HHsearch alignment of GI: 254780748 and MMDB domain: 1owf_A_42-99

>1owf_A (A:42-99) IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli}

Probab=99.54  E-value=4.2e-15  Score=117.17  Aligned_cols=56  Identities=30%  Similarity=0.608  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEECCCHHHHHHHCCCCCC
Q ss_conf             85120345788862146541025889888994687346762698999970786100
Q gi|254780748|r   41 GRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFFRAGKNLKERLNSPDST   96 (100)
Q Consensus        41 ~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~Fk~sk~lk~~iN~~~~~   96 (100)
                      ++|.|+|||+|+++.+++|.|+||+|||.|.||++++|+|+||+.|+++||+....
T Consensus         1 ekV~l~gfGtF~~~~r~~R~grNP~Tge~i~I~ak~~v~Fk~sk~Lk~~vn~~~~~   56 (58)
T 1owf_A            1 EQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPK   56 (58)
T ss_dssp             CCEEETTTEEEEEEEECCEEEECSSSCCEEEECCEEEEEEEECHHHHHHHHTCCCC
T ss_pred             CEEEECCEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHCCCCC
T ss_conf             97995113799998766821258899988995387228997499999998078968