HHsearch alignment for GI: 254780750 and conserved domain: COG0497
>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair].
Probab=94.36 E-value=0.42 Score=26.69 Aligned_cols=113 Identities=19% Similarity=0.312 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHCCCEEEE
Q ss_conf 53289999999999995899856999325889880567999999999999726-98499974875797664306885899
Q gi|254780750|r 710 RSTFMVEMIETASILNQATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETN-RCRGLLATHFHELTDLSKSLKRFHNA 788 (920)
Q Consensus 710 ~STF~vEm~e~~~IL~~at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~-~~~~lfaTHy~eL~~l~~~~~~v~n~ 788 (920)
T Consensus 437 LSRimL---Alk~i~~~~~~~ptlIFDEVD~GIsG----~~A~aVg~~L~~Ls~~~QVl~VTHlPQVAa~ad~------- 502 (557)
T COG0497 437 LSRIML---ALKVILSRKDDTPTLIFDEVDTGISG----RVAQAVGKKLRRLSEHHQVLCVTHLPQVAAMADT------- 502 (557)
T ss_pred HHHHHH---HHHHHHHCCCCCCEEEEECCCCCCCH----HHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCC-------
T ss_conf 999999---99999716689985997464579975----9999999999998369649999357878752025-------
Q ss_pred EEEEEE-ECCEEEEEEEEEECCCCCCHHHHHHHHCC---CCHHHHHHHHHHHHH
Q ss_conf 999996-09927787777447898877899999829---998999999999999
Q gi|254780750|r 789 TLQVSD-SNEGIIFLHKVIPGIADHSYGIQVGKLAG---LPNTVISRAYDILKT 838 (920)
Q Consensus 789 ~~~~~~-~~~~i~flykl~~G~~~~Sygi~vA~laG---~p~~vi~~A~~~~~~ 838 (920)
T Consensus 503 H~~V~K~~~~~~T~s-~V~~L-~~eeRveEiARMl~G~~iT~~a~a~AkeLL~~ 554 (557)
T COG0497 503 HFLVEKESEDGRTES-RVRPL-DKEERVEEIARMLGGSEVTDEALAHAKELLAA 554 (557)
T ss_pred EEEEEEECCCCCEEE-EEEEC-CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 589997247882677-63538-87678999999856843149999999999975