HHsearch alignment for GI: 254780750 and conserved domain: cd03268
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=97.93 E-value=0.00043 Score=48.99 Aligned_cols=141 Identities=19% Similarity=0.282 Sum_probs=72.3
Q ss_pred EEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH-------------------HHHHCCCCCCHHH--CCCCC
Q ss_conf 44434563587777664399996778440789999999999-------------------9997198530353--20682
Q gi|254780750|r 634 FIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIV-------------------IMAQMGSYVPASY--AHIGI 692 (920)
Q Consensus 634 fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~v-------------------ilAQiG~fVPA~~--a~i~~ 692 (920)
T Consensus 14 ~al~~vs~~v----~~Gei~gllG~NGaGKSTLl~~i~Gl~~p~~G~i~i~G~~~~~~~~~~~~ig~~~~~~~l~~~ltv 89 (208)
T cd03268 14 RVLDDISLHV----KKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred EEECCEEEEE----CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCHHHHHHEEEEECCCCCCCCCCH
T ss_conf 9871516688----698199999999999999999995783789899999999999796857108999477767898899
Q ss_pred CCE-----------------EEEEEECCCCCCCCCCHHHHHHHH-HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 210-----------------567652376611385328999999-99999958998569993258898805679999999
Q gi|254780750|r 693 VDK-----------------LFSRVGSADNLASGRSTFMVEMIE-TASILNQATNQSFVILDEIGRGTATLDGLSIAWAT 754 (920)
Q Consensus 693 ~D~-----------------IftRiGa~D~l~~g~STF~vEm~e-~~~IL~~at~~SLVllDElGrGTst~DG~aiA~ai 754 (920)
T Consensus 90 ~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~kqrl~la~al~~~p~lliLDEPt~GLD~~~~~~-i~~~ 168 (208)
T cd03268 90 RENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKE-LREL 168 (208)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH-HHHH
T ss_conf 999999998749988999999998099503369035699999999999999856999999938876899999999-9999
Q ss_pred HHHHHHHCCCEEEEECCCHH-HHHHHH
Q ss_conf 99999726984999748757-976643
Q gi|254780750|r 755 IEYLHETNRCRGLLATHFHE-LTDLSK 780 (920)
Q Consensus 755 le~l~~~~~~~~lfaTHy~e-L~~l~~ 780 (920)
T Consensus 169 l~~l~~~-g~til~~sH~l~e~~~~~d 194 (208)
T cd03268 169 ILSLRDQ-GITVLISSHLLSEIQKVAD 194 (208)
T ss_pred HHHHHHC-CCEEEEECCCHHHHHHHCC
T ss_conf 9999958-9999998986899999699