HHsearch alignment for GI: 254780750 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=96.94 E-value=0.029 Score=35.40 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=27.0
Q ss_pred CEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 044434563587777664399996778440789999999
Q gi|254780750|r 633 PFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNA 671 (920)
Q Consensus 633 ~fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqva 671 (920)
T Consensus 34 ~~vL~~inl~I----~~Ge~vaIvG~sGsGKSTL~~ll~ 68 (257)
T cd03288 34 KPVLKHVKAYI----KPGQKVGICGRTGSGKSSLSLAFF 68 (257)
T ss_pred CCCEECEEEEE----CCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 57310538998----799999999999981999999996