HHsearch alignment for GI: 254780750 and conserved domain: TIGR03410
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=97.74 E-value=0.00037 Score=49.52 Aligned_cols=133 Identities=25% Similarity=0.318 Sum_probs=73.3
Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCH-----------------HHCCCCC-----
Q ss_conf 443456358777766439999677844078999999999999971985303-----------------5320682-----
Q gi|254780750|r 635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPA-----------------SYAHIGI----- 692 (920)
Q Consensus 635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA-----------------~~a~i~~----- 692 (920)
T Consensus 15 ~L~~vs~~v----~~Gei~~liGpNGaGKSTL~~~i--------~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~gig~v~Q 82 (230)
T TIGR03410 15 ILRGVSLEV----PKGEVTCVLGRNGVGKTTLLKTL--------MGLLPVKSGSIRLDGEDITKLPPHERARAGIAYVPQ 82 (230)
T ss_pred EECCEEEEE----CCCCEEEEECCCCCHHHHHHHHH--------HCCCCCCCEEEEECCEECCCCCHHHHHHCCEEEECC
T ss_conf 888717799----99979999999994099999999--------779999954999999999999989999829599377
Q ss_pred CCEEEEEEECCCCCCCCCCHH-------HHHHHHHHHHHH-----------------------HCCCCCEEEEECCCCCC
Q ss_conf 210567652376611385328-------999999999999-----------------------58998569993258898
Q gi|254780750|r 693 VDKLFSRVGSADNLASGRSTF-------MVEMIETASILN-----------------------QATNQSFVILDEIGRGT 742 (920)
Q Consensus 693 ~D~IftRiGa~D~l~~g~STF-------~vEm~e~~~IL~-----------------------~at~~SLVllDElGrGT 742 (920)
T Consensus 83 ~~~lf~~lTV~Enl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~~~LSGGq~Qrv~iAraL~~~P~lLlLDEPt~gL 162 (230)
T TIGR03410 83 GREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGI 162 (230)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 74257678899999999987496678899999999999999983851119999999999999996299889993852269
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH-HHHH
Q ss_conf 8056799999999999972698499974875797-6643
Q gi|254780750|r 743 ATLDGLSIAWATIEYLHETNRCRGLLATHFHELT-DLSK 780 (920)
Q Consensus 743 st~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~-~l~~ 780 (920)
T Consensus 163 D~~~~~~i-~~~i~~l~~~~g~tvl~vtH~l~~~~~~ad 200 (230)
T TIGR03410 163 QPSIIKDI-GRVIRRLRAEGGMAILLVEQYLDFARELAD 200 (230)
T ss_pred CHHHHHHH-HHHHHHHHHCCCCEEEEEECCHHHHHHHCC
T ss_conf 99999999-999999997179899999088899999699