEFISDLKEAKTV-AFISHKAISAGALIALSCNDIIMAPDAELGDCEPIL--PTTEGGYK 198 Query: 147 KLGVSIKSVKSSPM 160 G I++V + Sbjct: 199 SAGEKIQTVLRTKF 212 >gi|326693258|ref|ZP_08230263.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc argentinum KCTC 3773] Length = 200 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + ++G+IEDS ++ ++ + D + + ++SPGGS AG +I + +K Sbjct: 27 IVLVQGEIEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIKA-- 84 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T V +AAS G +I+ + G F P + + + Sbjct: 85 PVTTIVMGLAASMGTIIASSGEK------------GHRFMLPNAEYLIHQP--------- 123 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + ++ + + + R+++++ + ++ W + Sbjct: 124 -----MGGAAGGTQQTDMAIIAEQLTKTRAKLNRILADASGKDLETIAHDTERDYWMSAE 178 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 179 ETLEYGFIDGI 189 >gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748] gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748] Length = 197 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q + K Sbjct: 28 IIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQYI---K 84 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + V A+ L++ + A + V + V+ ++ + Sbjct: 85 PDVSTICVGSAASMGAVLLTAGAKGKRYALPHARV------MIHQPLGGVQGQASEIEIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ S + +V+ R+ D Sbjct: 139 AREILR----------------MREELNGILASRSGQDIEVVA--RDTDRDN-------- 172 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GLID V +E V Sbjct: 173 FMSAQDAVEYGLIDEVLTREPV 194 >gi|94968588|ref|YP_590636.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus Koribacter versatilis Ellin345] gi|116243126|sp|Q1IRD8|CLPP_ACIBL RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|94550638|gb|ABF40562.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus Koribacter versatilis Ellin345] Length = 194 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 69/194 (35%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + +I ++ + +D + + ++SPGGS AG AI+ +Q ++ Sbjct: 28 IIFLGTPIDDNVANLIIAQMLFLEAEDPEKDISLYINSPGGSITAGMAIYDTMQFIRPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQ--YPYVKPFLDKLGVSIK 153 V T AS L++ + A TS + ++ Q + + + + Sbjct: 87 -VATICIGQCASMGATLLASGAPGKRYALPTSRI----LIHQPLMSGLSGQATDIDIHAR 141 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + ++ ++ + + V + I Sbjct: 142 EILR----------------MREITNQLLAKHCNQRLEKVEK-------DVERDF---IM 175 Query: 214 TGAEAKKVGLIDVV 227 +AK+ GL+D + Sbjct: 176 NAQQAKEYGLVDDI 189 >gi|52080286|ref|YP_079077.1| translocation-enhancing protein [Bacillus licheniformis ATCC 14580] gi|52785663|ref|YP_091492.1| TepA [Bacillus licheniformis ATCC 14580] gi|319645933|ref|ZP_08000163.1| TepA protein [Bacillus sp. BT1B_CT2] gi|52003497|gb|AAU23439.1| translocation-enhancing protein [Bacillus licheniformis ATCC 14580] gi|52348165|gb|AAU40799.1| TepA [Bacillus licheniformis ATCC 14580] gi|317391683|gb|EFV72480.1| TepA protein [Bacillus sp. BT1B_CT2] Length = 248 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 76/204 (37%), Gaps = 53/204 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I + ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 71 EHVIPQIVAVEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 128 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ + + AET+ + +P + + +GV Sbjct: 129 GVPIAVSCDHSYIAETA------TMTIHPVRLTGLV--IGV------------------P 162 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GA 216 + + MQ+ V + V+ NI +K L +++ G Sbjct: 163 QTFEYLDKMQERV-------INFVTSHSNISEEKFKEL----MFSKGNLTRDIGTNVVGN 211 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 +A K GLID GG + Q L L Sbjct: 212 DAVKYGLIDETGGVGQAIQKLNEL 235 >gi|323495056|ref|ZP_08100145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis LMG 20546] gi|323310713|gb|EGA63888.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis LMG 20546] Length = 208 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 IIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRHVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ +E P + +D R Sbjct: 153 AQEILT----------------IKQKLNKLL-----------AEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 185 DNFMSADQAVEYGLVDSV 202 >gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella marina EX-H1] gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella marina EX-H1] Length = 202 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + +I ++ + +D + + ++SPGG +G AI+ ++ +K Sbjct: 38 IIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPGGVVTSGLAIYDTMRYIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T AAS +L+S + A +S + + + F Sbjct: 97 -VVTICMGQAASMGAFLLSAGAKGKRYALPSSR------IMIHQPLGGFQ---------- 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E++ K + ++ ++ ++E P +K ++ + + Sbjct: 140 --GQATDI-----EIHAKEILRLKKYLNE-------RLAEHTGQPLEKIERDTERDFFMS 185 Query: 215 GAEAKKVGLIDVV 227 +A + GLID V Sbjct: 186 AHDAVEYGLIDKV 198 >gi|332653082|ref|ZP_08418827.1| Clp protease [Ruminococcaceae bacterium D16] gi|332518228|gb|EGJ47831.1| Clp protease [Ruminococcaceae bacterium D16] Length = 236 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 89/247 (36%), Gaps = 63/247 (25%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLS 74 SS ++ + V + I GQ+E Q ++ + + ++ L+V L+ Sbjct: 25 GSSIIQTSKGTVHVLTIVGQVEGHQVLPPSSKSTKYEHVMPLLAMVEESEAIDGLLVLLN 84 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS------- 127 + GG AG I I + KP ++ V S G ++ ++ A ++ Sbjct: 85 TVGGDVEAGLGIAELIAGMS--KPTVSLVLGGGHSIGVPLAVSAKRSFIAPSAAMTIHPV 142 Query: 128 ----LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 LV IGV + Y + +++ ++ K + F+E+ Sbjct: 143 RLNGLV--IGVPQTFYYFERVQERI----TQFVTANSKIKRETFTEL------------- 183 Query: 184 SSYHWFVRLVSESRNIPYDKTLVLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALG 241 KT L+ G + G EA ++GLID +GG L+ + Sbjct: 184 -----------------MLKTGELAADVGSVIYGQEAVELGLIDEIGGLSSALDCLHGMI 226 Query: 242 VDQSIRK 248 ++ + Sbjct: 227 RERRAAE 233 >gi|209694398|ref|YP_002262326.1| ATP-dependent Clp protease proteolytic subunit [Aliivibrio salmonicida LFI1238] gi|226706438|sp|B6EHK3|CLPP_ALISL RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|208008349|emb|CAQ78503.1| ATP-dependent Clp protease proteolytic subunit [Aliivibrio salmonicida LFI1238] Length = 207 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 73/203 (35%), Gaps = 47/203 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + + ++ +E P + +D R Sbjct: 153 AQEILT----------------IKKKLNTLL-----------AEHTGQPLEVIEKDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVVGGQEE 232 +A K GL+D V + + Sbjct: 185 DNFMAADDAVKYGLVDAVLNKRD 207 >gi|87125532|ref|ZP_01081377.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp. RS9917] gi|86166832|gb|EAQ68094.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp. RS9917] Length = 200 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 70/181 (38%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + DDS+ + + ++SPGGS AG AI+ +Q VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSDDSSKPIYLYINSPGGSVTAGLAIYDTMQYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A S + + + + Sbjct: 102 MGAFLLAAGTKGKRLALPHSR------IMIHQPLGGTAQRQ------------------- 136 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +++ + + R ++ ++ +D + + EAK GLID Sbjct: 137 ----ASDIEIEANEILRIKEMLNRSMAAMTGKSFETIEKDTDRDYFLSAEEAKDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|15892669|ref|NP_360383.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia conorii str. Malish 7] gi|15619841|gb|AAL03284.1| ATP-dependent clp protease proteolytic subunit [Rickettsia conorii str. Malish 7] Length = 216 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 59 IVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 116 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 117 LLLCGGEK------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 155 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 156 QETLKIKRLLNELYSKHTEQELKHIEKSMERDN------FMSPEEAKKFGLVDNIMSSRD 209 Query: 233 VWQSLYA 239 L Sbjct: 210 AMALLAK 216 >gi|296333303|ref|ZP_06875756.1| putative membrane bound hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675192|ref|YP_003866864.1| putative membrane bound hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149501|gb|EFG90397.1| putative membrane bound hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413436|gb|ADM38555.1| putative membrane bound hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 437 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 3/102 (2%) Query: 30 HVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 + + V I + +E + R + +++ A +I+ +++PGG + I Sbjct: 25 NAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKEAHADHIILDINTPGGLVKSAIDIAD 84 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 +I + + PV V++ A SAG I+ ++ I A +G Sbjct: 85 SITE--SEIPVTAYVNKRALSAGAYIALQADNIYMAPGGKMG 124 >gi|262198158|ref|YP_003269367.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haliangium ochraceum DSM 14365] gi|262081505|gb|ACY17474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haliangium ochraceum DSM 14365] Length = 207 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 72/178 (40%), Gaps = 35/178 (19%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 +I ++ + +D +++ ++SPGGS AG AI+ +Q ++ V T A+S Sbjct: 52 IIAQLLHLESEDPEKDIMLYINSPGGSVTAGLAIYDTMQYLRCD--VATICMGQASSMGA 109 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L++ + A + V + P+ P +++ Sbjct: 110 FLLAAGAKGKRFALPHARV------MIHQ-------------------PLGGFSGPATDI 144 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + A ++++ + R+++E P D+ ++ + + EA GLID V Sbjct: 145 DIYAREVLK-----TRETLNRVLAEHTGQPLDRIAEDTERDYFMSADEACAYGLIDEV 197 >gi|220906939|ref|YP_002482250.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC 7425] gi|219863550|gb|ACL43889.1| Endopeptidase Clp [Cyanothece sp. PCC 7425] Length = 198 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 76/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + +++ + + +D +++ ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIVLYINSPGGSVTAGMAIYDTMQHIKSD- 90 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ + +A S + + Sbjct: 91 -VVTICVGLAASMGSFLLTAGAPGKRLALPHSR------IMIH------------QPSGG 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ + + ++ ++ Y ++ P +K D + + Sbjct: 132 TRGQASDI-----EIEAREIIRIRHQLNQIY-------ADRTGQPLEKIEKDIDRDYFMS 179 Query: 215 GAEAKKVGLIDVV 227 EAK GLID V Sbjct: 180 AQEAKDYGLIDRV 192 >gi|167758267|ref|ZP_02430394.1| hypothetical protein CLOSCI_00605 [Clostridium scindens ATCC 35704] gi|167664164|gb|EDS08294.1| hypothetical protein CLOSCI_00605 [Clostridium scindens ATCC 35704] Length = 241 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 88/240 (36%), Gaps = 41/240 (17%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSL 73 S + + + + + I G+IE + L+ + + + +++ L Sbjct: 28 SINLNENKDRHRIKLLTIIGEIEGHEAVAGNTKATKYEHLLPMLAEVEDSEEIEGVLILL 87 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGS 131 ++ GG AG +I I + KP ++ V + S G ++ ++ + ++ Sbjct: 88 NTMGGDVEAGLSIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSAKYSFIVPSGTMIIHP 145 Query: 132 IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR 191 + + V+ L + + + S S + + ++ + +++ Sbjct: 146 VRSNGMFIGVEQSLRNMIRTQDRIT-----RFLSQHSHMTQERIEEL--MLN-------- 190 Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 P + + G + G EA K GLID VGG E L+ + +K ++ Sbjct: 191 --------PTELVKDV--GTLLEGEEAVKEGLIDEVGGMSEALNKLHEMIDQSRQKKYEN 240 >gi|301311154|ref|ZP_07217082.1| serine protease, ClpP class [Bacteroides sp. 20_3] gi|300830728|gb|EFK61370.1| serine protease, ClpP class [Bacteroides sp. 20_3] Length = 459 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 12/123 (9%) Query: 14 MLSLVTLTVVYFSWSSHVEDNSPH-VARIAIRGQIEDSQEL-----IERIERISRDDSAT 67 +L+++T V+ + S E + I I+ +I+++ + + +++S D Sbjct: 4 LLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQLSAD---- 59 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A+++ +++ GG + +++ AI + + PV + AASAG LIS A I + + Sbjct: 60 AILLHMNTYGGLLESADSMRTAI--LYSPIPVYVFIDNNAASAGALISIACKKIYMRKGA 117 Query: 128 LVG 130 +G Sbjct: 118 NIG 120 >gi|255595220|ref|XP_002536256.1| conserved hypothetical protein [Ricinus communis] gi|223520293|gb|EEF26129.1| conserved hypothetical protein [Ricinus communis] Length = 101 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 9/105 (8%) Query: 192 LVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 +V E R + G WTG+ ++GLID +G + + + V + Sbjct: 1 MVLERRTGKLSADETVFSGLFWTGSRGLELGLIDGLGDMRQELRKRFGDKVKPML----- 55 Query: 252 WNPPKNYWFCDLKNLSISSL----LEDTIPLMKQTKVQGLWAVWN 292 P++ + +S+ S+ L + + + LW+ + Sbjct: 56 ITTPRSLFGRKAPGISLGSMDGLGAGLASGLAEAAEERALWSRYG 100 >gi|229191943|ref|ZP_04318913.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus ATCC 10876] gi|228591494|gb|EEK49343.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus ATCC 10876] Length = 233 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 55/190 (28%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAG 111 ++ + + + DD LIVS++SPGG + G I+ A++ V ++ +AASA Sbjct: 8 KISKELTNANGDD----LIVSINSPGGYVHEGSEIYTALKNYPGN--VEVQIVGLAASAA 61 Query: 112 YLISCASNIIVAAETSLV----GSIGVLFQYPYVKPFLDKLG------VSIKSVKSSPMK 161 +I+ A + + + T+ + S+ + ++ + L V+ +KS Sbjct: 62 SVIAMAGDKVRISPTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGK-- 119 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 +++ + + ++ +A + Sbjct: 120 -----------SEKELLNMMAEETWMR--------------------------PQQALEN 142 Query: 222 GLIDVVGGQE 231 +D + + Sbjct: 143 NFVDEIMFMD 152 >gi|169634426|ref|YP_001708162.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii SDF] gi|169797267|ref|YP_001715060.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii AYE] gi|184156807|ref|YP_001845146.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii ACICU] gi|213155939|ref|YP_002317984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii AB0057] gi|215484708|ref|YP_002326943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii AB307-0294] gi|239500790|ref|ZP_04660100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii AB900] gi|260549098|ref|ZP_05823319.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. RUH2624] gi|260556149|ref|ZP_05828368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii ATCC 19606] gi|301346762|ref|ZP_07227503.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii AB056] gi|301512252|ref|ZP_07237489.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii AB058] gi|301594241|ref|ZP_07239249.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii AB059] gi|332851226|ref|ZP_08433299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acinetobacter baumannii 6013150] gi|332866080|ref|ZP_08436808.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acinetobacter baumannii 6013113] gi|332873220|ref|ZP_08441177.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acinetobacter baumannii 6014059] gi|169150194|emb|CAM88088.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5) [Acinetobacter baumannii AYE] gi|169153218|emb|CAP02314.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5) [Acinetobacter baumannii] gi|183208401|gb|ACC55799.1| Protease subunit of ATP-dependent Clp protease [Acinetobacter baumannii ACICU] gi|193076289|gb|ABO10931.2| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii ATCC 17978] gi|213055099|gb|ACJ40001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii AB0057] gi|213988734|gb|ACJ59033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii AB307-0294] gi|260407826|gb|EEX01298.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp. RUH2624] gi|260410204|gb|EEX03503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter baumannii ATCC 19606] gi|322506699|gb|ADX02153.1| clpP [Acinetobacter baumannii 1656-2] gi|323516573|gb|ADX90954.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter baumannii TCDC-AB0715] gi|332730106|gb|EGJ61433.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acinetobacter baumannii 6013150] gi|332734826|gb|EGJ65919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acinetobacter baumannii 6013113] gi|332738732|gb|EGJ69602.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acinetobacter baumannii 6014059] Length = 201 Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 36 VIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V+T AAS +L++ + E + V + + + + Sbjct: 95 -VVTYCMGQAASMGAFLLNAGAKGKRYCLENARV------MIHQPLGGFRGQASDIEIHA 147 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ ++ R+ D Sbjct: 148 REIL----------------FIKERLNRLMAEHSGQDYDTIA--RDTDRDN--------F 181 Query: 213 WTGAEAKKVGLIDVV 227 T AK+ GL+D V Sbjct: 182 MTAQAAKEYGLVDQV 196 >gi|153835695|ref|ZP_01988362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio harveyi HY01] gi|156973712|ref|YP_001444619.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi ATCC BAA-1116] gi|269961045|ref|ZP_06175414.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi 1DA3] gi|226706635|sp|A7MV87|CLPP_VIBHB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|148867676|gb|EDL66952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio harveyi HY01] gi|156525306|gb|ABU70392.1| hypothetical protein VIBHAR_01417 [Vibrio harveyi ATCC BAA-1116] gi|269834264|gb|EEZ88354.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi 1DA3] Length = 208 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 73/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + +++ +E P + +D R Sbjct: 153 AQEILT----------------IKQKLNNLL-----------AEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + G++D V Sbjct: 185 DNFMSADQAVEYGIVDAV 202 >gi|253570517|ref|ZP_04847925.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839466|gb|EES67549.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 353 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 85/244 (34%), Gaps = 42/244 (17%) Query: 39 ARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ARI ++G I E E +IE++ R + + ++SPGG + I I+K Sbjct: 12 ARIELKGTISKWRETEAEFTSKIEQLIR-SGIKDVHIYINSPGGECFEANEIVNVIKKFP 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + E + ASA I+ G+ + Sbjct: 71 GK--ITGEGGALVASAATYIAINCTSFSMPAN------GLFMIH---------------Q 107 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 V A+++M+ + + + F+ ++ + I G W Sbjct: 108 VSGGACGRVADI-----ESALEVMRKLNEHYLNAFLSKCTDKKKIR----DAWEKGDYWM 158 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + EAK+ G + V G+ +V +++ + G I N K+ DL L+ Sbjct: 159 SAQEAKENGFVTEVTGKAKVDKAMAQMITNCGYTGEIEITDSINNEKSKNDMDLTMLTTR 218 Query: 270 SLLE 273 ++ Sbjct: 219 FGMD 222 >gi|153810555|ref|ZP_01963223.1| hypothetical protein RUMOBE_00936 [Ruminococcus obeum ATCC 29174] gi|149833734|gb|EDM88815.1| hypothetical protein RUMOBE_00936 [Ruminococcus obeum ATCC 29174] Length = 223 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 53/208 (25%) Query: 41 IAIRGQIEDSQE----------------LIERIERISRDDSATALIVSLSSPGGSAYAGE 84 I I+G I + + + + + + D+ V ++S GGS AG+ Sbjct: 4 INIKGDIISNDDKWIYDWFEMDATCPRDVTDILNSAAVDEEIE---VLVNSGGGSVMAGQ 60 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ A +K +K V+ ++ MA SA +I+ A + +++ V Sbjct: 61 EIYSA---LKQKKNVVIKIQSMAGSAAGVIAMAG-KCQMSPVAMI-------MIHNVSMS 109 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 S N + ++ M + ++Y R D+ Sbjct: 110 GA----------SGDYHDMQK-----NAEILKQMNSALAAAYTE-----KSGR--SLDEI 147 Query: 205 LVLSDGRIW-TGAEAKKVGLIDVVGGQE 231 L L D W T + G +D + ++ Sbjct: 148 LKLMDRETWLTANQCLDYGFVDEIMSEQ 175 >gi|258564300|ref|XP_002582895.1| clp protease [Uncinocarpus reesii 1704] gi|237908402|gb|EEP82803.1| clp protease [Uncinocarpus reesii 1704] Length = 222 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 77/198 (38%), Gaps = 35/198 (17%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++++S ++ ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 47 IICLNGEVDESVSASIVAQLLFLEADNPEKQISLYINSPGGSVTAGLAIYDTMTYIQS-- 104 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C S SI + Sbjct: 105 PVSTICIGQAASMGSLLLCGGEPGKRFCLPHS---SI---MIHQ---------------- 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + I D+ L + + G Sbjct: 143 PSGGYFGQATDI-AIHAKEILRVRKQLNEIYKRHLTK-----EISLDEIEKLMERDYFMG 196 Query: 216 A-EAKKVGLIDVVGGQEE 232 A EA +G++D + + Sbjct: 197 ASEALGMGIVDGIMDRRT 214 >gi|255023331|ref|ZP_05295317.1| exfoliative toxin [Listeria monocytogenes FSL J1-208] Length = 138 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 14/79 (17%) Query: 32 EDNSPHVARIAIRGQIEDSQE--------------LIERIERISRDDSATALIVSLSSPG 77 E +A +++ G I+D+ + ++++E++ DD +++ ++SPG Sbjct: 57 EGGDDTIAVLSVDGTIQDTGDSGSLLGGGGYDHSFFMQQLEQVRNDDYIQGVLLYVNSPG 116 Query: 78 GSAYAGEAIFRAIQKVKNR 96 G I I +++ Sbjct: 117 GGVMESAQIRDKILQIQKE 135 >gi|289422712|ref|ZP_06424552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptostreptococcus anaerobius 653-L] gi|289156891|gb|EFD05516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptostreptococcus anaerobius 653-L] Length = 194 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 33/177 (18%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + DD + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 VVAQMLFLEADDPDKDIHLYINSPGGSVTAGMAIYDTMQYIKAD--VSTICVGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L++ + A S V + + + I+ K S Sbjct: 102 FLLAAGAKGKRYALPNSTV------MIHQPLGGTRGQA-TDIEIHT----KYLLSI---- 146 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + ++ + V + T EA+ GLID V Sbjct: 147 ----KEKLNKILAERTGQDLETVKANTERDN----------FMTADEARDFGLIDEV 189 >gi|291615232|ref|YP_003525389.1| hypothetical protein Slit_2777 [Sideroxydans lithotrophicus ES-1] gi|291585344|gb|ADE13002.1| protein of unknown function DUF107 [Sideroxydans lithotrophicus ES-1] Length = 463 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 23/239 (9%) Query: 18 VTLTVVYFSWSSHVEDNSPHVARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSS 75 + ++ +W+ + P V + + G I + ++ + + D SA +++ + + Sbjct: 7 LLSGLILATWAGCAMASGPVVVVLDVDGAISPGTADYVVRGMRSAA-DQSAQLIVLKMDT 65 Query: 76 PGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVA-AETSLVGS 131 PGG + I + I + + PV V AASAG I ++ I A A + +G+ Sbjct: 66 PGGLDTSMRQIIKQI--IASPIPVAAFVAPNGARAASAGTYI-LYASHIAAMAPATNLGA 122 Query: 132 -----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 IG+ +P + + + + A + + + + D Sbjct: 123 ATPVMIGLGGVGTGDQPQKEDKD-NTQEKDAGANPAPAKTAAPLTALEHKQVNDA----- 176 Query: 187 HWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVV-GGQEEVWQSLYALGVD 243 ++R +++ R + T AEA K+ +IDV+ ++ + L V+ Sbjct: 177 SAYIRSLAQMRGRNVQWAEQAVRQAVSLTAAEALKLKVIDVIAADVPDLLRQLDGRKVN 235 >gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|67460520|sp|Q7V9L6|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 216 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 78/189 (41%), Gaps = 37/189 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 + QI D+ L+ ++ + +D + + ++SPGGS AG AI+ +Q+V ++T Sbjct: 57 DVNDQIADA--LVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPD--IVT 112 Query: 102 EVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 + +AAS +L++ S +A S + + + + V I+ Sbjct: 113 MCYGLAASMGAFLLAGGSKGKRLALPNSR------IMIHQPLGGAQGQA-VEIEI----- 160 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 K + +++ ++ L++E +K +D + + EA Sbjct: 161 -----------QAKEILFLKETLN-------NLLAEHTGQSLEKISEDTDRDHFLSPQEA 202 Query: 219 KKVGLIDVV 227 + GLID V Sbjct: 203 VEYGLIDKV 211 >gi|332140445|ref|YP_004426183.1| Protease subunit of ATP-dependent Clp protease [Alteromonas macleodii str. 'Deep ecotype'] gi|327550467|gb|AEA97185.1| Protease subunit of ATP-dependent Clp protease [Alteromonas macleodii str. 'Deep ecotype'] Length = 153 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 33/170 (19%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AGYLISCAS 118 + ++ + + ++SPGGS AG AI+ ++ +K V T AAS +L+S + Sbjct: 4 LEAENPEKDIFLYINSPGGSVTAGMAIYDTMRFIKPD--VSTVCMGQAASMGAFLLSAGA 61 Query: 119 N-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 S V + + F + S + + K S + Sbjct: 62 KGKRYCLPNSRV------MIHQPLGGFQGQA--SDFEIHA---KEILSI--------KEK 102 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + ++ V+ R+ D + EAK+ GL+D V Sbjct: 103 LNRLLADHTGQDYEKVA--RDTDRDN--------FLSATEAKEYGLVDQV 142 >gi|310659088|ref|YP_003936809.1| membrane bound hydrolase [Clostridium sticklandii DSM 519] gi|308825866|emb|CBH21904.1| putative membrane bound hydrolase [Clostridium sticklandii] Length = 427 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATA 68 + ++L + + S S DN V I I G++ + E IE + +A Sbjct: 2 KRILLIFALMLSIIPSLSFGASDN---VYVIEISGEVNPGMLNYVRENIEDA-NNKNADL 57 Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 ++ + + GG + E I + I +K++ + V+ A SAG L+S ++N + A S Sbjct: 58 ILFEVDTLGGRIDSAEKISQEI--LKSKVKTASYVNTKAESAGVLLSISANSLYMAPAST 115 Query: 129 VGS 131 +GS Sbjct: 116 IGS 118 >gi|295396804|ref|ZP_06806937.1| ATP-dependent Clp protease proteolytic subunit [Aerococcus viridans ATCC 11563] gi|294974956|gb|EFG50650.1| ATP-dependent Clp protease proteolytic subunit [Aerococcus viridans ATCC 11563] Length = 198 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 76/201 (37%), Gaps = 35/201 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+ D + +I ++ + D + + ++SPGGS +G AI+ +Q V Sbjct: 29 IIMLSGEFNDDLANSIIAQLLFLDAQDPDKDIYLYINSPGGSITSGMAIYDTMQFVHAD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V MAAS G I+ A A + I + + ++ ++ + + Sbjct: 88 -VQTIVMGMAASMGSFIAAAGTKGKRFALPNAE---ILIHQPLGGAQGQATEIEIAARHI 143 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K +SE+ + V++++ D T Sbjct: 144 LKTKEK-MNRLYSEMTGQPVEVIERDTDRDNWL-------------------------TA 177 Query: 216 AEAKKVGLIDVVGGQEEVWQS 236 EA + GL+D + + + + Sbjct: 178 EEALEYGLLDQIMTKNDELEK 198 >gi|159043937|ref|YP_001532731.1| ATP-dependent Clp protease proteolytic subunit [Dinoroseobacter shibae DFL 12] gi|189082456|sp|A8LJA8|CLPP_DINSH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|157911697|gb|ABV93130.1| endopeptidase Clp [Dinoroseobacter shibae DFL 12] Length = 208 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G + D SQ ++ ++ + ++ + + + ++SPGG +G +I+ +Q +K + Sbjct: 37 IVFVNGPVHDGMSQLVVAQLLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPK- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A G+ F P + + + S Sbjct: 96 -VSTLVVGQAASMGSLLLTAGEK------------GMRFSLPNSRIMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGA 216 + + + ++ + Q ++D ++ Y + P K L Sbjct: 135 GGYQGQATDI-MIHAQETQKLKDRLNQIY-------VKHTGQPLKKVVDALERDNFMDAE 186 Query: 217 EAKKVGLIDVV 227 +AK+ GLID + Sbjct: 187 QAKEWGLIDEI 197 >gi|298491692|ref|YP_003721869.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc azollae' 0708] gi|298233610|gb|ADI64746.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc azollae' 0708] Length = 232 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 82/194 (42%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ + +DS + + ++SPGGS YAG AI+ IQ+++ Sbjct: 54 RIIFLGTPIDDNVANSIVAQLLFLDAEDSGKDIQLYINSPGGSVYAGMAIYDTIQQIRPD 113 Query: 97 KPVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L++ + ++ S + + + + + I+ Sbjct: 114 --VVTICFGLAASMGAFLLTAGTAGKRMSLPDSR------IMIHQPLGGAQGQA-IDIEI 164 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + + ++ ++ L+++ P D+ ++ + Sbjct: 165 ----------------QAREILYIKGNLNQ-------LMAKHTGQPLDRIEADTERDFFM 201 Query: 214 TGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 202 SAEEAKNYGLIDQV 215 >gi|229086348|ref|ZP_04218525.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-44] gi|228696960|gb|EEL49768.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-44] Length = 249 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 45/200 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHVIPQIVAIEQNPKIEGLLLLLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ +++ AET+ + +P + + +GV Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHPVRLTGLV--IGV------------------P 161 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKK 220 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 162 QTFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGIDAVK 214 Query: 221 VGLIDVVGGQEEVWQSLYAL 240 GLID VGG + + L L Sbjct: 215 YGLIDDVGGIGDAIRKLNEL 234 >gi|261205022|ref|XP_002627248.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces dermatitidis SLH14081] gi|239592307|gb|EEQ74888.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces dermatitidis SLH14081] gi|239611539|gb|EEQ88526.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces dermatitidis ER-3] Length = 248 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG A++ + + Sbjct: 62 IVCLNGEVDETLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA-- 119 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 120 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSV------MVHQ---------------- 157 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y + + D+ + + G Sbjct: 158 PSGGYFGQATDI-AIHAKEILRVRRQLNEIYKLHLTK-----EMSLDEIEKWMERDYFMG 211 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 212 AREALEMGIVDEI 224 >gi|228992486|ref|ZP_04152413.1| Translocation-enhancing protein tepA [Bacillus pseudomycoides DSM 12442] gi|229002772|ref|ZP_04160674.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock3-17] gi|229008526|ref|ZP_04165954.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock1-4] gi|228752750|gb|EEM02350.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock1-4] gi|228758487|gb|EEM07632.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock3-17] gi|228767120|gb|EEM15756.1| Translocation-enhancing protein tepA [Bacillus pseudomycoides DSM 12442] Length = 249 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 45/200 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHVIPQIVAIEQNPKIEGLLLLLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ +++ AET+ + +P + + +GV Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHPVRLTGLV--IGV------------------P 161 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKK 220 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 162 QTFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGIDAVK 214 Query: 221 VGLIDVVGGQEEVWQSLYAL 240 GLID VGG + + L L Sbjct: 215 YGLIDDVGGIGDAIRKLNEL 234 >gi|157369338|ref|YP_001477327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia proteamaculans 568] gi|157321102|gb|ABV40199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia proteamaculans 568] Length = 207 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + + + + ++SPGG AG +I+ ++ +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGSFLLTAGAKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ +E ++ ++ R Sbjct: 154 REIL----------------KVKARMNELM-----------AEHTGQTLEQIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 T EA + GL+D + Sbjct: 187 FMTAEEAVEYGLVDGI 202 >gi|39977745|ref|XP_370260.1| hypothetical protein MGG_06757 [Magnaporthe oryzae 70-15] gi|145013724|gb|EDJ98365.1| hypothetical protein MGG_06757 [Magnaporthe oryzae 70-15] Length = 274 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 33/226 (14%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I+D + ++ + +D + + ++SPGG +G AI+ + + + Sbjct: 74 IVCLNGPIDDWTQASVTAQLLWLEQDSPHKPITLYINSPGGQVSSGLAIYDTMNYISS-- 131 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T MAAS G L+ A+ A S + + +P G + + Sbjct: 132 PVHTVCVGMAASMGAILLLGGAAGQRYALPHS------QIMVH---QPLGSTQGQASDII 182 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 + K + ++ ++ + + + + + + T Sbjct: 183 --------------IYAKQITRIRSQINDIMRRHLNTAAGRERFAAQEVDEMMERDKYLT 228 Query: 215 GAEAKKVGLIDVVGGQE-EVWQSLY--ALGVDQSIRKIKDWNPPKN 257 EA ++G++D + + S A G + + + KN Sbjct: 229 ADEAVELGIVDKILTSRSDAVASALNDATGGRSAAAPAEAQDEKKN 274 >gi|300856723|ref|YP_003781707.1| ATP-dependent Clp protease proteolytic subunit [Clostridium ljungdahlii DSM 13528] gi|300436838|gb|ADK16605.1| ATP-dependent Clp protease proteolytic subunit [Clostridium ljungdahlii DSM 13528] Length = 194 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 43/182 (23%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS +G AI+ +Q +K+ V T M AS Sbjct: 44 VVAQLLFLEAEDPDKDIYLYINSPGGSITSGMAIYDTMQYIKSD--VSTICIGMGASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + A + + + + +G+ K Sbjct: 102 FLLTAGAKGKRFALPNAE------IMIHQPLGGFQGQATDIGIHA--------KRILDIK 147 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLID 225 ++N ++SE P +K ++ R T EAK+ GLID Sbjct: 148 KKLN-------------------TIISERTGQPLEKVEKDTE-RDNFMTAEEAKEYGLID 187 Query: 226 VV 227 V Sbjct: 188 EV 189 >gi|225378146|ref|ZP_03755367.1| hypothetical protein ROSEINA2194_03806 [Roseburia inulinivorans DSM 16841] gi|225209952|gb|EEG92306.1| hypothetical protein ROSEINA2194_03806 [Roseburia inulinivorans DSM 16841] Length = 231 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 85/232 (36%), Gaps = 55/232 (23%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPG 77 +E ++ + I G+IE + ++ ++ + + + L++ L++ G Sbjct: 22 ELEHGEDRISMLTIIGEIEGHECLPAATKTTKYEHVLPKLAEVEENKNVDGLLLLLNTVG 81 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G +G AI + + KP ++ V + S G ++ +++ + G + Sbjct: 82 GDVESGLAIAEMVASI--DKPTVSLVLGGSHSIGVPLAVSTDYSFIVPS------GTMVI 133 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 +P + G + + P + MQD + ++ V + Sbjct: 134 HP-----VRMNG---TVIGAQPTYDYF-----------KQMQDRI-------LKFVVQHS 167 Query: 198 NIPYDKTLVLSD---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 ++ L G I G +A + GLID +GG E + L+ L Sbjct: 168 KAEQNRLEELMMNTGILTKDLGTILVGGQAVEEGLIDSIGGIHEAFAKLHQL 219 >gi|260222837|emb|CBA32804.1| ATP-dependent Clp protease proteolytic subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 220 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 77/192 (40%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + ++SPGGS AG AI+ + +K Sbjct: 55 VIFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVSAGMAIYDTMNFIKPD- 113 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS +L++ + G F P K + + Sbjct: 114 -VSTLCTGMAASMGAFLLAAGAK-------------GKRFSLPNSKVMIHQ--------- 150 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 P+ +E+ A ++++ + ++++E P +K ++ + + Sbjct: 151 --PLGGTQGQATEIEIHAREILK-----TREQLNKILAERTGQPLEKIERDTERDYYLSA 203 Query: 216 AEAKKVGLIDVV 227 EAK+ GL+D V Sbjct: 204 DEAKEYGLVDQV 215 >gi|23099415|ref|NP_692881.1| hypothetical protein OB1960 [Oceanobacillus iheyensis HTE831] gi|22777644|dbj|BAC13916.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 446 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 6/138 (4%) Query: 4 VLKKIKTRYVMLSLVTLTVVYFSWSSHVE---DNSPHVARIAIRGQIEDS-QELIERIER 59 + K+++ + +V L + F+ + VE V I I ++E + ++R Sbjct: 2 IGKRLRYAVYITFIVILFCIPFASGNSVEAEQGEGETVYIIPIENEVERGLEAFLKRATE 61 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASN 119 + ++ A +I + +PGG + I IQ + P + + A SAG I+ S+ Sbjct: 62 EAMENGADHIIFEIDTPGGRVDSAGKIGSLIQSL--VVPSTSYIVNEALSAGSYIALFSD 119 Query: 120 IIVAAETSLVGSIGVLFQ 137 I + +G+ GV+ Q Sbjct: 120 NIYFNPHATMGASGVINQ 137 >gi|87302965|ref|ZP_01085769.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 5701] gi|87282461|gb|EAQ74420.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 5701] Length = 200 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 38/183 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ IQ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A + + + + + I+ Sbjct: 102 MGAFLLAAGTKGKRLALPHAR------IMIHQPLGGTSQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 +A +++ +D+++ S +K +D + + AEAK GLI Sbjct: 143 -----EAREILRIKDMLNQSLADMC-------GQSLEKVTKDTDRDYFLSAAEAKDYGLI 190 Query: 225 DVV 227 D V Sbjct: 191 DRV 193 >gi|241888864|ref|ZP_04776170.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella haemolysans ATCC 10379] gi|241864540|gb|EER68916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella haemolysans ATCC 10379] Length = 215 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 39/187 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ + DS + ++SPGGS AG AI+ +Q +K V+T MAAS Sbjct: 41 ANSITSQLLFLEAQDSEKDIYFYINSPGGSVTAGFAIYDTMQHIKCD--VVTICMGMAAS 98 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEP 164 +L++ + A + V + + ++ ++ + + + Sbjct: 99 MGAFLLAAGTIGKRYALPNAEV------MIHQPLGGAQGQATEIEIAARHILRT------ 146 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + + ++ ++ + ++ L T EA + GL+ Sbjct: 147 ----------REKLNKILADRTGQTIKTIER----DTERDNYL------TAEEACEYGLV 186 Query: 225 DVVGGQE 231 D V E Sbjct: 187 DKVMYPE 193 >gi|319651604|ref|ZP_08005731.1| YqeZ protein [Bacillus sp. 2_A_57_CT2] gi|317396671|gb|EFV77382.1| YqeZ protein [Bacillus sp. 2_A_57_CT2] Length = 362 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 34 NSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 ++ V + I +E + R + + +++A+A+I +++PGG+ A I R + Sbjct: 28 DNEKVLIVPIEETVEKGLYAFLNRAVQTAEEENASAIIFEINTPGGAVDAAGQIGRLL-- 85 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKP 143 I+ V++ A SAG I+ ++ I S +GS ++ Q Sbjct: 86 TSTNIKTISFVNKQALSAGAYIALNTDEIYMVPGSTMGSAAIIDQQGNTAG 136 >gi|311747477|ref|ZP_07721262.1| serine protease, ClpP class [Algoriphagus sp. PR1] gi|311302671|gb|EAZ79206.2| serine protease, ClpP class [Algoriphagus sp. PR1] Length = 449 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Query: 56 RIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLIS 115 +E+ +SA +++ + + GG+ + I + +++ P+ +++ AASAG LIS Sbjct: 49 ALEKAKE-ESADLILIEMDTYGGAVNDADDIRTML--LESEIPIQVFINKDAASAGALIS 105 Query: 116 CASNIIVAAETSLVG 130 A + I A S +G Sbjct: 106 IACDKIFMAPGSSIG 120 >gi|6723197|dbj|BAA89607.1| capsid protein [Bacteriophage WO] Length = 118 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q V Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVGRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 Query: 236 S 236 Sbjct: 62 K 62 >gi|329767857|ref|ZP_08259372.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans M341] gi|328838776|gb|EGF88373.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans M341] Length = 215 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 37/186 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ + DS + ++SPGGS AG AI+ +Q +K V+T MAAS Sbjct: 41 ANSITSQLLFLEAQDSEKDIYFYINSPGGSVTAGFAIYDTMQHIKCD--VVTICMGMAAS 98 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 +L++ G+IG + P + + + P Sbjct: 99 MGAFLLAA-------------GTIGKRYALPNAEVMIHQ------------------PLG 127 Query: 169 EVNPK--AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLID 225 + +++ + + +++++ ++ + T EA + GL+D Sbjct: 128 GAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLTAEEACEYGLVD 187 Query: 226 VVGGQE 231 V E Sbjct: 188 KVMYPE 193 >gi|153955960|ref|YP_001396725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium kluyveri DSM 555] gi|219856302|ref|YP_002473424.1| hypothetical protein CKR_2959 [Clostridium kluyveri NBRC 12016] gi|189082452|sp|A5N2K8|CLPP_CLOK5 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|254763788|sp|B9E685|CLPP_CLOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|146348818|gb|EDK35354.1| ClpP [Clostridium kluyveri DSM 555] gi|219570026|dbj|BAH08010.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 194 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 39/180 (21%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + ++ + ++SPGGS AG AI+ +Q +K+ V T MAAS Sbjct: 44 IVAQLLFLEAENPDKDIYFYINSPGGSITAGMAIYDTMQYIKSD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ A S + + + +G+ + Sbjct: 102 FLLAAGEKGKRFALPNSE------IMIHQPLGGFQGQATDIGIHADRILR---------- 145 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + + ++ + V + ++ T EAK+ GLID V Sbjct: 146 ------IKKKLNAIISERTGQSIEKVEK----DTERDN------FMTAEEAKEYGLIDEV 189 >gi|150396095|ref|YP_001326562.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium medicae WSM419] gi|150027610|gb|ABR59727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium medicae WSM419] Length = 208 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 37/204 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 37 IIFLTGPVEDHMATLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ A ++ A S + + Sbjct: 96 -VSTLCIGQAASMGSLLLAAGHKDMRFATPNSR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + Y++ D + + Sbjct: 133 PSGGFQGQASDI-ERHARDILKMKRRLNEVY-------VKHCGRTYEEVEQTLDRDHFMS 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLY 238 EA GLID V + + + Sbjct: 185 SDEALDWGLIDKVITSRDAVEGME 208 >gi|251796237|ref|YP_003010968.1| hypothetical protein Pjdr2_2226 [Paenibacillus sp. JDR-2] gi|247543863|gb|ACT00882.1| protein of unknown function DUF107 [Paenibacillus sp. JDR-2] Length = 458 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 76/217 (35%), Gaps = 27/217 (12%) Query: 26 SWSSHVEDNSPHVARIAIRGQIEDS-QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + P V + ++ +E + +ER + + + A +I+ +++ GG + E Sbjct: 36 AQGAEGSGLGPAVYVVPVKQTVESGLKSFLERAYKEAAEAKAERVILVINTFGGEVTSAE 95 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I I+ K+ P V A SAG I+ + IV S IG Sbjct: 96 EIGELIR--KSSVPTTAYVEGKAVSAGTYIALNAQNIVMEPGST---IGAAAVVNGSGDL 150 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 +D V VK+ AE + NP M V +P Sbjct: 151 IDNPKVVSFWVKTMREAAELN---GRNPDIAAAM--------------VDTGATLPLPDL 193 Query: 205 LVLSD-GRI--WTGAEAKKVGLID-VVGGQEEVWQSL 237 + G+I T EA KVG + E+ + L Sbjct: 194 KQVKQSGQILTLTADEALKVGYAEYKAESVEDAIKWL 230 >gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter uraniireducens Rf4] gi|189082459|sp|A5GFA0|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter uraniireducens Rf4] Length = 199 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I+D S +I ++ + +D + + ++SPGG AG AI+ ++ +K Sbjct: 28 IVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKA-- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T AAS G + SL S I + + + + + + Sbjct: 86 PVSTICVGQAASMGAFLLSGGEK--GKRFSLTNSRIMIHQPLGGFQGQATDIHIHAQEIL 143 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + + +++ +E P +K ++ + +G Sbjct: 144 R----------------MKKKLNELM-----------AEHTGQPVEKLEADTERDYFMSG 176 Query: 216 AEAKKVGLIDVV 227 +AK G+ID + Sbjct: 177 EDAKNYGIIDSI 188 >gi|125718530|ref|YP_001035663.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus sanguinis SK36] gi|166214716|sp|A3CPK8|CLPP_STRSV RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|125498447|gb|ABN45113.1| ATP-dependent Clp protease, proteolytic subunit, putative [Streptococcus sanguinis SK36] Length = 196 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V +AAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGVAASMGTIIASSGAK------------GKRFMLPNAEYLIHQ---------- 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM S + + ++ + + + + ++++E+ ++ ++ W + Sbjct: 123 -PMGGAGSGTQQT---DMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQ 178 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 179 ETLEYGFIDEI 189 >gi|206896036|ref|YP_002246921.1| periplasmic serine protease [Coprothermobacter proteolyticus DSM 5265] gi|206738653|gb|ACI17731.1| periplasmic serine protease [Coprothermobacter proteolyticus DSM 5265] Length = 264 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 +EDS+ ++ I D + L +PGG A E I RA+ + VI + Sbjct: 51 TMEDSEAVLTAIRSTPPDTPID---LVLHTPGGLVLAAEQIARALYMHPAKTTVI--IPH 105 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ + +++G Sbjct: 106 YAMSGGTLIALAADQIIMDKHAVIG 130 >gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC 7120] gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena variabilis ATCC 29413] gi|21759070|sp|Q8YQX8|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC 7120] gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena variabilis ATCC 29413] Length = 232 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D+ ++ ++ + +DS + + ++SPGGS YAG AI+ IQ+++ Sbjct: 54 RIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPD 113 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V+T +AAS G + A G P + + + Sbjct: 114 --VVTICFGLAASMGAFLLTAGTK------------GKRMSLPDSRIMIHQ--------- 150 Query: 157 SSPMKAEPSPFSEVNPKAVQM-MQD-VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 P +A+ + +Q + +L++ P ++ +D + Sbjct: 151 ---------PLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFM 201 Query: 214 TGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 202 SAEEAKNYGLIDQV 215 >gi|152968201|ref|YP_001363985.1| ATP-dependent Clp protease proteolytic subunit [Kineococcus radiotolerans SRS30216] gi|151362718|gb|ABS05721.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216] Length = 240 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 36/193 (18%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + GQ D + + ++ +S DD + + + ++SPGGS AG AI+ ++ + N Sbjct: 58 RIVVLGQEVDDAVANRICAQLLLLSADDPRSDIALYVNSPGGSISAGLAIYDTMRLIPND 117 Query: 97 KPVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T V MAAS G + CA + A + V+ P G+ Sbjct: 118 --VSTLVMGMAASMGQFLLCAGTAGKRYALPHAR-----VMMHQPS-------GGI---- 159 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 A+ + +E MQ ++ V V + + R +T Sbjct: 160 ---GGTAADIAIQAENLAHTKATMQRLIAEHTGQDVETVE----LDSQRD------RWFT 206 Query: 215 GAEAKKVGLIDVV 227 EA G++D V Sbjct: 207 AEEALAYGVVDHV 219 >gi|269976479|ref|ZP_06183464.1| Clp protease [Mobiluncus mulieris 28-1] gi|307701829|ref|ZP_07638843.1| endopeptidase Clp [Mobiluncus mulieris FB024-16] gi|269935280|gb|EEZ91829.1| Clp protease [Mobiluncus mulieris 28-1] gi|307613087|gb|EFN92342.1| endopeptidase Clp [Mobiluncus mulieris FB024-16] Length = 197 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 36/186 (19%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 + + + D + + + ++SPGGS AG AI+ +Q +K V+T MAAS G Sbjct: 43 AQMLLLAAEDPDSD-IYLYINSPGGSVTAGMAIYDTMQYIKPD--VVTVTMGMAASMGQF 99 Query: 114 I--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + + A A + + + + Sbjct: 100 LLTAGAKGKRFATPHAR------ILMHQPLGGVQG------------------------T 129 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 V++ D++ + + ++ +E ++ +D W T EA + G ID V Sbjct: 130 ASEVRINADLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDAVVEN 189 Query: 231 EEVWQS 236 E + Sbjct: 190 AEAVKK 195 >gi|227874919|ref|ZP_03993071.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243] gi|227844496|gb|EEJ54653.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243] Length = 206 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 36/186 (19%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 + + + D + + + ++SPGGS AG AI+ +Q +K V+T MAAS G Sbjct: 52 AQMLLLAAEDPDSD-IYLYINSPGGSVTAGMAIYDTMQYIKPD--VVTVTMGMAASMGQF 108 Query: 114 I--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + + A A + + + + Sbjct: 109 LLTAGAKGKRFATPHAR------ILMHQPLGGVQG------------------------T 138 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 V++ D++ + + ++ +E ++ +D W T EA + G ID V Sbjct: 139 ASEVRINADLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDAVVEN 198 Query: 231 EEVWQS 236 E + Sbjct: 199 AEAVKK 204 >gi|167748739|ref|ZP_02420866.1| hypothetical protein ANACAC_03513 [Anaerostipes caccae DSM 14662] gi|167651709|gb|EDR95838.1| hypothetical protein ANACAC_03513 [Anaerostipes caccae DSM 14662] Length = 202 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 74/187 (39%), Gaps = 30/187 (16%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + D + + ++SPGGS AG AI+ ++ ++ V T +AAS Sbjct: 44 IVAQMLFLEAQDPGRDIQLYINSPGGSVTAGFAIYDTMKYIQCD--VATICVGLAASFGA 101 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +L++ + G P + + + + ++ P Sbjct: 102 FLLAGGTQ-------------GKRMALPNAEIMIHQPAIHGNGIQ-GPASDI-------- 139 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 ++M D + + R+++E+ ++ +D + + EA K GLID V + Sbjct: 140 ----KIMSDYMQKNKQRLNRILAENTGRSIEEIERDTDRDHFMSAEEALKYGLIDSVISK 195 Query: 231 EEVWQSL 237 + Q L Sbjct: 196 RQKKQHL 202 >gi|166368459|ref|YP_001660732.1| ATP-dependent Clp protease proteolytic subunit [Microcystis aeruginosa NIES-843] gi|159028168|emb|CAO89775.1| clpP [Microcystis aeruginosa PCC 7806] gi|166090832|dbj|BAG05540.1| ATP-dependent Clp protease proteolytic subunit [Microcystis aeruginosa NIES-843] Length = 199 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 72/180 (40%), Gaps = 32/180 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +D + + ++SPGGS AG AI+ +Q +K V+T +AAS Sbjct: 44 ANALVAQMLYLDSEDPTKPIYLYINSPGGSVTAGMAIYDTMQYIKAE--VVTICVGLAAS 101 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 +L++ GS G P ++ + + +A + Sbjct: 102 MGAFLLAS-------------GSPGKRLALP-----HARIMIHQPMGGTGRRQA-----T 138 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +++ +A +++ +++ ++ +D + + EA GLID V Sbjct: 139 DIDIEAKEIL-----RIRQQLNEIMANRTGQTIERIEKDTDRDYFLSAEEAVAYGLIDKV 193 >gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella atypica ACS-134-V-Col7a] gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella atypica ACS-049-V-Sch6] gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella atypica ACS-049-V-Sch6] gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella atypica ACS-134-V-Col7a] Length = 197 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 75/202 (37%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q + K Sbjct: 28 IIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQYI---K 84 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + V A+ L++ + A + V + V+ ++ + Sbjct: 85 PDVSTICVGSAASMGAVLLTAGAKGKRFALPHARV------MIHQPLGGVQGQASEIEIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ + + +V+ R+ D Sbjct: 139 AREILR----------------MREELNGILAARSGQDIEVVA--RDTDRDN-------- 172 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GLID V ++ + Sbjct: 173 FMSAQDAVEYGLIDEVLTRDTL 194 >gi|262201986|ref|YP_003273194.1| endopeptidase Clp [Gordonia bronchialis DSM 43247] gi|262085333|gb|ACY21301.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247] Length = 207 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 42/196 (21%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + L +I ++ +D + + ++SPGGS AG AIF +Q Sbjct: 37 RIIFLGTQVDDDIANRLCAQILLLAAEDPHKDINLYINSPGGSVTAGMAIFDTMQLATCD 96 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVS 151 V T MAAS +L++ + A + + + + + + Sbjct: 97 --VATYAMGMAASMGQFLLAAGAKGKRHALPHAR------IMMHQPSAGIGGTAADIAIQ 148 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + ++ K +E + + ++ ++ D Sbjct: 149 AEQFAATK-KEMNRLNAEFSGQPLEKIEADADRDKW------------------------ 183 Query: 212 IWTGAEAKKVGLIDVV 227 +T EAK+ GL+D V Sbjct: 184 -FTAEEAKEYGLVDHV 198 >gi|6723219|dbj|BAA89618.1| capsid protein [Bacteriophage WO] Length = 118 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q V Y F++L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVGRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ D Sbjct: 62 NHKSRSVSMTTNELPD 77 >gi|34581620|ref|ZP_00143100.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica 246] gi|20137864|sp|Q92HM5|CLPP_RICCN RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|28263005|gb|EAA26509.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica 246] Length = 201 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 44 IVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 101 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 102 LLLCGGEK------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 140 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 141 QETLKIKRLLNELYSKHTEQELKHIEKSMERDN------FMSPEEAKKFGLVDNIMSSRD 194 Query: 233 VWQSLYA 239 L Sbjct: 195 AMALLAK 201 >gi|323351064|ref|ZP_08086721.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis VMC66] gi|322122788|gb|EFX94497.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis VMC66] gi|324993705|gb|EGC25624.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK405] gi|324994982|gb|EGC26895.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK678] gi|325687068|gb|EGD29091.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK72] gi|325696303|gb|EGD38194.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK160] gi|327462975|gb|EGF09296.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK1] gi|327470480|gb|EGF15936.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK330] gi|327474578|gb|EGF19983.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK408] gi|327490136|gb|EGF21924.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK1058] gi|328946905|gb|EGG41042.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK1087] gi|332359077|gb|EGJ36898.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK49] gi|332362296|gb|EGJ40096.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK1056] gi|332367219|gb|EGJ44954.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK1059] Length = 196 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V +AAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGVAASMGTIIASSGAK------------GKRFMLPNAEYLIHQ---------- 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM S + + ++ + + + + ++++E+ ++ ++ W + Sbjct: 123 -PMGGAGSGTQQT---DMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQ 178 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 179 ETLEYGFIDEI 189 >gi|296112317|ref|YP_003626255.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis RH4] gi|295920011|gb|ADG60362.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis RH4] Length = 217 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + D+ + + ++SPGG AG AI+ + + K Sbjct: 49 VIFLTGQVEDNMANLIVAQLLFLEADNPEKDIHLYINSPGGVVTAGMAIYDTMNFI---K 105 Query: 98 P-VITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P V T AAS G + A A S V + + + + Sbjct: 106 PHVSTICMGQAASMGSFLLSAGEKGKRYALANSRV------MIHQPLGGFRGQASDIEIH 159 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + +KA+ + RL++E P +K +D Sbjct: 160 AREII--ELKAKLN-------------------------RLLAEHTGQPIEKLERDTDRD 192 Query: 212 IW-TGAEAKKVGLIDVV 227 + + +A+ GL+DVV Sbjct: 193 HFMSAEQARDYGLVDVV 209 >gi|291557791|emb|CBL34908.1| ATP-dependent Clp protease proteolytic subunit ClpP [Eubacterium siraeum V10Sc8a] Length = 306 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 45/208 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ + I +D S L++ L++ GG AG AI I + KP ++ V S Sbjct: 65 EHIMPALVAIEQDMSIDGLLIILNTVGGDVEAGLAISELIAGMS--KPTVSIVVGGGHSI 122 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G ++ ++ ++ + +P + L LG+ Sbjct: 123 GVPLAVSARKSFIVPSA------TMTIHPVRMNGLL--LGI------------------- 155 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSES--------RNIPYDKTLVLSD-GRIWTGAEAKK 220 P+ + + + + + VS++ R + K ++ D G + G A Sbjct: 156 --PQTLSYFERMQERI----INFVSKNSRIKPERFRELMMKKDELVMDVGSVLDGETAVN 209 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRK 248 GLID +GG + Q LY+L Q K Sbjct: 210 EGLIDSLGGLSDAVQCLYSLIEQQKTDK 237 >gi|317470420|ref|ZP_07929809.1| Clp protease [Anaerostipes sp. 3_2_56FAA] gi|316902100|gb|EFV24025.1| Clp protease [Anaerostipes sp. 3_2_56FAA] Length = 202 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 74/187 (39%), Gaps = 30/187 (16%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + D + + ++SPGGS AG AI+ ++ ++ V T +AAS Sbjct: 44 IVAQMLFLEAQDPGRDIQLYINSPGGSVTAGFAIYDTMKYIQCD--VATICVGLAASFGA 101 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +L++ + G P + + + + ++ P Sbjct: 102 FLLAGGTQ-------------GKRMALPNAEIMIHQPAIHGNGIQ-GPASDI-------- 139 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 ++M D + + R+++E+ ++ +D + + EA K GLID V + Sbjct: 140 ----KIMSDYMQKNKQRLNRILAENTGRSIEEIERDTDRDHFMSAEEALKYGLIDSVISK 195 Query: 231 EEVWQSL 237 + Q L Sbjct: 196 RQKKQHL 202 >gi|294141357|ref|YP_003557335.1| hypothetical protein SVI_2586 [Shewanella violacea DSS12] gi|293327826|dbj|BAJ02557.1| membrane protein, putative [Shewanella violacea DSS12] Length = 476 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 37/224 (16%) Query: 12 YVMLSLVTLTVVYFSWSSHVE-DNSPHVARIAIRGQIEDS-QELIERIERISRDDSATAL 69 +++L + T + + SSH D+S + + I+G I + + + I+ ++ A + Sbjct: 13 FLLLFITTASFAISNTSSHTPRDSSAEIPVLTIKGAIGPAISDYLTTEMAIANENGAPLV 72 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAET 126 ++ + +PGG + I +AI + ++ P+ V AASAG I A +I A+ Sbjct: 73 VIIIDTPGGLVSSLRDINQAI--LNSQVPIACLVHPAGARAASAGTYILYACHIAAMAQA 130 Query: 127 SLVG-----SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 + +G SIG K P + + M+ Sbjct: 131 TTLGAATPVSIG------------------------GAPKGAPQDKDDNKTNSATAMEKK 166 Query: 182 VDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLI 224 + + ++R +++ R + L + + T EA + +I Sbjct: 167 ILNDSIAYIRSLAQLRGRNEEWAELAVKEAATLTAQEALEKNVI 210 >gi|302874445|ref|YP_003843078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium cellulovorans 743B] gi|307690948|ref|ZP_07633394.1| ATP-dependent Clp protease proteolytic subunit [Clostridium cellulovorans 743B] gi|302577302|gb|ADL51314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium cellulovorans 743B] Length = 194 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 41/186 (22%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH-EM 106 + ++ ++ + +D + + ++SPGGS AG AI+ + + KP + + M Sbjct: 39 ASASVVVAQLLFLESEDPDKDISLYINSPGGSITAGMAIYDTMNYI---KPDVATICIGM 95 Query: 107 AAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMK 161 AAS +L++ + A S + + K +G+ + + K Sbjct: 96 AASMGAFLLAAGAKGKRFALPNSE------IMIHQPLGGFKGQATDIGIHAERILLMK-K 148 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 S SE + +++++ + T +AK Sbjct: 149 KLNSILSERTGQPLEVIEKDTERDN-------------------------FMTADKAKDY 183 Query: 222 GLIDVV 227 GLID V Sbjct: 184 GLIDEV 189 >gi|221309558|ref|ZP_03591405.1| TepA [Bacillus subtilis subsp. subtilis str. 168] gi|221318805|ref|ZP_03600099.1| TepA [Bacillus subtilis subsp. subtilis str. JH642] gi|221323077|ref|ZP_03604371.1| TepA [Bacillus subtilis subsp. subtilis str. SMY] Length = 245 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 53/204 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ + + AET G + +P + + +GV Sbjct: 126 GVPIAVSCDYSYIAET------GTVTIHPVRLTGLV--IGV------------------P 159 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GA 216 + + MQ+ V V+ V+ NI +K L +++ G Sbjct: 160 QTFEYLDKMQERV-------VKFVTSHSNITEEKFKEL----MFSKGNLTRDIGTNVVGK 208 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 +A K GLID GG + L L Sbjct: 209 DAVKYGLIDHAGGVGQAINKLNEL 232 >gi|9634652|ref|NP_038326.1| ORF25 [Streptococcus phage 7201] gi|7248482|gb|AAF43518.1|AF145054_26 ORF25 [Streptococcus phage 7201] Length = 221 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 80/231 (34%), Gaps = 50/231 (21%) Query: 39 ARIAIRGQIEDSQELI------------ERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 +I I+G I + + ++ +D + ++++S GG +A I Sbjct: 2 GKIDIKGDIASDDLVAFYDFFGMKCTYPKMVQEAIENDKDEEITLNIASNGGDVFAASEI 61 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++ + K ++ V +AASA +IS A + + + T+ + + Sbjct: 62 YTMLK--ASGKRIVVNVQGLAASAASVISMAGDTVRISPTA------QIMIH-------- 105 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 K+S S E + + + + +Y + + L Sbjct: 106 ---------KASTGIRGNSDDLEHQSAVLSSIDESIALAYEM-------KTGLKQTELLD 149 Query: 207 LSDGRIWT-GAEAKKVGLIDVVG---GQEEVW--QSLYALGVDQSIRKIKD 251 L W A G D + +EEV +++ L +I K K+ Sbjct: 150 LMAKETWLNAKTAVDKGFADEIMFSDTEEEVMVTNAVHQLPNKSAITKFKN 200 >gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptospirillum ferrodiazotrophum] Length = 201 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 42/196 (21%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G I+D + +I ++ + +DS+ + + ++SPGG AG AI+ I+ +K Sbjct: 27 RIIILGTPIDDTVANLVIAQMLFLESEDSSKDINLYINSPGGIVTAGLAIYDTIKFIKPD 86 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V T AAS +L+S + A + + + + + + Sbjct: 87 --VSTICIGQAASMGAFLLSAGAKGKRYALPNAR------IMIHQPMGGFQGQATDIEIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + +KA+ + ++ V V++ + Y Sbjct: 139 AREIL--KLKADLN--------------RMMSEHCGQPVEKVAQDTDRDY---------- 172 Query: 212 IWTGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 173 FMSAKEAKDYGLIDSV 188 >gi|239917499|ref|YP_002957057.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus luteus NCTC 2665] gi|281414011|ref|ZP_06245753.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus luteus NCTC 2665] gi|239838706|gb|ACS30503.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus luteus NCTC 2665] Length = 205 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 35/185 (18%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ +S +D + + ++SPGGS AG AI+ +Q + N V+T +A Sbjct: 40 DNANAICSQLLLLSAEDPEKDIYLYINSPGGSVTAGMAIYDTMQYIPND--VVTVATGLA 97 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L++ + A + VL P S + Sbjct: 98 ASMGQFLLASGTKGKRYATPHAR-----VLMHQP-----------------SGGIGG--- 132 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-SDGRIWTGAEAKKVGLI 224 +++ ++ L +E + L + + +T EA + G I Sbjct: 133 -----TESDIRIQAQLILHMKQVMAELTAEQTGQSVETILEDNARDKWFTAQEALEYGFI 187 Query: 225 DVVGG 229 D + Sbjct: 188 DHIAD 192 >gi|224079413|ref|XP_002305856.1| predicted protein [Populus trichocarpa] gi|222848820|gb|EEE86367.1| predicted protein [Populus trichocarpa] Length = 338 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 87/241 (36%), Gaps = 47/241 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +I ++ + +D + + ++SPGGS AG I+ A++ K V T +AAS Sbjct: 120 ADFIISQLLFLDAEDPKKDIKLFINSPGGSVTAGLGIYDAMKLCKAD--VSTICLGLAAS 177 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP-F 167 +L+S GS G F P + + + +E S Sbjct: 178 MGAFLLSA-------------GSKGKRFCMPNGRVM-----IHQPLGTAGGKASEMSIRI 219 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLID 225 E++ + ++ P ++ V +D R EAK+ GL+D Sbjct: 220 REMS-YHKIKLNKILSRI-----------TGKPLEQVEVDTD-RDNFMNAWEAKEYGLVD 266 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G + + D +PP DL + S ++ +P + Sbjct: 267 EV--IDD--------GKPGLVAPLTDASPPPKTRVWDLWKIEGSKKAKNNLPSEHKMLQN 316 Query: 286 G 286 G Sbjct: 317 G 317 >gi|257870381|ref|ZP_05650034.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257804545|gb|EEV33367.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 238 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 40/204 (19%) Query: 30 HVEDNSPHVARIAIRGQI-----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + + H+ + + G I D + + ++ R + D +++ L+S GG + G Sbjct: 17 NESKDGKHI--LTLSGVIQKRYWSDDKYIDAKLIRDNLDGVTDDVVIRLNSNGGDVFQGV 74 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ ++ + + EV AASA I ++ ++ + + Sbjct: 75 EIYNYLKNHSSH--ITVEVMATAASAATFICAGADEVIMN----------VGTSFMIHEA 122 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 ++V + +A++ + D + S Y ++ D+ Sbjct: 123 --------ETVGWGNKTDI-----KKTLQALETIDDSILSIY-------ADKTGQSKDQI 162 Query: 205 LV-LSDGRIWTGAEAKKVGLIDVV 227 +++ R +T EA K G D V Sbjct: 163 TTWINEARWFTADEAVKFGFADSV 186 >gi|324991352|gb|EGC23285.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK353] gi|325690651|gb|EGD32652.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK115] gi|325694980|gb|EGD36884.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK150] Length = 196 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V +AAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGVAASMGTIIASSGAK------------GKRFMLPNAEYLIHQ---------- 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM S + + ++ + + + + ++++E+ ++ ++ W + Sbjct: 123 -PMGGAGSGTQQT---DMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQ 178 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 179 ETLEYGFIDEI 189 >gi|88809170|ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7805] Length = 200 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS + + ++SPGGS AG AI+ IQ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSGKPIYLYINSPGGSVTAGLAIYDTIQYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A S + + + + I+ Sbjct: 102 MGAFLLAAGTKGKRLALPHSR------IMIHQPLGGTAQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A +++ R ++E ++K +D + + EA GLID Sbjct: 143 -----EAREIL-----RMKEMLNRSMAEMSGQSFEKIEKDTDRDYFLSSQEAMDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|330469650|ref|YP_004407393.1| endopeptidase clp [Verrucosispora maris AB-18-032] gi|328812621|gb|AEB46793.1| endopeptidase clp [Verrucosispora maris AB-18-032] Length = 212 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ ++ +D + + ++SPGGS Y+G AI+ +Q + N V T MAAS Sbjct: 49 ANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYDTMQYIDND--VSTVAMGMAAS 106 Query: 110 AGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ CA A + + + P Sbjct: 107 MGQLLLCAGTKGKRYALPHAR------IMMHQ-------------------PSGGLGGTA 141 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 S++ +A QM+ + F V+ + SD R +T EA G ID Sbjct: 142 SDIAIQAEQMLY-----TKRMFQERVAHHTGQSQAQIEADSDRDRWFTAQEAMDYGFIDK 196 Query: 227 V 227 V Sbjct: 197 V 197 >gi|325276103|ref|ZP_08141914.1| peptidase S14 ClpP [Pseudomonas sp. TJI-51] gi|324098767|gb|EGB96802.1| peptidase S14 ClpP [Pseudomonas sp. TJI-51] Length = 291 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 37/193 (19%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ ++ + + I D + V ++SPGG + G AI+ +++ K + V +V Sbjct: 58 GEGVTAKRVSAALRSIGDKD----ITVKINSPGGDVFEGLAIYNLLREHKGK--VTVQVL 111 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AASA I+ A + I A G + + + ++ + Sbjct: 112 GLAASAASFIAMAGDEIQIARA------GFMMIH------------NAWTIAAGDRNDFT 153 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGL 223 V D +D++ + V + L D W G+ A + G Sbjct: 154 ---------EVADFLDQIDATLAD-IYSVRTGDEVSA--MRALMDVETWMGGSGAVEAGF 201 Query: 224 IDVVGGQEEVWQS 236 D + + + Sbjct: 202 ADGLLPSDAAQED 214 >gi|306818243|ref|ZP_07451973.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris ATCC 35239] gi|304648982|gb|EFM46277.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris ATCC 35239] Length = 206 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 36/186 (19%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 + + + D + + + ++SPGGS AG AI+ +Q +K V+T MAAS G Sbjct: 52 AQMLLLAAEDPDSD-IYLYINSPGGSVTAGMAIYDTMQYIKPD--VVTVTMGMAASMGQF 108 Query: 114 I--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 + + A A + + + + Sbjct: 109 LLTAGAKGKRFATPHAR------ILMHQPLGGVQG------------------------T 138 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQ 230 V++ D++ + + ++ +E ++ +D W T EA + G ID V Sbjct: 139 ASEVRINADLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDAVVEN 198 Query: 231 EEVWQS 236 E + Sbjct: 199 AEAVKK 204 >gi|153009536|ref|YP_001370751.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum anthropi ATCC 49188] gi|151561424|gb|ABS14922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum anthropi ATCC 49188] Length = 230 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 58 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 115 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 116 PVSTLCMGQAASMGSLLLTAGATGQRYALPNAR------IMVHQ---------------- 153 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + Y+ D + T Sbjct: 154 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYETIERTLDRDHFMT 205 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 206 AQEALEFGLIDKVVESRDV 224 >gi|153209414|ref|ZP_01947390.1| nfeD family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165919416|ref|ZP_02219482.1| nfeD family protein [Coxiella burnetii RSA 334] gi|212219206|ref|YP_002305993.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii CbuK_Q154] gi|120575351|gb|EAX31975.1| nfeD family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165916932|gb|EDR35536.1| nfeD family protein [Coxiella burnetii RSA 334] gi|212013468|gb|ACJ20848.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii CbuK_Q154] Length = 458 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 14/160 (8%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQI--EDSQELIERIER 59 + K+I R + ++T ++ + ++N+ +A I I+G I + +++ Sbjct: 2 YCRKRIFIRCFYILMLTFGLLGIASHIIAQNNTRRLAILIDIKGGIGPATADFFHRSLKQ 61 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISC 116 + A +I+ L +PGG A A I + I + + PVI V AASAG I Sbjct: 62 ATE-KKAQVIILQLDTPGGLATAMRDIIKDI--LASPIPVIGYVAPSGAHAASAGTYILY 118 Query: 117 ASNIIVAAETSLVG-----SIGVLFQYPYVKPFLDKLGVS 151 A++I A + +G +IG K K G Sbjct: 119 ATHIAAMAPGTNLGAATPIAIGTPGGSSPEKGNEKKEGAK 158 >gi|281356561|ref|ZP_06243052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Victivallis vadensis ATCC BAA-548] gi|281316688|gb|EFB00711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Victivallis vadensis ATCC BAA-548] Length = 201 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 75/194 (38%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q + Sbjct: 32 RIILLGTPIDDDVANLIVAQLLFLQAEDPKKDIDLYINSPGGSVTAGLAIYDTMQILSCD 91 Query: 97 KPVITEVHEMAAS-AGYLI-SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T AS L+ + A+ A S I + + + + + + Sbjct: 92 --VKTYCVGQCASMGAVLLCAGAAGKRFALPNSR---IMIHQPWGGAQGTAADMDIQV-- 144 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 K +Q ++ +++ ++S P K ++ + Sbjct: 145 ------------------KEIQRLKAMLN-------GILSSHSGQPIKKIEKDTERDFFM 179 Query: 215 G-AEAKKVGLIDVV 227 G +A K GL+D V Sbjct: 180 GAEDAVKYGLVDKV 193 >gi|302348710|ref|YP_003816348.1| Nodulation protein NfeD related protein [Acidilobus saccharovorans 345-15] gi|302329122|gb|ADL19317.1| Nodulation protein NfeD related protein [Acidilobus saccharovorans 345-15] Length = 436 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 41/165 (24%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK-PVITEV--HEMAASAGYLISCASNII 121 A A+++ +++PGG I I++ + PV T V MAASAG I+ A+N I Sbjct: 67 KAKAIVIVMNTPGGYLSDMLKIVSYIEQAQAAGIPVYTYVPPDGMAASAGSYIAMATNSI 126 Query: 122 VAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV 181 + + +G S+P+ +P Q+ Sbjct: 127 IMDNGTFIGP-------------------------STPIVVGGTPLE----------QNH 151 Query: 182 VDSSYHWFVRLVSE--SRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + + F+ ++ RN K +V+ D R +T EA + LI Sbjct: 152 TEDAMIAFMESLASKWGRNATAAKIMVVDD-RAFTAEEALRYHLI 195 >gi|254525962|ref|ZP_05138014.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Prochlorococcus marinus str. MIT 9202] gi|221537386|gb|EEE39839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Prochlorococcus marinus str. MIT 9202] Length = 214 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 48/199 (24%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I D S L+ ++ + +D + + ++SPGGS AG AI+ +Q++ Sbjct: 50 RIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMAIYDTMQQISPD 109 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A S + + Sbjct: 110 --VVTICFGVAASMGAFLLSGGAKGKRLALPNSR------IMIH---------------- 145 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSD 209 + Q ++ + + F++ L++E P +K ++ Sbjct: 146 -------------QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTE 192 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + + +EA + GLID V Sbjct: 193 RDYFLSPSEAVEYGLIDKV 211 >gi|16082107|ref|NP_394542.1| nodulation protein NfeD related protein [Thermoplasma acidophilum DSM 1728] gi|10640397|emb|CAC12211.1| nodulation protein NfeD related protein [Thermoplasma acidophilum] Length = 434 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDSATALIV 71 VM + L +V + S + +V I + +I+ S +I + + A+++ Sbjct: 9 VMAVFLLLLLVSIAADSQAQPQK-NVVVIYLDEEIDAGSAAMITSTMNSISNTTTAAVVI 67 Query: 72 SLSSPGGSAYAGEAIFRAIQKVKNRKPV-ITEV--HEMAASAGYLISCASNIIVAAETSL 128 +++PGG + +I ++R + IT V + MAASAG ++ A++ I A + Sbjct: 68 DMNTPGGELENMIQMVSSITSAESRGIITITYVPQNAMAASAGSYVAMATDYIFMANGTY 127 Query: 129 VG 130 +G Sbjct: 128 IG 129 >gi|15895898|ref|NP_349247.1| ATP-dependent Clp protease proteolytic subunit [Clostridium acetobutylicum ATCC 824] gi|18202304|sp|P58276|CLPP_CLOAB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|15025667|gb|AAK80587.1|AE007761_6 Protease subunits of ATP-dependent protease, ClpP [Clostridium acetobutylicum ATCC 824] gi|325510050|gb|ADZ21686.1| ATP-dependent Clp protease proteolytic subunit [Clostridium acetobutylicum EA 2018] Length = 193 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + ++ D+ ++ ++ + +D + + ++SPGGS +G AI+ +Q VK Sbjct: 29 VIFLGEEVNDTTASLVVAQLLFLESEDPDKDIYLYINSPGGSITSGMAIYDTMQYVKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S + + K +G+ Sbjct: 88 -VSTICIGMAASMGSFLLTAGAPGKRFALPNSE------IMIHQPLGGFKGQATDIGIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + ++ ++S Y SE P + +D Sbjct: 141 QRILE--------------------IKKKLNSIY-------SERTGKPIEVIEKDTDRDH 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 174 FLSAEEAKEYGLIDEV 189 >gi|254441469|ref|ZP_05054962.1| Clp protease [Octadecabacter antarcticus 307] gi|198251547|gb|EDY75862.1| Clp protease [Octadecabacter antarcticus 307] Length = 209 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I D SQ ++ ++ + ++ + + ++SPGG+ ++G +I+ +Q ++ + Sbjct: 37 IIFVNGPIHDGMSQLVVAQLLHLEAENPKKEISMYINSPGGAVHSGMSIYDTMQYIRPK- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T + MAAS G +I+ G+ F P + + + Sbjct: 96 -VSTLICGMAASMGSVIAVGGEK------------GMRFSLPNSEIMVHQ----PSGGSQ 138 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + ++ + F +L + + D W T Sbjct: 139 GKASDML------------ITARHIEQTRERFYKLYMKHTGQTHKSVEKALDRDTWMTPE 186 Query: 217 EAKKVGLIDVV 227 EAK+ G +D + Sbjct: 187 EAKEWGHLDEI 197 >gi|60416366|sp|Q8RC25|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp Length = 195 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + +I D+ +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T MAAS A +L++ + A S I + + ++ + + + + Sbjct: 88 -VVTLCVGMAASMAAFLLAAGAKGKRFALPNSE---IMIHQPWGGMQGQATDIKIHAERL 143 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K E SE + ++ ++ ++ Y T Sbjct: 144 LRLRDKLE-RILSENTGQPLEKIKADMERDY-------------------------FMTA 177 Query: 216 AEAKKVGLIDVV 227 EAK G+ID + Sbjct: 178 EEAKTYGIIDDI 189 >gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi NT] gi|166201817|sp|A0Q2L1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium novyi NT] Length = 195 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 41/185 (22%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 VVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIYDTMQYIKPD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEP-SP 166 +L++ + A S + + + +G+ + +K + S Sbjct: 102 FLLTAGAKGKRFALPNSE------IMIHQPLGGFQGQATDIGIHANRIL--KIKDKLNSI 153 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 SE + +++++ V+ F+ EAK+ GLID Sbjct: 154 LSERTGQPLEVIKKDVER--DNFME-----------------------AEEAKEYGLIDD 188 Query: 227 VGGQE 231 V Sbjct: 189 VITSR 193 >gi|225680955|gb|EEH19239.1| ATP-dependent Clp protease proteolytic subunit [Paracoccidioides brasiliensis Pb03] Length = 235 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 74/193 (38%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++++ S ++ ++ + D+ + + ++SPGGS AG A++ + + Sbjct: 47 IVCLNGEVDETLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA-- 104 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C + S V + Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRFCLPHSSV------MVHQ---------------- 142 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + ++ K + ++ ++ Y ++ + D+ + + G Sbjct: 143 PSGGYFGQATDI-AIHAKEILRVRRQLNEIYKRHLKK-----EMSLDEIEKWMERDYFMG 196 Query: 216 -AEAKKVGLIDVV 227 EA ++G++D + Sbjct: 197 AKEALEMGIVDEI 209 >gi|189463031|ref|ZP_03011816.1| hypothetical protein BACCOP_03733 [Bacteroides coprocola DSM 17136] gi|198276521|ref|ZP_03209052.1| hypothetical protein BACPLE_02716 [Bacteroides plebeius DSM 17135] gi|237708586|ref|ZP_04539067.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|260642222|ref|ZP_05414941.2| putative prophage L54a, Clp protease [Bacteroides finegoldii DSM 17565] gi|189430313|gb|EDU99297.1| hypothetical protein BACCOP_03733 [Bacteroides coprocola DSM 17136] gi|198270609|gb|EDY94879.1| hypothetical protein BACPLE_02716 [Bacteroides plebeius DSM 17135] gi|229457515|gb|EEO63236.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|260623181|gb|EEX46052.1| putative prophage L54a, Clp protease [Bacteroides finegoldii DSM 17565] Length = 368 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 42/212 (19%) Query: 30 HVEDNSPHVARIAIRGQIED-----SQELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 ++ + + I + G I D S + + + R + V ++S GG Y+G Sbjct: 28 NITTSDDGTSTIFLYGDIGDYTEVQSGRIAQELMEAERVS--RRIHVRINSNGGEVYSGI 85 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 AIF A++ + + V +AAS +I+ + ++ + L + Sbjct: 86 AIFNALRHSQAD--IRIYVDGIAASMASVIALCGKPVEMSKYAR------LMLH------ 131 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 SV + + + ++ ++ + Y +E + ++ Sbjct: 132 ---------SVSGGCYGNKQDLQRCM--EEIESLEGSLSEIY-------AERLGMSKEEV 173 Query: 205 LV-LSDGR-IW-TGAEAKKVGLIDVVGGQEEV 233 DG W T EA +G ID + + V Sbjct: 174 KQTYFDGEDHWLTAKEALDLGFIDDIYDADPV 205 >gi|225018528|ref|ZP_03707720.1| hypothetical protein CLOSTMETH_02475 [Clostridium methylpentosum DSM 5476] gi|224948729|gb|EEG29938.1| hypothetical protein CLOSTMETH_02475 [Clostridium methylpentosum DSM 5476] Length = 262 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 46/222 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I + I + L+V L++ GG AG AI I + KP ++ V S Sbjct: 75 EHVIPALVAIEQSPDIKGLVVILNTVGGDVEAGLAIAELIAGI--NKPTVSLVLGGGHSI 132 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G ++ ++ ++ + +P + + LGV Sbjct: 133 GVPLAVSAKKSFIVPSAS------MTVHPVRMSGLV--LGV------------------- 165 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGR-------IWTGAEAKK 220 P+ + + + VR V+++ NI D+ L + G + G +A + Sbjct: 166 --PQTLSYFDRMQERI----VRFVTDNSNIEADRFKQLMMTTGELVMDVGTVLDGQKAVE 219 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCD 262 GLID +GG + L + +D+ K ++ P D Sbjct: 220 EGLIDSMGGISDAIACLNEM-IDEEEAKREETAPEDQSEGGD 260 >gi|150016209|ref|YP_001308463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium beijerinckii NCIMB 8052] gi|149902674|gb|ABR33507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium beijerinckii NCIMB 8052] Length = 199 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLSGEVNDDSANLIVAQLLFLESEDPDKDIYIYINSPGGSITAGNAIYDTMQYIKCD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L+S + A + V + + + Sbjct: 88 -VSTICIGMAASMGAFLLSSGTKGKRFALPNAEV------MIHQPLGGFQGQATDFEIHA 140 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K + MK + SE K ++ ++ V+ Sbjct: 141 KRIL--KMKETLNRILSENTGKPLETIKADVERDN------------------------- 173 Query: 212 IWTGAEAKKVGLIDVV 227 + EAK GL+D V Sbjct: 174 FMSAEEAKAYGLVDEV 189 >gi|315639062|ref|ZP_07894230.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter upsaliensis JV21] gi|315480838|gb|EFU71474.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter upsaliensis JV21] Length = 194 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IVMLSGEINDDVASSIVAQLLFLEAEDPQKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 87 -VCTICIGQAASMGAFLLSCGAKQKRFALPNSR------IMIHQPLGGA----------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ N K ++ + + Sbjct: 129 -RGQATDI-----EIQAKEILRLKTILNEI-------LAQNTNQKIAKITKDTERDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 AVEAKEYGLIDKV 188 >gi|260906246|ref|ZP_05914568.1| Endopeptidase Clp [Brevibacterium linens BL2] Length = 198 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 36/170 (21%) Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AGYLISCAS 118 + D A + + ++SPGGS AG AI+ +Q +K V T MAAS +L+S + Sbjct: 51 AAEDPDAD-ISLYINSPGGSVTAGMAIYDTMQYIKPD--VSTVAMGMAASMGQFLLSSGA 107 Query: 119 -NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQM 177 A + + + P+ +++ Sbjct: 108 PGKRYATPHAR------ILMHQ-------------------PLGGIGG-----TATDIKI 137 Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +++ L +E ++ L +D W T EA + G ID Sbjct: 138 QAELILHMKKQMAELTAEQTGKTLEQILKDNDRDHWFTAEEALEYGFIDK 187 >gi|261419480|ref|YP_003253162.1| peptidase S14 ClpP [Geobacillus sp. Y412MC61] gi|319766296|ref|YP_004131797.1| peptidase S14 ClpP [Geobacillus sp. Y412MC52] gi|261375937|gb|ACX78680.1| peptidase S14 ClpP [Geobacillus sp. Y412MC61] gi|317111162|gb|ADU93654.1| peptidase S14 ClpP [Geobacillus sp. Y412MC52] Length = 246 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 51/203 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L+V L++ GG AG AI + + KP ++ V S Sbjct: 69 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLS--KPTVSVVLGGGHSI 126 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ + N ET+ + +P + + + Sbjct: 127 GVPIAVSCNYSFITETA------TMTIHP----------IRLTGLVIGV---------PQ 161 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GAE 217 + + MQ+ V VR V++ I +K L +++ G + Sbjct: 162 TFEYLDKMQERV-------VRFVTKHSKISEEKFKEL----MFSKGNLTRDIGTNVVGPD 210 Query: 218 AKKVGLIDVVGGQEEVWQSLYAL 240 A + GLID VGG + L L Sbjct: 211 AVRYGLIDEVGGVSQAMVKLREL 233 >gi|6723203|dbj|BAA89610.1| capsid protein [Bacteriophage WO] Length = 118 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D + Sbjct: 3 ESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGI 53 >gi|260769269|ref|ZP_05878202.1| nfed family protein [Vibrio furnissii CIP 102972] gi|260614607|gb|EEX39793.1| nfed family protein [Vibrio furnissii CIP 102972] Length = 446 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 45/256 (17%) Query: 11 RYVMLSLVTLTVVYFSWSSHVEDNSP-----HVARIAIRGQIEDS--QELIERIERISRD 63 R VM L+T + + + ++ N+P V IAI G I + +I+ ++R ++ Sbjct: 3 RRVMEVLLTSLLSFSTLATADTTNAPAAPSQTVPVIAISGAIGPAVGDYVIKELQRANQQ 62 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNI 120 + A+IV+L +PGG + I + I + + PV+ V AASAG I A +I Sbjct: 63 VNTPAVIVTLDTPGGLSSTLRDINQHI--LASDIPVLCLVYPPGARAASAGTYILYACHI 120 Query: 121 IVAAETSLVGS-----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAV 175 A + +G+ IG P DK SE Sbjct: 121 AAMAPATTLGAATPVQIG--GPSPGGGEQQDKP-------------------SEPTAMEK 159 Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEV 233 +++ D + ++R +++ R + + D + EA ++ +I+V+ +++ Sbjct: 160 KVLNDSI-----AYIRSLAQLRGRNVEWAEKAVRDAATLSAIEALEMNVINVMAESPQDL 214 Query: 234 WQSLYALGVDQSIRKI 249 ++ +D + R + Sbjct: 215 LNAVNGQTLDVNHRAV 230 >gi|256751183|ref|ZP_05492064.1| band 7 protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749908|gb|EEU62931.1| band 7 protein [Thermoanaerobacter ethanolicus CCSD1] Length = 697 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 101/280 (36%), Gaps = 46/280 (16%) Query: 25 FSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYA 82 S S V SP V ++I G I + + ++ ++ A+ +++ LS+PGG Sbjct: 21 LSSSKAVPPQSP-VYVLSIDGPIVPVVADYIESGLQEAEKN-GASCIVIELSTPGGLYST 78 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAA---SAGYLISCASNIIVAAETSLVGSIGVLFQYP 139 + I I + + PV+ V A SAG I+ ++N+ A S +G Sbjct: 79 TQKIVTKI--LNSPIPVVVYVSPAGAWAGSAGTFITLSANVAAMAPGSRIG--------- 127 Query: 140 YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + S ++ Q + ++R ++E+R Sbjct: 128 ------------------AAHPVSMEDDSALSDVQRQKLT----HDAAAWIRSIAENRGR 165 Query: 200 PYDKTL-VLSDGRIWTGAEAKKVGLID-VVGGQEEVWQSLYALGV---DQSIRKIKDWNP 254 + + + +T EA L+D ++ + + L V D +I ++ P Sbjct: 166 DPKNAEMAVIESKSFTDTEALNAHLVDFKATNLNDLLKKINGLTVKNFDGTITTLQTDGP 225 Query: 255 PKNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL-WAVWNP 293 K + + + + L+ + G+ +++P Sbjct: 226 IKYFPMSSAQKFLFAISDPNIAYLLMSAGILGIVLELYHP 265 >gi|323701887|ref|ZP_08113557.1| peptidase S14 ClpP [Desulfotomaculum nigrificans DSM 574] gi|323533191|gb|EGB23060.1| peptidase S14 ClpP [Desulfotomaculum nigrificans DSM 574] Length = 272 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 88/243 (36%), Gaps = 55/243 (22%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + V + ++ + I GQIE + +I ++ I + + +++ L+ Sbjct: 59 GTPAVPEVKSNIHCVTIVGQIEGHIMLPSQNKTTKYEHIIPQLVGIEQAEDIEGVLLILN 118 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI I + KP ++ V S G I+ +SN A T+ Sbjct: 119 TVGGDVEAGLAIAEVIATM--TKPTVSLVLGGGHSIGVPIAVSSNYSFIAPTAS------ 170 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P + G+ I + MQD V +R V+ Sbjct: 171 MTIHP-----IRLNGLVIGV--------------PQTYDYLDKMQDRV-------IRFVT 204 Query: 195 ESRNIPYDKTL-------VLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 E I K L+ G + G +A + GLID VGG + L + ++ Sbjct: 205 EHSKISEQKFRDLMFKTGELARDIGTVVIGKDAVEYGLIDEVGGIGKALAKLKQMIEERK 264 Query: 246 IRK 248 K Sbjct: 265 TTK 267 >gi|293115362|ref|ZP_05791142.2| Clp protease [Butyrivibrio crossotus DSM 2876] gi|292810238|gb|EFF69443.1| Clp protease [Butyrivibrio crossotus DSM 2876] Length = 211 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 54/218 (24%) Query: 41 IAIRGQIEDSQ-----------ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 + I G+IE E+I R+ I +D ++ +++ GG AG AI Sbjct: 18 VYILGEIEGHDGGGSDKNTKYDEIIPRLVSIENNDDVDGVLFVINTMGGDVSAGLAIAEM 77 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLG 149 I + KP ++ V + S G I+ A+N +++ V V+ Sbjct: 78 IAGLS--KPTVSLVIGESHSIGVPIAVAANYSFIVKSATV----VI-------------- 117 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 P++ + + + + + D VR +SE + + Sbjct: 118 --------HPVRMTGTILG--TRQTYRQFRSIQDRI----VRFISEHSRCGEESIEKMMM 163 Query: 210 ---------GRIWTGAEAKKVGLIDVVGGQEEVWQSLY 238 G I G EA + GLID G ++ W L Sbjct: 164 DTSMMSSDLGTILVGEEAVEAGLIDENGSIDKAWNKLK 201 >gi|281487011|gb|ADA71057.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++G+ D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ + Sbjct: 62 NHKSRSVSMTTNELTE 77 >gi|121612255|ref|YP_999911.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|167004871|ref|ZP_02270629.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|166201812|sp|A1VXS0|CLPP_CAMJJ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|87250345|gb|EAQ73303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter jejuni subsp. jejuni 81-176] Length = 194 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 87 -VCTICIGQAASMGAFLLSCGAEGKRFALPNSR------IMIHQPLGGA----------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ K ++ + + Sbjct: 129 -RGQATDI-----EIQAKEILRLKTILNDI-------LAKNTKQKVAKIAKDTERDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 TQEAKEYGLIDKV 188 >gi|323499265|ref|ZP_08104242.1| hypothetical protein VISI1226_03565 [Vibrio sinaloensis DSM 21326] gi|323315653|gb|EGA68687.1| hypothetical protein VISI1226_03565 [Vibrio sinaloensis DSM 21326] Length = 434 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 43/245 (17%) Query: 17 LVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLS 74 L+ + + V P V I+I G I + Q +IE I R ++ S ALI+++ Sbjct: 2 LLLCFSAFIAAEEAVPSKPPTVPLISIDGAIGPAVGQYVIEEIARANKVGS-PALIITID 60 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAETSLVG- 130 +PGG + I +AI + ++ P++ V AASAG I A +I A + +G Sbjct: 61 TPGGLVTSLRDINQAI--LNSQIPILCLVHPQGARAASAGTFILYACHIAAMAPATSLGA 118 Query: 131 ----SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSY 186 SIG P K SE + +++ D + Sbjct: 119 ATPVSIG--GPSPTQKEQES---------------------SEPSAMENKVLNDSI---- 151 Query: 187 HWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVGGQ-EEVWQSLYALGVDQ 244 ++R +++ R + + D + EA +I+++ +++ L V+ Sbjct: 152 -AYIRSLAQLRGRNAEWAEEAVRDAATLSATEALDNNVINLLADSPQDLLNKLNGQEVEV 210 Query: 245 SIRKI 249 + + Sbjct: 211 NQASV 215 >gi|91228617|ref|ZP_01262535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio alginolyticus 12G01] gi|254229904|ref|ZP_04923307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp. Ex25] gi|262394815|ref|YP_003286669.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25] gi|269965580|ref|ZP_06179694.1| ATP-dependent Clp protease proteolytic subunit [Vibrio alginolyticus 40B] gi|91187849|gb|EAS74163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio alginolyticus 12G01] gi|151937540|gb|EDN56395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp. Ex25] gi|262338409|gb|ACY52204.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25] gi|269829805|gb|EEZ84040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio alginolyticus 40B] Length = 208 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 72/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ +E P + +D R Sbjct: 153 AQEILT----------------IKQKLNKLL-----------AEHTGQPLEVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A + G++D V Sbjct: 185 DNFMSSEQAVEYGIVDAV 202 >gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus tusciae DSM 2912] gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus tusciae DSM 2912] Length = 196 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 42/196 (21%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K Sbjct: 28 RIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDIRLYINSPGGSITAGMAIYDTMQYIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V T MAAS +L++ + A S + + V+ + + Sbjct: 88 --VSTVCIGMAASMGAFLLAAGTKGKRFALPNSE------IMIHQPLGGVRGQAADIKIH 139 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + K SE + ++ ++ D F+ Sbjct: 140 ADWILRTKDK-INRILSERTGQPLEKIERDTDR--DNFMD-------------------- 176 Query: 212 IWTGAEAKKVGLIDVV 227 EAK GLID V Sbjct: 177 ---AEEAKAYGLIDEV 189 >gi|302817596|ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii] gi|300141641|gb|EFJ08350.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii] Length = 253 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + I G I D ++ ++ + ++ + + ++SPGG AG AI+ +Q +++ Sbjct: 55 IVCIHGPIADDTASLVVAQLLYLESENPLKPIHLYINSPGGVVTAGLAIYDTMQYIRS-- 112 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G L+ A G P + + + S Sbjct: 113 PVSTLCVGQAASMGSLLLAAGEP------------GQRRSLPNARVMVHQ----PSGGAS 156 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 E+ M+ ++ Y ++ +K + + + Sbjct: 157 GQASDIAIQAREILD-----MRSRLNKLY-------AKHTGSSIEKIDQSMERDHFMSPE 204 Query: 217 EAKKVGLIDVV 227 EAK+ GLID V Sbjct: 205 EAKEFGLIDEV 215 >gi|291542673|emb|CBL15783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus bromii L2-63] Length = 193 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 64/185 (34%), Gaps = 39/185 (21%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + ++ ++ + D + + ++SPGGS G AIF + +K V T MA Sbjct: 39 ASASVVVAQLLYLESKDPTKDISLYINSPGGSVTDGFAIFDTMNYIKCD--VSTICMGMA 96 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKA 162 AS +L++ + +A S + + + + + + + Sbjct: 97 ASMGAFLLAAGAKGKRLALPNSD------IMIHQPSGGAQGQATDMEIHTRHIL------ 144 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + + ++ + + ++++ N T +A + G Sbjct: 145 ----------DMKKRLNQILADNTGQPIDVIAKDTNRDN----------FMTAQQALEYG 184 Query: 223 LIDVV 227 LID V Sbjct: 185 LIDKV 189 >gi|153871192|ref|ZP_02000426.1| Peptidase S14, ClpP [Beggiatoa sp. PS] gi|152072341|gb|EDN69573.1| Peptidase S14, ClpP [Beggiatoa sp. PS] Length = 228 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 45/208 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 48 VIFLVGPVEDYTANLVVAQLLFLESENPEKDIHLYINSPGGSVSAGLAIYDTMQFIKPD- 106 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS L+S ++ S + + + + + Sbjct: 107 -VSTLCIGQAASMGALLLSGGADKKRYCLPHSR------IMIHQPLGGFQGQATDIDIHA 159 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR- 211 + + K + + +++ ++ P +K ++ R Sbjct: 160 REIL----------------KVRERLNEIL-----------AKHSGQPLEKIQKDTE-RD 191 Query: 212 -IWTGAEAKKVGLIDVVGGQEEVWQSLY 238 A + GL+D V + Sbjct: 192 NFMAAETAVEYGLVDAVLSTRHALTAAA 219 >gi|326561827|gb|EGE12162.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis 7169] gi|326563259|gb|EGE13526.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis 46P47B1] gi|326563373|gb|EGE13638.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis 12P80B1] gi|326565911|gb|EGE16072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis 103P14B1] gi|326568952|gb|EGE19021.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis BC1] gi|326569251|gb|EGE19312.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis BC7] gi|326571926|gb|EGE21931.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis BC8] gi|326575439|gb|EGE25364.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis 101P30B1] gi|326576473|gb|EGE26381.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis CO72] gi|326577944|gb|EGE27808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella catarrhalis O35E] Length = 217 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + D+ + + ++SPGG AG AI+ + + K Sbjct: 49 VIFLTGQVEDNMANLIVAQLLFLEADNPEKDIHLYINSPGGVVTAGMAIYDTMNFI---K 105 Query: 98 P-VITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P V T AAS G + A A S V + + + + Sbjct: 106 PHVSTICMGQAASMGSFLLSAGEKGKRYALANSRV------MIHQPLGGFRGQASDIEIH 159 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + +KA+ + RL++E P +K +D Sbjct: 160 AREII--ELKAKLN-------------------------RLLAEHTGQPIEKLERDTDRD 192 Query: 212 IW-TGAEAKKVGLIDVV 227 + + +A+ GL+DVV Sbjct: 193 HFMSAEQARDYGLVDVV 209 >gi|85376590|gb|ABC70512.1| capsid protein [Wolbachia phage WO] Length = 124 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 P + ++++ ++ V+ Y V L++ +RN+ + ++ ++ G +A ++GL D Sbjct: 1 PPGPMTSESLENLKSEVNRLYGMLVELIARNRNLSVEAIKS-TEAGLYFGEKAVEIGLAD 59 Query: 226 VV 227 + Sbjct: 60 GI 61 >gi|313680148|ref|YP_004057887.1| ATP-dependent clp protease proteolytic subunit clpp [Oceanithermus profundus DSM 14977] gi|313152863|gb|ADR36714.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oceanithermus profundus DSM 14977] Length = 194 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 44/202 (21%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G DSQ ++ ++ + + + + ++SPGG YAG AI+ +Q VK+ Sbjct: 27 RIIFLGTPIDSQVANTIVAQMLFLEAQNPNQEIKLYINSPGGDVYAGLAIYDTMQYVKS- 85 Query: 97 KPVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 PV T V MAAS +L++ + A + V + + + + Sbjct: 86 -PVATIVVGMAASMGAFLLAAGEAGQRYALPHARV------MIHQPWGGAQGQATDIAIQ 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + K+ +++ +++ ++ P +K SD Sbjct: 139 AEQIL----------------KSKKLLNELL-----------AKHTGQPVEKVEADSDRD 171 Query: 212 IW-TGAEAKKVGLIDVVGGQEE 232 W T EA+ GL+D V +E+ Sbjct: 172 FWMTADEARDYGLVDRVIARED 193 >gi|255528525|ref|ZP_05395307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] gi|296184877|ref|ZP_06853288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] gi|255507783|gb|EET84241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] gi|296050659|gb|EFG90082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium carboxidivorans P7] Length = 194 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 68/180 (37%), Gaps = 39/180 (21%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 VVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIYDTMQYIKPD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + VA + + + + +G+ + + K + F Sbjct: 102 FLLNAGAKGKRVALPNAE------IMIHQPLGGFQGQATDIGIHAERILKIK-KKLNTIF 154 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 SE + ++ ++ + + EAK+ GLID + Sbjct: 155 SERTGQPLETIEKDTERDN-------------------------FMSAEEAKEYGLIDEI 189 >gi|220916410|ref|YP_002491714.1| peptidase S14 ClpP [Anaeromyxobacter dehalogenans 2CP-1] gi|219954264|gb|ACL64648.1| peptidase S14 ClpP [Anaeromyxobacter dehalogenans 2CP-1] Length = 260 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 29/185 (15%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G +Q E++++ D A + V ++SPGG G+A+ ++ ++ + V V Sbjct: 59 GVGISAQGFREQLKQA---DGARRVNVHINSPGGDVDQGKAMLSGLRSLRAGEKV-AVVE 114 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 +AASA +++ ++ +V + V + ++ + Sbjct: 115 GLAASAATVVAMGADRVVMEPEA------VFMIHEASGGMWG---------SAADHEKFA 159 Query: 165 SPFSEVNPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 N + + +D ++E + + G A A+++G Sbjct: 160 EILRMDNAAVRALYAKKTGLDD------GRIAE--LMAAQEPGGTVPGTYMDAARARELG 211 Query: 223 LIDVV 227 D V Sbjct: 212 FADEV 216 >gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter tengcongensis MB4] gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter tengcongensis MB4] Length = 198 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 76/192 (39%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + +I D+ +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 32 IVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIYDTMQYIKPD- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T MAAS A +L++ + A S I + + ++ + + + + Sbjct: 91 -VVTLCVGMAASMAAFLLAAGAKGKRFALPNSE---IMIHQPWGGMQGQATDIKIHAERL 146 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K E SE + ++ ++ ++ Y T Sbjct: 147 LRLRDKLE-RILSENTGQPLEKIKADMERDY-------------------------FMTA 180 Query: 216 AEAKKVGLIDVV 227 EAK G+ID + Sbjct: 181 EEAKTYGIIDDI 192 >gi|116617520|ref|YP_817891.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227432636|ref|ZP_03914612.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|116096367|gb|ABJ61518.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227351606|gb|EEJ41856.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 200 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I ++G+IEDS ++ ++ + D + + ++SPGGS AG +I + +K Sbjct: 27 IILVQGEIEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIKA-- 84 Query: 98 PVITEVHEMAASAGYLISCASNI 120 PV T V +AAS G +I+ + Sbjct: 85 PVTTIVMGLAASMGTIIAASGEK 107 >gi|56460113|ref|YP_155394.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina loihiensis L2TR] gi|67460202|sp|Q5QXN8|CLPP_IDILO RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|56179123|gb|AAV81845.1| Protease subunit of ATP-dependent Clp protease [Idiomarina loihiensis L2TR] Length = 206 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I GQ+ED + ++ ++ + D+ + + ++SPGG AG AI+ ++ +K Sbjct: 38 VIFCCGQVEDHMANLIVAQLLFLESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + Sbjct: 97 -VSTVCMGQAASMGAFLLAGGAQGKRYCLPNSRV------MIHQPLGGFQGQASDFEIHA 149 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + + + ++ + V+ R+ D Sbjct: 150 KQIL----------------DLKERLNRMLAENTGQDYEKVA--RDTDRD--------HF 183 Query: 213 WTGAEAKKVGLIDVV 227 + E+ GL+D + Sbjct: 184 LSAEESIDYGLVDGI 198 >gi|12719432|ref|NP_075503.1| protease [Staphylococcus phage phiSLT] gi|21283128|ref|NP_646216.1| protease [Staphylococcus aureus subsp. aureus MW2] gi|29028649|ref|NP_803338.1| scaffolding protease [Staphylococcus phage phi 12] gi|49485840|ref|YP_043061.1| phage protease [Staphylococcus aureus subsp. aureus MSSA476] gi|57651296|ref|YP_185261.1| prophage L54a, Clp protease, putative [Staphylococcus aureus subsp. aureus COL] gi|66395523|ref|YP_239858.1| ORF015 [Staphylococcus phage 42E] gi|66395672|ref|YP_240004.1| ORF016 [Staphylococcus phage 47] gi|87161020|ref|YP_494099.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195249|ref|YP_500052.1| scaffolding protease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|156603996|ref|YP_001429942.1| putative protease [Staphylococcus phage tp310-2] gi|161509680|ref|YP_001575339.1| bacteriophage protease [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|209363589|ref|YP_002268007.1| prohead protease [Staphylococcus phage phi2958PVL] gi|215401148|ref|YP_002332403.1| putative scaffold protein [Staphylococcus phage phiSauS-IPLA35] gi|253315475|ref|ZP_04838688.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|257432454|ref|ZP_05608817.1| scaffolding protease [Staphylococcus aureus subsp. aureus E1410] gi|258420298|ref|ZP_05683245.1| scaffolding protease [Staphylococcus aureus A9719] gi|258448837|ref|ZP_05696947.1| scaffolding protease [Staphylococcus aureus A6224] gi|282911087|ref|ZP_06318889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WBG10049] gi|282919223|ref|ZP_06326958.1| phage protease [Staphylococcus aureus subsp. aureus C427] gi|284024509|ref|ZP_06378907.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus subsp. aureus 132] gi|294848478|ref|ZP_06789224.1| phage protease [Staphylococcus aureus A9754] gi|295407559|ref|ZP_06817352.1| phage protease [Staphylococcus aureus A8819] gi|296276330|ref|ZP_06858837.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus subsp. aureus MR1] gi|297207829|ref|ZP_06924263.1| bacteriophage protease [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246589|ref|ZP_06930422.1| phage protease [Staphylococcus aureus A8796] gi|297591011|ref|ZP_06949649.1| bacteriophage protease [Staphylococcus aureus subsp. aureus MN8] gi|300911915|ref|ZP_07129358.1| bacteriophage protease [Staphylococcus aureus subsp. aureus TCH70] gi|12697862|dbj|BAB21734.1| protease [Staphylococcus phage phiSLT] gi|18920573|gb|AAL82313.1| scaffolding protease [Staphylococcus phage phi 12] gi|21204568|dbj|BAB95264.1| protease [Staphylococcus aureus subsp. aureus MW2] gi|49244283|emb|CAG42710.1| phage protease [Staphylococcus aureus subsp. aureus MSSA476] gi|57285482|gb|AAW37576.1| prophage L54a, Clp protease, putative [Staphylococcus aureus subsp. aureus COL] gi|62636016|gb|AAX91127.1| ORF015 [Staphylococcus phage 42E] gi|62636096|gb|AAX91207.1| ORF016 [Staphylococcus phage 47] gi|87126994|gb|ABD21508.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202807|gb|ABD30617.1| scaffolding protease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|154818082|gb|ABS87509.1| putative protease [Staphylococcus phage tp310-2] gi|160368489|gb|ABX29460.1| bacteriophage protease [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|208973090|dbj|BAG74406.1| prohead protease [Staphylococcus phage phi2958PVL] gi|215260499|gb|ACJ64629.1| gp40 [Staphylococcus phage phiSauS-IPLA35] gi|257283333|gb|EEV13465.1| scaffolding protease [Staphylococcus aureus subsp. aureus E1410] gi|257843723|gb|EEV68125.1| scaffolding protease [Staphylococcus aureus A9719] gi|257857874|gb|EEV80765.1| scaffolding protease [Staphylococcus aureus A6224] gi|282317033|gb|EFB47407.1| phage protease [Staphylococcus aureus subsp. aureus C427] gi|282324782|gb|EFB55092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus WBG10049] gi|294824504|gb|EFG40927.1| phage protease [Staphylococcus aureus A9754] gi|294967578|gb|EFG43614.1| phage protease [Staphylococcus aureus A8819] gi|296887545|gb|EFH26444.1| bacteriophage protease [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176547|gb|EFH35812.1| phage protease [Staphylococcus aureus A8796] gi|297575897|gb|EFH94613.1| bacteriophage protease [Staphylococcus aureus subsp. aureus MN8] gi|300886161|gb|EFK81363.1| bacteriophage protease [Staphylococcus aureus subsp. aureus TCH70] gi|302333119|gb|ADL23312.1| caseinolytic phage protease [Staphylococcus aureus subsp. aureus JKD6159] gi|312438083|gb|ADQ77154.1| bacteriophage protease [Staphylococcus aureus subsp. aureus TCH60] gi|315128434|gb|EFT84442.1| bacteriophage protease [Staphylococcus aureus subsp. aureus CGS03] gi|315197736|gb|EFU28070.1| bacteriophage protease [Staphylococcus aureus subsp. aureus CGS01] gi|329729413|gb|EGG65818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21189] gi|329730627|gb|EGG67012.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Staphylococcus aureus subsp. aureus 21193] Length = 257 Score = 59.4 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 132 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 133 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 160 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID + G E+ S+ Sbjct: 161 MLDAETWLTAEEALSFGLIDEILGANEIAASISK 194 >gi|332358291|gb|EGJ36117.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK355] Length = 196 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V +AAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGVAASMGTIIASSGAK------------GKRFMLPNAEYLIHQ---------- 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM S + + ++ + + + + ++++E+ ++ ++ W + Sbjct: 123 -PMGGAGSGTQQT---DMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQ 178 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 179 ETLEYGFIDEI 189 >gi|323439020|gb|EGA96753.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus O11] Length = 255 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 18 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 74 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 75 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 130 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 131 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 158 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID + G E+ S+ Sbjct: 159 MLDAETWLTAEEALSFGLIDEILGANEIAASISK 192 >gi|281487003|gb|ADA71053.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++G+ D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ + Sbjct: 62 NHKSRSVSMTTNELTE 77 >gi|302382854|ref|YP_003818677.1| endopeptidase Clp [Brevundimonas subvibrioides ATCC 15264] gi|302193482|gb|ADL01054.1| Endopeptidase Clp [Brevundimonas subvibrioides ATCC 15264] Length = 213 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 37/198 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ED + ++ + ++ + + ++SPGG + AI+ +Q +K+ Sbjct: 38 IIFLTGPFEDGMASLICAQLLFLESENPKKEISMYINSPGGQVTSALAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T V MAASAG LI + A+ +A + + + Sbjct: 96 PVSTVVMGMAASAGSLILTAGAAGQRIALPNAR------IMVHQ---------------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E++ ++ + ++ Y Y++ D + Sbjct: 134 PSGGFRGQASDI-ELHAADIRYTKRRLNEIYVH-------HTGRTYEEVEKTLDRDHFMD 185 Query: 215 GAEAKKVGLIDVVGGQEE 232 AK+ G++D V + + Sbjct: 186 AEAAKEWGIVDHVYDKRD 203 >gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. AS9601] gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9301] gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. AS9601] gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9301] Length = 214 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 48/199 (24%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I D S L+ ++ + +D + + ++SPGGS AG AI+ +Q++ Sbjct: 50 RIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMAIYDTMQQISPD 109 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A S + + Sbjct: 110 --VVTICFGVAASMGAFLLSGGAKGKRLALPNSR------IMIH---------------- 145 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSD 209 + Q ++ + + F++ L++E P +K ++ Sbjct: 146 -------------QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTE 192 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + + +EA + GLID V Sbjct: 193 RDYFLSPSEAVEYGLIDKV 211 >gi|110633884|ref|YP_674092.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mesorhizobium sp. BNC1] gi|116243115|sp|Q11I48|CLPP2_MESSB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|110284868|gb|ABG62927.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chelativorans sp. BNC1] Length = 208 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ++D+ + ++ + ++ + ++SPGG +G AI+ +Q +K Sbjct: 33 IIFLNGQVDDNSAALVCAQMLHLEAENPKKEIAFYINSPGGVVSSGFAIYDTMQFIKC-- 90 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G + A G+ P L + Sbjct: 91 PVATLCLGTAASMGSFLLMAGER------------GMRVALPNASIILHQ---------- 128 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 F + Q+ V +RL +E + D + T Sbjct: 129 -----PLGGFQGQASDIERHAQN-VMRHKRRMIRLYAEHCGRAEEDVERTLDRDFFMTAE 182 Query: 217 EAKKVGLIDVV 227 +A++ GL+D V Sbjct: 183 DAREWGLVDHV 193 >gi|288556926|ref|YP_003428861.1| hypothetical protein BpOF4_19650 [Bacillus pseudofirmus OF4] gi|288548086|gb|ADC51969.1| hypothetical protein BpOF4_19650 [Bacillus pseudofirmus OF4] Length = 249 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 43/209 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + ++ L++ L++ GG AG AI + + KP +T V S Sbjct: 70 EHIIPQLVAVEQNPKIEGLLLILNTVGGDVEAGLAISEMVASMS--KPSVTLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ A+N A+T+ L G IGV + Y+ +++ +S + +S Sbjct: 128 GVPIAVAANYSFIAKTATMTIHPVRLTGLVIGVPQTFEYLDKMQERV-ISFVTQQSG--- 183 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 ++ + F L+ N+ D + G +A + Sbjct: 184 --------ISEE--------------KFKELMLSKGNLTRDIGTNV------VGTDAVEY 215 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 GLID VGG + L L K K Sbjct: 216 GLIDEVGGIGSALKKLNELIDANKPVKEK 244 >gi|281487001|gb|ADA71052.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++G+ D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSTEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ + Sbjct: 62 NHKSRSVSMTTNELTE 77 >gi|157414262|ref|YP_001485128.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9215] gi|157388837|gb|ABV51542.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9215] Length = 214 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 48/199 (24%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I D S L+ ++ + +D + + ++SPGGS AG AI+ +Q++ Sbjct: 50 RIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMAIYDTMQQISPD 109 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A S + + Sbjct: 110 --VVTICFGVAASMGAFLLSGGAKGKRLALPNSR------IMIH---------------- 145 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSD 209 + Q ++ + + F++ L++E P +K ++ Sbjct: 146 -------------QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTE 192 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + + +EA + GLID V Sbjct: 193 RDYFLSPSEAVEYGLIDKV 211 >gi|154686096|ref|YP_001421257.1| TepA [Bacillus amyloliquefaciens FZB42] gi|154351947|gb|ABS74026.1| TepA [Bacillus amyloliquefaciens FZB42] Length = 245 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV + Y+ +++ V+ + S+ Sbjct: 126 GVPIAVSCDHSFIAETATMTIHPVRLTGLVIGVPQTFEYLDKMQERV-VNFVTHHSN--- 181 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 ++ + F L+ N+ D + G +A Sbjct: 182 --------ISEE--------------KFKELMFSKGNLTRDIGTNV------VGKDAADY 213 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + + L L Sbjct: 214 GLIDAVGGVGQAIKKLNQL 232 >gi|320140399|gb|EFW32254.1| Clp protease [Staphylococcus aureus subsp. aureus MRSA131] gi|320142757|gb|EFW34560.1| Clp protease [Staphylococcus aureus subsp. aureus MRSA177] Length = 255 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 18 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 74 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 75 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 130 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 131 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 158 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID + G E+ S+ Sbjct: 159 MLDAETWLTAEEALSFGLIDEILGANEIAASISK 192 >gi|21228980|ref|NP_634902.1| hypothetical protein MM_2878 [Methanosarcina mazei Go1] gi|20907521|gb|AAM32574.1| hypothetical protein MM_2878 [Methanosarcina mazei Go1] Length = 243 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 75/192 (39%), Gaps = 34/192 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 ED+++++ I + L + L +PGG +A I RA++ + K + + Sbjct: 42 EDAEQVLRWIRKYRDYP----LELILHTPGGQLHASIQIARALKN--HPKKTRVLIPHYS 95 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 S G +I+ A++ IV + +++G I ++G I+ V +P + Sbjct: 96 MSGGTIIALAADEIVMDKDAVIGPI------------DPQVGDPIRGVFPAPSWIHAAET 143 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSE----------SRNIPYDK-TLVLSDGRI---- 212 + + ++ + R V++ + ++ L G + Sbjct: 144 KKEDADDSTLVMSDISRKALRLTRNVAKELLEGKIQPDGKEDRLEEVVEKLVSGEMIHST 203 Query: 213 -WTGAEAKKVGL 223 + EAK++GL Sbjct: 204 PLSAREAKELGL 215 >gi|125975222|ref|YP_001039132.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium thermocellum ATCC 27405] gi|256003116|ref|ZP_05428108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium thermocellum DSM 2360] gi|281419196|ref|ZP_06250212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium thermocellum JW20] gi|166201818|sp|A3DJ10|CLPP_CLOTH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|125715447|gb|ABN53939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium thermocellum ATCC 27405] gi|255992807|gb|EEU02897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium thermocellum DSM 2360] gi|281407062|gb|EFB37324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium thermocellum JW20] gi|316939386|gb|ADU73420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium thermocellum DSM 1313] Length = 194 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 80/193 (41%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +I D + ++ ++ + +D + + ++SPGGS AG AI+ +Q VK Sbjct: 29 IIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPGGSVTAGFAIYDTMQYVKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + A S + + + + Sbjct: 88 -VSTICIGMAASMGAFLLAAGAKGKRFALPNSE------IMIHQPLGGARGQ-------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++ +K ++ + + +++ ++ +SE P++K ++ + + Sbjct: 133 -ATDIK--------IHAEQIIKIKNKLNRI-------LSERTGQPFEKIERDTERDFFMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK G++D V Sbjct: 177 AEEAKAYGIVDEV 189 >gi|302391398|ref|YP_003827218.1| hypothetical protein Acear_0611 [Acetohalobium arabaticum DSM 5501] gi|302203475|gb|ADL12153.1| protein of unknown function DUF107 [Acetohalobium arabaticum DSM 5501] Length = 436 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 7 KIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIE-DSQELIERIERISRDDS 65 ++ R++ L L+ + + S+S+ E + + I + G+I +ER + + Sbjct: 6 RLNQRWMALILILVIGLLLSFSAVGEAEAKTIYEIPVEGEINLGLARFVERGIAQAENSQ 65 Query: 66 ATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAE 125 A A+++++ + GG A I I + PV+ V A SAG LI+ AS+ I Sbjct: 66 AEAILLTVDTFGGLVKAATMIRDDI--LGTELPVVAYVKNRAWSAGALITIASSDIFMDS 123 Query: 126 TSLVG 130 S +G Sbjct: 124 GSSIG 128 >gi|295110105|emb|CBL24058.1| Protease subunit of ATP-dependent Clp proteases [Ruminococcus obeum A2-162] Length = 240 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 43/209 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ ++ I D L++ L++ GG AG AI I + P ++ V S Sbjct: 64 EHVLPKLALIEDDKDVDGLLILLNTVGGDVEAGLAIAEMIASLS--IPTVSLVLGGGHSI 121 Query: 111 GYLISCASNIIVAAETSL-----VGS----IGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G ++ +++ A ++ V S IGV Y ++ D++ + + Sbjct: 122 GVPMAVSADYSFAVPSATMVIHPVRSSGMFIGVAQSYRNIEKIQDRI--------TGFIA 173 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 A E + ++D+S V+ V G + G EA K Sbjct: 174 AHSGTTQERLEE------LMLDTS--QLVKDV----------------GTMLEGREAVKE 209 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 GLI+ +GG E L+ + ++ K Sbjct: 210 GLINEIGGIREALARLHQMIEEKEAADKK 238 >gi|116754831|ref|YP_843949.1| hypothetical protein Mthe_1537 [Methanosaeta thermophila PT] gi|116666282|gb|ABK15309.1| protein of unknown function DUF114 [Methanosaeta thermophila PT] Length = 301 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+E++ I D +I+ +PGG A A I A++ R VI + Sbjct: 93 IDDSEEVLRAIRSAPNDVPID-IILH--TPGGLALAATQIALALKNHPARTSVI--IPHY 147 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A + I+ + +G Sbjct: 148 AMSGGTLIALAVDEIIMDPNAALG 171 >gi|15618431|ref|NP_224716.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila pneumoniae CWL029] gi|15836051|ref|NP_300575.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila pneumoniae J138] gi|16752522|ref|NP_444784.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila pneumoniae AR39] gi|33241872|ref|NP_876813.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila pneumoniae TW-183] gi|6831515|sp|Q9Z832|CLPP1_CHLPN RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|4376809|gb|AAD18660.1| CLP Protease [Chlamydophila pneumoniae CWL029] gi|7189161|gb|AAF38099.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila pneumoniae AR39] gi|8978891|dbj|BAA98726.1| CLP protease [Chlamydophila pneumoniae J138] gi|33236381|gb|AAP98470.1| endopeptidase [Chlamydophila pneumoniae TW-183] gi|269303395|gb|ACZ33495.1| Clp protease [Chlamydophila pneumoniae LPCoLN] Length = 191 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 41/186 (22%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + + I+++ + D ++ ++SPGGS AG A++ I+ + + PV T V +AA Sbjct: 33 SASDAIKKLWYLELKDPGKPIVFVINSPGGSVDAGFAVWDQIKMLTS--PVTTVVTGLAA 90 Query: 109 SAGYLISCAS--NIIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 S G ++S + A S + SIG P + L + + + + Sbjct: 91 SMGSVLSLCAAPGRRFATPHSRIMIHQPSIG----GP-ITGQATDLDIHAREILKTK-AR 144 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKV 221 + E + +++ +D R++ W T EAK Sbjct: 145 IIDVYVEATNQPRDIIEKAID-------------RDM-------------WMTANEAKDF 178 Query: 222 GLIDVV 227 GL+D + Sbjct: 179 GLLDGI 184 >gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella parvula DSM 2008] gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella parvula DSM 2008] Length = 197 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 75/202 (37%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q + K Sbjct: 28 IIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQYI---K 84 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + V A+ L++ + A + + + V+ ++ + Sbjct: 85 PDVSTICVGSAASMGAVLLTAGTKGKRYALPHAR------IMIHQPLGGVQGQASEIEIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ S + +V+ R+ D Sbjct: 139 AREILR----------------MREELNGILASRSGQDIEVVA--RDTDRDN-------- 172 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GLID V +E V Sbjct: 173 FMSAQDAVEYGLIDEVLTRESV 194 >gi|115311350|sp|Q3M726|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 Length = 214 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D+ ++ ++ + +DS + + ++SPGGS YAG AI+ IQ+++ Sbjct: 37 IIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPD- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+T +AAS G + A G P + + + Sbjct: 96 -VVTICFGLAASMGAFLLTAGTK------------GKRMSLPDSRIMIHQ---------- 132 Query: 158 SPMKAEPSPFSEVNPKAVQM-MQD-VVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 P +A+ + +Q + +L++ P ++ +D + + Sbjct: 133 --------PLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMS 184 Query: 215 GAEAKKVGLIDVV 227 EAK GLID V Sbjct: 185 AEEAKNYGLIDQV 197 >gi|327462069|gb|EGF08398.1| ATP-dependent Clp protease, protease subunit [Streptococcus sanguinis SK1057] Length = 196 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V +AAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGVAASMGTVIASSGAK------------GKRFMLPNAEYLIHQ---------- 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM S + + ++ + + + + ++++E+ ++ ++ W + Sbjct: 123 -PMGGAGSGTQQT---DMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQ 178 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 179 ETLEYGFIDEI 189 >gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum reducens MI-1] gi|172044337|sp|A4J7L9|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfotomaculum reducens MI-1] Length = 195 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 74/196 (37%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G I+D + +I + + +D + + ++SPGG AG AI+ +Q +K Sbjct: 30 IIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLAIYDTMQYIKPA- 88 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + A + + + V+ + + Sbjct: 89 -VSTICLGQAASMGSFLLAAGAPGKRYALPMAR------IMIHQPLGGVQGQATDIDIH- 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + M+D+++ ++ P ++ ++ Sbjct: 141 -------------------AKEILRMKDLLND-------RLAHHTGQPLEQITRDTERDY 174 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAKK GLID V Sbjct: 175 FMSAEEAKKYGLIDEV 190 >gi|312796430|ref|YP_004029352.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Burkholderia rhizoxinica HKI 454] gi|312168205|emb|CBW75208.1| ATP-dependent endopeptidase clp proteolytic subunit clpP (EC 3.4.21.92) [Burkholderia rhizoxinica HKI 454] Length = 238 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 77/194 (39%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 73 LVFLVGEVNDQAANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPD- 131 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L++ + +A + V + + Sbjct: 132 -VTTLCMGLAASMGAFLLAAGAKGKRIALPNARV------MIHQPLGGA----------- 173 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 E+ + + +++ ++ L+++ P ++ +D R Sbjct: 174 -RGQASDI-----EIQAREILFLKERLN-------NLLAQHTGQPVEQIQRDTD-RDNFM 219 Query: 214 TGAEAKKVGLIDVV 227 + +A+ GLID V Sbjct: 220 SAEDAQAYGLIDQV 233 >gi|294055658|ref|YP_003549316.1| protein of unknown function DUF107 [Coraliomargarita akajimensis DSM 45221] gi|293614991|gb|ADE55146.1| protein of unknown function DUF107 [Coraliomargarita akajimensis DSM 45221] Length = 499 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 5/100 (5%) Query: 38 VARIAIRGQIE--DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 V I I G I + L ++ +D +I+ + +PGG+ + + + Sbjct: 64 VYVIPIEGPIAKPNLYILRRGLKEAINND-VEMVILKMDTPGGALGVCLEMMEMLDRFDG 122 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 +V A SAG LI+ ++ I A +GS G++ Sbjct: 123 VTATYVDVD--AISAGSLIAMTTDEIYFAPRGKIGSTGII 160 >gi|6723199|dbj|BAA89608.1| capsid protein [Bacteriophage WO] Length = 123 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTAFFEFIN 61 Query: 236 S 236 Sbjct: 62 K 62 >gi|304395499|ref|ZP_07377382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp. aB] gi|304356793|gb|EFM21157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp. aB] Length = 207 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ ++ +K Sbjct: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV------MIHQPLGGYQGQASDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K Q M +++ +E ++ ++ R Sbjct: 154 REIL----------------KVKQRMNELM-----------AEHTGKTLEEIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA + GL+D + Sbjct: 187 FLSASEAVEYGLVDSI 202 >gi|147921240|ref|YP_684947.1| hypothetical protein RCIX123 [uncultured methanogenic archaeon RC-I] gi|110620343|emb|CAJ35621.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 290 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 I+DS+E++ I D + + +PGG A A I A++ RK VI Sbjct: 76 IDDSEEVLRAIRTTPPDVPID---LIMHTPGGIALAATQIALALKSHPARKTVIV--PHY 130 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 131 AMSGGTLIALAADEILMDPHAVLG 154 >gi|57242492|ref|ZP_00370430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter upsaliensis RM3195] gi|57016777|gb|EAL53560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter upsaliensis RM3195] Length = 194 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 74/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IVMLSGEINDDVASSIVAQLLFLEAEDPQKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 87 -VCTICIGQAASMGAFLLSCGAKQKRFALPNSR------IMIHQPLGGA----------- 128 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ +++ ++++ N + ++ + + Sbjct: 129 -RGQATDI-----EIQAKEILRLKTILNEI-------LAQNTNQKIARITKDTERDFFMS 175 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 176 AIEAKEYGLIDKV 188 >gi|309811144|ref|ZP_07704940.1| endopeptidase Clp [Dermacoccus sp. Ellin185] gi|308434874|gb|EFP58710.1| endopeptidase Clp [Dermacoccus sp. Ellin185] Length = 209 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ ++ +D + + ++SPGGS AG AIF +Q V N V T +A Sbjct: 35 DNANAICAQLLLLAAEDPEKDIWLYINSPGGSVTAGMAIFDTMQWVPND--VCTVAMGLA 92 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L+S + A + + + P+ Sbjct: 93 ASMGQFLLSAGAKGKRYATPHAR------IMMHQ-------------------PLGGIQG 127 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 S+V +A Q++ L++E P +K SD R +T AEAK+ G + Sbjct: 128 TASDVKTQAEQLL-----HIKKQMAELIAEHTGQPVEKISADSDRDRWFTAAEAKEYGFV 182 Query: 225 DVV 227 D V Sbjct: 183 DHV 185 >gi|304311290|ref|YP_003810888.1| ATP-dependent Clp protease proteolytic subunit [gamma proteobacterium HdN1] gi|301797023|emb|CBL45236.1| ATP-dependent Clp protease proteolytic subunit [gamma proteobacterium HdN1] Length = 189 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q +K Sbjct: 24 LIFMVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKAD- 82 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + A S V + + + + Sbjct: 83 -VSTICVGQACSMGAFLLAAGAPGKRYALPNSRV------MIHQPLGGFQGQASDIEIHA 135 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR- 211 + + + M+ ++ +++ P +K +D R Sbjct: 136 REIIT--------------------MKRRLNEM-------LAKHSGQPIEKVEGDTD-RD 167 Query: 212 -IWTGAEAKKVGLIDVV 227 + +AK+ GL+D V Sbjct: 168 NFMSAFDAKEYGLVDQV 184 >gi|296536161|ref|ZP_06898289.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957] gi|296263532|gb|EFH10029.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957] Length = 213 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D S + ++ + ++ + ++SPGG AG A++ +Q ++ Sbjct: 39 IIFLTGPVYDQMSSLICAQLLFLESENPNKDIAFYINSPGGVVSAGLAMYDTMQYIRA-- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T MAAS L++ + A S I V + + + + + Sbjct: 97 PVSTVCLGMAASMGSLLLTAGAKGKRFALPNSR---IMVHQPSGGAQGQATDIEIQAREI 153 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWT 214 + ++ ++ Y + P ++ L + Sbjct: 154 LA--------------------LRKRLNQIY-------VKHTGQPIEEIERKLERDSYMS 186 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 187 AEEAKEFGLIDEV 199 >gi|225155839|ref|ZP_03724325.1| Endopeptidase Clp [Opitutaceae bacterium TAV2] gi|224803389|gb|EEG21626.1| Endopeptidase Clp [Opitutaceae bacterium TAV2] Length = 218 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +I + G + D ++++ ER+ + + ++SPGGS AG AI+ +Q + + Sbjct: 52 KIFLWGAVTDESAKDITERLLYLEAIAPGKDITFYINSPGGSITAGMAIYDTMQLISS-- 109 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ V MAAS G ++ + G F YP+ + + + +S + + Sbjct: 110 PITVVVTGMAASMGSILLSGAPK------------GRRFLYPHSRVLIHQPLISGRFI-- 155 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GA 216 P + + ++ ++ ++ ++ + P ++ +D + Sbjct: 156 GPATDIN-----IQAQEMEKLRAELNQI-------LANASGQPIERINKDTDRDFYLNAQ 203 Query: 217 EAKKVGLIDVV 227 EA GL D + Sbjct: 204 EAIAYGLADKI 214 >gi|238650581|ref|YP_002916433.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia peacockii str. Rustic] gi|259585964|sp|C4K1D4|CLPP_RICPU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|238624679|gb|ACR47385.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia peacockii str. Rustic] Length = 201 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 44 IVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 101 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 102 LLLCGGEK------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 140 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 141 QETLKIKRLLNELYSKHTEQELKHIEKSMERDN------FMSPEEAKKFGLVDNIMSSRD 194 Query: 233 VWQSLYA 239 L Sbjct: 195 AMTLLAK 201 >gi|84387735|ref|ZP_00990751.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus 12B01] gi|218710174|ref|YP_002417795.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus LGP32] gi|254763809|sp|B7VI00|CLPP_VIBSL RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|84377418|gb|EAP94285.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus 12B01] gi|218323193|emb|CAV19370.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus LGP32] Length = 208 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 IIFLTGQVEDHMANLVVAQLLFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 99 PNVSTVCMGQACSMGAFLLAGGTPGKRHVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + +V R+ D Sbjct: 153 AQEILT----------------IKQKLNKLLAEHTGQPLEVVE--RDTDRDN-------- 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 187 FMSADQAVEYGLVDSV 202 >gi|225627583|ref|ZP_03785620.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti str. Cudo] gi|237815533|ref|ZP_04594530.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus str. 2308 A] gi|225617588|gb|EEH14633.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti str. Cudo] gi|237788831|gb|EEP63042.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus str. 2308 A] Length = 247 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 75 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 132 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 133 PVSTLCMGQAASMGSLLLTAGATGHRYALPNAR------IMVHQ---------------- 170 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + YD D + T Sbjct: 171 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYDTIERTLDRDHFMT 222 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 223 AQEALEFGLIDKVVEARDV 241 >gi|332850978|ref|ZP_08433117.1| endopeptidase Clp [Acinetobacter baumannii 6013150] gi|332870629|ref|ZP_08439369.1| endopeptidase Clp [Acinetobacter baumannii 6013113] gi|332730322|gb|EGJ61645.1| endopeptidase Clp [Acinetobacter baumannii 6013150] gi|332732098|gb|EGJ63368.1| endopeptidase Clp [Acinetobacter baumannii 6013113] Length = 279 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 33/193 (17%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 +RI R + ++V+++SPGG + G I+ +++ V V +AASA Sbjct: 59 TAKRISAALRSMNGADVVVNINSPGGDVFEGLTIYNLLREY--EGHVTVRVLGLAASAAS 116 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 I+ A++ I A G + Sbjct: 117 FIAMAADEIQIARA------GFFMIHNAWTGVW------------GNRNDM-----RETA 153 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQE 231 ++ + + + Y + D+ D W G + + G D + Sbjct: 154 DFLEQIDETIADIYSI-------RTGLSIDELKAQMDKESWINGKNSVEQGFADSYLDSD 206 Query: 232 EVWQSLYALGVDQ 244 V + D+ Sbjct: 207 VVEEGAANSAKDR 219 >gi|283469602|emb|CAQ48813.1| protease [Staphylococcus aureus subsp. aureus ST398] gi|283470729|emb|CAQ49940.1| protease [Staphylococcus aureus subsp. aureus ST398] Length = 257 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 50/212 (23%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRK-- 130 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 ++ V +S+Y +++++ + + Sbjct: 131 ----------------------TADLLEKTDAVSNSAYLD------KAKDLDQEHLKQML 162 Query: 209 DGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 D W T EA GLID + G E+ S+ Sbjct: 163 DAETWLTAEEALSFGLIDEILGANEIAASISK 194 >gi|198283159|ref|YP_002219480.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667656|ref|YP_002425388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247680|gb|ACH83273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519869|gb|ACK80455.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidithiobacillus ferrooxidans ATCC 23270] Length = 214 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q V+ K Sbjct: 44 VVFLVGQVEDMMANLVVAQLLFLEAENPDKDIALYINSPGGSVTAGMAIYDTMQFVR-PK 102 Query: 98 PVITEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIK 153 + + A+ L++ + A + + + + + + K Sbjct: 103 ISTVCIGQAASMGAVLLAAGAEGKRYALPNAR------IMLHQPSGGFQGQAHDIEIHTK 156 Query: 154 SVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 + + + D++ V + R Sbjct: 157 EILR----------------IRERLNDIL-------VHHTGQGRERIEQDLDRDF---FM 190 Query: 214 TGAEAKKVGLIDVV 227 + EA+ L+D V Sbjct: 191 SAEEAQTYHLVDAV 204 >gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9303] gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9303] Length = 200 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + +A S + ++ Q + I++ + +K + Sbjct: 102 MGAFLLTAGTKGKRLALPHSRI----MIHQPLGGTNQRQASDIEIEAREILRIKDMLNHS 157 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +E+ + + ++ D Y + AEAK GLID Sbjct: 158 MAELTGQTFEKIEKDTDRDY-------------------------FLSAAEAKDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|219870832|ref|YP_002475207.1| Clp protease-like protein [Haemophilus parasuis SH0165] gi|219691036|gb|ACL32259.1| Clp protease-like protein [Haemophilus parasuis SH0165] Length = 655 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 65/187 (34%), Gaps = 36/187 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q+ + ++ + + + + SPGGS + G AI+ ++ K Sbjct: 21 EIGGWGISAQQFAKDLKNLGD---IKHIDLHIHSPGGSVFDGIAIYNLLKNHPASK--TV 75 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +I+ + ++ + ++ + + ++S Sbjct: 76 YIDGLAASMASVIAMLGDPVIMPKNAM------MMIH------------KPWGIQSGD-- 115 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + ++ D++D + + +E ++ + W T E + Sbjct: 116 ----------AEDMRKYADLLDKIENTTIPAYAEKTGKSPEELAEMLKEETWLTAEECVE 165 Query: 221 VGLIDVV 227 G D + Sbjct: 166 QGFADKL 172 >gi|148555105|ref|YP_001262687.1| peptidase S14, ClpP [Sphingomonas wittichii RW1] gi|148500295|gb|ABQ68549.1| peptidase S14, ClpP [Sphingomonas wittichii RW1] Length = 688 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 41/191 (21%) Query: 41 IAIRGQIEDSQELIER-----IERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 I I G + DS + ++ + DD L V ++SPGG G AI+ AI + + Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLISAGDDD----LDVRINSPGGYVMEGLAIYNAIIRERG 59 Query: 96 RK-PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V T + +AAS G +++ A IV A+ +L L + P+ G +I+ Sbjct: 60 KGRKVTTHIDGLAASMGSILAMAGEEIVMADNAL------LMIH---NPWDCACGDAIEL 110 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 +++ +D V + S++ + D + + D W Sbjct: 111 RRAADR---------------------LDQLRDQMVGIYSKATGLEADALIPMLDAETWM 149 Query: 214 TGAEAKKVGLI 224 T EA + I Sbjct: 150 TATEALALNFI 160 >gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaeromyxobacter sp. Fw109-5] gi|166201797|sp|A7HFV9|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaeromyxobacter sp. Fw109-5] Length = 204 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 44/197 (22%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + +I ++ + +D + + ++SPGGS +G AI+ +Q VK + Sbjct: 30 RIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGLAIYDTMQYVKPQ 89 Query: 97 KPVITEVHEMAAS-AGYLIS-CASNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V T AAS +L++ A+ A + + + + + + Sbjct: 90 --VSTICLGQAASMGAFLLAGGAAGKRFAVPNAR------IMIHQPMGGFQGQATDIDIQ 141 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + +KA+ + ++++ P ++ +D Sbjct: 142 AREILR--LKAKLN-------------------------DILAKHTKQPLERIEKDTDRD 174 Query: 212 IWTGA-EAKKVGLIDVV 227 + GA EAK+ GLID V Sbjct: 175 YFMGAGEAKEYGLIDEV 191 >gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT 9313] gi|67460518|sp|Q7V8M4|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313] Length = 200 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + +A S + ++ Q + I++ + +K + Sbjct: 102 MGAFLLTAGTKGKRLALPHSRI----MIHQPLGGTNQRQASDIEIEAREILRIKDMLNHS 157 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +E+ ++ + ++ D Y + AEAK GLID Sbjct: 158 MAELTGQSFEKIEKDTDRDY-------------------------FLSAAEAKDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|126652819|ref|ZP_01724964.1| YqeZ [Bacillus sp. B14905] gi|126590355|gb|EAZ84475.1| YqeZ [Bacillus sp. B14905] Length = 428 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 57 IERI---SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 +ER +++++A A+I+ + +PGG A I + R I +++ A SAG Sbjct: 35 LERAFNEAKENNAKAIILDIHTPGGFVNAASDIAMLMDATDIR--TIAFINKDAHSAGAF 92 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ ++ I +G+ V+ Sbjct: 93 LALHADEIYMVPNGTIGAAAVIDSAGNAADLKAN 126 >gi|15614960|ref|NP_243263.1| hypothetical protein BH2397 [Bacillus halodurans C-125] gi|14548276|sp|Q9KA93|TEPA_BACHD RecName: Full=Translocation-enhancing protein TepA gi|10175017|dbj|BAB06116.1| BH2397 [Bacillus halodurans C-125] Length = 256 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 65/226 (28%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I + GQIE + +I ++ ++ L++ L++ GG AG AI Sbjct: 55 ITVVGQIEGHMQLPPQNKTTKYEHIIPQLVAAEQNKKIEGLLIILNTVGGDVEAGLAIAE 114 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDK 147 + + KP +T V S G I+ A+N AET+ + +P + + Sbjct: 115 MVATMS--KPTVTLVLGGGHSIGVPIAVAANYSFIAETA------TMTIHPVRLTGLV-- 164 Query: 148 LGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL 207 +GV + + MQ+ V V V++ +I +K L Sbjct: 165 IGV------------------PQTFEYLDKMQERV-------VSFVTKHSHISEEKFKEL 199 Query: 208 SDGRIWT-------------GAEAKKVGLIDVVGGQEEVWQSLYAL 240 +++ G +A GLID VGG + Q L L Sbjct: 200 ----MFSKGNLTRDIGTNVIGTDAVTYGLIDEVGGIGKAMQKLTEL 241 >gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1 gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1 gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1 gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1 gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1 gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1 gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1 gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic Crystal Form gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic Crystal Form Length = 199 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K + Sbjct: 28 IIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPK- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + + + Sbjct: 87 -VSTICIGMAASMGAFLLAAGEKGKRYALPNSEV------MIHQPLGGAQGQA------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + ++++E P + +D + + Sbjct: 133 -----------------TEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKS 175 Query: 215 GAEAKKVGLIDVV 227 EA + GLID + Sbjct: 176 AEEALEYGLIDKI 188 >gi|148267495|ref|YP_001246438.1| peptidase S14, ClpP [Staphylococcus aureus subsp. aureus JH9] gi|150393549|ref|YP_001316224.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus JH1] gi|282927349|ref|ZP_06334967.1| peptidase S14, ClpP [Staphylococcus aureus A10102] gi|147740564|gb|ABQ48862.1| peptidase S14, ClpP [Staphylococcus aureus subsp. aureus JH9] gi|149946001|gb|ABR51937.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus JH1] gi|282590673|gb|EFB95749.1| peptidase S14, ClpP [Staphylococcus aureus A10102] Length = 257 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 132 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 133 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 160 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID + G E+ S+ Sbjct: 161 MLDAETWLTAEEALSFGLIDEILGANEITASISK 194 >gi|23501987|ref|NP_698114.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis 1330] gi|38257636|sp|Q8G0I4|CLPP_BRUSU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|23347937|gb|AAN30029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis 1330] Length = 209 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 94 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 95 PVSTLCMGQAASMGSLLLTAGATGHRYALPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + YD D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYDTIERTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 185 AQEALEFGLIDKVVEVRDV 203 >gi|17546430|ref|NP_519832.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia solanacearum GMI1000] gi|83745913|ref|ZP_00942970.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia solanacearum UW551] gi|207724193|ref|YP_002254591.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase clp) protein [Ralstonia solanacearum MolK2] gi|207743049|ref|YP_002259441.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase clp) protein [Ralstonia solanacearum IPO1609] gi|300691404|ref|YP_003752399.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Ralstonia solanacearum PSI07] gi|300703972|ref|YP_003745574.1| proteolytic subunit of clpa-clpp ATP-dependent serine protease [Ralstonia solanacearum CFBP2957] gi|22653696|sp|Q8XYP7|CLPP_RALSO RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|17428728|emb|CAD15413.1| probable atp-atp-dependent clp protease proteolytic subunit (endopeptidase clp). transmembrane protein [Ralstonia solanacearum GMI1000] gi|83727603|gb|EAP74724.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia solanacearum UW551] gi|206589403|emb|CAQ36365.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase clp) protein [Ralstonia solanacearum MolK2] gi|206594446|emb|CAQ61373.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase clp) protein [Ralstonia solanacearum IPO1609] gi|299066731|emb|CBJ37925.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Ralstonia solanacearum CMR15] gi|299071635|emb|CBJ42959.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Ralstonia solanacearum CFBP2957] gi|299078464|emb|CBJ51116.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Ralstonia solanacearum PSI07] Length = 217 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 72/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + ++ + + ++SPGGS AG A++ +Q VK Sbjct: 51 VIFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAMYDTMQFVKPD- 109 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S + + + + + Sbjct: 110 -VSTLCMGMAASMGAFLLAAGAKGKRYALPNSR------IMIHQPLGGARGQASDIEIQA 162 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V ++ R+ D Sbjct: 163 REILY----------------LRERLNTILSEVTGQPVDKIA--RDTDRDN--------F 196 Query: 213 WTGAEAKKVGLIDVV 227 +G +AK+ GLID V Sbjct: 197 MSGDQAKEYGLIDKV 211 >gi|308185908|ref|YP_003930039.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 [Pantoea vagans C9-1] gi|308056418|gb|ADO08590.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 [Pantoea vagans C9-1] Length = 207 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ ++ +K Sbjct: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV------MIHQPLGGYQGQASDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K Q M +++ +E ++ ++ R Sbjct: 154 REIL----------------KVKQRMNELM-----------AEHTGKTLEEIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + EA + GL+D + Sbjct: 187 FLSANEAVEYGLVDSI 202 >gi|291616549|ref|YP_003519291.1| ClpP [Pantoea ananatis LMG 20103] gi|291151579|gb|ADD76163.1| ClpP [Pantoea ananatis LMG 20103] gi|327392981|dbj|BAK10403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea ananatis AJ13355] Length = 218 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ ++ +K Sbjct: 53 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPD- 111 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 112 -VSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 164 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K Q M +++ +E ++ ++ R Sbjct: 165 REIL----------------KVKQRMNELM-----------AEHTGKSLEEIERDTERDR 197 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA + GL+D + Sbjct: 198 FLSASEAVEYGLVDSI 213 >gi|239815455|ref|YP_002944365.1| peptidase S14 ClpP [Variovorax paradoxus S110] gi|239802032|gb|ACS19099.1| peptidase S14 ClpP [Variovorax paradoxus S110] Length = 227 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 33/161 (20%) Query: 65 SATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAA 124 + AL + ++SPGGS + G AI+ I++ K I V +AAS +I+ A + + A Sbjct: 43 AVKALDIYINSPGGSVFEGLAIYNQIKRFDGEK--IVHVDGIAASIASVIAMAGDEVRIA 100 Query: 125 ETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDS 184 G + + + +++ ++DV+ Sbjct: 101 AN------GTIMIH------------DPWGMAMGTAADM-----RKQAESLDKVRDVLLE 137 Query: 185 SYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 +Y + W EA + G Sbjct: 138 NY-------VARTGGKREDISSWMTAETWMNADEAVERGFA 171 >gi|332284416|ref|YP_004416327.1| putative nodulation efficiency protein D [Pusillimonas sp. T7-7] gi|330428369|gb|AEC19703.1| putative nodulation efficiency protein D [Pusillimonas sp. T7-7] Length = 465 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 84/225 (37%), Gaps = 32/225 (14%) Query: 30 HVEDNSPHVARIAIRGQI--EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 +P V + + G I S + +++ + S A+I L +PGG + AI Sbjct: 27 KANAQAPKVTVLQVDGIISPATSDFITRGLQQAVENGSTLAVI-ELDTPGGLDSSMRAII 85 Query: 88 RAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVA-AETSLVG-----SIGVLFQY 138 R I + + PV + V AASAG I ++ I A S +G SIG Sbjct: 86 RQI--LASPIPVASFVSPSGARAASAGTFI-LYASHIAAMTPASNLGAASPVSIG--MPG 140 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 + D G + K S S+ A ++ + RN Sbjct: 141 AGTETQDDDKG-KNEGNKQKSNADTLS--SKATNDAAAYIRSLAQ----------LRGRN 187 Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVV-GGQEEVWQSLYALGV 242 + + VL + R + EA K G++DVV G ++ + V Sbjct: 188 ADFAEQAVL-EARSMSAQEALKAGVVDVVAGNMAQLLDQIDGRTV 231 >gi|154148860|ref|YP_001405639.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter hominis ATCC BAA-381] gi|166201810|sp|A7HZE8|CLPP_CAMHC RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|153804869|gb|ABS51876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter hominis ATCC BAA-381] Length = 195 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 28 IVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPGGVVTSGFSIYDTMNYIKPA- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC A + + + +P G + Sbjct: 87 -VSTICIGQAASMGAFLLSCGEKGKRYALPNAR------IMIH---QPLGGAQGQATDI- 135 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ ++ ++E+ K +D + + Sbjct: 136 -------------EITTKEILRIKATLNKI-------LAENSGQKLSKIEKDTDRDFYMS 175 Query: 215 GAEAKKVGLIDVV 227 EA K GLID V Sbjct: 176 AQEAVKYGLIDKV 188 >gi|149882820|ref|YP_001294799.1| Clp protease [Microbacterium phage Min1] gi|148763451|gb|ABR10469.1| Clp protease [Microbacterium phage Min1] Length = 399 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 44/202 (21%) Query: 32 EDNSPHVARIAIRGQIEDS-------QELIERIERISRDDSATALIVSLSSPGGSAYAGE 84 + ++P A + I +I +S + L++ I + + V ++SPGG+A+ G Sbjct: 23 DGDAPSTADVYIYDEIGESWWGGIAPKALVDEITAL----DVAEMTVHINSPGGAAWDGI 78 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I A++ K + V V +AASA +I+ + I G Sbjct: 79 TIMNALRAHKAQ--VHVVVDGLAASAASVIAMGGDTITMNR-------GAQMMIHDASGG 129 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 + +++V + K + D + +Y + ++ Sbjct: 130 VWGNAAEVEAVATILHK----------------LSDSIADTY-------AARTGGTREQW 166 Query: 205 LVLSDGRIW-TGAEAKKVGLID 225 + W T EA GL D Sbjct: 167 RAVMKDEAWYTAEEAVAAGLAD 188 >gi|167032211|ref|YP_001667442.1| peptidase S14 ClpP [Pseudomonas putida GB-1] gi|166858699|gb|ABY97106.1| peptidase S14 ClpP [Pseudomonas putida GB-1] Length = 383 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 44/214 (20%) Query: 22 VVYFSWSSHVEDNSPHVARIAIRGQIED----SQELIERIERISRDDSATALIVSLSSPG 77 + + + V D P+ I I G+I + + + ++ I DD + + V+ ++ G Sbjct: 27 ISAATKAEGVADAEPNPIEIYIYGEIGGWGITANQFLRDLKAI--DDGVSPVHVAFNTSG 84 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 G + G AI A++++ R + +AASAG + C ++ +VAA T++ L Sbjct: 85 GDLFEGVAIHNALRRLGER--CTGRIDALAASAGSVAVCGAHRVVAASTAI------LMI 136 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRL-VS 194 + +P++ E + + ++ + DV+D ++ + + Sbjct: 137 H--------------------------NPYTWIEGDAEELRRVADVLDQAFEVIIAAYKA 170 Query: 195 ESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +S I + L + W T EA +GL+D + Sbjct: 171 KSPEIDEAELRRLVNDESWLTAQEALDLGLVDEI 204 >gi|326791245|ref|YP_004309066.1| peptidase S14 ClpP [Clostridium lentocellum DSM 5427] gi|326542009|gb|ADZ83868.1| peptidase S14 ClpP [Clostridium lentocellum DSM 5427] Length = 279 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 43/208 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + D +++ L++ GG AG A+ I V KP ++ V A S Sbjct: 106 EHIIPQMVGLCDDPKIKGILIILNTVGGDVEAGLALAELIASV--NKPTVSLVLGGAHSI 163 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ AS+ T+ + +P V+ +GV Sbjct: 164 GVPIAVASDYSFITPTA------TMTIHP-VRMNGTVIGVQQTF---------------- 200 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-------TLVLSD--GRIWTGAEAKKV 221 + MQ+ + V V+ + +I + L+ G I G EA Sbjct: 201 --EFFDQMQERI-------VAFVARNSHIEETRFKELMLSVGKLARDVGTILVGQEAVDE 251 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKI 249 +ID +GG E L+ L + ++ Sbjct: 252 KIIDELGGLTEAMSKLHQLIAESEANEL 279 >gi|239831859|ref|ZP_04680188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum intermedium LMG 3301] gi|239824126|gb|EEQ95694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum intermedium LMG 3301] Length = 230 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 58 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 115 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 116 PVSTLCMGQAASMGSLLLTAGATGQRYALPNAR------IMVHQ---------------- 153 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + Y+ D + T Sbjct: 154 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYETIERTLDRDHFMT 205 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 206 AQEALEFGLIDKVVEARDV 224 >gi|148558952|ref|YP_001259031.1| ATP-dependent Clp protease proteolytic subunit [Brucella ovis ATCC 25840] gi|297248424|ref|ZP_06932142.1| ATP-dependent Clp protease, protease subunit [Brucella abortus bv. 5 str. B3196] gi|148370209|gb|ABQ60188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella ovis ATCC 25840] gi|297175593|gb|EFH34940.1| ATP-dependent Clp protease, protease subunit [Brucella abortus bv. 5 str. B3196] Length = 228 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 56 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 113 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 114 PVSTLCMGQAASMGSLLLTAGATGHRYALPNAR------IMVHQ---------------- 151 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + YD D + T Sbjct: 152 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYDTIERTLDRDHFMT 203 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 204 AQEALEFGLIDKVVEARDV 222 >gi|329770311|ref|ZP_08261696.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis M325] gi|328836764|gb|EGF86416.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis M325] Length = 215 Score = 59.0 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 37/186 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ + DS + ++SPGGS AG AI+ +Q +K V+T MAAS Sbjct: 41 ANSITSQLLFLEAQDSEKDIYFYINSPGGSVTAGFAIYDTMQHIKCD--VVTICMGMAAS 98 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 +L++ G+IG + P + + + P Sbjct: 99 MGAFLLAA-------------GTIGKRYALPNAEVMIHQ------------------PLG 127 Query: 169 EVNPK--AVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLID 225 + +++ + + +++++ ++ + + EA + GL+D Sbjct: 128 GAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLSAEEACEYGLVD 187 Query: 226 VVGGQE 231 V E Sbjct: 188 KVMYPE 193 >gi|257414294|ref|ZP_04745868.2| Clp protease [Roseburia intestinalis L1-82] gi|257200551|gb|EEU98835.1| Clp protease [Roseburia intestinalis L1-82] gi|291538992|emb|CBL12103.1| Protease subunit of ATP-dependent Clp proteases [Roseburia intestinalis XB6B4] Length = 252 Score = 59.0 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 87/224 (38%), Gaps = 49/224 (21%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++ + I G+IE + ++ ++ + + L++ L++ GG + Sbjct: 56 KNKISLLTIIGEIEGHDCLPATTKTTKYEHVLPKLAELEDNPDTEGLLLLLNTVGGDVES 115 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G AI I ++ KP ++ V + S G ++ +++ + G + +P Sbjct: 116 GLAIAEMIASIR--KPTVSLVLGGSHSIGVPLAVSTDYSFIVPS------GTMVIHP--- 164 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + +S + + P + MQD + F+ S++ + Sbjct: 165 -----VRMSGTVIGAKPTYDYF-----------KQMQDRI----VHFISTHSKASEKRLE 204 Query: 203 KTLVLSD------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + ++ + G I G EA + GLI+ VGG + + L+ + Sbjct: 205 ELMMNTGILTKDLGTILVGKEAVEEGLINEVGGISDAFSRLHQM 248 >gi|163941483|ref|YP_001646367.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4] gi|229012979|ref|ZP_04170144.1| Translocation-enhancing protein tepA [Bacillus mycoides DSM 2048] gi|229061399|ref|ZP_04198744.1| Translocation-enhancing protein tepA [Bacillus cereus AH603] gi|229134603|ref|ZP_04263413.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST196] gi|229168535|ref|ZP_04296258.1| Translocation-enhancing protein tepA [Bacillus cereus AH621] gi|163863680|gb|ABY44739.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4] gi|228614941|gb|EEK72043.1| Translocation-enhancing protein tepA [Bacillus cereus AH621] gi|228648864|gb|EEL04889.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST196] gi|228717822|gb|EEL69470.1| Translocation-enhancing protein tepA [Bacillus cereus AH603] gi|228748233|gb|EEL98093.1| Translocation-enhancing protein tepA [Bacillus mycoides DSM 2048] Length = 249 Score = 59.0 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDGVGGIGSALRKLNEL 234 >gi|258427137|ref|ZP_05688059.1| scaffolding protease [Staphylococcus aureus A9299] gi|257849915|gb|EEV73874.1| scaffolding protease [Staphylococcus aureus A9299] Length = 257 Score = 59.0 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 56/215 (26%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVS 151 + + V +AAS +I+ + + I + S L + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFKPKNSF------LMIH------------N 116 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS------ESRNIPYDKTL 205 + N + ++ D++D + VS +++N+ ++ Sbjct: 117 SWVMTVG------------NAEELRKTADLLDKT-----DAVSNSAYLDKAKNLDQEQLK 159 Query: 206 VLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID V G E+ S+ Sbjct: 160 QMLDAETWLTAEEALSFGLIDEVLGANEIAASISK 194 >gi|62290024|ref|YP_221817.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus bv. 1 str. 9-941] gi|82699951|ref|YP_414525.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis biovar Abortus 2308] gi|161619061|ref|YP_001592948.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis ATCC 23365] gi|163843378|ref|YP_001627782.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis ATCC 23445] gi|189024264|ref|YP_001935032.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus S19] gi|254689336|ref|ZP_05152590.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus bv. 6 str. 870] gi|254693820|ref|ZP_05155648.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus bv. 3 str. Tulya] gi|254697469|ref|ZP_05159297.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254701854|ref|ZP_05163682.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis bv. 5 str. 513] gi|254706705|ref|ZP_05168533.1| ATP-dependent Clp protease proteolytic subunit [Brucella pinnipedialis M163/99/10] gi|254710187|ref|ZP_05171998.1| ATP-dependent Clp protease proteolytic subunit [Brucella pinnipedialis B2/94] gi|254714185|ref|ZP_05175996.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti M644/93/1] gi|254717620|ref|ZP_05179431.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti M13/05/1] gi|254719174|ref|ZP_05180985.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. 83/13] gi|254730366|ref|ZP_05188944.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus bv. 4 str. 292] gi|256031681|ref|ZP_05445295.1| ATP-dependent Clp protease proteolytic subunit [Brucella pinnipedialis M292/94/1] gi|256061193|ref|ZP_05451345.1| ATP-dependent Clp protease proteolytic subunit [Brucella neotomae 5K33] gi|256159837|ref|ZP_05457570.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti M490/95/1] gi|256255083|ref|ZP_05460619.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti B1/94] gi|256257582|ref|ZP_05463118.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus bv. 9 str. C68] gi|260168815|ref|ZP_05755626.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. F5/99] gi|260546576|ref|ZP_05822315.1| clp protease [Brucella abortus NCTC 8038] gi|260566355|ref|ZP_05836825.1| clp protease [Brucella suis bv. 4 str. 40] gi|260754852|ref|ZP_05867200.1| endopeptidase Clp [Brucella abortus bv. 6 str. 870] gi|260758069|ref|ZP_05870417.1| endopeptidase Clp [Brucella abortus bv. 4 str. 292] gi|260761893|ref|ZP_05874236.1| endopeptidase Clp [Brucella abortus bv. 2 str. 86/8/59] gi|260883864|ref|ZP_05895478.1| ClpP [Brucella abortus bv. 9 str. C68] gi|261214103|ref|ZP_05928384.1| endopeptidase Clp [Brucella abortus bv. 3 str. Tulya] gi|261219456|ref|ZP_05933737.1| ATP-dependent Clp protease [Brucella ceti M13/05/1] gi|261222276|ref|ZP_05936557.1| ClpP [Brucella ceti B1/94] gi|261314167|ref|ZP_05953364.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261317744|ref|ZP_05956941.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261321952|ref|ZP_05961149.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261325200|ref|ZP_05964397.1| ClpP [Brucella neotomae 5K33] gi|261752415|ref|ZP_05996124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis bv. 5 str. 513] gi|261758300|ref|ZP_06002009.1| clp protease [Brucella sp. F5/99] gi|265984170|ref|ZP_06096905.1| conserved hypothetical protein [Brucella sp. 83/13] gi|265988775|ref|ZP_06101332.1| ClpP [Brucella pinnipedialis M292/94/1] gi|265998240|ref|ZP_06110797.1| ClpP [Brucella ceti M490/95/1] gi|294852448|ref|ZP_06793121.1| Clp protease [Brucella sp. NVSL 07-0026] gi|306838166|ref|ZP_07471022.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. NF 2653] gi|306841836|ref|ZP_07474518.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO2] gi|306843974|ref|ZP_07476569.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO1] gi|18203228|sp|Q9L7X6|CLPP_BRUAB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|90101403|sp|Q2YPX1|CLPP_BRUA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082449|sp|A9M5C2|CLPP_BRUC2 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|189082450|sp|B0CGR1|CLPP_BRUSI RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706442|sp|B2S5W1|CLPP_BRUA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|6942106|gb|AAF32318.1|AF218420_1 ClpP [Brucella abortus] gi|62196156|gb|AAX74456.1| ClpP, ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella abortus bv. 1 str. 9-941] gi|82616052|emb|CAJ11088.1| Clp protease [Brucella melitensis biovar Abortus 2308] gi|161335872|gb|ABX62177.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis ATCC 23365] gi|163674101|gb|ABY38212.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis ATCC 23445] gi|189019836|gb|ACD72558.1| Clp protease [Brucella abortus S19] gi|260095626|gb|EEW79503.1| clp protease [Brucella abortus NCTC 8038] gi|260155873|gb|EEW90953.1| clp protease [Brucella suis bv. 4 str. 40] gi|260668387|gb|EEX55327.1| endopeptidase Clp [Brucella abortus bv. 4 str. 292] gi|260672325|gb|EEX59146.1| endopeptidase Clp [Brucella abortus bv. 2 str. 86/8/59] gi|260674960|gb|EEX61781.1| endopeptidase Clp [Brucella abortus bv. 6 str. 870] gi|260873392|gb|EEX80461.1| ClpP [Brucella abortus bv. 9 str. C68] gi|260915710|gb|EEX82571.1| endopeptidase Clp [Brucella abortus bv. 3 str. Tulya] gi|260920860|gb|EEX87513.1| ClpP [Brucella ceti B1/94] gi|260924545|gb|EEX91113.1| ATP-dependent Clp protease [Brucella ceti M13/05/1] gi|261294642|gb|EEX98138.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261296967|gb|EEY00464.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261301180|gb|EEY04677.1| ClpP [Brucella neotomae 5K33] gi|261303193|gb|EEY06690.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261738284|gb|EEY26280.1| clp protease [Brucella sp. F5/99] gi|261742168|gb|EEY30094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis bv. 5 str. 513] gi|262552708|gb|EEZ08698.1| ClpP [Brucella ceti M490/95/1] gi|264660972|gb|EEZ31233.1| ClpP [Brucella pinnipedialis M292/94/1] gi|264662762|gb|EEZ33023.1| conserved hypothetical protein [Brucella sp. 83/13] gi|294821037|gb|EFG38036.1| Clp protease [Brucella sp. NVSL 07-0026] gi|306275729|gb|EFM57453.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO1] gi|306288063|gb|EFM59460.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO2] gi|306406756|gb|EFM62979.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. NF 2653] Length = 209 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 94 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 95 PVSTLCMGQAASMGSLLLTAGATGHRYALPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + YD D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYDTIERTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 185 AQEALEFGLIDKVVEARDV 203 >gi|257865163|ref|ZP_05644816.1| peptidase S14 [Enterococcus casseliflavus EC30] gi|257871487|ref|ZP_05651140.1| peptidase S14 [Enterococcus casseliflavus EC10] gi|257874785|ref|ZP_05654438.1| peptidase S14 [Enterococcus casseliflavus EC20] gi|325571575|ref|ZP_08147075.1| ATP-dependent Clp protease, protease subunit [Enterococcus casseliflavus ATCC 12755] gi|257799097|gb|EEV28149.1| peptidase S14 [Enterococcus casseliflavus EC30] gi|257805651|gb|EEV34473.1| peptidase S14 [Enterococcus casseliflavus EC10] gi|257808951|gb|EEV37771.1| peptidase S14 [Enterococcus casseliflavus EC20] gi|325156051|gb|EGC68247.1| ATP-dependent Clp protease, protease subunit [Enterococcus casseliflavus ATCC 12755] Length = 196 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ D + +I ++ + DS + + ++SPGGS AG AIF + +K Sbjct: 29 IIMLSGQVTDDLANSIIAQLLFLDAQDSEKDIYLYINSPGGSVTAGLAIFDTMNFIKAD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T V MAAS G + A A + + + + ++ ++ Sbjct: 88 -VQTIVMGMAASMGSFLLTAGEKGKRFALPNAE------IMIHQPLGGAQGQATEIEIAA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + ++ + + ++ + ++ R+ D Sbjct: 141 RHILAT----------------RERLNKILSERTGQPIEVIE--RDTDRDN--------F 174 Query: 213 WTGAEAKKVGLIDVV 227 T EAK GLID + Sbjct: 175 MTAQEAKDYGLIDEI 189 >gi|116785036|gb|ABK23566.1| unknown [Picea sitchensis] Length = 243 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G IED ++ ++ + ++ A + + ++SPGG AG AI+ +Q +++ Sbjct: 59 IICINGVIEDDTAAVVVAQLLFLESENPAKPINLYINSPGGVVTAGLAIYDTMQYIRS-- 116 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T AAS L++ + G P + + + Sbjct: 117 PVSTFCMGQAASMGSLLLAAGAK-------------GERRSLPNARIMIHQ----PSGGA 159 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWTG 215 S + K + + +D ++S Y ++ DK + + Sbjct: 160 SGQASDI-----AIQAKEILLTRDRLNSLY-------AKHTGQSIDKIEKCMERDMFMSP 207 Query: 216 AEAKKVGLIDVV 227 EAK+ GL+D V Sbjct: 208 EEAKEFGLVDTV 219 >gi|78780133|ref|YP_398245.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prochlorococcus marinus str. MIT 9312] gi|115311352|sp|Q317Y6|CLPP4_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 4; AltName: Full=Endopeptidase Clp 4 gi|78713632|gb|ABB50809.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prochlorococcus marinus str. MIT 9312] Length = 219 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I D S L+ ++ + +D + + ++SPGGS AG AI+ +Q++ Sbjct: 56 IIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMAIYDTMQQISPD- 114 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L+S + +A S + + Sbjct: 115 -VVTICFGVAASMGAFLLSGGAKGKRLALPNSR------IMIH----------------- 150 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSDG 210 + Q ++ + + F++ L++E P +K ++ Sbjct: 151 ------------QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTER 198 Query: 211 RIW-TGAEAKKVGLIDVV 227 + + +EA + GLID V Sbjct: 199 DYFLSPSEAVEYGLIDKV 216 >gi|148259928|ref|YP_001234055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidiphilium cryptum JF-5] gi|146401609|gb|ABQ30136.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidiphilium cryptum JF-5] Length = 211 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 41 IIFLTGPVYDQVGSLIAAQLLFLESENPSKEIAFYINSPGGVVSAGLAIYDTMQYIKS-- 98 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ A A S I V + + + + + Sbjct: 99 PVSTVCIGQAASMGSLLLAAGEKGKRFALPNSR---IMVHQPSGGAQGQASDIEIQAREI 155 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWT 214 + ++ ++ Y + L R + Sbjct: 156 LT--------------------LRRRLNDIY-------VTHTGQSLEAIEQALERDRFMS 188 Query: 215 GAEAKKVGLIDVV 227 EA++ GL+D V Sbjct: 189 ANEAQEFGLVDEV 201 >gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter sp. X514] gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter ethanolicus CCSD1] gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter sp. X561] gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter sp. X513] gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226706551|sp|B0KBA4|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706552|sp|B0K533|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter sp. X514] gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter ethanolicus CCSD1] gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter sp. X561] gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter sp. X513] gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 195 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G+ I D+ +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGFAIYDTMQYIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T MAAS A +L++ + A S + + + + Sbjct: 88 --VVTLCVGMAASMAAFLLAAGAKGKRFALPNSE------IMIHQPLGGMQGQ------- 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ +K ++ + + ++D +D ++E+ P +K ++ + Sbjct: 133 --ATDIK--------IHAERILKLRDKLDKI-------LAENTGQPIEKIKADTERDFFM 175 Query: 214 TGAEAKKVGLIDVV 227 +AK G+ID V Sbjct: 176 DAEDAKAYGIIDEV 189 >gi|329894939|ref|ZP_08270738.1| ATP-dependent Clp protease proteolytic subunit [gamma proteobacterium IMCC3088] gi|328922668|gb|EGG30003.1| ATP-dependent Clp protease proteolytic subunit [gamma proteobacterium IMCC3088] Length = 200 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ ++ +K Sbjct: 35 VIFVVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGLAIYDTMKFIKPD- 93 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + + + P + I+ Sbjct: 94 -VTTTCMGQAASMGAFLLSAGAKGKRYCLPNART-----MIHQPSGGAQGQATDIDIQ-- 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWT 214 K + ++++ ++ RL++E P D ++ R Sbjct: 146 ----------------AKEILIIRERLN-------RLMAEHTGQPIDVIERDTERDRFMN 182 Query: 215 GAEAKKVGLIDVV 227 ++K+ GL+D V Sbjct: 183 AEQSKEYGLVDEV 195 >gi|302869360|ref|YP_003837997.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] gi|315504165|ref|YP_004083052.1| endopeptidase clp [Micromonospora sp. L5] gi|302572219|gb|ADL48421.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029] gi|315410784|gb|ADU08901.1| Endopeptidase Clp [Micromonospora sp. L5] Length = 213 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ ++ +D + + ++SPGGS Y+G AI+ +Q + N V T MAAS Sbjct: 50 ANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYDTMQYIDND--VSTVAMGMAAS 107 Query: 110 AGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ CA A + + + P Sbjct: 108 MGQLLLCAGTKGKRYALPHAR------IMMHQ-------------------PSGGLGGTA 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 S++ +A QM+ + F V+ + SD R +T EA G ID Sbjct: 143 SDIAIQAEQMLY-----TKRMFQERVAFHTGQSQAQIEADSDRDRWFTAQEAMDYGFIDK 197 Query: 227 V 227 V Sbjct: 198 V 198 >gi|119493580|ref|ZP_01624244.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC 8106] gi|119452570|gb|EAW33753.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC 8106] Length = 198 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 73/181 (40%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + + DD + + ++SPGGS AG AI+ +Q +K+ V+T +AAS Sbjct: 44 ANRIVASMLYLDSDDPNKPIYLYINSPGGSVTAGMAIYDTMQYIKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A + + + + Sbjct: 102 MGAFLLASGTPGKRLALPHAR------IMIHQPMGG------------TRGQASDI---- 139 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 E+ + + ++ +++S ++E + +K +D + + EA++ GL+D Sbjct: 140 -EIEAREILRIRSLLNSI-------LAERAHQSIEKVEKDTDRDYFLSAEEAREYGLVDQ 191 Query: 227 V 227 V Sbjct: 192 V 192 >gi|119492479|ref|XP_001263605.1| Clp protease, putative [Neosartorya fischeri NRRL 181] gi|119411765|gb|EAW21708.1| Clp protease, putative [Neosartorya fischeri NRRL 181] Length = 175 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 31/181 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S ++ ++ + D+ + + ++SPGGS AG AI+ + + + PV T AAS Sbjct: 2 SASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIAS--PVSTICVGQAAS 59 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ C N S SI + S + S Sbjct: 60 MGSLLLCGGNPGKRYCLPHS---SI---MIHQ----------------PSGGYFGQASDI 97 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKKVGLIDV 226 ++ K + ++ ++ Y R ++ + + ++ L + + GA+ A ++G++D Sbjct: 98 -AIHAKEILRVRSQLNKIYQ---RHLTGKKVLSLEEIEKLMERDYFMGAQEALEMGIVDE 153 Query: 227 V 227 + Sbjct: 154 I 154 >gi|256821432|ref|YP_003145395.1| hypothetical protein Kkor_0206 [Kangiella koreensis DSM 16069] gi|256794971|gb|ACV25627.1| protein of unknown function DUF107 [Kangiella koreensis DSM 16069] Length = 476 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 21/231 (9%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATAL 69 Y+ LS + L S ++ ++ + G + + L+E IE + D + Sbjct: 6 YIALSFLLLCFSAQQLHSAETNSGKRAMQLTLDGSVNPATAHFLVENIEEAAAQD-YQLI 64 Query: 70 IVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVAAET 126 I+ +++PGG A I RAI + + PV T V AASAG I AS++ A Sbjct: 65 IIKMNTPGGLDLAMRDIIRAI--LSSPVPVATYVYPPGSRAASAGTYILYASHVSAMAPA 122 Query: 127 SLVG-----SIGVLFQ--YPYVKPFLDKLGVSIKSVKSSPMKAEP--SPFSEVNPKAVQM 177 + +G SIG + P + + S K +P SP M Sbjct: 123 TNLGAATPVSIGGMPSPDQPNQSEQNKEP--NQDGADSEQSKDQPAQSPSQSAPSNKSAM 180 Query: 178 MQDVVDSSYHWFVRLVS-ESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + V++ + + L RNI + K + +G + +EA ++G+ID++ Sbjct: 181 EKKVINDAEAYLRSLAHYHGRNIDWVK-NAVREGESLSSSEALEIGVIDLI 230 >gi|298491711|ref|YP_003721888.1| endopeptidase Clp ['Nostoc azollae' 0708] gi|298233629|gb|ADI64765.1| Endopeptidase Clp ['Nostoc azollae' 0708] Length = 197 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++ + DD + + ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLTEEVDDGIANAIVAYFLYLDSDDQTKPIYLYINSPGGSVTAGMAIYDTMQYIKSE- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ + +A S + + Sbjct: 91 -VVTICVGLAASMGSFLLATGTQGKRLALPHSR------IMIH------------QPSGG 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 + + + ++ ++ Y +++ K D + + Sbjct: 132 TRGQATDIQ-----IEAQEILRIRSQLNQIY-------ADNTGQALAKIEKDMDRDFFMS 179 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 180 AQEAKEYGLIDRV 192 >gi|253990891|ref|YP_003042247.1| ATP-dependent Clp protease proteolytic subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782341|emb|CAQ85505.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease, heat shock protein F21.5 [Photorhabdus asymbiotica] Length = 207 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 72/201 (35%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGAEGKRFCLPNSRV------MIHQPLGGFQGQASDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + +K + S + ++ ++ ++ R Sbjct: 154 QEI----LKVKGRMNSLM-----------------------AKHTGKSLEEIEKDTERDR 186 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + +EA + GL+D + + Sbjct: 187 FLSASEAVEYGLVDKIFTHRD 207 >gi|224068558|ref|XP_002302770.1| predicted protein [Populus trichocarpa] gi|222844496|gb|EEE82043.1| predicted protein [Populus trichocarpa] Length = 300 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G ++D + ++ ++ + D +++ ++SPGGS AG AIF ++ ++ Sbjct: 122 IIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPD- 180 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L+S + + S + + + + + Sbjct: 181 -VSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR------IMIHQPLGGAQGGQSDIDIQA 233 Query: 153 KSVKSSPMKAEPSPFSEV-NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + KA + + ++++ + D Y Sbjct: 234 NEML--HHKANLNGYLAYHTGQSLEKINQDTDRDY------------------------- 266 Query: 212 IWTGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 267 FMSAKEAKDYGLIDGV 282 >gi|66395603|ref|YP_239937.1| ORF015 [Staphylococcus phage 3A] gi|62635949|gb|AAX91060.1| ORF015 [Staphylococcus phage 3A] Length = 257 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 132 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 133 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 160 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID + G E+ S+ Sbjct: 161 MLDAETWLTAEEALSFGLIDEILGANEITASISK 194 >gi|255323211|ref|ZP_05364346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter showae RM3277] gi|255299734|gb|EET79016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter showae RM3277] Length = 196 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+IED + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 30 IIMLSGEIEDGMASAIVAQMLFLEAEDPDKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 89 -VCTICIGQAASMGAFLLSCGAQGKRYALPNSR------IMIHQPLGGA----------- 130 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + M++++++ ++++ K +D + + Sbjct: 131 -RGQATDI-----EIQAKEILRMKEILNAI-------LAKNTGQKLAKIQKDTDRDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 AEAK+ GLID V Sbjct: 178 SAEAKEYGLIDKV 190 >gi|298674034|ref|YP_003725784.1| hypothetical protein Metev_0056 [Methanohalobium evestigatum Z-7303] gi|298287022|gb|ADI72988.1| protein of unknown function DUF107 [Methanohalobium evestigatum Z-7303] Length = 434 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 8 IKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSA 66 I+ L +++L S V + I I S +L+ ++ D++ Sbjct: 3 IRPNTYFLIIISLFFFIVMMSPCAIAQEEKVLVVEISDSITSASDDLVTNAISVAEDENY 62 Query: 67 TALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASNIIVA 123 A++++L++PGG I +I+ PVI V A SAG +I +++I Sbjct: 63 DAIVLTLNTPGGKLSETFNIIESIE--STNVPVIGYVYPEGTKAWSAGTIILISTDIAAM 120 Query: 124 AETSLVGS 131 A S++GS Sbjct: 121 APFSVIGS 128 >gi|118431752|ref|NP_148417.2| serine protease [Aeropyrum pernix K1] gi|116063074|dbj|BAA81162.2| serine protease [Aeropyrum pernix K1] Length = 503 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%) Query: 21 TVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGG 78 + +S+ P I I G I+++ L + IER +++ LIV L++PGG Sbjct: 72 FGIMPDATSYERVVGPKALIIRIEGTIDNAMMDYLKQSIERAEEENAV--LIVELNTPGG 129 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEV-HEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 A + +I K + PV+ V + A SAG +I +++I +++GS+ + Sbjct: 130 FVDAATEMVVSISKAR--IPVVGYVVEKWAESAGTMILMSTHIAAMQPGTIIGSVQPIA 186 >gi|254361891|ref|ZP_04978025.1| S14 family bacteriophage protease [Mannheimia haemolytica PHL213] gi|153093430|gb|EDN74421.1| S14 family bacteriophage protease [Mannheimia haemolytica PHL213] Length = 653 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 +++ + A I+I +I +Q+ + ++ + + + + + SPGG + G A Sbjct: 6 NIQAKANDTAEISIFDEIGFWGVTAQQFAKDLKALGNN--LKQINLHIHSPGGDVFDGIA 63 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++ K + +AAS +I+ A + I+ E ++ Sbjct: 64 IYNLLKNHPANK--TVYIDGLAASMASVIAMAGDEIIMPENAM 104 >gi|194366275|ref|YP_002028885.1| peptidase S14 ClpP [Stenotrophomonas maltophilia R551-3] gi|194349079|gb|ACF52202.1| peptidase S14 ClpP [Stenotrophomonas maltophilia R551-3] Length = 280 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 39/186 (20%) Query: 44 RGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 G ++ + + I D ++V+++SPGG + G AI+ +++ + R V +V Sbjct: 55 EGTGVTAKRISAALRAIGDKD----VVVNINSPGGDFFEGVAIYNLLREHQGR--VTVQV 108 Query: 104 HEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 +AASA +I+ A + I+ + S L + + +V Sbjct: 109 MGLAASAASVIAMAGDEILMGDGSF------LMIH------------NAWAVAIGNRHDM 150 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR-NIPYDKTLVLSDGRIWTG-AEAKKV 221 + P M V +R + + + D W G A+A + Sbjct: 151 ADAAKLLEPFDTAM-------------AKVYAARSGVTEAEAARMMDEETWIGAAQAVED 197 Query: 222 GLIDVV 227 G D + Sbjct: 198 GFADGL 203 >gi|226310010|ref|YP_002769904.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus brevis NBRC 100599] gi|226092958|dbj|BAH41400.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus brevis NBRC 100599] Length = 193 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ +D + + ++SPGGS AG AI ++ V Sbjct: 29 IIFLGSAIDDQVANAVVAQLLFLAAEDPKKDIHLYINSPGGSVTAGMAIIDTMKFVAPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS L+ + A + V + + Sbjct: 88 -VSTICTGMAASMGAMLLVAGAPGKRYALPNAEV------MLHQPWGGSQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ D + H ++SE ++ +D + T Sbjct: 134 -----------------SDIKIAADRIMRHRHMLYTIISERTGKTVEQIEKDADRDYFLT 176 Query: 215 GAEAKKVGLIDVV 227 AEA + GLID V Sbjct: 177 AAEALEYGLIDKV 189 >gi|167769170|ref|ZP_02441223.1| hypothetical protein ANACOL_00493 [Anaerotruncus colihominis DSM 17241] gi|167668810|gb|EDS12940.1| hypothetical protein ANACOL_00493 [Anaerotruncus colihominis DSM 17241] Length = 240 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 37/196 (18%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + +D L+V L++ GG AG AI + ++ KP ++ V S Sbjct: 70 EHVIPQLLAVEQDPEIEGLVVILNTVGGDVEAGLAIAELLSGMR--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ ++ ++ + +P L LGV Sbjct: 128 GVPLAVSARRSFIVPSA------TMTVHPVRMNGLV-LGV-------------------- 160 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVS-----ESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 P+ + + + FV S R + +K ++ D G + G A GLI Sbjct: 161 -PQTLSYFDRMQERIVK-FVTDNSRISPERFRQLMMNKDELVMDVGTVLDGQAAVDEGLI 218 Query: 225 DVVGGQEEVWQSLYAL 240 D +GG +V +LY + Sbjct: 219 DSLGGVSDVIAALYEM 234 >gi|143581|gb|AAA22783.1| ORF X [Bacillus subtilis] Length = 244 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 74/199 (37%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 67 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 124 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AETS L G IGV + Y+ +++ V + S+ Sbjct: 125 GVPIAVSCDYSYIAETSTVTIHPVRLTGLVIGVPQTFEYLDKMQERV-VKFVTSHSN--- 180 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + + F L+ N+ D + G +A K Sbjct: 181 --------ITEE--------------KFKELMFSKGNLTRDIGTNV------VGKDAVKY 212 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID GG + L L Sbjct: 213 GLIDHAGGVGQAINKLNEL 231 >gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurihydrogenibium azorense Az-Fu1] gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurihydrogenibium azorense Az-Fu1] Length = 202 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 44/197 (22%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + +D + + ++SPGG AG AI+ + +K Sbjct: 33 RIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPGGVVTAGFAIYDTMNYIKPD 92 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V+T AAS +L+S + + + + + + + + Sbjct: 93 --VVTICIGQAASMGAFLLSAGAKGKRYSLPNAR------IMIHQPLGGFQGQATDIEIH 144 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + ++ +++ +++ P +K ++ Sbjct: 145 AREIL--------------------RLKRMLNEY-------LAKHTGQPIEKIEADTERD 177 Query: 212 IW-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 178 YFMSAEEAKEYGLIDKV 194 >gi|329296782|ref|ZP_08254118.1| ClpP [Plautia stali symbiont] Length = 207 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ ++ +K Sbjct: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K Q M +++ +E ++ ++ R Sbjct: 154 REIL----------------KVKQRMNELM-----------AEHTGKSLEQIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA + GL+D + Sbjct: 187 FLSASEAVEYGLVDSI 202 >gi|307265821|ref|ZP_07547372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter wiegelii Rt8.B1] gi|306919216|gb|EFN49439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter wiegelii Rt8.B1] Length = 195 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 81/193 (41%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + +I D+ +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGFAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T MAAS A +L++ + A S + + + + Sbjct: 88 -VVTLCVGMAASMAAFLLAAGAKGKRFALPNSE------IMIHQPLGGMQGQ-------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++ +K ++ + + ++D +D ++E+ P +K ++ + Sbjct: 133 -ATDIK--------IHAERILKLRDKLDKI-------LAENTGQPIEKIKADTERDFFMD 176 Query: 215 GAEAKKVGLIDVV 227 +AK G+ID V Sbjct: 177 AEDAKAYGIIDEV 189 >gi|284927701|gb|ADC29573.1| putative capsid protein [Wolbachia phage WO] gi|284927703|gb|ADC29574.1| putative capsid protein [Wolbachia phage WO] gi|284927705|gb|ADC29575.1| putative capsid protein [Wolbachia phage WO] gi|284927707|gb|ADC29576.1| putative capsid protein [Wolbachia phage WO] gi|284927709|gb|ADC29577.1| putative capsid protein [Wolbachia phage WO] gi|284927711|gb|ADC29578.1| putative capsid protein [Wolbachia phage WO] gi|284927713|gb|ADC29579.1| putative capsid protein [Wolbachia phage WO] gi|284927715|gb|ADC29580.1| putative capsid protein [Wolbachia phage WO] gi|284927717|gb|ADC29581.1| putative capsid protein [Wolbachia phage WO] gi|284927719|gb|ADC29582.1| putative capsid protein [Wolbachia phage WO] gi|284927725|gb|ADC29585.1| putative capsid protein [Wolbachia phage WO] Length = 112 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +RN+ ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 >gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3] gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3] Length = 203 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D S +I ++ + +D + + ++SPGGS AG I+ +Q VK Sbjct: 28 IIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINLYINSPGGSVTAGMGIYDTMQYVKP-- 85 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 P+ T AAS L++ + A + V + + ++ + Sbjct: 86 PITTICLGQAASMGALLLAAGTQGKRHALPNARV------MIHQPMGGFQGQATEIDIHA 139 Query: 153 KSVKSSPMK---AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 + + +K SE +A++ + + Y Sbjct: 140 REI----LKIRERLNQILSEHTGQALEKISQDTERDY----------------------- 172 Query: 210 GRIWTGAEAKKVGLIDVV 227 +G EAK GLID V Sbjct: 173 --FMSGTEAKDYGLIDEV 188 >gi|317047175|ref|YP_004114823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp. At-9b] gi|316948792|gb|ADU68267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp. At-9b] Length = 207 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ ++ +K Sbjct: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K Q M +++ +E ++ ++ R Sbjct: 154 REIL----------------KVKQRMNELM-----------AEHTGKSLEQIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA + GL+D + Sbjct: 187 FLSASEAVEYGLVDSI 202 >gi|269203617|ref|YP_003282886.1| phage Clp protease [Staphylococcus aureus subsp. aureus ED98] gi|262075907|gb|ACY11880.1| phage Clp protease [Staphylococcus aureus subsp. aureus ED98] Length = 257 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDAIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 132 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 133 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 160 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID + G E+ S+ Sbjct: 161 MLDAETWLTAEEALSFGLIDEILGANEIAASISK 194 >gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter ethanolicus JW 200] gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermoanaerobacter ethanolicus JW 200] Length = 195 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G+ I D+ +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 28 RIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPGGSITAGFAIYDTMQYIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T MAAS A +L++ + A S + + + + Sbjct: 88 --VVTLCVGMAASMAAFLLAAGAKGKRFALPNSE------IMIHQPLGGMQGQ------- 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ +K ++ + + ++D +D ++E+ P +K ++ + Sbjct: 133 --ATDIK--------IHAERILKLRDKLDKI-------LAENTGQPIEKIKADTERDFFM 175 Query: 214 TGAEAKKVGLIDVV 227 EAK G+ID V Sbjct: 176 DAEEAKAYGIIDEV 189 >gi|291297752|ref|YP_003509030.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728] gi|290566972|gb|ADD39937.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728] Length = 204 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 73/192 (38%), Gaps = 34/192 (17%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G D Q L ++ +S ++S + + ++SPGGS AG AI+ ++ + N Sbjct: 25 RIIVLGTEVDDQVANRLCAQLLLLSAENSRDDISLYINSPGGSVSAGMAIYDTMRLIPND 84 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS G ++ CA G+ G + P L + Sbjct: 85 --VRTVAMGLAASMGQVLLCA------------GTAGKRYSLPNSHVLLHQ--------- 121 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS-DGRIWTG 215 S V++ ++ LV+ P +K S R + Sbjct: 122 -------GSAGFGGTAADVEIYAGHLERVSARMTELVARHTGQPVEKVEKDSLRDRWFDA 174 Query: 216 AEAKKVGLIDVV 227 AEA + G ID + Sbjct: 175 AEALEYGFIDHI 186 >gi|260460897|ref|ZP_05809147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium opportunistum WSM2075] gi|259033474|gb|EEW34735.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium opportunistum WSM2075] Length = 209 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 37/205 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + ++ + ++ + + ++SPGG +G AI+ +Q +K Sbjct: 37 IIFITGPVEDGMATLVCAQLLFLEAENPKKEINLYINSPGGVVTSGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ A ++ A + + + Sbjct: 96 -VSTLCIGQAASMGSLLLTAGHKDMRFATPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + ++ ++ Y + Y++ D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKLKRRLNEVY-------VKHTGKSYEEIEKTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA 239 EA+ GLID V E + A Sbjct: 185 ADEARDFGLIDKVISSREAAEGALA 209 >gi|163847092|ref|YP_001635136.1| endopeptidase Clp [Chloroflexus aurantiacus J-10-fl] gi|222524926|ref|YP_002569397.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl] gi|163668381|gb|ABY34747.1| Endopeptidase Clp [Chloroflexus aurantiacus J-10-fl] gi|222448805|gb|ACM53071.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl] Length = 221 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 34/200 (17%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G I+D + ++ ++ + +D + + ++SPGGS AG I+ + ++ Sbjct: 52 RIVILGTPIDDQIANLIVAQLLFLESEDPDRDIWLYINSPGGSVTAGLGIYDTMHHIRPD 111 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MA S ++ I+A G+ G + P+ +I Sbjct: 112 --VATVCVGMAGS----MATP---ILAG-----GAKGKRYSLPHS---------TIHMHP 148 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + +P V++M + L+++ P ++ D ++ T Sbjct: 149 AGGGARGYAP-------DVEIMARELLRLQQLVRELLAKDTGQPIERIAKDFDRDLFMTP 201 Query: 216 AEAKKVGLIDVVGGQEEVWQ 235 +AK+ G+ID + +E+V + Sbjct: 202 EQAKEYGIIDEILTREDVKK 221 >gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Veillonella sp. oral taxon 158 str. F0412] gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Veillonella sp. oral taxon 158 str. F0412] Length = 197 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 75/202 (37%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q + K Sbjct: 28 IIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQYI---K 84 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + V A+ L++ + A + V + V+ ++ + Sbjct: 85 PDVSTICVGSAASMGAVLLTAGTKGKRYALPHARV------MIHQPLGGVQGQASEIEIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ S + +V+ R+ D Sbjct: 139 AREILR----------------MREELNGILASRSGQDIEVVA--RDTDRDN-------- 172 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GLID V +E V Sbjct: 173 FMSAQDAVEYGLIDEVLTREPV 194 >gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella parvula ATCC 17745] gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella sp. 6_1_27] gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella sp. 3_1_44] gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella parvula ATCC 17745] gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella sp. 3_1_44] gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella sp. 6_1_27] Length = 197 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 75/202 (37%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q + K Sbjct: 28 IIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQYI---K 84 Query: 98 PVI--TEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + V A+ L++ + A + + + V+ ++ + Sbjct: 85 PDVSTICVGSAASMGAVLLTAGTKGKRYALPHAR------IMIHQPLGGVQGQASEIEIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + ++ S + +V+ R+ D Sbjct: 139 AREILR----------------MREELNGILASRSGQDIEVVA--RDTDRDN-------- 172 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 + +A + GLID V +E V Sbjct: 173 FMSAQDAVEYGLIDEVLTREPV 194 >gi|332290449|ref|YP_004421301.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium anatis UMN179] gi|330433345|gb|AEC18404.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium anatis UMN179] Length = 654 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 40/203 (19%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ ++ A + I +I +Q+ ++ I + + + + SPGG + G A Sbjct: 6 SIKASANQSAEVFIYDEIGFWGVSAQQFANELKEIG---NVRQINLHIHSPGGDVFDGIA 62 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++ K + +AAS +I+ A + ++ E ++ L + Sbjct: 63 IYNLLKNHPANK--TVYIDGLAASMASVIAMAGDEVIMPENAM------LMIH------- 107 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G+ + + ++ D++D + D+ Sbjct: 108 KPWGI-----------------QGGDAEELRKYADLLDKVESTLLMAYIAKTGKSEDELA 150 Query: 206 VLSDGRIW-TGAEAKKVGLIDVV 227 + W TG E ++G D + Sbjct: 151 AMLAVETWLTGKECVELGFADKL 173 >gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima MSB8] gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga petrophila RKU-1] gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga sp. RQ2] gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga naphthophila RKU-10] gi|6685314|sp|Q9WZF9|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|166214719|sp|A5IJ91|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706553|sp|B1L812|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga maritima MSB8] gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga petrophila RKU-1] gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga sp. RQ2] gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga naphthophila RKU-10] Length = 203 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 37/198 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + I+D + +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 38 IVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS A L++ + A + + + + Sbjct: 97 -VSTICVGQAASMAAVLLAAGAKGKRYALPNAR------IMIHQPLGGAE---------- 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 P K V+++ + R++S+ P +K +D + + Sbjct: 140 --GPAKD------------VEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMS 185 Query: 215 GAEAKKVGLIDVVGGQEE 232 EAK+ G++D V E Sbjct: 186 AEEAKEYGIVDKVVSTRE 203 >gi|89101082|ref|ZP_01173920.1| TepA [Bacillus sp. NRRL B-14911] gi|89084194|gb|EAR63357.1| TepA [Bacillus sp. NRRL B-14911] Length = 256 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + LI +I I ++ L+V L++ GG AG AI + + KP ++ V S Sbjct: 79 EHLIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAISEMLASLS--KPTVSIVLGGGHSI 136 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV P +LDK+ + + + K Sbjct: 137 GVPIAVSCDYSFIAETATMTIHPIRLTGLVIGV----PQTFEYLDKMQDRVINFVTGHSK 192 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 F ++ F ++ N+ D + GA+A Sbjct: 193 VSEQQFKDL-----------------MF----AKG-NLTRDIGTNV------VGADAVSY 224 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 225 GLIDAVGGVGPALKKLNEL 243 >gi|332653034|ref|ZP_08418779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcaceae bacterium D16] gi|332518180|gb|EGJ47783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcaceae bacterium D16] Length = 193 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + ++ D+ ++ ++ + D + ++SPGGS AG AI+ +Q VK Sbjct: 29 IIFLSEEVNDTTASLVVAQLLYLESQDPDKDIQFYINSPGGSVTAGMAIYDTMQYVKCD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVS 151 V T +AAS +L+S + +A S + S G Q + L +L Sbjct: 88 -VSTICIGLAASMGAFLLSAGAKGKRLALPNSEIMIHQPSAGTQGQITDMALHLKRL--- 143 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + VK K +E K+++ + + Sbjct: 144 -EVVK----KRMNRILAENTGKSIEQVTADCERDN------------------------- 173 Query: 212 IWTGAEAKKVGLIDVV 227 + EA + GLID V Sbjct: 174 FMSAQEALEYGLIDRV 189 >gi|116793577|gb|ABK26796.1| unknown [Picea sitchensis] Length = 248 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G I D + ++ ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 63 IICINGPIADETASVVVAQLLFLESENPQKPINMYINSPGGVVTAGLAIYDTMQYIKS-- 120 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G L+ A GS G P + + + S Sbjct: 121 PVTTLCIGQAASMGSLLLAA------------GSHGERRALPNARVMIHQ----PSGGAS 164 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 ++ K + ++ ++ Y ++ +K + + + Sbjct: 165 GQASDI-----AIHAKEILKTRERLNGLY-------AKHTGQTIEKIEQFMERDTFMSPD 212 Query: 217 EAKKVGLIDVV 227 EAK+ GLID V Sbjct: 213 EAKEFGLIDEV 223 >gi|284927727|gb|ADC29586.1| putative capsid protein [Wolbachia phage WO] gi|284927729|gb|ADC29587.1| putative capsid protein [Wolbachia phage WO] gi|284927731|gb|ADC29588.1| putative capsid protein [Wolbachia phage WO] gi|284927733|gb|ADC29589.1| putative capsid protein [Wolbachia phage WO] Length = 110 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +RN+ ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 >gi|326403118|ref|YP_004283199.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium multivorum AIU301] gi|325049979|dbj|BAJ80317.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium multivorum AIU301] Length = 209 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D + ++ + ++ + + ++SPGG AG AI+ +Q +K+ Sbjct: 39 IIFLTGPVYDQVGSLIAAQLLFLESENPSKEIAFYINSPGGVVSAGLAIYDTMQYIKS-- 96 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ A A S I V + + + + + Sbjct: 97 PVSTVCIGQAASMGSLLLAAGEKGKRFALPNSR---IMVHQPSGGAQGQASDIEIQAREI 153 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWT 214 + ++ ++ Y + L R + Sbjct: 154 LT--------------------LRRRLNDIY-------VTHTGQSLEAIEQALERDRFMS 186 Query: 215 GAEAKKVGLIDVV 227 EA++ GL+D V Sbjct: 187 ANEAQEFGLVDEV 199 >gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505] Length = 237 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 81/194 (41%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ + +D + + ++SPGGS YAG AI+ IQ+++ Sbjct: 59 RIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGSVYAGMAIYDTIQQIRPD 118 Query: 97 KPVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L++ + ++ S + + + + + I+ Sbjct: 119 --VVTICFGLAASMGAFLLTAGTAGKRMSLPDSR------IMIHQPLGGAQGQA-IDIEI 169 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + + ++ ++ L+S+ P ++ ++ + Sbjct: 170 ----------------QAREILYIKANLNQ-------LMSKHTGQPLERIEADTERDFFM 206 Query: 214 TGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 207 SPQEAKDYGLIDQV 220 >gi|281487033|gb|ADA71068.1| putative capsid protein [Wolbachia phage WO] Length = 123 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|256832187|ref|YP_003160914.1| Endopeptidase Clp [Jonesia denitrificans DSM 20603] gi|256685718|gb|ACV08611.1| Endopeptidase Clp [Jonesia denitrificans DSM 20603] Length = 207 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ + ++ ++ +D + + ++SPGGS AG AI+ +Q +K V+T MA Sbjct: 41 ENANAICAQMLLLAAEDPDKDIYLYINSPGGSITAGMAIYDTMQFIKPD--VVTVAMGMA 98 Query: 108 ASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + + A + V+ P S + + Sbjct: 99 ASMGQFLLSSGKRGKRFATPHAR-----VMMHQP-----------------SGGIGGTAT 136 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 +N + + M+ V+ L++E ++ SD R +T EA + G I Sbjct: 137 DIR-INAQLILHMKKVLAE-------LIAEQTGKTVEQINTDSDRDRWFTAQEALEYGFI 188 Query: 225 DVV 227 D + Sbjct: 189 DHI 191 >gi|163746712|ref|ZP_02154069.1| Endopeptidase Clp [Oceanibulbus indolifex HEL-45] gi|161379826|gb|EDQ04238.1| Endopeptidase Clp [Oceanibulbus indolifex HEL-45] Length = 218 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 76/207 (36%), Gaps = 37/207 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I ++ ++ + ++ + + ++SPGG AG +I+ +Q +K + Sbjct: 38 IIFVNGPIHSGMSHLVVAQLLHLEAENPTKEISMYINSPGGEVTAGLSIYDTMQYIKPK- 96 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T + MAAS G +I+ G+ F P + + + S Sbjct: 97 -VSTLICGMAASMGSVIAIGGEK------------GMRFALPNAEVMIHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + + + ++ + +L + P D D +W T Sbjct: 136 GGSQGM--------AEDILISARHIERTRERMYQLYVKHSGQPLDVVQKALDRDLWMTPE 187 Query: 217 EAKKVGLIDVV----GGQEEVWQSLYA 239 EAK+ G +D + G E+ + Sbjct: 188 EAKEWGHLDEIVESRGKAEDAAATAKG 214 >gi|281487025|gb|ADA71064.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|304320235|ref|YP_003853878.1| hypothetical protein PB2503_03302 [Parvularcula bermudensis HTCC2503] gi|303299137|gb|ADM08736.1| hypothetical protein PB2503_03302 [Parvularcula bermudensis HTCC2503] Length = 354 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 25/185 (13%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + D+++++ I + +I+ +PGG I RAI+ + P V Sbjct: 84 LNDAEDVLNAIRSTPA-GTPLEIILH--TPGGLVLPALQIARAIK--AHAGPKTVFVPHY 138 Query: 107 AASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 A S G LI+ A++ I+ + +++G I + P V + Sbjct: 139 AMSGGTLIALAADNIILNDHAVLGPIDPQIGGLPAASIAH---------VTETKSPDTIE 189 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFV-RLVSESRNIPYDKTLVLSDGRIWT------GAEA 218 F+ V + Q ++ + + VS N + LS GR WT AEA Sbjct: 190 DFTWVLADVARKAQQQLERAAKDLLSGTVSP--NAAHAIAEELSSGR-WTHDYPIDAAEA 246 Query: 219 KKVGL 223 +++GL Sbjct: 247 REIGL 251 >gi|84494299|ref|ZP_00993418.1| ATP-dependent Clp protease proteolytic subunit 1 [Janibacter sp. HTCC2649] gi|84383792|gb|EAP99672.1| ATP-dependent Clp protease proteolytic subunit 1 [Janibacter sp. HTCC2649] Length = 206 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ ++ +DS + + ++SPGGS AG AIF +Q V N V T MA Sbjct: 40 DNANAICAQMLLLAAEDSEKDIWLYINSPGGSVTAGMAIFDTMQWVPND--VATVAMGMA 97 Query: 108 ASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + A A + V + P Sbjct: 98 ASMGQFLLSAGTPGKRHATPHARV------MMHQ-------------------PSGGIGG 132 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 S++ +A Q++ L++E ++ SD R +T +EAK+ G + Sbjct: 133 TASDIKIQAEQLL-----HIKKQMAELIAEHTGQTPEQIEEDSDRDRWFTASEAKEYGFV 187 Query: 225 DVV 227 D V Sbjct: 188 DHV 190 >gi|326803696|ref|YP_004321514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Aerococcus urinae ACS-120-V-Col10a] gi|326651369|gb|AEA01552.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Aerococcus urinae ACS-120-V-Col10a] Length = 200 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + +I ++ + D+ + + ++SPGGS AG AI+ +Q V Sbjct: 29 IIMLSGEVNDDMANSVIAQLLFLDAQDNDKDIYIYINSPGGSVTAGMAIYDTMQFVNAD- 87 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+T V +AAS +GSI ++ + L + + Sbjct: 88 -VVTIVTGLAAS-------------------MGSILLIGGTKGKRYALP----HSEVLIH 123 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 P+ +E+ A ++Q + +++E DK D W T Sbjct: 124 QPLGGVQGQATEIEISARHILQ-----TKQTLKEIIAERSGQDIDKVEKDMDRDYWMTAK 178 Query: 217 EAKKVGLIDVV 227 EAK G+ID + Sbjct: 179 EAKDYGIIDEI 189 >gi|229120181|ref|ZP_04249432.1| Clp protease [Bacillus cereus 95/8201] gi|228663222|gb|EEL18811.1| Clp protease [Bacillus cereus 95/8201] Length = 236 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 46/198 (23%) Query: 39 ARIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 A + + G I + I R + +A + V ++SPGG + AI + Sbjct: 9 ADMYLYGSIGSGWFADISSSEIRRKLGNINAETIHVHINSPGGDVFESIAIHNLFKNHNA 68 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 +I + +AAS +I+ A++ ++ + ++ L + + Sbjct: 69 T--IIIHIDGLAASGASVIAMAADKVIMPKNTM------LMIH------------KAWTF 108 Query: 156 KSSP----MKAEPSPFSEVNPKAVQMMQDVVDSSY-HWFVRLVSESRNIPYDKTLVLSDG 210 + K ++ + V SY FV SE + + Sbjct: 109 AAGNAEQLRKVAND---------LEKIDTAVTESYTSRFVGERSELETLLAE-------- 151 Query: 211 RIW-TGAEAKKVGLIDVV 227 W T E +GL D + Sbjct: 152 ETWLTAEECLALGLCDEI 169 >gi|284030228|ref|YP_003380159.1| endopeptidase Clp [Kribbella flavida DSM 17836] gi|283809521|gb|ADB31360.1| Endopeptidase Clp [Kribbella flavida DSM 17836] Length = 207 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ ++ +D + + ++SPGGS AG AI+ +Q + N V T +A Sbjct: 43 DNANAICAQMLLLNAEDPNKDIWLYINSPGGSVDAGMAIYDTMQYISND--VATVGMGLA 100 Query: 108 ASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + CA N A + + + P Sbjct: 101 ASMGQFLLCAGAKNKRFALPHAR------IMMHQ-------------------PSGGMGG 135 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 S++ +A Q + +L++E ++ +D R +T +AK+ G I Sbjct: 136 TASDIKIQAQQSL-----HIKAQLFKLIAEHTGQALEQVENDADRDRWFTADQAKEYGFI 190 Query: 225 DVV 227 D V Sbjct: 191 DHV 193 >gi|187933949|ref|YP_001886447.1| peptidase S14, ClpP [Clostridium botulinum B str. Eklund 17B] gi|187722102|gb|ACD23323.1| peptidase S14, ClpP [Clostridium botulinum B str. Eklund 17B] Length = 247 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 52/224 (23%) Query: 27 WSSHVEDNSPHVARIAI------------RGQIEDSQELIERIERISR-DDSATALIVSL 73 +S + N P+V I I G+ +S+ I+++ + S + + + + Sbjct: 6 FSIKQQANKPNVLDIYIYDNVEGDSYNWWTGEKMESETSANYIKQVLESNQSTSEINLYI 65 Query: 74 SSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV---- 129 +S GG G I+ +++ + V + A S +I+ + +V +L+ Sbjct: 66 NSYGGEVKEGLGIYNQLKRHPAQ--VNVYIDGFACSIASVIAMVGDKVVMGTNALMMIHH 123 Query: 130 GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWF 189 SIG + ++ + + S S + Sbjct: 124 ASIGCYG---NAEELRKAAN-DVEVI------DQASCSSYLTKAGE-------------- 159 Query: 190 VRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQEE 232 + L D + W ++ + GL D + GQE+ Sbjct: 160 --------KLDEATLKQLLDNQTWLNASQCLEYGLCDEIAGQED 195 >gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum C str. Eklund] gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum C str. Eklund] Length = 195 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 41/185 (22%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 VVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIYDTMQYIKPD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + A S + + + +G+ + +K + + Sbjct: 102 FLLTAGAKGKRFALPNSE------IMIHQPLGGFQGQATDIGIHANRIL--KIKDKLNKI 153 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 SE K +++++ V+ F+ EAK+ GLID Sbjct: 154 LSERTGKPLEVIKKDVER--DNFME-----------------------AEEAKEYGLIDD 188 Query: 227 VGGQE 231 V Sbjct: 189 VITSR 193 >gi|291543930|emb|CBL17039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus sp. 18P13] Length = 196 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 34/179 (18%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + D + + ++SPGGS AG AI+ +Q +K V T +AAS Sbjct: 44 VVAQLLYLESQDPDKDISLYINSPGGSVSAGFAIYDTMQYIKCD--VSTICIGLAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L+S + A S + + + + + + Sbjct: 102 FLLSSGAKGKRFALPNSE------IM-------------IHQPLIGGGGLSGQAT----- 137 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLIDVV 227 +Q+ + + + R++SE+ + +D R T EA + GLID V Sbjct: 138 ---DIQIRTENLLRTKENLNRILSENTGKSIEDIRRDTD-RDNFMTANEAMEYGLIDKV 192 >gi|281487029|gb|ADA71066.1| putative capsid protein [Wolbachia phage WO] Length = 123 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +Q VD Y FV+L++ +R + ++ ++ ++ G +A ++GL D Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRGLSIERIRS-TEAGLYFGEKAVEIGLADG 52 >gi|270263570|ref|ZP_06191839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia odorifera 4Rx13] gi|270042454|gb|EFA15549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia odorifera 4Rx13] Length = 207 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + + + + ++SPGG AG +I+ ++ +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGSFLLTAGAKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ +E ++ ++ R Sbjct: 154 REIL----------------KVKARMNELM-----------AEHTGQTLEQIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 T EA + GL+D + Sbjct: 187 FMTAEEAVEYGLVDGI 202 >gi|330444244|ref|YP_004377230.1| Clp protease [Chlamydophila pecorum E58] gi|328807354|gb|AEB41527.1| Clp protease [Chlamydophila pecorum E58] Length = 194 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 41/186 (22%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + + I ++ + D + ++SPGGS AG AI+ I+ + + PV T V +AA Sbjct: 36 SAADAIRKLWYLEMTDPGKPITFVINSPGGSVDAGFAIWDQIKMLTS--PVTTVVTGLAA 93 Query: 109 S-AGYLISCAS-NIIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 S L CA+ A S + SIG P + L + + + + Sbjct: 94 SMGSVLSLCAAPGRRFATPHSRIMIHQPSIG----GP-ITGQATDLDIHAREILKTK-AR 147 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKV 221 + E + +++ +D R++ W T EAK Sbjct: 148 IVDVYVEATHQPRDVIEKAID-------------RDM-------------WMTADEAKDF 181 Query: 222 GLIDVV 227 GL+D + Sbjct: 182 GLLDGI 187 >gi|281487007|gb|ADA71055.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q VD Y FV+L++ +R + +K ++ ++ G +A ++G+ D V E + Sbjct: 5 LQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFINNH 63 Query: 238 YALGVDQSIRKIKD 251 + V + ++ + Sbjct: 64 KSRSVSMTTNELTE 77 >gi|145596011|ref|YP_001160308.1| endopeptidase Clp [Salinispora tropica CNB-440] gi|145305348|gb|ABP55930.1| Endopeptidase Clp [Salinispora tropica CNB-440] Length = 213 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ ++ +D + + ++SPGGS Y+G AI+ +Q + N V T MAAS Sbjct: 50 ANRICAQLLLLAAEDPDRDINLWINSPGGSVYSGMAIYDTMQFIDND--VSTVAMGMAAS 107 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ CA A + + + P Sbjct: 108 MGQLLLCAGTKGKRYALPHAR------IMMHQ-------------------PSGGMGGTA 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 S++ +A QM+ + F V+ + SD R +T EA + G ID Sbjct: 143 SDIAIQAEQMLY-----TKRMFQERVAFHTGQSQAQIEADSDRDRWFTAQEAMEYGFIDK 197 Query: 227 V 227 V Sbjct: 198 V 198 >gi|207724090|ref|YP_002254488.1| clpp-related protease protein [Ralstonia solanacearum MolK2] gi|206589299|emb|CAQ36261.1| putative clpp-related protease protein [Ralstonia solanacearum MolK2] Length = 255 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 42/241 (17%) Query: 49 DSQELIERIERISRDDSATALI-VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + ++ + I+ D +I + ++SPGG +A A+ A++ + +I V +A Sbjct: 48 SATTFVKELAGITAD-----VIRLRVNSPGGDVFAARAMEAALRGHSAK--IIVHVDGLA 100 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 ASA + A++ I A+ + + + K + G Sbjct: 101 ASAASFLIMAADEIEIADGAF------IMIH---KAWTALWG------------------ 133 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLIDV 226 N ++ +++D V ++ D W GA +A + G D Sbjct: 134 ---NADDLRAEAELLDKIDSTLVNTYAQRTGQSADDIATWMAAETWLGADDAVERGFADR 190 Query: 227 VGGQE---EVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTK 283 S + L + K P +LL D + ++ Sbjct: 191 KADASAQPSAKASAWNLRAYSNAPKPASATPTVPAAPAVEPQSPAGNLLPDFAAMRRRLD 250 Query: 284 V 284 + Sbjct: 251 L 251 >gi|328911782|gb|AEB63378.1| protein export-enhancing factor [Bacillus amyloliquefaciens LL3] Length = 249 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 53/204 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 72 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 129 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ + + AET+ + +P + + +GV Sbjct: 130 GVPIAVSCDHSFIAETA------TMTIHPVRLTGLV--IGV------------------P 163 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GA 216 + + MQ+ V V V+ NI +K L +++ G Sbjct: 164 QTFEYLDKMQERV-------VNFVTNHSNISEEKFKEL----MFSKGNLTRDIGTNVVGK 212 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 +A GLID VGG + + L L Sbjct: 213 DAADYGLIDAVGGVGQAIKKLNQL 236 >gi|296101559|ref|YP_003611705.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056018|gb|ADF60756.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 207 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + + Sbjct: 101 -VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ ++ ++ R Sbjct: 154 REIL----------------KVKARMNELM-----------AQHTGQSLEQIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA + GL+D + Sbjct: 187 FLSASEAVEYGLVDSI 202 >gi|284018074|sp|Q27539|CLPP1_CAEEL RecName: Full=ATP-dependent Clp protease proteolytic subunit 1, mitochondrial; AltName: Full=Endopeptidase Clp; Flags: Precursor Length = 221 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 31/181 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + LI ++ + + + + ++SPGGS AG AI+ IQ + PV T V A+S Sbjct: 63 ASALIAQLLFLQSESGKKPIHMYINSPGGSVTAGLAIYDTIQMISA--PVSTWVIGQASS 120 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G L+ CA G+ P + + + S + S Sbjct: 121 MGSLLLCAGEK------------GMRSALPNSRIMVHQP--------SGGAQGTCSDIV- 159 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVG 228 + + + ++ ++ Y + YD+ D R + EA K GL+D + Sbjct: 160 IRAEEITRLKRRLNEIYVH-------HTGMSYDEIEKTLDRDRFMSAHEALKFGLVDQIE 212 Query: 229 G 229 Sbjct: 213 T 213 >gi|223040072|ref|ZP_03610353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter rectus RM3267] gi|222878658|gb|EEF13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter rectus RM3267] Length = 196 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+IED + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 30 IIMLSGEIEDGIASAIVAQMLFLEAEDPDKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 89 -VCTICIGQAASMGAFLLSCGAQGKRYALPNSR------IMIHQPLGGA----------- 130 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + M++++++ ++++ K +D + + Sbjct: 131 -RGQATDI-----EIQAKEILRMKEILNAI-------LAKNTGQKLAKIQKDTDRDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 AEAK+ GLID V Sbjct: 178 SAEAKEYGLIDKV 190 >gi|281487031|gb|ADA71067.1| putative capsid protein [Wolbachia phage WO] Length = 115 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ + N+ ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNLNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKDWNPPKN 257 + + V + ++ + N + Sbjct: 62 NHKSRSVSMTTNELTEENYRRE 83 >gi|167750805|ref|ZP_02422932.1| hypothetical protein EUBSIR_01787 [Eubacterium siraeum DSM 15702] gi|167656240|gb|EDS00370.1| hypothetical protein EUBSIR_01787 [Eubacterium siraeum DSM 15702] Length = 320 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 77/200 (38%), Gaps = 45/200 (22%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + ++ + I +D S L++ L++ GG AG AI I + KP ++ V S Sbjct: 79 EHIMPALVAIEQDMSIDGLLIILNTVGGDVEAGLAISELIAGMS--KPTVSIVVGGGHSI 136 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G ++ ++ ++ + +P + L LG+ Sbjct: 137 GVPLAVSARKSFIVPSA------TMTIHPVRMNGLL--LGI------------------- 169 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSES--------RNIPYDKTLVLSD-GRIWTGAEAKK 220 P+ + + + + + VS++ R + K ++ D G + G A Sbjct: 170 --PQTLSYFERMQERI----INFVSKNSRIKPERFRELMMKKDELVMDVGSVLDGETAVN 223 Query: 221 VGLIDVVGGQEEVWQSLYAL 240 GLID +GG + Q LY+L Sbjct: 224 EGLIDSLGGLSDAVQCLYSL 243 >gi|304319808|ref|YP_003853451.1| Protease subunit of ATP-dependent Clp protease [Parvularcula bermudensis HTCC2503] gi|303298711|gb|ADM08310.1| Protease subunit of ATP-dependent Clp protease [Parvularcula bermudensis HTCC2503] Length = 210 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ D S ++ ++ + D+ + ++SPGGS AG A++ ++ ++ + Sbjct: 38 IIFLSGQVHDQVSTLIVAQLLFLEADNPKKDIAFYINSPGGSVTAGLAMYDTMRYIRPQ- 96 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + T +AAS G L+ A + G+ F P + + + Sbjct: 97 -ISTMCVGLAASMGSLLLTAGDK------------GMRFSLPNSRIMVHQ---------- 133 Query: 158 SPMKAEPSPFSEVNPKAVQMMQ--DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 P S++ A ++Q ++ Y E Y+ D + T Sbjct: 134 -PSAGFQGQASDIERHARDIIQTKKRLNEIY-------VEHTGQDYETIERTLDRDTFMT 185 Query: 215 GAEAKKVGLIDVV 227 +A GLID V Sbjct: 186 PEDALDFGLIDQV 198 >gi|328954279|ref|YP_004371613.1| protein of unknown function DUF114 [Desulfobacca acetoxidans DSM 11109] gi|328454603|gb|AEB10432.1| protein of unknown function DUF114 [Desulfobacca acetoxidans DSM 11109] Length = 275 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%) Query: 47 IEDSQELIERIERISRDDSATALIVSL--SSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 + DS++++ I D + + +PGG A I RAI + + V Sbjct: 68 VNDSEQVLRAIH--LTDPEVP---LDIIMHTPGGLVLASMQIARAIHR--HPGKTTVFVP 120 Query: 105 EMAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ IV E +++G Sbjct: 121 HYAMSGGTLIALAADEIVMCEDAVLG 146 >gi|145629849|ref|ZP_01785642.1| putative Clp-like protease [Haemophilus influenzae 22.1-21] gi|144977753|gb|EDJ87697.1| putative Clp-like protease [Haemophilus influenzae 22.1-21] Length = 680 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 39/203 (19%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ + A I+I +I + + ++ + + + + SPGG + G A Sbjct: 27 SIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNN--IKQINLHIHSPGGDVFDGIA 84 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++ V + +AAS +I+ A N ++ E ++ + + Sbjct: 85 IYNLLKNHPAN--VTVYIDGLAASMASVIAMAGNEVIMPENAM------MMIH------- 129 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G+ + + ++ D++D + + + ++ Sbjct: 130 KPWGI-----------------QGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELA 172 Query: 206 VLSDGRIWT-GAEAKKVGLIDVV 227 + W G E + G D + Sbjct: 173 EMLSAETWLNGKECVEQGFADKL 195 >gi|197302444|ref|ZP_03167499.1| hypothetical protein RUMLAC_01172 [Ruminococcus lactaris ATCC 29176] gi|197298342|gb|EDY32887.1| hypothetical protein RUMLAC_01172 [Ruminococcus lactaris ATCC 29176] Length = 193 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 39/184 (21%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + ++ ++ + DD + + ++SPGGS AG AI+ +Q +K V T MAA Sbjct: 40 SASVIVAQLLFLEADDPDKDIQLYINSPGGSVTAGMAIYDTMQYIKCD--VSTVCIGMAA 97 Query: 109 S-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAE 163 S +L+S + A + + + + ++ ++ + + + K Sbjct: 98 SMGAFLLSGGAKGKRFALPNAE------IMIHQPLGGAQGQATEIQIAAEHILRTR-KTL 150 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGL 223 S + K ++++Q + + AEAK+ GL Sbjct: 151 NSILAANTGKPLEVIQTDTERDN-------------------------FMSAAEAKEYGL 185 Query: 224 IDVV 227 ID V Sbjct: 186 IDEV 189 >gi|52141692|ref|YP_085137.1| translocation-enhancing protein [Bacillus cereus E33L] gi|118479016|ref|YP_896167.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus thuringiensis str. Al Hakam] gi|196034190|ref|ZP_03101600.1| clp protease [Bacillus cereus W] gi|196038350|ref|ZP_03105659.1| clp protease [Bacillus cereus NVH0597-99] gi|196044682|ref|ZP_03111917.1| clp protease [Bacillus cereus 03BB108] gi|206978174|ref|ZP_03239055.1| clp protease [Bacillus cereus H3081.97] gi|217961217|ref|YP_002339785.1| clp protease [Bacillus cereus AH187] gi|218904924|ref|YP_002452758.1| clp protease [Bacillus cereus AH820] gi|222097242|ref|YP_002531299.1| translocation-enhancing protein [Bacillus cereus Q1] gi|228916434|ref|ZP_04080001.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928846|ref|ZP_04091878.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229092838|ref|ZP_04223972.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-42] gi|229140438|ref|ZP_04268993.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST26] gi|229186034|ref|ZP_04313204.1| Translocation-enhancing protein tepA [Bacillus cereus BGSC 6E1] gi|229197907|ref|ZP_04324623.1| Translocation-enhancing protein tepA [Bacillus cereus m1293] gi|301055286|ref|YP_003793497.1| peptidase S14 ClpP [Bacillus anthracis CI] gi|51975161|gb|AAU16711.1| translocation-enhancing protein [Bacillus cereus E33L] gi|118418241|gb|ABK86660.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus thuringiensis str. Al Hakam] gi|195993264|gb|EDX57222.1| clp protease [Bacillus cereus W] gi|196024717|gb|EDX63389.1| clp protease [Bacillus cereus 03BB108] gi|196030758|gb|EDX69356.1| clp protease [Bacillus cereus NVH0597-99] gi|206743591|gb|EDZ55017.1| clp protease [Bacillus cereus H3081.97] gi|217066012|gb|ACJ80262.1| clp protease [Bacillus cereus AH187] gi|218538614|gb|ACK91012.1| clp protease [Bacillus cereus AH820] gi|221241300|gb|ACM14010.1| translocation-enhancing protein [Bacillus cereus Q1] gi|228585625|gb|EEK43727.1| Translocation-enhancing protein tepA [Bacillus cereus m1293] gi|228597453|gb|EEK55103.1| Translocation-enhancing protein tepA [Bacillus cereus BGSC 6E1] gi|228642999|gb|EEK99275.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST26] gi|228690460|gb|EEL44243.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-42] gi|228830653|gb|EEM76258.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843237|gb|EEM88318.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300377455|gb|ADK06359.1| peptidase S14 ClpP [Bacillus cereus biovar anthracis str. CI] Length = 249 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. PCC 7002] gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002] Length = 199 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 73/184 (39%), Gaps = 39/184 (21%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++I + + +D + + + ++SPGGS AG AI+ ++ +K+ V+T +AAS Sbjct: 44 ANQIIAIMLYLDSEDPSKPIYLYINSPGGSVTAGLAIYDTMKHIKSE--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEP 164 +L+S + +A S + + ++ + I+ Sbjct: 102 MGAFLLSAGTKGKRLALPHSR------IMIHQPLGGIQGRRQATDIDIE----------- 144 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGL 223 K + ++ ++ L++ +K +D + + EA + GL Sbjct: 145 -------AKEIIRIKHQLNE-------LMAAHTGQSIEKIEKDTDRDYFMSAQEALEYGL 190 Query: 224 IDVV 227 ID V Sbjct: 191 IDKV 194 >gi|49479417|ref|YP_037857.1| translocation-enhancing protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|225865776|ref|YP_002751154.1| clp protease [Bacillus cereus 03BB102] gi|228935095|ref|ZP_04097923.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|49330973|gb|AAT61619.1| translocation-enhancing protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|225788341|gb|ACO28558.1| clp protease [Bacillus cereus 03BB102] gi|228824565|gb|EEM70369.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 249 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|86148885|ref|ZP_01067136.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. MED222] gi|85833328|gb|EAQ51535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. MED222] Length = 198 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 32 IIFLTGQVEDHMANLVVAQLLFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFI---K 88 Query: 98 PVI--TEVHEMAASAGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + + + + +L++ + S V + + + + Sbjct: 89 PNVSTVCMGQACSMGAFLLAGGTPGKRHVLPNSRV------MIHQPLGGFQGQASDIQIH 142 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + Q + ++ + +V R+ D Sbjct: 143 AQEILT----------------IKQKLNKLLAEHTGQPLEVVE--RDTDRDN-------- 176 Query: 212 IWTGAEAKKVGLIDVV 227 + +A + GL+D V Sbjct: 177 FMSADQAVEYGLVDSV 192 >gi|260459137|ref|ZP_05807392.1| Endopeptidase Clp [Mesorhizobium opportunistum WSM2075] gi|259034691|gb|EEW35947.1| Endopeptidase Clp [Mesorhizobium opportunistum WSM2075] Length = 201 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G+I D S + ++ + D+ + + ++SPGG +G AI+ +Q + Sbjct: 33 IIFINGEINDDISALVCAQLLSLESDNPDKEISLYINSPGGVVTSGFAIYDTMQYISC-- 90 Query: 98 PVITEVHEMAASAG---YLISCASNIIVAAETSL 128 PV T AAS G + I ++ Sbjct: 91 PVSTVCMGFAASMGSFLLMAGTPGRRISLPNATI 124 >gi|228947517|ref|ZP_04109807.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123310|ref|ZP_04252514.1| Translocation-enhancing protein tepA [Bacillus cereus 95/8201] gi|228660086|gb|EEL15722.1| Translocation-enhancing protein tepA [Bacillus cereus 95/8201] gi|228812037|gb|EEM58368.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 249 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|310657900|ref|YP_003935621.1| clpa-clpp and clpx-clpp ATP-dependent serine protease proteolytic subunit [Clostridium sticklandii DSM 519] gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases [Clostridium sticklandii] Length = 194 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 43/182 (23%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH-EMAAS-A 110 ++ ++ + +D + + ++SPGGS AG AI+ +Q + KP + + MAAS Sbjct: 44 IVAQLLHLESEDPDKDIFLYINSPGGSITAGMAIYDTMQYI---KPDVATICVGMAASMG 100 Query: 111 GYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSP 166 +L++ + A S + + + + + + + Sbjct: 101 AFLLTAGAKGKRFALPNSE------IMIHQPLGGTQGQATDIKIHAERIIR--------- 145 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLID 225 + +++ ++ P +K ++ + + EAK+ GLID Sbjct: 146 -------MRNKLNEIM-----------ADRSGQPLEKIERDTERDFFMSSTEAKEYGLID 187 Query: 226 VV 227 V Sbjct: 188 EV 189 >gi|298693635|gb|ADI96857.1| Prophage Clp protease-like protein [Staphylococcus aureus subsp. aureus ED133] Length = 257 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWVESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 132 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 133 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 160 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID V G E+ S+ Sbjct: 161 MLDAETWLTAEEALSFGLIDEVLGANEIAASISK 194 >gi|261250806|ref|ZP_05943380.1| nfed family protein [Vibrio orientalis CIP 102891] gi|260937679|gb|EEX93667.1| nfed family protein [Vibrio orientalis CIP 102891] Length = 448 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 89/245 (36%), Gaps = 53/245 (21%) Query: 5 LKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDS--QELIERIERISR 62 L++IK ++ + N V I+I G I + + ++I+ ++ Sbjct: 3 LQRIKALLYAFLILWWPASVVQAEKNNAPNQ-TVPVISISGAIGPAVGDYVTKQIQLANQ 61 Query: 63 DDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISCASN 119 + AL++++ +PGG + I + I + + P++ V AASAG I A + Sbjct: 62 QPNVPALMITIDTPGGLVSSLRDINQTI--LASNIPILCLVHPQGARAASAGTFILYACH 119 Query: 120 IIVAAETSLVG-----SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE----- 169 I A + +G SIG SP Sbjct: 120 IAAMAPATTLGAATLVSIG----------------------------GGGSPNQPQEKPQ 151 Query: 170 -VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVV 227 +++ D + ++R +++ R + + D + +EAK+ +I+++ Sbjct: 152 TPTAMEKKVLNDSI-----AYIRSLAQLRGRNAEWAESAVRDAATLSASEAKEKNVINLI 206 Query: 228 GGQEE 232 E Sbjct: 207 ADSPE 211 >gi|225847902|ref|YP_002728065.1| periplasmic serine protease [Sulfurihydrogenibium azorense Az-Fu1] gi|225644158|gb|ACN99208.1| periplasmic serine protease [Sulfurihydrogenibium azorense Az-Fu1] Length = 282 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 46 QIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHE 105 IEDS+ ++ I +D + + +PGG A A I +A+ + V V Sbjct: 72 TIEDSEAVLRAIRMTPKDKPIDFI---IHTPGGIALAATQIAKALADHPAK--VRVIVPH 126 Query: 106 MAASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ +++G Sbjct: 127 FAMSGGTLIALAADEILMDNHAVLG 151 >gi|52145324|gb|AAU29366.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y F++L++ +R + +K ++ ++ G +A ++G+ D V E Sbjct: 3 ESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ + Sbjct: 62 NHKSRSVSMTTNELTE 77 >gi|38146271|gb|AAR11498.1| capsid protein [Wolbachia phage WO] Length = 127 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D + + ++ Sbjct: 4 LQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGMTILSSINKNR 62 Query: 238 YALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIP 277 +Q+ ++ N +L L S + + I Sbjct: 63 SITMNEQTTNDLETDNTKYRTEVLELIRLCNLSKMPEKIG 102 >gi|297566631|ref|YP_003685603.1| hypothetical protein Mesil_2227 [Meiothermus silvanus DSM 9946] gi|296851080|gb|ADH64095.1| protein of unknown function DUF107 [Meiothermus silvanus DSM 9946] Length = 424 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 89/268 (33%), Gaps = 54/268 (20%) Query: 37 HVARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 I I G I+ + L + ++R R + A+ +++ + +PGG A + I + Sbjct: 18 KTYVIPIEGAIDLPLATFLEQSLDRAER-EGASGVVLYVDTPGGRVDAAMRMSDRI--LA 74 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + P V A SAG LIS ++ I S +G Sbjct: 75 SPLPTFAVVQN-AFSAGALISLSAQQIAMLPGSEIG------------------------ 109 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-- 212 A P + V + V+ + F R V+E+R P + + D + Sbjct: 110 ------AALPIQVTPVTNTVSATDRKVISALRGKF-RAVAEARGRPVNLAEAMVDPEVSV 162 Query: 213 -----------WTGAEAKKVGLID-VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWF 260 + +A ++ + D ++ L G + +++ + F Sbjct: 163 PGLKTKDEPLTLSAQKAVELKVADFQAASLQDA---LTKAGFNPQTERLEPGTRVQAARF 219 Query: 261 CDLKNLSISSLLEDTIPLMKQTKVQGLW 288 ++ L + L+ + G + Sbjct: 220 LTAPTVAAILLAVGVLGLVLEFFTPGTF 247 >gi|323442648|gb|EGB00276.1| phiSLT ORF257-like protein, putative prophage protease [Staphylococcus aureus O46] Length = 255 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 18 IFIYGDIVSDKWVESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 74 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 75 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 130 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S +++++ + Sbjct: 131 DLLEKTDAVSNSAYLD--------------------------------KAKDLDQEHLKQ 158 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 + D W T EA GLID V G E+ S+ Sbjct: 159 MLDAETWLTAEEALSFGLIDEVLGANEIAASISK 192 >gi|297622694|ref|YP_003704128.1| hypothetical protein Trad_0448 [Truepera radiovictrix DSM 17093] gi|297163874|gb|ADI13585.1| protein of unknown function DUF107 [Truepera radiovictrix DSM 17093] Length = 506 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSAT 67 R+V+L+L+ + + + V + I I + + +R+ R + + Sbjct: 18 FRWVVLALLLGGALLGTGGVAWAQSPSAVWIVPIDATITTATARYVEDRLARANAEGPL- 76 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 A++ ++ +PGGS A E I AI ++ R P I V + A SAG L++ ++ + S Sbjct: 77 AVVFTIDTPGGSVEAAERISSAI--LRARVPTIAVVEQ-AISAGALVAMSAEQVAMLPGS 133 Query: 128 LVG 130 +G Sbjct: 134 AIG 136 >gi|227821606|ref|YP_002825576.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium fredii NGR234] gi|227340605|gb|ACP24823.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium fredii NGR234] Length = 210 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 37/201 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 37 IIFLTGPVEDHMATLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ A ++ A + + + Sbjct: 96 -VSTLCIGQAASMGSLLLAAGHKDMRFATPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y Y++ D + + Sbjct: 133 PSGGFQGQASDI-ERHARDILKMKRRLNEVY-------VRHCGRTYEEVEQTLDRDHFMS 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQ 235 EA GLID V E + Sbjct: 185 SDEALDWGLIDKVITSREAIE 205 >gi|49474139|ref|YP_032181.1| ATP-dependent Clp protease proteolytic subunit [Bartonella quintana str. Toulouse] gi|67460275|sp|Q6G178|CLPP_BARQU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|49239643|emb|CAF26003.1| ATP-dependent clp protease proteolytic subunit [Bartonella quintana str. Toulouse] Length = 210 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 78/209 (37%), Gaps = 39/209 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +EDS + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFINGPVEDSMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRP-- 94 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G L+ A G F P + + + S Sbjct: 95 PVSTLCMGQAASMGSLLLTAGAK------------GHRFTLPNARIMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + S E + + + M+ ++ Y + Y+ D + T Sbjct: 135 GGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VQHTGQDYEVIERTLDRDHFMTAE 186 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 EAK+ GL+D +V Q ++ Sbjct: 187 EAKQFGLVD------DVIQYRAETEKEEK 209 >gi|17538017|ref|NP_496215.1| CLP Protease family member (clpp-1) [Caenorhabditis elegans] gi|3881896|emb|CAA88886.1| C. elegans protein ZK970.2a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 206 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 31/181 (17%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + LI ++ + + + + ++SPGGS AG AI+ IQ + PV T V A+S Sbjct: 48 ASALIAQLLFLQSESGKKPIHMYINSPGGSVTAGLAIYDTIQMISA--PVSTWVIGQASS 105 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G L+ CA G+ P + + + S + S Sbjct: 106 MGSLLLCAGEK------------GMRSALPNSRIMVHQP--------SGGAQGTCSDIV- 144 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVVG 228 + + + ++ ++ Y + YD+ D R + EA K GL+D + Sbjct: 145 IRAEEITRLKRRLNEIYVH-------HTGMSYDEIEKTLDRDRFMSAHEALKFGLVDQIE 197 Query: 229 G 229 Sbjct: 198 T 198 >gi|251781097|ref|ZP_04824017.1| serine protease [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085412|gb|EES51302.1| serine protease [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 253 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 97/272 (35%), Gaps = 57/272 (20%) Query: 30 HVEDNSPHVARIAIRGQIEDSQ------------ELIERIERISRDDSATALIVSLSSPG 77 +++NS + + G I Q ++ + ++ ++ DS + ++S G Sbjct: 23 EIKNNSNGNGELYLYGDIVSDQWGKWSDDDTCPQDIADFLKELNSFDSLD---IYVNSGG 79 Query: 78 GSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 GS +AG AI+ +++ K V +AAS +ISCA + ++ +++ Sbjct: 80 GSVFAGIAIYHQLKRHNGFKTVYV--DGIAASIASVISCAGDKVIIPKSA------QFMI 131 Query: 138 Y-PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSES 196 + P F +S E + + QD + + Y V E Sbjct: 132 HKPTASYFW-----------TSLNADELR----KEADTLDVCQDSIRNIYM---ENVKEG 173 Query: 197 RNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPP 255 I ++ L D W TG + + ++ + +N Sbjct: 174 --ITEEEINNLIDSETWFTGE------------TVTDYFNFEVEESSEKVASTSQFYNKY 219 Query: 256 KNYWFCDLKNLSISSLLEDTIPLMKQTKVQGL 287 KN LKN I + D + QT+++ L Sbjct: 220 KNAPNELLKNKIIKNNENDELKNKLQTELELL 251 >gi|332993662|gb|AEF03717.1| Clp-like protease [Alteromonas sp. SN2] Length = 241 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 36/214 (16%) Query: 41 IAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVI 100 I I I ++I+ + + + + ++S GG+ G AI+ ++ +K Sbjct: 16 IHIDDDIGRDGITAKQIKEELSNHRGS-IEIHINSAGGAVTEGIAIYNMLKAYSGKK--T 72 Query: 101 TEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPM 160 + +AAS +I+ A + I+ G++ + + V + Sbjct: 73 VFIDSLAASMASVIAMAGDTILMPSN------GLMMIH------------NPWGVSTGQ- 113 Query: 161 KAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAK 219 + + +M+ + ++Y + + L D W G + Sbjct: 114 ----AIEHRKTADLLDVMKASMLAAYI-------SKTGLEESEVSQLMDQETWMNGEDCF 162 Query: 220 KVGLIDVVGG--QEEVWQSLYALGVDQSIRKIKD 251 + G ID + ++ + + +IK Sbjct: 163 EKGFIDGLTDSVSQDAVNAKFERVCVAKQAEIKQ 196 >gi|332306926|ref|YP_004434777.1| peptidase S14 ClpP [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174255|gb|AEE23509.1| peptidase S14 ClpP [Glaciecola agarilytica 4H-3-7+YE-5] Length = 241 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 34/194 (17%) Query: 38 VARIAIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 V ++ I I ++ + + A+ V ++S GG G AI+ A++ +K Sbjct: 13 VNKLYIDDDIGKDGITAKKFKD-ELNKQRGAIEVHINSAGGVVTEGIAIYNALKAYTGKK 71 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 VI + +AAS +I+ A +++ G++ + + V S Sbjct: 72 TVI--IDSLAASMASVIAMAGDVVQMPSN------GLMMIH------------NPWGVSS 111 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + D++D + N+ + L DG W G Sbjct: 112 GQ------------ATEHRKTADLLDVMKDAMLAAYMLKTNLDEAQLSELMDGETWMNGE 159 Query: 217 EAKKVGLIDVVGGQ 230 + K+G ID + Sbjct: 160 DCLKLGFIDTLSDS 173 >gi|145640030|ref|ZP_01795627.1| putative Clp-like protease [Haemophilus influenzae PittII] gi|145270863|gb|EDK10783.1| putative Clp-like protease [Haemophilus influenzae PittII] Length = 680 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 68/203 (33%), Gaps = 39/203 (19%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ + A I+I +I + + ++ + + + + SPGG + G A Sbjct: 27 SIKAKANDTAEISIYDEIGFWGVSAASFAQDLKDCGNN--IKQINLHIHSPGGDVFDGIA 84 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++ V + +AAS +I+ A N ++ E ++ + + Sbjct: 85 IYNLLKNHPAN--VTVYIDGLAASMASVIAMAGNEVIMPENAM------MMIH------- 129 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 ++ + ++ D++D + + + ++ Sbjct: 130 -----KPWGIQGGD------------AEDMRKYADLLDKVENTLIPAYASKTGKTPEELA 172 Query: 206 VLSDGRIWT-GAEAKKVGLIDVV 227 + W G E + G D + Sbjct: 173 EMLSAETWLNGKECVEQGFADKL 195 >gi|229586800|ref|YP_002845301.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae ESF-5] gi|228021850|gb|ACP53558.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae ESF-5] Length = 216 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 59 IVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 116 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 117 LLLCGGEK------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 155 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 156 QETLKIKRLLNELYSKHTEQELKHIEKSMERDN------FMSPEEAKKFGLVDNILSSRD 209 Query: 233 VWQSLYA 239 L Sbjct: 210 AMALLAK 216 >gi|319784104|ref|YP_004143580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169992|gb|ADV13530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 209 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 39/206 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + ++ + ++ + + ++SPGG +G AI+ +Q +K Sbjct: 37 IIFITGPVEDGMATLVCAQLLFLEAENPKKEINLYINSPGGVVTSGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKL-GVSIKS 154 V T AAS G L+ A ++ A + + + F + + + Sbjct: 96 -VSTLCIGQAASMGSLLLTAGHKDMRFATPNAR------IMVHQPSGGFQGQASDIERHA 148 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + + ++ ++ Y + Y++ D + Sbjct: 149 L------------------DIIKLKRRLNEVY-------VKHTGKSYEEIEKTLDRDHFM 183 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYA 239 T EAK GLID V E + A Sbjct: 184 TADEAKDFGLIDKVISSREAAEGALA 209 >gi|256369536|ref|YP_003107046.1| ATP-dependent Clp protease proteolytic subunit [Brucella microti CCM 4915] gi|255999698|gb|ACU48097.1| ATP-dependent Clp protease proteolytic subunit [Brucella microti CCM 4915] Length = 209 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 37/199 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFVNGPVEDGMSMLVCAQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRP-- 94 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ + A+ A + + + Sbjct: 95 PVSTLCMGQAASMGSLLLTAGATGHRYALPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + YD D + T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIY-------VKHTGRDYDTIECTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA + GLID V +V Sbjct: 185 AQEALEFGLIDKVVEARDV 203 >gi|308173642|ref|YP_003920347.1| protein export-enhancing factor [Bacillus amyloliquefaciens DSM 7] gi|307606506|emb|CBI42877.1| protein export-enhancing factor [Bacillus amyloliquefaciens DSM 7] gi|328553426|gb|AEB23918.1| protein export-enhancing factor [Bacillus amyloliquefaciens TA208] Length = 245 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 53/204 (25%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPY-VKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 G I+ + + AET+ + +P + + +GV Sbjct: 126 GVPIAVSCDHSFIAETA------TMTIHPVRLTGLV--IGV------------------P 159 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-------------GA 216 + + MQ+ V V V+ NI +K L +++ G Sbjct: 160 QTFEYLDKMQERV-------VNFVTNHSNISEEKFKEL----MFSKGNLTRDIGTNVVGK 208 Query: 217 EAKKVGLIDVVGGQEEVWQSLYAL 240 +A GLID VGG + + L L Sbjct: 209 DAADYGLIDAVGGVGQAIKKLNQL 232 >gi|6723217|dbj|BAA89617.1| capsid protein [Bacteriophage WO] Length = 121 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V Sbjct: 5 LQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGV 53 >gi|119716962|ref|YP_923927.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Nocardioides sp. JS614] gi|119537623|gb|ABL82240.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides sp. JS614] Length = 200 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 50/200 (25%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + GQ D + +L + +S +D + + ++SPGGS AG AI+ ++ + N Sbjct: 20 RIIVLGQQVDDDIANKLCAELLLLSAEDPHRDIALYINSPGGSVSAGLAIYDTMRLIPND 79 Query: 97 KPVITEVHEMAASAGYLISCASN--IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGV 150 V T +AAS G + A A S V GS G+ ++ Sbjct: 80 --VSTLAMGLAASMGQFLLSAGTPGKRYALPHSRVLMHQGSAGIGGTAIDIE-------- 129 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV-VDSSYHWFVRLVSESRNIPYD--KTLVL 207 +Q ++ + + L++E P + + L Sbjct: 130 ---------------------------IQAENLEHTKNVMTGLIAEHTGQPVEVIERDSL 162 Query: 208 SDGRIWTGAEAKKVGLIDVV 227 D R +T +A++ G +D V Sbjct: 163 RD-RWFTAEQAREYGFVDRV 181 >gi|329890026|ref|ZP_08268369.1| clp protease family protein [Brevundimonas diminuta ATCC 11568] gi|328845327|gb|EGF94891.1| clp protease family protein [Brevundimonas diminuta ATCC 11568] Length = 213 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ED + ++ + ++ + + ++SPGG + AI+ +Q +K+ Sbjct: 38 IIFLTGPFEDGMASLICAQLLFLESENPKKEISMYINSPGGQVTSALAIYDTMQYIKS-- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T V MAASAG LI A G P + + + S Sbjct: 96 PVSTVVMGMAASAGSLILTAGEA------------GQRIALPNARVMVHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + S E + + + + ++ Y + Y++ D + T Sbjct: 136 GGFRGTASDI-ERHAEDIIATKRRLNEIY-------VQHTGRTYEEVERTLDRDHFMTAE 187 Query: 217 EAKKVGLIDVV 227 EAK G++D V Sbjct: 188 EAKAWGIVDHV 198 >gi|319788749|ref|YP_004090064.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus albus 7] gi|315450616|gb|ADU24178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus albus 7] Length = 196 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 74/193 (38%), Gaps = 46/193 (23%) Query: 46 QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 I+D + +I ++ + D + + ++SPGGS AG AI+ IQ ++ V T Sbjct: 35 AIDDHVASLVISQLLYLESQDPEKDIDLYINSPGGSVTAGMAIYDTIQYIRCD--VNTIC 92 Query: 104 HEMAAS-AGYLISCASN-IIVAAETS-------LVGSIGVLFQYPYVKPFLDKLGVSIKS 154 MAAS +L+S + + S L+G G+ Q VK + Sbjct: 93 IGMAASMGAFLLSSGTKGKRFSLPNSEIMIHQPLIGGGGISGQCTDVK-------IHSDH 145 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + ++ + + ++ + + ++ I ++ L T Sbjct: 146 LVAT----------------REKLNRILAENSGKSIEQIA----IDTERDNYL------T 179 Query: 215 GAEAKKVGLIDVV 227 EA + GLID V Sbjct: 180 AQEAMEYGLIDKV 192 >gi|281487013|gb|ADA71058.1| putative capsid protein [Wolbachia phage WO] gi|281487015|gb|ADA71059.1| putative capsid protein [Wolbachia phage WO] Length = 115 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ + N+ ++ ++ G +A ++GL D V E Sbjct: 3 ESLQKEVDRLYEMFVQLIARNLNLSIQAIKS-TEAGLYFGEKAVEIGLADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKDWNPPKN 257 + + V + ++ + N + Sbjct: 62 NHKSRSVSMTTNELTEENYRRE 83 >gi|164687878|ref|ZP_02211906.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM 16795] gi|164603153|gb|EDQ96618.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM 16795] Length = 217 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 72/197 (36%), Gaps = 44/197 (22%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + +D + + ++SPGGS AG AI+ +Q VK V T +A Sbjct: 56 ASASVVIAQLLFLEAEDPDKDIYLYINSPGGSVTAGFAIYDTMQHVKCD--VSTICIGLA 113 Query: 108 AS-AGYLISCASN-IIVAAETS-------LVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 AS +L++ + A S L+G G+ Q +K + L +K+ Sbjct: 114 ASFGSFLLAGGAKGKRFALPNSQIMIHQPLIGGNGIQGQATDIKIVAENL------LKTK 167 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEA 218 +E K ++ Y R+ D + EA Sbjct: 168 E--RLNRILAENTGK-------SIEEIY----------RDTDRDN--------FMSAQEA 200 Query: 219 KKVGLIDVVGGQEEVWQ 235 GLID + + + + Sbjct: 201 LDYGLIDSIITRSDSIK 217 >gi|42782881|ref|NP_980128.1| hypothetical protein BCE_3831 [Bacillus cereus ATCC 10987] gi|42738808|gb|AAS42736.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gi|324327690|gb|ADY22950.1| hypothetical protein YBT020_18610 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 249 Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|169625037|ref|XP_001805923.1| hypothetical protein SNOG_15785 [Phaeosphaeria nodorum SN15] gi|160705586|gb|EAT76880.2| hypothetical protein SNOG_15785 [Phaeosphaeria nodorum SN15] Length = 228 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 81/191 (42%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++EDS +I ++ + ++ + + ++SPGGS AG AI+ + +++ Sbjct: 52 IITLNGEVEDSMSAVVIAQLLFLEAENPEKPISMYINSPGGSVSAGLAIYDTMNYIRS-- 109 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T MAAS G L+ G + P+ + + + S Sbjct: 110 PVSTTCMGMAASMGSLLLAGGEP------------GQRYILPHARVMIHQP--------S 149 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + S ++ + K + ++D ++ Y +++ R ++ + + Sbjct: 150 GGYRGKASDIAD-HAKEILRIRDRLNRIYQ---NHLTKER--TLEEIEKYMERDYYMDAE 203 Query: 217 EAKKVGLIDVV 227 EA + G++D + Sbjct: 204 EAVEFGIVDKI 214 >gi|119485223|ref|ZP_01619608.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106] gi|119457451|gb|EAW38576.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106] Length = 238 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 83/195 (42%), Gaps = 40/195 (20%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + + ++ + +D + + ++SPGGS AG I+ IQ+V+ Sbjct: 61 RIIFLGTAIDDEIANAVSAQMLFLDAEDPEKDIQLYINSPGGSVTAGMGIYDTIQQVRPD 120 Query: 97 KPVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T + +AAS +L+S + G P + + + Sbjct: 121 --VVTICYGLAASMGAFLLSSGTK-------------GKRMSLPNSRVMIHQ-------- 157 Query: 156 KSSPMKAEPSPFSEVNPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW 213 P+ ++ +A +++ + +++ ++++ P ++ V ++ + Sbjct: 158 ---PLGGTQGQAVDIEIQAREILYHKRILNEI-------LAQNTGQPIERIEVDTERDFF 207 Query: 214 -TGAEAKKVGLIDVV 227 + E+K+ GLID V Sbjct: 208 MSAEESKEYGLIDQV 222 >gi|52145326|gb|AAU29367.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y F++L++ +R + +K ++ ++ G +A ++G+ D V E Sbjct: 3 ESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ + Sbjct: 62 NHKSRSVSMTTNELTE 77 >gi|165933331|ref|YP_001650120.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia rickettsii str. Iowa] gi|165908418|gb|ABY72714.1| ATP-dependent endopeptidase clp proteolytic subunit [Rickettsia rickettsii str. Iowa] Length = 216 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 59 IVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 116 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 117 LLLCGGEK------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 155 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 156 QETLKIKRLLNELYSKHTEQELQHIEKSMERDN------FMSPEEAKKFGLVDNIISSRD 209 Query: 233 VWQSLYA 239 V L Sbjct: 210 VMALLAK 216 >gi|18378982|ref|NP_563657.1| CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase [Arabidopsis thaliana] gi|75313059|sp|Q9S834|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; AltName: Full=Endopeptidase ClpP5; Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana] gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana] gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana] gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease proteolytic subunit ClpP5 [Arabidopsis thaliana] gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis thaliana] gi|332189323|gb|AEE27444.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana] Length = 298 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 79/209 (37%), Gaps = 44/209 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G ++D + ++ ++ + D +++ ++SPGGS AG AIF ++ ++ Sbjct: 124 IIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPD- 182 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L+S + + S + + + + G + + Sbjct: 183 -VSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR------IMIHQPLGG--AQGGQTDIDI 233 Query: 156 KSSP---MKAEPSPFSEV-NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 +++ KA + + ++++ + D + Sbjct: 234 QANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDF------------------------- 268 Query: 212 IWTGAEAKKVGLIDV-VGGQEEVWQSLYA 239 + EAK+ GLID + + Q L A Sbjct: 269 FMSAKEAKEYGLIDGVIMNPLKALQPLAA 297 >gi|294056505|ref|YP_003550163.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221] gi|293615838|gb|ADE55993.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221] Length = 193 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +I + G++ D ++++ E++ + + + +++PGGS AG AI+ ++ + + Sbjct: 27 KIFLWGEVSDKSAKDVTEKLLFLEMEAPGEEITFYINTPGGSITAGMAIYDTMKLISS-- 84 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 P+ V MAAS G ++ C ++ V S VL P + + + V I Sbjct: 85 PIKVVVTGMAASMGSILLCGASKGKRVLYPHSR-----VLIHQPLISGQMVAVAVDIHI- 138 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 K ++ ++D +++ ++ES P ++ +D + T Sbjct: 139 ---------------QAKEMERLRDELNAI-------LAESSGQPLEQIEKDTDRDFYMT 176 Query: 215 GAEAKKVGLIDVV 227 EA GL D + Sbjct: 177 AKEAIDYGLADEI 189 >gi|212640342|ref|YP_002316862.1| ATP-dependent Clp protease proteolytic subunit [Anoxybacillus flavithermus WK1] gi|226706440|sp|B7GL34|CLPP_ANOFW RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|212561822|gb|ACJ34877.1| ATP-dependent Clp protease proteolytic subunit (class III heat-shock protein) [Anoxybacillus flavithermus WK1] Length = 196 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 40/195 (20%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G I+D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K Sbjct: 28 RIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS +L++ + A S + + + + Sbjct: 88 --VSTICIGMAASMGAFLLAAGAKGKRFALPNSE------IMIHQPLGGVQGQA------ 133 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--I 212 +++ + R++SE+ P + +D R Sbjct: 134 ------------------TEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTD-RDNF 174 Query: 213 WTGAEAKKVGLIDVV 227 T +AK+ GLID V Sbjct: 175 MTAEKAKEYGLIDRV 189 >gi|237745591|ref|ZP_04576071.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS] gi|229376942|gb|EEO27033.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS] Length = 207 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 74/197 (37%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + + ++SPGGS AG AI+ +Q ++ + Sbjct: 42 IIFLVGPVTDQNANLIVAQLLFLESENPEKDISLYINSPGGSVSAGMAIYDTMQFIRPQ- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L++ + + S + + + + + Sbjct: 101 -VSTLCTGLAASMGAFLLAAGAKGKRFSLPNSR------IMIHQPSGGAQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR- 211 + + + + ++ +E+ P ++ ++ R Sbjct: 154 REILY----------------LRERLNGIL-----------AENTGKPVEQIARDTE-RD 185 Query: 212 -IWTGAEAKKVGLIDVV 227 + AEAK GLID V Sbjct: 186 NFMSAAEAKDYGLIDEV 202 >gi|145342132|ref|XP_001416147.1| chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901] gi|144576372|gb|ABO94440.1| chloroplast Clp protease, subunit of ClpP peptidase complex [Ostreococcus lucimarinus CCE9901] Length = 251 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ++D ++ ++ + D + + ++SPGGS AG A+F ++ ++ Sbjct: 70 IIRLGGAVDDDSCNLIVAQLLWLDAADPTKDITLYVNSPGGSVTAGMAVFDTMRHIRPN- 128 Query: 98 PVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L++ + S + + + + + Sbjct: 129 -VSTVCVGLAASMGAFLLASGHPGKRYSLPNSR------IMIHQPLGGAQGQAADIEIQA 181 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + K+ + + + + ++ V++ + F Sbjct: 182 NEIM--HHKSTLNGY--LAEFTKKPLETVMEDTDRDF----------------------F 215 Query: 213 WTGAEAKKVGLIDVV 227 + EA + GLID + Sbjct: 216 MSAKEAVEYGLIDAI 230 >gi|218440073|ref|YP_002378402.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp. PCC 7424] gi|218172801|gb|ACK71534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece sp. PCC 7424] Length = 229 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 83/194 (42%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ + +D + + ++SPGGS YAG AI+ +Q+++ Sbjct: 51 RIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQIYINSPGGSVYAGLAIYDTMQQIRPD 110 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A ++ + + + + V I Sbjct: 111 --VVTICFGLAASMGAFLLSGGAKGKRMALPSAR------MMIHQPIGGAQGQA-VEIDI 161 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K + ++ +++ L++E PYD+ ++ + Sbjct: 162 ----------------QAKEILYIKQRLNT-------LLAEHTGQPYDRIAEDTERDFYM 198 Query: 214 TGAEAKKVGLIDVV 227 + +AK GLID V Sbjct: 199 SAYDAKNYGLIDQV 212 >gi|171692433|ref|XP_001911141.1| hypothetical protein [Podospora anserina S mat+] gi|170946165|emb|CAP72966.1| unnamed protein product [Podospora anserina S mat+] Length = 254 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 75/192 (39%), Gaps = 28/192 (14%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I+D S ++ ++ + D+ + + ++SPGG +G AI+ + +K+ Sbjct: 66 IVCLNGAIDDTVSASIVAQLLWLESDNPDKPITMYINSPGGEVSSGLAIYDTMTYIKS-- 123 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS ++ A S SI V + + + + Sbjct: 124 PVSTVCVGGAASMAAILLIGGEPGKRYALPHS---SIMVHQPLGGTRGQASDILIYANQI 180 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + +++Q ++ S+ F + ++ N ++ L T Sbjct: 181 ------------QRLRDQINKIVQSHINKSFG-FEKYDMQAINDMMERDKYL------TA 221 Query: 216 AEAKKVGLIDVV 227 EAK G+ID + Sbjct: 222 EEAKDFGIIDEI 233 >gi|229162732|ref|ZP_04290689.1| Translocation-enhancing protein tepA [Bacillus cereus R309803] gi|228620614|gb|EEK77483.1| Translocation-enhancing protein tepA [Bacillus cereus R309803] Length = 249 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGSALRKLNEL 234 >gi|225620674|ref|YP_002721932.1| membrane-bound serine protease NfeD [Brachyspira hyodysenteriae WA1] gi|225215494|gb|ACN84228.1| NfeD, Membrane-bound serine protease (ClpP class) [Brachyspira hyodysenteriae WA1] Length = 444 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 21/220 (9%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + I+ D A +I+ L +PGG + +I I + + PV+ +++ A SAG Sbjct: 48 IKNSIDEA-NDKKADLIILELDTPGGLLSSALSIKNYIME--SNVPVVVYINKNALSAGA 104 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 LIS ++ I ++ S++G Y+ K + S M+A +E Sbjct: 105 LISLSAKEIYMSDGSVIG----AATPVYLNGNEPKKAGEKEV---SAMRAAMRSSAETTK 157 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 K + + +VD + + L +S I D +L+ + EA + + D Sbjct: 158 KNAKAAEAMVDET----IILTKKSDGIDLDDKTLLT----LSADEAVSINIADKKANS-- 207 Query: 233 VWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLL 272 + L ++ I + L N + S+L Sbjct: 208 -INEILELKNIENAEIINIEEDVYDSVLKFLLNPFVLSIL 246 >gi|89898588|ref|YP_515698.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila felis Fe/C-56] gi|116243111|sp|Q253I5|CLPP2_CHLFF RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|89331960|dbj|BAE81553.1| ATP-dependent Clp endopeptidase ATP-binding proteolytic subunit 1 [Chlamydophila felis Fe/C-56] Length = 196 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 41/166 (24%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AGYLISCAS-NIIVAAET 126 ++ ++SPGGS AG A++ I+ + + PV T V +AAS L CA+ A Sbjct: 58 IVFVINSPGGSVDAGFAVWDQIKMMTS--PVTTVVTGLAASMGSVLSLCAAPGRRFATPH 115 Query: 127 SLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 S + SIG P + L + + + + K + E + ++++ + Sbjct: 116 SRIMIHQPSIG----GP-ITGQATDLDIHAREILKTK-KRIVDVYVEATGQPREVIEKAI 169 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D R++ W T EAK GL+D + Sbjct: 170 D-------------RDM-------------WMTADEAKDFGLLDGI 189 >gi|218510664|ref|ZP_03508542.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli Brasil 5] gi|327192437|gb|EGE59394.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CNPAF512] Length = 203 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDTVSALVCAQLLFLEAENPNKPINLYINSPGGVVTSGLAMYDTMRFIRA-- 90 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEPGGRAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + + + SY F + D R T Sbjct: 148 ----LKTKQRMTR--------LYAEHCGRSYEDFEH------GMDRD--------RFMTA 181 Query: 216 AEAKKVGLIDVV 227 EA + GLID + Sbjct: 182 EEALEWGLIDRI 193 >gi|126733145|ref|ZP_01748892.1| Clp protease, putative [Roseobacter sp. CCS2] gi|126716011|gb|EBA12875.1| Clp protease, putative [Roseobacter sp. CCS2] Length = 206 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D SQ ++ ++ + ++ + + ++SPGG +G +I+ +Q ++ + Sbjct: 37 IIFVNGPVHDGMSQLIVAQLLHLESENPKKEISMYINSPGGVVTSGLSIYDTMQYIRPK- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A GS G+ F P + + + S Sbjct: 96 -VSTLVIGQAASMGSLLLTA------------GSEGMRFSLPNSRVMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGA 216 + + + ++ Q ++ ++ Y + K L + Sbjct: 135 GGYQGQATDI-MIHAAETQKLKTRLNEIY-------VKHTGNTLKKVEAALERDNFMSPE 186 Query: 217 EAKKVGLIDVV 227 EAK+ GLID + Sbjct: 187 EAKEWGLIDEI 197 >gi|284047279|ref|YP_003397619.1| endopeptidase Clp [Conexibacter woesei DSM 14684] gi|283951500|gb|ADB54244.1| Endopeptidase Clp [Conexibacter woesei DSM 14684] Length = 194 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 65/176 (36%), Gaps = 31/176 (17%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + D+ + + ++SPGGS AG AI+ +Q ++ V T +A S G Sbjct: 45 VVAQLLHLESVDADKDINLYINSPGGSVSAGFAIYDTMQLIRPD--VATICVGIAMSMGS 102 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 + C G+ G P L+ S + + + ++ Sbjct: 103 FLLCG------------GASGKRMSLPN-SRILNHQP-------SGGFQGQATDIQ-IHA 141 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTGAEAKKVGLIDVV 227 + + ++ Y P ++ + R +T +A + GLID + Sbjct: 142 EEALAARRRLEELYAL-------HTGQPIERIHDDMERDRYFTPEQAVEYGLIDKI 190 >gi|16080507|ref|NP_391334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221311403|ref|ZP_03593250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221315730|ref|ZP_03597535.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320645|ref|ZP_03601939.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. subtilis str. JH642] gi|221324930|ref|ZP_03606224.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. subtilis str. SMY] gi|321313004|ref|YP_004205291.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis BSn5] gi|3287962|sp|P80244|CLPP_BACSU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Caseinolytic protease; AltName: Full=Endopeptidase Clp; AltName: Full=Stress protein G7 gi|1945673|emb|CAB08043.1| hypothetical protein [Bacillus subtilis] gi|2635967|emb|CAB15459.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. subtilis str. 168] gi|2668494|gb|AAC46381.1| ClpP [Bacillus subtilis] gi|291485999|dbj|BAI87074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis subsp. natto BEST195] gi|320019278|gb|ADV94264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis BSn5] Length = 197 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K + Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPK- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + + + Sbjct: 88 -VSTICIGMAASMGAFLLAAGEKGKRYALPNSEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + ++++E P + +D + + Sbjct: 134 -----------------TEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKS 176 Query: 215 GAEAKKVGLIDVV 227 EA + GLID + Sbjct: 177 AEEALEYGLIDKI 189 >gi|297843050|ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata] gi|297335248|gb|EFH65665.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata] Length = 298 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 79/209 (37%), Gaps = 44/209 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G ++D + ++ ++ + D +++ ++SPGGS AG AIF ++ ++ Sbjct: 124 IIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPD- 182 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L+S + + S + + + + G + + Sbjct: 183 -VSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR------IMIHQPLGG--AQGGQTDIDI 233 Query: 156 KSSP---MKAEPSPFSEV-NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 +++ KA + + ++++ + D + Sbjct: 234 QANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDF------------------------- 268 Query: 212 IWTGAEAKKVGLIDV-VGGQEEVWQSLYA 239 + EAK+ GLID + + Q L A Sbjct: 269 FMSAKEAKEYGLIDGVIMNPLKALQPLAA 297 >gi|212212151|ref|YP_002303087.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii CbuG_Q212] gi|212010561|gb|ACJ17942.1| non-proteolytic membrane spanning protein, peptidase family S49 [Coxiella burnetii CbuG_Q212] Length = 458 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 14/160 (8%) Query: 3 FVLKKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVAR-IAIRGQI--EDSQELIERIER 59 + K+I R + + T ++ + ++N+ +A I I+G I + +++ Sbjct: 2 YCRKRIFIRCFYILIFTFGLLGIASHIIAQNNTRRLAILIDIKGGIGPATADFFHRSLKQ 61 Query: 60 ISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLISC 116 + A +I+ L +PGG A A I + I + + PVI V AASAG + Sbjct: 62 ATE-KKAQVIILQLDTPGGLATAMRDIIKDI--LASPIPVIGYVAPSGAHAASAGTYVLY 118 Query: 117 ASNIIVAAETSLVG-----SIGVLFQYPYVKPFLDKLGVS 151 A++I A + +G +IG K K G Sbjct: 119 ATHIAAMAPGTNLGAATPIAIGTPGGSSPEKGNEKKEGAK 158 >gi|315122830|ref|YP_004063319.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496232|gb|ADR52831.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 216 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 31/190 (16%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + I GQIED + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 44 IVFITGQIEDHMAALICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP-- 101 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G L+ A G+ F P + L + S Sbjct: 102 PVSTLCIGQAASMGSLLLAAGKK------------GMRFALPNARIMLHQP--------S 141 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 + S E + + + ++ +++ Y V E D+ + + Sbjct: 142 GGFSGQASDI-ERHARDIIKIKHRLNNIYVKHCGRVYEEVEQTLDRDC------FMSAED 194 Query: 218 AKKVGLIDVV 227 A GLID V Sbjct: 195 AHAWGLIDKV 204 >gi|229117283|ref|ZP_04246661.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-3] gi|228666183|gb|EEL21647.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-3] Length = 249 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAIAEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG Q L L Sbjct: 216 GLIDDVGGIGSALQKLNEL 234 >gi|120610146|ref|YP_969824.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax citrulli AAC00-1] gi|326316315|ref|YP_004233987.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|166201794|sp|A1TM62|CLPP_ACIAC RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|120588610|gb|ABM32050.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax citrulli AAC00-1] gi|323373151|gb|ADX45420.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 202 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 74/194 (38%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D ++ ++ + ++ + ++SPGGS AG AI+ +Q + K Sbjct: 37 IVFLIGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFI---K 93 Query: 98 PVITEVH-EMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P ++ + AAS +L++ + + S + + + + Sbjct: 94 PDVSTMCLGFAASMGAFLLAAGAKGKRFSLPNSK------IMIHQVLGGARGQA------ 141 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 +++ + + R+++E P +K ++ + Sbjct: 142 ------------------TDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERDYFL 183 Query: 214 TGAEAKKVGLIDVV 227 T EAK+ GL+D V Sbjct: 184 TADEAKEYGLVDQV 197 >gi|78223080|ref|YP_384827.1| ATP-dependent Clp protease proteolytic subunit [Geobacter metallireducens GS-15] gi|90101408|sp|Q39UH2|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter metallireducens GS-15] Length = 199 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ +Q +K Sbjct: 28 IIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMQYIKA-- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T AAS G L+ SL S I + + + + Sbjct: 86 PVSTICVGQAASMGALLLSGGEK--GKRFSLTHSRIMIHQPLGGFQGQATDIHIH----- 138 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + + M+ ++ ++E+ +K ++ + +G Sbjct: 139 ---------------AQEILKMKKRLNEI-------IAENSGQALEKVEADTERDYFMSG 176 Query: 216 AEAKKVGLIDVV 227 EAK G+ID + Sbjct: 177 EEAKSYGIIDAI 188 >gi|255767379|ref|NP_389561.3| protein export-enhancing factor [Bacillus subtilis subsp. subtilis str. 168] gi|321315446|ref|YP_004207733.1| protein export-enhancing factor [Bacillus subtilis BSn5] gi|238054399|sp|Q99171|TEPA_BACSU RecName: Full=Translocation-enhancing protein TepA gi|225185006|emb|CAB13552.3| protein export-enhancing factor [Bacillus subtilis subsp. subtilis str. 168] gi|291484234|dbj|BAI85309.1| translocation-enhancing protein [Bacillus subtilis subsp. natto BEST195] gi|320021720|gb|ADV96706.1| protein export-enhancing factor [Bacillus subtilis BSn5] Length = 245 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV + Y+ +++ V + S+ Sbjct: 126 GVPIAVSCDYSYIAETATMTIHPVRLTGLVIGVPQTFEYLDKMQERV-VKFVTSHSN--- 181 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + + F L+ N+ D + G +A K Sbjct: 182 --------ITEE--------------KFKELMFSKGNLTRDIGTNV------VGKDAVKY 213 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID GG + L L Sbjct: 214 GLIDHAGGVGQAINKLNEL 232 >gi|288957681|ref|YP_003448022.1| Clp protease [Azospirillum sp. B510] gi|288958877|ref|YP_003449218.1| ATP-dependent Clp protease [Azospirillum sp. B510] gi|288909989|dbj|BAI71478.1| Clp protease [Azospirillum sp. B510] gi|288911185|dbj|BAI72674.1| ATP-dependent Clp protease [Azospirillum sp. B510] Length = 287 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 39 ARIAIRGQIED------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 A I + G I ++E + I+ + S + V L+SPGG + G AI++A+ + Sbjct: 19 ADIYVYGDIGGWWDGIQAEEFAKEIDAL----SVDTINVRLNSPGGVVFDGVAIYQALAR 74 Query: 93 VKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 K ++ + +AAS +I+ A + I AE + + + Sbjct: 75 HKAN--IVIHIDGIAASIASVIAMAGDEIRIAEGA----------HVMIHKPWS------ 116 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 F+ + + ++ D++D V + + + Sbjct: 117 --------------FAIGDAEVMRKEADILDQLESGIVDIYAARTGQERKALVDWVAAET 162 Query: 213 WTGAE-AKKVGLIDVV 227 W GA+ AK G D V Sbjct: 163 WFGAQAAKDAGFADTV 178 >gi|269123536|ref|YP_003306113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptobacillus moniliformis DSM 12112] gi|268314862|gb|ACZ01236.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptobacillus moniliformis DSM 12112] Length = 192 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I + +I ++ ++ D + + ++SPGG AG I+ + + Sbjct: 29 IIFLSGEINTEMANAIIAQLLFLNAQDKEKDITMYINSPGGMVTAGFGIYDTMNHISCD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV 129 V+T MAAS +L+S + A S V Sbjct: 88 -VVTVCIGMAASMGAFLLSSGTKGKRFALPNSEV 120 >gi|311107208|ref|YP_003980061.1| Clp protease family protein [Achromobacter xylosoxidans A8] gi|310761897|gb|ADP17346.1| Clp protease family protein [Achromobacter xylosoxidans A8] Length = 279 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 87/217 (40%), Gaps = 37/217 (17%) Query: 39 ARIAIRGQIEDSQE----LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 A I+I I ++ + ++RI+ R A + V+++SPGG+ + G AI+ A+++ K Sbjct: 43 ATISIYDAIGETWDGSGVTVKRIQAALRSVGARDVTVNVNSPGGNFFEGVAIYNALREHK 102 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V +V +AASA +I+ A + I+ + S L + + + Sbjct: 103 AK--VTIKVLGLAASAASVIAMAGDDILMGQGSF------LMIH------------NAWA 142 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 V +++ P M Q + + + L D W Sbjct: 143 VAIGNRHDLVDAAAKLEPFDEAMAQVY------------AARTGLTSKQAAALMDKETWI 190 Query: 215 GA-EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIK 250 GA +A + G + V + + G +++ +++ Sbjct: 191 GADQAVEDGFATGLLDGAAVIEQPQSSGERRALAQVE 227 >gi|126659496|ref|ZP_01730629.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. CCY0110] gi|126619230|gb|EAZ89966.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. CCY0110] Length = 201 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS YAG AI+ +Q+++ Sbjct: 23 RIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYINSPGGSVYAGLAIYDTMQQIRPD 82 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A +S + + + + V I+ Sbjct: 83 --VVTICFGLAASMGAFLLSGGTKGKRMALPSSR------IMIHQPLGGAQGQA-VEIEI 133 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K + ++ ++ ++E PYDK ++ + Sbjct: 134 ----------------QAKEILYIKKRLNDM-------LAEHTGQPYDKIATDTERDFFM 170 Query: 214 TGAEAKKVGLIDVV 227 + EA GLID V Sbjct: 171 SAQEAVDYGLIDKV 184 >gi|94987236|ref|YP_595169.1| protease subunit of ATP-dependent Clp proteases [Lawsonia intracellularis PHE/MN1-00] gi|116243147|sp|Q1MQ79|CLPP_LAWIP RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|94731485|emb|CAJ54848.1| Protease subunit of ATP-dependent Clp proteases [Lawsonia intracellularis PHE/MN1-00] Length = 209 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 39/180 (21%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + ++ + D + + ++SPGGS AG AI+ + + V T AAS G Sbjct: 49 ICAQLLFLESQDPEKEIYLYINSPGGSVTAGLAIYDTMNYITPN--VATVCMGRAASMGA 106 Query: 113 LISCASNI--IVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 L+ A A S V + + + + + + Sbjct: 107 LLLAAGEKNMRYALPNSQV------MIHQPLGGYQGQATDIDIHAREILR---------- 150 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 Q + +++ + V++ D T +AK GLID V Sbjct: 151 ------MRQRLNEILMEQTGQSLEKVAQ------DTERDYF----MTAEDAKAYGLIDKV 194 >gi|302804055|ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii] gi|300148617|gb|EFJ15276.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii] Length = 206 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + I G I D ++ ++ + ++ + + ++SPGG AG AI+ +Q +++ Sbjct: 32 IVCIHGPIADDTASLVVAQLLYLESENPLKPIHLYINSPGGVVTAGLAIYDTMQYIRS-- 89 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G L+ A G P + + + S Sbjct: 90 PVSTLCVGQAASMGSLLLAAGEP------------GQRRSLPNARVMVHQ----PSGGAS 133 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 E+ M+ ++ Y ++ +K + + + Sbjct: 134 GQASDIAIQAREILD-----MRSRLNKLY-------AKHTGSSIEKIDQSMERDHFMSPE 181 Query: 217 EAKKVGLIDVV 227 EAK+ GLID V Sbjct: 182 EAKEFGLIDEV 192 >gi|302673690|ref|XP_003026531.1| hypothetical protein SCHCODRAFT_86223 [Schizophyllum commune H4-8] gi|300100214|gb|EFI91628.1| hypothetical protein SCHCODRAFT_86223 [Schizophyllum commune H4-8] Length = 245 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G I D+ ++ ++ + ++++ + + ++SPGGS AG AI+ +Q V + Sbjct: 69 VVMLYGPIRDTDSALIVSQLLFLEAEETSKPIHLYINSPGGSVTAGLAIYDTMQYVSS-- 126 Query: 98 PVITEVHEMAASAGYLISCASNI 120 P+ T AAS G L+ A Sbjct: 127 PIHTYCIGCAASMGSLLLAAGEK 149 >gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501] gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501] Length = 262 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 81/200 (40%), Gaps = 38/200 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS YAG AI+ +Q+++ Sbjct: 84 RIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPD 143 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A +S + + + + V I+ Sbjct: 144 --VVTICFGLAASMGAFLLSGGTKGKRMALPSSR------IMIHQPLGGAQGQA-VEIEI 194 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K + ++ ++ ++E P+D ++ + Sbjct: 195 ----------------QAKEILYIKKRLNDM-------LAEHTGQPFDTIAADTERDFFM 231 Query: 214 TGAEAKKVGLIDVVGGQEEV 233 + EA GLID V + ++ Sbjct: 232 SAQEAVDYGLIDKVISRSDL 251 >gi|281487009|gb|ADA71056.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 ESLQREVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|49483694|ref|YP_040918.1| phage protease [Staphylococcus aureus subsp. aureus MRSA252] gi|49241823|emb|CAG40515.1| phage protease [Staphylococcus aureus subsp. aureus MRSA252] Length = 257 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 76 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 77 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 132 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S + + ++ ++D+ Sbjct: 133 DLLEKTDAVSNSAYLD------KAKDLDQEHLKQMLDT---------------------- 164 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 W T EA GLID + G E+ S+ Sbjct: 165 ----ETWLTAEEALSFGLIDEILGANEIAASISK 194 >gi|281487027|gb|ADA71065.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 5 LQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|307611846|emb|CBX01559.1| hypothetical protein LPW_32461 [Legionella pneumophila 130b] Length = 501 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 94/252 (37%), Gaps = 43/252 (17%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRD 63 K ++T Y+ + L +V S + + I+G I + L I+ Sbjct: 65 KFMQTSYIFIFLTLFLLVGLQTSFAA-----KIVELNIKGPIGPATADYLERGIKSAQDA 119 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQK-VKNRKPVITEV---HEMAASAGYLISCASN 119 D +++ + +PGG ++ IQ + + P++T V AASAG + AS Sbjct: 120 DL---IVILIDTPGGL---YDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYAST 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 + A + +G+ + E + K M+ Sbjct: 174 LAAMAPGTQMGAASPVSLGTGFSE------------------------GEKDEKKKSTME 209 Query: 180 DVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSL 237 + V +R +++ R D +++G+ T EA G+++ + ++++ + Sbjct: 210 NKVTHDAVATIRSLAQLRGRDLDFAEKAVTEGKSITANEALSKGVVNYIAKNRDDLLSQI 269 Query: 238 YALGVDQSIRKI 249 + V Q+ + I Sbjct: 270 NGIKVSQNNKTI 281 >gi|255261268|ref|ZP_05340610.1| Clp protease [Thalassiobium sp. R2A62] gi|255103603|gb|EET46277.1| Clp protease [Thalassiobium sp. R2A62] Length = 209 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D SQ ++ ++ + ++ + + + ++SPGG +G +I+ +Q +K + Sbjct: 37 IIFLNGPVHDGMSQLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPK- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A G+ F P + + + S Sbjct: 96 -VSTLVIGQAASMGSLLLTAGEK------------GMRFSLPNSRVMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGA 216 + + + ++ Q ++D ++S Y K L + Sbjct: 135 GGYQGQATDI-MIHAAETQKLKDRLNSIY-------VRHTGQTLKKVEAALERDNFMSAE 186 Query: 217 EAKKVGLIDVV 227 +AK GLID + Sbjct: 187 DAKDWGLIDEI 197 >gi|281487017|gb|ADA71060.1| putative capsid protein [Wolbachia phage WO] gi|281487019|gb|ADA71061.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +Q VD Y FV+L++ +R + +K ++ ++ G +A ++GL D Sbjct: 5 LQKEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|224373739|ref|YP_002608111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia profundicola AmH] gi|223589486|gb|ACM93222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia profundicola AmH] Length = 196 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I ++G+I D S ++ ++ + ++ + + ++SPGG +G AI+ + +K Sbjct: 30 IIMLQGEINDHVSSIIVAQMLFLEAENPEKDIYLYINSPGGVVTSGMAIYDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T AAS +L+S + A + + + +P G + Sbjct: 89 -VVTICMGQAASMGAFLLSSGAKGKRFALPHAR------IMIH---QPLGGAQGQATDI- 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E++ K + M+ ++ ++E+ K ++ + + Sbjct: 138 -------------EIHAKEILRMKKELNKI-------LAENTGQSVRKIERDTERDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 EA K GLID V Sbjct: 178 AEEAMKYGLIDKV 190 >gi|116492258|ref|YP_803993.1| ATP-dependent Clp protease proteolytic subunit [Pediococcus pentosaceus ATCC 25745] gi|122266278|sp|Q03GX1|CLPP_PEDPA RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|116102408|gb|ABJ67551.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pediococcus pentosaceus ATCC 25745] Length = 197 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 77/195 (39%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + DS + + ++SPGG AG AI+ + +K+ Sbjct: 29 IIMLSGPIDDDLANSIISQLLFLDAQDSEKDIYLYINSPGGVVTAGLAIYDTMNFIKSD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T V MAAS +++ + A S V + + ++ ++ Sbjct: 88 -VQTIVMGMAASMASVLASSGTKGKRFALPHSEV------MIHQPSGGAQGQQTEIEIAA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + K + +E + + ++ + NI ++ L Sbjct: 141 EQILKTR-KELNTILAENSGQPLEKI-------------------NIDTERDNYL----- 175 Query: 213 WTGAEAKKVGLIDVV 227 + +A + GLID + Sbjct: 176 -SAQDAVEYGLIDGI 189 >gi|320094140|ref|ZP_08025953.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp. oral taxon 178 str. F0338] gi|319978942|gb|EFW10472.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp. oral taxon 178 str. F0338] Length = 201 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 71/194 (36%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + + ++ ++ +D + + ++SPGGS AG A++ +Q + K Sbjct: 27 IIWLGGEVRDENANTICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAVYDTMQYI---K 83 Query: 98 PVITEVH-EMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P + V +AAS G + + A + V + L G S Sbjct: 84 PDVVTVGMGLAASMGQFLLTAGAPGKRYITPHTRV----------LLHQPLGGAGGSATE 133 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ + D++ + ++ ++ +D W Sbjct: 134 IRINA--------------------DLILGMKKELAEITAQRTGKSVEQIEADADRDHWF 173 Query: 214 TGAEAKKVGLIDVV 227 T EA + G +D + Sbjct: 174 TAREALEYGFVDQL 187 >gi|319405542|emb|CBI79161.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella sp. AR 15-3] Length = 210 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 75/210 (35%), Gaps = 41/210 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED+ + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFINGPVEDNMAMLVCAQLLFLEAENPKKEINLYINSPGGMVTSGMAIYDTMQFIRPS- 95 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ + A+ A + + + Sbjct: 96 -VSTLCMGQAASMGSLLLTAGAAGRRFALPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S + + S E + + + M+ ++ Y E D+ T Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIYVQHTGQNYEVIEKTLDRD------HFMTA 185 Query: 216 AEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 EAK+ GLID +V Q ++ Sbjct: 186 EEAKQFGLID------DVIQYRAETEKEEK 209 >gi|301168948|emb|CBW28543.1| atp-dependent clp protease proteolytic subunit [Haemophilus influenzae 10810] Length = 662 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 39/203 (19%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ S A I+I +I +Q+ + + + + + + + SPGG + G A Sbjct: 9 NINAKSTDTADISIYDEIGGWGISAQQFAKDFKALGNN--LKQINLHIHSPGGDVFDGIA 66 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFL 145 I+ ++ V + +AAS +I+ A N ++ E ++ + + Sbjct: 67 IYNLLKNHPAN--VTVYIDGLAASMASVIAMAGNEVIMPENAM------MMIH------- 111 Query: 146 DKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL 205 G+ + + ++ D++D + + + ++ Sbjct: 112 KPWGI-----------------QGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELA 154 Query: 206 VLSDGRIWT-GAEAKKVGLIDVV 227 + W G E + G D + Sbjct: 155 EMLSAETWLNGKECVEQGFADKL 177 >gi|225437581|ref|XP_002277104.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743987|emb|CBI36957.3| unnamed protein product [Vitis vinifera] Length = 289 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 77/196 (39%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G ++D + ++ ++ + D +++ ++SPGGS AG AIF ++ ++ Sbjct: 112 IIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPD- 170 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L+SC + + S + + + + G + + Sbjct: 171 -VSTVCVGLAASMGAFLLSCGTKGKRYSLPNSR------IMIHQPLGG--AQGGQTDIDI 221 Query: 156 KSSP---MKAEPSPF-SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 +++ KA + + S ++++ + D + Sbjct: 222 QANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDF------------------------- 256 Query: 212 IWTGAEAKKVGLIDVV 227 + EAK+ GLID V Sbjct: 257 FMSAKEAKEYGLIDGV 272 >gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL2A] gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL1A] gi|115311347|sp|Q46JF7|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prochlorococcus marinus str. NATL2A] gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL1A] Length = 200 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ ++ VK+ ++T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMKYVKSD--LVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L+S + +A S + + + + I+ Sbjct: 102 MGAFLLSAGTKGKRLALPHSR------IMIHQPLGGTAQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A ++++ + + + ++E Y+K +D + + EAK GLID Sbjct: 143 -----EAREILR--IKEMLN---KSMAEMTGQTYEKIEKDTDRDYFLSAEEAKNYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|300721991|ref|YP_003711271.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Xenorhabdus nematophila ATCC 19061] gi|297628488|emb|CBJ89055.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Xenorhabdus nematophila ATCC 19061] Length = 207 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGSFLLAAGAEGKRFCLPNSRV------MIHQPLGGFQGQATDIQIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ P DK ++ R Sbjct: 154 QEIL----------------KVKARMNELM-----------AKHTGQPLDKIEEDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA GL+D + Sbjct: 187 FLSASEAVDYGLVDSI 202 >gi|52145342|gb|AAU29375.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 ESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|326382826|ref|ZP_08204516.1| ATP-dependent Clp protease proteolytic subunit [Gordonia neofelifaecis NRRL B-59395] gi|326198416|gb|EGD55600.1| ATP-dependent Clp protease proteolytic subunit [Gordonia neofelifaecis NRRL B-59395] Length = 238 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 38/202 (18%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + L +I ++ +D + + ++SPGGS AG AIF +Q Sbjct: 69 RIIFLGTQVDDDIANRLCAQILLLAAEDPTKDINLYINSPGGSVTAGMAIFDTMQLAPCD 128 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS +L++ + A + + + G+ Sbjct: 129 --VATYAMGMAASMGQFLLAAGAKGKRHALPHAR------IMMH------QPSAGI---G 171 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ + + + + ++ F P +K +D W Sbjct: 172 GTAADIA--------IQAEQFAATKREMNRLNAEFT-------GQPLEKIEADADRDNWF 216 Query: 214 TGAEAKKVGLIDVVGGQEEVWQ 235 T EAK+ G +D V Sbjct: 217 TAEEAKEYGFVDHVVTSAGAIA 238 >gi|221313882|ref|ZP_03595687.1| TepA [Bacillus subtilis subsp. subtilis str. NCIB 3610] Length = 245 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV + Y+ +++ V + S+ Sbjct: 126 GVPIAVSCDYSYIAETATVTIHPVRLTGLVIGVPQTFEYLDKMQERV-VKFVTSHSN--- 181 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 + + F L+ N+ D + G +A K Sbjct: 182 --------ITEE--------------KFKELMFSKGNLTRDIGTNV------VGKDAVKY 213 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID GG + L L Sbjct: 214 GLIDHAGGVGQAINKLNEL 232 >gi|254455562|ref|ZP_05068991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus Pelagibacter sp. HTCC7211] gi|207082564|gb|EDZ59990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus Pelagibacter sp. HTCC7211] Length = 203 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQI D + + ++ + +D + + ++SPGG AG I+ +Q VK Sbjct: 38 IIFLTGQINDNVASLVTAQLLFLEAEDPKKEIYLYINSPGGLVTAGLGIYDTMQYVKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T AAS +L++ + + S V V + + + + V Sbjct: 97 -ISTLCIGQAASMGSFLLAAGTKGKRFSLPNSRV---MVHQPSAGFQGQVTDIEIHANEV 152 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWT 214 S ++ ++ Y S+ D+ L T Sbjct: 153 SS--------------------LKKRLNEIY-------SKHTGKSVDEVKAALERDNFMT 185 Query: 215 GAEAKKVGLIDVV 227 AK GLID V Sbjct: 186 ADVAKDFGLIDEV 198 >gi|304440714|ref|ZP_07400598.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370901|gb|EFM24523.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 194 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G+I + + ++ ++ + +D + + ++SPGGS AG AIF + +K Sbjct: 29 IIFISGEINNVTADLVVAQLLFLESEDPNKDIQIYINSPGGSVSAGFAIFDTMNYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ A S + + + + + Sbjct: 88 -VSTICIGMAASMGAFLLAAGKKGKRFALPNSE------IMIHQPLGGAQGQASDIMIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + Q + ++ +E P +K +D Sbjct: 141 EKII----------------EIRQRINKIL-----------AEETGQPLEKIEHDTDRDY 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 174 FLSADEAKEYGLIDNV 189 >gi|229104359|ref|ZP_04235028.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-28] gi|228679057|gb|EEL33265.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-28] Length = 249 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG Q L L Sbjct: 216 GLIDDVGGIGSALQKLNEL 234 >gi|51892696|ref|YP_075387.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium thermophilum IAM 14863] gi|51856385|dbj|BAD40543.1| ATP-dependent clp protease proteolytic subunit [Symbiobacterium thermophilum IAM 14863] Length = 260 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 87/243 (35%), Gaps = 55/243 (22%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 ++ V SP++ + I GQ+E + +I ++ + + L++ L+ Sbjct: 47 GTTSVPQVSPNIHLLTIIGQVEGHLALPPQNKTTKYEHIIPQLVAVEQSPEIEGLLLVLN 106 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI + + KP ++ V S G I+ ++ A T+ Sbjct: 107 TVGGDVEAGLAIAEMVASLS--KPSVSLVLGGGHSIGVPIAVSTTYSFIAATA------T 158 Query: 135 LFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVS 194 + +P + + + + + MQD V VR V Sbjct: 159 MTIHP----------IRLTGLVIGV---------PQTYEYLDKMQDRV-------VRFVV 192 Query: 195 ESRNIPYDKTLVL--SDGR-------IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + I ++ L G + G +A + GLID VGG + L L ++ Sbjct: 193 SNSRISEERFRELMFRTGELARDVGTVVVGPDAVREGLIDEVGGLSDAVAKLNQLIAERK 252 Query: 246 IRK 248 + Sbjct: 253 RTR 255 >gi|254421271|ref|ZP_05034989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus sp. PCC 7335] gi|196188760|gb|EDX83724.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus sp. PCC 7335] Length = 269 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 33/180 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ + +D + + ++SPGGS AG AI+ +Q+++ V+T +AAS Sbjct: 106 ADSIVAQLLFLDAEDPEKDVQLYINSPGGSVTAGMAIYDTMQQIRPD--VVTICFGLAAS 163 Query: 110 -AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 +L+S + G P + + + Sbjct: 164 MGAFLLSGGAK-------------GKRMSLPSARIMIHQ----PSGGAQGQSADI----- 201 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 E+ + + ++ ++ +++ + ++ + + EAK+ GLID V Sbjct: 202 EIQAREILYLKKRLNEM-------LADHTGQDISRIEADTERDFFMSAEEAKEYGLIDQV 254 >gi|291463558|pdb|3KTG|A Chain A, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463559|pdb|3KTG|B Chain B, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463560|pdb|3KTG|C Chain C, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463561|pdb|3KTG|D Chain D, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463562|pdb|3KTG|E Chain E, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463563|pdb|3KTG|F Chain F, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463564|pdb|3KTG|G Chain G, Structure Of Clpp From Bacillus Subtilis In Monoclinic Crystal Form gi|291463565|pdb|3KTH|A Chain A, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form gi|291463566|pdb|3KTH|B Chain B, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form gi|291463567|pdb|3KTH|C Chain C, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form gi|291463568|pdb|3KTH|D Chain D, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form gi|291463569|pdb|3KTH|E Chain E, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form gi|291463570|pdb|3KTH|F Chain F, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form gi|291463571|pdb|3KTH|G Chain G, Structure Of Clpp From Bacillus Subtilis In Orthorombic Crystal Form Length = 199 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K + Sbjct: 28 IIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPK- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + + + Sbjct: 87 -VSTICIGMAASMGAFLLAAGEKGKRYALPNSEV------MIHQPLGGAQGQA------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + ++++E P + +D + + Sbjct: 133 -----------------TEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKS 175 Query: 215 GAEAKKVGLIDVV 227 EA + GLID + Sbjct: 176 AEEALEYGLIDKI 188 >gi|281487021|gb|ADA71062.1| putative capsid protein [Wolbachia phage WO] gi|281487023|gb|ADA71063.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 + +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 3 ESLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942] Length = 302 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 42/196 (21%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + ++ ++ + +D + + ++SPGGS AG AI+ +Q+V Sbjct: 124 RIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPD 183 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T +AAS +L+S + +A ++ + + + + V I+ Sbjct: 184 --VATICFGLAASMGAFLLSGGAQGKRMALPSAR------IMIHQPLGGAQGQA-VDIEI 234 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMM--QDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 +A +++ + ++ L+++ P +K V +D Sbjct: 235 ------------------QAREILYHKSTLND-------LLAQHTGQPLEKIEVDTDRDF 269 Query: 213 W-TGAEAKKVGLIDVV 227 + + EAK GLID V Sbjct: 270 FMSPEEAKAYGLIDQV 285 >gi|17488507|ref|NP_510985.1| Clp protease [Listeria phage 2389] gi|254933557|ref|ZP_05266916.1| clp protease [Listeria monocytogenes HPB2262] gi|17402412|emb|CAC85560.1| Clp protease [Listeria phage PSA] gi|293585121|gb|EFF97153.1| clp protease [Listeria monocytogenes HPB2262] gi|332311661|gb|EGJ24756.1| Clp protease [Listeria monocytogenes str. Scott A] Length = 248 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 36/204 (17%) Query: 32 EDNSPHVARIAIRGQIEDS---QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 +P +A + + G I ++ + S + + V ++S GG + AI Sbjct: 18 SSENPEIADLYLYGSIGSGWFDDITSSEVQNFLKTSSVSQINVHVNSGGGDVFESIAIHN 77 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 ++ + + + +A S +I+ A + I+ ++ + + Sbjct: 78 LLKAHPAK--ISIYIDALAGSGASVIAMAGDEIIMPSNAM------MMIH---------- 119 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 ++ + F +V + + V SY R V E ++ + L Sbjct: 120 --KAWTIAAGN----ADEFRKV-ANDMDKIDHAVTESYTE--RFVGER-----EELVTLL 165 Query: 209 DGRIW-TGAEAKKVGLIDVVGGQE 231 W T E +G D +G E Sbjct: 166 TNEEWLTAEECVTLGFCDSIGEIE 189 >gi|217071428|gb|ACJ84074.1| unknown [Medicago truncatula] Length = 297 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 80/244 (32%), Gaps = 61/244 (25%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + DD + + ++SPGGS AG ++ A++ K V T +A Sbjct: 99 MTADFVISQLLFLDADDPTKDIKLFINSPGGSVTAGMGVYDAMKLCKAD--VSTVCLGLA 156 Query: 108 AS-AGYLISCASN-IIVAAETSLV------GSIG---VLFQYPYVKPFLDKLGVSIKSVK 156 AS +L++ + S V GS G + K+ ++ Sbjct: 157 ASMGAFLLAAGTKGKRYCMPNSRVMIHQPLGSAGGKATEMSIRARELMYHKIKINK---- 212 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA 216 S + + Q +D+ F+ W G Sbjct: 213 ------ILSRITGKPEE-----QIELDTDRDNFMNP--------------------WEG- 240 Query: 217 EAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTI 276 K+ GLID +V G + I D PP ++ + +S + + Sbjct: 241 --KEYGLID------DVIDD----GKPGLVAPITDGAPPPKTMLKNIWEIEGNSKGKKKL 288 Query: 277 PLMK 280 P + Sbjct: 289 PSEE 292 >gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter sp. Re1] gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter sp. Re1] Length = 194 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 72/194 (37%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I I+D S + + + S D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIFIGTSIDDTVASLAIAQMLYLESEDPD-KDIRLYINSPGGSVTAGLAIYDTMQYIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T +AAS L++ + A S + + K V I++ Sbjct: 88 --VSTICMGLAASMGAVLLAAGTEGKRYALPNSR------IMIHQPWGGVQGKA-VDIET 138 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K + ++++++ ++ +K +D + Sbjct: 139 H----------------AKEILRLRELLNEI-------LANHTKQSIEKIEKDTDRDYFM 175 Query: 214 TGAEAKKVGLIDVV 227 + EA + GLID V Sbjct: 176 SSKEALEYGLIDEV 189 >gi|325293013|ref|YP_004278877.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp. H13-3] gi|325060866|gb|ADY64557.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp. H13-3] Length = 203 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 35/202 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D+ + ++ + ++ + + ++SPGG +G A++ ++ ++ Sbjct: 33 IIFLNGEVNDAVSALVCAQLLFLEAENPKKPIHLYINSPGGVVTSGLAMYDTMRYIRA-- 90 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G + A A + SI + + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEPGARAALPNA---SILIHQPSGGFQGQASDMLIHAEEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ + SY F + R + ++ Sbjct: 148 RQTKHR------------MTRLYAEHCKRSYDEFEAAMDRDRFMTVEE------------ 183 Query: 216 AEAKKVGLIDVVGGQEEVWQSL 237 A + GLID V E + Sbjct: 184 --ALEWGLIDRVLDVREDVAAA 203 >gi|52843152|ref|YP_096951.1| hypothetical protein lpg2958 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630263|gb|AAU29004.1| transmembrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 501 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 99/246 (40%), Gaps = 45/246 (18%) Query: 12 YVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQELIERIER-ISRDDSATALI 70 ++ L+L L + S+++ + + I+G I + ++ +ER I A ++ Sbjct: 73 FIFLTLFLLIGLQTSFAA-------KIVELNIKGPIGPA--TVDYMERGIKSAQDADLIV 123 Query: 71 VSLSSPGGSAYAGEAIFRAIQK-VKNRKPVITEV---HEMAASAGYLISCASNIIVA-AE 125 + + +PGG ++ IQ + + P++T V AASAG + ++ I A A Sbjct: 124 ILIDTPGGL---YDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYL-MYASTIAAMAP 179 Query: 126 TSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSS 185 + +G+ + E + K M++ V Sbjct: 180 GTQMGAASPVSLGTGFSE------------------------GEKDEKKKSTMENKVTHD 215 Query: 186 YHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYALGVD 243 +R +++ R D +++G+ T EA G+++ + ++++ ++ + V Sbjct: 216 AVATIRSLAQLRGRDPDFAEKAVTEGKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVS 275 Query: 244 QSIRKI 249 Q+ + I Sbjct: 276 QNNKTI 281 >gi|119510658|ref|ZP_01629787.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414] gi|119464709|gb|EAW45617.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414] Length = 210 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 76/197 (38%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + +DS + + ++SPGGS YAG AI+ +Q+++ Sbjct: 33 IIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQIYINSPGGSVYAGMAIYDTMQQIRPD- 91 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V+T +AAS +L++ GS G P + + Sbjct: 92 -VVTICFGLAASMGAFLLAA-------------GSAGKRMSLPDSRIMI----------- 126 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV-----RLVSESRNIPYDKTLVLSDGR 211 + Q + + + +V +L+ P ++ ++ Sbjct: 127 ----------HQPLGGAQGQAIDIEIQAREILYVKAKLNQLLGHHTGQPLERLEADTERD 176 Query: 212 IW-TGAEAKKVGLIDVV 227 + + EAK GLID V Sbjct: 177 FFMSAEEAKNYGLIDQV 193 >gi|116511469|ref|YP_808685.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis subsp. cremoris SK11] gi|123320556|sp|Q030V9|CLPP_LACLS RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|116107123|gb|ABJ72263.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactococcus lactis subsp. cremoris SK11] Length = 199 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 77/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 30 IIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 88 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V+T V MAAS G +I+ + G F P + + + Sbjct: 89 -VLTIVMGMAASMGTIIASSGTK------------GKRFMLPNAEYLIHQ---------- 125 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM + + ++ + + + ++++++ N ++ ++ W Sbjct: 126 -PMGGAGQGTQQT---DMAIVAEQLLKTRKRLEQILADNSNRSLEQIHKDAERDHWMDAK 181 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 182 ETLEYGFIDEI 192 >gi|300954440|ref|ZP_07166892.1| Clp protease [Escherichia coli MS 175-1] gi|300318590|gb|EFJ68374.1| Clp protease [Escherichia coli MS 175-1] Length = 637 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 65/187 (34%), Gaps = 36/187 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +++ E ++ + + + + + SPGG + G AI+ ++ + Sbjct: 23 EIGGFGVTAKQFAEDLKALGD---VSHINLRIHSPGGDVFEGIAIYNLLRNHPAD--ITV 77 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +++ A + +V E ++ + + G+ S Sbjct: 78 YIDGVAASMASVVAMAGDRVVMPENAM------MMIH-------KPWGI------SGGNA 118 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + ++++ K ++ + + + + + W G E K Sbjct: 119 GDMRDYADLLDKVETVL-----------IPAYARKTGKSAQEITAMLEDETWMDGKECLK 167 Query: 221 VGLIDVV 227 G D + Sbjct: 168 HGFADEL 174 >gi|254780272|ref|YP_003064685.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Liberibacter asiaticus str. psy62] gi|254039949|gb|ACT56745.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 216 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + GQIED + + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP-- 101 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ T AAS G L+ A G+ F P + L + S Sbjct: 102 PISTFCMGQAASMGSLLLSAGEK------------GMRFALPNARILLHQP--------S 141 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGA 216 + S E + + + ++ ++ Y ++ Y++ D I + + Sbjct: 142 GGFSGQASDI-ERHAQDIVKIKRRLNEIY-------VKNCGKTYEEVEKTLDRDHIMSAS 193 Query: 217 EAKKVGLIDVV 227 EA G++D V Sbjct: 194 EACDWGVVDKV 204 >gi|157828616|ref|YP_001494858.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia rickettsii str. 'Sheila Smith'] gi|166214706|sp|A8GSH5|CLPP_RICRS RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|157801097|gb|ABV76350.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia rickettsii str. 'Sheila Smith'] Length = 201 Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 44 IVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 101 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 102 LLLCGGEK------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 140 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 141 QETLKIKRLLNELYSKHTEQELQHIEKSMERDN------FMSPEEAKKFGLVDNIISSRD 194 Query: 233 VWQSLYA 239 V L Sbjct: 195 VMALLAK 201 >gi|329942546|ref|ZP_08291356.1| clp protease family protein [Chlamydophila psittaci Cal10] gi|332287177|ref|YP_004422078.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila psittaci 6BC] gi|313847774|emb|CBY16764.1| putative protease proteolytic subunit [Chlamydophila psittaci RD1] gi|325507036|gb|ADZ18674.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila psittaci 6BC] gi|328815456|gb|EGF85444.1| clp protease family protein [Chlamydophila psittaci Cal10] gi|328914424|gb|AEB55257.1| Clp protease [Chlamydophila psittaci 6BC] Length = 192 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 39/185 (21%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + E I+++ + + ++ ++SPGGS AG A++ I+ + + PV T V +AA Sbjct: 34 SAAEAIKKLWYLELTNPGQPIVFVINSPGGSVDAGFAVWDQIKMMTS--PVTTVVTGLAA 91 Query: 109 SAGYLISCAS--NIIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 S G ++S + A S + SIG P + L + + + + K Sbjct: 92 SMGSVLSLCAAPGRRFATPHSRIMIHQPSIG----GP-ITGQATDLDIHAREILKTK-KR 145 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 + E ++ ++++ +D T EAK G Sbjct: 146 IVDVYLEATGQSREVIEKAIDRDTWM-------------------------TADEAKDFG 180 Query: 223 LIDVV 227 L+D + Sbjct: 181 LLDGI 185 >gi|315221928|ref|ZP_07863839.1| Clp protease [Streptococcus anginosus F0211] gi|319939597|ref|ZP_08013956.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus anginosus 1_2_62CV] gi|315188894|gb|EFU22598.1| Clp protease [Streptococcus anginosus F0211] gi|319811186|gb|EFW07492.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus anginosus 1_2_62CV] Length = 196 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 75/191 (39%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYINTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V MAAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGMAASMGTIIASSGAK------------GKRFMLPNAEYLIHQ---------- 122 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM S + + + + + + + ++++++ + ++ W + Sbjct: 123 -PMGGTGSGTQQT---DMAIAAEHLLKTRNNLEKILADNSGKTIKQVHKDAERDYWMSAQ 178 Query: 217 EAKKVGLIDVV 227 E G ID + Sbjct: 179 ETLDYGFIDEI 189 >gi|295428018|ref|ZP_06820650.1| phage protease [Staphylococcus aureus subsp. aureus EMRSA16] gi|295128376|gb|EFG58010.1| phage protease [Staphylococcus aureus subsp. aureus EMRSA16] Length = 261 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 54/214 (25%) Query: 41 IAIRGQIED---------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQ 91 I I G I + + +++ + + + V ++S GGS + G AI+ ++ Sbjct: 24 IFIYGDIVSDKWFESDVTATDFKNKLDELGD---ISEIDVHINSSGGSVFEGHAIYNMLK 80 Query: 92 KVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS---LVGSIGVLFQYPYVKPFLDKL 148 + + V +AAS +I+ + + I + S + S + + Sbjct: 81 MHPAK--INIYVDALAASIASVIAMSGDTIFMHKNSFLMIHNSW--VMTVGNAEELRKTA 136 Query: 149 GV--SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 + +V +S + + ++ ++D+ Sbjct: 137 DLLEKTDAVSNSAYLD------KAKDLDQEHLKQMLDT---------------------- 168 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYA 239 W T EA GLID + G E+ S+ Sbjct: 169 ----ETWLTAEEALSFGLIDEILGANEIAASISK 198 >gi|254572225|ref|XP_002493222.1| hypothetical protein [Pichia pastoris GS115] gi|238033020|emb|CAY71043.1| Hypothetical protein PAS_chr3_0979 [Pichia pastoris GS115] gi|328352764|emb|CCA39162.1| ATP-dependent Clp protease, protease subunit [Pichia pastoris CBS 7435] Length = 226 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 74/193 (38%), Gaps = 33/193 (17%) Query: 40 RIAIRGQIEDSQ--ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D+Q + ++ + ++ + + ++SPGGS AG AI+ IQ ++ Sbjct: 52 IIYLAGGIDDAQATSITAQLLYLESQSTSKQINIYINSPGGSVTAGLAIYDTIQYIRA-- 109 Query: 98 PVITEVHEMAAS-AGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 PV T A S A L++ ++ +++ + +K + + + Sbjct: 110 PVSTVCLGQACSMASLLLASGTHGKRLILPNATIM--VHQPSSANGIKGQATDIEIYARH 167 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + ++ K + ++P VD L+ R + ++ Sbjct: 168 IINTKQKLQTLYLKHMSPTMT------VDEI----TALLERDRFMEPEE----------- 206 Query: 215 GAEAKKVGLIDVV 227 A +GL D V Sbjct: 207 ---AVSLGLADRV 216 >gi|327541856|gb|EGF28368.1| Nodulation efficiency, NfeD [Rhodopirellula baltica WH47] Length = 513 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 17/225 (7%) Query: 29 SHVEDNSPHVARIAIRGQIED-SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIF 87 S V I + I S L++R + + A +I+ + SPGGS + Sbjct: 44 SDVGSGKRRGVLIEFKEDINPLSGALLKRKFEAAVESDADVIILDIQSPGGSTSVTLELM 103 Query: 88 RAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-----FQYPYVK 142 + + K+ + V + + A S +++ +++ I+ + +G G + Y Y Sbjct: 104 DMVLEAKDVETV-AYIEKDAYSGAAMLAISTDTILMRPDARMGDAGEIVEGADGAYRYTS 162 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ----DVVDSSYHWFVRLVSESRN 198 + + ++ K + + Q + + Y L S Sbjct: 163 AKRRSALAQKVRDTAEATGRPLALAEKMTDKDMVVYQATNKESGEKRYLSDKDLASREDA 222 Query: 199 IPYDKTLVLSDG---RIWT--GAEAKKVGLIDV-VGGQEEVWQSL 237 ++ + + + +T G ++G++D + ++++ + L Sbjct: 223 DQWELSPPIREAGKEMFFTVNGRRGVELGMVDQTIESRDDLAKVL 267 >gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9] Length = 236 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 81/194 (41%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ + +D + + ++SPGGS YAG AI+ IQ+++ Sbjct: 58 RIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGSVYAGMAIYDTIQQIRPD 117 Query: 97 KPVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L++ + ++ S + + + + + I+ Sbjct: 118 --VVTICFGLAASMGAFLLTAGTAGKRMSLPDSR------IMIHQPLGGAQGQA-IDIEI 168 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + + ++ ++ L+S+ P ++ ++ + Sbjct: 169 ----------------QAREILYIKANLNQ-------LMSKHTGQPLERIEADTERDFFM 205 Query: 214 TGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 206 SPQEAKDYGLIDQV 219 >gi|15864561|emb|CAC80640.1| ClpP putative protein [Brassica napus] Length = 313 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 89/241 (36%), Gaps = 43/241 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 109 MTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGLA 166 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ + Sbjct: 167 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGSAGGK 202 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GL+D Sbjct: 203 ATEMSIRVREMMYHKI-KLNKIFSRI----TGKPESEIEGDTDRDYFLNPWEAKEYGLVD 257 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G + I D PP N D + + +P + Sbjct: 258 AV--IDD--------GKPGLVAPIGDGTPPPNTKVWDFWKVEGTKNDNKDLPTEQSRVQN 307 Query: 286 G 286 G Sbjct: 308 G 308 >gi|6069464|dbj|BAA85451.1| S-locus protein 2 [Brassica rapa] Length = 311 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 89/241 (36%), Gaps = 43/241 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 107 MTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGLA 164 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ + Sbjct: 165 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGSAGGK 200 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GL+D Sbjct: 201 ATEMSIRVREMMYHKI-KLNKIFSRI----TGKPESEIEGDTDRDYFLNPWEAKEYGLVD 255 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G + I D PP N D + + +P + Sbjct: 256 AV--IDD--------GKPGLVAPIGDGTPPPNTKVWDFWKVEGTKNDNKDLPTEQSRVQN 305 Query: 286 G 286 G Sbjct: 306 G 306 >gi|67921362|ref|ZP_00514880.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501] gi|67856474|gb|EAM51715.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501] Length = 200 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 69/181 (38%), Gaps = 33/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + + DD + + ++SPGGS AG AI+ +Q +K+ VIT +AAS Sbjct: 44 ANRIVALLLYLDSDDPNKPIYLYINSPGGSVTAGMAIYDTMQYIKSE--VITICVGLAAS 101 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A + + + + + + ++++ + Sbjct: 102 MGSFLLAAGTPGKRLALPHAR------IMIHQPLGGTGGRRQATDIEIEANEILRI---- 151 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 + ++ +K +D + + EAK+ GLID Sbjct: 152 -------RAQLNQLLADQCGQ-----------SLEKIEKDTDRDYFMSAEEAKEYGLIDK 193 Query: 227 V 227 V Sbjct: 194 V 194 >gi|326391311|ref|ZP_08212851.1| protein of unknown function DUF107 [Thermoanaerobacter ethanolicus JW 200] gi|325992640|gb|EGD51092.1| protein of unknown function DUF107 [Thermoanaerobacter ethanolicus JW 200] Length = 442 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 96/267 (35%), Gaps = 45/267 (16%) Query: 38 VARIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 V ++I G I + + ++ ++ A+ +++ LS+PGG + I I + + Sbjct: 33 VYVLSIDGPIVPVVADYIESGLQEAEKN-GASCIVIELSTPGGLYSTTQKIVTKI--LNS 89 Query: 96 RKPVITEVHEMAA---SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSI 152 PV+ V A SAG I+ ++N+ A S +G Sbjct: 90 HIPVVVYVSPAGAWAGSAGTFITLSANVAAMAPGSRIG---------------------- 127 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGR 211 + S ++ Q + ++R ++E+R + + + Sbjct: 128 -----AAHPVSMEDDSALSDVQRQKLT----HDAAAWIRSIAENRGRDPKNAEMAVIESK 178 Query: 212 IWTGAEAKKVGLID-VVGGQEEVWQSLYALGV---DQSIRKIKDWNPPKNYWFCDLKNLS 267 +T EA L+D ++ + + L V D +I ++ P K + + Sbjct: 179 SFTDTEALNAHLVDFKATNLNDLLKKINGLTVKNFDGTITTLQTDGPIKYFPMSSAQKFL 238 Query: 268 ISSLLEDTIPLMKQTKVQGL-WAVWNP 293 + + L+ + G+ +++P Sbjct: 239 FAISDPNIAYLLMSAGILGIVLELYHP 265 >gi|330921326|ref|XP_003299376.1| hypothetical protein PTT_10352 [Pyrenophora teres f. teres 0-1] gi|311326959|gb|EFQ92512.1| hypothetical protein PTT_10352 [Pyrenophora teres f. teres 0-1] Length = 248 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 77/192 (40%), Gaps = 33/192 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+++D S + ++ + D+ + + ++SPGGS AG AI+ + +K+ Sbjct: 72 IICLNGEVDDFMSANAVAQLLFLEADNPEKPISMYINSPGGSVSAGLAIYDTMNYIKS-- 129 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T +AAS L++ + G + P+ + + + Sbjct: 130 PVSTICMGIAASMGSLLLAGGAE-------------GQRYILPHARVMIHQP-------- 168 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + S ++ + K + ++D ++ Y + ++ + + Sbjct: 169 SGGYSGKASDIAD-HAKEILRIRDKLNRIYQSHLTT-----KRTLEEIEKYMERDYYMDA 222 Query: 216 AEAKKVGLIDVV 227 EA + G++D + Sbjct: 223 QEAVEFGIVDKI 234 >gi|156084894|ref|XP_001609930.1| ATP-dependent Clp protease proteolytic subunit 1 [Babesia bovis T2Bo] gi|154797182|gb|EDO06362.1| ATP-dependent Clp protease proteolytic subunit 1, putative [Babesia bovis] Length = 225 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 47/216 (21%) Query: 32 EDNSPHVARIA----------IRGQIED--SQELIERIERISRDDSATALIVSLSSPGGS 79 + NS ++A++ + G++ D S LI +I R++ ++ + ++SPGGS Sbjct: 30 KSNSDYLAKVDEFHIRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGS 89 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AGYLISCASNII-VAAETSLVGSIGVLFQ 137 AG AI+ +Q +K R V T AAS +L++ + + A S + Sbjct: 90 VSAGLAIYDILQSLKMR--VETICIGQAASMGAFLLAAGAKGLRSAMPNSR------IMI 141 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + + + +K + + ++ ++++ + F Sbjct: 142 HQPLGGAHG----EVTDIK-------------IQANEILHIRQILNAHFSHFT------- 177 Query: 198 NIPYDKTLVLSDGRIWT-GAEAKKVGLIDVVGGQEE 232 ++ + + +EA + GLID + Sbjct: 178 GKSIEQVEQDCERDYYMRPSEAMEYGLIDRICTTRT 213 >gi|218235172|ref|YP_002367332.1| Clp protease [Bacillus cereus B4264] gi|218163129|gb|ACK63121.1| Clp protease [Bacillus cereus B4264] Length = 197 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 31/149 (20%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++S GGS +AG AI+ +++ K +K V +AAS +I+ A + +V + Sbjct: 20 IYVNSGGGSVFAGLAIYNMLKRNKAQK--TVYVDGVAASIASVIALAGDRVVVPSNAF-- 75 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 L + + + F + + + ++ + + Y + Sbjct: 76 ----LMIH------------KPWTYAAGNAID----FRKA-AEDLDNIESGIMNVYKENL 114 Query: 191 RLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 + I ++ L D W +G EA Sbjct: 115 KE-----GIEIEEIQQLVDAETWLSGEEA 138 >gi|17028170|gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea] Length = 279 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 89/241 (36%), Gaps = 43/241 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 75 MTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGIA 132 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ + Sbjct: 133 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGSAGGK 168 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GL+D Sbjct: 169 ATEMSIRVREMMYHKI-KLNKIFSRI----TGKPESEIEGDTDRDYFLNPWEAKEYGLVD 223 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G + I D PP N D + + +P + Sbjct: 224 AV--IDD--------GKPGLVAPIGDGTPPPNTKVWDFWKVEGTKNDNKDLPTEQSRVQN 273 Query: 286 G 286 G Sbjct: 274 G 274 >gi|189501545|ref|YP_001957262.1| peptidase S14 ClpP [Candidatus Amoebophilus asiaticus 5a2] gi|189496986|gb|ACE05533.1| peptidase S14 ClpP [Candidatus Amoebophilus asiaticus 5a2] Length = 455 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 56/265 (21%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSL-SSPGGSAYAGEAIFRAIQKVKNRK 97 +++ G + + + +RI+ + D + + + +SPGGSA AG I +A+Q + Sbjct: 225 VSLDGVVTSWKANYITDRIKYFNNKDKTKPIFIVIENSPGGSALAGLHIVQAMQNSQA-- 282 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV + AAS LI+ + A ++ + Sbjct: 283 PVYVVLKTFAASMAALITTLAKKSYAYPNAI-------------------------LLHH 317 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-----VLSDGRI 212 P E+ + ++ M+ + V++ I DK S G Sbjct: 318 QPWSFTGGNLREL-KEEIEFMK----ELWKRLGGQVAKKMGISLDKLDKQLYEKASRGD- 371 Query: 213 WT--GAEAKKVGLIDVVGG--QEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSI 268 WT AKK+ +D V + Q + + +KD+ D+ S+ Sbjct: 372 WTEFADNAKKIKWVDHVITNINDTAIQEMPNSTNYTWHKYMKDY--------FDMAETSV 423 Query: 269 SSLLEDTIPLMKQTKVQGLWAVWNP 293 + +P++ + ++NP Sbjct: 424 DNSNNIYLPVLGPKD---FYYLYNP 445 >gi|229146367|ref|ZP_04274738.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST24] gi|296504293|ref|YP_003665993.1| translocation-enhancing protein TepA [Bacillus thuringiensis BMB171] gi|228637000|gb|EEK93459.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST24] gi|296325345|gb|ADH08273.1| translocation-enhancing protein tepA [Bacillus thuringiensis BMB171] Length = 249 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|149181848|ref|ZP_01860338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. SG-1] gi|148850487|gb|EDL64647.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. SG-1] Length = 206 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 47/203 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + ++ + + ++SPGGS AG AI+ IQ +K Sbjct: 36 VIMLGSGIDDNVANSIVAQLLFLESENPEKDISIYINSPGGSITAGMAIYDTIQYIKPD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T MAAS +L++ + G P + + Sbjct: 95 -VQTICIGMAASMGAFLLAAGAK-------------GKRLALPNAEVMI----------- 129 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSDGR 211 + Q + + + F+R ++S+ P + +D R Sbjct: 130 ----------HQPLGGAQGQATEIEIAAKRILFLREKLNQILSDRTGQPLEVISKDTD-R 178 Query: 212 --IWTGAEAKKVGLIDVVGGQEE 232 T A + GLID + E Sbjct: 179 DNFMTAERALEYGLIDRIITSNE 201 >gi|70699878|gb|AAZ06847.1| ClpP1 [Microbacterium arborescens] Length = 194 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ E+ +I ++ +DS + + ++SPGGS AG AI+ +Q V N ++T MA Sbjct: 29 ENANEICAKILLLAAEDSEKDIYLYINSPGGSITAGMAIYDTMQFVPND--IVTVGIGMA 86 Query: 108 ASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 AS G L+ A G + P + L + P Sbjct: 87 ASMGQLLLTAGTK------------GKRYITPNARVLLHQ-----------PHGGFGG-- 121 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTGAEAKKVGLI 224 +Q ++ + + ++ +DG R +T EA + G + Sbjct: 122 ---TASDIQTQAQLILDMKRRLAEITAAQTGKSVEQIN--ADGDRDRWFTAQEALEYGFV 176 Query: 225 DVV 227 D + Sbjct: 177 DHI 179 >gi|229098266|ref|ZP_04229213.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-29] gi|228685164|gb|EEL39095.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-29] Length = 249 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG Q L L Sbjct: 216 GLIDDVGGIGSALQKLNEL 234 >gi|77020875|gb|ABA60429.1| capsid protein [Wolbachia phage WO] Length = 115 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 ++++ +Q VD Y FV+L++ +R + +K ++ ++ G A +GL D Sbjct: 1 ESLESLQKEVDRLYEMFVQLIARNRGLSIEKIKS-TEAGLYFGKNAVDIGLADG 53 >gi|149926126|ref|ZP_01914388.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp. MED105] gi|149824944|gb|EDM84156.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp. MED105] Length = 215 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I D + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 44 VIFLVGPINDQMANVIVAQMLFLESENPDKDIALYINSPGGSVSAGMAIYDTMQFIKPD- 102 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L+S + + S + + + Sbjct: 103 -VSTLCTGLAASMGAFLLSSGTKGKRFSLPNSR------IMIHQPLGGVQ---------- 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 E++ K + +++ ++ +++++ ++ +D + G Sbjct: 146 --GQASDI-----EIHAKEILYLREKLN-------GILADNTGKTIEEIARDTDRDNFMG 191 Query: 216 AE-AKKVGLIDVV 227 A+ AK+ GLID V Sbjct: 192 ADSAKEYGLIDDV 204 >gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae Eb661] gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae Eb661] Length = 215 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ ++ +K Sbjct: 50 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMKFIKPD- 108 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + A S V + + + + Sbjct: 109 -VSTICMGQACSMGAFLLTAGTKGKRYALPNSRV------MIHQPLGGYQGQATDIEIHA 161 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ +E ++ ++ R Sbjct: 162 REIL----------------KVKARMNELM-----------AEHTGKTLEEIERDTERDR 194 Query: 212 IWTGAEAKKVGLIDVV 227 + +EA + GL+D V Sbjct: 195 FLSASEAVEYGLVDSV 210 >gi|260773194|ref|ZP_05882110.1| ATP-dependent Clp protease proteolytic subunit [Vibrio metschnikovii CIP 69.14] gi|260612333|gb|EEX37536.1| ATP-dependent Clp protease proteolytic subunit [Vibrio metschnikovii CIP 69.14] Length = 208 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q + K Sbjct: 42 VIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFI---K 98 Query: 98 P-VITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P V T A S +L++ + S V + + + + Sbjct: 99 PNVSTLCVGQACSMGAFLLAGGAPGKRYVLPNSRV------MIHQPLGGFQGQASDIQIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + S K L++E P D +D R Sbjct: 153 AQEILSIKNKLN---------------------------TLLAEHTGQPLDVIERDTD-R 184 Query: 212 --IWTGAEAKKVGLIDVV 227 + +A G++D + Sbjct: 185 DNFMSAQQAVDYGIVDAI 202 >gi|237747841|ref|ZP_04578321.1| ClpP protease [Oxalobacter formigenes OXCC13] gi|229379203|gb|EEO29294.1| ClpP protease [Oxalobacter formigenes OXCC13] Length = 277 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 6/105 (5%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDSQE----LIERIERISRDDSATALIVSLSSPGGSAYA 82 W V+ + A I+I I ++ E +RI + R+ + ++V ++SPGG+ + Sbjct: 30 WLPDVKSATESAATISILDTIGENMEGGGITAKRIAAVLRNAEGSDIVVDINSPGGNFFE 89 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS 127 G AI+ +++ K + V V +AASA +I+ A + I+ E + Sbjct: 90 GVAIYNQLREHKGK--VTCRVLSLAASAASVIAMAGDEILMGEGA 132 >gi|254423169|ref|ZP_05036887.1| Clp protease [Synechococcus sp. PCC 7335] gi|196190658|gb|EDX85622.1| Clp protease [Synechococcus sp. PCC 7335] Length = 200 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 34/192 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++ + + +DS + + ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLTEEVDDGIANAIVAYMLYLDSEDSTKPIYLYINSPGGSVTAGMAIYDTMQYIKSE- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ + +A S + ++ Q + I++V Sbjct: 91 -VVTICMGLAASMGAFLLNAGTKGKRLALPHSRI----MIHQPSGGVGRRQATDIEIEAV 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + E+N V+ R+ D + Sbjct: 146 R------IVQVRRELNELMAAHSGRTVEEI----------ERDSDRDN--------FMSA 181 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 182 EEAKEYGLIDRV 193 >gi|163731525|ref|ZP_02138972.1| Clp protease, putative [Roseobacter litoralis Och 149] gi|161394979|gb|EDQ19301.1| Clp protease, putative [Roseobacter litoralis Och 149] Length = 208 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + D+ A + + ++SPGG +G +I+ +Q +K + Sbjct: 37 IIFLNGPVHDGMSSLIVAQLLHLEADNPAKEISMYINSPGGVVTSGLSIYDTMQYIKPK- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A G+ F P + + + S Sbjct: 96 -VSTLVIGQAASMGSLLLTAGEA------------GMRFSLPNSRIMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGA 216 + + + ++ Q ++D ++ Y + K L + Sbjct: 135 GGYQGQATDI-MIHAAETQKLKDRLNEIY-------VKHTGQTLKKVENALERDNFMSPE 186 Query: 217 EAKKVGLIDVV 227 EAK GLID + Sbjct: 187 EAKDFGLIDEI 197 >gi|47569067|ref|ZP_00239756.1| translocation-enhancing protein tepA [Bacillus cereus G9241] gi|228986940|ref|ZP_04147066.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157374|ref|ZP_04285452.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 4342] gi|47554229|gb|EAL12591.1| translocation-enhancing protein tepA [Bacillus cereus G9241] gi|228626101|gb|EEK82850.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 4342] gi|228772718|gb|EEM21158.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 249 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|242381153|emb|CAS03780.1| capside protein [Wolbachia phage WO] Length = 124 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D V Sbjct: 1 LQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGV 49 >gi|205373589|ref|ZP_03226392.1| TepA [Bacillus coahuilensis m4-4] Length = 250 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 85/230 (36%), Gaps = 57/230 (24%) Query: 33 DNSPHVARIAIRGQIEDSQEL------------IERIERISRDDSATALIVSLSSPGGSA 80 N ++ + I GQIE +L I ++ I ++ L+V L++ GG Sbjct: 43 SNDSNIHCLTIVGQIEGHMQLPPQNKTTKYEHMIPQLVAIEQNPKIEGLLVILNTVGGDV 102 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 AG AI + + KP ++ V S G I+ A + AET+ + +P Sbjct: 103 EAGLAIAEMLASLS--KPTVSIVLGGGHSIGVPIATACDYSFIAETA------TMTIHPV 154 Query: 141 -VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNI 199 + + +GV P+ + M + D V+ V+ NI Sbjct: 155 RLTGLV--IGV---------------------PQTFEYMDKMQDRV----VKFVTGHSNI 187 Query: 200 PYDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + L + G + G +A K GL++ VGG + L L Sbjct: 188 SEEDFKDLMFAKGNLTRDIGTNVVGDDAVKYGLMNEVGGLGAAMKKLNEL 237 >gi|154482729|ref|ZP_02025177.1| hypothetical protein EUBVEN_00406 [Eubacterium ventriosum ATCC 27560] gi|149736324|gb|EDM52210.1| hypothetical protein EUBVEN_00406 [Eubacterium ventriosum ATCC 27560] Length = 193 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +I D+ ++ ++ + +D + + ++SPGGS AG AI+ + VK Sbjct: 29 IIFLGEEINDAVASTVVAQLLFLESEDPGKDIHMYINSPGGSVTAGMAIYDTMNYVKCD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L+S + A + V + + + Sbjct: 88 -VSTTCIGMAASMGAFLLSSGAKGKRYALPNAEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +Q+ + + + ++++++ P ++ +D W + Sbjct: 134 -----------------TEIQIAAEHILKTKKKLNQILADNAGKPVEEVEKDTDRDNWLS 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 ADEAKEYGLIDEV 189 >gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidaminococcus fermentans DSM 20731] gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidaminococcus fermentans DSM 20731] Length = 197 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+IED + +I ++ + +D + + ++SPGGS AG AI+ +Q ++ Sbjct: 29 IIFVTGEIEDHMANLIIAQLLFLESEDPDKDVHLYINSPGGSVSAGLAIYDTMQYIRPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS A L++ + A S V + + + Sbjct: 88 -VSTICVGMAASMASVLLAAGTKGKRYALPHSRV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + ++++ ++ + ++ + T Sbjct: 134 -----------------TDIEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMT 176 Query: 215 GAEAKKVGLIDVV 227 EA GLID V Sbjct: 177 AEEAANYGLIDQV 189 >gi|71083579|ref|YP_266298.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91762000|ref|ZP_01263965.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Pelagibacter ubique HTCC1002] gi|115311789|sp|Q4FM94|CLPP_PELUB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|71062692|gb|AAZ21695.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91717802|gb|EAS84452.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 203 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I D + + ++ + +D + + ++SPGG AG I+ +Q +K Sbjct: 38 IIFLVGPINDNVASLVTAQLLFLESEDPKKEINLYINSPGGLVTAGLGIYDTMQYIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L++ + S I V + + + V Sbjct: 97 -VSTLCIGQAASMGSFLLAAGKKGKRFSLPNSR---IMVHQPSAGFQGQATDIEIHANEV 152 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV-LSDGRIWT 214 + ++ ++ Y S+ D L T Sbjct: 153 LA--------------------LKKRLNEIY-------SKHTGKSVDDVKKALERDNFMT 185 Query: 215 GAEAKKVGLIDVV 227 AK+ GLID V Sbjct: 186 PDTAKEFGLIDEV 198 >gi|291548434|emb|CBL21542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus sp. SR1/5] Length = 193 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 39/180 (21%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 IVAQLLFLEAEDPSKDIQLYINSPGGSVTAGMAIYDTMQYIKCD--VSTICLGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L+S + A S + + + ++ + + + K Sbjct: 102 FLLSSGAKGKRYALPNS------TIMIHQPSGGAQGQATEIQIVADQIAKTK-KKLNEIL 154 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 S + +++++ D + T EAK GLID V Sbjct: 155 SANTGQPLEIVEKDTDRDNYM-------------------------TAEEAKAYGLIDGV 189 >gi|323935653|gb|EGB31970.1| Clp protease [Escherichia coli E1520] Length = 637 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 36/187 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +++ E ++ + + + + + SPGG + G AI+ ++ + Sbjct: 23 EIGGFGVTAKQFAEDLKALGD---VSHINLRIHSPGGDVFEGIAIYNLLRNHPAD--ITV 77 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +++ A + +V E ++ + + G+ S Sbjct: 78 YIDGVAASMASVVAMAGDRVVMPENAM------MMIH-------KPWGI------SGGNA 118 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + ++++ K ++ V + + + + W G E K Sbjct: 119 GDMRDYADLLDKVETVL-----------VPAYARKTGKSAQEITAMLEDETWMDGKECLK 167 Query: 221 VGLIDVV 227 G D + Sbjct: 168 HGFADEL 174 >gi|320540337|ref|ZP_08039989.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases [Serratia symbiotica str. Tucson] gi|320029657|gb|EFW11684.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases [Serratia symbiotica str. Tucson] Length = 207 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + + + + ++SPGG AG +I+ ++ +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGMSIYDTMKFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + + S V + + + + Sbjct: 101 -VSTICMGQACSMGSFLLTAGAKSKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGR 211 + + K M +++ +E + R Sbjct: 154 REIL----------------KVKARMNELM-----------AEHTGQSLAQIECDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 T EA + GL+D + Sbjct: 187 FMTADEAVEYGLVDGI 202 >gi|121605153|ref|YP_982482.1| peptidase S14, ClpP [Polaromonas naphthalenivorans CJ2] gi|120594122|gb|ABM37561.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas naphthalenivorans CJ2] Length = 674 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 71/193 (36%), Gaps = 38/193 (19%) Query: 41 IAIRGQIEDS--QELIERIE--RISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 I I G I +S +E + + D ATA+ V ++S GGS G AI+ A+++ K Sbjct: 30 IYIYGDIGESWYEETVSAATFVKELNDIDATAITVRINSIGGSVPDGLAIYNALRRHKAE 89 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V E+ MA S LI+ A + + A ++ L + Sbjct: 90 --VTIEIDGMALSVASLIAMAGDKVNMANNAM------LMIH------------------ 123 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWT 214 S S + + M D +D+ + +L+DG+ +T Sbjct: 124 -----GPWSYVSGNSVELRD-MADQLDTWAAAMSNSYAARTGDQPAMLALLTDGKDHFYT 177 Query: 215 GAEAKKVGLIDVV 227 +A +D + Sbjct: 178 AEQALAEKFVDAI 190 >gi|295100804|emb|CBK98349.1| ATP-dependent Clp protease proteolytic subunit ClpP [Faecalibacterium prausnitzii L2-6] Length = 199 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 31/179 (17%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + D + + ++SPGGS AG AI IQ +K V T MAAS Sbjct: 44 VVAQLLYLEGQDPDKDISLYINSPGGSISAGMAIHDTIQYIKCD--VSTICMGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L++ + A + + + +P + S +++ +K Sbjct: 102 FLLASGTKGKRFALPNAE------IMIH---QPLIAGGQGGGLSGQATDIK--------- 143 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLIDVV 227 + D + + RL+SE P +K ++ R + EAK+ GLID V Sbjct: 144 ------IHADHIIRTRAKMNRLLSEYTGQPLEKVEQDTE-RDNFLSAQEAKEYGLIDEV 195 >gi|170706783|ref|ZP_02897241.1| clp protease [Bacillus anthracis str. A0389] gi|170128201|gb|EDS97070.1| clp protease [Bacillus anthracis str. A0389] Length = 249 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLIVLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|332981522|ref|YP_004462963.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella australiensis 50-1 BON] gi|332699200|gb|AEE96141.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella australiensis 50-1 BON] Length = 235 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 73/190 (38%), Gaps = 25/190 (13%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + L+V L++ GG AG A+ I + KP ++ V S Sbjct: 64 EHVIPQLVAVEESREVEGLLVVLNTVGGDVEAGLALAEMIATLS--KPTVSLVLGGGHSI 121 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ +++ ++ + +P + + S + P + Sbjct: 122 GVPLAVSTDYSFIVPSA------TMTIHP----------IRM----SGMIIGVPQTYEYF 161 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQ 230 N +++Q + D S+ + + E + + G + G EA + GLID +GG Sbjct: 162 NKMQDRILQFICDHSHIT-IDKLKEYMLKTGELANDI--GTVLIGEEATRCGLIDEIGGV 218 Query: 231 EEVWQSLYAL 240 + L L Sbjct: 219 SKAIIKLKQL 228 >gi|330884894|gb|EGH19043.1| putative inner membrane peptidase [Pseudomonas syringae pv. glycinea str. race 4] Length = 42 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 28/39 (71%) Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLF 136 P+ + ++AAS GY+++C N I++A +++GSIGV+ Sbjct: 4 PLTVCIDKVAASGGYMMACIGNKIISAPFAILGSIGVVA 42 >gi|264677387|ref|YP_003277293.1| ATP-dependent Clp protease proteolytic subunit [Comamonas testosteroni CNB-2] gi|299533085|ref|ZP_07046471.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas testosteroni S44] gi|262207899|gb|ACY31997.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas testosteroni CNB-2] gi|298718970|gb|EFI59941.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas testosteroni S44] Length = 202 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + ++ + ++SPGGS AG AIF + +K Sbjct: 37 VIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIFDTMNFIKPD- 95 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS- 151 V T MAAS +L+S + A + V + + ++ + Sbjct: 96 -VSTLCTGMAASMGAFLLSAGAKGKRYALPNAQV------MIHQPLGGARGQATEIEIHA 148 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K+ + + ++ +E P +K ++ Sbjct: 149 REIIKT-----------------RERLNKIL-----------AERTGQPLEKIQNDTERD 180 Query: 212 IW-TGAEAKKVGLIDVV 227 + + EAK+ GL+D V Sbjct: 181 YFLSADEAKEYGLVDQV 197 >gi|293369840|ref|ZP_06616413.1| Clp protease [Bacteroides ovatus SD CMC 3f] gi|292635017|gb|EFF53536.1| Clp protease [Bacteroides ovatus SD CMC 3f] Length = 353 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 83/244 (34%), Gaps = 42/244 (17%) Query: 39 ARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ARI ++G I E E ++E + + + + ++SPGG + I I++ Sbjct: 12 ARIELKGTISKWRETEAEFTSKVEELIK-SGVKDVHIYINSPGGECFEANEIVNVIKRFP 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + E + ASA I+ G+ + Sbjct: 71 GK--ITGEGGALVASAATYIAINCTSFSMPAN------GLFMIHQVSGGAC--------- 113 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + S ++M+ + + + F+ ++ + I +G W Sbjct: 114 ---GKVADIESTL--------EVMRKLNEHYLNAFLSKCTDKKKIK----DAWDNGDYWM 158 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + EAK+ G + V G+ +V ++ + G I N K+ DL L+ Sbjct: 159 SAQEAKENGFVTEVTGKAKVDKATAQMITNCGYTGEIEITDFINNEKSKNDMDLTMLTTR 218 Query: 270 SLLE 273 ++ Sbjct: 219 FGMD 222 >gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum D str. 1873] gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum BKT015925] gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum D str. 1873] gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium botulinum BKT015925] Length = 195 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 70/185 (37%), Gaps = 41/185 (22%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 VVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIYDTMQYIKPD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEPS-P 166 +L++ + A S + + + +G+ + +K + + Sbjct: 102 FLLTAGAKGKRFALPNSE------IMIHQPLGGFQGQATDIGIHANRIL--KIKDKLNKI 153 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 SE K +++++ V+ F+ EAK+ GLID Sbjct: 154 LSERTGKPLEVIKKDVER--DNFME-----------------------ADEAKEYGLIDD 188 Query: 227 VGGQE 231 V Sbjct: 189 VITSR 193 >gi|197284027|ref|YP_002149899.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis HI4320] gi|226329068|ref|ZP_03804586.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198] gi|227358102|ref|ZP_03842444.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis ATCC 29906] gi|226706465|sp|B4EU53|CLPP_PROMH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|194681514|emb|CAR40393.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis HI4320] gi|225202254|gb|EEG84608.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198] gi|227161837|gb|EEI46869.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis ATCC 29906] Length = 207 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDINLYINSPGGVITAGMSIYDTMQYIKAD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L+S + + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLSAGAKGKRICLPNSRV------MIHQPLGGYQGQATDIQIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ ++ ++ R Sbjct: 154 QEIL----------------KVKSRMNELM-----------AQHTGKSIEEIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + EA + GL+D V Sbjct: 187 FLSANEALEYGLVDKV 202 >gi|191172046|ref|ZP_03033590.1| ATP-dependent protease [Escherichia coli F11] gi|300991767|ref|ZP_07179630.1| Clp protease [Escherichia coli MS 200-1] gi|190907573|gb|EDV67168.1| ATP-dependent protease [Escherichia coli F11] gi|300305521|gb|EFJ60041.1| Clp protease [Escherichia coli MS 200-1] gi|324013002|gb|EGB82221.1| Clp protease [Escherichia coli MS 60-1] Length = 637 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 65/187 (34%), Gaps = 36/187 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +++ E ++ + + + + + SPGG + G AI+ ++ + Sbjct: 23 EIGGFGVTAKQFAEDLKALGD---VSHINLRIHSPGGDVFEGIAIYNLLRNHPAD--ITV 77 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +++ A + +V E ++ + + G+ S Sbjct: 78 YIDGVAASMASVVAMAGDRVVMPENAM------MMIH-------KPWGI------SGGNA 118 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + ++++ K ++ + + + + + W G E K Sbjct: 119 GDMRDYADLLDKVETVL-----------IPAYARKTGKSAQEITAMLEDETWMDGKECLK 167 Query: 221 VGLIDVV 227 G D + Sbjct: 168 HGFADEL 174 >gi|296423577|ref|XP_002841330.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637567|emb|CAZ85521.1| unnamed protein product [Tuber melanosporum] Length = 242 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 35/193 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D S ++ ++ + ++ + + ++SPGGS AG AI+ + ++ Sbjct: 67 IICLNGPVHDGISAVVVAQLLFLEAENPEKQINLYINSPGGSVTAGLAIYDTMNYIQA-- 124 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ C A + S+ V + + + Sbjct: 125 PVSTICIGQAASMGSLLLCGGTKGKRYALPHA---SVMVHQPSILMTKGNSDIAIHA--- 178 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K +N + Q + + + + + ++ G Sbjct: 179 -----KEILRVRERLN----IIYQKHLTKPH-------------TLAQIEKIMERDLFMG 216 Query: 216 -AEAKKVGLIDVV 227 EAK++GL+D + Sbjct: 217 AEEAKEMGLVDEI 229 >gi|229174462|ref|ZP_04301994.1| Translocation-enhancing protein tepA [Bacillus cereus MM3] gi|228609022|gb|EEK66312.1| Translocation-enhancing protein tepA [Bacillus cereus MM3] Length = 249 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|325107894|ref|YP_004268962.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces brasiliensis DSM 5305] gi|324968162|gb|ADY58940.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces brasiliensis DSM 5305] Length = 215 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I D+ ++ ++ + ++ + + ++SPGGS A AI+ +Q + Sbjct: 43 IIFLDGPIHDASANLIVMKLLYLQSENRHQDVHLYINSPGGSVTATLAIYDTMQFLDCD- 101 Query: 98 PVITEVHEMAASAG-YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS G L++ + + S + ++G Sbjct: 102 -VATYCVGLAASGGAVLMAGGAKGKRYSLPHS----------KMMIHQPFGQVG------ 144 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWT 214 +V+ +Q Q++++ + +++++ P ++ ++ R T Sbjct: 145 ------------GQVSDIEIQA-QEIIN-TRETLNQILADHTGQPIERIAKDTERDRYLT 190 Query: 215 GAEAKKVGLIDVV 227 EAK+ GL+D V Sbjct: 191 AKEAKEYGLVDEV 203 >gi|30248062|ref|NP_840132.1| Clp protease [Nitrosomonas europaea ATCC 19718] gi|60389763|sp|Q82Y57|CLPP_NITEU RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|30179947|emb|CAD83942.1| Clp protease [Nitrosomonas europaea ATCC 19718] Length = 214 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 74/202 (36%), Gaps = 37/202 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + ++ +I ++ + ++S + + ++SPGG AG A++ IQ +K Sbjct: 45 IIFLVGPVTETSANLVIAQLLFLESENSEKDIFLYINSPGGLVTAGLAVYDTIQFIKPD- 103 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L++ + S V + + F Sbjct: 104 -VSTLCVGQAASMGAFLLTAGAKGKRYCLPNSRV------MIHQPLGGFQ---------- 146 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 E++ K + ++ ++ +++ +D + G Sbjct: 147 --GQASDI-----EIHAKEILALKSRLNEI-------MAKHTGQTVKAIERDTDRDNFLG 192 Query: 216 AE-AKKVGLIDVVGGQEEVWQS 236 AE A K GL+D V EV Q Sbjct: 193 AEAAVKYGLVDAVLTSREVKQE 214 >gi|109899441|ref|YP_662696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudoalteromonas atlantica T6c] gi|123064308|sp|Q15R46|CLPP_PSEA6 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|109701722|gb|ABG41642.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudoalteromonas atlantica T6c] Length = 212 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ + +K Sbjct: 38 VIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + + V + + F + S + Sbjct: 97 -VSTVCIGQAASMGAFLLSGGAKGKRYCLPNARV------MIHQPLGGFQGQA--SDFEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K S + M ++ + V+ R+ D + Sbjct: 148 HA---KEILSI--------KEKMNRLMAAHTGQDYDKVA--RDTDRDN--------FLSA 186 Query: 216 AEAKKVGLIDVV 227 E+ GL+D V Sbjct: 187 QESVDYGLVDQV 198 >gi|26989764|ref|NP_745189.1| ClpP protease, putative [Pseudomonas putida KT2440] gi|24984659|gb|AAN68653.1|AE016495_5 ClpP protease, putative [Pseudomonas putida KT2440] Length = 387 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 44/215 (20%) Query: 23 VYFSWSSHVEDNSPHVARIAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGG 78 Y ++ D V + + G+I + + I+ ++ I DD + ++V+ ++ GG Sbjct: 24 WYSIAAATEGDADSKVIEVYVYGEIGAWGITANQFIQDLKAI--DDGTSPIVVAFNTNGG 81 Query: 79 SAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138 + G AI A+ ++ R V +AASAG + C ++ +V A ++ L + Sbjct: 82 DLFEGLAIHNALSRLGER--CTGRVDALAASAGSVAVCGAHRVVMASNAM------LMIH 133 Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFS--EVNPKAVQMMQDVVDSSYHWFVRL-VSE 195 +P++ + + ++ + DV+D ++ + ++ Sbjct: 134 --------------------------NPYTWVGGDAEDLRRVADVLDQAFEAMIAAYKAK 167 Query: 196 SRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGG 229 + NI + L + W T +EA +GL D VG Sbjct: 168 APNIDDAELRRLVNAESWLTASEAVALGLADEVGN 202 >gi|317130215|ref|YP_004096497.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus cellulosilyticus DSM 2522] gi|315475163|gb|ADU31766.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus cellulosilyticus DSM 2522] Length = 195 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ ++ DD + + ++SPGGS AG AIF +Q ++ + Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLAADDPEKDISLYINSPGGSITAGMAIFDTMQFIQPK- 87 Query: 98 PVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ A S V + + + + Sbjct: 88 -VQTICIGMAASMGAFLLAAGEPGKRFALPNSEV------MIHQPLGGAQGQAADIEIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + + + + +++ + +++ R+ D Sbjct: 141 KRIV----------------QMREKLNEILAERTGQPIEVIA--RDTDRDN--------F 174 Query: 213 WTGAEAKKVGLIDVV 227 T EAKK GLID V Sbjct: 175 MTSFEAKKYGLIDEV 189 >gi|332529294|ref|ZP_08405256.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hylemonella gracilis ATCC 19624] gi|332041211|gb|EGI77575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hylemonella gracilis ATCC 19624] Length = 194 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + + ++SPGGS AG +IF + +K Sbjct: 29 VIFLVGPVNDQTANLVVAQLLFLESENPDKEISLYINSPGGSVSAGMSIFDTMNFIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ + + S + + + + Sbjct: 88 -VSTLCIGMAASMGAFLLAAGAKGKRFSLPNSK------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + + ++++E P +K ++ + + Sbjct: 134 -----------------TEIEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLS 176 Query: 215 GAEAKKVGLIDVV 227 EAK GL+D V Sbjct: 177 ADEAKDYGLVDQV 189 >gi|307244056|ref|ZP_07526175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptostreptococcus stomatis DSM 17678] gi|306492580|gb|EFM64614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptostreptococcus stomatis DSM 17678] Length = 194 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + ++ D+ ++ ++ + DD + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIFLGDEVNDATASLVVAQLLFLEADDPDKDIHLYINSPGGSVTAGLAIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV 129 V T MAAS +L++ + A S + Sbjct: 88 -VSTICVGMAASMGAFLLAAGAKGKRYALPNSTI 120 >gi|293189652|ref|ZP_06608369.1| Clp protease [Actinomyces odontolyticus F0309] gi|292821390|gb|EFF80332.1| Clp protease [Actinomyces odontolyticus F0309] Length = 216 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + ++ ++ +D + + ++SPGGS AG AI+ +Q + K Sbjct: 43 IIWLGGEVRDDNANVICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAIYDTMQYI---K 99 Query: 98 PVITEVH-EMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P + V MAAS G + + A + V + L G S Sbjct: 100 PDVVTVGMGMAASMGQFLLTAGAPGKRYITPHTRV----------LLHQPLGGAGGSATE 149 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ + D++ + + ++ D W Sbjct: 150 IRINA--------------------DLILGMKKELASITAARTGKTVEQVEADGDRDHWF 189 Query: 214 TGAEAKKVGLIDVV 227 T EA + G +D V Sbjct: 190 TAQEALEYGFVDRV 203 >gi|205375127|ref|ZP_03227918.1| ATP-dependent Clp protease proteolytic subunit [Bacillus coahuilensis m4-4] Length = 198 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 49/205 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K + Sbjct: 29 IIMLGSAIDDNVANSIVAQLLFLETENPEKDISLYINSPGGSITAGMAIYDTMQYIKPK- 87 Query: 98 PVITEVHEMAAS-AGYLISCA-SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + Sbjct: 88 -VQTICIGMAASMGAFLLAAGEPGKRFALPNSEV------MIH----------------- 123 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSDG 210 + Q + + + F+R ++SE P D +D Sbjct: 124 ------------QPLGGAQGQATEIEIAAKRILFLREKLNTILSERTGQPLDVIAQDTD- 170 Query: 211 R--IWTGAEAKKVGLIDVVGGQEEV 233 R T A + GLID + + ++ Sbjct: 171 RDNFMTAERALEYGLIDKIITRHDI 195 >gi|88763690|gb|ABD49514.1| capsid protein [Wolbachia phage WO] Length = 122 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSL 237 +Q VD Y F++L++ +R + +K ++ ++ G +A ++G+ D V E + Sbjct: 2 LQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFINNH 60 Query: 238 YALGVDQSIRKIKD 251 + V + ++ + Sbjct: 61 KSRSVSMTTNELTE 74 >gi|169824905|ref|YP_001692516.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna ATCC 29328] gi|297587291|ref|ZP_06945936.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna ATCC 53516] gi|302379561|ref|ZP_07268046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia magna ACS-171-V-Col3] gi|303234189|ref|ZP_07320835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia magna BVS033A4] gi|167831710|dbj|BAG08626.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna ATCC 29328] gi|297575272|gb|EFH93991.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna ATCC 53516] gi|302312468|gb|EFK94464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia magna ACS-171-V-Col3] gi|302494730|gb|EFL54490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia magna BVS033A4] Length = 195 Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + +I ++ + +D + + ++SPGGS AG AI+ +Q VK Sbjct: 30 IIFVTGEVNDQMADLVIAQLLFLESEDPKKDIQLYINSPGGSVSAGLAIYDTMQYVKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS L++ + A + + + + I+ Sbjct: 89 -VSTICVGMAASMGAILLTSGAKGKRYALPNADT------LIHQPLGGAQGQAS-DIEIH 140 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 + +K +++ ++ SE P +K +D R I Sbjct: 141 AKNILKK------------RELLNKIL-----------SERTGQPLEKIERDTD-RDFIL 176 Query: 214 TGAEAKKVGLIDVV 227 T EAK+ GLID V Sbjct: 177 TAEEAKEYGLIDEV 190 >gi|7657879|emb|CAB89185.1| ClpP [Brassica napus var. napus] Length = 313 Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 89/241 (36%), Gaps = 43/241 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 109 MTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGLA 166 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ + Sbjct: 167 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGSAGGK 202 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GL+D Sbjct: 203 ATEMSIRVREMMYHKI-KLNKIFSRI----TGKPESEIEGDTDRDYFLNPWEAKEYGLVD 257 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G + I D PP N D + + +P + Sbjct: 258 AV--IDD--------GKPGLVAPIGDGTPPPNTKVWDFWKVEGTXNDNKDLPTEQSRVQN 307 Query: 286 G 286 G Sbjct: 308 G 308 >gi|330508860|ref|YP_004385288.1| nodulation protein NfeD [Methanosaeta concilii GP-6] gi|328929668|gb|AEB69470.1| nodulation protein NfeD [Methanosaeta concilii GP-6] Length = 438 Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%) Query: 13 VMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIEDSQE--LIERIERISRDDSATALI 70 VMLS + V+ + + V + ++G I + + ++ +ER +D A AL+ Sbjct: 12 VMLSRILEIVLLLALVLGQAQAAGTVLTVDMKGTITPASDDIVLAALERAEAED-ARALM 70 Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV--HEMAA-SAGYLISCASNIIVAAETS 127 + L +PGG I R I + + PVI V AA SAG +I S+I A + Sbjct: 71 LLLDTPGGGLAETTEILRLIDE--SDIPVIGYVHPEGAAAWSAGTIILIGSDIAAMAPHT 128 Query: 128 LVGS 131 ++GS Sbjct: 129 IIGS 132 >gi|254409743|ref|ZP_05023524.1| Clp protease [Microcoleus chthonoplastes PCC 7420] gi|196183740|gb|EDX78723.1| Clp protease [Microcoleus chthonoplastes PCC 7420] Length = 198 Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 45/197 (22%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + ++I + + +D+ + + ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLGKEVDDEITNQIIAVMLYLDSEDNNKDIYLYINSPGGSVTAGMAIYDTMQHIKSD- 90 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVS 151 V+T +AAS G + A +A S + S GV Q + Sbjct: 91 -VVTICVGLAASMGSFLLTAGKQGKRLALPHSRIMIHQPSGGVRGQATDI---------- 139 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 E+ + + ++ ++ Y ++ +K D Sbjct: 140 -----------------EIEAREILRIRRQLNQIY-------ADKTGQTVEKIEKDIDRD 175 Query: 212 IW-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 176 FFMSAQEAKEYGLIDRV 192 >gi|254444482|ref|ZP_05057958.1| Clp protease [Verrucomicrobiae bacterium DG1235] gi|198258790|gb|EDY83098.1| Clp protease [Verrucomicrobiae bacterium DG1235] Length = 192 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +I + GQ+ D ++++ E++ + D + +++PGGS AG AI+ I+ + + Sbjct: 26 KIFLWGQVSDESAKDVTEKLFYLEADAPGKDITFYINTPGGSVTAGLAIYDTIKLISSE- 84 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 VI V +AAS G ++ A G YP+ K + + + Sbjct: 85 -VIVVVTGLAASMGSILLSAPKK------------GNRLLYPHAKVLIHQPLIG------ 125 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + + ++ + R+++++ P DK +D + + Sbjct: 126 GQFQG--------PAVDIHIFAQDMEKTREELNRILADASGQPLDKIKEDTDRDFYMSAQ 177 Query: 217 EAKKVGLIDVV 227 EA GL D + Sbjct: 178 EAIDYGLADRI 188 >gi|38146269|gb|AAR11497.1| capsid protein [Wolbachia phage WO] gi|38146277|gb|AAR11501.1| capsid protein [Wolbachia phage WO] Length = 119 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +Q VD Y FV+L++ +RN+ +K ++ ++ G A GL D + Sbjct: 3 ESLQKEVDRLYEMFVQLIARNRNLSTEKIKS-TEAGLYFGKNAVDNGLADGI 53 >gi|167856520|ref|ZP_02479231.1| putative Clp-like protease [Haemophilus parasuis 29755] gi|167852352|gb|EDS23655.1| putative Clp-like protease [Haemophilus parasuis 29755] Length = 655 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 64/187 (34%), Gaps = 36/187 (19%) Query: 42 AIRGQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 I G +Q+ + ++ + + + + SPGGS + G AI+ ++ K Sbjct: 21 EIGGWGISAQQFAKDLKNLGD---LKHIDLHIHSPGGSVFDGIAIYNLLKNHPASK--TV 75 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 + +AAS +I+ + ++ + ++ + + ++ Sbjct: 76 YIDGLAASMASVIAMVGDPVIMPKNAM------MMIH------------KPWGIQGGD-- 115 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKK 220 + ++ D++D + + +E ++ + W T E + Sbjct: 116 ----------AEDMRKYADLLDKIENTLIPAYAEKTGKSPEELAEMLKEETWLTAEECVE 165 Query: 221 VGLIDVV 227 G D + Sbjct: 166 QGFADKL 172 >gi|320450014|ref|YP_004202110.1| putative protease/transporter [Thermus scotoductus SA-01] gi|320150183|gb|ADW21561.1| putative protease/transporter [Thermus scotoductus SA-01] Length = 422 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 77/216 (35%), Gaps = 50/216 (23%) Query: 37 HVARIAIRGQIEDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 I I+G+I+ + + +E+ + + A+ +++ + +PGG A I I ++ Sbjct: 20 KTYLIPIQGEIDPALAVFVEQALTRAEREGASGVVLLIDTPGGRVDAAIRISDRI--LQT 77 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 P + V A SAG LI+ + + S +G P V L + Sbjct: 78 PLPTLAVVQN-AFSAGALIALSCRQMAMLPGSEIG-----AALPVVALPLQQ-------- 123 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-------- 207 P+A Q ++ + F R V+E+R P + + Sbjct: 124 ----------------PQAAD--QKIISALKGKF-RAVAEARGRPVELAEAMVDPQVEIP 164 Query: 208 ---SDGR--IWTGAEAKKVGLID-VVGGQEEVWQSL 237 + G + +A ++ + D G E + Sbjct: 165 GLSAKGEPLTLSADKAVELKVADFKAGSLSEALRQA 200 >gi|229191921|ref|ZP_04318891.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 10876] gi|228591472|gb|EEK49321.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 10876] Length = 249 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|261367425|ref|ZP_05980308.1| Clp protease [Subdoligranulum variabile DSM 15176] gi|282570193|gb|EFB75728.1| Clp protease [Subdoligranulum variabile DSM 15176] Length = 239 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 69/198 (34%), Gaps = 43/198 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I D L+V L++ GG AG A+ I V KP T V S Sbjct: 70 EHVIPQLVDIEEDPEIEGLLVILNTVGGDVEAGLALAELIAGVS--KPSATLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ ++ T+ + +P + LGV Sbjct: 128 GIPLAVSARRSFIVPTA------TMTVHPVRHSGMV-LGV-------------------- 160 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD---------GRIWTGAEAKKV 221 P+ ++ + + + V V+ I + L G + G +A + Sbjct: 161 -PQTLRYFEQMQERI----VGFVAGHSGITARRFTTLMHNTGELVMDMGTVLDGRQAVEE 215 Query: 222 GLIDVVGGQEEVWQSLYA 239 GLID +GG + LY Sbjct: 216 GLIDELGGLSDALGYLYR 233 >gi|90962143|ref|YP_536059.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus salivarius UCC118] gi|227891166|ref|ZP_04008971.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus salivarius ATCC 11741] gi|301301246|ref|ZP_07207401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus salivarius ACS-116-V-Col5a] gi|116243146|sp|Q1WTA8|CLPP_LACS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|90821337|gb|ABD99976.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus salivarius UCC118] gi|227867040|gb|EEJ74461.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus salivarius ATCC 11741] gi|300214827|gb|ADJ79243.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) [Lactobacillus salivarius CECT 5713] gi|300851122|gb|EFK78851.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus salivarius ACS-116-V-Col5a] Length = 197 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + +I ++ + DS + + ++SPGGS AG AI+ + V Sbjct: 29 IIMVSGEVNDDMANAIIAQLLFLDAQDSEKDIYMYINSPGGSVSAGLAIYDTMNFVNAD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V MAAS +++ A A S + + +P G S + Sbjct: 88 -VQTIVMGMAASMASVLATAGTKGKRFALPNSE------IMIH---QPLGGAQGQSTEIQ 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 ++ K +++ ++ + + N ++ T Sbjct: 138 IAAEHIL----------KTRKLINQILADGSGQDIETI----NKDTERDN------FMTA 177 Query: 216 AEAKKVGLIDVV 227 +A GLID + Sbjct: 178 QQAVDYGLIDGI 189 >gi|302389784|ref|YP_003825605.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermosediminibacter oceani DSM 16646] gi|302200412|gb|ADL07982.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermosediminibacter oceani DSM 16646] Length = 236 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 55/226 (24%) Query: 41 IAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFR 88 I I GQIE + +I ++ I ++ L+V L++ GG AG A+ Sbjct: 41 ITIVGQIEGHLILPPQNKTTKYEHIIPQLVAIEQNPKIEGLLVILNTIGGDVEAGLALAE 100 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKL 148 I + KP ++ V S G I+ AS+ AET+ + +P Sbjct: 101 IIASM--TKPTVSLVLGGGHSIGVPIAVASDYSFIAETA------TMTIHP--------- 143 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL--- 205 + + + + + MQD V ++ V E I + Sbjct: 144 -IRLTGLVIGV---------PQTFEYLDKMQDRV-------IKFVVEHSKIEEETLRRLM 186 Query: 206 ----VLSD--GRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 L+ G + GA+A + GLI+ VGG + L L ++ Sbjct: 187 FNTGQLARDIGTVLVGADAVRYGLINEVGGLGAAVKKLEELISEKK 232 >gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp. FRC-32] gi|254763790|sp|B9M0Y1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp. FRC-32] Length = 199 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D S +I ++ + +D + + ++SPGG AG AI+ ++ +K Sbjct: 28 IIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKA-- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T AAS G + SL S I + + + + Sbjct: 86 PVSTICVGQAASMGAFLLSGGEK--GKRFSLANSRIMIHQPLGGFQGQATDIHIH----- 138 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 + + M+ ++ L++E +K ++ + +G Sbjct: 139 ---------------AQEILRMKKKLNE-------LLAEHSGQTVEKIEADTERDYFMSG 176 Query: 216 AEAKKVGLIDVV 227 +AK G+ID + Sbjct: 177 EDAKTYGIIDSI 188 >gi|312218146|emb|CBX98092.1| similar to ATP-dependent clp protease proteolytic subunit [Leptosphaeria maculans] Length = 206 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 78/199 (39%), Gaps = 35/199 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+++D S + ++ + D+ + + ++SPGGS AG AI+ + +++ Sbjct: 30 IICLNGEVDDFMSANCVAQLLFLEADNPEKPISMYINSPGGSVSAGLAIYDTMNYIRS-- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T +AAS L++ + + V + Sbjct: 88 PVSTICMGIAASMGSLLLAGGAEGHRYILPHARV------MIHQ---------------- 125 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S ++ + K + ++D ++ Y V++ R ++ + + Sbjct: 126 PSGGYRGKASDIAD-HAKEILRIRDKLNKIYQ---SHVTKKR--TLEEIEKYMERDYFMD 179 Query: 215 GAEAKKVGLIDVVGGQEEV 233 EA G++D + + E Sbjct: 180 AQEAVDFGIVDKILEKREA 198 >gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21] gi|259585955|sp|C6E2T0|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp. M21] Length = 199 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ ++ +K Sbjct: 28 IIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKA-- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T AAS G + SLV S I + + + + Sbjct: 86 PVSTICVGQAASMGAFLLSGGEK--GKRYSLVNSRIMIHQPLGGFQGQATDIHIH----- 138 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 K + M+D +++ L++E +K ++ + +G Sbjct: 139 ---------------AKEILRMKDELNA-------LLAEHTGQSVEKVAADTERDYFMSG 176 Query: 216 AEAKKVGLIDVV 227 EAK G+ID + Sbjct: 177 EEAKNYGIIDAI 188 >gi|159039408|ref|YP_001538661.1| endopeptidase Clp [Salinispora arenicola CNS-205] gi|157918243|gb|ABV99670.1| Endopeptidase Clp [Salinispora arenicola CNS-205] Length = 213 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ ++ +D + + ++SPGGS Y+G AI+ +Q + N V T MAAS Sbjct: 50 ANRICAQLLLLAAEDPDRDINLWINSPGGSVYSGMAIYDTMQFIDND--VSTVAMGMAAS 107 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G L+ CA A + + + P Sbjct: 108 MGQLLLCAGTKGKRYALPHAR------IMMHQ-------------------PSGGMGGTA 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 S++ +A QM+ + F V+ + SD R +T EA G ID Sbjct: 143 SDIAIQAEQMLY-----TKRMFQERVAFHTGQSQAQIEADSDRDRWFTAQEAMDYGFIDK 197 Query: 227 V 227 V Sbjct: 198 V 198 >gi|30021886|ref|NP_833517.1| translocation-enhancing protein tepA [Bacillus cereus ATCC 14579] gi|218234620|ref|YP_002368598.1| clp protease [Bacillus cereus B4264] gi|228922511|ref|ZP_04085812.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954073|ref|ZP_04116102.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960002|ref|ZP_04121667.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar pakistani str. T13001] gi|229047482|ref|ZP_04193072.1| Translocation-enhancing protein tepA [Bacillus cereus AH676] gi|229071295|ref|ZP_04204518.1| Translocation-enhancing protein tepA [Bacillus cereus F65185] gi|229081051|ref|ZP_04213562.1| Translocation-enhancing protein tepA [Bacillus cereus Rock4-2] gi|229111268|ref|ZP_04240821.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-15] gi|229129072|ref|ZP_04258045.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-Cer4] gi|229151996|ref|ZP_04280192.1| Translocation-enhancing protein tepA [Bacillus cereus m1550] gi|229180074|ref|ZP_04307418.1| Translocation-enhancing protein tepA [Bacillus cereus 172560W] gi|29897442|gb|AAP10718.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 14579] gi|218162577|gb|ACK62569.1| clp protease [Bacillus cereus B4264] gi|228603283|gb|EEK60760.1| Translocation-enhancing protein tepA [Bacillus cereus 172560W] gi|228631551|gb|EEK88184.1| Translocation-enhancing protein tepA [Bacillus cereus m1550] gi|228654309|gb|EEL10174.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-Cer4] gi|228672044|gb|EEL27335.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-15] gi|228702255|gb|EEL54730.1| Translocation-enhancing protein tepA [Bacillus cereus Rock4-2] gi|228711749|gb|EEL63701.1| Translocation-enhancing protein tepA [Bacillus cereus F65185] gi|228723729|gb|EEL75084.1| Translocation-enhancing protein tepA [Bacillus cereus AH676] gi|228799745|gb|EEM46697.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805639|gb|EEM52229.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228837106|gb|EEM82446.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 249 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|317495864|ref|ZP_07954227.1| Clp protease [Gemella moribillum M424] gi|316914041|gb|EFV35524.1| Clp protease [Gemella moribillum M424] Length = 212 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + ++ + DS + ++SPGGS AG AI+ +Q +K V+T MAAS Sbjct: 41 ANSITSQLLFLEAQDSEKDIYFYINSPGGSVTAGFAIYDTMQHIKCD--VVTICMGMAAS 98 Query: 110 -AGYLISCAS-NIIVAAETSLV 129 +L++ + A + V Sbjct: 99 MGAFLLAAGTIGKRYALPNAEV 120 >gi|296446284|ref|ZP_06888230.1| Endopeptidase Clp [Methylosinus trichosporium OB3b] gi|296256185|gb|EFH03266.1| Endopeptidase Clp [Methylosinus trichosporium OB3b] Length = 211 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 70/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + +I ++ + ++ + + ++SPGG +G AI+ +Q ++ + Sbjct: 38 IIFLTGQVEDHMASVIIAQLLFLEAENPKREIFLYINSPGGVVTSGLAIYDTMQYIRPK- 96 Query: 98 PVITEVHEMAASAGYLISCA--SNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ CA + A + + + F Sbjct: 97 -VATLCIGQAASMGSLLLCAGEAGQRFALPNAR------IMVHQPSGGFQ---------- 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 + + + ++ ++ Y Y+ D + + Sbjct: 140 --GQASDILR-----HAEDIMKIKKRLNEIY-------VRHTGRDYETIEKTLDRDHFMS 185 Query: 215 GAEAKKVGLIDVV 227 EAK G++D V Sbjct: 186 AEEAKDFGIVDHV 198 >gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio fibrisolvens 16/4] Length = 194 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 67/178 (37%), Gaps = 35/178 (19%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 + ++ + +D + + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 44 TVAQLLFLESEDPSKDIHLYINSPGGSVTAGMAIYDTMQYIKCD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L++ A + V + + K + + Sbjct: 102 FLLAGGQKGKRFALPNAEV------MIHQPL----------------GGAKGQAT----- 134 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLIDVV 227 +++ + + R+++ + Y++ + ++ W EA GLID + Sbjct: 135 ---EIEIAAKNILKTREKLNRMLAANTGKDYEQVCLDTERDHWLDAQEALDYGLIDEI 189 >gi|238764860|ref|ZP_04625801.1| ATP-dependent Clp protease proteolytic subunit [Yersinia kristensenii ATCC 33638] gi|238696967|gb|EEP89743.1| ATP-dependent Clp protease proteolytic subunit [Yersinia kristensenii ATCC 33638] Length = 207 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + + ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGFQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ + ++ ++ R Sbjct: 154 REIL----------------KVKSRMNELM-----------ALHTGKSLEEIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V + + Sbjct: 187 FLSAEQAVEYGLVDSVFTRRD 207 >gi|62184864|ref|YP_219649.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila abortus S26/3] gi|81312959|sp|Q5L6P3|CLPP1_CHLAB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|62147931|emb|CAH63678.1| putative protease proteolytic subunit [Chlamydophila abortus S26/3] Length = 192 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 39/165 (23%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS--NIIVAAET 126 ++ ++SPGGS AG A++ I+ + + PV T V +AAS G ++S + A Sbjct: 54 IVFVINSPGGSVDAGFAVWDQIKMMTS--PVTTVVTGLAASMGSVLSLCAAPGRRFATPH 111 Query: 127 SLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 S + SIG P + L + + + + K + E ++ ++++ + Sbjct: 112 SRIMIHQPSIG----GP-ITGQATDLDIHAREILKTK-KRIVDVYLEATGQSREVIEKAI 165 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 D T EAK GL+D + Sbjct: 166 DRDTWM-------------------------TADEAKDFGLLDGI 185 >gi|330445073|ref|ZP_08308726.1| peptidase S49 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489264|dbj|GAA03223.1| peptidase S49 family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 226 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + + KA+ +P+ + Q ++++ F + NI K L ++ + Sbjct: 2 ITAGKHKADGNPYEALPDAVRDKWQKQLEATRLTFATKAAGYMNIDVQKVLA-TEAETFE 60 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA 239 G A G + + + + Sbjct: 61 GQAAIDAGFANEIVNGSDAIAVMAE 85 >gi|71028320|ref|XP_763803.1| ATP-dependent Clp protease proteolytic subunit [Theileria parva strain Muguga] gi|68350757|gb|EAN31520.1| ATP-dependent Clp protease proteolytic subunit, putative [Theileria parva] Length = 241 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D S ++I I RI+ +D + ++SPGGS AG AIF ++ +K Sbjct: 77 MIFLSGELNDKVSFKIISSILRINENDPNLPIKFYINSPGGSVTAGLAIFDVLRSLK--M 134 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV 129 PV T AAS +L++ + + A S + Sbjct: 135 PVETVSLGQAASMGAFLLASGTKGMRYAMPNSRI 168 >gi|114327971|ref|YP_745128.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP [Granulibacter bethesdensis CGDNIH1] gi|114316145|gb|ABI62205.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Granulibacter bethesdensis CGDNIH1] Length = 248 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 70/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D S + ++ + ++ + ++SPGG AG AI+ +Q +++ Sbjct: 73 IIFLTGAVYDQVSALICAQLLFLESENPQKEISFYINSPGGVVSAGLAIYDTMQYIRS-- 130 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS G L+ CA + A + V V + + + + + Sbjct: 131 PVSTVCIGQAASMGSLLLCAGEKDKRFALPNARV---MVHQPSGGAQGQATDIEIQAREI 187 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + + ++ + + + R + D + Sbjct: 188 LT----------------LRKRLNEIYNRHTGQSIEAIE--RKLERDT--------YMSA 221 Query: 216 AEAKKVGLIDVV 227 EA+ GL+D V Sbjct: 222 EEARDFGLVDQV 233 >gi|46241425|gb|AAS82912.1| capsid protein [Wolbachia phage WO] Length = 127 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 180 DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQS 236 VD Y FV+L++ +R + +K ++ ++ G +A ++GL D V E Sbjct: 1 KEVDRLYEMFVQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADGVTTFFEFINK 56 >gi|75764280|ref|ZP_00743823.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218898895|ref|YP_002447306.1| clp protease [Bacillus cereus G9842] gi|228902298|ref|ZP_04066457.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL 4222] gi|228909621|ref|ZP_04073444.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL 200] gi|228966741|ref|ZP_04127785.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar sotto str. T04001] gi|74488232|gb|EAO51905.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544679|gb|ACK97073.1| clp protease [Bacillus cereus G9842] gi|228792840|gb|EEM40398.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar sotto str. T04001] gi|228849910|gb|EEM94741.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL 200] gi|228857335|gb|EEN01836.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL 4222] Length = 249 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|254492068|ref|ZP_05105244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga thiooxidans DMS010] gi|224462732|gb|EEF79005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga thiooxydans DMS010] Length = 212 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 37/197 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ ++ + ++ + + ++SPGG+ AG AI+ +Q V K Sbjct: 43 VIFLVGPVEDQMANLIVAQLLFLESENPDKDIHLYINSPGGAVTAGMAIYDTMQFV---K 99 Query: 98 P-VITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P V T AAS L++ + S I V + + K Sbjct: 100 PNVSTLCIGQAASMGAVLLAGGAEGKRHCLPNSR---IMVHQPLGGFQGQASDFDIHAKE 156 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + S + ++ + + R+ D Sbjct: 157 ILS----------------IRDRLNGILAHHTGQDIEAI--RRDTDRDN--------FMN 190 Query: 215 GAEAKKVGLIDVVGGQE 231 G +A + GLID V Sbjct: 191 GEQALEYGLIDSVLTSR 207 >gi|182416350|ref|YP_001821416.1| endopeptidase Clp [Opitutus terrae PB90-1] gi|177843564|gb|ACB77816.1| Endopeptidase Clp [Opitutus terrae PB90-1] Length = 216 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 80/191 (41%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 +I + G + D ++++ E++ + D + ++SPGGS AG A+F ++ + + Sbjct: 50 KIFLWGAVTDETAKDMTEKLLYLEAVDPGKEITFYINSPGGSITAGMAVFDTMRLITS-- 107 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ V MAAS G ++ C + G YP+ + + + +S + V Sbjct: 108 PITVIVTGMAASMGSILLCGAPK------------GRRLLYPHARVLIHQPLISGRMV-- 153 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GA 216 P + K ++ ++ ++ +++S P ++ +D + Sbjct: 154 GPATDIN-----IQAKEMEKIRAELNQI-------LADSSGQPIERINQDTDRDFYLNAK 201 Query: 217 EAKKVGLIDVV 227 EA GL D + Sbjct: 202 EAIAYGLADRI 212 >gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002] gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002] Length = 197 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ + +D+ + + ++SPGGS YAG AI+ +Q+++ Sbjct: 30 RIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQLYINSPGGSVYAGMAIYDTMQQIRPN 89 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T + +AAS +L+S + +A +S + + + + V I+ Sbjct: 90 --VVTICYGIAASMGAFLLSGGTKGKRMALPSSR------IMIHQPLGGAQGQA-VDIEI 140 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K + ++D +++ L+++ P+DK ++ + Sbjct: 141 ----------------QAKEILYIKDKLNT-------LIADHTGQPFDKVAEDTERDFYM 177 Query: 214 TGAEAKKVGLIDVV 227 + EA + GLID V Sbjct: 178 SAEEACQYGLIDQV 191 >gi|148361299|ref|YP_001252506.1| hypothetical protein LPC_3273 [Legionella pneumophila str. Corby] gi|148283072|gb|ABQ57160.1| hypothetical protein LPC_3273 [Legionella pneumophila str. Corby] Length = 501 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 94/248 (37%), Gaps = 38/248 (15%) Query: 10 TRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRDDSAT 67 ++++ S + + + F + + + I+G I + L I+ D Sbjct: 64 SKFMQTSCIFIFLTLFLLVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDADL-- 121 Query: 68 ALIVSLSSPGGSAYAGEAIFRAIQK-VKNRKPVITEV---HEMAASAGYLISCASNIIVA 123 +++ + +PGG ++ IQ + + P++T V AASAG + AS + Sbjct: 122 -IVILIDTPGGL---YDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYASTLAAM 177 Query: 124 AETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 A + +G+ + E + K M++ V Sbjct: 178 APGTQMGAASPVSLGTGFSE------------------------GEKDEKKKSTMENKVT 213 Query: 184 SSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSLYALG 241 +R +++ R D +++G+ T EA G+++ + ++++ ++ + Sbjct: 214 HDAVATIRSLAQLRGRDPDFAEKAVTEGKSITANEALSKGVVNYIAKNRDDLLSQIHGIK 273 Query: 242 VDQSIRKI 249 V Q+ + I Sbjct: 274 VSQNNKTI 281 >gi|322378952|ref|ZP_08053366.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis HS1] gi|322379806|ref|ZP_08054103.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis HS5] gi|321147774|gb|EFX42377.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis HS5] gi|321148628|gb|EFX43114.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis HS1] Length = 197 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I D+ ++ ++ + +D + + ++SPGGS +G +I+ + + Sbjct: 29 IVLLSGEINDAVASTIVAQLLFLEAEDPEKDINLYINSPGGSVTSGLSIYDTMNYIHPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 + T AAS +L+SC + + + + + + + + Sbjct: 88 -ICTICIGQAASMGAFLLSCGTKGKRFSLPHAR------IMIHQPLGGTEGQATNIAIYT 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + +K + Q+M +E+ +K SD Sbjct: 141 KEILR--LKNTLN----------QIM---------------AENTGQTLEKIEQDSDRDF 173 Query: 213 W-TGAEAKKVGLIDVV 227 + + +AK+ GL+D V Sbjct: 174 FMSAEDAKEYGLVDAV 189 >gi|237742125|ref|ZP_04572606.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 4_1_13] gi|229429773|gb|EEO39985.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp. 4_1_13] Length = 367 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 46/211 (21%) Query: 30 HVEDNSPHVARIAIRGQIE----------DSQELIERIERISRDDSATALIVSLSSPGGS 79 +++ S + I I G I S + +E + + + + ++SPGG Sbjct: 11 EIKNLSENTVEIRIYGTITKWADKEYGQVSSASFAKELENY---KNVSQINLRINSPGGD 67 Query: 80 AYAGEAIFRAIQKVKN--RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQ 137 + I+ ++ + + +AASA + ++ +V IG LF Sbjct: 68 VFEASTIYNLLKDFAKVNNIQITGYIDGLAASAASFLVLCASKVVMG-------IGALFM 120 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 P G + + +Q ++D+ + + Sbjct: 121 IHN--PLTYAYG--------------------NTAELQKQIQ-LLDTVKESILDIYCTKS 157 Query: 198 NIPYDKTLVLSDGRIWT-GAEAKKVGLIDVV 227 + ++ + W EA + G +D + Sbjct: 158 KLNREEIAEKMNNEKWFRANEALEAGFVDEI 188 >gi|218439262|ref|YP_002377591.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC 7424] gi|218171990|gb|ACK70723.1| Endopeptidase Clp [Cyanothece sp. PCC 7424] Length = 199 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 69/181 (38%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ + + +D + + ++SPGGS AG AI+ +Q +K+ V+T +AAS Sbjct: 44 ANRIVAFLLYLDSEDPNKPIYLYINSPGGSVTAGMAIYDTMQYIKSE--VVTICVGLAAS 101 Query: 110 -AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A S + + PM Sbjct: 102 MGSFLLAAGTPGKRLALPHSR------IMIHQ-------------------PMGGTGR-- 134 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 + ++ + ++++E ++ +D + + EA++ GLID Sbjct: 135 RQATDIEIEA--KEILRIRQQLNQMLAERTGKTLEQIEKDTDRDYFMSPYEAQEYGLIDK 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|75764057|ref|ZP_00743661.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488455|gb|EAO52067.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 244 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 42/199 (21%) Query: 31 VEDNSPHVARIAIRGQIEDSQELIERIERISRDDSATALI----------VSLSSPGGSA 80 +++ + A + I G I ++ + DD ++ + ++S GGS Sbjct: 18 IKNQTDSSADLFIYGDIINNTGWKWDDSDVMPDD-VKNILGQLDDKSNLNIYVNSGGGSV 76 Query: 81 YAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPY 140 +AG AI+ +++ K +K V +AAS +I+ A + +V + L + Sbjct: 77 FAGLAIYNMLKRNKAQKTVYV--DGVAASIASVIALAGDRVVVPSNAF------LMVH-- 126 Query: 141 VKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIP 200 +V + ++ + + ++ + + Y ++ I Sbjct: 127 ----------KPWTVSRGN----ANVLRKM-AEDLDNLEAGIMNVYKENLKE-----GIE 166 Query: 201 YDKTLVLSDGRIW-TGAEA 218 + L D W +G EA Sbjct: 167 MEVIQQLVDAETWLSGEEA 185 >gi|229031427|ref|ZP_04187427.1| Translocation-enhancing protein tepA [Bacillus cereus AH1271] gi|228729716|gb|EEL80696.1| Translocation-enhancing protein tepA [Bacillus cereus AH1271] Length = 249 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|157964626|ref|YP_001499450.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia massiliae MTU5] gi|157844402|gb|ABV84903.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia massiliae MTU5] Length = 216 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 29/187 (15%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 ++ ++ + ++ + + ++SPGG AG AI+ +Q +K + V T A S G Sbjct: 59 IVAQLLFLEAENPKKDIYIYINSPGGVVTAGLAIYDTMQYIKPK--VATLCIGQACSMGS 116 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 L+ C G+ + P+ + + + S K + + E++ Sbjct: 117 LLLCGGEQ------------GMRYSLPHSRIMIHQP--------SGGYKGQATDI-EIHA 155 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 + ++ +++ Y + ++ + EAKK GL+D + + Sbjct: 156 QETLKIKRLLNELYSKHTGQELKHIEKSMERDN------FMSPEEAKKFGLVDNIISSRD 209 Query: 233 VWQSLYA 239 V L Sbjct: 210 VIALLAK 216 >gi|94310823|ref|YP_584033.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus metallidurans CH34] gi|116243154|sp|Q1LM62|CLPP_RALME RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|93354675|gb|ABF08764.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases [Cupriavidus metallidurans CH34] Length = 216 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 51 VVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPD- 109 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S + + + + + Sbjct: 110 -VQTLCMGMAASMGAFLLAAGAKGKRSALPNSR------IMIHQPLGGARGQASDIEIQA 162 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V ++ R+ D Sbjct: 163 REILY----------------LRERLNSILSEVTGQPVEKIA--RDTDRDN--------F 196 Query: 213 WTGAEAKKVGLIDVV 227 +G +A GLID V Sbjct: 197 MSGDQAVDYGLIDKV 211 >gi|291536145|emb|CBL09257.1| Protease subunit of ATP-dependent Clp proteases [Roseburia intestinalis M50/1] Length = 217 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 87/224 (38%), Gaps = 49/224 (21%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++ + I G+IE + ++ ++ + + L++ L++ GG + Sbjct: 21 KNKISLLTIIGEIEGHDCLPATTKTTKYEHVLPKLAELEDNPDTEGLLLLLNTVGGDVES 80 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G AI I ++ KP ++ V + S G ++ +++ + G + +P Sbjct: 81 GLAIAEMIASIR--KPTVSLVLGGSHSIGVPLAVSTDYSFIVPS------GTMVIHP--- 129 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 + +S + + P + MQD + F+ S++ + Sbjct: 130 -----VRMSGTVIGAKPTYDYF-----------KQMQDRI----VHFISTHSKASEKRLE 169 Query: 203 KTLVLSD------GRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 + ++ + G I G EA + GLI+ VGG + + L+ + Sbjct: 170 ELMMNTGILTKDLGTILVGKEAVEEGLINEVGGISDAFSRLHQM 213 >gi|237753395|ref|ZP_04583875.1| ATP-dependent clp protease proteolytic subunit [Helicobacter winghamensis ATCC BAA-430] gi|229375662|gb|EEO25753.1| ATP-dependent clp protease proteolytic subunit [Helicobacter winghamensis ATCC BAA-430] Length = 196 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 79/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQI+D + ++ ++ + +D + + ++SPGG +G +I+ + VK Sbjct: 30 IILLSGQIDDGLASSIVAQLLFLEAEDPEKDIYLYINSPGGVVTSGLSIYDTMNYVKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T AAS +L+SC + + S + + +P G + + Sbjct: 89 -ISTICIGQAASMGAFLLSCGTKGKRYSLPNSR------IMIH---QPLGGAQGQATEI- 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ ++ ++ + N P +K +D + + Sbjct: 138 -------------EIQAKEILRLKSSLNEI-------LASNTNQPLEKIAKDTDRDFYLS 177 Query: 215 GAEAKKVGLIDVV 227 EA++ GLID V Sbjct: 178 AKEAQEYGLIDSV 190 >gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga lettingae TMO] gi|167008651|sp|A8F754|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga lettingae TMO] Length = 199 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 38/194 (19%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K+ Sbjct: 32 RIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIYDTMQYIKSD 91 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T AAS A L++ + A + + + + Sbjct: 92 --VVTICVGQAASMAAVLLASGTKGKRFALPNAR------IMLHQPLGGAE--------- 134 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 P+K E+ K + +++++++ +SE P D+ +D + Sbjct: 135 ---GPVKDV-----EIITKELLRIKNLINTI-------LSEKTGQPLDRIEKDTDRDFFM 179 Query: 214 TGAEAKKVGLIDVV 227 + EA GL+D V Sbjct: 180 SAYEALDYGLVDKV 193 >gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. CC9311] gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus sp. CC9311] Length = 200 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ +Q VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMQYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A S + + + + I+ Sbjct: 102 MGAFLLTAGTKGKRLALPHSR------IMIHQPLGGTAQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A +++ R +++ ++K +D + + AEAK GLID Sbjct: 143 -----EAREIL-----RMKEMLNRSMADMTGQSFEKIEKDTDRDYFLSAAEAKDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|240950423|ref|ZP_04754674.1| putative Clp-like protease [Actinobacillus minor NM305] gi|240295043|gb|EER45899.1| putative Clp-like protease [Actinobacillus minor NM305] Length = 676 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 84/254 (33%), Gaps = 50/254 (19%) Query: 31 VEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAI 86 ++ A I+I +I +Q+ + ++ + + + + + SPGG + G AI Sbjct: 28 IKAAKNDTAEISIYDEIGFWGVTAQQFAKDLKALGNN--LKQINLHIHSPGGDVFDGIAI 85 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLD 146 + ++ K + +AAS +I+ A N I+ E ++ + + Sbjct: 86 YNLLKNHPANK--TVYIDGLAASMASVIAMAGNEIIMPENAM------MMIH-------- 129 Query: 147 KLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLV 206 ++ + D++D + + Sbjct: 130 ----KPWGIQGGDADDM------------RKYADLLDKVESTLITAYTAKTGKSETDLAE 173 Query: 207 LSDGRIW-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWN----PPKNYWFC 261 + W TG E + G D + L A+ QS +K++D+ KN F Sbjct: 174 MLKVETWLTGKECIEQGFADKLADP------LVAMACIQS-KKLEDYTNMPETIKNMLFK 226 Query: 262 DLKNLSISSLLEDT 275 N ++ + Sbjct: 227 PQGNAGAATPTPEQ 240 >gi|169829177|ref|YP_001699335.1| hypothetical protein Bsph_3721 [Lysinibacillus sphaericus C3-41] gi|168993665|gb|ACA41205.1| Hypothetical yqeZ protein [Lysinibacillus sphaericus C3-41] Length = 428 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 5/94 (5%) Query: 57 IERI---SRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYL 113 +ER +++++A A+I+ + +PGG A I + I +++ A SAG Sbjct: 35 LERAFNEAKENNAKAIILDIHTPGGFVNAASDIAMLMDATDIW--TIAFINKDAHSAGAF 92 Query: 114 ISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDK 147 ++ ++ I +G+ V+ Sbjct: 93 LALHADEIYMVPNGTIGAAAVIDSAGNTADLKAN 126 >gi|168701666|ref|ZP_02733943.1| ATP-dependent Clp protease proteolytic subunit [Gemmata obscuriglobus UQM 2246] Length = 208 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 37/179 (20%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA-G 111 +I+++ + + + + + ++SPGGS A AI+ +Q +++ P+ T +AAS Sbjct: 55 VIKQLLYLEYEKKSEDISLYINSPGGSVSATLAIYDTMQFMQS--PINTFCMGLAASGAA 112 Query: 112 YLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLG--VSIKSVKSSPMKAEPSPFS 168 L++ S A S V + ++G VS ++++ + Sbjct: 113 VLLAAGSPKKRYAMPNSKV----------MIHQPYGQVGGQVSDIEIQANEILR------ 156 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVV 227 + +++ V +++ R DK + EAK GL+D V Sbjct: 157 -----ERGRLNEILAKHTGQPVEIIA--RETDRDK--------YYHADEAKAFGLVDEV 200 >gi|52145322|gb|AAU29365.1| putative capsid protein [Wolbachia phage WO] Length = 116 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 178 MQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 +Q VD Y F++L++ +R + +K ++ ++ G +A ++G+ D V E Sbjct: 5 LQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 >gi|88800033|ref|ZP_01115603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea sp. MED297] gi|88777159|gb|EAR08364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea sp. MED297] Length = 209 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 47/198 (23%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ +Q + K Sbjct: 45 VIFLVGQVEDYMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGMAIYDTMQFI---K 101 Query: 98 PVITEVH-EMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P ++ + AAS L++ + S + + + + + Sbjct: 102 PDVSTMCIGQAASMGALLLTGGAKGKRYCLPNSR------MMIHQPLGGYQGQATDIEIH 155 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + + + +++ + P + +D R Sbjct: 156 AREIL----------------EMKRRLNEIM-----------AHHTGRPLEDVERDTD-R 187 Query: 212 --IWTGAEAKKVGLIDVV 227 T +A GL+D V Sbjct: 188 DNFMTAEQAVDYGLVDQV 205 >gi|296126231|ref|YP_003633483.1| hypothetical protein Bmur_1190 [Brachyspira murdochii DSM 12563] gi|296018047|gb|ADG71284.1| protein of unknown function DUF107 [Brachyspira murdochii DSM 12563] Length = 447 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 18/201 (8%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGY 112 + + I++ S D +A +I+ L +PGG + +I I ++++ PV +++ A SAG Sbjct: 49 IKKAIDKASED-NAKLIILELDTPGGLLSSALSIKNYI--IESKVPVAVYINKNALSAGA 105 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 LIS ++ I ++ S++G+ ++ + +S A +E Sbjct: 106 LISLSAKEIYMSDGSVIGAATPVYLNGNESKKASEKEISAMR-------AAMRASAETTK 158 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEE 232 K ++ + +VD + + L E+ I D +L+ + EA ++ + D E Sbjct: 159 KNIKAAEAMVDET----IVLTKENDGIDLDNKTLLT----LSADEAVRINIADNKANSIE 210 Query: 233 VWQSLYALGVDQSIRKIKDWN 253 L + + I +++ Sbjct: 211 EIIKLKNMNDNYEIITVEEEK 231 >gi|242345576|ref|YP_002995462.1| hypothetical protein M102_gp05 [Streptococcus phage M102] gi|154238317|emb|CAO77355.1| hypothetical protein [Streptococcus phage M102] Length = 298 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 47/191 (24%) Query: 45 GQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVIT 101 G I D ++++I I D + + L+S GGS +AG I+ ++ + Sbjct: 22 GGITDYTIAEDIISDIRNSEDD-----ITLILNSGGGSYFAGAEIYSELKASNQKS--TA 74 Query: 102 EVHEMAASAGYLISCASNIIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 + +A SA +++ + V +E++ + +IG + +K L S+ + Sbjct: 75 YIASLAGSASAILAMGATKRVISESAQLMFHQSAIGAFGKSQDLKEVSQML----DSIDA 130 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE 217 + + S + + FV Sbjct: 131 G-IAEVLTANSSLTKDEAKDFIST-----DNFVD-----------------------AQR 161 Query: 218 AKKVGLIDVVG 228 A + L+D +G Sbjct: 162 ALDLKLVDEIG 172 >gi|261880976|ref|ZP_06007403.1| ATP-dependent Clp protease proteolytic subunit [Prevotella bergensis DSM 17361] gi|270332280|gb|EFA43066.1| ATP-dependent Clp protease proteolytic subunit [Prevotella bergensis DSM 17361] Length = 346 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 43/202 (21%) Query: 41 IAIRGQIED------SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 I + G I D S ++ + + + + ++S GG Y G AIF A++ K Sbjct: 16 ILLYGDIGDNYGAVTSGQITRELMAAE--SAYKNIDIRINSVGGEVYTGIAIFNALRASK 73 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + V +AAS +I+ + + + L + Sbjct: 74 AN--ITLYVDGVAASMASVIALCGKPVYMSRYAR------LMLHSVSGGCY--------- 116 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDG-RI 212 K + ++ M+ + D+ + +E DG Sbjct: 117 ---GNKKDL--------KEVLEQMESLEDTLCQMY----AERLGKDAAAVKAAYFDGTDH 161 Query: 213 W-TGAEAKKVGLIDVVGGQEEV 233 W T EA +GLID + + V Sbjct: 162 WLTADEALSLGLIDGIYDADPV 183 >gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus DK 1622] gi|116270726|sp|Q1DAT0|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus xanthus DK 1622] Length = 206 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 82/217 (37%), Gaps = 53/217 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + +I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q VK Sbjct: 31 IVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKC-- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 PV T AAS L+ + A +S + G GV Q + Sbjct: 89 PVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLG--GVRGQATDI-------- 138 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 E+ K + M+ ++ L+ + ++ +D Sbjct: 139 -------------------EIQAKEILRMKAKLNE-------LIVKHTGQSIERVEKDTD 172 Query: 210 GRIWTGA-EAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + GA EAK G+ID + +V LG ++ Sbjct: 173 RDYFMGASEAKAYGIIDEIQNPRKVV----GLGKEEK 205 >gi|91787906|ref|YP_548858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas sp. JS666] gi|91697131|gb|ABE43960.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas sp. JS666] Length = 218 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + ++SPGGS AG AI+ +Q +K Sbjct: 53 VIFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPD- 111 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVS 151 V T MAAS +L+S + + S V S G Q ++ + + Sbjct: 112 -VSTLCVGMAASMGAFLLSAGAKGKRFSLPNSRVMIHQPSGGAQGQATDIEIHARDILKT 170 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + + ++ ++ + Y F Sbjct: 171 RDQL--------NRILAANTGQPIEKIERDTERDYFLF---------------------- 200 Query: 212 IWTGAEAKKVGLIDVV 227 +AK+ GL+D V Sbjct: 201 ---AEDAKEYGLVDQV 213 >gi|77020879|gb|ABA60431.1| capsid protein [Wolbachia phage WO] Length = 115 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 ESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 53 >gi|294500553|ref|YP_003564253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus megaterium QM B1551] gi|294350490|gb|ADE70819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus megaterium QM B1551] Length = 193 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I +I D + ++ ++ ++ DD + + ++SPGGS AG AI+ +Q ++ Sbjct: 29 IILIGDEINDHIANSVVAQLLFLAADDPKKDISLYINSPGGSTSAGFAIYDTMQYIEPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS L+ + A S + + + + + Sbjct: 88 -VQTICTGMAASFGALLLLAGAKGKRYALPNSE------IMIHQPLGGARGQA----TEI 136 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E++ + + ++ ++ +S P +K ++ + + Sbjct: 137 -------------EISARRILKLKQHINEI-------ISTRTGQPVEKVANDTERDYFMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ G+ID + Sbjct: 177 AEEAKEYGVIDGI 189 >gi|30263799|ref|NP_846176.1| hypothetical protein BA_3932 [Bacillus anthracis str. Ames] gi|47529224|ref|YP_020573.1| hypothetical protein GBAA_3932 [Bacillus anthracis str. 'Ames Ancestor'] gi|49186646|ref|YP_029898.1| hypothetical protein BAS3647 [Bacillus anthracis str. Sterne] gi|65321124|ref|ZP_00394083.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus anthracis str. A2012] gi|165872618|ref|ZP_02217249.1| clp protease [Bacillus anthracis str. A0488] gi|167635861|ref|ZP_02394170.1| clp protease [Bacillus anthracis str. A0442] gi|167639876|ref|ZP_02398145.1| clp protease [Bacillus anthracis str. A0193] gi|170687843|ref|ZP_02879057.1| clp protease [Bacillus anthracis str. A0465] gi|177652109|ref|ZP_02934655.1| clp protease [Bacillus anthracis str. A0174] gi|190568387|ref|ZP_03021294.1| clp protease [Bacillus anthracis Tsiankovskii-I] gi|227813295|ref|YP_002813304.1| clp protease [Bacillus anthracis str. CDC 684] gi|229601887|ref|YP_002868036.1| clp protease [Bacillus anthracis str. A0248] gi|254683496|ref|ZP_05147356.1| clp protease [Bacillus anthracis str. CNEVA-9066] gi|254722017|ref|ZP_05183806.1| clp protease [Bacillus anthracis str. A1055] gi|254735835|ref|ZP_05193541.1| clp protease [Bacillus anthracis str. Western North America USA6153] gi|254739639|ref|ZP_05197333.1| clp protease [Bacillus anthracis str. Kruger B] gi|254755988|ref|ZP_05208019.1| clp protease [Bacillus anthracis str. Vollum] gi|254759351|ref|ZP_05211376.1| clp protease [Bacillus anthracis str. Australia 94] gi|30258443|gb|AAP27662.1| clp protease [Bacillus anthracis str. Ames] gi|47504372|gb|AAT33048.1| clp protease [Bacillus anthracis str. 'Ames Ancestor'] gi|49180573|gb|AAT55949.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|164711650|gb|EDR17196.1| clp protease [Bacillus anthracis str. A0488] gi|167512277|gb|EDR87654.1| clp protease [Bacillus anthracis str. A0193] gi|167528818|gb|EDR91576.1| clp protease [Bacillus anthracis str. A0442] gi|170668159|gb|EDT18908.1| clp protease [Bacillus anthracis str. A0465] gi|172082478|gb|EDT67543.1| clp protease [Bacillus anthracis str. A0174] gi|190560391|gb|EDV14369.1| clp protease [Bacillus anthracis Tsiankovskii-I] gi|227006134|gb|ACP15877.1| clp protease [Bacillus anthracis str. CDC 684] gi|229266295|gb|ACQ47932.1| clp protease [Bacillus anthracis str. A0248] Length = 249 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLIVLNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|253575671|ref|ZP_04853007.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14] gi|251845009|gb|EES73021.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14] Length = 196 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + +I ++ ++ +D + + ++SPGGS AG I+ +Q +K Sbjct: 29 IIFLSNAIDDEVANLVIAQLLFLAAEDPEKDIHLYINSPGGSVTAGMGIYDTMQYIKPD- 87 Query: 98 PVITEVHEMAASAGYLI--SCASNIIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 V T MAAS G L+ + A A S V G GV Q +K D + Sbjct: 88 -VSTICVGMAASMGSLLLTAGAPGKRYALPNSEVMIHQPLG--GVRGQATDIKIHADWI- 143 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 +K+ + ++ Y E P +K +D Sbjct: 144 -----IKT---------------------RQKLNQIY-------VERTGQPLEKIERDTD 170 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + + EAK G+ID V Sbjct: 171 RDFFMSAEEAKAYGIIDQV 189 >gi|254444431|ref|ZP_05057907.1| hypothetical protein VDG1235_2671 [Verrucomicrobiae bacterium DG1235] gi|198258739|gb|EDY83047.1| hypothetical protein VDG1235_2671 [Verrucomicrobiae bacterium DG1235] Length = 507 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 8/120 (6%) Query: 32 EDNSPHVARIAIRGQIEDSQELIERIE---RISRDDSATALIVSLSSPGGSAYAGEAIFR 88 E I + G I Q + + + + D+ A+++ + +PGG + I Sbjct: 61 ESAGSKFYVIPVEGPI--GQPTLFAVRGGVKTAIDEGYDAVVLDMDTPGGRLDSTLEIME 118 Query: 89 AIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIG-VLFQYPYVKPFLDK 147 + + R +T V++ A SAG +I+ ++ I +++GS V Q + + + Sbjct: 119 ILDRFPGR--TMTFVNDEAISAGAIIASVTDEIYFTSKAVIGSAEPVTGQGQDINESMKR 176 >gi|188997265|ref|YP_001931516.1| protein of unknown function DUF107 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932332|gb|ACD66962.1| protein of unknown function DUF107 [Sulfurihydrogenibium sp. YO3AOP1] Length = 429 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 39/217 (17%) Query: 52 ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAA 108 + + RI + + SA A+I+ L +PGG + I + IQ K P I V AA Sbjct: 34 DYVNRIVNTAEEKSAKAIILQLDTPGGLETSIREIIKTIQ--KTDIPFIVYVYPKGARAA 91 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SAG +I+ ++++ A + +GS SP S Sbjct: 92 SAGAIITISADVAAMAPATNIGS--------------------------------ASPVS 119 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI-WTGAEAKKVGLIDVV 227 + M+ V + FV+ +++ + + + I T EA K +ID++ Sbjct: 120 MEGKDIEETMKKKVMNDMVAFVKSIAKEKGRNEEIAEKMITESINLTSEEALKSKIIDII 179 Query: 228 G-GQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDL 263 ++ L V ++ ++I + F +L Sbjct: 180 AEDLNDLILKLDGKKVIKNNKEITLNLKNQPIEFVEL 216 >gi|83954269|ref|ZP_00962989.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp. NAS-14.1] gi|83841306|gb|EAP80476.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp. NAS-14.1] Length = 219 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 37/200 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + + + ++SPGG +G +I+ +Q +K + Sbjct: 38 IIFLNGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPK- 96 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A G+ F P + + + S Sbjct: 97 -VSTLVIGQAASMGSLLLQAGEK------------GMRFSLPNSRVMVHQP--------S 135 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGA 216 + + + ++ + Q ++ ++ Y + P +K L + Sbjct: 136 GGYQGQATDI-MIHAQETQKLKTRLNEIY-------VKHTGQPLEKVEAALERDNFMSPE 187 Query: 217 EAKKVGLIDVV----GGQEE 232 EAK GLID + G ++ Sbjct: 188 EAKDWGLIDEIVENRGKMDD 207 >gi|296111257|ref|YP_003621639.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii IMSNU 11154] gi|295832789|gb|ADG40670.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii IMSNU 11154] Length = 201 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I ++G++EDS ++ ++ + D + + ++SPGGS AG +I + +K Sbjct: 27 IILVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIKA-- 84 Query: 98 PVITEVHEMAASAGYLISCASNI 120 PV T V +AAS G +I+ + Sbjct: 85 PVTTIVMGLAASMGTIIASSGEK 107 >gi|281486999|gb|ADA71051.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Query: 176 QMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQ 235 + +Q VD Y FV+L++ +RN+ ++ ++ G +A ++G+ D V E Sbjct: 3 ESLQREVDRLYEMFVQLIARNRNLSIQAIKS-TEAGLYFGEKAVEIGVADGVTTFFEFIN 61 Query: 236 SLYALGVDQSIRKIKD 251 + + V + ++ + Sbjct: 62 NHKSRSVSMTTNELTE 77 >gi|257068141|ref|YP_003154396.1| ATP-dependent Clp protease proteolytic subunit ClpP [Brachybacterium faecium DSM 4810] gi|256558959|gb|ACU84806.1| ATP-dependent Clp protease proteolytic subunit ClpP [Brachybacterium faecium DSM 4810] Length = 210 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 39/185 (21%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH-EM 106 E++ + ++ ++ +D + + ++SPGGS AG AI+ +Q V KP + V M Sbjct: 45 ENANAICSKLLLLAAEDPDKDIYLYINSPGGSITAGMAIYDTMQFV---KPDVVTVGMGM 101 Query: 107 AAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEP 164 AAS +L+S + A + VL L LG + +K Sbjct: 102 AASMGQFLLSSGTKGKRYATPHTR-----VLM-----HQPLGGLGGTATDIK-------- 143 Query: 165 SPFSEVNPKAVQMMQ-DVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVG 222 +Q D++ S L++E + ++ SD W T EA + G Sbjct: 144 -------------IQADLILSMKRTLAELIAEQTDKSVEQITADSDRDKWFTATEALEYG 190 Query: 223 LIDVV 227 ID + Sbjct: 191 FIDKI 195 >gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga neapolitana DSM 4359] gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga neapolitana DSM 4359] Length = 200 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + I+D + +I ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 36 IVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIYDTMQYIKCD- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS A L++ + A + + + + Sbjct: 95 -VSTICVGQAASMAAVLLAAGTKGKRYALPNAR------IMIHQPLGGAE---------- 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 P K V+++ + R++S+ P +K +D + + Sbjct: 138 --GPAKD------------VEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMS 183 Query: 215 GAEAKKVGLIDVV 227 EAK+ G++D V Sbjct: 184 AEEAKEYGIVDKV 196 >gi|310641612|ref|YP_003946370.1| peptidase s14 clpp [Paenibacillus polymyxa SC2] gi|309246562|gb|ADO56129.1| Peptidase S14 ClpP [Paenibacillus polymyxa SC2] Length = 282 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 57/255 (22%) Query: 27 WSSHVEDNSPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLS 74 + + + ++ + I GQIE + +I ++ ++ L++ L+ Sbjct: 38 GQTSMPGSESNIFCMTIIGQIEGHLILPPQNKTTKYEHIIPQLVAAEQNPRIEGLMILLN 97 Query: 75 SPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGV 134 + GG AG AI I + KP +T V S G I+ +S AE++ Sbjct: 98 TVGGDVEAGLAIAEMIASMS--KPTVTIVIGGGHSIGVPIAVSSTYSYIAESA------T 149 Query: 135 LFQYP-YVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 + +P + + +GV + ++ MQ+ V VR V Sbjct: 150 MTIHPIRMSGLV--IGV------------------PQTFEYMEKMQERV-------VRFV 182 Query: 194 SESRNIPYDKTLVL--SDGRI-------WTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQ 244 I ++ L G + G +A K GL+D VGG E + L + + Sbjct: 183 VSHSRITEERFKELMFKTGELNRDIGTAVGGIDAVKYGLMDAVGGIGEALKQLNTIIEAR 242 Query: 245 SIRKIKDWNPPKNYW 259 + P ++ + Sbjct: 243 RQQNGMTGTPQQSPY 257 >gi|124026830|ref|YP_001015945.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL1A] gi|123961898|gb|ABM76681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. NATL1A] Length = 218 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + DD + + ++SPGGS AG AI+ +Q+V VIT + +AAS Sbjct: 63 ADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLAIYDTMQQVSPD--VITICYGLAAS 120 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L+S + +A S + + + + V I+ Sbjct: 121 MGAFLLSGGTKGKRLALPNSR------IMIHQPLGGAQGQA-VEIEI------------- 160 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 K + +++ ++ L++E K +D + + EA + GLID Sbjct: 161 ---QAKEILYLKETLN-------SLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDK 210 Query: 227 V 227 V Sbjct: 211 V 211 >gi|54295797|ref|YP_128212.1| hypothetical protein lpl2887 [Legionella pneumophila str. Lens] gi|53755629|emb|CAH17131.1| hypothetical protein lpl2887 [Legionella pneumophila str. Lens] Length = 501 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 94/252 (37%), Gaps = 38/252 (15%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQI--EDSQELIERIERISRD 63 K ++++ S + + + F + + + I+G I + L I+ Sbjct: 60 KIRLSKFMQTSCIFIFLTLFLLVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDA 119 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQK-VKNRKPVITEV---HEMAASAGYLISCASN 119 D +++ + +PGG ++ IQ + + P++T V AASAG + AS Sbjct: 120 DL---IVILIDTPGGL---YDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYAST 173 Query: 120 IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQ 179 + A + +G+ + E + K M+ Sbjct: 174 LAAMAPGTQMGAASPVSLGTGFSE------------------------GEKDEKKKSTME 209 Query: 180 DVVDSSYHWFVRLVSESRNIPYD-KTLVLSDGRIWTGAEAKKVGLIDVVG-GQEEVWQSL 237 + V +R +++ R D +++G+ T EA G+++ + ++++ + Sbjct: 210 NKVTHDAVATIRSLAQLRGRDLDFAEKAVTEGKSITANEALSKGVVNYIAKNRDDLLSQI 269 Query: 238 YALGVDQSIRKI 249 + V Q+ + I Sbjct: 270 NGIKVSQNNKTI 281 >gi|157164595|ref|YP_001465991.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter concisus 13826] gi|112801723|gb|EAT99067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter concisus 13826] Length = 196 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+IED + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 30 IVMLSGEIEDGMAASIVAQLLFLEAEDPDKDIYLYINSPGGVITSGFSIYDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + A S + + + Sbjct: 89 -VCTICIGQAASMGAFLLSCGAPGKRYALPNSR------IMIHQPLGGA----------- 130 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ + + ++++++ +++++ K + ++ + + Sbjct: 131 -RGQATDI-----EIQAREILRLKEILN-------GILAKNTGQKLSKIVKDTERDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 AEAK+ GL+D + Sbjct: 178 SAEAKEYGLVDKI 190 >gi|52145340|gb|AAU29374.1| putative capsid protein [Wolbachia phage WO] Length = 118 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 177 MMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +Q VD Y F +L++ +R + +K ++ ++ G +A ++GL D Sbjct: 4 KLQKEVDRLYEMFAQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 52 >gi|77020877|gb|ABA60430.1| capsid protein [Wolbachia phage WO] Length = 115 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 +++ +Q VD Y F++L++ +R + +K ++ ++ G +A ++GL D Sbjct: 1 ESLGSLQKEVDRLYEMFLQLIARNRGLSIEKIRS-TEAGLYFGEKAVEIGLADG 53 >gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium erythraeum IMS101] gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium erythraeum IMS101] Length = 231 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G D + + ++ + +D + + ++SPGGS AG AI+ +Q+V+ Sbjct: 53 RIIFLGTQVDENLANTITAQMLFLDAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVRPD 112 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T + +AAS +L+S + ++ +S + + + + V I+ Sbjct: 113 --VVTICYGLAASMGAFLLSGGAKGKRMSLPSSR------IMIHQPLGGAQGQA-VDIEI 163 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 K ++N L++E P +K V ++ + Sbjct: 164 ----QAKEILYHKRKLNE-------------------LLAEHTGQPLEKIEVDTERDFFM 200 Query: 214 TGAEAKKVGLIDVV 227 + EAK GLID V Sbjct: 201 SAEEAKNYGLIDQV 214 >gi|229017470|ref|ZP_04174371.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus AH1273] gi|229023686|ref|ZP_04180178.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus AH1272] gi|228737611|gb|EEL88115.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus AH1272] gi|228743794|gb|EEL93895.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus AH1273] Length = 197 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 31/149 (20%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++S GGS +AG AI+ +++ K +K V +AAS +I+ A + +V + Sbjct: 20 IYVNSGGGSVFAGLAIYNMLKRNKAQK--TVYVDGVAASIASVIALAGDRVVVPSNAF-- 75 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 L + KP+ G SI K++ + + ++ + + Y + Sbjct: 76 ----LMIH---KPWTYADGNSIDFRKAA--------------EDLDNIESGIMNVYKENL 114 Query: 191 RLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 + I ++ L D W +G EA Sbjct: 115 KE-----GIEIEEIQQLVDAETWLSGEEA 138 >gi|149177148|ref|ZP_01855755.1| hypothetical protein PM8797T_27110 [Planctomyces maris DSM 8797] gi|148844040|gb|EDL58396.1| hypothetical protein PM8797T_27110 [Planctomyces maris DSM 8797] Length = 797 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Query: 35 SPHVARIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQK 92 +P V I + G IE E L +I R + A LI + S GG +G + I Sbjct: 320 APKVMLIKVDGMIEPLLEAFLERQINRAV-NSGANMLIFEIDSGGGYLMSGTNLANMIAD 378 Query: 93 V-KNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL 135 + + + + + A S+ +I+ + I + G G + Sbjct: 379 LDSRQVRTVAYIPDHAMSSAAIIALGCDEIFMRPGAQTGDAGPI 422 >gi|238751006|ref|ZP_04612502.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei ATCC 43380] gi|238710696|gb|EEQ02918.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei ATCC 43380] Length = 207 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + + ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGFQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 K + K M +++ + ++ ++ R Sbjct: 154 KEIL----------------KVKSRMNELM-----------AHHTGKSLEEIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V + + Sbjct: 187 FLSAEQAVEYGLVDSVFTRRD 207 >gi|52082006|ref|YP_080797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus licheniformis ATCC 14580] gi|52787393|ref|YP_093222.1| ATP-dependent Clp protease proteolytic subunit [Bacillus licheniformis ATCC 14580] gi|319647870|ref|ZP_08002088.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp. BT1B_CT2] gi|67460468|sp|Q65EI5|CLPP1_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|52005217|gb|AAU25159.1| ATP-dependent Clp protease proteolytic subunit (class III heat-shock protein) [Bacillus licheniformis ATCC 14580] gi|52349895|gb|AAU42529.1| ClpP [Bacillus licheniformis ATCC 14580] gi|317390211|gb|EFV71020.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp. BT1B_CT2] Length = 198 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K + Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPQ- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + + + Sbjct: 88 -VSTICTGMAASMGAFLLAAGEKGKRYALPNSEV------MIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + S ++++E P + +D + T Sbjct: 134 -----------------TEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKT 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 AEEAKEYGLIDKV 189 >gi|326330783|ref|ZP_08197084.1| Clp protease [Nocardioidaceae bacterium Broad-1] gi|325951313|gb|EGD43352.1| Clp protease [Nocardioidaceae bacterium Broad-1] Length = 222 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ +S +D + + ++SPGGS AG AI+ + + N V T +A Sbjct: 54 QNANAICAQLLLLSAEDPEADIFLHINSPGGSVDAGMAIYDTMNYIPND--VATVGMGLA 111 Query: 108 ASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + CA A + + + P Sbjct: 112 ASMGQFLLCAGAKGKRYALPHAR------IMMHQ-------------------PSSGMGG 146 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 S++ +A Q + + L+SE ++ V +D R +T AEA GL+ Sbjct: 147 SASDIKIQAQQSL-----HIKKVLLELISEHTGQSVEQVTVDADRDRWFTAAEALDYGLV 201 Query: 225 DVV 227 D V Sbjct: 202 DQV 204 >gi|308050308|ref|YP_003913874.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas balearica DSM 9799] gi|307632498|gb|ADN76800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas balearica DSM 9799] Length = 207 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 45/206 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + ++ ++ + ++ + + ++SPGGS AG +I+ +Q +K Sbjct: 38 VIFLTGPVEDHMANLVVAQLLFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + + Sbjct: 97 -VSTVCMGQAASMGAFLLAGGAKGKRHVLPNSRV------MIHQPLGGFQGQASDIAIHA 149 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR- 211 + + K L++E P + +D R Sbjct: 150 QEILGIKHKLNL---------------------------LLAEHTGQPMEVIERDTD-RD 181 Query: 212 -IWTGAEAKKVGLIDVVGGQEEVWQS 236 + +A + GL+D V + Sbjct: 182 NFMSATDAVEYGLVDSVLTRRAADAE 207 >gi|307245367|ref|ZP_07527455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254322|ref|ZP_07536160.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258780|ref|ZP_07540512.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853708|gb|EFM85925.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862621|gb|EFM94577.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867131|gb|EFM98987.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 652 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Query: 30 HVEDNSPHVARIAIRGQIE----DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEA 85 ++ + A I+I +I +Q+ + ++ + + + + + SPGG + G A Sbjct: 5 KIQAKANDTAEISIYDEIGFWGVTAQQFAKDLKALGNN--LKQINLHIHSPGGDVFDGIA 62 Query: 86 IFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSL 128 I+ ++ K + +AAS +I+ A N I+ E ++ Sbjct: 63 IYNLLKNHPANK--TVYIDGLAASMASVIAMAGNEIIMPENAM 103 >gi|298674533|ref|YP_003726283.1| hypothetical protein Metev_0576 [Methanohalobium evestigatum Z-7303] gi|298287521|gb|ADI73487.1| protein of unknown function DUF114 [Methanohalobium evestigatum Z-7303] Length = 276 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 77/186 (41%), Gaps = 22/186 (11%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 IED++ ++ I + + + +PGG + I RA++ V+ + Sbjct: 76 IEDAESILRGIRNTANNRPIDIIA---HTPGGQVHPSIQIARALKNHNGHTRVM--IPHY 130 Query: 107 AASAGYLISCASNIIVAAETSLVGSI----GVLFQYPYVKPFLDKLGVSIKSVKSSPMKA 162 + S G +I+ A++ I+ + +++G I G L + Y P ++ S K + Sbjct: 131 SMSGGTIIALAADEIIMDDDAVIGPIDPQLGDLIRGTYPAPSW----INAVSQKGANAAD 186 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-----TGAE 217 S+++ K +++M+ V + + E RN L G + + +E Sbjct: 187 TTIVLSDISEKTMKLMRKVANELLEGKIED-EEKRNY---VVEKLVSGEMVHITPISASE 242 Query: 218 AKKVGL 223 A +GL Sbjct: 243 AADIGL 248 >gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus cytotoxicus NVH 391-98] Length = 193 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 49/199 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMAIYDTMQFIKPN- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ A S V + Sbjct: 88 -VSTICIGMAASMGAFLLAAGEKGKRFALPNSEV------MIH----------------- 123 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL-----VSESRNIPYDKTLVLSDG 210 + Q + + + F+R ++E P + +D Sbjct: 124 ------------QPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQPLEVIERDTD- 170 Query: 211 R--IWTGAEAKKVGLIDVV 227 R T +A + GLID + Sbjct: 171 RDNFMTAEKALEYGLIDRI 189 >gi|228943547|ref|ZP_04105982.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973794|ref|ZP_04134371.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980349|ref|ZP_04140660.1| Translocation-enhancing protein tepA [Bacillus thuringiensis Bt407] gi|228779454|gb|EEM27710.1| Translocation-enhancing protein tepA [Bacillus thuringiensis Bt407] gi|228785946|gb|EEM33948.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816134|gb|EEM62324.1| Translocation-enhancing protein tepA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941508|gb|AEA17404.1| translocation-enhancing protein tepA [Bacillus thuringiensis serovar chinensis CT-43] Length = 249 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGNAIRKLNEL 234 >gi|163868071|ref|YP_001609275.1| ATP-dependent Clp protease proteolytic subunit [Bartonella tribocorum CIP 105476] gi|189082448|sp|A9ISA4|CLPP_BART1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|161017722|emb|CAK01280.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella tribocorum CIP 105476] Length = 210 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFINGPVEDGMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRP-- 94 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS L++ + A + + + Sbjct: 95 PVSTLCMGQAASMGSLLLTAGAKGHRFALPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL---VSESRNIPYDKTLVLSDGRI 212 S + + S E + + + M+ ++ Y V E R + D Sbjct: 133 PSGGFQGQASDI-ERHAQDIIKMKRRLNEIYVQHTGQGYEVIE-RTLDRD--------HF 182 Query: 213 WTGAEAKKVGLIDVV 227 T EAK GL+D V Sbjct: 183 MTAEEAKAFGLVDDV 197 >gi|116073334|ref|ZP_01470596.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. RS9916] gi|116068639|gb|EAU74391.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. RS9916] Length = 200 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS+ + + ++SPGGS AG AI+ +Q VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTMQYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L+ + +A S + + + + I+ Sbjct: 102 MGAFLLGAGTKGKRLALPHSR------IMIHQPLGGTAQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 +A +++ R +++ ++K +D + + +AK GLID Sbjct: 143 -----EAREIL-----RIKEMLNRSMADMTGQSFEKIEKDTDRDYFLSAEDAKNYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|222085564|ref|YP_002544094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium radiobacter K84] gi|221723012|gb|ACM26168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium radiobacter K84] Length = 210 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 37/205 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + + ++ + ++ + + ++SPGG AG AI+ +Q +K Sbjct: 37 IIFLTGPVEDHMATLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T AAS G L+ A + A S + + Sbjct: 96 -ISTLCIGQAASMGSLLLAAGDKDMRFATPNSR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + Y++ D + + Sbjct: 133 PSGGFQGQASDI-ERHARDIIKMKRRLNEIY-------VKHCGRTYEEVEQTLDRDHFMS 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA 239 EAK GLID V + A Sbjct: 185 SDEAKDWGLIDKVLTSRTEMEGEAA 209 >gi|294501768|ref|YP_003565468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus megaterium QM B1551] gi|295707118|ref|YP_003600193.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus megaterium DSM 319] gi|294351705|gb|ADE72034.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus megaterium QM B1551] gi|294804777|gb|ADF41843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus megaterium DSM 319] Length = 195 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 50/200 (25%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G I+D + ++ ++ ++ +D + + ++SPGGS AG AI+ +Q +K + Sbjct: 28 RIIILGSAIDDNVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPK 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS +L++ A S V + Sbjct: 88 --VSTICIGMAASMGAFLLAAGEKGKRFALPNSEV------MIH---------------- 123 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSD 209 + Q + + + F+R +++E P + +D Sbjct: 124 -------------QPLGGAQGQATEIEIAAKRILFLREKLNSILAERTGQPLEVLQRDTD 170 Query: 210 GR--IWTGAEAKKVGLIDVV 227 R T A + GLID V Sbjct: 171 -RDNFMTAERALEYGLIDKV 189 >gi|297197433|ref|ZP_06914830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces sviceus ATCC 29083] gi|197716281|gb|EDY60315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces sviceus ATCC 29083] Length = 220 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 52/201 (25%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G D + + ++ +S +D T + + ++SPGGS YAG AI+ ++ + N Sbjct: 41 RIVLLGTQVDEVSANRVCSQLLVLSAEDPRTDISLYINSPGGSVYAGLAIYDTMRLIPND 100 Query: 97 KPVITEVHEMAASAGYLISCASN--IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGV 150 V T AAS G + C A + + GS G+ + Sbjct: 101 --VSTLAMGFAASMGQFLLCGGTPGKRYALPNARIMMHQGSAGIGGTTADI--------- 149 Query: 151 SIKSVKSSPMKAEPSPFSEVNPKAVQMMQDV-VDSSYHWFVRLVSESRNIPYDKTLVLSD 209 ++Q +D S RL++E+ + D Sbjct: 150 --------------------------LIQAENLDHSKQTMERLLAENTGQTPETIAR--D 181 Query: 210 G---RIWTGAEAKKVGLIDVV 227 G R +T EA++ G++D V Sbjct: 182 GDRDRWFTAEEAREYGMVDRV 202 >gi|225166209|ref|ZP_03727920.1| protein of unknown function DUF107 [Opitutaceae bacterium TAV2] gi|224799549|gb|EEG18067.1| protein of unknown function DUF107 [Opitutaceae bacterium TAV2] Length = 515 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 74/155 (47%), Gaps = 13/155 (8%) Query: 32 EDNSPHVARIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRA 89 D HV I +R QI L ++ + +A A+++ + +PGG I A Sbjct: 66 ADTPAHVFVIQVRDQITPPVLYVLRRGLKEAIK-QNAAAVVLDMKTPGGRVDVTLDIMEA 124 Query: 90 IQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVL-FQYPYVKPFLDKL 148 + + +T V++ A SAG LI+ ++ I + +++G+ V+ V + + Sbjct: 125 LDQFPGE--TLTYVNDEAMSAGALIAGVTDHIYFSPRAVIGAAEVVNSDGKDVGESMKR- 181 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVD 183 ++S ++ ++A +SE +P+ ++++ +++ Sbjct: 182 --KVESYLTAKIRA----YSETDPRRGEVLEAMMN 210 >gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|67460514|sp|Q7UZK7|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3; AltName: Full=Endopeptidase Clp 3 gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 215 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 48/199 (24%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I D S L+ ++ + +D + + ++SPGGS AG AI+ +Q++ Sbjct: 49 RIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPGGSVTAGLAIYDTMQQISPD 108 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T +AAS +L+S + +A S + + Sbjct: 109 --VVTICFGVAASMGAFLLSGGAKGKRLALPNSR------IMIH---------------- 144 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR-----LVSESRNIPYDKTLVLSD 209 + Q ++ + + F++ L+++ N +K ++ Sbjct: 145 -------------QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTE 191 Query: 210 GRIW-TGAEAKKVGLIDVV 227 + + EA + GLID V Sbjct: 192 RDYFLSPEEAVEYGLIDKV 210 >gi|239623656|ref|ZP_04666687.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47_FAA] gi|239521687|gb|EEQ61553.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47FAA] Length = 193 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 69/178 (38%), Gaps = 35/178 (19%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D + + ++SPGGS AG AI+ + +K V T MAAS Sbjct: 44 VVAQLLFLESEDPGKDIHLYINSPGGSVSAGFAIYDTMNYIKCD--VSTICIGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L++ + A S + + S K + + Sbjct: 102 FLLAGGAKGKRFALPNSE------IMIHQ----------------PSGGAKGQAT----- 134 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 ++++ + + + +++ + P + ++ + + EAK+ GLID + Sbjct: 135 ---EIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAEEAKEYGLIDEI 189 >gi|295838900|ref|ZP_06825833.1| Clp protease [Streptomyces sp. SPB74] gi|302519066|ref|ZP_07271408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces sp. SPB78] gi|197695452|gb|EDY42385.1| Clp protease [Streptomyces sp. SPB74] gi|302427961|gb|EFK99776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces sp. SPB78] Length = 215 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 48/187 (25%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ ++ D S + + ++SPGGS AG AI+ +Q + N VIT MAAS Sbjct: 53 ANKITAQMLLLAADPS-KDIYLYINSPGGSVTAGMAIYDTMQYIPND--VITIGMGMAAS 109 Query: 110 AGYLISCASN--IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G + A + + GS G+ Sbjct: 110 MGQFLLTGGTPGKRFALPNTDILMHQGSAGIGG--------------------------- 142 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTGAEAKK 220 +++ + + + + + + +K + DG R +T EAK Sbjct: 143 -------TASDIKIQAEYLLRTKNRMAEITARHSGQTIEKI--IRDGDRDRWFTAEEAKD 193 Query: 221 VGLIDVV 227 GLID + Sbjct: 194 YGLIDEI 200 >gi|116784526|gb|ABK23378.1| unknown [Picea sitchensis] Length = 341 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 50/215 (23%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + +I ++ + +DS + + ++SPGGS AG I+ A++ K V T +AA Sbjct: 120 SADFIISQLLLLDLEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKAD--VSTVCFGLAA 177 Query: 109 S-AGYLISCASN-IIVAAETSLV-------GSIGVLFQYPYVKPFLDKLGVSIKSVKSSP 159 S +L++ + + V G G + L + + + Sbjct: 178 SMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSAIEMALQAKELMYHKIKLTKI---- 233 Query: 160 MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAK 219 S + K+ + + D Y F+ W EA Sbjct: 234 -------MSRLTDKSEEQIAKDTDRDY--FLNP--------------------W---EAV 261 Query: 220 KVGLIDVVGGQEEVWQSLYA-LGVDQSIRKIKDWN 253 + GL D V ++ L A +G + KI+ W+ Sbjct: 262 EYGLADAV--IDDGKPGLVAPIGDTKPPSKIEMWH 294 >gi|315162197|gb|EFU06214.1| Clp protease [Enterococcus faecalis TX0645] Length = 257 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 57/268 (21%) Query: 38 VARIAIRGQIEDSQEL---------------IERIERISRDDSATALIVSLSSPGGSAYA 82 +I + G I S + + + + ++ V+++S GG Sbjct: 4 TVKIKVNGPIISSDDKWFYDWFEMEATSPKDVLDLLPANHNEDVE---VTINSNGGLVDM 60 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVK 142 G I+ A++ + V + AAS +I+ A N + + +G + + Sbjct: 61 GNEIYTALRSYEGHVKVSIVMAGSAAS---IIAMAGNTVAISP------VGQIMIHN--- 108 Query: 143 PFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYD 202 V + + +Q + ++Y VS++ + Sbjct: 109 ------------VAMGAGGDYHTMDKA--SEILQKANKSLANAY------VSKT-GKAKE 147 Query: 203 KTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE-----VWQSLYALGVDQSIRKIKDWNPPK 256 + L L D W T EA + G D + + V L + I ++K + Sbjct: 148 EILALMDKETWLTAEEAVENGFADEIMFENTERPLLVADGGSGLISKEIINEVKKLKNQQ 207 Query: 257 NYWFCDLKNLSISSLLEDTIPLMKQTKV 284 N + + ++ + I +KQ ++ Sbjct: 208 NEPVVMVNKKELKEMIAEAIVEVKQNEI 235 >gi|300870761|ref|YP_003785632.1| membrane bound serine protease ClpP class [Brachyspira pilosicoli 95/1000] gi|300688460|gb|ADK31131.1| membrane bound serine protease ClpP class [Brachyspira pilosicoli 95/1000] Length = 440 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 3/81 (3%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 S + +E ++D A+ +I+ + +PGG + I A+ +++ PV+ +++ A S Sbjct: 40 SSYIKNGLEEAKKND-ASLIILEIDTPGGLLSSALEIKNAL--IESDIPVVAYINKNALS 96 Query: 110 AGYLISCASNIIVAAETSLVG 130 AG LIS + + I ++ S++G Sbjct: 97 AGALISLSCSDIYMSDGSIIG 117 >gi|25028868|ref|NP_738922.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium efficiens YS-314] gi|259507930|ref|ZP_05750830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium efficiens YS-314] gi|67460556|sp|Q8FN36|CLPP2_COREF RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|23494155|dbj|BAC19122.1| putative endopeptidase Clp chain P1 [Corynebacterium efficiens YS-314] gi|259164425|gb|EEW48979.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Corynebacterium efficiens YS-314] Length = 199 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 35/186 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +L +I +S +D + + ++SPGGS AG AI+ ++ + T +AAS Sbjct: 41 ANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKYSPCD--IATYGMGLAAS 98 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G + A + + + +PS Sbjct: 99 MGQFLLSGGTPGKRYALPHAR------IMMH------------------------QPSAG 128 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 + + + + +L++E +++ SD R +T +AK+ GL+D Sbjct: 129 VGGTAADIAIQAEQFAQTKREMAKLIAEHTGQTFEQVTKDSDRDRWFTAEQAKEYGLVDH 188 Query: 227 VGGQEE 232 V E Sbjct: 189 VITLAE 194 >gi|213966160|ref|ZP_03394346.1| Clp protease [Corynebacterium amycolatum SK46] gi|213951175|gb|EEB62571.1| Clp protease [Corynebacterium amycolatum SK46] Length = 190 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 36/176 (20%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AGYL 113 + + + D + + + ++SPGGS AG AI+ +Q V V T +AAS +L Sbjct: 39 QMLLLAAEDPESD-ISLYINSPGGSVTAGMAIYDTMQFVPCD--VATYGMGLAASMGQFL 95 Query: 114 ISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNP 172 ++ + A + + + P S++ Sbjct: 96 LAAGAKGKRYALPHAR------IMMHQ-------------------PSAGIGGTASDITI 130 Query: 173 KAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVV 227 +A Q ++ RL+++ P ++ SD R +T AEAK+ GL+D V Sbjct: 131 QAEQF-----AATKKEMARLIAQHTGQPVERIEEDSDRDRWFTAAEAKEYGLVDHV 181 >gi|238759262|ref|ZP_04620429.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae ATCC 35236] gi|238702549|gb|EEP95099.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae ATCC 35236] Length = 194 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + + ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 29 IIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 88 -VSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGFQGQATDIEIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 K + K M +++ + ++ ++ R Sbjct: 141 KEIL----------------KVKSRMNELM-----------AHHTGKSLEEIERDTERDR 173 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V + + Sbjct: 174 FLSAQQAVEYGLVDSVFTRRD 194 >gi|319652198|ref|ZP_08006317.1| ATP-dependent Clp protease [Bacillus sp. 2_A_57_CT2] gi|317396187|gb|EFV76906.1| ATP-dependent Clp protease [Bacillus sp. 2_A_57_CT2] Length = 193 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I +I D + +I ++ ++ + + + ++SPGGS AG AIF IQ +K Sbjct: 29 IIMIGEEINDVVTNSVIAQLLFLAAESPEKDISLYINSPGGSTTAGFAIFDTIQYIKPD- 87 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS G ++ A + S + + + + + Sbjct: 88 -VRTICTGMAASFGAMLLLAGKKGKRYSLPNSE------IMIHQPLGGARGQA----TEI 136 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E++ K + +++ ++ +++E P +K +D + T Sbjct: 137 -------------EISAKRIIKLREHIN-------GIIAERTGQPIEKVARDTDRDYFMT 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ G+ID + Sbjct: 177 AEEAKEYGIIDEI 189 >gi|257078066|ref|ZP_05572427.1| phage protein [Enterococcus faecalis JH1] gi|256986096|gb|EEU73398.1| phage protein [Enterococcus faecalis JH1] Length = 253 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 89/266 (33%), Gaps = 57/266 (21%) Query: 40 RIAIRGQIEDSQEL---------------IERIERISRDDSATALIVSLSSPGGSAYAGE 84 +I + G I S + + + + ++ V+++S GG G Sbjct: 2 KIKVNGPIISSDDKWFYDWFEMEATSPKDVLDLLPANHNEDVE---VTINSNGGLVDMGN 58 Query: 85 AIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPF 144 I+ A++ + V + AAS +I+ A N + + +G + + Sbjct: 59 EIYTALRSYEGHVKVNIVMAGSAAS---IIAMAGNTVAISP------VGQIMIHN----- 104 Query: 145 LDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT 204 V + + +Q + ++Y VS++ ++ Sbjct: 105 ----------VAMGAGGDYHTMDKA--SEILQKANKSLANAY------VSKT-GKAKEEI 145 Query: 205 LVLSDGRIW-TGAEAKKVGLIDVVGGQEE-----VWQSLYALGVDQSIRKIKDWNPPKNY 258 L L D W T EA + G D + + V L + I ++K +N Sbjct: 146 LALMDKETWLTAEEAVENGFADEIMFENTERPLLVADGGSGLISKEIINEVKKLKNQQNE 205 Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKV 284 + + ++ + I +KQ ++ Sbjct: 206 PVVMVNKKELKEMIAEAIVEVKQNEI 231 >gi|185177785|pdb|2ZL3|A Chain A, Crystal Structure Of H.Pylori Clpp S99a gi|185177786|pdb|2ZL3|B Chain B, Crystal Structure Of H.Pylori Clpp S99a gi|185177787|pdb|2ZL3|C Chain C, Crystal Structure Of H.Pylori Clpp S99a gi|185177788|pdb|2ZL3|D Chain D, Crystal Structure Of H.Pylori Clpp S99a gi|185177789|pdb|2ZL3|E Chain E, Crystal Structure Of H.Pylori Clpp S99a gi|185177790|pdb|2ZL3|F Chain F, Crystal Structure Of H.Pylori Clpp S99a gi|185177791|pdb|2ZL3|G Chain G, Crystal Structure Of H.Pylori Clpp S99a gi|185177792|pdb|2ZL3|H Chain H, Crystal Structure Of H.Pylori Clpp S99a gi|185177793|pdb|2ZL3|I Chain I, Crystal Structure Of H.Pylori Clpp S99a gi|185177794|pdb|2ZL3|J Chain J, Crystal Structure Of H.Pylori Clpp S99a gi|185177795|pdb|2ZL3|K Chain K, Crystal Structure Of H.Pylori Clpp S99a gi|185177796|pdb|2ZL3|L Chain L, Crystal Structure Of H.Pylori Clpp S99a gi|185177797|pdb|2ZL3|M Chain M, Crystal Structure Of H.Pylori Clpp S99a gi|185177798|pdb|2ZL3|N Chain N, Crystal Structure Of H.Pylori Clpp S99a gi|185177799|pdb|2ZL4|A Chain A, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177801|pdb|2ZL4|B Chain B, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177803|pdb|2ZL4|C Chain C, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177805|pdb|2ZL4|D Chain D, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177807|pdb|2ZL4|E Chain E, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177809|pdb|2ZL4|F Chain F, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177811|pdb|2ZL4|G Chain G, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177813|pdb|2ZL4|H Chain H, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177815|pdb|2ZL4|I Chain I, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177817|pdb|2ZL4|J Chain J, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177819|pdb|2ZL4|K Chain K, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177821|pdb|2ZL4|L Chain L, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177823|pdb|2ZL4|M Chain M, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa gi|185177825|pdb|2ZL4|N Chain N, Crystal Structure Of H.Pylori Clpp S99a In Complex With The Peptide Aaaa Length = 196 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 30 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDV 89 Query: 98 PVITEVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 I + + AA +L+SC + + S + + + + Sbjct: 90 STI-CIGQAAAMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA-------- 134 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 ++++ + + +++++ ++ +D + + Sbjct: 135 ----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSA 178 Query: 216 AEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 179 KEAKEYGLIDKV 190 >gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 201 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 44/197 (22%) Query: 40 RIAIRG-QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + D + + ++SPGGS AG A++ +Q +K Sbjct: 35 RIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGSVTAGMAVYDTMQYIKPD 94 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V+T AAS L++ + A S + + ++ + + Sbjct: 95 --VVTICIGQAASMGAVLLAAGAKGKRYALPHSR------IMIHQPLGGIQGQATDIIIH 146 Query: 152 IKSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG 210 + +K +K + ++ + ++ ++ V+ Y Sbjct: 147 AEEIKR--IKRMLNEILAKHTGQDLEKIEKDVERDY------------------------ 180 Query: 211 RIWTGAEAKKVGLIDVV 227 + EAK G+ID V Sbjct: 181 -FMSAEEAKDYGVIDKV 196 >gi|73541074|ref|YP_295594.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha JMP134] gi|124013825|sp|Q472D3|CLPP_RALEJ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|72118487|gb|AAZ60750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ralstonia eutropha JMP134] Length = 216 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D ++ ++ + ++ + + ++SPGGS AG AI+ +Q VK Sbjct: 51 VVFLVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPD- 109 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S + + + + + Sbjct: 110 -VQTLCMGMAASMGAFLLAAGAKGKRSALPNSR------IMIHQPLGGARGQASDIEIQA 162 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V ++ R+ D Sbjct: 163 REILY----------------LRERLNSILSEVTGQPVEKIA--RDTDRDN--------F 196 Query: 213 WTGAEAKKVGLIDVV 227 +G +A GLID V Sbjct: 197 MSGDQAVDYGLIDKV 211 >gi|300173717|ref|YP_003772883.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc gasicomitatum LMG 18811] gi|299888096|emb|CBL92064.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc gasicomitatum LMG 18811] Length = 200 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I ++G++EDS ++ ++ + D + + ++SPGGS AG +I + +K Sbjct: 27 IILVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIKA-- 84 Query: 98 PVITEVHEMAASAGYLISCASNI 120 PV T V +AAS G +I+ + Sbjct: 85 PVTTIVMGLAASMGTIIASSGEK 107 >gi|18203597|sp|Q9X5N0|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus] Length = 206 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 82/217 (37%), Gaps = 53/217 (24%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + +I+D + ++ ++ + +D + + ++SPGGS AG AI+ +Q VK Sbjct: 31 IVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKC-- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV------GSIGVLFQYPYVKPFLDKLG 149 PV T AAS L+ + A +S + G GV Q + Sbjct: 89 PVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLG--GVRGQATDI-------- 138 Query: 150 VSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD 209 E+ K + M+ ++ L+ + ++ +D Sbjct: 139 -------------------EIQAKEILRMKAKLNE-------LIVKHTGQSIERVEKDTD 172 Query: 210 GRIWTGA-EAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 + GA EAK G+ID + +V LG ++ Sbjct: 173 RDYFMGASEAKAYGIIDEIQNPRKVV----GLGKEEK 205 >gi|320332658|ref|YP_004169369.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus maricopensis DSM 21211] gi|319753947|gb|ADV65704.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus maricopensis DSM 21211] Length = 201 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 36/193 (18%) Query: 40 RIAIRGQIEDSQ---ELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G DSQ ++ ++ + + + + ++SPGG YAG AI+ ++ +K Sbjct: 28 RIIFLGTPIDSQVANTIVAQLLLLDSQNPEREIQLYINSPGGEVYAGLAIYDTMRYIKA- 86 Query: 97 KPVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 PV T +A S G +I A + A S + + F Sbjct: 87 -PVSTICVGIAMSMGSVILMAGDKGKRSALPNSR------IMIHQGSSGFRGN------- 132 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 +P EV K ++D + YH L E ++ +S G Sbjct: 133 ----------TPDVEVQAKETLYLRDRLVDIYHRHTSLPHEKLLRDMERDYFMSPGE--- 179 Query: 215 GAEAKKVGLIDVV 227 A++ GLID V Sbjct: 180 ---AQQYGLIDAV 189 >gi|318076382|ref|ZP_07983714.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces sp. SA3_actF] gi|333027107|ref|ZP_08455171.1| putative Clp protease [Streptomyces sp. Tu6071] gi|332746959|gb|EGJ77400.1| putative Clp protease [Streptomyces sp. Tu6071] Length = 205 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 48/187 (25%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ ++ D S + + ++SPGGS AG AI+ +Q + N VIT MAAS Sbjct: 43 ANKITAQMLLLAADPS-KDIYLYINSPGGSVTAGMAIYDTMQYIPND--VITIGMGMAAS 99 Query: 110 AGYLISCASN--IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G + A + + GS G+ Sbjct: 100 MGQFLLTGGTPGKRFALPNTDILMHQGSAGIGG--------------------------- 132 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTGAEAKK 220 +++ + + + + + + +K + DG R +T EAK Sbjct: 133 -------TASDIKIQAEYLLRTKNRMAEITARHSGQTIEKI--IRDGDRDRWFTAEEAKD 183 Query: 221 VGLIDVV 227 GLID + Sbjct: 184 YGLIDEI 190 >gi|255658239|ref|ZP_05403648.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella multacida DSM 20544] gi|260849549|gb|EEX69556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella multacida DSM 20544] Length = 199 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D+ ++ ++ + +D + + ++SPGG AG AI+ +Q +K Sbjct: 24 IIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPGGVVTAGLAIYDTMQYIKPD- 82 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS L++ + A + + + + + Sbjct: 83 -VSTICIGQAASMGALLLTAGAKGKRYALPNAR------IMIHQPLGGAQGQ-------- 127 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 S ++ + +Q +++V++ LV + T Sbjct: 128 ---------STDIQIQAREIQRIREVINDI------LVESTGKDRETVVQDTERDNFMTA 172 Query: 216 AEAKKVGLIDVV 227 EAK GL+D V Sbjct: 173 EEAKAYGLVDEV 184 >gi|332305574|ref|YP_004433425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172903|gb|AEE22157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola agarilytica 4H-3-7+YE-5] Length = 212 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 70/192 (36%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGGS AG AI+ + +K Sbjct: 38 VIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPD- 96 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+S + + V + + F + S + Sbjct: 97 -VSTVCIGQAASMGAFLLSGGTKGKRYCLPNARV------MIHQPLGGFQGQA--SDFEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + K S + M ++ V+ R+ D + Sbjct: 148 HA---KEILSI--------KEKMNRLMAEHTGQDYEKVA--RDTDRDN--------FLSA 186 Query: 216 AEAKKVGLIDVV 227 E+ GL+D V Sbjct: 187 QESVDYGLVDQV 198 >gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurihydrogenibium yellowstonense SS-5] gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurihydrogenibium yellowstonense SS-5] Length = 201 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 77/194 (39%), Gaps = 38/194 (19%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + +D + + ++SPGG AG AI+ + +K Sbjct: 33 RIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGVVTAGLAIYDTMNYIKPD 92 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V+T AAS +L+S + + + + + + F Sbjct: 93 --VVTICMGQAASMGAFLLSAGAKGKRYSLPNAR------IMIHQPLGGFQ--------- 135 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 E++ K + ++ +++ +++ P +K ++ + Sbjct: 136 ---GQATDI-----EIHAKEILRLKRMLNEY-------LAKHTGQPIEKIEADTERDYFM 180 Query: 214 TGAEAKKVGLIDVV 227 + EAK+ GLID V Sbjct: 181 SAEEAKEYGLIDKV 194 >gi|125974224|ref|YP_001038134.1| peptidase S14, ClpP [Clostridium thermocellum ATCC 27405] gi|125714449|gb|ABN52941.1| peptidase S14, ClpP [Clostridium thermocellum ATCC 27405] Length = 247 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 19/103 (18%) Query: 41 IAIRGQIEDSQELIERIERISRDDSA--------------TALIVSLSSPGGSAYAGEAI 86 + I G I + + +D+ + V ++S GG YA I Sbjct: 18 LRIDGDIVMDDDFWSML---FGNDNVTPKGFMSELNKYKGKDINVWINSYGGDVYAASRI 74 Query: 87 FRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLV 129 + +++ K + V ++ +A SA +I+ A + I+ + TS++ Sbjct: 75 YTGLKEHKGK--VKVKIDGVAISAASVIAMAGDEILMSPTSII 115 >gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp [Calditerrivibrio nitroreducens DSM 19672] gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calditerrivibrio nitroreducens DSM 19672] Length = 195 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + +D + + ++SPGG +G AIF + +K Sbjct: 30 IIFLGTAIDDTVANSIVAQMLFLEAEDPKKDIYLYINSPGGVITSGLAIFDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS L++C + A + + + + F Sbjct: 89 -VSTICIGQAASMGAVLLACGAKGKRFALPNTR------IMIHQPLGGFQ---------- 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 K E+ K + ++ ++ ++E + P ++ D + + Sbjct: 132 --GQAKDI-----EIQAKEILRLKSKINEI-------LAERTSKPIEQIDADCDRDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 EAK GLID V Sbjct: 178 AEEAKAYGLIDEV 190 >gi|313114424|ref|ZP_07799950.1| Clp protease [Faecalibacterium cf. prausnitzii KLE1255] gi|310623251|gb|EFQ06680.1| Clp protease [Faecalibacterium cf. prausnitzii KLE1255] Length = 236 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 64/198 (32%), Gaps = 43/198 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ D L+V L++ GG AG A+ I V KP T V S Sbjct: 68 EHVIPQLVAAQEDPRIEGLLVLLNTVGGDVEAGLALAELIASVS--KPSATLVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ ++ T+ + +P + LGV Sbjct: 126 GIPLAVSARRSFIVPTA------TMTVHPVRHSGV-ILGV------------------PQ 160 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--DGR-------IWTGAEAKKV 221 ++ + MQ + V+ + + L G + G A K Sbjct: 161 TMRSFEQMQQRI-------TGFVAAHSGMTEKRYTDLMLHTGELVMDMGTVLDGRRAVKE 213 Query: 222 GLIDVVGGQEEVWQSLYA 239 LID +GG + LY Sbjct: 214 KLIDELGGLSDALAWLYK 231 >gi|296136117|ref|YP_003643359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas intermedia K12] gi|295796239|gb|ADG31029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas intermedia K12] Length = 202 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 78/193 (40%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I D + ++ ++ + ++ + + ++SPGGS AG AIF +Q +K Sbjct: 37 VIFLVGPINDQMANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIFDTMQFIKPD- 95 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L++ + + S + + Sbjct: 96 -VSTLCTGIAASMGAFLMAAGAKGKRYSLPNSR------IMIHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + + E+ + + +++ ++ +++E +K + ++ + + Sbjct: 133 PSGGAQGQATDI-EIQAREILYLRERLN-------GILAERTGQTLEKIGIDTERDFFMS 184 Query: 215 GAEAKKVGLIDVV 227 EAK GLID V Sbjct: 185 AEEAKDYGLIDEV 197 >gi|228899164|ref|ZP_04063435.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis IBL 4222] gi|228860497|gb|EEN04886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis IBL 4222] Length = 197 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 31/149 (20%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++S GGS +AG AI+ +++ K +K V +AAS +I+ A + +V + Sbjct: 20 IYVNSGGGSVFAGLAIYNMLKRNKAQK--TVYVDGVAASIASVIALAGDRVVVPSNAF-- 75 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 L + +V + ++ + + ++ + + Y + Sbjct: 76 ----LMVH------------KPWTVSRGN----ANVLRKM-AEDLDNLEAGIMNVYKENL 114 Query: 191 RLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 + I + L D W +G EA Sbjct: 115 KE-----GIEMEVIQQLVDAETWLSGEEA 138 >gi|254453571|ref|ZP_05067008.1| Clp protease [Octadecabacter antarcticus 238] gi|198267977|gb|EDY92247.1| Clp protease [Octadecabacter antarcticus 238] Length = 195 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I ++ ++ + ++ + + ++SPGG AG +I+ +Q +K + Sbjct: 24 IIFVNGPIHSGMSHLIVAQLLHLEAENPKKEISMYINSPGGEVTAGLSIYDTMQYIKPK- 82 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLV 129 V T + MAAS G +I+ A + V Sbjct: 83 -VSTLICGMAASMGSVIAIGGEKGMRFALPNAEV 115 >gi|3599968|gb|AAC35489.1| clp protease [Arabidopsis thaliana] Length = 310 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 91/245 (37%), Gaps = 43/245 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + +DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 106 MTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGLA 163 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ Sbjct: 164 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGTAGGK 199 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GLID Sbjct: 200 ATEMSIRIREMMYHKIK-LNKIFSRI----TGKPESEIESDTDRDNFLNPWEAKEYGLID 254 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G I I D PP DL + + +P + Sbjct: 255 AV--IDD--------GKPGLIAPIGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQN 304 Query: 286 GLWAV 290 G A+ Sbjct: 305 GYAAI 309 >gi|18408572|ref|NP_564880.1| CLPP3; serine-type endopeptidase [Arabidopsis thaliana] gi|75314059|sp|Q9SXJ6|CLPP3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; AltName: Full=Endopeptidase ClpP3; Short=nClpP3; AltName: Full=nClpP4; Flags: Precursor gi|12322291|gb|AAG51173.1|AC079285_6 ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana] gi|12597762|gb|AAG60075.1|AC013288_9 ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana] gi|5360591|dbj|BAA82067.1| nClpP3 [Arabidopsis thaliana] gi|21592949|gb|AAM64899.1| ATP-dependent Clp protease proteolytic subunit ClpP3 [Arabidopsis thaliana] gi|332196422|gb|AEE34543.1| ATP-dependent Clp protease proteolytic subunit 3 [Arabidopsis thaliana] Length = 309 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 91/245 (37%), Gaps = 43/245 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + +DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 105 MTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGLA 162 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ Sbjct: 163 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGTAGGK 198 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GLID Sbjct: 199 ATEMSIRIREMMYHKIK-LNKIFSRI----TGKPESEIESDTDRDNFLNPWEAKEYGLID 253 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G I I D PP DL + + +P + Sbjct: 254 AV--IDD--------GKPGLIAPIGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQN 303 Query: 286 GLWAV 290 G A+ Sbjct: 304 GYAAI 308 >gi|325474230|gb|EGC77418.1| ATP-dependent Clp protease proteolytic subunit 1 [Treponema denticola F0402] Length = 197 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 25/175 (14%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + + + + ++SPGGS AG AI+ +Q ++ Sbjct: 30 IIFVDGEINDMSADLVVAQLLFLEAQNPDKDISLYINSPGGSVTAGLAIYDTMQHIRPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLV------GSIGVLFQYPYVK------P 143 V T AS L++ + N A +S V G GV Q + Sbjct: 89 -VQTICLGQCASMGAVLLAGGAKNKRYALPSSRVMIHQPWG--GVQGQAVDINIQAKEIV 145 Query: 144 FLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198 L KL + + + + ++ + + V R Sbjct: 146 RLKKLTIKYFAENTGK-----TEKQVAADMERDFFMSAEEALAYGIIDTVMNRRK 195 >gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia pyrifoliae DSM 12163] Length = 218 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 53 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPD- 111 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS- 151 V T A S +L++ + S V + + + + Sbjct: 112 -VSTICMGQACSMGAFLLTAGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIDIHA 164 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K+ QMM +++ + + N R Sbjct: 165 REIIKT-----------------KQMMNELMAKHTGQTIETIERDTNRD----------R 197 Query: 212 IWTGAEAKKVGLIDVV 227 + +E+ + GL+D V Sbjct: 198 FLSASESVEYGLVDSV 213 >gi|121997404|ref|YP_001002191.1| ATP-dependent Clp protease proteolytic subunit [Halorhodospira halophila SL1] gi|226706517|sp|A1WUM7|CLPP_HALHL RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|121588809|gb|ABM61389.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halorhodospira halophila SL1] Length = 210 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 43/202 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED Q L+ ++ + ++ + + ++SPGGS AG AI+ +Q + K Sbjct: 42 VIFLVGPVEDYQANLLVAQLLFLESENPDKDVHLYINSPGGSVTAGLAIYDTMQFI---K 98 Query: 98 PVIT--EVHEMAASAGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 P + V + A+ L++ + A S + + + + + Sbjct: 99 PDVATLCVGQAASMGALLLAAGAEGKRHALPNSR------MMIHQPLGGFQGQATDIDIH 152 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + S + ++ + + + D+ ++ Sbjct: 153 AREILS----------------MRDRLNTILAHHTGQDIETIRQ----DTDRDNFMA--- 189 Query: 212 IWTGAEAKKVGLIDVVGGQEEV 233 A + GLID V Sbjct: 190 ---AEAAAQYGLIDRVLTSRGA 208 >gi|303328063|ref|ZP_07358502.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio sp. 3_1_syn3] gi|302861889|gb|EFL84824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio sp. 3_1_syn3] Length = 202 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 35/178 (19%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 + ++ + D + + ++SPGGS AG AI+ ++ + + PV T AAS Sbjct: 44 ICAQLLFLESQDPEKEINLYINSPGGSVTAGLAIYDTMRYITS--PVTTVCMGRAASMGA 101 Query: 112 YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVN 171 +L++ G G+ F P + + + S + + + E++ Sbjct: 102 FLLAA-------------GEPGMRFALPNSQIMIHQP--------SGGFQGQATDI-EIH 139 Query: 172 PKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTGAEAKKVGLIDVV 227 + V +++ ++ ++E+ PY+ + + R T EAK++G+ID V Sbjct: 140 AREVLRLKERLNRM-------LAENTKRPYEDVVK-ATERDNFLTPEEAKELGIIDRV 189 >gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter bemidjiensis Bem] gi|226706452|sp|B5EI27|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter bemidjiensis Bem] Length = 199 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I+D + +I ++ + +D + + ++SPGG AG AI+ ++ +K Sbjct: 28 IIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIYDTMRYIKA-- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T AAS G + SLV S I + + + + Sbjct: 86 PVSTICVGQAASMGAFLLSGGEK--GKRYSLVNSRIMIHQPLGGFQGQATDIHIH----- 138 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 K + M+D +++ L++E +K ++ + +G Sbjct: 139 ---------------AKEILRMKDQLNA-------LLAEHTGQSVEKVAADTERDYFMSG 176 Query: 216 AEAKKVGLIDVV 227 EAK G+ID + Sbjct: 177 EEAKNYGIIDAI 188 >gi|77919287|ref|YP_357102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter carbinolicus DSM 2380] gi|90183182|sp|Q3A3X5|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter carbinolicus DSM 2380] Length = 194 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ++D + +I ++ + +D + + ++SPGG AG AI+ +Q V+ Sbjct: 29 IIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPGGVVTAGMAIYDTMQYVRC-- 86 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T AAS L++ A + I + + + + + Sbjct: 87 PVSTLCVGQAASMGAVLLAAGGEGKRFALPHAR---IMIHQPWGGFQGQATDINIH---- 139 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 + + +++ ++ +++ +K ++ + G Sbjct: 140 ----------------AQEILRLRETLN-------GVLASHTGQTLEKIATDTERDFFMG 176 Query: 216 -AEAKKVGLIDVV 227 EAKK G++D + Sbjct: 177 SEEAKKYGIVDDI 189 >gi|152967460|ref|YP_001363244.1| endopeptidase Clp [Kineococcus radiotolerans SRS30216] gi|151361977|gb|ABS04980.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216] Length = 213 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 38/178 (21%) Query: 54 IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH-EMAASAGY 112 + + + D A + + ++SPGGS AG +I+ +Q + KP + + MAAS G Sbjct: 55 AQLLLLAAEDPDAD-IFMYINSPGGSVSAGMSIYDTMQYI---KPDVATIATGMAASMGQ 110 Query: 113 LISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV-- 170 + CA G+ G P+ K + + P + Sbjct: 111 FLLCA------------GAAGKRSALPHAKIMMHQ------------------PLGGLGG 140 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDVV 227 + ++++ + + ++ L+++ ++ SD R ++ EAK+ GLID V Sbjct: 141 SASDIKILAEQIIATKKQMAELIAQHSGQTFETITRDSDRDRWFSAQEAKEYGLIDHV 198 >gi|224532269|ref|ZP_03672901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia valaisiana VS116] gi|224511734|gb|EEF82140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia valaisiana VS116] Length = 197 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + +I ++ + +DS+ + + L+SPGGS AG AI+ +Q +K Sbjct: 33 IIFLSGEINDPKADTVIAQLLFLESEDSSKDIYLYLNSPGGSITAGLAIYDTMQYIKPD- 91 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L++ + SL S I + + + + + + Sbjct: 92 -VRTICIGQAASMGAFLLASGAK---GKRESLTYSRIMIHQPWGGISGQASDINIQANEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 ++ ++ + + E + ++ T Sbjct: 148 L--------------------RLKKLIIDIMSNQIGIDKEKLALDMERDY------FMTS 181 Query: 216 AEAKKVGLIDVV 227 +A K GLID + Sbjct: 182 NDALKYGLIDSI 193 >gi|170016746|ref|YP_001727665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leuconostoc citreum KM20] gi|259585959|sp|B1MXG9|CLPP_LEUCK RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|169803603|gb|ACA82221.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leuconostoc citreum KM20] Length = 200 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 4/83 (4%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + ++G++EDS ++ ++ + D + + ++SPGGS AG +I + +K Sbjct: 27 IVLVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYINSPGGSVTAGLSITDTMNFIKA-- 84 Query: 98 PVITEVHEMAASAGYLISCASNI 120 PV T V +AAS G +I+ + Sbjct: 85 PVTTIVMGLAASMGTIIASSGEK 107 >gi|154509334|ref|ZP_02044976.1| hypothetical protein ACTODO_01859 [Actinomyces odontolyticus ATCC 17982] gi|153798968|gb|EDN81388.1| hypothetical protein ACTODO_01859 [Actinomyces odontolyticus ATCC 17982] Length = 216 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + + ++ ++ +D + + ++SPGGS AG AI+ +Q + K Sbjct: 43 IIWLGGEVRDENANVICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAIYDTMQYI---K 99 Query: 98 PVITEVH-EMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P + V MAAS G + + A + V + L G S Sbjct: 100 PDVVTVGMGMAASMGQFLLTAGAPGKRYITPHTRV----------LLHQPLGGAGGSATE 149 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 ++ + D++ + + ++ D W Sbjct: 150 IRINA--------------------DLILGMKKELAAITASRTGKTVEQVEADGDRDHWF 189 Query: 214 TGAEAKKVGLIDVV 227 T EA + G +D V Sbjct: 190 TAQEALEYGFVDRV 203 >gi|148240100|ref|YP_001225487.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp. WH 7803] gi|147848639|emb|CAK24190.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp. WH 7803] Length = 200 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 75/181 (41%), Gaps = 34/181 (18%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + L+ ++ + +DS + + ++SPGGS AG AI+ ++ VK+ V+T +AAS Sbjct: 44 ANSLVAQMLYLDSEDSGKPIYLYINSPGGSVTAGLAIYDTMKYVKSD--VVTICVGLAAS 101 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 +L++ + +A S + + + + I+ Sbjct: 102 MGAFLLAAGTQGKRLALPHSR------IMIHQPLGGTAQRQASDIEI------------- 142 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 + + M+++++ S +++ ++K +D + + EA GLID Sbjct: 143 ---EAQEILRMKEMLNRS-------MADMSGQSFEKIEKDTDRDYFLSSQEAMDYGLIDR 192 Query: 227 V 227 V Sbjct: 193 V 193 >gi|85058649|ref|YP_454351.1| ATP-dependent Clp protease proteolytic subunit [Sodalis glossinidius str. 'morsitans'] gi|84779169|dbj|BAE73946.1| ATP-dependent Clp protease proteolytic subunit [Sodalis glossinidius str. 'morsitans'] Length = 207 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 70/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFMTGQVEDHMANLIVAQMMFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + + Sbjct: 101 -VSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRV------MIHQPLGGFQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ P + ++ R Sbjct: 154 REIL----------------KVKARMNELM-----------AKHTGQPLEVIERDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + EA GL+D V Sbjct: 187 FLSAPEAVDYGLVDSV 202 >gi|294083692|ref|YP_003550449.1| protease subunit of ATP-dependent Clp protease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663264|gb|ADE38365.1| Protease subunit of ATP-dependent Clp protease [Candidatus Puniceispirillum marinum IMCC1322] Length = 216 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G ++D+ + ++ + ++ + + ++SPGG +G AI+ ++ ++ Sbjct: 43 IIFLNGPVDDTTASLVCSQLLFLESENPTKDISMYINSPGGIVTSGLAIYDTMEYIRPD- 101 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L++ A+ + + + + F Sbjct: 102 -VSTVCMGQAASMGSLLLMAGAAGKRYSLPNAR------IMTHQPSGGF----------- 143 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S E++ + + ++ ++ Y + + + + T Sbjct: 144 -SGQASDI-----EIHAREILDLRKRLNGMY-------VKHTGKTLKDVEKIMERDTFMT 190 Query: 215 GAEAKKVGLIDVV 227 +A+K GLID V Sbjct: 191 AEDAQKFGLIDEV 203 >gi|160945600|ref|ZP_02092826.1| hypothetical protein FAEPRAM212_03129 [Faecalibacterium prausnitzii M21/2] gi|158443331|gb|EDP20336.1| hypothetical protein FAEPRAM212_03129 [Faecalibacterium prausnitzii M21/2] Length = 227 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 64/198 (32%), Gaps = 43/198 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ + D L+V L++ GG AG A+ I + KP T V S Sbjct: 59 EHVIPQLVAVQEDPRIEGLLVLLNTVGGDVEAGLALAELIASIS--KPSATLVLGGGHSI 116 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G ++ ++ T+ + +P L LGV Sbjct: 117 GIPLAVSARHSFIVPTA------TMTVHPVRHSGL-ILGV------------------PQ 151 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS--DGR-------IWTGAEAKKV 221 + MQ + V+ +P + L G + G A K Sbjct: 152 TMHCFEQMQQRI-------TGFVAAHSGMPEKRYTQLMLHTGELVMDMGTVLDGRRAVKE 204 Query: 222 GLIDVVGGQEEVWQSLYA 239 LID +GG + LY Sbjct: 205 KLIDELGGLSDALAWLYG 222 >gi|317492909|ref|ZP_07951333.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919031|gb|EFV40366.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA] Length = 206 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 71/198 (35%), Gaps = 43/198 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 41 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPD- 99 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 100 -VSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGFQGQATDIEIHA 152 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 K + K M +++ ++ P ++ ++ R Sbjct: 153 KEIL----------------KVKARMNELM-----------AKHSGKPLEEIERDTERDR 185 Query: 212 IWTGAEAKKVGLIDVVGG 229 + EA + GL+D V Sbjct: 186 FLSADEAVEYGLVDSVMT 203 >gi|307271305|ref|ZP_07552584.1| Clp protease [Enterococcus faecalis TX0855] gi|306512054|gb|EFM81045.1| Clp protease [Enterococcus faecalis TX0855] Length = 254 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 39/218 (17%) Query: 73 LSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSI 132 ++S GG G I+ A++ + V + AAS +I+ A N + + + Sbjct: 48 INSNGGLVDMGNEIYTALRSYEGHVKVNIVMAGSAAS---IIAMAGNKVAISP------V 98 Query: 133 GVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRL 192 G + + V + + +Q + ++Y Sbjct: 99 GQIMIHN---------------VAMGAGGDYHTMDKA--SEILQKANKSLANAY------ 135 Query: 193 VSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE-----VWQSLYALGVDQSI 246 VS++ ++ L L D W T EA + G D + + V L I Sbjct: 136 VSKT-GKAKEEILALMDKETWLTAEEAVENGFADEIMFENTERPLLVADGGSGLISKDII 194 Query: 247 RKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKV 284 ++K +N + + ++ + I +KQ ++ Sbjct: 195 NEVKKLKNQQNEPVVMVNKKELKEMIAEAIVEVKQNEI 232 >gi|225567906|ref|ZP_03776931.1| hypothetical protein CLOHYLEM_03979 [Clostridium hylemonae DSM 15053] gi|225163194|gb|EEG75813.1| hypothetical protein CLOHYLEM_03979 [Clostridium hylemonae DSM 15053] Length = 232 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 88/234 (37%), Gaps = 41/234 (17%) Query: 32 EDNSPHVARIAIRGQIEDSQE------------LIERIERISRDDSATALIVSLSSPGGS 79 +S + + I G+IE + L+ + + + +++ L++ GG Sbjct: 25 NKSSHRIKLLTIIGEIEGHEAVSGNTKATKYEHLLPMLAEVEDSEEIEGMLILLNTLGGD 84 Query: 80 AYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--LVGSIGVLFQ 137 AG +I I + KP ++ V + S G ++ ++ + ++ + Sbjct: 85 VEAGLSIAEMIASLS--KPTVSLVLGGSHSIGGPLAVSAQYSFIVPSGTMIIHPVRSSGM 142 Query: 138 YPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESR 197 + V+ L + + + S S ++ + ++ + +++ Sbjct: 143 FIGVEQSLRNMLRTQDRIT-----RFLSKHSNMSQERIEKL--MLN-------------- 181 Query: 198 NIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 P + + G + G +A K GLID VGG + L+ + + +K K+ Sbjct: 182 --PTELVKDV--GTLLEGEDAVKEGLIDEVGGMSQALHKLHEMIDGERQKKHKN 231 >gi|154175235|ref|YP_001407437.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter curvus 525.92] gi|112803266|gb|EAU00610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter curvus 525.92] Length = 196 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+IED + ++ ++ + +D + + ++SPGG +G +IF + +K Sbjct: 30 IVMLSGEIEDGMAASIVAQLLFLEAEDPEKDIYLYINSPGGVITSGFSIFDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L+SC + A S + + + + + Sbjct: 89 -VCTICIGQAASMGAFLLSCGAPGKRYALPNSR------IMIHQPLGGARGQASDIEIQA 141 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + +K + + Q + +V + F Sbjct: 142 REILR--LKEILNGI--LAKNTGQKLNKIVKDTERDF----------------------F 175 Query: 213 WTGAEAKKVGLIDVV 227 + EAK+ GLID + Sbjct: 176 MSSHEAKEYGLIDKI 190 >gi|49475380|ref|YP_033421.1| ATP-dependent Clp protease proteolytic subunit [Bartonella henselae str. Houston-1] gi|67460276|sp|Q6G3Z3|CLPP_BARHE RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|49238186|emb|CAF27396.1| ATP-dependent clp protease proteolytic subunit [Bartonella henselae str. Houston-1] Length = 210 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 77/211 (36%), Gaps = 43/211 (20%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + ++ + ++ + + ++SPGG +G AI+ +Q ++ Sbjct: 37 IIFINGPVEDGMAMLVCAQLLFLEAENPKKEISLYINSPGGVVTSGMAIYDTMQFIRP-- 94 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G L+ A G F P + + + S Sbjct: 95 PVSTLCMGQAASMGSLLLTAGAK------------GHRFTLPNARIMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVR---LVSESRNIPYDKTLVLSDGRIWT 214 + + S E + + + M+ ++ Y V E R + D T Sbjct: 135 GGFQGQASDI-ERHAQDIIKMKQRLNEIYVQHTGQNYDVIE-RTLDRD--------HFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYALGVDQS 245 EAK+ GL+D +V Q ++ Sbjct: 185 AEEAKQFGLVD------DVIQYRAETEKEEK 209 >gi|238788008|ref|ZP_04631804.1| ATP-dependent Clp protease proteolytic subunit [Yersinia frederiksenii ATCC 33641] gi|238723956|gb|EEQ15600.1| ATP-dependent Clp protease proteolytic subunit [Yersinia frederiksenii ATCC 33641] Length = 194 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + + ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 29 IIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + S V + + + + Sbjct: 88 -VSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGFQGQATDIEIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 K + K M +++ + ++ ++ R Sbjct: 141 KEIL----------------KVKSRMNELM-----------AHHTGKSLEEIERDTERDR 173 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + +A + GL+D V + + Sbjct: 174 FLSAEQAVEYGLVDSVFTRRD 194 >gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Opitutaceae bacterium TAV2] gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Opitutaceae bacterium TAV2] Length = 222 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I I+D + +I ++ + +D + + ++SPGG G AI+ I ++ Sbjct: 46 IIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHLYINSPGGVVTGGMAIYDTINFLQCD- 104 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T AAS ++ A A S V + Sbjct: 105 -VVTYCVGQAASMATVLLSAGTKGKRFALPNSRV------MIHQ---------------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 P +++ A +++ ++ ++ SD + + Sbjct: 142 ---PSGGAGGQAADITIAAKEIL-----RWRRTLSETIARHTGKTPEQVDKDSDRDYYLS 193 Query: 215 GAEAKKVGLIDVV 227 EAK GL+D V Sbjct: 194 AQEAKDYGLVDHV 206 >gi|317129147|ref|YP_004095429.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522] gi|315474095|gb|ADU30698.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522] Length = 248 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 55/227 (24%) Query: 35 SPHVARIAIRGQIEDS------------QELIERIERISRDDSATALIVSLSSPGGSAYA 82 ++ + I GQIE + +I ++ ++ L++ L++ GG A Sbjct: 42 QSNIHMLTIIGQIEGHMQLPPQNKTTKYEHIIPQLVAAEQNPKIEGLLIILNTVGGDVEA 101 Query: 83 GEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETS--------LVG-SIG 133 G A+ I + KP +T V S G I+ A+N AET+ L G IG Sbjct: 102 GLALSEMISSLS--KPTVTLVLGGGHSIGVPIAVAANYSFIAETATMTIHPVRLTGLVIG 159 Query: 134 VLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLV 193 V + Y+ D++ ++ + SS ++ + F L+ Sbjct: 160 VPQTFEYLDKMQDRV-INFVTRHSS-----------ISEE--------------NFKELM 193 Query: 194 SESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYAL 240 N+ D + G +A GLI+ VGG + + L L Sbjct: 194 LSKGNLTRDIGTNV------IGKDAVSYGLINEVGGIGQAIKKLNEL 234 >gi|228926947|ref|ZP_04090013.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832682|gb|EEM78253.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 197 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 63/149 (42%), Gaps = 31/149 (20%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++S GGS +AG AI+ +++ K +K V +AAS +I+ A + +V + Sbjct: 20 IYVNSGGGSVFAGLAIYNMLKRNKAQK--TVYVDGVAASIASVIALAGDRVVVPSNAF-- 75 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 L + KP+ +G +I K++ + + ++ + + Y + Sbjct: 76 ----LMIH---KPWTYAVGNAIDFRKAA--------------EDLDNIESGIMNVYKENL 114 Query: 191 RLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 + I ++ L D W +G EA Sbjct: 115 KE-----GIEIEEIQQLVDAETWLSGEEA 138 >gi|229018991|ref|ZP_04175833.1| Translocation-enhancing protein tepA [Bacillus cereus AH1273] gi|229025236|ref|ZP_04181658.1| Translocation-enhancing protein tepA [Bacillus cereus AH1272] gi|228736064|gb|EEL86637.1| Translocation-enhancing protein tepA [Bacillus cereus AH1272] gi|228742319|gb|EEL92477.1| Translocation-enhancing protein tepA [Bacillus cereus AH1273] Length = 249 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLS--KPTVSLVLGGGHSI 127 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ +++ AET+ + +P + + + Sbjct: 128 GVPIAVSTDYSFIAETA------TMTIHP----------IRLTGLVIGV---------PQ 162 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V +R V++ + D+ L + G + G +A K Sbjct: 163 TFEYLDKMQERV-------IRFVTKHSKVTEDRFKELMFAKGNLTRDIGTNVIGGDAVKY 215 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + L L Sbjct: 216 GLIDDVGGIGGALRKLNEL 234 >gi|221633249|ref|YP_002522474.1| putative protease/transporter [Thermomicrobium roseum DSM 5159] gi|221156799|gb|ACM05926.1| putative protease/transporter [Thermomicrobium roseum DSM 5159] Length = 469 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 10/114 (8%) Query: 6 KKIKTRYVMLSLVTLTVVYFSWSSHVEDNSPHVARIAIRGQIED--SQELIERIERISRD 63 + +++R + L L+ + + S V + I G I + + + + + D Sbjct: 5 QNLRSRCMSLFLMIVGLALLGQSGAAAST--RVYLVEIDGAITPVVASYVDRALRQAA-D 61 Query: 64 DSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV---HEMAASAGYLI 114 A A+++ L +PGG + A + I + I +++ PVI V AASAG I Sbjct: 62 QGAEAVVIQLDTPGGLSSAMDEIIQDI--LQSPVPVIVYVAPEGARAASAGVFI 113 >gi|163841993|ref|YP_001626398.1| ATP-dependent endopeptidase Clp proteolytic subunit [Renibacterium salmoninarum ATCC 33209] gi|162955469|gb|ABY24984.1| ClpP [Renibacterium salmoninarum ATCC 33209] Length = 259 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 10/94 (10%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ ++ +D + + ++SPGGS AG AI+ +Q + N V+T +A Sbjct: 93 DNANLICSQLLLLASEDQDKEIYLYINSPGGSVTAGMAIYDTMQFIPND--VVTVATGLA 150 Query: 108 AS-AGYLISCASN-IIVAAETSLV------GSIG 133 AS +L+S + A + + G IG Sbjct: 151 ASMGQFLLSSGAKGKRYATPNARILMHQPSGGIG 184 >gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317850|sp|Q0AWF0|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 200 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + +I ++ + +D + + ++SPGGS AG AI+ +Q ++ Sbjct: 30 IIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L++ A + + + + + + Sbjct: 89 -VSTICVGLAASMGAFLLAAGKKGKRYALPNAE------IMIHQPAGGTQGQATDIEIHA 141 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + MK + +E + ++ +Q D Y Sbjct: 142 RRIM--NMKESLNKILAERTGQPLERIQKDTDRDY------------------------- 174 Query: 212 IWTGAEAKKVGLIDVV 227 T EAK+ G+ID V Sbjct: 175 FMTAQEAKEYGIIDEV 190 >gi|294054261|ref|YP_003547919.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221] gi|293613594|gb|ADE53749.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221] Length = 197 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 65/193 (33%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I I D + +I ++ + +D + + ++SPGGS G AI+ + ++ Sbjct: 31 IIFIGTPINDFVANAVIAQMLFLQMEDPKKDISLYINSPGGSVTDGMAIYDTMNFLQCD- 89 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T AAS L+ A A S V+ P +SI Sbjct: 90 -VVTYCVGQAASMATLLLAAGTPGKRYALPNSR-----VMMHQPTGGATGQTSDISI--- 140 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 K + M ++ + N ++ SD + T Sbjct: 141 ---AAKEILRW--------RERMNSLI-----------ASHTNKTAEEVAADSDRDFYLT 178 Query: 215 GAEAKKVGLIDVV 227 +A GL+D V Sbjct: 179 AQDACDYGLVDKV 191 >gi|269219685|ref|ZP_06163539.1| Clp protease [Actinomyces sp. oral taxon 848 str. F0332] gi|269210927|gb|EEZ77267.1| Clp protease [Actinomyces sp. oral taxon 848 str. F0332] Length = 197 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 35/190 (18%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ ++ +D + + ++SPGGS AG AI+ +Q ++ V+T MA Sbjct: 34 DNANIICAQMLLLAAEDPERDIYLYINSPGGSVTAGMAIYDTMQFIQPD--VVTVGMGMA 91 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L+S + + V L + P+ Sbjct: 92 ASMGQFLLSAGAKGKRYITPHARV--------------LLHQ-----------PLGGAGG 126 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-GAEAKKVGLI 224 +++ D++ + +E+ ++ + D W EA + G + Sbjct: 127 -----TATDIRINADLILQMKRELAEITAEATGKTPEQVIEDGDRDHWFNAQEALEYGFV 181 Query: 225 DVVGGQEEVW 234 D + Sbjct: 182 DRIVSSANAI 191 >gi|254779232|ref|YP_003057337.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori B38] gi|254001143|emb|CAX29101.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) [Helicobacter pylori B38] Length = 196 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 30 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + + S + + + + Sbjct: 89 -VSTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA------- 134 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++++ + + +++++ ++ +D + + Sbjct: 135 -----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMS 177 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 AKEAKEYGLIDKV 190 >gi|28493447|ref|NP_787608.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei str. Twist] gi|28572440|ref|NP_789220.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei TW08/27] gi|67460538|sp|Q83G49|CLPP1_TROWT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|67460539|sp|Q83I18|CLPP2_TROW8 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|28410571|emb|CAD66958.1| ATP dependent Clp protease proteolytic subunit 2 [Tropheryma whipplei TW08/27] gi|28476488|gb|AAO44577.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei str. Twist] Length = 207 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 32/192 (16%) Query: 40 RIAIRG-QIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G QI+D+ +++ ++ + D+ +I+ ++SPGGS A AI+ +Q ++ + Sbjct: 33 RIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPGGSFTAMTAIYDTMQYIRPQ 92 Query: 97 KPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + T AASA +I A G+ G P ++ + V Sbjct: 93 --IQTVCLGQAASAAAVILSA------------GTPGKRLALPN-----ARILIHQPVVA 133 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKT-LVLSDGRIWTG 215 SS +++ + W + +++ N + + +I + Sbjct: 134 SSGYGQASD---------IEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSS 184 Query: 216 AEAKKVGLIDVV 227 +A + GLID + Sbjct: 185 EQALEYGLIDQI 196 >gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus elongatus BP-1] gi|34222549|sp|Q8DJZ9|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2 [Thermosynechococcus elongatus BP-1] Length = 198 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +++D + +++ + + +D +++ ++SPGGS AG AI+ +Q +K+ Sbjct: 32 IIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSD- 90 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V+T +AAS +L++ + +A S + + Sbjct: 91 -VVTICVGLAASMGSFLLAAGTKGKRLALPHSR------IMIH------------QPSGG 131 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ + + ++ ++ Y + P +K D + + Sbjct: 132 TRGQATDI-----EIEAREILRVRRQLNELYAY-------HTGQPLEKIERDMDRDFFMS 179 Query: 215 GAEAKKVGLIDVV 227 EAK GLID V Sbjct: 180 AEEAKNYGLIDRV 192 >gi|311068202|ref|YP_003973125.1| TepA protein [Bacillus atrophaeus 1942] gi|310868719|gb|ADP32194.1| TepA [Bacillus atrophaeus 1942] Length = 245 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 43/199 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I +I I ++ L++ L++ GG AG AI + + KP ++ V S Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV + Y+ D++ V + S+ Sbjct: 126 GVPIAVSCDYSYIAETATMTIHPVRLTGLVIGVPQTFEYLDKMQDRV-VKFVTSHSN--- 181 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 V + F L+ N+ D + G +A Sbjct: 182 --------VTEE--------------KFKELMFSKGNLTRDIGTNV------VGKDAADY 213 Query: 222 GLIDVVGGQEEVWQSLYAL 240 GLID VGG + + L L Sbjct: 214 GLIDDVGGVGQAIKKLNQL 232 >gi|229544380|ref|ZP_04433439.1| peptidase S14 ClpP [Bacillus coagulans 36D1] gi|229325519|gb|EEN91195.1| peptidase S14 ClpP [Bacillus coagulans 36D1] Length = 245 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 43/210 (20%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + +I ++ I ++ ++V L++ GG AG AI + + KP ++ V S Sbjct: 66 EHMIPQLVAIEQNPKIEGVLVILNTVGGDVEAGLAISEMLASLS--KPTVSIVLGGGHSI 123 Query: 111 GYLISCASNIIVAAETS--------LVG-SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMK 161 G I+ + + AET+ L G IGV + Y+ +++ + + S Sbjct: 124 GVPIAVSCSYSFIAETATMTIHPIRLTGLVIGVPQTFEYLDKMQERV-IKFVTRHSHV-- 180 Query: 162 AEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKV 221 ++ +D+ F ++ N+ D + G EA + Sbjct: 181 ------------EEEVFKDL------MF----AKG-NLTRDIGTNI------VGQEAVQY 211 Query: 222 GLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 GLID VGG + L +L K K+ Sbjct: 212 GLIDEVGGIGKALGKLNSLIEKYRDEKGKE 241 >gi|13899067|gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Arabidopsis thaliana] gi|18377550|gb|AAL66941.1| ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana] Length = 309 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 91/245 (37%), Gaps = 43/245 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + +DS + + ++SPGGS AG I+ A+++ K V T +A Sbjct: 105 MTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKAD--VSTVCLGLA 162 Query: 108 AS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 AS +L++ GS G + P K + + P+ Sbjct: 163 ASMGAFLLAS-------------GSKGKRYCMPNSKVMIHQ-----------PLGTAGGK 198 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGA-EAKKVGLID 225 +E++ + +MM + F R+ P + +D + EAK+ GLID Sbjct: 199 ATEMSIRIREMMYHKIK-LNKIFSRI----TGKPESEIESDTDRDNFLNPWEAKEYGLID 253 Query: 226 VVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQTKVQ 285 V ++ G I I D PP DL + + +P + Sbjct: 254 AV--IDD--------GKPGLIAPIGDGTPPPKTKVWDLWKVEGTKEDNTNLPSERSMTQN 303 Query: 286 GLWAV 290 G A+ Sbjct: 304 GYAAI 308 >gi|56964790|ref|YP_176521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii KSM-K16] gi|67460456|sp|Q5WDK0|CLPP2_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|56911033|dbj|BAD65560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii KSM-K16] Length = 195 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 39/183 (21%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ + +D + + ++SPGGS AG AI+ +Q +K V T MAAS Sbjct: 41 ANSIVAQMLFLQAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPD--VSTICIGMAAS 98 Query: 110 -AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKAEP 164 +L++ + +A S V + ++ + + + + Sbjct: 99 MGAFLLTAGAKGKRMALPNSEV------MIHQPLGGMQGQAADMEIHARRII-------- 144 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 + + + ++ ++ R+ D T +AK+ GLI Sbjct: 145 --------QMREKLNQIMAERSGQPYERIA--RDTDRDN--------FMTAEQAKEYGLI 186 Query: 225 DVV 227 D V Sbjct: 187 DKV 189 >gi|297621676|ref|YP_003709813.1| ATP-dependent Clp protease proteolytic subunit [Waddlia chondrophila WSU 86-1044] gi|297376977|gb|ADI38807.1| ATP-dependent Clp protease proteolytic subunit [Waddlia chondrophila WSU 86-1044] Length = 196 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 31/182 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E + E+I ++ + D ++ ++SPGGS +G AI+ +Q + + PV T V +A Sbjct: 37 ETANEIIRKLWYLELKDPGKPILFVINSPGGSVDSGFAIWDQVQMISS--PVTTLVTGLA 94 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS L CA+ + + I ++ L + + + + K Sbjct: 95 ASMGSVLSLCAAKGKRYVTPQARI-MIHQPMIGGVIQGQATDLDIQAREILKTREK-LVR 152 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLID 225 + + K + + +D + EAK+ GLID Sbjct: 153 IYMDATGKDYETIDRAIDRDTWM-------------------------SAEEAKEFGLID 187 Query: 226 VV 227 + Sbjct: 188 AI 189 >gi|218885218|ref|YP_002434539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226706450|sp|B8DNL4|CLPP_DESVM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|218756172|gb|ACL07071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 201 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 44/201 (21%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + + ++ + ++ + + ++SPGGS AG AI+ +Q + + Sbjct: 27 RIILLGTPIDDQVASLICAQLLFLESENPEKEIYLYINSPGGSVTAGMAIYDTMQYITS- 85 Query: 97 KPVITEVHEMAAS-AGYLISCAS-NIIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 PV T AAS L++ + + A S + + + + Sbjct: 86 -PVATLCLGQAASMGALLLAAGAPGMRHALPNSR------IMIHQPSGGFHGQASDIDIH 138 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + V M+ ++ ++ P ++ ++ Sbjct: 139 AREVL--------------------RMKANLNEI-------MARHTGQPVERVADDTERD 171 Query: 212 IWTG-AEAKKVGLIDVVGGQE 231 + G AEAK+ G+ID + Sbjct: 172 YFMGPAEAKEYGIIDSILTSR 192 >gi|15611797|ref|NP_223448.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori J99] gi|308184578|ref|YP_003928711.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori SJM180] gi|6685330|sp|Q9ZL50|CLPP_HELPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|4155294|gb|AAD06311.1| ATP-DEPENDENT PROTEASE, PROTEOLYTIC SUBUNIT [Helicobacter pylori J99] gi|308060498|gb|ADO02394.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori SJM180] gi|317014204|gb|ADU81640.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori Gambia94/24] gi|325996073|gb|ADZ51478.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 2018] gi|325997669|gb|ADZ49877.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 2017] Length = 195 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 29 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + + S + + + + Sbjct: 88 -VSTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++++ + + +++++ ++ +D + + Sbjct: 134 -----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 AKEAKEYGLIDKV 189 >gi|269795731|ref|YP_003315186.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter keddieii DSM 10542] gi|269097916|gb|ACZ22352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter keddieii DSM 10542] Length = 207 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 73/183 (39%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 +++ + ++ ++ +D + + ++SPGGS AG AI+ +Q ++ V T MA Sbjct: 41 DNANAICAQMMLLAAEDPEKDIFLYINSPGGSITAGMAIYDTMQFIQPD--VATVAMGMA 98 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS +L+S + A + V+ P S + + Sbjct: 99 ASMGQFLLSSGTKGKRYATPHAR-----VMMHQP-----------------SGGIGGTAT 136 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLI 224 +N + + M+ V+ L++E ++ SD R +T EA + G I Sbjct: 137 DVR-INAELILHMKRVLAE-------LIAEQTGKSTEQIHTDSDRDRWFTAPEALEYGFI 188 Query: 225 DVV 227 D V Sbjct: 189 DKV 191 >gi|242309637|ref|ZP_04808792.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pullorum MIT 98-5489] gi|239523638|gb|EEQ63504.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pullorum MIT 98-5489] Length = 196 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 77/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQI+D + ++ ++ + +D + + ++SPGG +G +I+ + +K Sbjct: 30 IIMLSGQIDDGIASSIVAQLLFLEAEDPQKDIYLYINSPGGVVTSGLSIYDTMNYIKPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 + T AAS +L+SC + + S + + +P G + Sbjct: 89 -ICTICIGQAASMGAFLLSCGTKGKRYSLPNSR------IMIH---QPLGGAQGQATDI- 137 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 E+ K + ++ ++ ++ + N +K +D + + Sbjct: 138 -------------EIQAKEILRLKATLNEI-------LAANTNQSLEKISKDTDRDFFMS 177 Query: 215 GAEAKKVGLIDVV 227 EAKK GLID V Sbjct: 178 AQEAKKYGLIDNV 190 >gi|254503874|ref|ZP_05116025.1| Clp protease domain protein [Labrenzia alexandrii DFL-11] gi|222439945|gb|EEE46624.1| Clp protease domain protein [Labrenzia alexandrii DFL-11] Length = 342 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 46/157 (29%), Gaps = 33/157 (21%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 V L+S GG G +I+ A++ V V +AAS+ LI+ A + IV +L Sbjct: 44 VRLNSGGGYVDDGRSIYNALKVHGGD--VTVFVDGVAASSASLIAMAGDKIVMRSGAL-- 99 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 + + ++ + + ++ + F Sbjct: 100 ----MMIH------------DPATITVG------------TADDHDVSKQALERTAESFA 131 Query: 191 RLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDV 226 + W T EA G D Sbjct: 132 DTYAARSGNDAKDVRAAMKATTWMTADEAVAAGYADE 168 >gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus tusciae DSM 2912] gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus tusciae DSM 2912] Length = 192 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + +I ++ ++ +D + + ++SPGGS AG AI +Q ++ Sbjct: 29 IIFLGTPIDDQVANSVIAQLLFLAAEDPEKDVSLYINSPGGSVTAGMAILDTMQYIRPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS A L++ + A S + + V+ + + Sbjct: 88 -VATICVGMAASMAAVLLAAGAKGKRRALPNSE------IMIHQPLGGVQGQAVDIKIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + + ++ SE P + +D R Sbjct: 141 DRILR----------------VREKLNRIL-----------SERTGQPLSRIEEDTDRDR 173 Query: 212 IWTGAEAKKVGLIDVV 227 + EAK+ GLID V Sbjct: 174 FMSADEAKEYGLIDDV 189 >gi|224534182|ref|ZP_03674761.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia spielmanii A14S] gi|224514543|gb|EEF84858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia spielmanii A14S] Length = 197 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + +I ++ + +DS + + L+SPGGS AG AI+ +Q +K Sbjct: 33 IIFLSGEINDLKADTVIAQLLFLESEDSNKDIYLYLNSPGGSITAGLAIYDTMQYIKPD- 91 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGS-IGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L++ + SL S I + + + + + + Sbjct: 92 -VRTICIGQAASMGAFLLAAGAK---GKRESLTYSRIMIHQPWGGISGQASDINIQANEI 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 ++ ++ + + E + ++ T Sbjct: 148 L--------------------RLKKLIIDIMSNQIGVDKEKLALDMERDY------FMTS 181 Query: 216 AEAKKVGLIDVV 227 ++A K GLID + Sbjct: 182 SDALKYGLIDSI 193 >gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurihydrogenibium sp. YO3AOP1] gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurihydrogenibium sp. YO3AOP1] Length = 201 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 44/197 (22%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G I+D + ++ ++ + +D + + ++SPGG AG AI+ + +K Sbjct: 33 RIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGVVTAGLAIYDTMNYIKPD 92 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS 151 V+T AAS +L+S + + + + + + + + Sbjct: 93 --VVTICMGQAASMGAFLLSAGAKGKRYSLPNAR------IMIHQPLGGFQGQATDIEIH 144 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + ++ +++ +++ P +K ++ Sbjct: 145 AREIL--------------------RLKRMLNEY-------LAKHTGQPIEKIEADTERD 177 Query: 212 IW-TGAEAKKVGLIDVV 227 + + EAK+ GLID V Sbjct: 178 YFMSAEEAKEYGLIDKV 194 >gi|332283982|ref|YP_004415893.1| ATP-dependent Clp protease proteolytic subunit [Pusillimonas sp. T7-7] gi|330427935|gb|AEC19269.1| ATP-dependent Clp protease proteolytic subunit [Pusillimonas sp. T7-7] Length = 218 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G + D ++ ++ + ++ + + ++SPGGS YAG AI+ +Q +K Sbjct: 50 VIFFVGPVNDHTANLVVAQLLFLESENPDKDISLYINSPGGSVYAGMAIYDTMQFIKPD- 108 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L++ + S + + + + + Sbjct: 109 -VSTLCTGIAASMGAFLLAAGAKGKRYTLPNSR------IMIHQPSGGAQGQASDIQIQA 161 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + S + + ++ + V ++E ++ Sbjct: 162 REILS----------------LRERLNTILAKNTGQPVERIAE----DTERDN------F 195 Query: 213 WTGAEAKKVGLIDVV 227 + +A GL+D V Sbjct: 196 MSAEDAVSYGLVDKV 210 >gi|320103932|ref|YP_004179523.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera pallida ATCC 43644] gi|319751214|gb|ADV62974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera pallida ATCC 43644] Length = 252 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G I++ + LI++ + ++ + ++SPGGS Y+ A++ +Q V Sbjct: 49 IIFLEGPIDNVIANHLIKQFLYLQFENRTQGISFYINSPGGSVYSTLAVYDTMQFV--NC 106 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 P+ T MAAS ++ G F P+ K + + Sbjct: 107 PIATYCIGMAASGAAVLLAGGTK------------GKRFSLPHSKIMIHQ----PSGYVG 150 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGA 216 + E+ + + +++ +++ PY++ ++ R T A Sbjct: 151 GQVSDI-----EIQADEILKNKKLINEI-------LAKHTGQPYERIAKDTERDRYLTAA 198 Query: 217 EAKKVGLIDVV 227 EAK+ GL+D V Sbjct: 199 EAKEYGLVDEV 209 >gi|228987127|ref|ZP_04147251.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156200|ref|ZP_04284297.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus ATCC 4342] gi|228627271|gb|EEK84001.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus ATCC 4342] gi|228772581|gb|EEM21023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 197 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 31/149 (20%) Query: 71 VSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVG 130 + ++S GGS +AG AI+ +++ K +K V +AAS +I+ A + +V + Sbjct: 20 IYVNSGGGSVFAGLAIYNMLKRNKAQK--TVYVDGVAASIASVIALAGDRVVVPSNAF-- 75 Query: 131 SIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFV 190 L + + + F + + + ++ + + Y + Sbjct: 76 ----LMIH------------KPWTYAAGNAID----FRKA-AEDLDNIESGIMNVYKENL 114 Query: 191 RLVSESRNIPYDKTLVLSDGRIW-TGAEA 218 + + ++ L D W +G EA Sbjct: 115 KE-----GVEIEEIQQLVDAETWLSGEEA 138 >gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 209 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D +I ++ + ++ + + ++SPGGS AG AI+ +Q + K Sbjct: 44 VVFLVGEVNDQTANLVIAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFI---K 100 Query: 98 P-VITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 P V T MAAS G + CA A S V + + Sbjct: 101 PHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSRV------MIHQPLGGA---------- 144 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--I 212 E+ + + +++ ++ +++ D +D R Sbjct: 145 --RGQASDI-----EIQAREILYLRERLNKI-------LADRTGQSIDTIAKDTD-RDNF 189 Query: 213 WTGAEAKKVGLIDVV 227 + +A++ GLID V Sbjct: 190 MSAEQAREYGLIDKV 204 >gi|317405213|gb|EFV85552.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter xylosoxidans C54] Length = 217 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 69/200 (34%), Gaps = 41/200 (20%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D+ ++ ++ + ++ + + ++SPGGS YAG AI+ +Q VK Sbjct: 50 LIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVYAGMAIYDTMQFVKPD- 108 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T +AAS +L++ S + + + + + Sbjct: 109 -VSTLCTGLAASMGAFLLAAGKKGKRFTLPNSR------IMIHQPSGGAQGQASDIQIQA 161 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ + + ++ + ++ Sbjct: 162 REIL----------------DLRERLNRILADNTGQSIDRIA----LDTERDN------F 195 Query: 213 WTGAEAKKVGLIDVVGGQEE 232 + +A GL+D V Sbjct: 196 MSAEDAVSYGLVDKVMTSRS 215 >gi|221068424|ref|ZP_03544529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Comamonas testosteroni KF-1] gi|220713447|gb|EED68815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Comamonas testosteroni KF-1] Length = 202 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + ++ + ++SPGGS AG AIF + +K Sbjct: 37 VIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIFDTMNFIKPD- 95 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L+S + A + V + + + Sbjct: 96 -VSTLCTGMAASMGAFLLSAGAKGKRYALPNAQV------MIHQPLGGARGQA------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + + ++++E P +K ++ + + Sbjct: 142 -----------------TEIEIHAREILKTRERLNKILAERTGQPLEKIQNDTERDYFLS 184 Query: 215 GAEAKKVGLIDVV 227 EAK GL+D V Sbjct: 185 ADEAKDYGLVDQV 197 >gi|15645413|ref|NP_207587.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 26695] gi|108563204|ref|YP_627520.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori HPAG1] gi|207108488|ref|ZP_03242650.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori HPKX_438_CA4C1] gi|2493736|sp|P56156|CLPP_HELPY RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|185177747|pdb|2ZL0|A Chain A, Crystal Structure Of H.Pylori Clpp gi|185177748|pdb|2ZL0|B Chain B, Crystal Structure Of H.Pylori Clpp gi|185177749|pdb|2ZL0|C Chain C, Crystal Structure Of H.Pylori Clpp gi|185177750|pdb|2ZL0|D Chain D, Crystal Structure Of H.Pylori Clpp gi|185177751|pdb|2ZL0|E Chain E, Crystal Structure Of H.Pylori Clpp gi|185177752|pdb|2ZL0|F Chain F, Crystal Structure Of H.Pylori Clpp gi|185177753|pdb|2ZL0|G Chain G, Crystal Structure Of H.Pylori Clpp gi|185177754|pdb|2ZL0|H Chain H, Crystal Structure Of H.Pylori Clpp gi|185177755|pdb|2ZL0|I Chain I, Crystal Structure Of H.Pylori Clpp gi|185177756|pdb|2ZL0|J Chain J, Crystal Structure Of H.Pylori Clpp gi|185177757|pdb|2ZL0|K Chain K, Crystal Structure Of H.Pylori Clpp gi|185177758|pdb|2ZL0|L Chain L, Crystal Structure Of H.Pylori Clpp gi|185177759|pdb|2ZL0|M Chain M, Crystal Structure Of H.Pylori Clpp gi|185177760|pdb|2ZL0|N Chain N, Crystal Structure Of H.Pylori Clpp gi|185177761|pdb|2ZL2|A Chain A, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177762|pdb|2ZL2|B Chain B, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177763|pdb|2ZL2|C Chain C, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177764|pdb|2ZL2|D Chain D, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177765|pdb|2ZL2|E Chain E, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177766|pdb|2ZL2|F Chain F, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177767|pdb|2ZL2|G Chain G, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177768|pdb|2ZL2|H Chain H, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177769|pdb|2ZL2|I Chain I, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177770|pdb|2ZL2|J Chain J, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177771|pdb|2ZL2|K Chain K, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177772|pdb|2ZL2|L Chain L, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177773|pdb|2ZL2|M Chain M, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|185177774|pdb|2ZL2|N Chain N, Crystal Structure Of H.Pylori Clpp In Complex With The Peptide Nvlgftq gi|2313923|gb|AAD07842.1| ATP-dependent clp protease proteolytic component (clpP) [Helicobacter pylori 26695] gi|107836977|gb|ABF84846.1| ATP-dependent clp protease proteolytic component [Helicobacter pylori HPAG1] Length = 196 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 30 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + + S + + + + Sbjct: 89 -VSTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA------- 134 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++++ + + +++++ ++ +D + + Sbjct: 135 -----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMS 177 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 AKEAKEYGLIDKV 190 >gi|256849988|ref|ZP_05555419.1| Clp protease [Lactobacillus crispatus MV-1A-US] gi|262046764|ref|ZP_06019724.1| Clp protease [Lactobacillus crispatus MV-3A-US] gi|256713477|gb|EEU28467.1| Clp protease [Lactobacillus crispatus MV-1A-US] gi|260572746|gb|EEX29306.1| Clp protease [Lactobacillus crispatus MV-3A-US] Length = 231 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 33/179 (18%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 I S ++V ++S GG AG I+ ++K + + A SA I Sbjct: 33 SSIRDALNQASGQDIVVEINSRGGYVDAGSEIYTELKKYQGNIDIQIV--GYACSAASWI 90 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A + + + T+ + + + A+ + Sbjct: 91 ALAGDTVEMSPTAQL------------------------MIHRASGGADGNV------DD 120 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE 232 + +D V L ++ + L W A G +D + ++E Sbjct: 121 LASAMQGLDQMDQALVDLYAKRTGKSAQEVYQLMAKESWMNAKTAVANGFVDSIMFEDE 179 >gi|227878727|ref|ZP_03996639.1| S14 family endopeptidase ClpP [Lactobacillus crispatus JV-V01] gi|227861696|gb|EEJ69303.1| S14 family endopeptidase ClpP [Lactobacillus crispatus JV-V01] Length = 230 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 33/179 (18%) Query: 55 ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLI 114 I S ++V ++S GG AG I+ ++K + + A SA I Sbjct: 32 SSIRDALNQASGQDIVVEINSRGGYVDAGSEIYTELKKYQGNIDIQIV--GYACSAASWI 89 Query: 115 SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKA 174 + A + + + T+ + + + A+ + Sbjct: 90 ALAGDTVEMSPTAQL------------------------MIHRASGGADGNV------DD 119 Query: 175 VQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVVGGQEE 232 + +D V L ++ + L W A G +D + ++E Sbjct: 120 LASAMQGLDQMDQALVDLYAKRTGKSAQEVYQLMAKESWMNAKTAVANGFVDSIMFEDE 178 >gi|289810836|ref|ZP_06541465.1| putative periplasmic protease [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 50 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%) Query: 197 RNIPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYA 239 R P ++ G W G +A + GL+D + +EV L Sbjct: 1 RMRPALDIEQVATGEHWYGQQALEKGLVDEINTSDEVILGLME 43 >gi|208434705|ref|YP_002266371.1| ATP-dependent clp protease proteolytic component [Helicobacter pylori G27] gi|210134994|ref|YP_002301433.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori P12] gi|217032887|ref|ZP_03438364.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128] gi|298736497|ref|YP_003729023.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori B8] gi|116243140|sp|Q1CT76|CLPP_HELPH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706454|sp|B5Z7F6|CLPP_HELPG RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|208432634|gb|ACI27505.1| ATP-dependent clp protease proteolytic component [Helicobacter pylori G27] gi|210132962|gb|ACJ07953.1| ATP-dependent clp protease proteolytic component [Helicobacter pylori P12] gi|216945381|gb|EEC24049.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128] gi|298355687|emb|CBI66559.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori B8] gi|317009196|gb|ADU79776.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori India7] gi|317011009|gb|ADU84756.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori SouthAfrica7] gi|317012604|gb|ADU83212.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori Lithuania75] gi|317178846|dbj|BAJ56634.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori F30] gi|332673403|gb|AEE70220.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 83] Length = 195 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 29 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + + S + + + + Sbjct: 88 -VSTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++++ + + +++++ ++ +D + + Sbjct: 134 -----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 AKEAKEYGLIDKV 189 >gi|25008291|sp|Q8NN01|CLPP2_CORGL RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|21325183|dbj|BAB99805.1| Protease subunit of ATP-dependent Clp proteases [Corynebacterium glutamicum ATCC 13032] Length = 201 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 39/188 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +L +I +S +D + + ++SPGGS AG AI+ ++ + T +AAS Sbjct: 43 ANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKYSPCD--IATYGMGLAAS 100 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEP 164 G + A + + + V + + + ++ Sbjct: 101 MGQFLLSGGTKGKRFALPHAR------IMMHQPSAGVGGTAADIAIQAEQFAATK----- 149 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +M Q + + + F + I D R +T EAK GL+ Sbjct: 150 ----------REMAQLIAEHTGQTFEQ-------ISKDSDRD----RWFTAQEAKDYGLV 188 Query: 225 DVVGGQEE 232 D V E Sbjct: 189 DHVITLAE 196 >gi|296102058|ref|YP_003612204.1| ATP-dependent protease [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056517|gb|ADF61255.1| ATP-dependent protease [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 638 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 40/207 (19%) Query: 26 SWSSHVEDNSPHVARIAIRGQIED----SQELIERIERISRDDSATALIVSLSSPGGSAY 81 W + +S + A I+I +I +Q+ E ++ + + + + + SPGG + Sbjct: 3 GWYTIKAASSGNSADISIYEEIGGWGITAQQFSEDLKTLGD---ISHINLHIHSPGGDVF 59 Query: 82 AGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYV 141 G AI+ + K + V ++ +AAS +I+ A + IV E +L + + Sbjct: 60 DGIAIYNLLNKHPAK--VTVQIDGLAASMASVIAMAGDRIVMPENAL------MMIH--- 108 Query: 142 KPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPY 201 G+ S + ++E+ K ++ + + Sbjct: 109 ----KPWGI------SGGNANDMRDYAELLDKVESVL-----------IPAYARKTGKSA 147 Query: 202 DKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + + + W G E G D + Sbjct: 148 ESLAEMLEDETWMDGRECVAQGFADEL 174 >gi|302556966|ref|ZP_07309308.1| Clp protease [Streptomyces griseoflavus Tu4000] gi|302474584|gb|EFL37677.1| Clp protease [Streptomyces griseoflavus Tu4000] Length = 218 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 49/212 (23%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G D + + ++ +S +D T + + ++SPGGS +AG AI+ ++ + N Sbjct: 38 RIVLLGTQVDEVSANRVCAQLLILSAEDPRTDISLYINSPGGSVHAGLAIYDTMRLIPND 97 Query: 97 KPVITEVHEMAASAGYLISCAS--NIIVAAETSLV------GSIGVLFQYPYVKPFLDKL 148 V T AAS G + C A + V G IG ++ + L Sbjct: 98 --VATLAMGFAASMGQFLLCVGAPGKRYALPNARVMMHQPSGGIG--GTTADIEIQAESL 153 Query: 149 GVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLS 208 + ++++ + + P+ + SR+ D Sbjct: 154 DFTKRTIE-----RITAEHTGQTPETI--------------------SRDGDRD------ 182 Query: 209 DGRIWTGAEAKKVGLIDV-VGGQEEVWQSLYA 239 R +T +A++ G++D V ++V + Sbjct: 183 --RWFTAEQAREYGMVDRVVESLDDVRPAAAR 212 >gi|320102927|ref|YP_004178518.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera pallida ATCC 43644] gi|319750209|gb|ADV61969.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera pallida ATCC 43644] Length = 198 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 73/194 (37%), Gaps = 38/194 (19%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI I G D S ++ ++ ++ +D + + ++SPGGS AG AI+ +Q V Sbjct: 28 RIIILGTAIDESVSNSVVAQLLYLASEDPKADIRLYINSPGGSVTAGLAIYDMMQSVPCD 87 Query: 97 KPVITEVHEMAAS-AGYLISC-ASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T AS L++ A+ A G + + +P G + Sbjct: 88 --VATYCIGQCASMGSLLLAAGAAGKRHAMPH------GRIMIH---QPLAGMEGTATDI 136 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIW 213 + ++ + M+ ++ Y+ +K +D R Sbjct: 137 M--------------IHAEEFLRMKKQLNGIYNH-------HTGQSLEKLEQDTDRDRFM 175 Query: 214 TGAEAKKVGLIDVV 227 + EAK+ GLID + Sbjct: 176 SPREAKEYGLIDHI 189 >gi|288549991|ref|ZP_05968896.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter cancerogenus ATCC 35316] gi|288316903|gb|EFC55841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter cancerogenus ATCC 35316] Length = 194 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 29 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + + Sbjct: 88 -VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 140 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ ++ ++ R Sbjct: 141 REIL----------------KVKARMNELM-----------AQHTGQSLEQIERDTERDR 173 Query: 212 IWTGAEAKKVGLIDVV 227 + EA + GL+D V Sbjct: 174 FLSAPEAVEYGLVDSV 189 >gi|307328456|ref|ZP_07607631.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113] gi|306885868|gb|EFN16879.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113] Length = 204 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 67/184 (36%), Gaps = 36/184 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ ++ D + + ++SPGGS AG AI+ +Q ++N V+T +AAS Sbjct: 42 ANKITAQLLLLAADPD-KDIYLYINSPGGSISAGMAIYDTMQYIQND--VVTIAMGLAAS 98 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIK-SVKSSPMKAEPSP 166 G + A A + I + + + + + + + AE + Sbjct: 99 MGQFLLSAGTPGKRFALPNAE---ILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTS 155 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 F + V+ + D ++ EAK+ GL+D Sbjct: 156 FH--TGQTVEQIVRDSDRDRW-------------------------FSAQEAKEYGLVDD 188 Query: 227 VGGQ 230 V Sbjct: 189 VMTS 192 >gi|319763664|ref|YP_004127601.1| ATP-dependent clp protease, proteolytic subunit clpp [Alicycliphilus denitrificans BC] gi|330824071|ref|YP_004387374.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicycliphilus denitrificans K601] gi|317118225|gb|ADV00714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicycliphilus denitrificans BC] gi|329309443|gb|AEB83858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alicycliphilus denitrificans K601] Length = 202 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D ++ ++ + ++ + ++SPGGS AG AI+ +Q +K Sbjct: 37 VIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPD- 95 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L++ + + S + + + + Sbjct: 96 -VSTLCCGFAASMGAFLLAAGAKGKRFSLPNSK------IMIHQVLGGARGQA------- 141 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + + R+++E +K ++ + T Sbjct: 142 -----------------TDIEIHARDILRTKDQMNRILAERTGQSIEKVKADTERDYFMT 184 Query: 215 GAEAKKVGLIDVV 227 EA+ GL+D V Sbjct: 185 ADEARDYGLVDQV 197 >gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437] Length = 206 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +I D+ ++ ++ + +D + + ++SPGGS AG AI+ +Q VK Sbjct: 41 IIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQLYINSPGGSISAGFAIYDTMQHVKCD- 99 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 + T MAAS +L+S + +A S V + + + +S Sbjct: 100 -IQTICIGMAASMGAFLLSSGTKGKRLALPNSEV------MIHQPLGGAQGQASDIEISA 152 Query: 153 KSVKSSPMKAEPS-PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 K + M+ + S+ + ++ +Q D + Sbjct: 153 KRILR--MRDRLNQLLSDQTGQPLKKIQQDTDRDH------------------------- 185 Query: 212 IWTGAEAKKVGLIDVV 227 + +AKK GLID + Sbjct: 186 FMSAEDAKKYGLIDKI 201 >gi|148284741|ref|YP_001248831.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi str. Boryong] gi|189183283|ref|YP_001937068.1| ATP-dependent Clp protease proteolytic subunit [Orientia tsutsugamushi str. Ikeda] gi|146740180|emb|CAM80416.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi str. Boryong] gi|189180054|dbj|BAG39834.1| ATP-dependent Clp protease proteolytic subunit [Orientia tsutsugamushi str. Ikeda] Length = 206 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 77/207 (37%), Gaps = 43/207 (20%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+IED + ++ ++ + + + + ++SPGG+ AG AI+ +Q +K+ Sbjct: 35 IVFVCGEIEDHMANLVVAQLLFLEAESPDKKIFMYINSPGGAVTAGMAIYDTMQYIKS-- 92 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 PV+T A S G L+ A S + + + + + Sbjct: 93 PVLTLCLGQACSMGSLLLAAGQKSMRHCLPNSR------IMIHQPSGGFRGQATDIQIHA 146 Query: 153 KSVKSSPMKA-EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + + MK + + + +Q++++ ++ F+ V+ Sbjct: 147 QEIL--KMKKIINNLYVHHTNQPLQVIEESMER--DNFMDPVA----------------- 185 Query: 212 IWTGAEAKKVGLIDVVGGQEEVWQSLY 238 AK+ GL+D + + Sbjct: 186 ------AKEFGLVDHITTERAQVAERK 206 >gi|23099067|ref|NP_692533.1| translocation enhancing protein [Oceanobacillus iheyensis HTE831] gi|22777295|dbj|BAC13568.1| translocation enhancing protein [Oceanobacillus iheyensis HTE831] Length = 244 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 73/196 (37%), Gaps = 43/196 (21%) Query: 51 QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASA 110 + L+ ++ I ++ L++ L++ GG AG A+ I + KP ++ V S Sbjct: 68 EHLLPQLIAIEQNPKIEGLVILLNTVGGDVEAGLALAEMISSLS--KPTVSIVLGGGHSI 125 Query: 111 GYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 G I+ A++ T+ + +P + + + Sbjct: 126 GVPIAVATDHSFIVPTA------TMTIHP----------IRLTGLVIGV---------PQ 160 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL--SDGRI-------WTGAEAKKV 221 + + MQ+ V + V NI +K L + G + GA+A + Sbjct: 161 TFEYLDKMQERV-------IDFVVHHSNIKEEKFKELMFAQGNLTRDIGTNVVGADAVEF 213 Query: 222 GLIDVVGGQEEVWQSL 237 GLI+ VGG +E L Sbjct: 214 GLINDVGGVKEAMIKL 229 >gi|167754483|ref|ZP_02426610.1| hypothetical protein ALIPUT_02779 [Alistipes putredinis DSM 17216] gi|167659108|gb|EDS03238.1| hypothetical protein ALIPUT_02779 [Alistipes putredinis DSM 17216] Length = 221 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I D + + ++ + D + + ++SPGGS AG I+ +Q V+ Sbjct: 56 IIFLGAPIYDDAANIIQAQLLFLESADPEKDIQIYINSPGGSVTAGLGIYDTMQLVQPD- 114 Query: 98 PVITEVHEMAAS-AGYLI-SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS L+ + A+ A S V + + + Sbjct: 115 -VATICTGLAASMGAVLLTAGAAGKRSALPHSRV------MIHQPLGGAQGQA------- 160 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 +++ + + +++ P +K +D W + Sbjct: 161 -----------------SDIEITAREIRKTKQELYEIIAAHSGAPIEKIEKDADRDYWLS 203 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 204 AREAKEYGLIDEV 216 >gi|46198995|ref|YP_004662.1| putative protease/transporter [Thermus thermophilus HB27] gi|46196619|gb|AAS81035.1| putative protease/transporter [Thermus thermophilus HB27] Length = 433 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 80/227 (35%), Gaps = 51/227 (22%) Query: 37 HVARIAIRGQIEDSQEL-IERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKN 95 + I G+I+ + + +E+ + + A+ + + +PGG A I I ++ Sbjct: 31 KTYLVPIEGEIDPALAVFVEQALARAEREGASGVAFLIDTPGGRVDAAIRISDRI--LQT 88 Query: 96 RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 P + V A SAG LI+ + IV S +G Sbjct: 89 PLPTLAVVQN-AFSAGALIALSCRQIVMLPGSEIG------------------------- 122 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVL-------- 207 + + P E Q V+ + F R V+E+R P + + Sbjct: 123 --AALPVVALPLQEPQAAD----QKVISALKGKF-RAVAEARGRPVELAEAMVDPNLEVP 175 Query: 208 ---SDGR--IWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKI 249 + G + +A ++ + D+ ++++L A G + ++ Sbjct: 176 GLSAKGEPLTLSADKAVELKVADL--KAASLYEALQAAGFSPEVERL 220 >gi|119383115|ref|YP_914171.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222] gi|119383741|ref|YP_914797.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222] gi|119372882|gb|ABL68475.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222] gi|119373508|gb|ABL69101.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222] Length = 280 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 43/204 (21%) Query: 45 GQIEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVH 104 G+ ++ + + +I + D ++V+++SPGG + G AI+ +++ + V ++ Sbjct: 57 GEGVTAKRVAAALRQIGKRD----VVVNINSPGGDFFEGLAIYNTLREHPAK--VTVKIL 110 Query: 105 EMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE- 163 +AASA +I+ A + + L+G G L + + V + A Sbjct: 111 GLAASAASVIAMAGDEV------LIGRAGFLMIH------------NTWVVAAGDRHALR 152 Query: 164 --PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAE-AKK 220 + +V + + + K + D W G + A Sbjct: 153 EVADWLEPFDSASVDIY---------------AARTGLDGKKLGQMLDRETWIGGQSAVD 197 Query: 221 VGLIDVVGGQEEVWQSLYALGVDQ 244 G D + +EV S G + Sbjct: 198 QGFADSLLAADEVSASARQEGEAR 221 >gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana CCMP1335] gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana CCMP1335] Length = 201 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + +I+D + ++I + + +DS + + ++SPGGS +G AIF A+Q +K+ Sbjct: 32 IIFLGSEIDDELANQIIGVMLYLDEEDSTKPIYLYINSPGGSVISGLAIFDAMQLIKSE- 90 Query: 98 PVITEVHEMAASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDK-LGVSIKS 154 VIT +AAS I A + +A +S + + + + + ++ Sbjct: 91 -VITINLGLAASMASFILSAGSKGKRLALPSSR------IMIHQPMGGAQGQAQDIKVE- 142 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT 214 + ++D + Y F +E D+ + Sbjct: 143 -----------------AAQIMRIRDNLVKMYSMFTGQTTEQITKDLDRDN------FMS 179 Query: 215 GAEAKKVGLIDVV 227 EA + GLID V Sbjct: 180 AQEALEYGLIDRV 192 >gi|299821953|ref|ZP_07053841.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi DSM 20601] gi|299817618|gb|EFI84854.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi DSM 20601] Length = 203 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 35/200 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + I+D + ++ ++ + D + + ++SPGGS AG AI+ + VK Sbjct: 35 IIMLGSAIDDNVANSIVAQLLFLDSQDPDKDIYLYINSPGGSISAGMAIYDTMNLVKAD- 93 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T MAAS +L++ ++ A S + + + + I+ Sbjct: 94 -VQTIGMGMAASMGSFLLAAGADGKRFALPNSE------IMIHQPLGGAQGQA-TEIEIA 145 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 +K + M ++ + +++ R+ D T Sbjct: 146 ARHILK------------IKERMNRILSEKTGQPIEVIA--RDTDRDN--------FMTA 183 Query: 216 AEAKKVGLIDVVGGQEEVWQ 235 EAK+ GLID + + + Sbjct: 184 DEAKEYGLIDDIISSKNALK 203 >gi|225453100|ref|XP_002271649.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 320 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 82/244 (33%), Gaps = 49/244 (20%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + +I ++ + +D + + ++SPGGS AG I+ A++ K V T +A Sbjct: 101 MTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIYDAMKLCKAD--VSTVCLGLA 158 Query: 108 AS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIKSVKSSPMKA 162 AS +L++ S S V + ++G+ I+ + +K Sbjct: 159 ASMGAFLLASGSKGKRFCMPNSRV------MIHQPLGTAGGKATEMGIRIREMMYHKIK- 211 Query: 163 EPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVG 222 S + K Q ++ D F+ W EAK+ G Sbjct: 212 LNKILSRITGKPEQQIEADTDR--DNFMNA--------------------W---EAKEYG 246 Query: 223 LIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNYWFCDLKNLSISSLLEDTIPLMKQT 282 LID V ++ G + D PP L + S + +P + Sbjct: 247 LIDAV--IDD--------GKPGLVAPTADAGPPPKTRVWGLWKVEGSRKAKKNLPSEHKL 296 Query: 283 KVQG 286 G Sbjct: 297 LQNG 300 >gi|125623498|ref|YP_001031981.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis subsp. cremoris MG1363] gi|18203672|sp|Q9ZAB0|CLPP_LACLM RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|11528583|gb|AAD01866.2| protease [Lactococcus lactis subsp. cremoris MG1363] gi|124492306|emb|CAL97240.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis subsp. cremoris MG1363] gi|300070250|gb|ADJ59650.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 199 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 76/191 (39%), Gaps = 31/191 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 30 IIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 88 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V MAAS G +I+ + G F P + + + Sbjct: 89 -VQTIVMGMAASMGTIIASSGTK------------GKRFMLPNAEYLIHQ---------- 125 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 PM + + ++ + + + ++++++ N ++ ++ W Sbjct: 126 -PMGGAGQGTQQT---DMAIVAEQLLKTRKRLEQILADNSNRSLEQIHKDAERDHWMDAK 181 Query: 217 EAKKVGLIDVV 227 E + G ID + Sbjct: 182 ETLEYGFIDEI 192 >gi|83943111|ref|ZP_00955571.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp. EE-36] gi|83846119|gb|EAP83996.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp. EE-36] Length = 211 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 78/200 (39%), Gaps = 37/200 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + + + ++SPGG +G +I+ +Q +K + Sbjct: 30 IIFLNGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPK- 88 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A G+ F P + + + S Sbjct: 89 -VSTLVIGQAASMGSLLLQAGEK------------GMRFSLPNSRVMVHQP--------S 127 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWTGA 216 + + + ++ + Q ++ ++ Y + P +K L + Sbjct: 128 GGYQGQATDI-MIHAQETQKLKTRLNEIY-------VKHTGQPLEKVEAALERDNFMSPE 179 Query: 217 EAKKVGLIDVV----GGQEE 232 EAK GLID + G ++ Sbjct: 180 EAKDWGLIDEIVENRGKMDD 199 >gi|255647414|gb|ACU24172.1| unknown [Glycine max] Length = 238 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 74/195 (37%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G I D ++ ++ + ++S+ + + L+SPGG+ AG AI+ +Q +++ Sbjct: 55 IICINGPISDDTAHVVVAQLLFLESENSSKPINMYLNSPGGAVTAGLAIYDTMQYIRS-- 112 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 PV T AAS L++ + + + + + + + Sbjct: 113 PVNTICMGQAASMGSLLLAAGAKGERRSLPNA------TIMIHQPSGGYSGQAKDIAIHT 166 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 K + + +++ ++V+++Q +D Sbjct: 167 KHIVR-VWDSLNELYAKHTGQSVEVIQTNMDRDN-------------------------F 200 Query: 213 WTGAEAKKVGLIDVV 227 T EAK+ GLID V Sbjct: 201 MTPKEAKEFGLIDEV 215 >gi|242279532|ref|YP_002991661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio salexigens DSM 2638] gi|242122426|gb|ACS80122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio salexigens DSM 2638] Length = 202 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ D + + ++ + +D + + ++SPGG AG AI+ +Q + Sbjct: 30 IILLSGEVNDHVASVICAQLLFLESEDPEKEIYMYINSPGGVVTAGMAIYDTMQYISA-- 87 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 PV T AAS G + A G + P+ + + + Sbjct: 88 PVATLCMGQAASMGAFLLSAGEK------------GQRYSLPHSRILIHQ---------- 125 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IWTG 215 P+ ++++ +A +++ +++E+ ++ +D R + Sbjct: 126 -PLGGAQGQATDIDIQAREIL-----RLRKSLNSIMAENTGRTVEEIEKDTD-RDNFMSA 178 Query: 216 AEAKKVGLIDVV 227 EA + GLID V Sbjct: 179 QEAVEYGLIDKV 190 >gi|325680788|ref|ZP_08160326.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Ruminococcus albus 8] gi|324107568|gb|EGC01846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Ruminococcus albus 8] Length = 196 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 74/194 (38%), Gaps = 48/194 (24%) Query: 46 QIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEV 103 I+D + + ++ + D + + ++SPGGS AG AI+ + +K V T Sbjct: 35 PIDDHVASLVTAQLLFLESQDPEKDIDLYINSPGGSVTAGMAIYDTMNYIKCD--VNTIC 92 Query: 104 HEMAAS-AGYLISCASN-IIVAAETS-------LVGSIGVLFQYPYVKPFLDKLGVSIKS 154 MAAS +L+SC + + S L+G G+ Q VK + Sbjct: 93 MGMAASMGAFLLSCGTKGKRFSLPNSEIMIHQPLIGGGGISGQCTDVK-------IHSDH 145 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 + ++ + + ++ +E+ ++ + ++ + Sbjct: 146 LVAT----------------REKLNKIL-----------AENTGKSIEQIAIDTERDNYL 178 Query: 214 TGAEAKKVGLIDVV 227 + EA + GLID V Sbjct: 179 SAQEAMEYGLIDKV 192 >gi|29839992|ref|NP_829098.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila caviae GPIC] gi|33300944|sp|Q824C7|CLPP1_CHLCV RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|29834339|gb|AAP04976.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila caviae GPIC] Length = 191 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 41/166 (24%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS--NIIVAAET 126 ++ ++SPGGS AG A++ I+ + + PV T V +AAS G ++S + A Sbjct: 53 IVFVINSPGGSVDAGFAVWDQIKMMTS--PVTTVVTGLAASMGSVLSLCAAPGRRFATPH 110 Query: 127 SLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 S + SIG P + L + + + + K + E + ++++ + Sbjct: 111 SRIMIHQPSIG----GP-ITGQATDLDIHAREILKTK-KRIVDVYLEATGQPREVIEKAI 164 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D R++ W T EAK GL+D + Sbjct: 165 D-------------RDM-------------WMTADEAKDFGLLDGI 184 >gi|186475776|ref|YP_001857246.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia phymatum STM815] gi|184192235|gb|ACC70200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia phymatum STM815] Length = 219 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 39/194 (20%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D +I ++ + ++ + ++SPGGS AG AI+ +Q +K Sbjct: 54 VVFLVGEVNDQTANLVIAQLLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPD- 112 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L++ + A + V + + Sbjct: 113 -VSTLCMGLAASMGAFLLAAGAKGKRFALPNARV------MIHQPLGGA----------- 154 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--IW 213 E+ + + +++ ++ L+S P ++ +D R Sbjct: 155 -RGQASDI-----EIQAREILYLKERLNQ-------LLSHHTGQPVERIQRDTD-RDNFM 200 Query: 214 TGAEAKKVGLIDVV 227 +G +A+ GL+D V Sbjct: 201 SGDDAQAYGLVDQV 214 >gi|270285501|ref|ZP_06194895.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum Nigg] gi|270289512|ref|ZP_06195814.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum Weiss] gi|301336898|ref|ZP_07225100.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum MopnTet14] gi|14194529|sp|Q9PJW1|CLPP1_CHLMU RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 Length = 192 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 41/166 (24%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAASAGYLISCAS--NIIVAAET 126 ++ ++SPGGS AG A++ I+ + + PV T V +AAS G ++S + A Sbjct: 54 IVFVINSPGGSVDAGFAVWDQIKMISS--PVTTVVTGLAASMGSVLSLCAAPGRRFATPH 111 Query: 127 SLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + + SIG + L + + + + + E ++ ++++ + Sbjct: 112 ARIMIHQPSIG-----GTITGQATDLDIHAREILKTK-ARIIDVYVEATGQSREVIEKAI 165 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D R++ W + EA + GL+D + Sbjct: 166 D-------------RDM-------------WMSANEAMEFGLLDGI 185 >gi|261837975|gb|ACX97741.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 51] Length = 196 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 30 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + + S + + + + Sbjct: 89 -VSTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA------- 134 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++++ + + +++++ ++ +D + + Sbjct: 135 -----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMS 177 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 178 AKEAKEYGLIDKV 190 >gi|37527729|ref|NP_931074.1| ATP-dependent Clp protease proteolytic subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|60389709|sp|Q7N0L3|CLPP_PHOLL RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|36787165|emb|CAE16241.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 207 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 43/201 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + + ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLVAAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T A S +L++ + + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGAKGKRICLPNSRV------MIHQPLGGFQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ P ++ ++ R Sbjct: 154 QEIL----------------KVKSRMNELM-----------AKHTGRPIEEIAKDTERDR 186 Query: 212 IWTGAEAKKVGLIDVVGGQEE 232 + EA + GL+D + + Sbjct: 187 FLSADEAVEYGLVDKIFTHRD 207 >gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia hofstadii F0254] gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia hofstadii F0254] Length = 208 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 72/195 (36%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G++ED + ++ ++ + D+ +++ ++SPGG AG AI+ ++ +K+ Sbjct: 47 IIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPGGVITAGLAIYDTMRHIKSD- 105 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS L++ + + S + + + + Sbjct: 106 -VSTVCVGQAASMGAVLLAAGAKGKRYSLPNSR------IMIHQPLGGARGQA------- 151 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR---I 212 +Q+ ++ +++SE+ ++ +D Sbjct: 152 -----------------TDIQIQAKEIERMKEITSKILSEATGKSVEEI--YADTERDNF 192 Query: 213 WTGAEAKKVGLIDVV 227 + EA GLID + Sbjct: 193 MSPEEAVNYGLIDKI 207 >gi|188527362|ref|YP_001910049.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori Shi470] gi|217034159|ref|ZP_03439579.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10] gi|308182950|ref|YP_003927077.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori PeCan4] gi|226706455|sp|B2UT37|CLPP_HELPS RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|188143602|gb|ACD48019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori Shi470] gi|216943443|gb|EEC22899.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10] gi|261839391|gb|ACX99156.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 52] gi|297379992|gb|ADI34879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter pylori v225d] gi|308062114|gb|ADO04002.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori Cuz20] gi|308063422|gb|ADO05309.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori Sat464] gi|308065135|gb|ADO07027.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori PeCan4] gi|315586542|gb|ADU40923.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori 35A] gi|317177376|dbj|BAJ55165.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori F16] gi|317180557|dbj|BAJ58343.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori F32] gi|317182104|dbj|BAJ59888.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori F57] Length = 195 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G+I DS ++ ++ + +D + + ++SPGG +G +I+ + ++ Sbjct: 29 IVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS +L+SC + + S + + + + Sbjct: 88 -VSTICIGQAASMGAFLLSCGAKGKRFSLPHSR------IMIHQPLGGAQGQA------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 ++++ + + +++++ ++ +D + + Sbjct: 134 -----------------SDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMS 176 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID V Sbjct: 177 AKEAKEYGLIDKV 189 >gi|259909254|ref|YP_002649610.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae Ep1/96] gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae Ep1/96] Length = 207 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS- 151 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIDIHA 153 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K+ QMM +++ + + N R Sbjct: 154 REIIKT-----------------KQMMNELMAKHTGQTIETIERDTNRD----------R 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +E+ + GL+D V Sbjct: 187 FLSASESVEYGLVDSV 202 >gi|254423153|ref|ZP_05036871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus sp. PCC 7335] gi|196190642|gb|EDX85606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus sp. PCC 7335] Length = 201 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 77/192 (40%), Gaps = 35/192 (18%) Query: 40 RIAIRGQI-EDSQELI-ERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ DS LI ++ + +D + + ++SPGGS AG ++ + ++ Sbjct: 27 IIFLHGQVTADSMNLIVAQMLFLEAEDPEKDIYLYINSPGGSVSAGLGLYDTMNHIRPD- 85 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 V T +AAS +L+S + G P + + + Sbjct: 86 -VATICMGLAASMGAFLLSAGAK-------------GKRMILPNGRVMIHQP-------- 123 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + + E+ K + ++ +++ +++ P +K ++ + + Sbjct: 124 SGGAQGQATDI-EIQAKEILYLKTMLNE-------ALAKHTGQPLEKIKEDTERDFFMSP 175 Query: 216 AEAKKVGLIDVV 227 EA + GL+D V Sbjct: 176 QEAMEYGLVDQV 187 >gi|271968525|ref|YP_003342721.1| endopeptidase Clp [Streptosporangium roseum DSM 43021] gi|270511700|gb|ACZ89978.1| Endopeptidase Clp [Streptosporangium roseum DSM 43021] Length = 214 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 35/181 (19%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + + + ++ DD + + ++SPGGS AG AI+ ++ V N V T +AAS Sbjct: 52 ANRICAELLLLAADDPDRDIWLYINSPGGSVTAGMAIYDMMEYVPNN--VCTVAMGLAAS 109 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPF 167 G + CA A + + + +PS Sbjct: 110 MGQFLLCAGEKGKRYALPHAR------IMMH------------------------QPSGG 139 Query: 168 SEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAEAKKVGLIDV 226 + + + + ++ P D+ SD R +T EAK G ID Sbjct: 140 IGGTAADIAIQAEQMLYVKKTLAERIAFHTGQPLDQIEADSDRDRWFTAEEAKDYGFIDQ 199 Query: 227 V 227 V Sbjct: 200 V 200 >gi|318060124|ref|ZP_07978847.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces sp. SA3_actG] Length = 201 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 48/187 (25%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + ++ ++ ++ D S + + ++SPGGS AG AI+ +Q + N VIT MAAS Sbjct: 39 ANKITAQMLLLAADPS-KDIYLYINSPGGSVTAGMAIYDTMQYIPND--VITIGMGMAAS 95 Query: 110 AGYLISCASN--IIVAAETSLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAE 163 G + A + + GS G+ Sbjct: 96 MGQFLLTGGTPGKRFALPNTDILMHQGSAGIGG--------------------------- 128 Query: 164 PSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG---RIWTGAEAKK 220 +++ + + + + + + +K + DG R +T EAK Sbjct: 129 -------TASDIKIQAEYLLRTKNRMAEITARHSGQTIEKI--IRDGDRDRWFTAEEAKD 179 Query: 221 VGLIDVV 227 GLID + Sbjct: 180 YGLIDEI 186 >gi|188534634|ref|YP_001908431.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia tasmaniensis Et1/99] gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia tasmaniensis Et1/99] Length = 207 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS- 151 V T A S +L++ + S V + + + + Sbjct: 101 -VSTICMGQACSMGAFLLTAGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIDIHA 153 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K+ QMM +++ + + N R Sbjct: 154 REIIKT-----------------KQMMNELMAKHTGQTIETIERDTNRD----------R 186 Query: 212 IWTGAEAKKVGLIDVV 227 + +E+ + GL+D V Sbjct: 187 FLSASESVEYGLVDSV 202 >gi|110680063|ref|YP_683070.1| ATP-dependent Clp protease proteolytic subunit [Roseobacter denitrificans OCh 114] gi|116243162|sp|Q165F9|CLPP_ROSDO RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|109456179|gb|ABG32384.1| Clp protease, putative [Roseobacter denitrificans OCh 114] Length = 208 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 33/191 (17%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ A + + ++SPGG +G +I+ +Q +K + Sbjct: 37 IIFLNGPVHDGMSSLIVAQLLHLEAENPAKEISMYINSPGGVVTSGLSIYDTMQYIKPK- 95 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V AAS G L+ A G+ F P + + + S Sbjct: 96 -VSTLVIGQAASMGSLLLTAGEA------------GMRFSLPNSRVMVHQP--------S 134 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDK-TLVLSDGRIWTGA 216 + + + ++ Q ++D ++ Y + K L + Sbjct: 135 GGYQGQATDI-MIHAAETQKLKDRLNEIY-------VKHTGQTMKKVVDALERDNFMSPE 186 Query: 217 EAKKVGLIDVV 227 EAK+ GLID + Sbjct: 187 EAKEFGLIDEI 197 >gi|50843047|ref|YP_056274.1| ATP-dependent Clp protease proteolytic subunit 1 [Propionibacterium acnes KPA171202] gi|282854724|ref|ZP_06264059.1| Clp protease [Propionibacterium acnes J139] gi|67460472|sp|Q6A7E9|CLPP2_PROAC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|50840649|gb|AAT83316.1| ATP-dependent Clp protease proteolytic subunit 1 [Propionibacterium acnes KPA171202] gi|282582306|gb|EFB87688.1| Clp protease [Propionibacterium acnes J139] gi|332675999|gb|AEE72815.1| ATP-dependent Clp protease proteolytic subunit 2 [Propionibacterium acnes 266] Length = 212 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ L ++ ++ +D + + ++SPGGS G AI+ +Q + N V T MA Sbjct: 48 ENANALCAQMLLLNAEDPEADIYLYINSPGGSVTGGMAIYDTMQWISND--VATVTMGMA 105 Query: 108 ASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + A A + + + P+ Sbjct: 106 ASMGQFLLTAGTPGKRYALPHAK------ILMHQ-------------------PLGGVGG 140 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 + + ++ + +L ++ ++ L SD W T EA + GLI Sbjct: 141 -----TATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLI 195 Query: 225 DVV 227 D V Sbjct: 196 DHV 198 >gi|13476994|ref|NP_108564.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium loti MAFF303099] gi|18202642|sp|Q982V6|CLPP2_RHILO RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; AltName: Full=Endopeptidase Clp 2 gi|14027757|dbj|BAB54350.1| ATP-dependent Clp proteinase [Mesorhizobium loti MAFF303099] Length = 209 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 37/205 (18%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I I G +ED + ++ + ++ + + ++SPGG +G AI+ +Q +K Sbjct: 37 IIFITGPVEDGMATLVCAQLLFLEAENPKKEINLYINSPGGVVTSGMAIYDTMQFIKPA- 95 Query: 98 PVITEVHEMAASAGYLISCAS--NIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ A ++ A + + + Sbjct: 96 -VSTLCIGQAASMGSLLLTAGHKDMRFATPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + ++ ++ Y + Y++ D + T Sbjct: 133 PSGGFQGQASDI-ERHAMDIVKLKRRLNEVY-------VKHTGKSYEEIERTLDRDHFMT 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA 239 EAK GLID V E +S A Sbjct: 185 ADEAKDFGLIDKVISSREPAESAVA 209 >gi|19553610|ref|NP_601612.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glutamicum ATCC 13032] gi|62391254|ref|YP_226656.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glutamicum ATCC 13032] gi|145296394|ref|YP_001139215.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium glutamicum R] gi|41326594|emb|CAF21076.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1 [Corynebacterium glutamicum ATCC 13032] gi|140846314|dbj|BAF55313.1| hypothetical protein [Corynebacterium glutamicum R] Length = 197 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 39/188 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + +L +I +S +D + + ++SPGGS AG AI+ ++ + T +AAS Sbjct: 39 ANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKYSPCD--IATYGMGLAAS 96 Query: 110 AGYLISCASN--IIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVSIKSVKSSPMKAEP 164 G + A + + + V + + + ++ Sbjct: 97 MGQFLLSGGTKGKRFALPHAR------IMMHQPSAGVGGTAADIAIQAEQFAATK----- 145 Query: 165 SPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLI 224 +M Q + + + F + I D R +T EAK GL+ Sbjct: 146 ----------REMAQLIAEHTGQTFEQ-------ISKDSDRD----RWFTAQEAKDYGLV 184 Query: 225 DVVGGQEE 232 D V E Sbjct: 185 DHVITLAE 192 >gi|220927070|ref|YP_002502372.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060] gi|219951677|gb|ACL62069.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060] Length = 237 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 68/207 (32%), Gaps = 37/207 (17%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 D+Q + + I A + + L+SPGG +A A+ A+++ K + V+ + +AA Sbjct: 45 DAQTFVRELAAIE----AGTIHLRLNSPGGDVFAARAMKTALEQHKAK--VVAHIDGVAA 98 Query: 109 SAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFS 168 SA + A++ I A+ + V + L + M+A Sbjct: 99 SAASFLMLAADEIAIADGAFV------MIHEPWSLALG---------TADEMRASADLLD 143 Query: 169 EVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 +V Q ++ W + EA + G D Sbjct: 144 KVGEAIAADYQ---------------RRTGKSAEEVAAWMKAETWFSADEAIENGFADRK 188 Query: 228 GGQEEVWQSLYALGVDQSIRKIKDWNP 254 + V + + R + + P Sbjct: 189 AEKAAVANAFDLTAFRNAPRALLERAP 215 >gi|255645951|gb|ACU23464.1| unknown [Glycine max] Length = 304 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 84/220 (38%), Gaps = 48/220 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I G ++D + ++ ++ + D +++ ++SPGGS AG AIF ++ ++ Sbjct: 121 IIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPD- 179 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T +AAS +L+S + + S + + + + G + + Sbjct: 180 -VSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR------IMIHQPLGG--AQGGQTDIDI 230 Query: 156 KSSP---MKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 +++ KA + + ++ DK +D Sbjct: 231 QANEMLHHKANLNGY-------------------------LAYHTGQSLDKINQDTDRDF 265 Query: 213 W-TGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKD 251 + + EAK+ GLID V + L AL ++ + KD Sbjct: 266 FMSAKEAKEYGLIDGV-----IMNPLKALQPLEAAAEGKD 300 >gi|113867496|ref|YP_725985.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha H16] gi|194289504|ref|YP_002005411.1| ATP-dependent clp protease proteolytic subunit [Cupriavidus taiwanensis LMG 19424] gi|123033071|sp|Q0KBK4|CLPP_RALEH RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|226706449|sp|B3R4W1|CLPP_CUPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|113526272|emb|CAJ92617.1| Endopeptidase Clp (type 1) [Ralstonia eutropha H16] gi|193223339|emb|CAQ69344.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease [Cupriavidus taiwanensis LMG 19424] Length = 216 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 41/195 (21%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D ++ ++ + ++ + + ++SPGGS AG AI+ +Q +K Sbjct: 51 VVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPD- 109 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T MAAS +L++ + A S + + + + + Sbjct: 110 -VSTLCMGMAASMGAFLLAAGAKGKRSALPNSR------IMIHQPLGGARGQASDIEIQA 162 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRI 212 + + + + ++ V ++ R+ D Sbjct: 163 REILY----------------LRERLNTILSEVTGQPVEKIA--RDTDRDN--------F 196 Query: 213 WTGAEAKKVGLIDVV 227 +G +A GLID V Sbjct: 197 MSGDQAVDYGLIDKV 211 >gi|46446077|ref|YP_007442.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Protochlamydia amoebophila UWE25] gi|67460481|sp|Q6ME32|CLPP1_PARUW RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|46399718|emb|CAF23167.1| probable ATP-dependent Clp protease proteolytic subunit [Candidatus Protochlamydia amoebophila UWE25] Length = 206 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 34/190 (17%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 + E+I ++ + D ++ ++SPGG+ +G AI+ I+ + + PV T V +A Sbjct: 44 GSASEIIRKLWYLELTDPGKPILFVINSPGGAVDSGFAIWDQIKMITS--PVTTLVTGLA 101 Query: 108 ASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G ++S ++ A S + + + + S +K + + Sbjct: 102 ASMGSILSLCASPGRRFATPHSR------IMIH--------------QPLLSGVIKGQAT 141 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 + ++ +++ Y ++ + D W T EA + GL+ Sbjct: 142 DLEIQAKEMLKTRNGLIE-IY-------VQATGKNFAAIEKAIDRDTWMTAQEALEFGLL 193 Query: 225 DV-VGGQEEV 233 D + EE+ Sbjct: 194 DKVINSFEEI 203 >gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp. Ejp617] Length = 215 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 50 IIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPD- 108 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVS- 151 V T A S +L++ + S V + + + + Sbjct: 109 -VSTICMGQACSMGAFLLTAGAKGKRYCLPNSRV------MIHQPLGGFQGQASDIDIHA 161 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR 211 + +K+ QMM +++ + + N R Sbjct: 162 REIIKT-----------------KQMMNELMAKHTGQTIETIERDTNRD----------R 194 Query: 212 IWTGAEAKKVGLIDVV 227 + +E+ + GL+D V Sbjct: 195 FLSASESVEYGLVDSV 210 >gi|282889717|ref|ZP_06298256.1| hypothetical protein pah_c004o068 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500291|gb|EFB42571.1| hypothetical protein pah_c004o068 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 753 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNR--KPVITEVHEMAASAGYLISCASNIIVAAET 126 +I+ L++PGG +A + I A++++ + PVI ++ A SAG +++ + I + Sbjct: 304 IILELNTPGGEVFAAQKISDALKEMDTQFGIPVIAYINNWAISAGAMLAYSCRYITVVKD 363 Query: 127 SLVGSIG 133 GS+G Sbjct: 364 ---GSMG 367 >gi|295109356|emb|CBL23309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus obeum A2-162] Length = 193 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 35/182 (19%) Query: 49 DSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAA 108 + ++ ++ + +D + + + ++SPGGS AG AI+ ++ +K V T MAA Sbjct: 40 SASIIVAQLLFLEAEDPSKDIQLYINSPGGSVTAGMAIYDTMKYIKCD--VSTICLGMAA 97 Query: 109 S-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSP 166 S +L++ + A S + + +PS Sbjct: 98 SMGAFLLAGGTKGKRYALPHS------TIMIH------------------------QPSG 127 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLID 225 ++ +Q++ D + + +++E+ PY+ +D + T EAK GLID Sbjct: 128 GAQGQATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEAKAYGLID 187 Query: 226 VV 227 V Sbjct: 188 GV 189 >gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus brevis NBRC 100599] gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus brevis NBRC 100599] Length = 198 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 40/199 (20%) Query: 40 RIAIRGQ-IED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI G I D + ++ ++ + +D + + ++SPGGS AG AI+ + +K Sbjct: 28 RIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGMAIYDTMHFIKPD 87 Query: 97 KPVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 V T MAAS +L++ + A S V + + + Sbjct: 88 --VSTICIGMAASMGAFLLAAGAKGKRFALPNSEV------MIHQPLGGAQGQA------ 133 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGR--I 212 +++ + +++E P ++ +D R Sbjct: 134 ------------------SDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTD-RDNF 174 Query: 213 WTGAEAKKVGLIDVVGGQE 231 + AEA + GLID V E Sbjct: 175 LSAAEAVEYGLIDKVITSE 193 >gi|157370220|ref|YP_001478209.1| ATP-dependent Clp protease proteolytic subunit [Serratia proteamaculans 568] gi|157321984|gb|ABV41081.1| Endopeptidase Clp [Serratia proteamaculans 568] Length = 197 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 66/192 (34%), Gaps = 35/192 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 + + G++ D ++ L ++ + ++ + + ++SPGG +G AI+ + + Sbjct: 33 IVFLNGEVNDQIAEVLCAQLLFLEAENPEKPIHLYINSPGGVITSGFAIYDTMNYINA-- 90 Query: 98 PVITEVHEMAASAG--YLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 PV T A S G L++ + + + S+ V + + + + + Sbjct: 91 PVHTLCMGTARSMGSFLLMAGEAGHRMVLPNA---SLHVHQPLGGFQGQASDILIHAEEM 147 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTG 215 K + + SY R + D + Sbjct: 148 KRTKHSVIT------------LYAKHCGRSYEEV------ERALDRD--------HFMSA 181 Query: 216 AEAKKVGLIDVV 227 EA + GL+D V Sbjct: 182 DEAVEWGLVDKV 193 >gi|325292625|ref|YP_004278489.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp. H13-3] gi|325060478|gb|ADY64169.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp. H13-3] Length = 210 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 72/205 (35%), Gaps = 37/205 (18%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G +ED + + ++ + ++ + + ++SPGG AG AI+ +Q ++ Sbjct: 37 IIFLTGPVEDQMASLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIRPA- 95 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T AAS G L+ A A + + + Sbjct: 96 -VSTLCVGQAASMGSLLLAAGEKGMRFATPNAR------IMVHQ---------------- 132 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-T 214 S + + S E + + + M+ ++ Y + ++ D + Sbjct: 133 PSGGFQGQASDI-ERHARDIIKMKRRLNEVY-------VKHTGRTLEEVEKTLDRDHFMD 184 Query: 215 GAEAKKVGLIDVVGGQEEVWQSLYA 239 EAK G+ID + + + A Sbjct: 185 ADEAKDWGVIDKILTSRQEMEGAAA 209 >gi|323139239|ref|ZP_08074294.1| hypothetical protein Met49242DRAFT_3682 [Methylocystis sp. ATCC 49242] gi|322395537|gb|EFX98083.1| hypothetical protein Met49242DRAFT_3682 [Methylocystis sp. ATCC 49242] Length = 273 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 47 IEDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEM 106 + DS+E++ I+ D + AL + L +PGG A I RA+ K + V V Sbjct: 67 MNDSEEVLRAIQ--LTDPNM-ALDIVLHTPGGLYLAATQIARALGGHKGK--VTVFVPHY 121 Query: 107 AASAGYLISCASNIIVAAETSLVG 130 A S G LI+ A++ I+ S++G Sbjct: 122 AMSGGTLIALAADEIMMCPHSVLG 145 >gi|254460423|ref|ZP_05073839.1| Clp protease [Rhodobacterales bacterium HTCC2083] gi|206677012|gb|EDZ41499.1| Clp protease [Rhodobacteraceae bacterium HTCC2083] Length = 210 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 37/193 (19%) Query: 40 RIAIRGQIEDSQE--LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G + D ++ ++ + ++ + + + ++SPGG +G +I+ +Q ++ + Sbjct: 38 IIFLNGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIRPK- 96 Query: 98 PVITEVHEMAASAGYLISCASNI--IVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSV 155 V T V AAS G L+ A + S V + Sbjct: 97 -VSTLVIGQAASMGSLLLTAGEKDMRFSLPNSRV------MVHQ---------------- 133 Query: 156 KSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTL-VLSDGRIWT 214 S + + + ++ + Q ++ ++ Y + K L + Sbjct: 134 PSGGYQGQATDI-MIHAQETQKLKTRLNEIY-------VQHTGQTLKKVEAALERDNFMS 185 Query: 215 GAEAKKVGLIDVV 227 EAK+ GLID + Sbjct: 186 PEEAKEFGLIDEI 198 >gi|311280666|ref|YP_003942897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter cloacae SCF1] gi|308749861|gb|ADO49613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter cloacae SCF1] Length = 207 Score = 56.3 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 43/196 (21%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + GQ+ED + ++ ++ + ++ + + ++SPGG AG +I+ +Q +K Sbjct: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD- 100 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSI 152 V T AAS +L++ + S V + + + + Sbjct: 101 -VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV------MIHQPLGGYQGQATDIEIHA 153 Query: 153 KSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GR 211 + + K M +++ ++ + ++ R Sbjct: 154 REIL----------------KVKARMNELM-----------AQHTGQSLAQIESDTERDR 186 Query: 212 IWTGAEAKKVGLIDVV 227 + EA + GL+D + Sbjct: 187 FLSAPEAVEYGLVDSI 202 >gi|15835330|ref|NP_297089.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum Nigg] gi|7190745|gb|AAF39527.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydia muridarum Nigg] Length = 196 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 41/166 (24%) Query: 69 LIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AGYLISCAS-NIIVAAET 126 ++ ++SPGGS AG A++ I+ + + PV T V +AAS L CA+ A Sbjct: 58 IVFVINSPGGSVDAGFAVWDQIKMISS--PVTTVVTGLAASMGSVLSLCAAPGRRFATPH 115 Query: 127 SLV----GSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVV 182 + + SIG + L + + + + + E ++ ++++ + Sbjct: 116 ARIMIHQPSIG-----GTITGQATDLDIHAREILKTK-ARIIDVYVEATGQSREVIEKAI 169 Query: 183 DSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 D R++ W + EA + GL+D + Sbjct: 170 D-------------RDM-------------WMSANEAMEFGLLDGI 189 >gi|330837420|ref|YP_004412061.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta coccoides DSM 17374] gi|329749323|gb|AEC02679.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta coccoides DSM 17374] Length = 246 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 75/192 (39%), Gaps = 37/192 (19%) Query: 41 IAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G+I+ + LI ++ + +D + + ++SPGG AG AI+ I+ V P Sbjct: 80 ILLSGEIDKECADRLIRQLLVMEAEDGDAPVYLYINSPGGDVDAGYAIYDMIRFVSC--P 137 Query: 99 VITEVHEMAASAGYLI--SCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 + + ASA LI S ++ V S Y +P GV+ Sbjct: 138 ITIIGMGLVASAAALILLSVPADRRVGLPDS---------TYLIHQPLSGMKGVATDI-- 186 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWT-G 215 E++ + ++ ++ +D +++ + ++ ++ W Sbjct: 187 ------------EIHARQIEKLRAKLD-------GVIAAATGKSVEEVAEDTERDHWLDA 227 Query: 216 AEAKKVGLIDVV 227 EA+ GLI + Sbjct: 228 GEARDYGLISRI 239 >gi|327398620|ref|YP_004339489.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM 10411] gi|327181249|gb|AEA33430.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM 10411] Length = 205 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 6/94 (6%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D S ++ ++ + +D + + ++SPGGS AG AI+ +Q +K Sbjct: 29 IIMLNGEINDDVSNVIVSQLLFLESEDPEKDIFLYINSPGGSVTAGLAIYDTMQYIKCD- 87 Query: 98 PVITEVHEMAAS-AGYLISCASN-IIVAAETSLV 129 V T AAS L++ + + S + Sbjct: 88 -VTTICIGSAASMGALLLASGTKGKRYSLPHSRI 120 >gi|92117911|ref|YP_577640.1| peptidase S14, ClpP [Nitrobacter hamburgensis X14] gi|91800805|gb|ABE63180.1| peptidase S14, ClpP [Nitrobacter hamburgensis X14] Length = 351 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 36/174 (20%) Query: 50 SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS 109 + E++ + RD+ T V L+S GG AI+ A+ K + V +V +AAS Sbjct: 26 ASEVLAALAEHGRDNDLT---VRLNSGGGIVNDAIAIYNALSTHKGK--VTIQVDAIAAS 80 Query: 110 AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSE 169 A +I+ A IV VGSI + + +V ++ E Sbjct: 81 AATVIAMAGQEIVMR----VGSI--MMIH------------DPMNVTFGNIED-----HE 117 Query: 170 VNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVG 222 + + + + S Y +E D IW T +A + G Sbjct: 118 KTIEQLTAYANQMASIY-------AERSGNELDDVRSDMKAEIWLTAEQAVEKG 164 >gi|42527179|ref|NP_972277.1| ATP-dependent Clp protease proteolytic subunit [Treponema denticola ATCC 35405] gi|67460504|sp|Q73M38|CLPP1_TREDE RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|41817603|gb|AAS12188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema denticola ATCC 35405] Length = 197 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 6/94 (6%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+I D + ++ ++ + + + + ++SPGGS AG AI+ +Q ++ Sbjct: 30 IIFVDGEINDMSADLVVAQLLFLEAQNPDKDISLYINSPGGSVTAGLAIYDTMQHIRPD- 88 Query: 98 PVITEVHEMAAS-AGYLISCAS-NIIVAAETSLV 129 V T AS L++ + N A +S V Sbjct: 89 -VQTICLGQCASMGAVLLAGGAKNKRYALPSSRV 121 >gi|298387203|ref|ZP_06996756.1| ATP-dependent Clp protease [Bacteroides sp. 1_1_14] gi|298259872|gb|EFI02743.1| ATP-dependent Clp protease [Bacteroides sp. 1_1_14] Length = 353 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 42/244 (17%) Query: 39 ARIAIRGQI----EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVK 94 ARI ++G I E E ++E + + + + ++SPGG + I I+K Sbjct: 12 ARIELKGTISKWRETEAEFTSKVEELIK-SGIKDVHIYINSPGGECFEANEIVNVIKKFP 70 Query: 95 NRKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKS 154 + + E + ASA I+ G+ + Sbjct: 71 GK--ITGEGGALVASAATYIAINCTSFSMPAN------GLFMIH---------------Q 107 Query: 155 VKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW- 213 V +++M+ + + + F+ ++ + I G W Sbjct: 108 VSGGACGRVADI-----ESTLEVMRKLNEHYLNAFLSKCTDKKKIR----DAWEKGDYWM 158 Query: 214 TGAEAKKVGLIDVVGGQEEVWQSLYAL----GVDQSIRKIKDWNPPKNYWFCDLKNLSIS 269 + EAK+ G + V G+ +V ++ + G I N K+ DL L+ Sbjct: 159 SAQEAKENGFVTEVTGKAKVDKATAQMITNCGYTGEIEITDSINNEKSKNDMDLTMLTTR 218 Query: 270 SLLE 273 ++ Sbjct: 219 FGMD 222 >gi|189200839|ref|XP_001936756.1| ATP-dependent Clp protease proteolytic subunit 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983855|gb|EDU49343.1| ATP-dependent Clp protease proteolytic subunit 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 244 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 78/192 (40%), Gaps = 33/192 (17%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G+++D S + ++ + D+ + + ++SPGGS AG AI+ + +K+ Sbjct: 68 IICLNGEVDDFMSANAVAQLLFLEADNPEKPISMYINSPGGSVSAGLAIYDTMNYIKS-- 125 Query: 98 PVITEVHEMAAS-AGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVK 156 PV T +AAS L++ + G + P+ + + + Sbjct: 126 PVSTICMGIAASMGSLLLAGGAE-------------GQRYILPHARVMIHQP-------- 164 Query: 157 SSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TG 215 S + + S ++ + K + ++D ++ Y + ++ + + Sbjct: 165 SGGYRGKASDIAD-HAKEILRIRDKLNRIYQSHLTT-----KRSLEEIEKYMERDYYMDA 218 Query: 216 AEAKKVGLIDVV 227 EA + G++D + Sbjct: 219 QEAVEFGIVDKI 230 >gi|29827687|ref|NP_822321.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces avermitilis MA-4680] gi|67460536|sp|Q82NZ4|CLPP1_STRAW RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; AltName: Full=Endopeptidase Clp 1 gi|29604787|dbj|BAC68856.1| putative ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces avermitilis MA-4680] Length = 217 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 78/206 (37%), Gaps = 49/206 (23%) Query: 40 RIAIRGQIED---SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNR 96 RI + G D + + ++ +S +DS T + + ++SPGGS AG AI+ ++ + N Sbjct: 38 RIVLLGTQVDEVSANRVCAQLLLLSAEDSRTDISLYINSPGGSVTAGLAIYDTMRLIPND 97 Query: 97 KPVITEVHEMAASAGYLISC--ASNIIVAAETSLVGSIGVLFQY---PYVKPFLDKLGVS 151 V T AAS G + A+ A + + + + + + Sbjct: 98 --VSTLAMGFAASMGQFLLSVGAAGKRFALPNAR------IMMHQPSAGIGGTTADIEIQ 149 Query: 152 IKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDG- 210 +++ E KA++ + +E + DG Sbjct: 150 AENL-------------EFTKKAIERIT--------------AEHTGQSEETISR--DGD 180 Query: 211 --RIWTGAEAKKVGLIDV-VGGQEEV 233 R +T +AK+ G++D V ++V Sbjct: 181 RDRWFTAEQAKEYGMVDRVVESLDDV 206 >gi|55820449|ref|YP_138891.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus thermophilus LMG 18311] gi|55822333|ref|YP_140774.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus thermophilus CNRZ1066] gi|116627271|ref|YP_819890.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus thermophilus LMD-9] gi|67460179|sp|Q5M1A8|CLPP_STRT1 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|67460181|sp|Q5M5U4|CLPP_STRT2 RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|122268126|sp|Q03M78|CLPP_STRTD RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gi|55736434|gb|AAV60076.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus thermophilus LMG 18311] gi|55738318|gb|AAV61959.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus thermophilus CNRZ1066] gi|116100548|gb|ABJ65694.1| ATP-dependent Clp protease proteolytic subunit ClpP [Streptococcus thermophilus LMD-9] gi|312277759|gb|ADQ62416.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus thermophilus ND03] Length = 196 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 75/193 (38%), Gaps = 31/193 (16%) Query: 40 RIAIRGQIED--SQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRK 97 I + G IED + +I ++ + D+ + + +++PGGS AG AI + +K+ Sbjct: 27 IIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSD- 85 Query: 98 PVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKS 157 V T V MAAS G +I+ + G F P + + + Sbjct: 86 -VQTIVMGMAASMGTIIASSGTK------------GKRFMLPNAEYMIHQP--------- 123 Query: 158 SPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGA 216 + + + + + + ++++++ P +K V ++ W + Sbjct: 124 -----MGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQPIEKVHVDAERDNWMSAQ 178 Query: 217 EAKKVGLIDVVGG 229 E + G ID + Sbjct: 179 ETLEYGFIDEIMT 191 >gi|326790230|ref|YP_004308051.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium lentocellum DSM 5427] gi|326540994|gb|ADZ82853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium lentocellum DSM 5427] Length = 193 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 41/181 (22%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + +D ++ ++SPGGS G AI+ +Q +K V T MAAS Sbjct: 44 IVAQLLFLEAEDPDKDIMFYINSPGGSITDGMAIYDTMQYIKCD--VSTICMGMAASMGA 101 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYP---YVKPFLDKLGVSIK-SVKSSPMKAEPSP 166 +L++ + A + V + K + ++ + +K+ Sbjct: 102 FLLAGGTKGKRFALPNAEV------MIHQPLGGAKGQATDIQITAQHIIKTKE--RMNRM 153 Query: 167 FSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIWTGAEAKKVGLIDV 226 SE + ++ + + V+ T EAK+ GLID Sbjct: 154 LSEFTGQPIERINNDVERDNWK-------------------------TAEEAKEYGLIDD 188 Query: 227 V 227 + Sbjct: 189 I 189 >gi|160945107|ref|ZP_02092333.1| hypothetical protein FAEPRAM212_02626 [Faecalibacterium prausnitzii M21/2] gi|158442838|gb|EDP19843.1| hypothetical protein FAEPRAM212_02626 [Faecalibacterium prausnitzii M21/2] Length = 229 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 30/178 (16%) Query: 53 LIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMAAS-AG 111 ++ ++ + D + + ++SPGGS AG AI +Q +K V T MAAS Sbjct: 75 VVAQLLYLEGQDPDKDISLYINSPGGSISAGMAIHDTMQYIKCD--VSTICMGMAASMGA 132 Query: 112 YLISCASN-IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEV 170 +L++ + A + + + L S +++ +K + Sbjct: 133 FLLASGTKGKRFALPNAEI----------MIHQPLIGGQGGGLSGQTTDIK--------I 174 Query: 171 NPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLIDVV 227 + + + ++D ++ +SE P +K ++ + T +AK+ GLID V Sbjct: 175 HAEHMVYIRDKMNRM-------LSEYTGQPLEKIQQDTERDNYLTAQQAKEYGLIDEV 225 >gi|314974115|gb|EFT18211.1| Clp protease [Propionibacterium acnes HL053PA1] Length = 201 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 35/183 (19%) Query: 48 EDSQELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKPVITEVHEMA 107 E++ L ++ ++ +D + + ++SPGGS G AI+ +Q + N V T MA Sbjct: 37 ENANALCAQMLLLNAEDPEADIYLYINSPGGSVTGGMAIYDTMQWISND--VATVTMGMA 94 Query: 108 ASAGYLISCASN--IIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSSPMKAEPS 165 AS G + A A + + + P+ Sbjct: 95 ASMGQFLLTAGTPGKRYALPHAK------ILMHQ-------------------PLGGVGG 129 Query: 166 PFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSDGRIW-TGAEAKKVGLI 224 + + ++ + +L ++ ++ L SD W T EA + GLI Sbjct: 130 -----TATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLI 184 Query: 225 DVV 227 D V Sbjct: 185 DHV 187 >gi|229494686|ref|ZP_04388444.1| Clp protease [Rhodococcus erythropolis SK121] gi|229318353|gb|EEN84216.1| Clp protease [Rhodococcus erythropolis SK121] Length = 202 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 77/190 (40%), Gaps = 33/190 (17%) Query: 41 IAIRGQIEDS--QELIERIERISRDDSATALIVSLSSPGGSAYAGEAIFRAIQKVKNRKP 98 I + G++ D+ + + + ++ D +++ ++SPGGS +AG AI+ ++ + N Sbjct: 25 ILLTGEVNDAMAERVCSELVLLATTDPKRDVVLYINSPGGSVFAGLAIYDTMKLIPND-- 82 Query: 99 VITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQYPYVKPFLDKLGVSIKSVKSS 158 V+T AAS G ++ C+ SL S + + G+ +V Sbjct: 83 VVTVAMGFAASMGQVLLCSGTH--GKRNSLAHS--RIMMH------QPSAGIGGTAV--- 129 Query: 159 PMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRNIPYDKTLVLSD-GRIWTGAE 217 + + + ++ +++ ++ SD R +T + Sbjct: 130 ---------------DIAIQAESLELMKRQSQEILAAETGRTVEEIETDSDRDRWFTAEQ 174 Query: 218 AKKVGLIDVV 227 A++ G++D V Sbjct: 175 AREYGIVDRV 184 >gi|224419236|ref|ZP_03657242.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter canadensis MIT 98-5491] gi|253826954|ref|ZP_04869839.1| ATP-dependent Clp