HHsearch alignment for GI: 254780750 and conserved domain: TIGR03269
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=97.67 E-value=0.00047 Score=48.70 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=25.4
Q ss_pred EEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 434563587777664399996778440789999999
Q gi|254780750|r 636 ANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNA 671 (920)
Q Consensus 636 pNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqva 671 (920)
T Consensus 300 l~~vs~~v----~~GEi~gi~G~nGsGKsTL~k~l~ 331 (520)
T TIGR03269 300 VDNVSLEV----KEGEIFGIVGTSGAGKTTLSKIIA 331 (520)
T ss_pred EECEEEEE----CCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 51206897----289689998788887899999994