HHsearch alignment for GI: 254780751 and conserved domain: PRK03987

>PRK03987 translation initiation factor IF-2 subunit alpha; Validated.
Probab=98.12  E-value=1.2e-05  Score=58.37  Aligned_cols=125  Identities=18%  Similarity=0.298  Sum_probs=82.8

Q ss_pred             CCCCCEEEEEEEEECCCCCEEEEEEC--CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             04287879899783638823135327--8977130222137121028988999999988863111110000000111223
Q gi|254780751|r   37 QIKGNIYLAKVTRVEPSLQAAFVDYG--GNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVTI  114 (723)
Q Consensus        37 ~~~GnIY~G~V~~V~p~lqAAFVdiG--~~k~gFL~~~ei~~~y~~ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  114 (723)
T Consensus         6 Pe~g~~v~~~V~~i~~--~Ga~v~l~ey~~~eG~i~isEis~~~v-----------------------------------   48 (262)
T PRK03987          6 PEEGELVVGTVKEVKD--FGAFVTLDEYPGKEGFIHISEVASGWV-----------------------------------   48 (262)
T ss_pred             CCCCCEEEEEEEEEEC--CEEEEEECCCCCCCEEEEHHHCCHHHH-----------------------------------
T ss_conf             9999889999999956--679999356599316788798346775-----------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCC
Q ss_conf             34443344542222334455433222234321122111211000012234444213310688857999840333234564
Q gi|254780751|r  115 PNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGA  194 (723)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kga  194 (723)
T Consensus        49 -----------------------------------------------------~~i~d~~k~G~~v~~kVi~vd------   69 (262)
T PRK03987         49 -----------------------------------------------------KNIRDYVKEGQKVVCKVIRVD------   69 (262)
T ss_pred             -----------------------------------------------------HCHHHHCCCCCEEEEEEEEEC------
T ss_conf             -----------------------------------------------------199985158988999999883------


Q ss_pred             CCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC--CCHHHHHHHHHH-HHHH
Q ss_conf             1012334576523442278875124204688689999999998630025871699850455--757999999999-9999
Q gi|254780751|r  195 AVTTYLSLAGRYSVLMPNTSKGETISRKITNPVDRKNLKEIARGLEVPAGMGVILRTAGAS--RTKIEIKRDFEY-LMRL  271 (723)
Q Consensus       195 ~lT~~isl~Gry~Vl~P~~~~~~~iSrki~~~~~r~~l~~~~~~~~~~~~~G~IiRT~a~~--~~~~~l~~d~~~-L~~~  271 (723)
T Consensus        70 ----------------~~kg-~IdLS~k~Vs~~e~~~~~~~~k~~k---~a~~il~~va~~~~~~~ee~~~~i~~~l~~~  129 (262)
T PRK03987         70 ----------------PKKG-HIDLSLKRVNEHQRREKIQEWKNEQ---KAEKLLELAAEKLGKDLEEAWEEVGYKLEEE  129 (262)
T ss_pred             ----------------CCCC-EEEEECCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             ----------------8788-7871104499899999999999999---9999999999982989899999999999998


Q ss_pred             HHHHHH
Q ss_conf             998776
Q gi|254780751|r  272 WDNVRE  277 (723)
Q Consensus       272 w~~i~~  277 (723)
T Consensus       130 yg~~y~  135 (262)
T PRK03987        130 FGDLYD  135 (262)
T ss_pred             HCCHHH
T ss_conf             560989