HHsearch results for GI: 254780748 and protein with PDBid: 1owf_A
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_A 1ihf_A 1owg_A 2ht0_A
Probab=99.93 E-value=1.5e-25 Score=182.44 Aligned_cols=95 Identities=29% Similarity=0.563 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf 98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r 1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF 80 (100)
Q Consensus 1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F 80 (100)
|||+|||+.||+++ ++++++++.++|.|+++|.++|..|++|+|+|||+|+++.+++|.||||+|||.+.||++++|+|
T Consensus 3 mTK~eli~~ia~~~-~lsk~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~r~~r~~rNP~Tge~i~ip~k~~v~F 81 (99)
T 1owf_A 3 LTKAEMSEYLFDKL-GLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTF 81 (99)
T ss_dssp BCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEEEECCEEEECSSSCCEEEECCEEEEEE
T ss_pred CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCEEEECCCCCCEEEECCCCEEEE
T ss_conf 06999999999984-98999999999999999999997799799710789999877682026889998899638722999
Q ss_pred CCCHHHHHHHCCCCCC
Q ss_conf 2698999970786100
Q gi|254780748|r 81 RAGKNLKERLNSPDST 96 (100)
Q Consensus 81 k~sk~lk~~iN~~~~~ 96 (100)
+||+.|+++||+...+
T Consensus 82 k~sk~Lk~~vn~~~~~ 97 (99)
T 1owf_A 82 RPGQKLKSRVENASPK 97 (99)
T ss_dssp EECHHHHHHHHTCCCC
T ss_pred EECHHHHHHHCCCCCC
T ss_conf 7499999998088978