HHsearch alignment for GI: 254780750 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.

Probab=95.73  E-value=0.0092  Score=39.08  Aligned_cols=90  Identities=20%  Similarity=0.175  Sum_probs=43.4

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHH-CCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             3999967784407899999999999997-198530353206822105676523766113853289999999999995899
Q gi|254780750|r  651 KLWLLTGPNMGGKSTFLRQNALIVIMAQ-MGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATN  729 (920)
Q Consensus       651 ~~~iiTGpNmgGKSt~lRqval~vilAQ-iG~fVPA~~a~i~~~D~IftRiGa~D~l~~g~STF~vEm~e~~~IL~~at~  729 (920)
T Consensus         3 ~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~---~~~~~~~~   76 (148)
T smart00382        3 EVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVG-GK--KASGSGELRLR---LALALARK   76 (148)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHC-CC--CCCCCHHHHHH---HHHHHHHH
T ss_conf             78999999970299999999987266899689987599898889876530001-12--21051999999---99999984


Q ss_pred             --CCEEEEECCCCCCCHHH
Q ss_conf             --85699932588988056
Q gi|254780750|r  730 --QSFVILDEIGRGTATLD  746 (920)
Q Consensus       730 --~SLVllDElGrGTst~D  746 (920)
T Consensus        77 ~~~~viiiDei~~~~~~~~   95 (148)
T smart00382       77 LKPDVLILDEITSLLDAEQ   95 (148)
T ss_pred             CCCCEEEEECCHHHCCCCC
T ss_conf             4998999827502147620