HHSEARCH alignment of GI: 254780748 and SCOP domain: d1owfb_

Alignment
>d1owfb_ a.55.1.1 (B:) Integration host factor beta subunit (IHFB) {Escherichia coli [TaxId: 562]}
Probab=99.93  E-value=2.2e-26  Score=186.22  Aligned_cols=93  Identities=42%  Similarity=0.669  Sum_probs=90.8

Q ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEECCCCCCEEEECCCCEEEE
Q ss_conf             98899999999973899989999999999999999986498512034578886214654102588988899468734676
Q gi|254780748|r    1 MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARLARAPLAQKVISVEEKMVPFF   80 (100)
Q Consensus         1 MtK~eli~~ia~~~~~ls~~~~~~~vd~~~~~i~~~L~~~~~V~i~gfGtF~~~~~~~r~~rNP~Tge~i~i~~~~~v~F   80 (100)
                      |||+|||+.||.+++++++++++.++|+|++.|.++|.+|++|+|+|||+|+++.+++|.||||+|||.+.||++++|+|
T Consensus         1 MtK~eli~~ia~~~~~ls~~~~~~~v~~~~~~i~~~L~~~~~V~l~gfG~F~~~~~~~R~grNP~Tge~i~ip~k~~v~F   80 (94)
T d1owfb_           1 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIAIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHF   80 (94)
T ss_dssp             CBHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEEEECCEEEECTTTCCEEEECCEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEE
T ss_conf             97899999999867999899999999999999999987699287336037887602664315889999898638630898


Q ss_pred             CCCHHHHHHHCCC
Q ss_conf             2698999970786
Q gi|254780748|r   81 RAGKNLKERLNSP   93 (100)
Q Consensus        81 k~sk~lk~~iN~~   93 (100)
                      +||+.|+++||..
T Consensus        81 k~sk~lk~~vN~~   93 (94)
T d1owfb_          81 KPGKELRDRANIY   93 (94)
T ss_dssp             EECHHHHHHHCCC
T ss_pred             ECCHHHHHHHCCC
T ss_conf             1699999987539


SCOP domain information

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: Integration host factor beta subunit (IHFB)
species: Escherichia coli [TaxId: 562]