PSIBLAST alignment of GI: 254780747 and protein with PDB id: 3bez

>gi|163311059|pdb|3BEZ|A Chain A, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals Length = 593
>gi|163311060|pdb|3BEZ|B Chain B, Crystal Structure Of Escherichia Coli Signal Peptide Peptidase (Sppa), Semet Crystals Length = 593
 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 14/271 (5%)

Query: 29  SHVEDNSPHVARIAIRGQIEDSQEL---------IERIERISRDDSATALIVSLSSPGGS 79
               D    +  +   G I D +E            +I     D    A+++ ++SPGGS
Sbjct: 294 KTPADTGDSIGVVFANGAIXDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGS 353

Query: 80  AYAGEAIFRAIQKVKN-RKPVITEVHEMAASAGYLISCASNIIVAAETSLVGSIGVLFQY 138
             A E I   +   +   KPV+      AAS GY IS  +N IVA  ++L GSIG+    
Sbjct: 354 VTASEVIRAELAAARAAGKPVVVSXGGXAASGGYWISTPANYIVANPSTLTGSIGIFGVI 413

Query: 139 PYVKPFLDKLGVSIKSVKSSPMKAEPSPFSEVNPKAVQMMQDVVDSSYHWFVRLVSESRN 198
             V+  LD +GV    V +SP+    S    + P+A    Q  +++ Y  F+ LV+++R+
Sbjct: 414 TTVENSLDSIGVHTDGVSTSPLADV-SITRALPPEAQLXXQLSIENGYKRFITLVADARH 472

Query: 199 IPYDKTLVLSDGRIWTGAEAKKVGLIDVVGGQEEVWQSLYALGVDQSIRKIKDWNPPKNY 258
              ++   ++ G +WTG +AK  GL+D +G  ++       L        ++ +     +
Sbjct: 473 STPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKV-KQWHLEYYVDEPTF 531

Query: 259 WFCDLKNLSISSLLEDTIPLMKQTKVQGLWA 289
           +     N S S  +   +P   Q  +    A
Sbjct: 532 FDKVXDNXSGS--VRAXLPDAFQAXLPAPLA 560