RPSBLAST alignment for GI: 254780750 and conserved domain: COG0249

>gnl|CDD|30598 COG0249, MutS, Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair]. Length = 843
 Score =  813 bits (2101), Expect = 0.0
 Identities = 382/885 (43%), Positives = 547/885 (61%), Gaps = 47/885 (5%)

Query: 20  ENLKSSTPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGK 79
            +    TPMM+QY+EIK+  PD+L+F+RMGDFYELFF+DA +A+R L ITLTKRG     
Sbjct: 1   SSKAKLTPMMQQYLEIKAQYPDTLLFFRMGDFYELFFEDAKIAARLLDITLTKRGN---- 56

Query: 80  DIPMCGVPVHTANHYIQKLIKIGHRIAICEQIESPLEAKKRGNKSLVRRNVVRLVTPGTL 139
            IPM GVP H  ++Y+ KLI++G+++AICEQ+E P EAK      +V R VVR+VTPGTL
Sbjct: 57  -IPMAGVPYHALDYYLAKLIELGYKVAICEQLEDPAEAKG-----VVERKVVRVVTPGTL 110

Query: 140 TEDQLLSPTDSNYLMAVARIR-TEWAIAWIDISTGIFKISTSNHDRLISDIMRIDPREII 198
           T++ LLS  ++NYL A+A  R  +  +A+ID+STG F +S    ++L+S++ R+ P+E++
Sbjct: 111 TDEALLSDRENNYLAALAIDRDGKVGLAFIDLSTGEFFVSEFEREKLLSELKRLQPKELL 170

Query: 199 FSEKELSHAEYKSLFETLGNVAVAQPNVFFDHSISESRIADYYNITTVDTFGSFS-QVEK 257
            SE  LS    +      G   V  P  FFD   +E  +++Y+ +  +D FG  S  +  
Sbjct: 171 LSESLLSSTLAEIQK---GLFVVRLPASFFDEDDAEEILSEYFGVRDLDGFGLISTPLAL 227

Query: 258 TAAAAAISYIKKTQMVNKPTIGYPEREDIQSTLFIDSAARSNLEILRTLSG-SREQSLLK 316
           +AA A +SY+K TQ    P I   +R D++  + +D+A R NLE+   L G  ++ SL  
Sbjct: 228 SAAGALLSYLKDTQKTFLPHIQIIQRYDLEDYMVLDAATRRNLELFSNLRGNGKKGSLFW 287

Query: 317 TIDYSITGAGGRLFAERIASPLTDSTKINTRLDSINFFIQNPILINPIQKILKSSPDVPR 376
            +D ++T  G RL    +  PL D  +I  RLD++     NP L   ++++LK  PD+ R
Sbjct: 288 LLDRTVTPMGSRLLKRWLLQPLLDKEEIEERLDAVEELKDNPELREKLREMLKKVPDLER 347

Query: 377 SLSRLKIGRGEPKDIAVIRDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQ--SLEKT 434
            LSRL +GR  P+D+  +RD +     I  L        +L   +E ++ L     L + 
Sbjct: 348 LLSRLSLGRASPRDLLRLRDSLEKIPEIFKLLSSLKSESDLLLLLEDIESLDYLAELLEL 407

Query: 435 LSSMLSDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNLKIK 494
           L + +++D P   RDG  +++G +  LDE R L + +K  IA L+L+  E T IK+LKIK
Sbjct: 408 LETAINEDPPLAVRDG-IIKEGYNIELDELRDLLNNAKEWIAKLELEERERTGIKSLKIK 466

Query: 495 HNNNLGYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNATNSA 554
           +N   GY+IEVT S+A ++  D      +I RQT+ N  RFTT EL +LE ++ +A    
Sbjct: 467 YNKVYGYYIEVTKSNAKLVPDD------YIRRQTLKNAERFTTPELKELEEKLLDAEEKI 520

Query: 555 LLIELESFEILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRPIIDNSTNFIV 614
           L +E E F+ L   I+     L   ++ +A +D+  +LA +A EQNY RP   +S +  +
Sbjct: 521 LALEYELFDELREKILAHINELQALAKALAELDVLSSLAEIAAEQNYVRPEFVDSNDLEI 580

Query: 615 KDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIV 674
           K+GRHP+VE  L       F+ ND DLS      + ++ L+TGPNMGGKST+LRQ ALIV
Sbjct: 581 KEGRHPVVEAVLD----NGFVPNDIDLS-----GNRRIILITGPNMGGKSTYLRQVALIV 631

Query: 675 IMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVI 734
           I+AQ+GS+VPA  A IGIVD++F+R+G+AD+LASGRSTFMVEM+ETA+IL+ AT +S VI
Sbjct: 632 ILAQIGSFVPAEKARIGIVDRIFTRIGAADDLASGRSTFMVEMLETANILDNATERSLVI 691

Query: 735 LDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATLQVSD 794
           LDEIGRGT+T DGL+IAWA +EYLHE   CR L ATH+HELT+L + L +  N  +   +
Sbjct: 692 LDEIGRGTSTYDGLAIAWAVLEYLHEKIGCRTLFATHYHELTELEEKLPQVKNYHMSAVE 751

Query: 795 SNEGIIFLHKVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKLYHHNQKDMRLYY 854
               I FL+KV PGIAD SYGI V KLAGLP  VI RA +IL   EK    +  ++    
Sbjct: 752 EGGDITFLYKVKPGIADKSYGIHVAKLAGLPEEVIERAREILAELEKESRSSNLELN--- 808

Query: 855 PEIQTKESKNNLSKNDKLFVEKIKCLNLDEMSPLTALKTLYAVKA 899
                   + +LS   K+ ++ +K L+ DE++P  AL  LY +K 
Sbjct: 809 --------QKDLSLFPKV-LKALKSLDPDELTPR-ALNLLYELKK 843