RPSBLAST alignment of GI: 254780748 and SCOP domain: d1huua_

Alignment

>d1huua_ a.55.1.1 (A:) HU protein {Bacillus stearothermophilus [TaxId: 1422]} Length = 90

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 1  MIKSSLIGTIAKKNPKLNYQDVEKIVNMLLEEMTQALANGGRVEIRGFGSFSVRKRAARL 60
          M K+ LI  +A+ +  L+ +D  K V+ + + +T+AL  G +V++ GFG+F VR+RAAR 
Sbjct: 1  MNKTELINAVAETS-GLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARK 59

Query: 61 ARAPLAQKVISVEEKMVPFFRAGKNLKERL 90
           R P   + + +    VP F+ GK LK+ +
Sbjct: 60 GRNPQTGEEMEIPASKVPAFKPGKALKDAV 89

SCOP domain information

class: All alpha proteins
fold: IHF-like DNA-binding proteins
superfamily: IHF-like DNA-binding proteins
family: Prokaryotic DNA-bending protein
domain: HU protein
species: Bacillus stearothermophilus [TaxId: 1422]