HHsearch alignment for GI: 254780749 and conserved domain: PRK01574
>PRK01574 lspA signal peptidase II; Provisional.
Probab=99.98 E-value=1.6e-32 Score=184.91 Aligned_cols=100 Identities=24% Similarity=0.510 Sum_probs=76.3
Q ss_pred CCCCHHHHH----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCC----C
Q ss_conf 945200299----9999999999999999965550228999999999988799999897631-275776623681----5
Q gi|254780749|r 1 MLSNVSPTI----LVSIRILIIAFIFFIWKKNPKTKSIFDIGYILITTGALGNVVDHCLYGY-VIDYIMIHTQTW----S 71 (108)
Q Consensus 1 m~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~li~gGaiGNliDR~~~G~-VvDfi~~~~~~~----~ 71 (108)
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~lIlgGAiGNliDR~~~~~~VvDFid~~~~~~~g~~~ 137 (169)
T PRK01574 60 IGSNINYSLKKLFFLIIPIIILIFVFSFYL--KEDNRIQRIALLLILSGGIGNLIDRLFRPLGVVDFLDVKFFGIFGLER 137 (169)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
T ss_conf 426995589999999999999999999999--521578999999999898873998810689983779862245346688
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4089999999999999999999940004321
Q gi|254780749|r 72 FAVFNLADLFISIGTCIIIYDDIILQHRQKG 102 (108)
Q Consensus 72 ~pvFNvAD~~I~iG~~lli~~~~~~~~~~k~ 102 (108)
T Consensus 138 wPvFNvAD~~I~iGv~llli~~~~~~~k~~~ 168 (169)
T PRK01574 138 WPTFNFADSYVVIGMILFLIYDFFKKRKSTN 168 (169)
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8705699999999999999999997520248