>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.27 E-value=0.0073 Score=39.81 Aligned_cols=139 Identities=20% Similarity=0.273 Sum_probs=69.5 Q ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC------CC---CHHH--CCCCCC---CEEEEEE Q ss_conf 44345635877776643999967784407899999999999997198------53---0353--206822---1056765 Q gi|254780750|r 635 IANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGS------YV---PASY--AHIGIV---DKLFSRV 700 (920) Q Consensus 635 VpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~------fV---PA~~--a~i~~~---D~IftRi 700 (920) T Consensus 16 al~~vsl~i----~~Ge~~~ilGpSG~GKSTllr~i~gl~~-p~~G~I~i~g~~i~~~~~~~lrr~ig~vfQ~~~Lfp~l 90 (242) T cd03295 16 AVNNLNLEI----AKGEFLVLIGPSGSGKTTTMKMINRLIE-PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242) T ss_pred EEEEEEEEE----CCCCEEEEECCCCCHHHHHHHHHHCCCC-CCCEEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCC T ss_conf 983027688----6998999999999569999999975999-98159999999999999789738867991799758888 Q ss_pred ECCCCCC-----CCCCHHH-----HHHHHH-----HHHHH-------------------HCCCCCEEEEECCCCCCCHHH Q ss_conf 2376611-----3853289-----999999-----99999-------------------589985699932588988056 Q gi|254780750|r 701 GSADNLA-----SGRSTFM-----VEMIET-----ASILN-------------------QATNQSFVILDEIGRGTATLD 746 (920) Q Consensus 701 Ga~D~l~-----~g~STF~-----vEm~e~-----~~IL~-------------------~at~~SLVllDElGrGTst~D 746 (920) T Consensus 91 tV~eNi~~~~~~~~~~~~~~~~rv~ell~~v~L~~~~~~~~~p~~LSGGqkQRvaiARAl~~~P~ilLlDEP---~saLD 167 (242) T cd03295 91 TVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEP---FGALD 167 (242) T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCC---CCCCC T ss_conf 299999999997599999999999999987499930110079566899999999999999629999998187---65469 Q ss_pred HHH--HHHHHHHHHHHHCCCEEEEECCCHHHH-HHHHH Q ss_conf 799--999999999972698499974875797-66430 Q gi|254780750|r 747 GLS--IAWATIEYLHETNRCRGLLATHFHELT-DLSKS 781 (920) Q Consensus 747 G~a--iA~aile~l~~~~~~~~lfaTHy~eL~-~l~~~ 781 (920) T Consensus 168 ~~~~~~i~~~l~~l~~~~~~T~i~vTHd~~ea~~~aDr 205 (242) T cd03295 168 PITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADR 205 (242) T ss_pred HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCE T ss_conf 89999999999999997599999999899999996998

HHsearch alignment for GI: 254780750 and conserved domain: cd03295