HHsearch alignment for GI: 254780750 and conserved domain: pfam02463
>pfam02463 SMC_N RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Probab=90.60 E-value=0.29 Score=27.87 Aligned_cols=12 Identities=0% Similarity=-0.050 Sum_probs=4.6
Q ss_pred CCHHHHHHHHHH
Q ss_conf 587899999852
Q gi|254780750|r 180 SNHDRLISDIMR 191 (920)
Q Consensus 180 ~~~d~l~~~L~~ 191 (920)
T Consensus 117 ~~~~dv~~ll~~ 128 (1162)
T pfam02463 117 VTKKDVAELLES 128 (1162)
T ss_pred CCHHHHHHHHHH
T ss_conf 379999999997