HHsearch alignment for GI: 254780750 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=93.22 E-value=0.27 Score=28.06 Aligned_cols=83 Identities=17% Similarity=0.304 Sum_probs=41.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCC-C-CCCHH--HCCCC---CCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 4399996778440789999999999999719-8-53035--32068---2210567652376611385328999999999
Q gi|254780750|r 650 GKLWLLTGPNMGGKSTFLRQNALIVIMAQMG-S-YVPAS--YAHIG---IVDKLFSRVGSADNLASGRSTFMVEMIETAS 722 (920)
Q Consensus 650 ~~~~iiTGpNmgGKSt~lRqval~vilAQiG-~-fVPA~--~a~i~---~~D~IftRiGa~D~l~~g~STF~vEm~e~~~ 722 (920)
T Consensus 43 ~g~~lltGe~GtGKTtllr~l-----~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~lg~~~~-~~~~~~~~~~l~~~L~ 116 (269)
T TIGR03015 43 EGFILITGEVGAGKTTLIRNL-----LKRLDQERVVAAKLVNTRVDAEDLLRMVAADFGLETE-GRDKAALLRELEDFLI 116 (269)
T ss_pred CCEEEEECCCCCCHHHHHHHH-----HHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHHH
T ss_conf 965999729989889999999-----9845934548999769999999999999998598988-9899999999999999
Q ss_pred HHHHCCCCCEEEEECC
Q ss_conf 9995899856999325
Q gi|254780750|r 723 ILNQATNQSFVILDEI 738 (920)
Q Consensus 723 IL~~at~~SLVllDEl 738 (920)
T Consensus 117 ~~~~~g~~~vliIDEA 132 (269)
T TIGR03015 117 EQFAAGKRALLVVDEA 132 (269)
T ss_pred HHHHCCCCEEEEEECH
T ss_conf 9996699469997242