RPSBLAST alignment for GI: 254780750 and conserved domain: COG0249
>gnl|CDD|30598 COG0249, MutS, Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair]. Length = 843
Score = 813 bits (2101), Expect = 0.0
Identities = 382/885 (43%), Positives = 547/885 (61%), Gaps = 47/885 (5%)
Query: 20 ENLKSSTPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGK 79
+ TPMM+QY+EIK+ PD+L+F+RMGDFYELFF+DA +A+R L ITLTKRG
Sbjct: 1 SSKAKLTPMMQQYLEIKAQYPDTLLFFRMGDFYELFFEDAKIAARLLDITLTKRGN---- 56
Query: 80 DIPMCGVPVHTANHYIQKLIKIGHRIAICEQIESPLEAKKRGNKSLVRRNVVRLVTPGTL 139
IPM GVP H ++Y+ KLI++G+++AICEQ+E P EAK +V R VVR+VTPGTL
Sbjct: 57 -IPMAGVPYHALDYYLAKLIELGYKVAICEQLEDPAEAKG-----VVERKVVRVVTPGTL 110
Query: 140 TEDQLLSPTDSNYLMAVARIR-TEWAIAWIDISTGIFKISTSNHDRLISDIMRIDPREII 198
T++ LLS ++NYL A+A R + +A+ID+STG F +S ++L+S++ R+ P+E++
Sbjct: 111 TDEALLSDRENNYLAALAIDRDGKVGLAFIDLSTGEFFVSEFEREKLLSELKRLQPKELL 170
Query: 199 FSEKELSHAEYKSLFETLGNVAVAQPNVFFDHSISESRIADYYNITTVDTFGSFS-QVEK 257
SE LS + G V P FFD +E +++Y+ + +D FG S +
Sbjct: 171 LSESLLSSTLAEIQK---GLFVVRLPASFFDEDDAEEILSEYFGVRDLDGFGLISTPLAL 227
Query: 258 TAAAAAISYIKKTQMVNKPTIGYPEREDIQSTLFIDSAARSNLEILRTLSG-SREQSLLK 316
+AA A +SY+K TQ P I +R D++ + +D+A R NLE+ L G ++ SL
Sbjct: 228 SAAGALLSYLKDTQKTFLPHIQIIQRYDLEDYMVLDAATRRNLELFSNLRGNGKKGSLFW 287
Query: 317 TIDYSITGAGGRLFAERIASPLTDSTKINTRLDSINFFIQNPILINPIQKILKSSPDVPR 376
+D ++T G RL + PL D +I RLD++ NP L ++++LK PD+ R
Sbjct: 288 LLDRTVTPMGSRLLKRWLLQPLLDKEEIEERLDAVEELKDNPELREKLREMLKKVPDLER 347
Query: 377 SLSRLKIGRGEPKDIAVIRDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQ--SLEKT 434
LSRL +GR P+D+ +RD + I L +L +E ++ L L +
Sbjct: 348 LLSRLSLGRASPRDLLRLRDSLEKIPEIFKLLSSLKSESDLLLLLEDIESLDYLAELLEL 407
Query: 435 LSSMLSDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNLKIK 494
L + +++D P RDG +++G + LDE R L + +K IA L+L+ E T IK+LKIK
Sbjct: 408 LETAINEDPPLAVRDG-IIKEGYNIELDELRDLLNNAKEWIAKLELEERERTGIKSLKIK 466
Query: 495 HNNNLGYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNATNSA 554
+N GY+IEVT S+A ++ D +I RQT+ N RFTT EL +LE ++ +A
Sbjct: 467 YNKVYGYYIEVTKSNAKLVPDD------YIRRQTLKNAERFTTPELKELEEKLLDAEEKI 520
Query: 555 LLIELESFEILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRPIIDNSTNFIV 614
L +E E F+ L I+ L ++ +A +D+ +LA +A EQNY RP +S + +
Sbjct: 521 LALEYELFDELREKILAHINELQALAKALAELDVLSSLAEIAAEQNYVRPEFVDSNDLEI 580
Query: 615 KDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIV 674
K+GRHP+VE L F+ ND DLS + ++ L+TGPNMGGKST+LRQ ALIV
Sbjct: 581 KEGRHPVVEAVLD----NGFVPNDIDLS-----GNRRIILITGPNMGGKSTYLRQVALIV 631
Query: 675 IMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVI 734
I+AQ+GS+VPA A IGIVD++F+R+G+AD+LASGRSTFMVEM+ETA+IL+ AT +S VI
Sbjct: 632 ILAQIGSFVPAEKARIGIVDRIFTRIGAADDLASGRSTFMVEMLETANILDNATERSLVI 691
Query: 735 LDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATLQVSD 794
LDEIGRGT+T DGL+IAWA +EYLHE CR L ATH+HELT+L + L + N + +
Sbjct: 692 LDEIGRGTSTYDGLAIAWAVLEYLHEKIGCRTLFATHYHELTELEEKLPQVKNYHMSAVE 751
Query: 795 SNEGIIFLHKVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKLYHHNQKDMRLYY 854
I FL+KV PGIAD SYGI V KLAGLP VI RA +IL EK + ++
Sbjct: 752 EGGDITFLYKVKPGIADKSYGIHVAKLAGLPEEVIERAREILAELEKESRSSNLELN--- 808
Query: 855 PEIQTKESKNNLSKNDKLFVEKIKCLNLDEMSPLTALKTLYAVKA 899
+ +LS K+ ++ +K L+ DE++P AL LY +K
Sbjct: 809 --------QKDLSLFPKV-LKALKSLDPDELTPR-ALNLLYELKK 843