HHsearch alignment for GI: 254780750 and conserved domain: cd00267
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=98.62 E-value=5.9e-07 Score=70.37 Aligned_cols=124 Identities=29% Similarity=0.370 Sum_probs=77.2
Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCE---------EEEEEECCCC
Q ss_conf 4434563587777664399996778440789999999999999719853035320682210---------5676523766
Q gi|254780750|r 635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIVDK---------LFSRVGSADN 705 (920)
Q Consensus 635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~D~---------IftRiGa~D~ 705 (920)
T Consensus 14 ~l~~i~~~i----~~Ge~~~i~G~nGaGKSTLl~~l~gl~--------~~-~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q 80 (157)
T cd00267 14 ALDNVSLTL----KAGEIVALVGPNGSGKSTLLRAIAGLL--------KP-TSGEILIDGKDIAKLPLEELRRRIGYVPQ 80 (157)
T ss_pred EEEEEEEEE----CCCCEEEEECCCCCCHHHHHHHHHCCC--------CC-CCCEEEECCEECCCCCHHHHHHCCCCCCC
T ss_conf 782117898----799799998788999899999995884--------79-96289999999997999999940608766
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
Q ss_conf 11385328999999999999589985699932588988056799999999999972698499974875797664
Q gi|254780750|r 706 LASGRSTFMVEMIETASILNQATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLS 779 (920)
Q Consensus 706 l~~g~STF~vEm~e~~~IL~~at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~~l~ 779 (920)
T Consensus 81 LSgG----qkqrv~iA~al--~~~p~ililDEPtsgLD~~~~~~l~~-~i~~l~~~-g~tii~vtH~~~~~~~~ 146 (157)
T cd00267 81 LSGG----QRQRVALARAL--LLNPDLLLLDEPTSGLDPASRERLLE-LLRELAEE-GRTVIIVTHDPELAELA 146 (157)
T ss_pred CCHH----HHHHHHHHHHH--HCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHHC-CCEEEEEECCHHHHHHH
T ss_conf 8869----99999999999--70999999969876689999999999-99999968-99999990899999997