HHsearch alignment for GI: 254780750 and conserved domain: cd03301

>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=97.73  E-value=0.0004  Score=49.23  Aligned_cols=134  Identities=21%  Similarity=0.255  Sum_probs=71.5

Q ss_pred             EEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC----------CCCC---------
Q ss_conf             444345635877776643999967784407899999999999997198530353206----------8221---------
Q gi|254780750|r  634 FIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVPASYAHI----------GIVD---------  694 (920)
Q Consensus       634 fVpNdi~l~~~~~~~~~~~~iiTGpNmgGKSt~lRqval~vilAQiG~fVPA~~a~i----------~~~D---------  694 (920)
T Consensus        14 ~~l~~isl~v----~~Ge~~~i~GpSG~GKSTlLr~ia--------Gl~~p-~~G~I~~~g~~i~~~~~~~R~ig~VfQ~   80 (213)
T cd03301          14 TALDDLNLDI----ADGEFVVLLGPSGCGKTTTLRMIA--------GLEEP-TSGRIYIGGRDVTDLPPKDRDIAMVFQN   80 (213)
T ss_pred             EEECCCEEEE----CCCCEEEEECCCCCHHHHHHHHHH--------CCCCC-CCEEEEECCEECCCCCHHHCCEEEEECC
T ss_conf             9987617798----699899999999880999999997--------69999-8639999999999999767887899458


Q ss_pred             -EEEEEEECCCCCCCC-----CCHH--------HHHHHHHHHH------------------HH-HCCCCCEEEEECCCCC
Q ss_conf             -056765237661138-----5328--------9999999999------------------99-5899856999325889
Q gi|254780750|r  695 -KLFSRVGSADNLASG-----RSTF--------MVEMIETASI------------------LN-QATNQSFVILDEIGRG  741 (920)
Q Consensus       695 -~IftRiGa~D~l~~g-----~STF--------~vEm~e~~~I------------------L~-~at~~SLVllDElGrG  741 (920)
T Consensus        81 ~~LfP~ltV~eNI~~~l~~~~~~~~e~~~~v~~~l~~~gl~~~~~~~P~~LSGGqkQRVaiARAl~~~P~lLLlDEP~sa  160 (213)
T cd03301          81 YALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSN  160 (213)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             76465470999999899985999899999999999875992465099556999999999999998759998998388764


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH-HHHHH
Q ss_conf             88056799999999999972698499974875797-66430
Q gi|254780750|r  742 TATLDGLSIAWATIEYLHETNRCRGLLATHFHELT-DLSKS  781 (920)
Q Consensus       742 Tst~DG~aiA~aile~l~~~~~~~~lfaTHy~eL~-~l~~~  781 (920)
T Consensus       161 LD~~~r~~i-~~~l~~~~~~~~~T~i~vTHd~~ea~~l~dr  200 (213)
T cd03301         161 LDAKLRVQM-RAELKRLQQRLGTTTIYVTHDQVEAMTMADR  200 (213)
T ss_pred             CCHHHHHHH-HHHHHHHHHHHCCEEEEECCCHHHHHHHCCE
T ss_conf             298999999-9999999997499899999998999996998