HHsearch alignment for GI: 254780750 and conserved domain: TIGR03375

>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=97.81  E-value=0.00052  Score=48.39  Aligned_cols=131  Identities=27%  Similarity=0.321  Sum_probs=72.6

Q ss_pred             EEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHC------------------CCCCCC-
Q ss_conf             4443456358777766439999677844078999999999999971985303532------------------068221-
Q gi|254780750|r  634 FIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYA------------------HIGIVD-  694 (920)
Q Consensus       634 fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a------------------~i~~~D-  694 (920)
T Consensus       479 ~vl~~vsl~i----~~Ge~vaIvG~sGsGKSTL~kll--------~Gl~~p~~G~i~idg~~~~~~~~~~~r~~i~~v~Q  546 (694)
T TIGR03375       479 PALDNVSLTI----RPGEKVAIIGRIGSGKSTLLKLL--------LGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQ  546 (694)
T ss_pred             HHHCCHHHEE----CCCCEEEEEECCCCCHHHHHHHH--------CCCCCCCCCEEEECCEECCCCCHHHHHHHCEEECC
T ss_conf             2213631188----79978999805898788999985--------56758998879989854254999999730213576


Q ss_pred             --EEEEEEECCCCCCCCCCHH-HHHHHHHHHHH----------------------------------HH--CCCCCEEEE
Q ss_conf             --0567652376611385328-99999999999----------------------------------95--899856999
Q gi|254780750|r  695 --KLFSRVGSADNLASGRSTF-MVEMIETASIL----------------------------------NQ--ATNQSFVIL  735 (920)
Q Consensus       695 --~IftRiGa~D~l~~g~STF-~vEm~e~~~IL----------------------------------~~--at~~SLVll  735 (920)
T Consensus       547 ~~~lf~g-Ti~eNi~~~~~~~~~~~i~~a~~~a~l~~~I~~lp~g~~t~i~e~G~~LSgGqrQri~lARAl~~~p~ilil  625 (694)
T TIGR03375       547 DPRLFYG-TLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLL  625 (694)
T ss_pred             CCCCCCC-CHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             7711074-699998416999999999999998197999971856678774689994689999999999999579998999


Q ss_pred             ECCCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEEECCCHHHHHHHHH
Q ss_conf             32588988056799999999999972-69849997487579766430
Q gi|254780750|r  736 DEIGRGTATLDGLSIAWATIEYLHET-NRCRGLLATHFHELTDLSKS  781 (920)
Q Consensus       736 DElGrGTst~DG~aiA~aile~l~~~-~~~~~lfaTHy~eL~~l~~~  781 (920)
T Consensus       626 DE~---ts~LD~~~-e~~i~~~l~~~~~~~T~i~itHrls~i~~aD~  668 (694)
T TIGR03375       626 DEP---TSAMDNRS-EERFKDRLKRWLAGKTLVLVTHRTSLLDLVDR  668 (694)
T ss_pred             ECC---CCCCCHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHHCCE
T ss_conf             787---56889999-99999999986699989998168999984999