HHsearch results for GI: 254780748 and protein with PDBid: 1b8z_A
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=99.91 E-value=1e-24 Score=177.25 Aligned_cols=90 Identities=47% Similarity=0.707 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf 98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r 1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF 80 (100)
Q Consensus 1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F 80 (100)
|||+|||+.||+++ ++++++++.++|+|++.|.++|.+|++|+|+|||+|+++.+++|.||||+|||.++||++++|+|
T Consensus 1 MnK~eli~~ia~~~-~~s~~~~~~~v~~~~~~i~~~L~~~~~V~l~gfG~F~~~~~~~R~~rNP~Tge~~~ip~k~~v~F 79 (90)
T 1b8z_A 1 MNKKELIDRVAKKA-GAKKKDVKLILDTILETITEALAKGEKVQIVGFGSFEVRKAAARKGVNPQTRKPITIPERKVPKF 79 (90)
T ss_dssp CCHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEC-----------------------CCEE
T ss_pred CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEECCEEEECCCCCCEEEECCCCEEEE
T ss_conf 97899999999863-99999999999999999999997288776067169999875674405869998899648630899
Q ss_pred CCCHHHHHHHC
Q ss_conf 26989999707
Q gi|254780748|r 81 RAGKNLKERLN 91 (100)
Q Consensus 81 k~sk~lk~~iN 91 (100)
+||+.|+++|.
T Consensus 80 k~sk~lk~~ik 90 (90)
T 1b8z_A 80 KPGKALKEKVK 90 (90)
T ss_dssp EECHHHHHHHC
T ss_pred EECHHHHHHHC
T ss_conf 63999998639