HHsearch alignment of GI: 254780748 and MMDB domain: 2iie_A_

>2iie_A (A:) Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=99.87  E-value=1.4e-22  Score=164.58  Aligned_cols=92  Identities=30%  Similarity=0.578  Sum_probs=75.1

Q ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf             98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r    1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF   80 (100)
Q Consensus         1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F   80 (100)
                      |||+|||+.||+++ ++++++++.++|+|++.|.++|.+|+.|.|+|||+|+++.+++|.++||+|||.+.+|++++|+|
T Consensus        47 MtK~eLi~~ia~~~-glskk~a~~ii~~~~~~I~e~L~~g~~V~l~gfGtF~v~~r~~R~~rNP~Tge~i~i~~kk~vkF  125 (204)
T 2iie_A           47 LTKAEMSEYLFDKL-GLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTF  125 (204)
T ss_dssp             BCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHTTCEEEETTTEEEEEEEECCBCCBCTTTCCBCCBCCEEEEEE
T ss_pred             CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCEEE
T ss_conf             35999999999986-97999999999999999999996699256511589999876471123889998898648651799


Q ss_pred             CCCHHHHHHHCCC
Q ss_conf             2698999970786
Q gi|254780748|r   81 RAGKNLKERLNSP   93 (100)
Q Consensus        81 k~sk~lk~~iN~~   93 (100)
                      +||+.|+..+|..
T Consensus       126 k~~k~LK~iveaL  138 (204)
T 2iie_A          126 RPGQKLKSRVENA  138 (204)
T ss_dssp             EECHHHHHHHHHH
T ss_pred             EECHHHHHHHHCC
T ss_conf             9547999886413