HHsearch alignment for GI: 254780750 and conserved domain: PRK09112
>PRK09112 DNA polymerase III subunit delta'; Validated.
Probab=93.49 E-value=0.26 Score=28.22 Aligned_cols=119 Identities=22% Similarity=0.224 Sum_probs=57.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC-CCCCHHHCCCCCCCEEEEEE--ECCCCC----------CCCCCHHHH
Q ss_conf 64399996778440789999999999999719-85303532068221056765--237661----------138532899
Q gi|254780750|r 649 SGKLWLLTGPNMGGKSTFLRQNALIVIMAQMG-SYVPASYAHIGIVDKLFSRV--GSADNL----------ASGRSTFMV 715 (920)
Q Consensus 649 ~~~~~iiTGpNmgGKSt~lRqval~vilAQiG-~fVPA~~a~i~~~D~IftRi--Ga~D~l----------~~g~STF~v 715 (920)
T Consensus 44 l~HA~Lf~GP~GiGKaTlA~~~A~~L-l~~~~~~~~~~~~~~pd~~~~~~r~i~~g~hpdl~~i~r~~d~k~~~~~~~-I 121 (352)
T PRK09112 44 LHHALLFEGPEGIGKATLAFHLANHI-LSHPDPNEAPETLADPDPASPLWRQIAQGAHPNLLHLTRPFDEKTGKFKTA-I 121 (352)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHCC-C
T ss_conf 65246535899808999999999998-669986668655678887877899997489999565534322021454335-7
Q ss_pred HHHHHHHHHHHC------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEEECCCHH
Q ss_conf 999999999958------9985699932588988056799999999999972-6984999748757
Q gi|254780750|r 716 EMIETASILNQA------TNQSFVILDEIGRGTATLDGLSIAWATIEYLHET-NRCRGLLATHFHE 774 (920)
Q Consensus 716 Em~e~~~IL~~a------t~~SLVllDElGrGTst~DG~aiA~aile~l~~~-~~~~~lfaTHy~e 774 (920)
T Consensus 122 ~vd~iR~l~~~~~~~~~~~~~kv~Iid~ad~m~~-----~aaNALLK~LEEPp~~~~fiLit~~~~ 182 (352)
T PRK09112 122 TVDEIRRVTHFLSQTSGDGNWRIVIIDPADDMNR-----NAANAILKTLEEPPARALFILISHSSG 182 (352)
T ss_pred CHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH-----HHHHHHHHHHHCCCCCEEEEEEECCHH
T ss_conf 7799999999845488668806999818787469-----999999998534898748998869977