HHsearch alignment for GI: 254780750 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=98.23 E-value=4e-05 Score=56.73 Aligned_cols=130 Identities=25% Similarity=0.284 Sum_probs=78.0
Q ss_pred EEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCC----
Q ss_conf 4443456358777766439999677844078999999999999971985303532068221056765237661138----
Q gi|254780750|r 634 FIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASG---- 709 (920)
Q Consensus 634 fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i~~~D~IftRiGa~D~l~~g---- 709 (920)
T Consensus 14 ~aL~~vsl~i----~~Gei~~lvG~nGaGKSTl~~~i~--------Gl~~p-~~G~i~i~G~~i~~~~~~~~~~~gi~~v 80 (163)
T cd03216 14 KALDGVSLSV----RRGEVHALLGENGAGKSTLMKILS--------GLYKP-DSGEILVDGKEVSFASPRDARRAGIAMV 80 (163)
T ss_pred EEECCEEEEE----CCCCEEEEECCCCCCHHHHHHHHH--------CCCCC-CCCEEEECCEECCCCCHHHHHHCCCCEE
T ss_conf 9885548898----799899999889989999999995--------77689-8578999999999999999998799489
Q ss_pred --CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH-HHHHH
Q ss_conf --532899999999999958998569993258898805679999999999997269849997487579-76643
Q gi|254780750|r 710 --RSTFMVEMIETASILNQATNQSFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHEL-TDLSK 780 (920)
Q Consensus 710 --~STF~vEm~e~~~IL~~at~~SLVllDElGrGTst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL-~~l~~ 780 (920)
T Consensus 81 ~qLSgG~~Qrv~iaral--~~~p~llilDEPt~gLD~~~~~~i-~~~l~~l~~~-G~til~vtH~l~~~~~~~D 150 (163)
T cd03216 81 YQLSVGERQMVEIARAL--ARNARLLILDEPTAALTPAEVERL-FKVIRRLRAQ-GVAVIFISHRLDEVFEIAD 150 (163)
T ss_pred CCCCHHHHHHHHHHHHH--HHCCCEEEEECCCCCCCHHHHHHH-HHHHHHHHHC-CCEEEEEECCHHHHHHHCC
T ss_conf 46998999999999999--729999999097557999999999-9999999878-9899999384999998699