HHsearch alignment of GI: 254780748 and MMDB domain: 2np2_A_53-108

>2np2_A (A:53-108) HBB; protein-DNA complex, DNA-binding protein, DNA-bending protein, dnabii family, HU/IHF family, DNA binding protein/DNA complex; 3.02A {Borrelia burgdorferi}

Probab=99.50  E-value=7.4e-15  Score=115.59  Aligned_cols=54  Identities=43%  Similarity=0.706  Sum_probs=51.5

Q ss_pred             CCCCCEEEEEEEEECCCCC-CEECCCCCCEEEECCCCEEEECCCHHHHHHHCCCC
Q ss_conf             8512034578886214654-10258898889946873467626989999707861
Q gi|254780748|r   41 GRVEIRGFGSFSVRKRAAR-LARAPLAQKVISVEEKMVPFFRAGKNLKERLNSPD   94 (100)
Q Consensus        41 ~~V~i~gfGtF~~~~~~~r-~~rNP~Tge~i~i~~~~~v~Fk~sk~lk~~iN~~~   94 (100)
                      ++|.|+|||+|+++.+++| .||||+|||.|.||++++|+|+||+.|+++||+..
T Consensus         1 d~V~l~gFGtF~~~~r~~R~~grNP~Tge~i~I~a~~v~~Fk~~k~lk~~vn~~~   55 (56)
T 2np2_A            1 NVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK   55 (56)
T ss_dssp             CEEEETTTEEEEEEEECCBSSCBCTTTCCBCCBCCEEEEEEEECHHHHHHHHSCC
T ss_pred             CEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHHCCC
T ss_conf             9699844689999730476555388999889853875678748989999970679