HHsearch alignment for GI: 254780751 and conserved domain: PRK06299
>PRK06299 rpsA 30S ribosomal protein S1; Reviewed.
Probab=97.38 E-value=0.00029 Score=48.76 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCC
Q ss_conf 6042878798997836388231353278977130222137
Q gi|254780751|r 36 KQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIH 75 (723)
Q Consensus 36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~ 75 (723)
T Consensus 17 ~~~~G~iV~G~Vv~i~~--~~v~VdiG~K~eG~I~~~E~~ 54 (556)
T PRK06299 17 ELREGSIVKGTVVAIDK--DYVLVDVGLKSEGRIPLEEFK 54 (556)
T ss_pred CCCCCCEEEEEEEEEEC--CEEEEEECCCCEEEEEHHHHC
T ss_conf 78899989999999979--999999688835787999934