HHsearch alignment for GI: 254780750 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.

Probab=96.30  E-value=0.052  Score=33.48  Aligned_cols=54  Identities=15%  Similarity=0.202  Sum_probs=32.6

Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH-HHHHHH
Q ss_conf             8998569993258898805679999999999997269849997487579-766430
Q gi|254780750|r  727 ATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHEL-TDLSKS  781 (920)
Q Consensus       727 at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL-~~l~~~  781 (920)
T Consensus       443 ~~~P~vlilDEPT~glD~~~~~~i~~~l~~~~-~~~g~tvi~iShDl~~~~~~~dR  497 (520)
T TIGR03269       443 IKEPRIVILDEPTGTMDPITKVDVTHSILKAR-EEMEQTFIIVSHDMDFVLDVCDR  497 (520)
T ss_pred             HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEECCCHHHHHHHCCE
T ss_conf             97989899938601133899999999999999-83298999977888999986999