BLAST/PSIBLAST alignment of GI: 254780750 and GI: 209547644 at iteration 1
>gi|209547644|ref|YP_002279561.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 880
>gi|209533400|gb|ACI53335.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 880
 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/880 (57%), Positives = 666/880 (75%), Gaps = 13/880 (1%)

Query: 28  MMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGKDIPMCGVP 87
           MM QYIEIK+ NP SL+FYRMGDFYELFF+DAL ASR LGITLTKRG+H+G+DIPMCGVP
Sbjct: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFEDALEASRALGITLTKRGQHMGQDIPMCGVP 60

Query: 88  VHTANHYIQKLIKIGHRIAICEQIESPLEAKKRGNKSLVRRNVVRLVTPGTLTEDQLLSP 147
           VH A+ Y+QKLI +G R+A+CEQIE P EAKKRG KS+V+R+VVRLVTPGT+TE++LLSP
Sbjct: 61  VHAADDYLQKLISLGFRVAVCEQIEDPAEAKKRGGKSVVKRDVVRLVTPGTITEEKLLSP 120

Query: 148 TDSNYLMAVARIRTE----WAIAWIDISTGIFKISTSNHDRLISDIMRIDPREIIFSEKE 203
           ++SNYLMA+ RIR       A+AWIDISTG+F+++ +   RL++DI+RIDPRE+I  E  
Sbjct: 121 SESNYLMALTRIRGGAEPLLALAWIDISTGVFRLAETEASRLLADILRIDPRELILPETI 180

Query: 204 LSHAEYKSLFETLGNVAVAQPNVFFDHSISESRIADYYNITTVDTFGSFSQVEKTAAAAA 263
               E K +F+ LG  AV QP+V FD + +E RIA Y+ ++T+D FG+FS+ E  AAAAA
Sbjct: 181 FHDPELKPVFDVLGRTAVPQPSVLFDSASAEGRIARYFGVSTLDGFGTFSRAELAAAAAA 240

Query: 264 ISYIKKTQMVNKPTIGYPEREDIQSTLFIDSAARSNLEILRTLSGSREQSLLKTIDYSIT 323
           ++Y++KTQ+  +P +G PERE   STLFID A R+NLE+ RTLSG R  SLLK ID ++T
Sbjct: 241 VAYVEKTQIAERPPLGKPERESAASTLFIDPATRANLELARTLSGDRNGSLLKAIDRTVT 300

Query: 324 GAGGRLFAERIASPLTDSTKINTRLDSINFFIQNPILINPIQKILKSSPDVPRSLSRLKI 383
           G G RL AER+ SPLTD  +IN RLDSI F I  P L   ++  LK  PD+PR+LSRL +
Sbjct: 301 GGGARLLAERLMSPLTDPARINARLDSIGFLIDEPSLCGNLRDTLKHVPDMPRALSRLAL 360

Query: 384 GRGEPKDIAVIRDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQSLEKTLSSMLSDDL 443
            RG P+D++ IR G+++  ++  +     LPEEL  A+  L+ LP +LE  L+  L+D+L
Sbjct: 361 DRGGPRDLSAIRQGLQAANDVAAMLASAMLPEELGQALSGLQALPAALETLLAETLADEL 420

Query: 444 PTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNLKIKHNNNLGYFI 503
           P  KRDGGFLRDGA A LDE R+LRDQS+R+IA LQL+YAEE  I++LKIKHNN LGYFI
Sbjct: 421 PLLKRDGGFLRDGASAELDEVRALRDQSRRVIAGLQLQYAEEIGIRSLKIKHNNILGYFI 480

Query: 504 EVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNATNSALLIELESFE 563
           EVT+ +AS +    E+K RFIHRQTM++  RFTT EL DLE+RI NA + AL IEL +FE
Sbjct: 481 EVTAGNASPMTDTAEAKARFIHRQTMASAMRFTTTELADLESRIANAADRALTIELAAFE 540

Query: 564 ILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRPIIDNSTNFIVKDGRHPIVE 623
            ++ A++ ++E++ + ++ +A+ID++ +LA+LA+EQ YCRP +D S  F +  GRHP+VE
Sbjct: 541 RMTAAVVAEAEAIKSGARALAVIDVAASLALLAEEQAYCRPQVDGSKMFAIDGGRHPVVE 600

Query: 624 KTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYV 683
           + L++Q+S PF+AN+CDLS       G +WLLTGPNMGGKSTFLRQNALI I+AQMGS+V
Sbjct: 601 QALRRQASGPFVANNCDLSPKAGDKDGAIWLLTGPNMGGKSTFLRQNALIAILAQMGSFV 660

Query: 684 PASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVILDEIGRGTA 743
           PA+ AHIGIVD+LFSRVG++D+LA GRSTFMVEM+ETA+ILNQA+++S VILDEIGRGTA
Sbjct: 661 PATSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQASDRSLVILDEIGRGTA 720

Query: 744 TLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATLQVSDSNEGIIFLH 803
           T DGLSIAWA++E+LHE NRCRGL ATHFHELT LS+ L R  NAT++V + +  +IFLH
Sbjct: 721 TFDGLSIAWASVEHLHEANRCRGLFATHFHELTVLSEKLVRLSNATMRVKEWDGDVIFLH 780

Query: 804 KVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKLYHHNQK-----DMRLYYPEIQ 858
           +V PG AD SYGIQV +LAGLP +V++RA D+L   E     N       D+ L+   ++
Sbjct: 781 EVGPGAADRSYGIQVARLAGLPASVVTRARDVLTRLEDADRKNPASQLIDDLPLFQVAVR 840

Query: 859 TKESKNNLSKNDKLFVEKIKCLNLDEMSPLTALKTLYAVK 898
            +++    SK +    E +K ++LD+M+P  A+  LY +K
Sbjct: 841 REDTARGPSKVE----ETLKAMSLDDMTPREAMDALYDLK 876