HHsearch alignment for GI: 254780750 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=97.35 E-value=0.0031 Score=42.55 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=25.5
Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 4434563587777664399996778440789999999
Q gi|254780750|r 635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNA 671 (920)
Q Consensus 635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqva 671 (920)
T Consensus 16 vL~~inl~i----~~Ge~~~IvG~sGsGKSTLl~~l~ 48 (218)
T cd03290 16 TLSNINIRI----PTGQLTMIVGQVGCGKSSLLLAIL 48 (218)
T ss_pred EEECEEEEE----CCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 564769998----699999999999980999999985