HHsearch results for GI: 254780748 and protein with PDBid: 2iie_A
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=99.61 E-value=6.6e-16 Score=121.30 Aligned_cols=63 Identities=41% Similarity=0.713 Sum_probs=57.9
Q ss_pred HHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEECCCHHHHHHHCCCCCC
Q ss_conf 999864985120345788862146541025889888994687346762698999970786100
Q gi|254780748|r 34 TQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFFRAGKNLKERLNSPDST 96 (100)
Q Consensus 34 ~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~Fk~sk~lk~~iN~~~~~ 96 (100)
.+.-..+++|+|+|||+|+++.+++|.||||+|||.+.||++++|+|+||+.|+++||...+.
T Consensus 135 VN~~~qge~v~i~gFG~F~~~~r~aR~gRNPkTge~i~Ip~~~~~~Fk~sk~lk~~lN~~~~~ 197 (204)
T 2iie_A 135 VENAGGGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGGS 197 (204)
T ss_dssp HHHHCCCCCEEETTTEEEEEEEECCEEEECTTTCCEEEECCEEEEEEEECHHHHHHHCSSCCS
T ss_pred HHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHCCCCCC
T ss_conf 858787876543552899998517856779599997886487755677888999997368998