HHsearch results for GI: 254780748 and protein with PDBid: 2iie_A
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=99.92 E-value=1.6e-25 Score=182.27 Aligned_cols=95 Identities=29% Similarity=0.558 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf 98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r 1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF 80 (100)
Q Consensus 1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F 80 (100)
|||+|||+.||+++ ++++++++.++|+|+++|.++|.+|++|+|+|||+|+++.+++|.||||+|||.++||++++|+|
T Consensus 47 mTK~ELi~~Ia~~t-glSkkda~~ivd~f~d~I~e~L~~g~~V~L~gFGtF~vk~rkaR~grNPkTgE~i~IpakkvVkF 125 (204)
T 2iie_A 47 LTKAEMSEYLFDKL-GLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTF 125 (204)
T ss_dssp BCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHTTCEEEETTTEEEEEEEECCBCCBCTTTCCBCCBCCEEEEEE
T ss_pred CCHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCEEEECCCCCCEEEECCCCCEEE
T ss_conf 36999999999986-97999999999999999999986498698850578999887570105869998898548641798
Q ss_pred CCCHHHHHHHCCCCCC
Q ss_conf 2698999970786100
Q gi|254780748|r 81 RAGKNLKERLNSPDST 96 (100)
Q Consensus 81 k~sk~lk~~iN~~~~~ 96 (100)
+||+.|++.||+..+.
T Consensus 126 KpsK~LK~~VN~~~qg 141 (204)
T 2iie_A 126 RPGQKLKSRVENAGGG 141 (204)
T ss_dssp EECHHHHHHHHHHCCC
T ss_pred ECCHHHHHHHHCCCCC
T ss_conf 1099999998587878